BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044988
(538 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225457355|ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 553
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/555 (67%), Positives = 449/555 (80%), Gaps = 20/555 (3%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
MLVEE PAN T +AL + FSLLQ +T K L QIH+QII+NGFSQKN++L KLL+
Sbjct: 1 MLVEEASPAN-LTGLRALQ-QHFFSLLQTCDTIKKLKQIHTQIIVNGFSQKNFLLVKLLS 58
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
FY+TSG L+NAHKVFE+ ENPST +WNQMIRGH++SETP K V LY +M++ E EP+E+T
Sbjct: 59 FYITSGNLLNAHKVFERIENPSTTVWNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFT 118
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFD 180
YSFL+ CAR L REGEQVHGRV+A+GYC+NVF+RT+L+NLY ++GG GV AR +FD
Sbjct: 119 YSFLIGGCARSRLLREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFD 178
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSL 240
++ R++VSWNSLL GYV+ GD+DGA +IFDEMP RNVVSWTTMI+GCAQ G+ +QAL L
Sbjct: 179 EIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHL 238
Query: 241 FNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIH 300
F+EMRRA V LDQVALVAALSACAE+GDLKLG WIHSY++E G +P+LVSLNN+LIH
Sbjct: 239 FHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIH 298
Query: 301 MYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------------- 343
MYASCG I++AY VF MQ+R+T+SWTSMITGFAKQG+A+EAL
Sbjct: 299 MYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPD 358
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
+TF+GVL ACSH GFVD+GR FFECMN+ WGI PRIEHYGCMVDL SRAG +DEA L+
Sbjct: 359 GITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLI 418
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKR 462
++MPMKPNDAV G+LL GCRIH NAELAS VAQKL E+ P+QAAGYL L++NVYA AKR
Sbjct: 419 ESMPMKPNDAVWGALLGGCRIHKNAELASHVAQKLALELKPDQAAGYLVLLSNVYATAKR 478
Query: 463 WQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQ 522
WQDVA VRQKM+++GVRKP G+SWVQINGV+HDFVAGD T+K AS +Y+ L +IT QA
Sbjct: 479 WQDVALVRQKMVEIGVRKPAGRSWVQINGVVHDFVAGDWTHKHASSVYEMLSKITRQAKL 538
Query: 523 EGYKPDISELFLGIE 537
EGYK DISE+ L +E
Sbjct: 539 EGYKLDISEVLLDVE 553
>gi|147817753|emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
Length = 569
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/525 (68%), Positives = 431/525 (82%), Gaps = 18/525 (3%)
Query: 31 NTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMI 90
+T K L QIH+QII+NGFSQKN++L KLL+FY+TSG L+NAHKVFE+ ENPST +WNQMI
Sbjct: 45 DTIKKLKQIHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENPSTTVWNQMI 104
Query: 91 RGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYC 150
RGH++SETP K V LY +M++ E EP+E+TYSFL+ CAR L REGEQVHGRV+A+GYC
Sbjct: 105 RGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSXLLREGEQVHGRVVANGYC 164
Query: 151 SNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIF 210
+NVF+RT+L+NLY ++GG GV AR +FD++ R++VSWNSLL GYV+ GD+DGA +IF
Sbjct: 165 TNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIF 224
Query: 211 DEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLK 270
DEMP RNVVSWTTMI+GCAQ G+ +QAL LF+EMRRA V LDQVALVAALSACAE+GDLK
Sbjct: 225 DEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLK 284
Query: 271 LGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMI 330
LG WIHSY++E G +P+LVSLNN+LIHMYASCG I++AY VF MQ+R+T+SWTSMI
Sbjct: 285 LGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMI 344
Query: 331 TGFAKQGYAQEAL------------------LTFLGVLSACSHGGFVDEGRQFFECMNQN 372
TGFAKQG+A+EAL +TF+GVL ACSH GFVD+GR FFECMN+
Sbjct: 345 TGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKK 404
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQ 432
WGI PRIEHYGCMVDL SRAG +DEA L ++MPMKPNDAV G+LL GCRIH NAELAS
Sbjct: 405 WGIVPRIEHYGCMVDLLSRAGFLDEAHRLXESMPMKPNDAVWGALLGGCRIHKNAELASH 464
Query: 433 VAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGV 492
VAQKLV E+ P+QAAGYL L++NVYA AKRWQDVA VRQKM+++GVRKP G+SWVQINGV
Sbjct: 465 VAQKLVLELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWVQINGV 524
Query: 493 LHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIE 537
+HDFVAGD T+K AS +Y+ L +IT QA EGYK DISE+ L +E
Sbjct: 525 VHDFVAGDWTHKHASSVYEMLSKITRQAKLEGYKLDISEVLLDVE 569
>gi|297733949|emb|CBI15196.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/467 (67%), Positives = 380/467 (81%), Gaps = 18/467 (3%)
Query: 89 MIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASG 148
MIRGH++SETP K V LY +M++ E EP+E+TYSFL+ CAR L REGEQVHGRV+A+G
Sbjct: 1 MIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHGRVVANG 60
Query: 149 YCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWK 208
YC+NVF+RT+L+NLY ++GG GV AR +FD++ R++VSWNSLL GYV+ GD+DGA +
Sbjct: 61 YCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARR 120
Query: 209 IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGD 268
IFDEMP RNVVSWTTMI+GCAQ G+ +QAL LF+EMRRA V LDQVALVAALSACAE+GD
Sbjct: 121 IFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGD 180
Query: 269 LKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTS 328
LKLG WIHSY++E G +P+LVSLNN+LIHMYASCG I++AY VF MQ+R+T+SWTS
Sbjct: 181 LKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTS 240
Query: 329 MITGFAKQGYAQEAL------------------LTFLGVLSACSHGGFVDEGRQFFECMN 370
MITGFAKQG+A+EAL +TF+GVL ACSH GFVD+GR FFECMN
Sbjct: 241 MITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMN 300
Query: 371 QNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELA 430
+ WGI PRIEHYGCMVDL SRAG +DEA L+++MPMKPNDAV G+LL GCRIH NAELA
Sbjct: 301 KKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLGGCRIHKNAELA 360
Query: 431 SQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQIN 490
S VAQKL E+ P+QAAGYL L++NVYA AKRWQDVA VRQKM+++GVRKP G+SWVQIN
Sbjct: 361 SHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWVQIN 420
Query: 491 GVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIE 537
GV+HDFVAGD T+K AS +Y+ L +IT QA EGYK DISE+ L +E
Sbjct: 421 GVVHDFVAGDWTHKHASSVYEMLSKITRQAKLEGYKLDISEVLLDVE 467
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 117/282 (41%), Gaps = 43/282 (15%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
LLA YV G + A ++F++ + W MI G A+ +++++L+ +M + D
Sbjct: 105 LLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLD 164
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV-GCAR 176
+ LS CA G + G +H + + N + +L N + CGV A
Sbjct: 165 QVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAY 224
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
+F M RS +SW S++ G+ A+ G + +
Sbjct: 225 KVFIGMQQRSTISWTSMITGF-------------------------------AKQGHAEE 253
Query: 237 ALSLFNEMRRARVGLDQ-----VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL 291
AL +F M+ R+G D+ + + L AC+ G + G+ H + N G P
Sbjct: 254 ALGVFQWMQ--RLGTDEGRPDGITFIGVLCACSHAGFVDQGR--HFFECMNKKWGIVP-R 308
Query: 292 VSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITG 332
+ ++ + + G ++EA+ + M + N W +++ G
Sbjct: 309 IEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLGG 350
>gi|449487105|ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 297/519 (57%), Positives = 382/519 (73%), Gaps = 21/519 (4%)
Query: 23 IFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPS 82
IFS+L+ + + L +IH+QI+++GFSQKNYIL LL+ Y++ G L +A KVFE PS
Sbjct: 30 IFSVLKSCVSFRNLAKIHAQIVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFEDITAPS 89
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHG 142
T +WNQ+I+GH RS+T +KS+ L+K+M E + +TYSFLLS C R LFREGEQ+HG
Sbjct: 90 TTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREGEQIHG 149
Query: 143 RVLASGYCSNVFIRTNLMNLYLM--SGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKR 200
RVL +GY SN+++RTNL+NLY GG+ + AR LFD+MP +VV WNSLL GYV+R
Sbjct: 150 RVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRARYLFDEMPDSNVVGWNSLLAGYVRR 209
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
GD DGA K+FDEMP RNV +WT M++G AQNG+ + ALSLF++MRRA V LDQVALVAAL
Sbjct: 210 GDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQVALVAAL 269
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
SACAE+GDL LGKWIH YVE + PVLVSLNNALIHMYASCG ++ AY VF ++ +
Sbjct: 270 SACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGVMDLAYKVFEEIPQ 329
Query: 321 RNTVSWTSMITGFAKQGYAQEAL------------------LTFLGVLSACSHGGFVDEG 362
RNTVSW+S+ITGFAKQG EA+ +TF+G L+ACSH G + +G
Sbjct: 330 RNTVSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGALTACSHAGLISDG 389
Query: 363 RQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCR 422
+ F+ M++ +G+ P+IEHYGCMVDL SRAGL+ EA SL+++MPMKPN+AV G+LL GCR
Sbjct: 390 IRLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPNNAVWGALLSGCR 449
Query: 423 IHNNAELASQVAQKLVAEIDP-EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKP 481
+H N E+ S VA+ L EI P QAAGY L+ANVYAA RWQD A VR+ M +GV+KP
Sbjct: 450 LHKNDEIVSHVAKHLSFEIHPNNQAAGYFMLLANVYAADGRWQDTATVRRNMHDIGVKKP 509
Query: 482 PGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQA 520
G+SW++INGVL F+ G+ T+K +LIY+ LG IT Q
Sbjct: 510 SGRSWIEINGVLCSFMVGEETHKDVNLIYEMLGNITRQT 548
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 165/377 (43%), Gaps = 61/377 (16%)
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDM 182
F+ SV C FR ++H +++ SG+ +I +L++LY+ G +G A+ +F+D+
Sbjct: 29 FIFSVLKSCVSFRNLAKIHAQIVVSGFSQKNYILNHLLSLYISFG---SLGSAQKVFEDI 85
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP----HRNVVSWTTMISGCAQNGKSRQAL 238
A S WN ++KG+ + + ++F M N +++ ++S C ++ R+
Sbjct: 86 TAPSTTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREG- 144
Query: 239 SLFNEMRRARVGLD--------QVALVAALSACAEIG--DLKLGKWIHSYVEENFSVGRE 288
E RV ++ + L+ + + G DLK +++ + ++ VG
Sbjct: 145 ----EQIHGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRARYLFDEMPDSNVVGW- 199
Query: 289 PVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF-- 346
N+L+ Y G+ + A VF +M RN +WT M+ GFA+ G + AL F
Sbjct: 200 -------NSLLAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQ 252
Query: 347 -------------LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDL----- 388
+ LSAC+ G + G+ + + W R H +V L
Sbjct: 253 MRRAGVELDQVALVAALSACAELGDLTLGKWIHGYVERTW----RSRHLPVLVSLNNALI 308
Query: 389 --FSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA----EID 442
++ G+MD A+ + + +P + N S++ G A ++ Q ++ E+
Sbjct: 309 HMYASCGVMDLAYKVFEEIPQR-NTVSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVR 367
Query: 443 PEQAAGYLALVANVYAA 459
P++ AL A +A
Sbjct: 368 PDEITFIGALTACSHAG 384
>gi|449439631|ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 295/518 (56%), Positives = 381/518 (73%), Gaps = 21/518 (4%)
Query: 23 IFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPS 82
IFS+L+ + + L + H+QI+++GFSQKNYIL LL+ Y++ G L +A KVFE PS
Sbjct: 30 IFSVLKSCVSFRNLAKTHAQIVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFEDITAPS 89
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHG 142
T +WNQ+I+GH RS+T +KS+ L+K+M E + +TYSFLLS C R LFREGEQ+HG
Sbjct: 90 TTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREGEQIHG 149
Query: 143 RVLASGYCSNVFIRTNLMNLYLM--SGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKR 200
RVL +GY SN+++RTNL+NLY GG+ + A LFD+MP +VV WNSLL GYV+R
Sbjct: 150 RVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRALYLFDEMPDSNVVGWNSLLAGYVRR 209
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
GD DGA K+FDEMP RNV +WT M++G AQNG+ + ALSLF++MRRA V LDQVALVAAL
Sbjct: 210 GDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQVALVAAL 269
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
SACAE+GDL LGKWIH YVE + PVLVSLNNALIHMYASCG ++ AY +F ++ +
Sbjct: 270 SACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGAMDLAYKLFEEIPQ 329
Query: 321 RNTVSWTSMITGFAKQGYAQEAL------------------LTFLGVLSACSHGGFVDEG 362
RNTVSW+S+ITGFAKQG EA+ +TF+G L+ACSH G + +G
Sbjct: 330 RNTVSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGALTACSHAGLISDG 389
Query: 363 RQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCR 422
+ F+ M++ +G+ P+IEHYGCMVDL SRAGL+ EA SL+++MPMKPN+AV G+LL GCR
Sbjct: 390 IRLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPNNAVWGALLSGCR 449
Query: 423 IHNNAELASQVAQKLVAEIDP-EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKP 481
+H N E+ S VA+ L EIDP QAAGY L+ANVYAA RWQD A VR+ M +GV+KP
Sbjct: 450 LHKNDEIVSHVAKHLSFEIDPNNQAAGYFMLLANVYAADGRWQDTATVRRNMHDIGVKKP 509
Query: 482 PGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
G+SW++INGVL F+ G+ T+K +LIY+ LG IT Q
Sbjct: 510 SGRSWIEINGVLCSFMVGEETHKDVNLIYEMLGNITRQ 547
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 163/377 (43%), Gaps = 61/377 (16%)
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDM 182
F+ SV C FR + H +++ SG+ +I +L++LY+ G +G A+ +F+D+
Sbjct: 29 FIFSVLKSCVSFRNLAKTHAQIVVSGFSQKNYILNHLLSLYISFG---SLGSAQKVFEDI 85
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP----HRNVVSWTTMISGCAQNGKSRQAL 238
A S WN ++KG+ + + ++F M N +++ ++S C ++ R+
Sbjct: 86 TAPSTTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREG- 144
Query: 239 SLFNEMRRARVGLD--------QVALVAALSACAEIGDLKLGKWIHSYVE--ENFSVGRE 288
E RV ++ + L+ + + GD L + ++ + E ++ VG
Sbjct: 145 ----EQIHGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRALYLFDEMPDSNVVGW- 199
Query: 289 PVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF-- 346
N+L+ Y G+ + A VF +M RN +WT M+ GFA+ G + AL F
Sbjct: 200 -------NSLLAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQ 252
Query: 347 -------------LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDL----- 388
+ LSAC+ G + G+ + + W R H +V L
Sbjct: 253 MRRAGVELDQVALVAALSACAELGDLTLGKWIHGYVERTW----RSRHLPVLVSLNNALI 308
Query: 389 --FSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA----EID 442
++ G MD A+ L + +P + N S++ G A ++ Q ++ E+
Sbjct: 309 HMYASCGAMDLAYKLFEEIPQR-NTVSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVR 367
Query: 443 PEQAAGYLALVANVYAA 459
P++ AL A +A
Sbjct: 368 PDEITFIGALTACSHAG 384
>gi|356565111|ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 478
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 295/481 (61%), Positives = 357/481 (74%), Gaps = 27/481 (5%)
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE 138
+NP+T +WN +IRG+ARS TP K+V Y M+ + EPD +T+S LLS CAR GL +EGE
Sbjct: 2 DNPTTTVWNHVIRGYARSHTPWKAVECYTHMVSSKAEPDGFTHSSLLSACARGGLVKEGE 61
Query: 139 QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYV 198
QVH VL GYCSNVF+ T+L+ Y G GV AR +FD MP RSVVSWNS+L GYV
Sbjct: 62 QVHATVLVKGYCSNVFVDTSLITFY---AGRGGVERARHVFDGMPQRSVVSWNSMLAGYV 118
Query: 199 KRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVA 258
+ D DGA ++FD MP RNVVSWTTM++GCA+NGKSRQAL LF EMRRA V LDQVALVA
Sbjct: 119 RCADFDGARRVFDVMPCRNVVSWTTMVAGCARNGKSRQALLLFGEMRRACVELDQVALVA 178
Query: 259 ALSACAEIGDLKLGKWIHSYVEENFSVGR--EPVLVSLNNALIHMYASCGEIEEAYGVFR 316
ALSACAE+GDLKLG+WIH YV++ F V R + V LNNALIHMYASCG + EAY VF
Sbjct: 179 ALSACAELGDLKLGRWIHWYVQQRF-VARNWQQPSVRLNNALIHMYASCGILHEAYQVFV 237
Query: 317 KMQRRNTVSWTSMITGFAKQGYAQEAL--------------------LTFLGVLSACSHG 356
KM R++TVSWTSMI FAKQG +EAL +TF+GVL ACSH
Sbjct: 238 KMPRKSTVSWTSMIMAFAKQGLGKEALDLFKTMLSDGVKVDGVRPDEITFIGVLCACSHA 297
Query: 357 GFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGS 416
GFVDEG Q F M WGI P IEHYGCMVDL SRAGL+DEA L++ MP+ PNDA+ G+
Sbjct: 298 GFVDEGHQIFASMKHTWGISPSIEHYGCMVDLLSRAGLLDEARGLIETMPLNPNDAIWGA 357
Query: 417 LLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKM 476
LL GCRIH N+ELASQV KLV E++ +QAAGYL L++N+YA +RWQDV VRQKMI+M
Sbjct: 358 LLGGCRIHRNSELASQVENKLVPELNGDQAAGYLVLLSNIYAFGQRWQDVITVRQKMIEM 417
Query: 477 GVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGI 536
GV+KPPG+SW+QINGV+H+F+AGD T+K +S IY+TL ++T QA EGY +I +FL +
Sbjct: 418 GVKKPPGRSWIQINGVVHNFIAGDMTHKHSSFIYETLRDVTKQANLEGYDREII-VFLDV 476
Query: 537 E 537
E
Sbjct: 477 E 477
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 50/244 (20%)
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
M + W +I G A++ +A+ + M ++ D + LSACA G +K G
Sbjct: 1 MDNPTTTVWNHVIRGYARSHTPWKAVECYTHMVSSKAEPDGFTHSSLLSACARGGLVKEG 60
Query: 273 KWIHS-----------YVEEN---FSVGREPV--------------LVSLNNALIHMYAS 304
+ +H+ +V+ + F GR V +VS N+ L Y
Sbjct: 61 EQVHATVLVKGYCSNVFVDTSLITFYAGRGGVERARHVFDGMPQRSVVSWNSMLAG-YVR 119
Query: 305 CGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF---------------LGV 349
C + + A VF M RN VSWT+M+ G A+ G +++ALL F +
Sbjct: 120 CADFDGARRVFDVMPCRNVVSWTTMVAGCARNGKSRQALLLFGEMRRACVELDQVALVAA 179
Query: 350 LSACSHGGFVDEGRQFFECMNQ-----NWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQN 404
LSAC+ G + GR + Q NW +P + ++ +++ G++ EA+ +
Sbjct: 180 LSACAELGDLKLGRWIHWYVQQRFVARNWQ-QPSVRLNNALIHMYASCGILHEAYQVFVK 238
Query: 405 MPMK 408
MP K
Sbjct: 239 MPRK 242
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/338 (19%), Positives = 124/338 (36%), Gaps = 81/338 (23%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGH---- 93
Q+H+ +++ G+ ++ L+ FY G + A VF+ S WN M+ G+
Sbjct: 62 QVHATVLVKGYCSNVFVDTSLITFYAGRGGVERARHVFDGMPQRSVVSWNSMLAGYVRCA 121
Query: 94 ---------------------------ARSETPEKSVYLYKQMIDKETEPDEYTYSFLLS 126
AR+ +++ L+ +M E D+ LS
Sbjct: 122 DFDGARRVFDVMPCRNVVSWTTMVAGCARNGKSRQALLLFGEMRRACVELDQVALVAALS 181
Query: 127 VCARCGLFREGEQVHGRVLASGYCSN-----VFIRTNLMNLYLMSGGECGV-GCARLLFD 180
CA G + G +H V N V + L+++Y CG+ A +F
Sbjct: 182 ACAELGDLKLGRWIHWYVQQRFVARNWQQPSVRLNNALIHMY----ASCGILHEAYQVFV 237
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSL 240
MP +S VSW S++ + K+ G ++AL L
Sbjct: 238 KMPRKSTVSWTSMIMAFAKQ-------------------------------GLGKEALDL 266
Query: 241 FNEMRRARVGL-----DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
F M V + D++ + L AC+ G + G I + ++ + + +
Sbjct: 267 FKTMLSDGVKVDGVRPDEITFIGVLCACSHAGFVDEGHQIFASMKHTWGISPS---IEHY 323
Query: 296 NALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITG 332
++ + + G ++EA G+ M N W +++ G
Sbjct: 324 GCMVDLLSRAGLLDEARGLIETMPLNPNDAIWGALLGG 361
>gi|224097410|ref|XP_002310922.1| predicted protein [Populus trichocarpa]
gi|222850742|gb|EEE88289.1| predicted protein [Populus trichocarpa]
Length = 554
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 287/474 (60%), Positives = 360/474 (75%), Gaps = 21/474 (4%)
Query: 64 TSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSF 123
++ +L++AH VF+ ++PST +WNQMIR HARS+TP KS+ + QM+ ++ PD +TYSF
Sbjct: 72 SAHHLLSAHYVFKDIQSPSTILWNQMIRAHARSQTPAKSIQFFNQMLLTDSRPDAHTYSF 131
Query: 124 LLSVCARCGLFREGEQVHGRVLASGY-CSNVFIRTNLMNLYL-MSGGE-CGVGCARLLFD 180
LL+ C REG+QVH +VL +GY SNVF+ + L+N Y + GGE + AR +FD
Sbjct: 132 LLAACTSSLSLREGQQVHSKVLTNGYYSSNVFLMSKLVNFYAAVVGGEGAALASARKVFD 191
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSL 240
DM R+VV WNS+L GY++RG++DGA +IF EMP RNVVSWTTMISG A+NGK +QAL+L
Sbjct: 192 DMSERNVVCWNSMLAGYMRRGNLDGARRIFYEMPERNVVSWTTMISGYAKNGKCKQALNL 251
Query: 241 FNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIH 300
F++MR+A V LDQV L+AAL+ACAE+GDLK+G WIHSY+++ F + VLVSLNNALIH
Sbjct: 252 FDQMRKAGVELDQVVLLAALTACAELGDLKMGMWIHSYIQDTFVGSNQRVLVSLNNALIH 311
Query: 301 MYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------------- 343
MYASCG I+EAY VFR M R+ VSWTS+IT FAKQGYAQ L
Sbjct: 312 MYASCGMIDEAYEVFRWMPERSAVSWTSLITAFAKQGYAQAVLEIFRSMQRLGTSEARPD 371
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
+TF+GVL ACSH G VDEGRQ F+ M Q WGIKPRIEHYGCMVDL SRAG +DEA L+
Sbjct: 372 GITFIGVLCACSHAGLVDEGRQLFKDMIQRWGIKPRIEHYGCMVDLLSRAGFLDEAQELI 431
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKR 462
MP+KPN+AV G+LL GCR + NAELAS V+QKLVAE DP++AAGYL+L+A VYA+A++
Sbjct: 432 ATMPVKPNNAVWGALLGGCRFYRNAELASLVSQKLVAEPDPDKAAGYLSLLAQVYASAEK 491
Query: 463 WQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEI 516
WQDVA VRQKM+ MGV+KP GQSWVQIN V HD VAGD T++ S IY+ LG+I
Sbjct: 492 WQDVATVRQKMVAMGVKKPAGQSWVQINEVFHDSVAGDRTHENTSSIYEMLGKI 545
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 103/252 (40%), Gaps = 45/252 (17%)
Query: 38 QIHSQIIINGFSQKN-YILAKLLAFYVT-----SGYLINAHKVFEKTENPSTAIWNQMIR 91
Q+HS+++ NG+ N ++++KL+ FY L +A KVF+ + WN M+
Sbjct: 147 QVHSKVLTNGYYSSNVFLMSKLVNFYAAVVGGEGAALASARKVFDDMSERNVVCWNSMLA 206
Query: 92 GHARS-----------ETPEKSVY--------------------LYKQMIDKETEPDEYT 120
G+ R E PE++V L+ QM E D+
Sbjct: 207 GYMRRGNLDGARRIFYEMPERNVVSWTTMISGYAKNGKCKQALNLFDQMRKAGVELDQVV 266
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLF 179
L+ CA G + G +H + + SN + +L N + CG + A +F
Sbjct: 267 LLAALTACAELGDLKMGMWIHSYIQDTFVGSNQRVLVSLNNALIHMYASCGMIDEAYEVF 326
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV-------VSWTTMISGCAQNG 232
MP RS VSW SL+ + K+G +IF M +++ ++ C+ G
Sbjct: 327 RWMPERSAVSWTSLITAFAKQGYAQAVLEIFRSMQRLGTSEARPDGITFIGVLCACSHAG 386
Query: 233 KSRQALSLFNEM 244
+ LF +M
Sbjct: 387 LVDEGRQLFKDM 398
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/523 (42%), Positives = 322/523 (61%), Gaps = 26/523 (4%)
Query: 22 QIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVT--SGYLINAHKVFEKTE 79
Q LLQ + + L QIH Q++ G +KLLAF + SG L A VF++
Sbjct: 20 QTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIF 79
Query: 80 NPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
P+T +WN MIRG++ S+ PE+++ LY M+ + YT+ FLL C+ E +Q
Sbjct: 80 RPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQ 139
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVK 199
+H ++ G+ S ++ +L+N+Y SG + ARLLFD + R VSWNS++ GY K
Sbjct: 140 IHAHIIKMGFGSEIYTTNSLLNVYSKSGD---IKSARLLFDQVDQRDTVSWNSMIDGYTK 196
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
G+I+ A++IF+ MP RN++SWT+MISGC GK ++AL+LF+ M+ A + LD VALV+
Sbjct: 197 CGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVST 256
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
L ACA++G L GKWIH+Y++++ + +P+ L LI MYA CG++EEA VFRKM+
Sbjct: 257 LQACADLGVLDQGKWIHAYIKKH-EIEIDPI---LGCVLIDMYAKCGDLEEAIEVFRKME 312
Query: 320 RRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQ 364
+ WT+MI+G+A G +EAL +TF G+L+ACSH G V E +
Sbjct: 313 EKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKL 372
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
FE M + G KP IEHYGCMVDL RAGL+ EA L++NMP+KPN A+ G+LL C IH
Sbjct: 373 LFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIH 432
Query: 425 NNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQ 484
N EL Q+ K++ ++DP Y+ L A+++AAA W A VR++M + GV K PG
Sbjct: 433 GNLELGKQIG-KILIQVDPGHGGRYIHL-ASIHAAAGEWNQAARVRRQMKEQGVSKLPGC 490
Query: 485 SWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
S + +NG H+F+AGD ++ Q I L +I + +EGYKP
Sbjct: 491 SVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKP 533
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/523 (42%), Positives = 322/523 (61%), Gaps = 26/523 (4%)
Query: 22 QIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVT--SGYLINAHKVFEKTE 79
Q LLQ + + L QIH Q++ G +KLLAF + SG L A VF++
Sbjct: 20 QTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIF 79
Query: 80 NPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
P+T +WN MIRG++ S+ PE+++ LY M+ + YT+ FLL C+ E +Q
Sbjct: 80 RPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQ 139
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVK 199
+H ++ G+ S ++ +L+N+Y SG + ARLLFD + R VSWNS++ GY K
Sbjct: 140 IHAHIIKMGFGSEIYTTNSLLNVYSKSGD---IKSARLLFDQVDQRDTVSWNSMIDGYTK 196
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
G+I+ A++IF+ MP RN++SWT+MISGC GK ++AL+LF+ M+ A + LD VALV+
Sbjct: 197 CGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVST 256
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
L ACA++G L GKWIH+Y++++ + +P+ L LI MYA CG++EEA VFRKM+
Sbjct: 257 LQACADLGVLDQGKWIHAYIKKH-EIEIDPI---LGCVLIDMYAKCGDLEEAIEVFRKME 312
Query: 320 RRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQ 364
+ WT+MI+G+A G +EAL +TF G+L+ACSH G V E +
Sbjct: 313 EKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKL 372
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
FE M + G KP IEHYGCMVDL RAGL+ EA L++NMP+KPN A+ G+LL C IH
Sbjct: 373 LFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIH 432
Query: 425 NNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQ 484
N EL Q+ K++ ++DP Y+ L A+++AAA W A VR++M + GV K PG
Sbjct: 433 GNLELGKQIG-KILIQVDPGHGGRYIHL-ASIHAAAGEWNQAARVRRQMKEQGVSKLPGC 490
Query: 485 SWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
S + +NG H+F+AGD ++ Q I L +I + +EGYKP
Sbjct: 491 SVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKP 533
>gi|224111954|ref|XP_002332852.1| predicted protein [Populus trichocarpa]
gi|222837177|gb|EEE75556.1| predicted protein [Populus trichocarpa]
Length = 331
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/322 (65%), Positives = 251/322 (77%), Gaps = 18/322 (5%)
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
MP RNVVSWTTMISG A+NGK +QAL+LF++MR+A V LDQV L+AAL+ACAE+GDLK+G
Sbjct: 1 MPERNVVSWTTMISGYAKNGKCKQALNLFDQMRKAGVELDQVVLLAALTACAELGDLKMG 60
Query: 273 KWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
WIHSY+++ F + VLVSLNNALIHMYASCG I+EAY VFR M R+ VSWTS+IT
Sbjct: 61 MWIHSYIQDTFVGSNQRVLVSLNNALIHMYASCGMIDEAYEVFRWMPERSAVSWTSLITA 120
Query: 333 FAKQGYAQEAL------------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWG 374
FAKQGYAQ L +TF+GVL ACSH G VDEGRQ F+ M Q WG
Sbjct: 121 FAKQGYAQAVLEIFRSMQRLGTSEARPDGITFIGVLCACSHAGLVDEGRQLFKDMIQRWG 180
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVA 434
IKPRIEHYGCMVDL SRAG +DEA L+ MP+KPN+AV G+LL GCR + NAELAS V+
Sbjct: 181 IKPRIEHYGCMVDLLSRAGFLDEAQELIATMPVKPNNAVWGALLGGCRFYRNAELASLVS 240
Query: 435 QKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLH 494
QKLVAE DP++AAGYL+L+A VYA+A++WQDVA VRQKM+ MGV+KP GQSWVQIN V+H
Sbjct: 241 QKLVAEPDPDKAAGYLSLLAQVYASAEKWQDVATVRQKMVAMGVKKPAGQSWVQINEVVH 300
Query: 495 DFVAGDSTYKQASLIYKTLGEI 516
D V+ D T+K S IY+ LG+I
Sbjct: 301 DSVSVDKTHKNTSSIYEMLGKI 322
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 111/251 (44%), Gaps = 37/251 (14%)
Query: 86 WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVL 145
W MI G+A++ ++++ L+ QM E D+ L+ CA G + G +H
Sbjct: 9 WTTMISGYAKNGKCKQALNLFDQMRKAGVELDQVVLLAALTACAELGDLKMGMWIHS--- 65
Query: 146 ASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDG 205
Y + F+ +N L ++ N+L+ Y G ID
Sbjct: 66 ---YIQDTFVGSNQRVLVSLN------------------------NALIHMYASCGMIDE 98
Query: 206 AWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR---ARVGLDQVALVAALSA 262
A+++F MP R+ VSWT++I+ A+ G ++ L +F M+R + D + + L A
Sbjct: 99 AYEVFRWMPERSAVSWTSLITAFAKQGYAQAVLEIFRSMQRLGTSEARPDGITFIGVLCA 158
Query: 263 CAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RR 321
C+ G + G+ + + + + G +P + ++ + + G ++EA + M +
Sbjct: 159 CSHAGLVDEGRQLFKDMIQRW--GIKP-RIEHYGCMVDLLSRAGFLDEAQELIATMPVKP 215
Query: 322 NTVSWTSMITG 332
N W +++ G
Sbjct: 216 NNAVWGALLGG 226
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMI---DKET 114
L+ Y + G + A++VF S W +I A+ + + +++ M E
Sbjct: 86 LIHMYASCGMIDEAYEVFRWMPERSAVSWTSLITAFAKQGYAQAVLEIFRSMQRLGTSEA 145
Query: 115 EPDEYTYSFLLSVCARCGLFREGEQV 140
PD T+ +L C+ GL EG Q+
Sbjct: 146 RPDGITFIGVLCACSHAGLVDEGRQL 171
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/536 (39%), Positives = 321/536 (59%), Gaps = 24/536 (4%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEK 77
L R LL + L Q+H+ ++ + L+++ + + A +F+
Sbjct: 13 LHHRPSTHLLHNFTSPFELKQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQL 72
Query: 78 TENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+ WN +R A ++P ++ L+ ++ + + PD YT SF+L C+R R G
Sbjct: 73 LDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNG 132
Query: 138 EQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGY 197
+ VHG V G SN+F++ +++LY + G +G AR +FD MP R V++WN ++
Sbjct: 133 KIVHGYVEKLGLQSNMFLQNMIVHLYALCGE---IGVARKVFDKMPQRDVITWNIMIARL 189
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
VK GD +GA+K+F EMP RNV SWT+MI G AQ GKS++A+ LF EM A + ++V +V
Sbjct: 190 VKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVV 249
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
A L ACA++G+L LG+ IH + + G E + + N LI MY CG +E+A +F
Sbjct: 250 AVLVACADMGNLVLGRRIHDFSNRS---GYEKN-IRVCNTLIDMYVKCGCLEDACRIFDN 305
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEG 362
M+ R VSW++MI G A G A++AL +TF+G+L ACSH G V++G
Sbjct: 306 MEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKG 365
Query: 363 RQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCR 422
R++F M +++GI PRIEHYGCMVDLFSRAGL+ EA + NMP+ PN V G+LL GC+
Sbjct: 366 RKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCK 425
Query: 423 IHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPP 482
+H N +LA + + L +++DP GY +++N+YA A RW+DVA VR+ M GV+K P
Sbjct: 426 VHKNIKLAEEATRHL-SKLDPLN-DGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTP 483
Query: 483 GQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
G S + + GV+++FVAGD T+ Q I++T ++ + +GY P+ S + L +EE
Sbjct: 484 GWSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVPNTSVVLLDMEE 539
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/533 (38%), Positives = 318/533 (59%), Gaps = 27/533 (5%)
Query: 22 QIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS---GYLINAHKVFEKT 78
+ S LQ + + L QIH++++ G Q +Y + K L+F ++S +L A VF+
Sbjct: 16 ETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGF 75
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE 138
+ P T +WN MIRG + S+ PE+S+ LY++M+ + YT+ LL C+ F E
Sbjct: 76 DRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETT 135
Query: 139 QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYV 198
Q+H ++ GY ++V+ +L+N Y ++G A LLFD +P VSWNS++KGYV
Sbjct: 136 QIHAQITKLGYENDVYAVNSLINSYAVTGN---FKLAHLLFDRIPEPDDVSWNSVIKGYV 192
Query: 199 KRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVA 258
K G +D A +F +M +N +SWTTMISG Q +++AL LF+EM+ + V D V+L
Sbjct: 193 KAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLAN 252
Query: 259 ALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM 318
ALSACA++G L+ GKWIHSY+ + R + L LI MYA CGE+EEA VF+ +
Sbjct: 253 ALSACAQLGALEQGKWIHSYLNKT----RIRMDSVLGCVLIDMYAKCGEMEEALEVFKNI 308
Query: 319 QRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGR 363
++++ +WT++I+G+A G+ +EA+ +TF VL+ACS+ G V+EG+
Sbjct: 309 KKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGK 368
Query: 364 QFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRI 423
F M +++ +KP IEHYGC+VDL RAGL+DEA +Q MP+KPN + G+LL CRI
Sbjct: 369 LIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRI 428
Query: 424 HNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPG 483
H N EL ++ + L+A IDP Y+ AN++A K+W A R+ M + GV K PG
Sbjct: 429 HKNIELGEEIGEILIA-IDPYHGGRYVH-KANIHAMDKKWDKAAETRRLMKEQGVAKVPG 486
Query: 484 QSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGI 536
S + + G H+F+AGD ++ + I + + + GY P++ E+ L +
Sbjct: 487 CSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDL 539
>gi|356495396|ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 516
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/508 (38%), Positives = 302/508 (59%), Gaps = 26/508 (5%)
Query: 20 TRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHK--VFEK 77
T Q +LL+ + K L QIH Q++ G + ++ LL Y + A+ VF+
Sbjct: 10 TEQTQALLERCSNMKELMQIHGQLLKKGTIRNQLTVSTLLVSYARIELVNLAYTRVVFDS 69
Query: 78 TENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+P+T IWN M+R ++ S PE ++ LY QM+ + YT+ FLL C+ F E
Sbjct: 70 ISSPNTVIWNTMLRAYSNSNDPEAALLLYHQMLHNSVPHNSYTFPFLLKACSALSAFEET 129
Query: 138 EQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGY 197
+Q+H ++ G+ V+ +L+ +Y +SG + A +LF+ +P R +VSWN ++ GY
Sbjct: 130 QQIHAHIIKRGFGLEVYATNSLLRVYAISGN---IQSAHVLFNQLPTRDIVSWNIMIDGY 186
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
+K G++D A+KIF MP +NV+SWTTMI G + G ++ALSL +M A + D + L
Sbjct: 187 IKFGNLDMAYKIFQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQQMLVAGIKPDSITLS 246
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
+LSACA +G L+ GKWIH+Y+E+N + +PV L L MY CGE+E+A VF K
Sbjct: 247 CSLSACAGLGALEQGKWIHTYIEKN-EIKIDPV---LGCVLTDMYVKCGEMEKALLVFSK 302
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEG 362
++++ +WT++I G A G +EAL +TF +L+ACSH G +EG
Sbjct: 303 LEKKCVCAWTAIIGGLAIHGKGREALDWFTQMQKAGINPNSITFTAILTACSHAGLTEEG 362
Query: 363 RQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCR 422
+ FE M+ + IKP +EHYGCMVDL RAGL+ EA +++MP+KPN A+ G+LL C+
Sbjct: 363 KSLFESMSSVYNIKPSMEHYGCMVDLMGRAGLLKEAREFIESMPVKPNAAIWGALLNACQ 422
Query: 423 IHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPP 482
+H + EL ++ K++ E+DP+ + Y+ L A++YAAA W V VR ++ G+ P
Sbjct: 423 LHKHFELGKEIG-KILIELDPDHSGRYIHL-ASIYAAAGEWNQVVRVRSQIKHRGLLNHP 480
Query: 483 GQSWVQINGVLHDFVAGDSTYKQASLIY 510
G S + +NGV+H+F AGD ++ IY
Sbjct: 481 GCSSITLNGVVHEFFAGDGSHPHIQEIY 508
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/536 (39%), Positives = 316/536 (58%), Gaps = 34/536 (6%)
Query: 24 FSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKL---LAFYVTSGYLINAHKVFEKTEN 80
LL+ N+ L Q+H+QII L ++ AF + Y A ++FE E
Sbjct: 32 IDLLRNFNSPFELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHY---AQQIFECVEK 88
Query: 81 --PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE 138
P T +WN ++ A ++P ++ L+ ++ + PD +T S +L C G
Sbjct: 89 QKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGR 148
Query: 139 QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGY 197
+HG V G+ SN++++ +++LY CG +G ARLLF+ MP R VV+WN ++
Sbjct: 149 ILHGVVEKVGFRSNLYLQNMIVHLY----ASCGEMGEARLLFEKMPQRDVVTWNIMIAQL 204
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
+K+GD +GA+ +F MP RNV SWT+MI+G Q GK+++A+ LF +M A V ++V +V
Sbjct: 205 IKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVV 264
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
A L+ACA++G L LG IH Y + R V ++N LI MY CG +EEA VF +
Sbjct: 265 AVLAACADLGALDLGMRIHEYSNRH-GFKRN---VRISNTLIDMYVKCGCLEEACKVFEE 320
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEG 362
M+ R VSW++MI G A G A+EAL +TF+G+L ACSH G + EG
Sbjct: 321 MEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEG 380
Query: 363 RQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCR 422
R+FF M +++GI P+IEHYGCMVDL SRAGL+ EA + NMPMKPN V G+LL CR
Sbjct: 381 RRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACR 440
Query: 423 IHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPP 482
+H N E+A + + L+ E+DP GY +++N+YA A RW+D A VR+ M V+K P
Sbjct: 441 VHKNVEMAEEAIKHLL-ELDPLN-DGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTP 498
Query: 483 GQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
G S + ++GV+H+FVAG+ ++ I++ E+ + +GY P+ S + L IEE
Sbjct: 499 GWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEE 554
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/561 (37%), Positives = 317/561 (56%), Gaps = 43/561 (7%)
Query: 12 ATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLI 69
+ S +T SL + + L QIHS+ I G I K+L+F + G +
Sbjct: 6 CSQSSPVTENPPLSLFETCKSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMC 65
Query: 70 NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
A ++F+ PS WN M +G++R P+ V LY +M+++ +PD YTY FL
Sbjct: 66 YARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFT 125
Query: 130 RCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVS 189
R + G ++H V+ G SNVF L+N+Y + G + AR +FD VV+
Sbjct: 126 RSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGL---IDMARGIFDMSCKSDVVT 182
Query: 190 WNSLLKGY-----------------VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNG 232
WN+++ GY V G +D A K F +MP R+ VSWT MI G +
Sbjct: 183 WNAMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLN 242
Query: 233 KSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLV 292
++AL LF EM+ +++ D+ +V+ L+ACA++G L+LG+WI +Y+++N V + +
Sbjct: 243 CYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKN-KVKNDTFV- 300
Query: 293 SLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------- 343
NALI MY CG +E A +F + +R+ +WT+M+ G A G +EAL
Sbjct: 301 --GNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKA 358
Query: 344 ------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDE 397
+T++GVLSAC+H G VDEG++FF M GI+P I HYGCMVDL +AG + E
Sbjct: 359 SVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKE 418
Query: 398 AFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVY 457
A +++NMPMKPN V G+LL CRIH +AE+A + ++++ E++P A Y+ L N+Y
Sbjct: 419 AHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQIL-ELEPNNGAVYV-LQCNIY 476
Query: 458 AAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEIT 517
AA +W + +RQ M+ G++K PG S +++NG++H+FVAGD ++ Q IY L ++T
Sbjct: 477 AACNKWDKLRELRQVMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMT 536
Query: 518 MQAMQEGYKPDISELFLGIEE 538
GY P+ SE+FL I E
Sbjct: 537 SDLKIAGYSPNTSEVFLDIAE 557
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/533 (39%), Positives = 314/533 (58%), Gaps = 30/533 (5%)
Query: 25 SLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKL---LAFYVTSGYLINAHKVFEKTENP 81
LL+ N+ L Q+H+QII L ++ AF + Y K EK + P
Sbjct: 33 DLLRNFNSPFELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEK-QKP 91
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVH 141
T +WN ++ A ++P ++ L+ ++ + PD +T S +L C G +H
Sbjct: 92 ETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILH 151
Query: 142 GRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKR 200
G V G+ SN++++ +++LY CG +G ARLLF+ MP R VV+WN ++ +K+
Sbjct: 152 GVVEKVGFRSNLYLQNMIVHLY----ASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQ 207
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
GD +GA+ +F MP RNV SWT+MI+G Q GK+++A+ LF +M A V ++V +VA L
Sbjct: 208 GDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVL 267
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
+ACA++G L LG IH Y + R V ++N LI MY CG +EEA VF +M+
Sbjct: 268 AACADLGALDLGMRIHEYSNRH-GFKRN---VRISNTLIDMYVKCGCLEEACKVFEEMEE 323
Query: 321 RNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQF 365
R VSW++MI G A G A+EAL +TF+G+L ACSH G + EGR+F
Sbjct: 324 RTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRF 383
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHN 425
F M +++GI P+IEHYGCMVDL SRAGL+ EA + NMPMKPN V G+LL CR+H
Sbjct: 384 FASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHK 443
Query: 426 NAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQS 485
N E+A + + L+ E+DP GY +++N+YA A RW+D A VR+ M V+K PG S
Sbjct: 444 NVEMAEEAIKHLL-ELDPLN-DGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWS 501
Query: 486 WVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ ++GV+H+FVAG+ ++ I++ E+ + +GY P+ S + L IEE
Sbjct: 502 SITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEE 554
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/529 (39%), Positives = 315/529 (59%), Gaps = 33/529 (6%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY--LINAHKVFEKTENPSTAIWNQMIR 91
K +I SQ+I+ GF + ++LL F S + L + ++F++ EN + +WN M+R
Sbjct: 43 KQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMR 102
Query: 92 GHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCS 151
+ +S + EK++ LYK M+ PD YTY ++ CA L G+++H VL G+ S
Sbjct: 103 AYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDS 162
Query: 152 NVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDG---AWK 208
+V+++ L+N+Y + G + AR LFD+ P VSWNS+L GYVK+GD+ AWK
Sbjct: 163 DVYVQNTLINMYAVCGN---MRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWK 219
Query: 209 IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGD 268
+F+EM +++VSW+ +ISG QNG +AL +F EM + LD+V +V+ LSACA +
Sbjct: 220 LFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSI 279
Query: 269 LKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYAS----CGEIEEAYGVFRKMQRRNTV 324
+K GK IH V +G E V+L NALIHMY+ CG +E A VF M+ +
Sbjct: 280 VKTGKMIHGLV---IRMGIES-YVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVS 335
Query: 325 SWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECM 369
SW ++I G A G + +L +TF+GVL AC H G VDEGR F M
Sbjct: 336 SWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASM 395
Query: 370 NQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAEL 429
+ GI+P ++HYGCMVDL RAGL++EA L+++MPM P+ A G+LL C+ H + E+
Sbjct: 396 IEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEM 455
Query: 430 ASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQI 489
+V +KL+ E+ P+ G+ L++N++A+ W+DV VR M + GV K PG S ++
Sbjct: 456 GERVGRKLI-ELQPDH-DGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEA 513
Query: 490 NGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
NGV+H+F+AGD T+ + + L E+ + EGY PD +E+ L I+E
Sbjct: 514 NGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDE 562
>gi|225435834|ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
[Vitis vinifera]
Length = 576
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/515 (37%), Positives = 306/515 (59%), Gaps = 26/515 (5%)
Query: 22 QIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENP 81
+ SLL+ + K L Q H ++ G Q N +L++ + + G+ +H +F P
Sbjct: 43 HLLSLLKQCSNLKHLHQTHCFMLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHKTRP 102
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVH 141
++N +I+ + E +++ LY +++ + D Y+ F+L R G Q+H
Sbjct: 103 DIYLYNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIH 162
Query: 142 GRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKR 200
+ + +G S++ + T L+ +Y CG V AR LFD + R V WN+++ GY K
Sbjct: 163 CQAIGTGLVSDIHVVTALIQMY----SSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKV 218
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
GD+D A +F+ MP RNV+SWT +I+G AQ + +A+++F M+ V D++A++AAL
Sbjct: 219 GDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAAL 278
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
SACA +G L+LG+WIH+Y++++ G + V LNNALI MYA CG+IE+A VF+ M+
Sbjct: 279 SACAHLGALELGEWIHNYIDKH---GLSKI-VPLNNALIDMYAKCGKIEKALEVFKNMEH 334
Query: 321 RNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQF 365
++ ++WTSMI G A G +EAL +TF+ +LSAC H G V+ GR +
Sbjct: 335 KSVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWY 394
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHN 425
F+CM +GIKP+I+HYGCM+DL RAG + EA LV+ MP + N + GSLL RIH
Sbjct: 395 FKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHG 454
Query: 426 NAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQS 485
+AEL Q Q L+ +++P + Y L++N+YA +W + VR+ M GV+K PG S
Sbjct: 455 DAELGKQALQHLI-KVEPHNSGNY-TLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGS 512
Query: 486 WVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQA 520
+++N +H+FVAGD + Q+ I++ L +I +Q+
Sbjct: 513 CIEVNNRVHEFVAGDKLHPQSERIFEVLCKINLQS 547
>gi|147774372|emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
Length = 576
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/515 (37%), Positives = 306/515 (59%), Gaps = 26/515 (5%)
Query: 22 QIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENP 81
+ SLL+ + K L Q H ++ G Q N +L++ + + G+ +H +F P
Sbjct: 43 HLLSLLKQCSNLKHLHQTHCFMLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHKTRP 102
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVH 141
++N +I+ + E +++ LY +++ + D Y+ F+L R G Q+H
Sbjct: 103 DIYLYNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIH 162
Query: 142 GRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKR 200
+ + +G S++ + T L+ +Y CG V AR LFD + R V WN+++ GY K
Sbjct: 163 CQAIGTGLVSDIHVVTALIQMY----SSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKV 218
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
GD+D A +F+ MP RNV+SWT +I+G AQ + +A+++F M+ V D++A++AAL
Sbjct: 219 GDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAAL 278
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
SACA +G L+LG+WIH+Y++++ G + V LNNALI MYA CG+IE+A VF+ M+
Sbjct: 279 SACAHLGALELGEWIHNYIDKH---GLSKI-VPLNNALIDMYAKCGKIEKALEVFKNMEH 334
Query: 321 RNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQF 365
++ ++WTSMI G A G +EAL +TF+ +LSAC H G V+ GR +
Sbjct: 335 KSVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWY 394
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHN 425
F+CM +GIKP+I+HYGCM+DL RAG + EA LV+ MP + N + GSLL RIH
Sbjct: 395 FKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHG 454
Query: 426 NAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQS 485
+AEL Q Q L+ +++P + Y L++N+YA +W + VR+ M GV+K PG S
Sbjct: 455 DAELGKQALQHLI-KVEPHNSGNY-TLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGS 512
Query: 486 WVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQA 520
+++N +H+FVAGD + Q+ I++ L +J +Q+
Sbjct: 513 CIEVNNRVHEFVAGDKLHPQSERIFEVLCKJNLQS 547
>gi|357483509|ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/510 (38%), Positives = 302/510 (59%), Gaps = 26/510 (5%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY--LINAHKVF 75
L Q SLL+ + L QIH Q++ G + +++LL Y + + L A VF
Sbjct: 9 LNVEQTMSLLERCSNIGELKQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVF 68
Query: 76 EKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFR 135
++ +P+T +WN MIR ++ S PE+++ LY QM+ + YT+ FLL C+
Sbjct: 69 DRISSPNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALA 128
Query: 136 EGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLK 195
E Q+H +++ G+ S V+ +L+ +Y +SG + A +LFD +P+R +VSWN+++
Sbjct: 129 ETHQIHVQIIKRGFGSEVYATNSLLRVYAISGS---IKSAHVLFDLLPSRDIVSWNTMID 185
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVA 255
GY+K G+++ A+KIF MP +NV+SWT+MI G + G ++AL L +M A + D++
Sbjct: 186 GYIKCGNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKIT 245
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
L +LSACA +G L+ GKWIH+Y+ +N + +PV L ALI MY CGE+++A VF
Sbjct: 246 LSCSLSACAGLGALEQGKWIHTYIGKN-KIKIDPV---LGCALIDMYVKCGEMKKALLVF 301
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVD 360
K++++ +WT++I GFA G EAL TF VL+ACSH G V+
Sbjct: 302 SKLEKKCVYTWTAIIGGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVE 361
Query: 361 EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
EG+ FE M+ + +KP +EHYGCMVDL RAG + EA V++MP+KPN A+ GSLL
Sbjct: 362 EGKSLFESMSTFYNMKPVMEHYGCMVDLLGRAGFLKEAKEFVESMPIKPNAAIWGSLLNA 421
Query: 421 CRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRK 480
C +H + EL ++ + L+ E+DPE Y+ L A+++AAA W + + VR + G+
Sbjct: 422 CHLHKHLELGKEIGKFLI-ELDPEHDGRYIHL-ASIHAAAGEWDEASQVRSHIKNKGLLN 479
Query: 481 PPGQSWVQINGVLHDFVAGDSTYKQASLIY 510
PG S + +NGV H+F AG + +Y
Sbjct: 480 LPGCSTITLNGVAHEFFAGAEPHPHVREMY 509
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/536 (37%), Positives = 320/536 (59%), Gaps = 33/536 (6%)
Query: 26 LLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI 85
L Q N+ K L +H+ ++ G + +Y+L K+L F G +H++F +T+ P+ +
Sbjct: 16 LFQGFNSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFL 75
Query: 86 WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVL 145
+N MI G +++ ++S+ +Y M + PD +T+ FLL CAR + G ++HG V+
Sbjct: 76 FNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVV 135
Query: 146 ASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGD-- 202
+G S+ F+ T+L++LY G+CG + A +FDD+P ++V +W +++ GY+ G
Sbjct: 136 KAGCESDAFVNTSLVSLY----GKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCR 191
Query: 203 --ID---GAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
ID A +FD M +++VSW++MI G A NG ++AL LF +M D A+V
Sbjct: 192 EAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMV 251
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
L ACA +G L+LG W + ++ N +G PVL ALI MYA CG ++ A+ VFR
Sbjct: 252 GVLCACARLGALELGNWASNLMDRNEFLGN-PVL---GTALIDMYAKCGRMDSAWEVFRG 307
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEG 362
M++++ V W + I+G A G+ + A TF+G+L AC+H G VDEG
Sbjct: 308 MRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEG 367
Query: 363 RQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCR 422
RQ+F M + + + P IEHYGCMVDL RAG +DEA LV++MPM+ N V G+LL GCR
Sbjct: 368 RQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCR 427
Query: 423 IHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPP 482
+H + +L V ++L+A ++P + Y+ L++N+Y+A+ +W+D A +R M + G++K P
Sbjct: 428 LHRDTQLVEGVLKQLIA-LEPSNSGNYV-LLSNIYSASHKWEDAAKIRSIMSERGIKKVP 485
Query: 483 GQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
G SW++++GV+H+F+ GD+++ + IY LGE+ GY P + IEE
Sbjct: 486 GYSWIEVDGVVHEFLVGDTSHPLSEKIYAKLGELVKDLKASGYVPTTDYVLFDIEE 541
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/530 (38%), Positives = 314/530 (59%), Gaps = 26/530 (4%)
Query: 24 FSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVF-EKTENPS 82
S LQ T L QIH++++ +G Q Y + K L+F ++S + AH VF + P
Sbjct: 15 LSCLQKCPTEVELKQIHARMLKSGLLQDPYAMTKFLSFCLSSSFSSYAHDVFFNGFDRPD 74
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHG 142
T +WN MIRG + S+ P++S+ LY +M+ + YT+ FLL C+ F+E Q+H
Sbjct: 75 TFLWNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQIHA 134
Query: 143 RVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGD 202
+ GY +++ +L+N Y ++G A LLFD + VSWNS++KGYVK G+
Sbjct: 135 HITKFGYGHDIYAVNSLINSYAVTGN---FKHAHLLFDRIQEPDAVSWNSVIKGYVKAGE 191
Query: 203 IDGAWKIFDEMPHRN-VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALS 261
+D A +F +MP +N +SWTTMISG Q G +++AL LF+EM+ + V D V+L +ALS
Sbjct: 192 MDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALS 251
Query: 262 ACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR 321
AC+++G L+ GKWIHSY + R + L LI MYA CGE+EEA GVF+ M+ +
Sbjct: 252 ACSQLGALEQGKWIHSYANKT----RTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTK 307
Query: 322 NTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFF 366
+ WT++I+G+A G +EA+ +TF VL+ACS+ G V+EG+ F
Sbjct: 308 SVQVWTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVF 367
Query: 367 ECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNN 426
+ +++ +KP IEHYGCMVDL RAGL++EA +Q MP+KPN + GSLL C+IH N
Sbjct: 368 NTIERDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKN 427
Query: 427 AELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSW 486
EL ++ + L+ E+D Y+ + AN++A K+W A R+ M + GV K PG S
Sbjct: 428 IELGEKIGEILI-EMDSNHGGRYVHM-ANIHAMGKKWDKAAETRRLMREQGVVKVPGCSA 485
Query: 487 VQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGI 536
+ + G H+F+AGD ++ + I + + + GY P++ ++ L +
Sbjct: 486 ISLEGTTHEFLAGDRSHAEIQEIRTKWRFVRRKLEENGYVPELEDMLLDL 535
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/550 (37%), Positives = 309/550 (56%), Gaps = 31/550 (5%)
Query: 10 NPA--TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS-- 65
NP + + L I L T K L QIH+Q I G N++ +++L+F S
Sbjct: 23 NPPWIPTPQLLCKYPILRHLSSCKTLKDLTQIHAQTITTGIFSDNFVASRILSFAALSPH 82
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETE-PDEYTYSFL 124
G + A +F + P I N +IR +A S P +V Y +M + PD +T+ L
Sbjct: 83 GSIPYARFLFYRIRKPDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLL 142
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMP 183
L C+ R GE +H V G+ S V + L+ +Y CG + A L+FD P
Sbjct: 143 LKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMY----ASCGLIESAGLVFDRTP 198
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
SWN ++ GY+K G A ++F+ MP R+VVSW+ MI+G Q + ++ L LF +
Sbjct: 199 ECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQD 258
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
M ++ ++ LV ALSACA +G ++ G+WI Y+E + V L ALI MY+
Sbjct: 259 MMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERK----NVRLTVRLGTALIDMYS 314
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLG 348
CG +E A VF KM+ +N ++W++MI G A G ++AL +TF+G
Sbjct: 315 KCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIG 374
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
+L+ACSH VDEG FF M +G+KP H+ CMVDL+ RAG++D+A +++++MP K
Sbjct: 375 ILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFK 434
Query: 409 PNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAA 468
PN A+ G+LL CRIH + EL QV ++L+ E+DP Y+ L++N+YAA RW VA
Sbjct: 435 PNSAIWGALLNACRIHGDTELGEQVGKRLL-ELDPNHGGRYV-LLSNIYAACGRWDRVAE 492
Query: 469 VRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
+R+ M + V K PG S++ + +H+FVAGDS++ Q +IY LGE++ + GYKPD
Sbjct: 493 LRRMMRERQVSKTPGCSFIDLGDTIHEFVAGDSSHPQLEMIYAKLGEMSQELKAAGYKPD 552
Query: 529 ISELFLGIEE 538
++ L ++E
Sbjct: 553 TGQVLLDMDE 562
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/511 (39%), Positives = 303/511 (59%), Gaps = 27/511 (5%)
Query: 36 LFQIHSQIIINGFSQKNYILAKLLAFYVTS---GYLINAHKVFEKTENPSTAIWNQMIRG 92
L QIH++++ G Q +Y + K L+ ++S +L A VF+ + P T +WN MIRG
Sbjct: 59 LKQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRG 118
Query: 93 HARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSN 152
+ S+ PE+S+ LY++M+ + YT+ LL C+ E Q+H ++ GY ++
Sbjct: 119 FSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLGYEND 178
Query: 153 VFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDE 212
V+ +L+N Y +G A LLFD +P VSWNS++KGY K G +D A +F +
Sbjct: 179 VYAVNSLINSYAATGN---FKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALTLFRK 235
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
M +N +SWTTMISG Q G ++AL LF+EM+ + V D V+L ALSACA++G L+ G
Sbjct: 236 MVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQG 295
Query: 273 KWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
KWIHSY+ + R + L LI MYA CG++ EA VF+ +QR++ +WT++I+G
Sbjct: 296 KWIHSYLTKT----RIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISG 351
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
+A G+ +EA+ +TF VL+ACS+ G V+EG+ F M +++ +KP
Sbjct: 352 YAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKP 411
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
IEHYGC+VDL SRAGL+DEA +Q MP+KPN + G+LL CRIH N EL ++ + L
Sbjct: 412 TIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEIL 471
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
+A IDP Y+ AN++A K+W A R+ M + GV K PG S + + G H+F+
Sbjct: 472 IA-IDPYHGGRYVH-KANIHAMGKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFL 529
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
AGD ++ + I + + + GY P+
Sbjct: 530 AGDRSHPEIEKIQSKWKIMRRKLEENGYVPE 560
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 144/312 (46%), Gaps = 38/312 (12%)
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFD 180
Y + + RC E +Q+H R+L +G + + T ++ + S + A+++FD
Sbjct: 43 YCMMPNTETRCSKQEELKQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFD 102
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM-----PHRNVVSWTTMISGCAQNGKSR 235
WN +++G+ + + + ++ M PH N ++ +++ C+
Sbjct: 103 GFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCCSAPH-NAYTFPSLLKACSNLSALE 161
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
+ + ++ + D A+ + +++ A G+ KL + F +P VS
Sbjct: 162 ETTQIHAQITKLGYENDVYAVNSLINSYAATGNFKLAHLL-------FDRIPKPDAVSW- 213
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF--------- 346
N++I YA G+++ A +FRKM +N +SWT+MI+G+ + G +EAL F
Sbjct: 214 NSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVE 273
Query: 347 ------LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH---YGC-MVDLFSRAGLMD 396
LSAC+ G +++G+ ++ K RI GC ++D++++ G M
Sbjct: 274 PDNVSLANALSACAQLGALEQGKWI-----HSYLTKTRIRMDSVLGCVLIDMYAKCGDMG 328
Query: 397 EAFSLVQNMPMK 408
EA + +N+ K
Sbjct: 329 EALEVFKNIQRK 340
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/506 (39%), Positives = 300/506 (59%), Gaps = 30/506 (5%)
Query: 15 SKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY---LINA 71
S + I S ++ + L Q H+ I+ +G + ++L+A T+ + + A
Sbjct: 2 SSSFPPPPILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYA 61
Query: 72 HKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARC 131
H +F + NP++ +WN +IR +A S TPE ++ ++ QM+ PD+YT++F L C
Sbjct: 62 HSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSF 121
Query: 132 GLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSW 190
EG Q+HG VL +G ++FI+ L++LY CG + AR L D M R VVSW
Sbjct: 122 SGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLY----ASCGCIEDARHLLDRMLERDVVSW 177
Query: 191 NSLLKGYVKRGDID-GAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARV 249
N+LL Y +RG ++ + ++F E P +NVVSW MI+G + G+ + L LF +M+ A V
Sbjct: 178 NALLSAYAERGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGV 237
Query: 250 GLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIE 309
D LV+ LSACA +G L G+W+H+Y+++N + + + + AL+ MY+ CG IE
Sbjct: 238 KPDNCTLVSVLSACAHVGALSQGEWVHAYIDKN-GISIDGFVAT---ALVDMYSKCGSIE 293
Query: 310 EAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACS 354
+A VF R++ +W S+I+G + G Q AL +TF+ VLSACS
Sbjct: 294 KALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACS 353
Query: 355 HGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL 414
G +DEGR+ F M GI+P IEHYGCMVDL R GL++EA LVQ MP K V
Sbjct: 354 RAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVW 413
Query: 415 GSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMI 474
SLL CR H N ELA +VAQKL+ E+ P++++ ++ L +N+YA+ RW+DV VRQKM
Sbjct: 414 ESLLGACRNHGNVELAERVAQKLL-ELSPQESSSFVQL-SNMYASMGRWKDVMEVRQKMR 471
Query: 475 KMGVRKPPGQSWVQINGVLHDFVAGD 500
GVRK PG S ++++G +++F+AG+
Sbjct: 472 AQGVRKDPGCSMIEVDGTVYEFLAGE 497
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/540 (37%), Positives = 322/540 (59%), Gaps = 29/540 (5%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV--TSGY-LIN-AHK 73
L ++FSL + T L IH+ +I + ++L+AF V +SG LI+ A +
Sbjct: 16 LKNPKLFSLETCSDLTH-LKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASR 74
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGL 133
+F + +NP+ I+N MIRGH+ S+ P+++ + Y Q + PD T+ FL+ C +
Sbjct: 75 IFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHC 134
Query: 134 FREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSL 193
G Q HG ++ G+ +V+++ +L+++Y G A L+F M VVSW S+
Sbjct: 135 ISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGD---TEAATLIFQRMYYVDVVSWTSM 191
Query: 194 LKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQ 253
++G+ K GD++ A K+FD+MP +N+V+W+TMISG AQN +A+ LF ++ V ++
Sbjct: 192 IRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANE 251
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
+V+ +S+CA +G L+LG+ H YV +N G L+ L AL+ MYA CG I++A
Sbjct: 252 TVMVSVISSCAHLGALELGERAHDYVVKN---GMTLNLI-LGTALVDMYARCGSIDKAVW 307
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGF 358
VF + R+T+SWT++I G A GY++ +L +TF VLSACSHGG
Sbjct: 308 VFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGL 367
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLL 418
V+ G Q FE M ++ ++PR+EHYGCMVDL RAG ++EA V MP+KPN V G+LL
Sbjct: 368 VERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALL 427
Query: 419 LGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
CRIH NAE+ +V K++ ++ P Q +GY L++N+YA AK W+ V +RQ M G+
Sbjct: 428 GACRIHKNAEIGERVG-KILIQLLP-QHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGL 485
Query: 479 RKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+KPPG S ++++G +H F GDS++ + I + EI M+ GY+ + ++ I+E
Sbjct: 486 KKPPGHSLIELDGRVHKFTIGDSSHPEMDKIERMWEEILMRIRAAGYRGNTADALFDIDE 545
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/564 (36%), Positives = 328/564 (58%), Gaps = 48/564 (8%)
Query: 8 PANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY 67
P P SK T+ + T + L Q+H+ I G Q A+++ F S
Sbjct: 16 PQPPLILSKPFTSCK---------TPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAFSSR 66
Query: 68 LIN-AHKVFEKTENPSTAIWNQMIRGHARSETPE---KSVYLYKQMI-DKETEPDEYTYS 122
I+ A VF + P+ WN ++R A + +++ L+ M+ D +P+ +T+
Sbjct: 67 DIDYARAVFRQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFP 126
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSG---GECGVGCARLL- 178
+L CAR REG+Q+HG ++ G+ + F+ +NL+ +Y+M + C ++
Sbjct: 127 SVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVD 186
Query: 179 FD-----DMPAR----SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCA 229
FD ++ R +VV WN ++ G V+ GDI A +FDEMP R+VVSW MISG A
Sbjct: 187 FDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYA 246
Query: 230 QNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREP 289
QNG +A++LF EM+ + + + V LV+ L A A IG L+LGKWIH Y +N +
Sbjct: 247 QNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKN----KIE 302
Query: 290 VLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF--- 346
+ L +AL+ MY+ CG I+EA VF + +RN ++W+++I FA G A++A++ F
Sbjct: 303 IDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLM 362
Query: 347 ------------LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGL 394
+G+LSACSH G V+EGR FF M + G++PRIEHYGCMVDL RAG
Sbjct: 363 GKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGH 422
Query: 395 MDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVA 454
++EA L++NMP++P+D + +LL C++H N ++ +VA+ L+ E+ P + Y+AL +
Sbjct: 423 LEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLM-ELAPHDSGSYVAL-S 480
Query: 455 NVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLG 514
N+YA+ W+ VA VR KM M +RK PG SW++I+G++H+F+ D ++ +A I LG
Sbjct: 481 NLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLG 540
Query: 515 EITMQAMQEGYKPDISELFLGIEE 538
E++M+ GY+P+ E+FL +E
Sbjct: 541 EMSMKLRSNGYRPNTLEVFLNTDE 564
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/525 (39%), Positives = 306/525 (58%), Gaps = 31/525 (5%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKTENPSTAIWNQMIR 91
K L QI +Q+I + + K L + G L+ A +VF +P+T +WN +IR
Sbjct: 2 KQLKQIQAQMIKTAIITEPKLATKFLTLCTSPHVGDLLYAQRVFNGITSPNTFMWNAIIR 61
Query: 92 GHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCS 151
++ S+ PE + Y+QM+ + YT+ FLL C E QVHG V+ G+ S
Sbjct: 62 AYSNSDEPELAFLSYQQMLSSSVPHNSYTFPFLLRACRNLLAMGEALQVHGLVIKLGFGS 121
Query: 152 NVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFD 211
+VF L+++Y + G + CAR LFD++P R VSWN ++ GY+K GD+ A+ +F
Sbjct: 122 DVFALNALLHVYALCGE---IHCARQLFDNIPERDAVSWNIMIDGYIKSGDVKTAYGVFL 178
Query: 212 EMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKL 271
+MP +NVVSWT++ISG + G+S +ALSL EM+ A LD VA+ + L+ACA +G L
Sbjct: 179 DMPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFELDGVAIASLLTACANLGALDQ 238
Query: 272 GKWIHSYVEEN-FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ--RRNTVSWTS 328
G+W+H YV N V R + AL++MY CG++EEA VF K++ +++ WT+
Sbjct: 239 GRWLHFYVLNNGVDVDR-----VIGCALVNMYVKCGDMEEALSVFGKLKGNQKDVYIWTA 293
Query: 329 MITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNW 373
MI GFA G EAL +TF VL ACS+GG V+EG++ F+ M +
Sbjct: 294 MIDGFAIHGRGVEALEWFNRMRREGIRPNSITFTAVLRACSYGGLVEEGKELFKSMKCFY 353
Query: 374 GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQV 433
+ P IEHYGCMVDL R+G +DEA L++ MPMKP+ + G+LL C IH + L SQV
Sbjct: 354 NVNPSIEHYGCMVDLLGRSGRLDEAKELIKKMPMKPSAVIWGALLKACWIHRDFLLGSQV 413
Query: 434 AQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVL 493
LV E+D + + Y+ L A + AA +W++ A VR KM +GV PG+S V +NG++
Sbjct: 414 GAHLV-EVDSDHSGRYIQL-ATILAAEGKWKEAAEVRLKMKSLGVPISPGKSSVTLNGIV 471
Query: 494 HDFVAGDSTYKQASLIYKTLGEITMQAMQ-EGYKPDISELFLGIE 537
H+F+AG + Q I L +I + Q EGY+P +L L +E
Sbjct: 472 HEFLAGHQDHPQMEQIQLKLKQIAERLRQDEGYEPATKDLLLDLE 516
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/564 (37%), Positives = 329/564 (58%), Gaps = 48/564 (8%)
Query: 8 PANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY 67
P P SK T+ + T + L Q+H+ I G Q A+++ F S
Sbjct: 16 PQPPLILSKPFTSCK---------TPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAFSSR 66
Query: 68 LIN-AHKVFEKTENPSTAIWNQMIRGHARSETPE---KSVYLYKQMI-DKETEPDEYTYS 122
I+ A VF + P+ WN ++R A + +++ L+ M+ D +P+ +T+
Sbjct: 67 DIDYARAVFRQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFP 126
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSG---GECGVGCARLL- 178
+L CAR REG+Q+HG ++ G+ + F+ +NL+ +Y+M + C ++
Sbjct: 127 SVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVD 186
Query: 179 FD-----DMPAR----SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCA 229
FD ++ R +VV WN ++ G V+ GDI A +FDEMP R+VVSW MISG A
Sbjct: 187 FDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYA 246
Query: 230 QNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREP 289
QNG +A++LF EM+ + + + V LV+ L A A IG L+LGKWIH Y +N V +
Sbjct: 247 QNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKN-KVEIDD 305
Query: 290 VLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF--- 346
VL S AL+ MY+ CG I++A VF + +RN ++W+++I FA G A++A++ F
Sbjct: 306 VLGS---ALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLM 362
Query: 347 ------------LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGL 394
+G+LSACSH G V+EGR FF M + G++PRIEHYGCMVDL RAG
Sbjct: 363 GKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGH 422
Query: 395 MDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVA 454
++EA L++NMP++P+D + +LL C++H N ++ +VA+ L+ E+ P + Y+AL +
Sbjct: 423 LEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLM-ELAPHDSGSYVAL-S 480
Query: 455 NVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLG 514
N+YA+ W+ VA VR KM M +RK PG SW++I+G++H+F+ D ++ +A I LG
Sbjct: 481 NLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLG 540
Query: 515 EITMQAMQEGYKPDISELFLGIEE 538
E++M+ GY+P+ E+FL +E
Sbjct: 541 EMSMKLRSNGYRPNTLEVFLNTDE 564
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/545 (36%), Positives = 317/545 (58%), Gaps = 30/545 (5%)
Query: 6 IIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS 65
IP + L ++ S+L + Q+H+ II NG SQ +Y+L KL+
Sbjct: 28 FIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKV 87
Query: 66 GYLINAHK--VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSF 123
+ ++ VF + P+ +W MIRG+A +S Y +M P +T+S
Sbjct: 88 DVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSA 147
Query: 124 LLSVCARCGLFREGEQVHGR-VLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDD 181
L C G+QVH + +L G+ S++++ ++++LY+ +CG +GCAR +FD+
Sbjct: 148 LFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYV----KCGFLGCARKVFDE 203
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
M R VVSW L+ Y K GD++ A +FD++P +++V+WT M++G AQNG+ ++AL F
Sbjct: 204 MSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYF 263
Query: 242 NEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPV-LVSLNNALIH 300
+M+ + D+V L +SACA++G +K WI E + G P V + +ALI
Sbjct: 264 QKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERS---GFGPSGNVVVGSALID 320
Query: 301 MYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LT 345
MY+ CG +EAY VF M+ RN S++SMI G+A G A AL +T
Sbjct: 321 MYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVT 380
Query: 346 FLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
F+G+LSACSH G V++GRQ F M + +G+ P +HY CMVDL RAG ++EA LV+ M
Sbjct: 381 FIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTM 440
Query: 406 PMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQD 465
PM+PN V G+LL CRIH N ++A Q+A + +++P Y+ L++N+YA+A RW++
Sbjct: 441 PMEPNGGVWGALLGACRIHGNPDIA-QIAANELFKLEPNGIGNYI-LLSNIYASAGRWEE 498
Query: 466 VAAVRQKMIKMGVRKPPGQSWVQ-INGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEG 524
V+ +R+ + + G +K PG SW + NG +HDF AGD+T+ ++S I + L ++ + G
Sbjct: 499 VSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHG 558
Query: 525 YKPDI 529
YKP++
Sbjct: 559 YKPNL 563
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/549 (36%), Positives = 322/549 (58%), Gaps = 30/549 (5%)
Query: 12 ATSSKALTTRQIF-SLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLIN 70
TSS +L + F LL+ R + + QIH+Q++ +G +Q +L L+ Y+ L
Sbjct: 46 GTSSFSLPSHSTFVQLLKKRPSLTQIKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSF 105
Query: 71 AHKVFEKTEN-PSTAIWNQMIRGHARSETPEKSVYLYKQMI--DKETEPDEYTYSFLLSV 127
A VF++ + P T IWN MI+ ++++ + ++S+YL+ QM+ + T D+YT++F+ +
Sbjct: 106 ARIVFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTA 165
Query: 128 CARCGLFR-EGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARS 186
C+R R GE VHG V+ GY S++F+ +L+N+Y + A+ +FD+MP R
Sbjct: 166 CSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVD---AKRVFDEMPQRD 222
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR- 245
V++W S++KGY RG++ A ++FD MP RN VSW M++G + +AL FN+M
Sbjct: 223 VITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLC 282
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC 305
V ++ LV+ LSACA +G L GKWIH Y+++N R + +++ ALI MYA C
Sbjct: 283 HDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKN----RILLSSNISTALIDMYAKC 338
Query: 306 GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF---------------LGVL 350
G I+ A VF + +R+ ++WTSMI+G + G E L TF LGVL
Sbjct: 339 GRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVL 398
Query: 351 SACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPN 410
+ CSH G V+EG F M WGI P++EHYGC++DL RAG ++ AF +++MPM+P+
Sbjct: 399 NGCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPD 458
Query: 411 DAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVR 470
+LL CRIH + +L ++ +AE+ P G L++N+YA+ +W+ V VR
Sbjct: 459 VVAWRALLSACRIHGDVDLGERIINH-IAELCPGSHGGGYVLLSNLYASMGQWESVTKVR 517
Query: 471 QKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ-AMQEGYKPDI 529
+ M + G PG SW++I+GV+H+F+A D + + S I K L E+ + +++ GY P
Sbjct: 518 KAMSQRGSEGCPGCSWIEIDGVVHEFLAADKLHPRISEINKKLNEVLRRISIEGGYVPST 577
Query: 530 SELFLGIEE 538
++ + E
Sbjct: 578 KQVLFDLNE 586
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/545 (36%), Positives = 317/545 (58%), Gaps = 30/545 (5%)
Query: 6 IIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS 65
IP + L ++ S+L + Q+H+ II NG SQ +Y+L KL+
Sbjct: 28 FIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKV 87
Query: 66 GYLINAHK--VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSF 123
+ ++ VF + P+ +W MIRG+A +S Y +M P +T+S
Sbjct: 88 DVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSA 147
Query: 124 LLSVCARCGLFREGEQVHGR-VLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDD 181
L C G+QVH + +L G+ S++++ ++++LY+ +CG +GCAR +FD+
Sbjct: 148 LFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYV----KCGFLGCARKVFDE 203
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
M R VVSW L+ Y K GD++ A +FD++P +++V+WT M++G AQNG+ ++AL F
Sbjct: 204 MSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYF 263
Query: 242 NEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPV-LVSLNNALIH 300
+M+ + D+V L +SACA++G +K WI E + G P V + +ALI
Sbjct: 264 QKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERS---GFGPSGNVVVGSALID 320
Query: 301 MYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LT 345
MY+ CG +EAY VF M+ RN S++SMI G+A G A AL +T
Sbjct: 321 MYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVT 380
Query: 346 FLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
F+G+LSACSH G V++GRQ F M + +G+ P +HY CMVDL RAG ++EA LV+ M
Sbjct: 381 FIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTM 440
Query: 406 PMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQD 465
PM+PN V G+LL CRIH N ++A Q+A + +++P Y+ L++N+YA+A RW++
Sbjct: 441 PMEPNGGVWGALLGACRIHGNPDIA-QIAANELFKLEPNGIGNYI-LLSNIYASAGRWEE 498
Query: 466 VAAVRQKMIKMGVRKPPGQSWVQ-INGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEG 524
V+ +R+ + + G +K PG SW + NG +HDF AGD+T+ ++S I + L ++ + G
Sbjct: 499 VSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHG 558
Query: 525 YKPDI 529
YKP++
Sbjct: 559 YKPNL 563
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/551 (37%), Positives = 314/551 (56%), Gaps = 26/551 (4%)
Query: 5 EIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV- 63
+++ A+P + S A + L +T L Q HSQII G S N + +++ F
Sbjct: 5 QLLQASPPSLSSAKAHKLPLYGLDSCSTMAELKQYHSQIIRLGLSADNDAMGRVIKFCAI 64
Query: 64 -TSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYS 122
SG L A +VF+K +P I+N + RG+ R + +++Y +M+ K P+++TY
Sbjct: 65 SKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYP 124
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDM 182
L+ C EG+Q+H VL G+ ++ F NL+++Y+ + AR +FD+M
Sbjct: 125 PLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQS---LEQARRVFDNM 181
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
P R VVSW SL+ GY + G +D A ++F+ MP RN VSW MI+ Q+ + +A +LF+
Sbjct: 182 PQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFD 241
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMY 302
MR V LD+ + LSAC +G L+ GKWIH Y+E++ G E + L +I MY
Sbjct: 242 RMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKS---GIE-LDSKLATTVIDMY 297
Query: 303 ASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFL 347
CG +E+A VF ++ ++ SW MI G A G + A+ +TF+
Sbjct: 298 CKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFV 357
Query: 348 GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM 407
VLSAC+H G V+EG+ +F+ M + G+KP +EH+GCMVDL RAGL++EA L+ MP+
Sbjct: 358 NVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPV 417
Query: 408 KPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVA 467
P+ VLG+L+ CRIH N EL Q+ +K++ E++P + Y+ L+AN+YA+A RW+DVA
Sbjct: 418 NPDAGVLGALVGACRIHGNTELGEQIGKKVI-ELEPHNSGRYV-LLANLYASAGRWEDVA 475
Query: 468 AVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
VR+ M GV+K PG S ++ + +F+AG + QA IY L EI GY P
Sbjct: 476 KVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVP 535
Query: 528 DISELFLGIEE 538
D + I+E
Sbjct: 536 DTDGVLHDIDE 546
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/517 (36%), Positives = 306/517 (59%), Gaps = 26/517 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H ++ +G ++ L+ Y+ G L A VF+ WN +I + +
Sbjct: 139 QLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVG 198
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E+S L+ M DK+ P T +LS C++ R G++VH V SN+ +
Sbjct: 199 KFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLEN 258
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
++++Y +CG + A +F M R ++SW +++ G+ G+ID A FD+MP +
Sbjct: 259 AMIDMY----ADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEK 314
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
+ VSWT MI G ++ + ++AL LF M+ V D+ +V+ L+ACA +G L+LG+WI
Sbjct: 315 DYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIR 374
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+Y++ N + + + + NALI MY CG++++A +FR+M +R+ +WT+MI G A
Sbjct: 375 TYIDRN-KIKND---LFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVN 430
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G+ ++AL +T++GVLSAC+H G VD+GR++F M GI+P I H
Sbjct: 431 GHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAH 490
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YGC+VDL +RAG + EA+ +++NMP+K N V G+LL GCR++ +++A V ++++ E+
Sbjct: 491 YGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQIL-EL 549
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+P+ A Y+ L+ N+YAA KRW D+ +RQ M+ G++K PG S +++NG +H+FVAGD
Sbjct: 550 EPDNGAVYV-LLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDR 608
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++ Q I L ++T GY PDISE+FL I E
Sbjct: 609 SHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAE 645
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 201/421 (47%), Gaps = 68/421 (16%)
Query: 6 IIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS 65
I + A S + T + SLL+ + L Q+H Q I G + + +++ F T
Sbjct: 4 IAATSSALKSFSPPTHPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTH 63
Query: 66 GY--LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSF 123
Y A ++F++ P+ IWN MIRG++R + P+ V LY +M+ + +PD YT+ F
Sbjct: 64 EYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPF 123
Query: 124 LLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMP 183
L R G Q+HG VL G NVF+ T L+ +YL+ G + AR +FD P
Sbjct: 124 LFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCG---QLDTARGVFDVCP 180
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
V++WN ++ Y K G + + ++F M + V+ T
Sbjct: 181 KADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTT--------------------- 219
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
V LV LSAC+++ DL+ GK +HSYV +N V E LV L NA+I MYA
Sbjct: 220 ----------VTLVLVLSACSKLKDLRTGKKVHSYV-KNCKV--ESNLV-LENAMIDMYA 265
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGR 363
CGE++ A G+FR M R+ +SWT++++GF G +D R
Sbjct: 266 DCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGE--------------------IDVAR 305
Query: 364 QFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP---MKPNDAVLGSLLLG 420
+F+ M + + + M+D + R+ EA L +NM +KP++ + S+L
Sbjct: 306 NYFDKMPEKDYVS-----WTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTA 360
Query: 421 C 421
C
Sbjct: 361 C 361
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/516 (37%), Positives = 300/516 (58%), Gaps = 24/516 (4%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H I+ GFS ++ L+ Y SG + A VF+++ WN MI G+ RS+
Sbjct: 140 ELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSK 199
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++S+ L+ +M P T +LS C++ G++VH V +
Sbjct: 200 QFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLEN 259
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y G + A +FD+M +R V+SW +++ G+ G + A FD+MP R+
Sbjct: 260 ALIDMYAACGD---MDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERD 316
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VSWT MI G Q + ++ LSLF EM+ A + D+ +V+ L+ACA +G L+LG+WI +
Sbjct: 317 FVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKA 376
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y+++N + + NALI MY +CG +E+A +F M R+ +SWT++I G A G
Sbjct: 377 YIDKN----EIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAING 432
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
Y +EAL +T +GVL AC+H G VD+G++FF M GI+P + HY
Sbjct: 433 YGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHY 492
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
GCMVDL RAG + EA +++NMP+KPN V GSLL CR+H + E+A AQ+++ E++
Sbjct: 493 GCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQIL-ELE 551
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
PE A Y+ L+ N+YAA RW+ + VR+ M+ G++K PG S +++NG +H+FVAGD
Sbjct: 552 PENGAVYV-LLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQV 610
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ Q+ IY L E+++ GY PD SE+FL I E
Sbjct: 611 HPQSKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGE 646
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 233/500 (46%), Gaps = 93/500 (18%)
Query: 11 PATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYL 68
P T +L SL++ + L QIHSQ I G + A+++AF G +
Sbjct: 10 PPTHLPSLPQTPPLSLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDM 69
Query: 69 INAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVC 128
A VF+ P+ +WN MI+G++R P +V +Y +M+++ PDEYTY FLL
Sbjct: 70 EYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRF 129
Query: 129 ARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVV 188
R + G ++H ++ G+ SNVF++ L++LY +SG V AR +FD VV
Sbjct: 130 TRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSG---EVSVARGVFDRSSKGDVV 186
Query: 189 SWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR 248
+WN ++ GY + D + K+FD EM R R
Sbjct: 187 TWNVMISGYNRSKQFDESMKLFD-------------------------------EMERMR 215
Query: 249 VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEI 308
V + LV+ LSAC+++ DL +GK +H YV++ + EPV V L NALI MYA+CG++
Sbjct: 216 VLPSSITLVSVLSACSKLKDLNVGKRVHRYVKD---LKIEPVRV-LENALIDMYAACGDM 271
Query: 309 EEAYGVFRKMQRRNTVSWTSMITGFAK--------------------------QGYAQ-- 340
+ A G+F M+ R+ +SWT+++TGF GY Q
Sbjct: 272 DTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVN 331
Query: 341 ---EAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
E L T + +L+AC+H G ++ G +++N + +I+ +
Sbjct: 332 RFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKN---EIKIDSF 388
Query: 383 --GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELA-SQVAQKLVA 439
++D++ G +++A + MP + + +++ G I+ E A +Q L A
Sbjct: 389 VGNALIDMYFNCGNVEKAIRIFNAMPHR-DKISWTAVIFGLAINGYGEEALDMFSQMLKA 447
Query: 440 EIDPEQAAGYLALVANVYAA 459
I P++ L A ++
Sbjct: 448 SITPDEVTCIGVLCACTHSG 467
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/517 (36%), Positives = 306/517 (59%), Gaps = 26/517 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H ++ +G ++ L+ Y+ G L A VF+ WN +I + +
Sbjct: 160 QLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVG 219
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E+S L+ M DK+ P T +LS C++ R G++VH V SN+ +
Sbjct: 220 KFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLEN 279
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
++++Y +CG + A +F M R ++SW +++ G+ G+ID A FD+MP +
Sbjct: 280 AMIDMY----ADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEK 335
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
+ VSWT MI G ++ + ++AL LF M+ V D+ +V+ L+ACA +G L+LG+WI
Sbjct: 336 DYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIR 395
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+Y++ N + + + + NALI MY CG++++A +FR+M +R+ +WT+MI G A
Sbjct: 396 TYIDRN-KIKND---LFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVN 451
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G+ ++AL +T++GVLSAC+H G VD+GR++F M GI+P I H
Sbjct: 452 GHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAH 511
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YGC+VDL +RAG + EA+ +++NMP+K N V G+LL GCR++ +++A V ++++ E+
Sbjct: 512 YGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQIL-EL 570
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+P+ A Y+ L+ N+YAA KRW D+ +RQ M+ G++K PG S +++NG +H+FVAGD
Sbjct: 571 EPDNGAVYV-LLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDR 629
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++ Q I L ++T GY PDISE+FL I E
Sbjct: 630 SHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAE 666
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 201/421 (47%), Gaps = 68/421 (16%)
Query: 6 IIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS 65
I + A S + T + SLL+ + L Q+H Q I G + + +++ F T
Sbjct: 25 IAATSSALKSFSPPTHPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTH 84
Query: 66 GY--LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSF 123
Y A ++F++ P+ IWN MIRG++R + P+ V LY +M+ + +PD YT+ F
Sbjct: 85 EYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPF 144
Query: 124 LLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMP 183
L R G Q+HG VL G NVF+ T L+ +YL+ G + AR +FD P
Sbjct: 145 LFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCG---QLDTARGVFDVCP 201
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
V++WN ++ Y K G + + ++F M + V+ T
Sbjct: 202 KADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTT--------------------- 240
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
V LV LSAC+++ DL+ GK +HSYV +N V E LV L NA+I MYA
Sbjct: 241 ----------VTLVLVLSACSKLKDLRTGKKVHSYV-KNCKV--ESNLV-LENAMIDMYA 286
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGR 363
CGE++ A G+FR M R+ +SWT++++GF G +D R
Sbjct: 287 DCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGE--------------------IDVAR 326
Query: 364 QFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP---MKPNDAVLGSLLLG 420
+F+ M + + + M+D + R+ EA L +NM +KP++ + S+L
Sbjct: 327 NYFDKMPEKDYVS-----WTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTA 381
Query: 421 C 421
C
Sbjct: 382 C 382
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/548 (37%), Positives = 321/548 (58%), Gaps = 32/548 (5%)
Query: 10 NPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIIN---GFSQKNYILAKLLAFYVTSG 66
NP T+ + QI SL T + L Q+H+QII + F L+ + T
Sbjct: 59 NPLTNPP--SNPQILSLFNPCKTLRHLKQVHAQIITHHNSPFQLSALASLSALSPFPT-- 114
Query: 67 YLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLS 126
+L A +F +NP +++N +IR + S+TP +++ LY M+ +PD TY F++
Sbjct: 115 FLAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIK 174
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARS 186
C + G VH V+ SG+ + +I ++L++LY + G+ +G A+ LF+ AR
Sbjct: 175 ACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLY--ANGK-DLGAAKQLFNLCSARD 231
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
VVSWN+++ GYVK ++ A +FD M R+V+SW TMI+G A GK +AL+LF++MR
Sbjct: 232 VVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRA 291
Query: 247 ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCG 306
V + +V+ LSACA +G L G +H+Y+ +N R V + AL+ MYA CG
Sbjct: 292 VGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDN----RIEVNSIVGTALVDMYAKCG 347
Query: 307 EIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLS 351
+I A VF M+ ++ ++W ++I G A G +EA +TF+ +LS
Sbjct: 348 KISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILS 407
Query: 352 ACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPND 411
ACSH G VDEG++ +CM+ ++GI+P++EHYGC++DL +RAG ++EA L+ MPM+PN
Sbjct: 408 ACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNP 467
Query: 412 AVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQ 471
+ LG+LL GCRIH N EL V ++L+ + P + Y+ L++N+YAAAK+W D VR
Sbjct: 468 SALGALLGGCRIHGNFELGEMVGKRLI-NLQPCHSGRYI-LLSNIYAAAKKWDDARKVRN 525
Query: 472 KMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQE-GYKPDIS 530
M G+ K PG S +++ G++H FVAGD ++ +++ IY+ L EI + GY D
Sbjct: 526 LMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTG 585
Query: 531 ELFLGIEE 538
+ L +EE
Sbjct: 586 NVLLDMEE 593
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/536 (37%), Positives = 301/536 (56%), Gaps = 60/536 (11%)
Query: 15 SKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY---LINA 71
S + I S ++ + L Q H+ I+ +G + ++L+A T+ + + A
Sbjct: 2 SSSFPPPPILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYA 61
Query: 72 HKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARC 131
H +F + NP++ +WN +IR +A S TPE ++ ++ QM+ PD+YT++F L C
Sbjct: 62 HSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSF 121
Query: 132 GLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSW 190
EG Q+HG VL +G ++FI+ L++LY CG + AR L D M R VVSW
Sbjct: 122 SGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLY----ASCGCIEDARHLLDRMLERDVVSW 177
Query: 191 NSLLKGYVKRGDIDGAWKIFDEM-------------------------------PHRNVV 219
N+LL Y +RG ++ A +FDEM P +NVV
Sbjct: 178 NALLSAYAERGLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGETPVKNVV 237
Query: 220 SWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV 279
SW MI+G + G+ + L LF +M+ A V D LV+ LSACA +G L G+W+H+Y+
Sbjct: 238 SWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYI 297
Query: 280 EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYA 339
++N + + + + AL+ MY+ CG IE+A VF R++ +W S+I+G + G
Sbjct: 298 DKN-GISIDGFVAT---ALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSG 353
Query: 340 QEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGC 384
Q AL +TF+ VLSACS G +DEGR+ F M GI+P IEHYGC
Sbjct: 354 QHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGC 413
Query: 385 MVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPE 444
MVDL R GL++EA LVQ MP K V SLL CR H N ELA +VAQKL+ E+ P+
Sbjct: 414 MVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLL-ELSPQ 472
Query: 445 QAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
+++ ++ L +N+YA+ RW+DV VRQKM GVRK PG S ++++G +++F+AG+
Sbjct: 473 ESSSFVQL-SNMYASMGRWKDVMEVRQKMRAQGVRKDPGCSMIEVDGTVYEFLAGE 527
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/556 (36%), Positives = 324/556 (58%), Gaps = 31/556 (5%)
Query: 4 EEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV 63
+ IP + K L +R + S+L + Q+H+ I G Q ++LAKLL
Sbjct: 24 QSFIPFSVRQEQKILESR-LVSVLHGCTHINQVKQVHAHIFRKGLEQCCFVLAKLLRTLT 82
Query: 64 TSGYLINAHK--VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
++ + VF++ E P+ +W +IRG+A +SV LY M + P +T+
Sbjct: 83 KLDVPMDPYPRLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTF 142
Query: 122 SFLLSVCARCGLFREGEQVHGR-VLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLF 179
+ LL C+ G QVH + +L G+ S++++ L+++Y+ +CG +GC +F
Sbjct: 143 TALLKACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYV----KCGCLGCGHRVF 198
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
D+M R V+SW SL+ Y K G+++ A ++FD +P +++V+WT M++G AQN + R+AL
Sbjct: 199 DEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALE 258
Query: 240 LFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL-VSLNNAL 298
+F M+ A V D+V LV +SACA++G K W+ E++ G P V + +AL
Sbjct: 259 VFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQS---GFGPTSNVVVGSAL 315
Query: 299 IHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------------- 343
I MYA CG +E+AY VF +M+ RN S++SMI GFA G A A+
Sbjct: 316 IDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNR 375
Query: 344 LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQ 403
+TF+GVL+ACSH G V++G+Q F M + G+ P +HY CMVDL RAG ++EA +LV+
Sbjct: 376 VTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVK 435
Query: 404 NMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRW 463
MPM P+ V G+LL CRIH N ++A Q+A + E++P Y+ L++N+YA+A RW
Sbjct: 436 MMPMNPHGGVWGALLGACRIHGNPDMA-QIAASHLFELEPNGIGNYI-LLSNIYASAGRW 493
Query: 464 QDVAAVRQKMIKMGVRKPPGQSWVQ-INGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQ 522
DV+ VR+ M G++K PG SWV+ G++H+F AGD ++ ++ I + L ++ +
Sbjct: 494 DDVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHEFFAGDMSHPKSREIKQALEDLLDRLKY 553
Query: 523 EGYKPDISELFLGIEE 538
GY+P++S + I +
Sbjct: 554 LGYQPNLSSVAYDISD 569
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/567 (35%), Positives = 317/567 (55%), Gaps = 57/567 (10%)
Query: 21 RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLL--AFYVTSGY-LINAHKVFEK 77
+++ SLLQ + QIH+ II N++LAKLL F +S L+ A VF++
Sbjct: 4 KKVMSLLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDE 63
Query: 78 TENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEP-DEYTYSFLLSVCARCGLFRE 136
+P T IWN MIR + S+ P++S+ L+ QM +E P D Y+ S ++ C R
Sbjct: 64 IPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGN 123
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSG----------------------------- 167
G+++H +VL G S++F+ T L+ +Y G
Sbjct: 124 GQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVR 183
Query: 168 -GECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMIS 226
GE + A LFD MP R +VSWN+++ G+ GD+ A K+FD R+++SW++MI+
Sbjct: 184 VGE--INLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIA 241
Query: 227 GCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVG 286
A+ +S +AL LF+EM+ A V D+V +V+ LSAC ++G L +GK IH +E N
Sbjct: 242 AYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERN---- 297
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--- 343
R + + L +L+ MYA CG+I+ + VF M R+ +W++MI G A G+ + AL
Sbjct: 298 RIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHF 357
Query: 344 ------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSR 391
+TF+GVLSACSH G VDEG +F M++ + + P+IEHYGC+VD+ R
Sbjct: 358 SKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGR 417
Query: 392 AGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLA 451
AG + EA L+++MP P+ V +LL CRI+ N E+A + L+ E++P Y+
Sbjct: 418 AGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLL-ELEPHVDGNYV- 475
Query: 452 LVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYK 511
L++N+Y+ AK W V VR+ M + ++K PG S ++++ +H+FVAGD ++ ++ I +
Sbjct: 476 LLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILR 535
Query: 512 TLGEITMQAMQEGYKPDISELFLGIEE 538
L EIT + GY P + + +E
Sbjct: 536 MLSEITARLKANGYAPLTASVLQDFDE 562
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/439 (43%), Positives = 277/439 (63%), Gaps = 26/439 (5%)
Query: 116 PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGC 174
PD +T SF+L C + G+ +HG G+ SN+F++ ++NLY G CG +G
Sbjct: 8 PDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLY----GLCGEMGD 63
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
A LLF+ MP R V+WN ++ KRGDIDGA+ F MP++NV SWT+MISG Q GK
Sbjct: 64 AMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKP 123
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
+A+ LF ++ V ++V +V+ L+ACA++GDL LG+ +H Y ++ R V +
Sbjct: 124 NEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKS-GFKRN---VHV 179
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------- 343
N LI MY CG +E A VF +M+ R VSW++MI G A G A+EAL
Sbjct: 180 CNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGV 239
Query: 344 ----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAF 399
+TF+G+L ACSH G +DEGR+FF M ++G+ P+IEHYGC+VDLFSRAGL++EA
Sbjct: 240 KPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAH 299
Query: 400 SLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAA 459
+ +MP+KPN V G+LL GC++H N +LA + A K ++E+DP GY +++N+YA
Sbjct: 300 EFILSMPIKPNGVVWGALLGGCKVHKNIDLAEE-AIKHLSELDPLN-DGYYVVISNIYAE 357
Query: 460 AKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
A+RW+D A VR+ M GV+K G S + +NGV+H+FVAGD T+ QA I K ++ ++
Sbjct: 358 AERWEDAARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVK 417
Query: 520 AMQEGYKPDISELFLGIEE 538
+ GY P S + L +EE
Sbjct: 418 MKRRGYAPKTSVVLLDMEE 436
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 130/283 (45%), Gaps = 44/283 (15%)
Query: 52 NYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMID 111
N ++A+L G + A+ F + N + W MI G + P +++ L+ ++ D
Sbjct: 80 NIVIAQL----AKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAIDLFMKLED 135
Query: 112 KETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG 171
+ P+E T +L+ CA G G VH SG+ NV + L+++Y+ +CG
Sbjct: 136 EAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYV----KCG 191
Query: 172 -VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQ 230
+ AR +F +M R+VVSW++++ +G A
Sbjct: 192 CLENARRVFYEMEERTVVSWSAMI-------------------------------AGLAM 220
Query: 231 NGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPV 290
+G++ +AL LF+EM + V + V + L AC+ +G + G+ + + ++ V +
Sbjct: 221 HGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQ-- 278
Query: 291 LVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITG 332
+ ++ +++ G +EEA+ M + N V W +++ G
Sbjct: 279 -IEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLGG 320
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H +GF + ++ L+ YV G L NA +VF + E + W+ MI G A
Sbjct: 164 VHEYSTKSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQ 223
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLAS 147
E+++ L+ +MI +P+ T+ LL C+ GL EG + + A
Sbjct: 224 AEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTAD 272
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 193/530 (36%), Positives = 304/530 (57%), Gaps = 24/530 (4%)
Query: 24 FSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPST 83
S L+ T L IH+ +I + + L++ + L A +VF + +NP+
Sbjct: 19 LSFLESCTTLSHLKIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNL 78
Query: 84 AIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGR 143
I+N IRG + S+ P+KS + Y Q PD TY FL+ C + G G Q HG+
Sbjct: 79 FIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQ 138
Query: 144 VLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDI 203
++ G+ S+V+++ +L+ +Y G + A +F + VVSW S++ GY+K GD+
Sbjct: 139 IIRHGFDSDVYVQNSLVTMYSTLGD---IKSASYVFRRISCLDVVSWTSMVAGYIKSGDV 195
Query: 204 DGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSAC 263
A K+FD+MP +N+V+W+ MISG A+N +A+ L+ ++ V ++ +V+ +++C
Sbjct: 196 TSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASC 255
Query: 264 AEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNT 323
A +G L+LG+ H Y+ N + V + L AL+ MYA CG I++A VF ++ R+
Sbjct: 256 AHLGALELGERAHDYILRN----KMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDA 311
Query: 324 VSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFEC 368
+SWT++I GFA GYA++AL +TF VLSACSHGG V+ G + FE
Sbjct: 312 LSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFES 371
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAE 428
M +++ I+PR+EHYGCMVDL RAG + EA V MPMKPN + G+LL CRIH N+E
Sbjct: 372 MKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSE 431
Query: 429 LASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
+A + + L+ E+ PE +GY L++N+YA +W++V +RQ M + GV KPPG + +
Sbjct: 432 IAERAGKTLI-ELKPEH-SGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFE 489
Query: 489 INGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++G +H F GD T+ + I + EI + GY + + I+E
Sbjct: 490 MDGKVHKFTIGDKTHPEIQQIERMWEEILGKIRLAGYTGNNDDALFDIDE 539
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 197/524 (37%), Positives = 310/524 (59%), Gaps = 33/524 (6%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHK----VFEKTENPSTAIWNQMIRGH 93
++H+QI I Q +Y+L KLL VT+ + H +F + P+ W +IR +
Sbjct: 26 EVHAQIYIKNLQQSSYVLTKLLRL-VTALPHVPLHSYPRLLFSQLHTPNPFAWTALIRAY 84
Query: 94 ARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGR-VLASGYCSN 152
A +++ Y M + P +T+S L S CA G Q+H + +L G+ S+
Sbjct: 85 ALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSALGAQLHAQTLLLGGFSSD 144
Query: 153 VFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFD 211
+++ ++++Y+ +CG + CAR++FD+MP R V+SW L+ Y + GD+ A +FD
Sbjct: 145 LYVNNAVIDMYV----KCGSLRCARMVFDEMPERDVISWTGLIVAYTRIGDMRAARDLFD 200
Query: 212 EMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKL 271
+P +++V+WT M++G AQN AL +F +R V +D+V LV +SACA++G K
Sbjct: 201 GLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVISACAQLGASKY 260
Query: 272 GKWIHSYVEEN-FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMI 330
WI E + F VG + VLV +ALI MY+ CG +EEAY VF+ M+ RN S++SMI
Sbjct: 261 ANWIRDIAESSGFGVG-DNVLV--GSALIDMYSKCGNVEEAYDVFKGMRERNVFSYSSMI 317
Query: 331 TGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGI 375
GFA G A+ A+ +TF+GVL+ACSH G VD+G+Q F M + +G+
Sbjct: 318 VGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGLVDQGQQLFASMEKCYGV 377
Query: 376 KPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQ 435
P E Y CM DL SRAG +++A LV+ MPM+ + AV G+LL +H N ++A ++A
Sbjct: 378 APTAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGALLGASHVHGNPDVA-EIAS 436
Query: 436 KLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQI-NGVLH 494
K + E++P+ YL L++N YA+A RW DV+ VR+ + + ++K PG SWV+ NG++H
Sbjct: 437 KRLFELEPDNIGNYL-LLSNTYASAGRWDDVSKVRKLLREKNLKKNPGWSWVEAKNGMIH 495
Query: 495 DFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
FVAGD ++ + + I K L ++ + GY+P++S L GI +
Sbjct: 496 KFVAGDVSHPKINEIKKELNDLLERLKGIGYQPNLSSLPYGIND 539
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 204/548 (37%), Positives = 312/548 (56%), Gaps = 65/548 (11%)
Query: 24 FSLLQIRNTTKTLFQIHSQIIINGFS-QKNYILAKLLAFYVTSGYLIN---AHKVFEKTE 79
S LQ + K L QIH+ II S ++ L+ I+ A + +
Sbjct: 41 LSTLQTCKSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLR 100
Query: 80 NPSTAIWNQMIRGHARSETPE-KSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE 138
P+ ++N +IRG A S + + +YKQM+ K PD YT F+L CA REGE
Sbjct: 101 TPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGE 160
Query: 139 QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV-GCARLLFDDMPARSVVSWNSLLKGY 197
+VHG+ + G S+V++ LM +Y + C V AR +FD P R +VSW ++++GY
Sbjct: 161 EVHGQAIKMGLASDVYVSNTLMRMYAV----CDVIRSARKVFDTSPQRDLVSWTTMIQGY 216
Query: 198 VKRG----------------------------------DIDGAWKIFDEMPHRNVVSWTT 223
VK G D + A K+F EMP +NVVSW +
Sbjct: 217 VKMGFAREGVGLYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNS 276
Query: 224 MISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENF 283
MISG AQ G+ +++L +F +M+R V D V LVA L++CA +G L+LGKW+H+Y++ N
Sbjct: 277 MISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRN- 335
Query: 284 SVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL 343
+ + + NAL+ MYA CG I++A VF+ M R++ S+T+MI G A G +AL
Sbjct: 336 QIRADGFI---GNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKAL 392
Query: 344 ---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDL 388
+TF+GVL+ACSH G V+EGR++FE M+ + ++P++EHYGCMVDL
Sbjct: 393 DLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDL 452
Query: 389 FSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAG 448
RAGL++EA ++NMP++P+ VLG+LL C+IH EL V +K + +I+P +
Sbjct: 453 LGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKK-IEKIEPRKDGA 511
Query: 449 YLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASL 508
Y+ L++N+Y++A RW+D +R+ M + + K PG S ++++GV+H+F GD ++ +
Sbjct: 512 YV-LMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKE 570
Query: 509 IYKTLGEI 516
IYK L EI
Sbjct: 571 IYKLLDEI 578
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 204/541 (37%), Positives = 320/541 (59%), Gaps = 44/541 (8%)
Query: 32 TTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY--LINAHKVFEKTENPSTAIWNQM 89
T + L Q+H+Q+I + A+LL F S + L A K+F P+ +N +
Sbjct: 23 TMQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTL 82
Query: 90 IRGHARSETPEKSVYLYKQMI-DKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASG 148
IR + S P ++ ++ +M+ D EP+ +T+ + C R REG QVHG + G
Sbjct: 83 IRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFG 142
Query: 149 YCSNVFIRTNLMNLYLMSGGECGV--GCARLLFD-----------DMPAR---SVVSWNS 192
S+ F+ +N++ +YL CGV RL + D R VV WN
Sbjct: 143 LDSDEFVVSNVVRMYL----SCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNV 198
Query: 193 LLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLD 252
++ GYV+ G+++ A +FDEMP R+VVSW MI+G AQ+G ++A+ +F EM+ A V +
Sbjct: 199 MIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPN 258
Query: 253 QVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAY 312
V LV+ L A + +G L+LGKW+H Y N ++G + VL S ALI MYA CG IE+A
Sbjct: 259 YVTLVSVLPAMSRLGALELGKWVHLYAVRN-NIGVDDVLGS---ALIDMYAKCGSIEKAL 314
Query: 313 GVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGG 357
VF + +RN V+W+++I G A G A++ L +T++G+LSACSH G
Sbjct: 315 QVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAG 374
Query: 358 FVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSL 417
V+EGR FF+ M + G++PRIEHYGCMVDL RAGL++E+ L+ NMP+KP+D + +L
Sbjct: 375 LVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKAL 434
Query: 418 LLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMG 477
L C++H N E+ +VA+ L+ E+ P + Y+AL +N+YA+ W+ VA VR M +M
Sbjct: 435 LGACKMHGNVEMGKRVAEHLM-ELAPHDSGSYVAL-SNIYASLGNWEGVAKVRLMMKEMD 492
Query: 478 VRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIE 537
VRK PG SW++++GV+H+F+ D ++ ++ I+ L E++ + GY+P+ +++ ++
Sbjct: 493 VRKDPGCSWIELDGVIHEFLVEDDSHPKSKKIHSMLQEMSRNLILVGYRPNTTQVLTNMD 552
Query: 538 E 538
E
Sbjct: 553 E 553
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 195/534 (36%), Positives = 317/534 (59%), Gaps = 36/534 (6%)
Query: 32 TTKTLFQIHSQIIINGFSQKNYILAKLLAFYV--TSGYLINAHKVFEKTENPSTAIWNQM 89
TT+ L QIH+ I G A+LL F T + A K F + +P+ WN +
Sbjct: 27 TTRHLKQIHAHFIKTGQIHHPLAAAELLKFLTLSTQREIKYARKFFSQIHHPNCFSWNTI 86
Query: 90 IRGHA--------RSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVH 141
IR A + E +Y + D EP+++T+ +L CA+ EG+Q+H
Sbjct: 87 IRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFPCVLKACAKLARIEEGKQLH 146
Query: 142 GRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPAR-SVVSWNSLLKGYVKR 200
G V+ G S+ F+R+NL+ +Y+M G + A +LF +VV WN ++ GYV+
Sbjct: 147 GFVVKLGLVSDEFVRSNLVRVYVMCGA---MKDAHVLFYQTRLEGNVVLWNVMIDGYVRM 203
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
GD+ + ++FD MP+++VVSW MISGCAQNG ++A+ +F++M+ V + V LV+ L
Sbjct: 204 GDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVL 263
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ- 319
A + +G ++LGKW+H + E+N + + VL S ALI MY+ CG I++A VF ++
Sbjct: 264 PAVSRLGAIELGKWVHLFAEKN-EIEIDDVLGS---ALIDMYSKCGSIDKAVQVFEGIRN 319
Query: 320 RRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQ 364
++N ++W+++I G A G A++AL + ++GVLSACSH G V+EGR
Sbjct: 320 KKNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRS 379
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
+ M G+ PRIEHYGCMVDL RAG ++EA L+ NMP+KP+D +L +LL C++H
Sbjct: 380 IYYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVILKALLGACKMH 439
Query: 425 NNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQ 484
N E+ ++A+ L+ P + Y+AL +N++A+ W+ V VR KM ++ +RK PG
Sbjct: 440 GNIEMGERIAKILMGWY-PHDSGSYVAL-SNMFASEGNWEGVVKVRLKMKELDIRKDPGC 497
Query: 485 SWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
SW++++GV+H+F+ D ++ +A I+ L E++ + GY+P+ +++ L ++E
Sbjct: 498 SWIELDGVIHEFLVEDDSHPRAEGIHSMLEEMSDRLRSVGYRPNTTQVLLNMDE 551
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 133/358 (37%), Gaps = 84/358 (23%)
Query: 124 LLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMP 183
L +RC R +Q+H + +G + L+ +S
Sbjct: 18 LFPQISRCKTTRHLKQIHAHFIKTGQIHHPLAAAELLKFLTLS----------------- 60
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQ-------NGKSRQ 236
+ +I A K F ++ H N SW T+I A + S +
Sbjct: 61 ---------------TQREIKYARKFFSQIHHPNCFSWNTIIRALADSDDDDLFHVNSLE 105
Query: 237 ALSLFNEM-RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL---- 291
AL F+ M V ++ L ACA++ ++ GK +H +V + V E V
Sbjct: 106 ALLYFSHMLTDGLVEPNKFTFPCVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLV 165
Query: 292 ------------------------VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
V L N +I Y G++ + +F M ++ VSW
Sbjct: 166 RVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWN 225
Query: 328 SMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQN 372
MI+G A+ G+ +EA+ +T + VL A S G ++ G+ +N
Sbjct: 226 VMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKN 285
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELA 430
I+ ++D++S+ G +D+A + + + K N +++ G +H A A
Sbjct: 286 -EIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNKKNPITWSAIIGGLAMHGRARDA 342
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 196/576 (34%), Positives = 317/576 (55%), Gaps = 53/576 (9%)
Query: 9 ANPATSSKALTTRQIFSLLQIRNTT--KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSG 66
A + L + + L ++ T + L Q+H+ ++ +G Q +Y+ LL Y
Sbjct: 20 AEKNIPTSKLPQKTVLKLFDSKSITSLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPH 79
Query: 67 Y--LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFL 124
+ A KVF NP+ IWN +I+G + K++Y Y +M+ + P+++TY L
Sbjct: 80 FSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMV-IDARPNKFTYPTL 138
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSG-----------GECGVG 173
C+ +EG Q+HG V+ G S+V I++ + +Y G GE V
Sbjct: 139 FKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGESDVV 198
Query: 174 C----------------ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
C A+ LF MP +++ SWN ++ G K G++ A K+FDEM R+
Sbjct: 199 CWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERD 258
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+SW++M+ G G+ ++AL +F +M+R + L + L+AC+ IG + G+W+H+
Sbjct: 259 EISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHA 318
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y++ N S+ + VL AL+ MYA CG ++ + VF +M+ R +W +MI G A G
Sbjct: 319 YLKRN-SIKLDAVL---GTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHG 374
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
A++AL +T +GVL+AC+H GFVD+G + F+ M + +G+ P +EHY
Sbjct: 375 RAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHY 434
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
GCMVDL R+GL EA L+ +MPMKPN AV G+LL CRIH N +LA +V K++ E++
Sbjct: 435 GCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVG-KILLELE 493
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P+ + Y+ L++N+YA R+ DV+ +R+ M G++ PG S V +NG +H+F GD +
Sbjct: 494 PQNSGRYV-LLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGS 552
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ Q IY+ L I + G+ PD S++ I+E
Sbjct: 553 HPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDE 588
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 190/535 (35%), Positives = 318/535 (59%), Gaps = 29/535 (5%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAH--KVF 75
L ++ + +L +N T+ + Q+H++I++NG Q Y+LAKL+ ++ + +F
Sbjct: 45 LESQIVTTLDGCKNLTQ-IKQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIF 103
Query: 76 EKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFR 135
+ P+ ++N +IRG+ E ++S Y M + P +T++ L C
Sbjct: 104 NQVNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVG 163
Query: 136 EGEQVHGR-VLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSL 193
G Q+HG+ +L G+ ++ + +++++Y+ +CG + C R +FD+MP R V+SW L
Sbjct: 164 LGRQIHGQTILVGGFGEDLHVGNSMIDMYI----KCGFLECGRKVFDEMPNRDVISWTEL 219
Query: 194 LKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQ 253
+ YVK G+++ A ++FD +P +++V+WT M+SG AQN K R+A+ F +M+ V D+
Sbjct: 220 ISAYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDE 279
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
+ L+ +SACA++G K WI E++ G+ V+V +ALI MY+ CG + +AY
Sbjct: 280 ITLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVV--GSALIDMYSKCGSVGDAYR 337
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGF 358
VF+ M+ RN S++SMI GFA G +A+ +TF+GVL+ACSH G
Sbjct: 338 VFQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGM 397
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLL 418
V++G Q FE M + +GIKP +HY CMVDL RAG + EA LV+ MP++P+ V G+LL
Sbjct: 398 VEQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALL 457
Query: 419 LGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
CRIH + ++A+ A L E++P Y+ L+AN+YA+ RW DV+ VR+ M G+
Sbjct: 458 GACRIHKSPDIAAIAANHLF-ELEPYCIGNYI-LLANIYASCGRWNDVSTVRKLMRTRGL 515
Query: 479 RKPPGQSWVQI-NGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISEL 532
RK P SW++ G++H+F +GD T+ ++ I + L ++ + +GY+P +S +
Sbjct: 516 RKNPAFSWIESEKGMVHEFFSGDMTHPRSGEIKQALEDLLDRLEAKGYQPHLSSV 570
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 204/583 (34%), Positives = 325/583 (55%), Gaps = 56/583 (9%)
Query: 6 IIPANPATSSKALTTRQIFSLLQIRNTTKT--LFQIHSQIIINGFSQKNYILAKLLAFYV 63
+IP +T + L+ + I LL + TT L Q H+ I+ G Q +YI L+ Y
Sbjct: 19 LIPKGHSTETSKLSHKAILHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYA 78
Query: 64 ---TSGYLI--NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDE 118
T+ YL ++ +VF+ P+ +WN MI+ + P K++ LY +M+ + P++
Sbjct: 79 NVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNK 138
Query: 119 YTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLM------------- 165
YTY +L C+ G+ EG QVH ++ G + I ++ + +Y
Sbjct: 139 YTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDD 198
Query: 166 SGGECGVGC----------------ARLLFDDMPARSVVS-WNSLLKGYVKRGDIDGAWK 208
GGE C AR LF+ MP RS++S WN+++ G+ + G ++ A +
Sbjct: 199 KGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVARE 258
Query: 209 IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGD 268
FDEM R+ +SW+ MI G Q G +AL +F++M++ ++ + L + LSACA +G
Sbjct: 259 FFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGA 318
Query: 269 LKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTS 328
L G+WIH+Y + N S+ + VL +L+ MYA CG I+ A+ VF KM + SW +
Sbjct: 319 LDQGRWIHTYAKRN-SIQLDGVL---GTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNA 374
Query: 329 MITGFAKQGYAQEAL------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIK 376
MI G A G A++A+ +TF+GVL+AC+HGG V +G F M + +G++
Sbjct: 375 MIGGLAMHGRAEDAIDLFSKMDIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVE 434
Query: 377 PRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQK 436
P+IEHYGC+VDL RAGL+ EA +V ++P +P AV G+LL CR H N EL +V K
Sbjct: 435 PQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVG-K 493
Query: 437 LVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQI-NGVLHD 495
++ E++P Q +G L++N+YA A RW++V VR+ M + G++ PG S + + G +H
Sbjct: 494 ILLELEP-QNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHK 552
Query: 496 FVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
F+ GD ++ Q IY+ L ++ + EGY+PD S++ I+E
Sbjct: 553 FIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDE 595
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 196/576 (34%), Positives = 317/576 (55%), Gaps = 53/576 (9%)
Query: 9 ANPATSSKALTTRQIFSLLQIRNTT--KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSG 66
A + L + + L ++ T + L Q+H ++ +G Q +Y+ LL Y
Sbjct: 20 AEKNIPTSKLPQKTVLKLFDSKSITSLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPH 79
Query: 67 Y--LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFL 124
+ A KVF NP+ IWN +I+G + K++Y Y +M+ + P+++TY L
Sbjct: 80 FSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMV-IDARPNKFTYPTL 138
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSG-----------GECGVG 173
C+ +EG Q+HG V+ G S+V I++ +++Y G GE V
Sbjct: 139 FKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGESDVV 198
Query: 174 C----------------ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
C A+ LF MP +++ SWN ++ G K G++ A K+FDEM R+
Sbjct: 199 CWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERD 258
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+SW++M+ G G+ ++AL +F +M+R + L + L+AC+ IG + G+W+H+
Sbjct: 259 EISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHA 318
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y++ N S+ + VL AL+ MYA CG ++ + VF +M+ R +W +MI G A G
Sbjct: 319 YLKRN-SIKLDAVL---GTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHG 374
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
A++AL +T +GVL+AC+H GFVD+G + F+ M + +G+ P +EHY
Sbjct: 375 RAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHY 434
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
GCMVDL R+GL EA L+ +MPMKPN AV G+LL CRIH N +LA +V K++ E++
Sbjct: 435 GCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVG-KILLELE 493
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P+ + Y+ L++N+YA R+ DV+ +R+ M G++ PG S V +NG +H+F GD +
Sbjct: 494 PQNSGRYV-LLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGS 552
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ Q IY+ L I + G+ PD S++ I+E
Sbjct: 553 HPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDE 588
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 203/549 (36%), Positives = 321/549 (58%), Gaps = 47/549 (8%)
Query: 28 QIRN--TTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY----LINAHKVFEKTENP 81
QI N T + L QIH+ I +G + A++L F TS L AHK+F +
Sbjct: 29 QINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQR 88
Query: 82 STAIWNQMIRGHARSETPEKSVYL---YKQMIDKETEPDEYTYSFLLSVCARCGLFREGE 138
+ WN +IRG + S+ + + + Y+ M D+ EP+ +T+ +L CA+ G +EG+
Sbjct: 89 NCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGK 148
Query: 139 QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLF------DDMPARS------ 186
Q+HG L G+ + F+ +NL+ +Y+M G + AR+LF DM +
Sbjct: 149 QIHGLALKYGFGGDEFVMSNLVRMYVMCGF---MKDARVLFYKNIIEKDMVVMTDRRKRD 205
Query: 187 --VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
+V WN ++ GY++ GD A +FD+M R+VVSW TMISG + NG + A+ +F EM
Sbjct: 206 GEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM 265
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYAS 304
++ + + V LV+ L A + +G L+LG+W+H Y E++ + + VL S ALI MY+
Sbjct: 266 KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDS-GIRIDDVLGS---ALIDMYSK 321
Query: 305 CGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGV 349
CG IE+A VF ++ R N ++W++MI GFA G A +A+ + ++ +
Sbjct: 322 CGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINL 381
Query: 350 LSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKP 409
L+ACSHGG V+EGR++F M G++PRIEHYGCMVDL R+GL+DEA + NMP+KP
Sbjct: 382 LTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKP 441
Query: 410 NDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAV 469
+D + +LL CR+ N E+ +VA L+ ++ P + Y+AL +N+YA+ W +V+ +
Sbjct: 442 DDVIWKALLGACRMQGNVEMGKRVANILM-DMVPHDSGAYVAL-SNMYASQGNWSEVSEM 499
Query: 470 RQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDI 529
R +M + +RK PG S + I+GVLH+FV D ++ +A I L EI+ + GY+P
Sbjct: 500 RLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPIT 559
Query: 530 SELFLGIEE 538
+++ L +EE
Sbjct: 560 TQVLLNLEE 568
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 194/501 (38%), Positives = 297/501 (59%), Gaps = 30/501 (5%)
Query: 56 AKLLAFYV--TSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKE 113
+K++AF SG L A VF + NP+T N +IRG+ P +++ Y+ M+ +
Sbjct: 14 SKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQG 73
Query: 114 TEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVG 173
+PD +T+ L CG+ EG+Q+H G+ S+ +I+ LMN+Y G C V
Sbjct: 74 LDPDRFTFPSLFK---SCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCG--CLVS 128
Query: 174 CARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP-HRNVVSWTTMISGCAQNG 232
AR +FD M +SVVSW +++ Y + A K+F M N+ W MI+G ++
Sbjct: 129 -ARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDS 187
Query: 233 KSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLV 292
+ALSLFNEM+ + V D+V + + L AC +G L+LGKW+H Y+E+ + V V
Sbjct: 188 DYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKE----KIEVDV 243
Query: 293 SLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------- 343
+L AL+ MYA CG IE A VF++M ++ ++WT++I G A G +AL
Sbjct: 244 ALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMS 303
Query: 344 ------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDE 397
+TF+GVL+ACSH G V+EG +F M +GI+P IEHYGCMVD+ RAG + E
Sbjct: 304 EVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAE 363
Query: 398 AFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVY 457
A L+QNMPM P+ VL LL CRIH N +A + AQ+L+ E+DP+ Y+ L++N+Y
Sbjct: 364 AEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLI-ELDPKNGGTYV-LLSNIY 421
Query: 458 AAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEIT 517
++ K W+ +R+ M++ ++KPPG S +++ GV+H+FV GD ++ Q+S IY+TL ++
Sbjct: 422 SSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMM 481
Query: 518 MQAMQEGYKPDISELFLGIEE 538
+ GY PD SE+ ++E
Sbjct: 482 RRLKSAGYVPDKSEVLFDMDE 502
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 143/374 (38%), Gaps = 94/374 (25%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H GF+ YI L+ Y G L++A KVF+K N S W MI +A+ +
Sbjct: 96 QLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWD 155
Query: 98 TPEKSVYLYKQ------------MIDKETEPDEY--------------------TYSFLL 125
P +++ L+++ MI+ E +Y T + LL
Sbjct: 156 LPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLL 215
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPA 184
C G G+ +H + +V + T L+++Y +CG + A +F +MP
Sbjct: 216 IACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMY----AKCGSIESAMRVFQEMPE 271
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
+ V++W T +I G A G+ +AL LF+EM
Sbjct: 272 KDVMTW-------------------------------TALIVGLAMCGQGLKALELFHEM 300
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYAS 304
+ + V D + V L+AC+ G + G + + + G +P + ++ M
Sbjct: 301 QMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKY--GIQPS-IEHYGCMVDMLGR 357
Query: 305 CGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACS-HGGFVDEGR 363
G I EA + + M M + +G+LSAC HG V R
Sbjct: 358 AGRIAEAEDLIQNM---------PMAPDY----------FVLVGLLSACRIHGNLVVAER 398
Query: 364 ---QFFECMNQNWG 374
Q E +N G
Sbjct: 399 AAQQLIELDPKNGG 412
>gi|224141419|ref|XP_002324070.1| predicted protein [Populus trichocarpa]
gi|222867072|gb|EEF04203.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 195/526 (37%), Positives = 302/526 (57%), Gaps = 55/526 (10%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLL--AFYVTSGYLIN 70
T+ ++ +Q SL + N L QIH+ +II GF+ L +L+ SG +
Sbjct: 6 TNDRSTNRKQPSSLWKNCNNLLALKQIHATLIIKGFNSNRAALRELIFAGAMTISGAINY 65
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
AH+VF + P +WN M+RG ++S+ P K V LY QM ++ +PD++T+SFLL C R
Sbjct: 66 AHQVFAQITEPDIFMWNTMMRGSSQSKNPSKVVLLYTQMENRGVKPDKFTFSFLLKGCTR 125
Query: 131 CGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSG----------------------- 167
+ G VHG+VL G+ N F+R L+ + G
Sbjct: 126 LEWRKTGFCVHGKVLKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSVVSWSAL 185
Query: 168 -------GECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVS 220
GE GV AR +FD+MP + +VSWN ++ GYVK G+++ A +FDE P ++VV+
Sbjct: 186 TAGYARRGELGV--ARQIFDEMPVKDLVSWNVMITGYVKNGEMENARTLFDEAPEKDVVT 243
Query: 221 WTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVE 280
W TMI+G G+ RQAL +F EMR D+V +++ LSACA++GDL++G+ +H +
Sbjct: 244 WNTMIAGYVLRGEQRQALEMFEEMRNVGECPDEVTMLSLLSACADLGDLQVGRKLHCSIS 303
Query: 281 ENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQ 340
E + R + V L NAL+ MYA CG IE A VF+KM+ ++ +W S+I G A G+A+
Sbjct: 304 E---MTRGDLSVLLGNALVDMYAKCGSIEIALQVFKKMREKDVTTWNSVIGGLAFHGHAE 360
Query: 341 EAL----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGC 384
E++ +TF+GV+ ACSH G V+EGR++F+ M + + I+P + H+GC
Sbjct: 361 ESIKLFAEMQALKNIKPNEITFVGVIVACSHAGNVEEGRRYFKLMRERYDIEPNMIHHGC 420
Query: 385 MVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPE 444
MVDL RAGL+ EAF L+ M ++PN + +LL CR+H N EL ++L+ ++ +
Sbjct: 421 MVDLLGRAGLLSEAFELIAKMEIEPNAIIWRTLLGACRVHGNVELGRLANERLL-KLRRD 479
Query: 445 QAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQIN 490
++ Y+ L++N+YA+A W VR+ M GVRK G+S ++ +
Sbjct: 480 ESGDYV-LLSNIYASAGEWDGAEEVRKLMDDGGVRKEAGRSLIEAD 524
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 203/528 (38%), Positives = 306/528 (57%), Gaps = 30/528 (5%)
Query: 32 TTKTLFQIHSQIIINGFS--QKNYILAKLLAFYVTSGYLINAHKVFEKTEN-PSTAIWNQ 88
+ + LF+I +QII + N I K + + G L ++ +F + P+ +N
Sbjct: 36 SMRQLFEIQAQIIASPIPSIDPNIIAVKFIGVSSSHGNLRHSVLIFNHFLSFPNIFAYNA 95
Query: 89 MIRGHARSETPEKSV-YLYKQMI-DKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLA 146
+++ ++ ++ Y Q++ PDEYT++ +L CA EG++VH V
Sbjct: 96 LLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTK 155
Query: 147 SGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGA 206
G SN+F+R +L++LY G C A+ LFD+M R VVSWN+L+ GY G +D A
Sbjct: 156 YGCESNLFVRNSLVDLYFKVGCNC---IAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKA 212
Query: 207 WKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR-ARVGLDQVALVAALSACAE 265
+FD M +N+VSW+TMISG A+N K A+ LF +M+ + + V LV+ LSACA
Sbjct: 213 RMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAH 272
Query: 266 IGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVS 325
+G L LGKWIH ++ N + V + L NAL MYA CG + EA GVF +M R+ +S
Sbjct: 273 LGALDLGKWIHRFIRRN----KIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVIS 328
Query: 326 WTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMN 370
W+ +I G A GYA EA ++F+G+L+AC+H G VD+G ++F+ M
Sbjct: 329 WSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMP 388
Query: 371 QNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELA 430
Q +GI P+IEHYGC+VDL SRAG +D+A SL+ +MPM+PN V G+LL GCRI+ +AE
Sbjct: 389 QVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERG 448
Query: 431 SQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQIN 490
+V +++ E+D +G L +ANVYA+ R D A+ R +M K PG SW++IN
Sbjct: 449 ERVVWRIL-ELDSNH-SGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEIN 506
Query: 491 GVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+++F GDS++ Q+ IY + E+ + GYKP + I+E
Sbjct: 507 NSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDE 554
>gi|297746342|emb|CBI16398.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 192/523 (36%), Positives = 301/523 (57%), Gaps = 51/523 (9%)
Query: 8 PANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY 67
P N T+ + + SLL+ + L QI SQ+++ G + + ++L+AF S +
Sbjct: 38 PINWNTNHSFVLSNPFLSLLEKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEW 97
Query: 68 --LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKE-TEPDEYTYSFL 124
L + T NP+T WN IRG SE P ++V LYK+++ + T+PD YTY L
Sbjct: 98 RDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLL 157
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSG----------------- 167
CAR L R G ++ G VL G+ S++F+ +++L + G
Sbjct: 158 FKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDL 217
Query: 168 --------GECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
G CG + AR LFD M +++VSW +++ GY + G +D AWK+FDEMP ++V
Sbjct: 218 VSWNSMINGYCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDV 277
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
V W MI G + ++AL+LFNEM+ + D+V +V+ LSAC+++G L +G WIH Y
Sbjct: 278 VPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHY 337
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+E++ + V+L ALI MYA CG+I +A VF+++ RN+++WT++I+G A G
Sbjct: 338 IEKH----ELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGN 393
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
A A+ +TFLG+LSAC HGG V+EGR++F M+ + + P+++HY
Sbjct: 394 AHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYS 453
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
CMVDL RAGL++EA L+++MP++ + V G+L CRIH N + + A KL+ ++DP
Sbjct: 454 CMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLL-QMDP 512
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSW 486
+ Y+ L+AN+Y A+ W++ R+ M + GV K P SW
Sbjct: 513 HDSGIYV-LLANMYGEAEMWKEAGKARKLMRQRGVEKTP-DSW 553
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 204/583 (34%), Positives = 324/583 (55%), Gaps = 56/583 (9%)
Query: 6 IIPANPATSSKALTTRQIFSLLQIRNTTKT--LFQIHSQIIINGFSQKNYILAKLLAFYV 63
+IP +T + L+ + I LL + TT L Q H+ I+ G Q +YI L+ Y
Sbjct: 18 LIPNGHSTETSKLSHKAILHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYA 77
Query: 64 ---TSGYLI--NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDE 118
T+ YL ++ +VF+ P+ +WN MI+ + P K++ LY +M+ P++
Sbjct: 78 NVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNK 137
Query: 119 YTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLM------------- 165
YTY +L C+ G+ EG QVH ++ G + I ++ + +Y
Sbjct: 138 YTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDD 197
Query: 166 SGGECGVGC----------------ARLLFDDMPARSVVS-WNSLLKGYVKRGDIDGAWK 208
GGE C AR LF+ MP RS++S WN+++ G+ + G ++ A +
Sbjct: 198 KGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVARE 257
Query: 209 IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGD 268
FDEM R+ +SW+ MI G Q G +AL +F++M++ ++ + L + LSACA +G
Sbjct: 258 FFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGA 317
Query: 269 LKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTS 328
L G+WIH+Y + N S+ + VL +L+ MYA CG I+ A+ VF KM + SW +
Sbjct: 318 LDQGRWIHTYAKRN-SIQLDGVL---GTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNA 373
Query: 329 MITGFAKQGYAQEAL------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIK 376
MI G A G A++A+ +TF+GVL+AC+HGG V +G F M + +G++
Sbjct: 374 MIGGLAMHGRAEDAIDLFSKMDINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVE 433
Query: 377 PRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQK 436
P+IEHYGC+VDL RAGL+ EA +V ++P +P AV G+LL CR H N EL +V K
Sbjct: 434 PQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVG-K 492
Query: 437 LVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQI-NGVLHD 495
++ E++P Q +G L++N+YA A RW++V VR+ M + G++ PG S + + G +H
Sbjct: 493 ILLELEP-QNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHK 551
Query: 496 FVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
F+ GD ++ Q IY+ L ++ + EGY+PD S++ I+E
Sbjct: 552 FIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDE 594
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 190/521 (36%), Positives = 299/521 (57%), Gaps = 37/521 (7%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H+ ++ G + ++ + L+A Y G A + + + P WN +I GH R
Sbjct: 45 VHAHVVRLGMGRNAHVASSLVAAYTAGGDGAAARALVGECDTPVA--WNALISGHNRGGR 102
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE---GEQVHGRVLASGYCSNVFI 155
+S + M P TY +LS C + R+ G QVHGRV+ SG ++ +
Sbjct: 103 FGESCGSFVDMARAGAAPTPVTYVSVLSACGKGT--RDVLLGMQVHGRVVGSGVLPDLRV 160
Query: 156 RTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP 214
L+++Y EC +G A +FD M RSVVSW SLL G + G +D A +FD MP
Sbjct: 161 ENALVDMY----AECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMP 216
Query: 215 HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKW 274
R+ VSWT MI G + R+AL +F EM+ + V D+ +V+ ++ACA++G L++G+W
Sbjct: 217 ERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEW 276
Query: 275 IHSYVEENFSVGREPVLVS--LNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
+ Y+ R+ + + + NALI MY+ CG IE A VF+ M R+ +WT++I G
Sbjct: 277 VRVYMS------RQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILG 330
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
A GY +EA+ +TF+GVL+AC+H G VD+GR+FF M + + I P
Sbjct: 331 LAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAP 390
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
+ HYGC++DL RAG + EA + MPM PN + G+LL CR+H N+E+ VA++L
Sbjct: 391 NVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVAERL 450
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
+ E+DPE + Y+ L++N+YA RW+DV +R +++ G++K PG S ++++G++H+FV
Sbjct: 451 L-ELDPENSMVYI-LLSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGCSLIEMDGIIHEFV 508
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
AGD ++ + IY L I GY PD++E+F+ + E
Sbjct: 509 AGDQSHPMSKEIYSKLESIISDLNNVGYFPDVTEVFVEVAE 549
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 154/399 (38%), Gaps = 111/399 (27%)
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARC----GLFREGEQVHGRVLASGYCSNVFI 155
E +V Y +M+ + PD YT+ LL AR G VH V+ G N +
Sbjct: 1 EDAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHV 60
Query: 156 RTNLMNLYLMSG---------GECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGA 206
++L+ Y G GEC D P V+WN+L
Sbjct: 61 ASSLVAAYTAGGDGAAARALVGEC----------DTP----VAWNAL------------- 93
Query: 207 WKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAE- 265
ISG + G+ ++ F +M RA V V+ LSAC +
Sbjct: 94 ------------------ISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKG 135
Query: 266 IGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVS 325
D+ LG +H V G P L + NAL+ MYA C ++ A+ VF MQ R+ VS
Sbjct: 136 TRDVLLGMQVHGRV---VGSGVLPDL-RVENALVDMYAECADMGSAWKVFDGMQVRSVVS 191
Query: 326 WTSMITGFAKQGYAQEAL------------------------------------------ 343
WTS+++G A+ G EA
Sbjct: 192 WTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNV 251
Query: 344 ----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAF 399
T + V++AC+ G ++ G M++ GIK ++D++S+ G ++ A
Sbjct: 252 SADEFTMVSVITACAQLGALEMGEWVRVYMSRQ-GIKMDAFVGNALIDMYSKCGSIERAL 310
Query: 400 SLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
+ + M + + +++LG ++ E A ++ +++
Sbjct: 311 DVFKGMHHR-DKFTWTAIILGLAVNGYEEEAIEMFHRMI 348
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 130/306 (42%), Gaps = 9/306 (2%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
Q+H +++ +G + L+ Y + +A KVF+ + S W ++ G AR
Sbjct: 143 MQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARL 202
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
+++ + + D+ E D +++ ++ FRE ++ + S ++ F
Sbjct: 203 GQVDEA----RDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTM 258
Query: 157 TNLMNLYLMSGG-ECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
+++ G E G + N+L+ Y K G I+ A +F M H
Sbjct: 259 VSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHH 318
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
R+ +WT +I G A NG +A+ +F+ M R D+V + L+AC G + G+
Sbjct: 319 RDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREF 378
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFA 334
+ E +++ P +V +I + G+I EA +M N+ W +++
Sbjct: 379 FLSMIEAYNIA--PNVVHY-GCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACR 435
Query: 335 KQGYAQ 340
G ++
Sbjct: 436 VHGNSE 441
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 199/559 (35%), Positives = 310/559 (55%), Gaps = 44/559 (7%)
Query: 7 IPANPATSSKA--------LTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKL 58
IP +PAT S ++T ++ L+ T L QIH+ + +G + KL
Sbjct: 9 IPPSPATGSPPTTSTTHHFISTNRLAVLIDKSKTISHLLQIHAVLFRHGLDHHPILNFKL 68
Query: 59 LAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDE 118
Y + G L + +F +T+NPS W +I GHA E+++ Y QM+ + EP+
Sbjct: 69 QRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNA 128
Query: 119 YTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLL 178
+T+S +L +C G+ +H + + G+ S++++RT L+++Y G V A+ L
Sbjct: 129 FTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGD---VVSAQQL 181
Query: 179 FDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQAL 238
FD MP +S+VS ++L Y K G++D A +FD M R+ V W MI G QNG +AL
Sbjct: 182 FDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEAL 241
Query: 239 SLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEEN---FSVGREPVLVSLN 295
LF M +A+ ++V +++ LSAC ++G L+ G+W+HSY+E N F+ V +
Sbjct: 242 VLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFN-------VHVG 294
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------ 343
AL+ MY+ CG +E+A VF K+ ++ V+W SMI G+A G++QEAL
Sbjct: 295 TALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLH 354
Query: 344 ---LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFS 400
+TF+G+LSAC H G+V EG F M +GI+P+IEHYGCMV+L RAG +++A+
Sbjct: 355 PTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYE 414
Query: 401 LVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQA-AGYLALVANVYAA 459
LV+NM ++P+ + G+LL CR+H L ++ + LV D A +G L++N+YAA
Sbjct: 415 LVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLV---DQNLANSGTYILLSNIYAA 471
Query: 460 AKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
W VA +R M GV+K PG S +++N +H+F+AG + + IY L EI
Sbjct: 472 VGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGW 531
Query: 520 AMQEGYKPDISELFLGIEE 538
GY P + I E
Sbjct: 532 LKSHGYTPQTDIVLHDIGE 550
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 185/509 (36%), Positives = 287/509 (56%), Gaps = 31/509 (6%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H+ ++ G + ++ L+ Y G A + + E + +WN +I GH R
Sbjct: 65 VHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRR 124
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR-CGLFREGEQVHGRVLASGYCSNVFIRT 157
++ + M P TY +LS C + G G QVHGRV+ SG ++ +
Sbjct: 125 FGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVEN 184
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L+++Y EC + A LFD M RSVVSW SLL G + G +D A +F MP R
Sbjct: 185 ALVDMY----AECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPER 240
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
+ VSWT MI G Q + R+AL +F EM+ + V D+ +V+ ++ACA++G L++G+W+
Sbjct: 241 DTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVR 300
Query: 277 SYVEENFSVGREPVLVS--LNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
Y+ R+ + + + NALI MY+ CG IE A VF+ M R+ +WT++I G A
Sbjct: 301 VYMS------RQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLA 354
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
GY +EA+ +TF+GVL+AC+H G VD+GR+FF M + + I P +
Sbjct: 355 VNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNV 414
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
HYGC++DLF RAG + EA + MPM PN + G+LL CR+H N+E+ V ++L+
Sbjct: 415 VHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLL- 473
Query: 440 EIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG 499
++DPE + Y L++N+YA RW+DV +R +++ G++K PG S +++NG++H+FVAG
Sbjct: 474 QMDPENSTVY-TLLSNIYAKCNRWEDVRRLRHTIMEKGIKKEPGCSLIEMNGIIHEFVAG 532
Query: 500 DSTYKQASLIYKTLGEITMQAMQEGYKPD 528
D ++ + IY L I GY PD
Sbjct: 533 DQSHPMSKEIYCKLESIINDLNNVGYFPD 561
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 157/386 (40%), Gaps = 87/386 (22%)
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
E +V Y +M+ + PD YT+ LL AR VH V+ G N + T+L
Sbjct: 25 EDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSL 84
Query: 160 MNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVV 219
+ Y G AR L + + V WN+L+ G+ +
Sbjct: 85 VTAYAAGG---DGAAARALLSERERDTPVVWNALISGHNR-------------------- 121
Query: 220 SWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAE-IGDLKLGKWIHSY 278
C + G +A F +M RA V V+ LSAC + GD+ LG +H
Sbjct: 122 --------CRRFG---EACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGR 170
Query: 279 VEENFSVGREPVLVSLNNALIHMYASC-------------------------------GE 307
V G P L + NAL+ MYA C G
Sbjct: 171 V---VGSGVLPDL-RVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGR 226
Query: 308 IEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSA 352
++EA +F +M R+TVSWT+MI G+ + +EAL T + V++A
Sbjct: 227 VDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITA 286
Query: 353 CSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDA 412
C+ G ++ G M++ GIK ++D++S+ G ++ A + ++M + +
Sbjct: 287 CAQLGALEMGEWVRVYMSRQ-GIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHR-DKF 344
Query: 413 VLGSLLLGCRIHNNAELASQVAQKLV 438
+++LG ++ E A ++ +++
Sbjct: 345 TWTAIILGLAVNGYGEEAIEMFHRMI 370
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 133/306 (43%), Gaps = 9/306 (2%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
Q+H +++ +G + L+ Y + +A K+F+ + S W ++ G R
Sbjct: 165 MQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRL 224
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
+++ L+ +M +++T +++ ++ + FRE ++ + S ++ F
Sbjct: 225 GRVDEARDLFGRMPERDT----VSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTM 280
Query: 157 TNLMNLYLMSGG-ECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
+++ G E G + N+L+ Y K G I+ A +F +M H
Sbjct: 281 VSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHH 340
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
R+ +WT +I G A NG +A+ +F+ M D+V + L+AC G + G+
Sbjct: 341 RDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREF 400
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFA 334
+ E +++ P +V +I ++ G+I EA +M N+ W +++
Sbjct: 401 FLSMRETYNIA--PNVVHY-GCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACR 457
Query: 335 KQGYAQ 340
G ++
Sbjct: 458 VHGNSE 463
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 189/539 (35%), Positives = 313/539 (58%), Gaps = 32/539 (5%)
Query: 21 RQIFSLLQIRNTTKTLFQIHSQIIIN-----GFSQKNYILAKLLAFYVTSGYLINAHKVF 75
R F L ++ T+ + + ++++N GF ++ + + + A KVF
Sbjct: 107 RFTFPFL-LKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVF 165
Query: 76 EKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFR 135
+ + WN M+ G+ R + +KS L+ +M + P+ T +LS C++
Sbjct: 166 DMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLE 225
Query: 136 EGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLL 194
G+ ++ + N+ + L++++ CG + A+ +FD+M R V+SW S++
Sbjct: 226 GGKHIYKYINGGIVERNLILENVLIDMF----AACGEMDEAQSVFDNMKNRDVISWTSIV 281
Query: 195 KGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQV 254
G+ G ID A K FD++P R+ VSWT MI G + + +AL+LF EM+ + V D+
Sbjct: 282 TGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEF 341
Query: 255 ALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGV 314
+V+ L+ACA +G L+LG+W+ +Y+++N S+ + + NALI MY CG + +A V
Sbjct: 342 TMVSILTACAHLGALELGEWVKTYIDKN-SIKNDTFV---GNALIDMYFKCGNVGKAKKV 397
Query: 315 FRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFV 359
F++M ++ +WT+MI G A G+ +EAL +T++GVL AC+H G V
Sbjct: 398 FKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMV 457
Query: 360 DEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLL 419
++G+ FF M GIKP + HYGCMVDL RAG ++EA ++ NMP+KPN V GSLL
Sbjct: 458 EKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLG 517
Query: 420 GCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVR 479
CR+H N +LA ++A K + E++PE A Y+ L+ N+YAA KRW+++ VR+ M++ G++
Sbjct: 518 ACRVHKNVQLA-EMAAKQILELEPENGAVYV-LLCNIYAACKRWENLRQVRKLMMERGIK 575
Query: 480 KPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
K PG S +++NG +++FVAGD ++ Q+ IY L + ++ GY PD SE+FL + E
Sbjct: 576 KTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQDLIKAGYSPDTSEVFLDLGE 634
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 187/403 (46%), Gaps = 70/403 (17%)
Query: 25 SLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVT--SGYLINAHKVFEKTENPS 82
SLL+ + L QIHS I G S +++AF SG +I A +VF+ P+
Sbjct: 12 SLLEKCKSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPT 71
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHG 142
IWN MI+G++R P+ V +Y M+ +PD +T+ FLL R + G+ +
Sbjct: 72 LFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLN 131
Query: 143 RVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRG 201
+ G+ SN+F++ ++++ + C V AR +FD A VV+WN +L GY +
Sbjct: 132 HAVKHGFDSNLFVQKAFIHMFSL----CRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVK 187
Query: 202 DIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALS 261
+ +F EM R V + V LV LS
Sbjct: 188 QFKKSKMLFIEMEKRGVSP-------------------------------NSVTLVLMLS 216
Query: 262 ACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR 321
AC+++ DL+ GK I+ Y+ V R + L N LI M+A+CGE++EA VF M+ R
Sbjct: 217 ACSKLKDLEGGKHIYKYINGGI-VERNLI---LENVLIDMFAACGEMDEAQSVFDNMKNR 272
Query: 322 NTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
+ +SWTS++TGFA G +D R++F+ + + +
Sbjct: 273 DVISWTSIVTGFANIGQ--------------------IDLARKYFDQIPERDYVS----- 307
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPM---KPNDAVLGSLLLGC 421
+ M+D + R EA +L + M M KP++ + S+L C
Sbjct: 308 WTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTAC 350
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 181/519 (34%), Positives = 298/519 (57%), Gaps = 33/519 (6%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEK---TENPSTAIWNQMIRGHAR 95
+H+ ++ G ++ + L+ Y G A + + + +WN +I GH R
Sbjct: 41 VHAHVVKFGMELNAHVASSLVLMYAARGDGAVARTLLDAWPARGGDTPVVWNALISGHRR 100
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
S S + M+ P TY +LS C + G QVH V+ASG ++ +
Sbjct: 101 SRQFRLSCCSFVDMVRTGVVPTPVTYITVLSACGKDKYIWLGMQVHKCVVASGVLPDLKV 160
Query: 156 RTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP 214
L+++Y EC + A LF+ M R+ VSW S++ G+++ G +D A +FD MP
Sbjct: 161 GNALIDMY----AECSEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQVDQARTLFDCMP 216
Query: 215 HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKW 274
R+ VSWT MI G Q G+ R+AL +F EM+ ++V D+ +V+ ++ACA++G L+ G+W
Sbjct: 217 ERDTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTACAQLGALETGEW 276
Query: 275 IHSYVEENFSVGREPVLVS--LNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
Y+ R + + + NAL+ MY+ CG I++A GVF++M R+ +WT++I G
Sbjct: 277 ARIYMS------RHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRDKFTWTAVILG 330
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
A G+ +EA+ +TF+GVL+AC+H G VD+GR FF M ++GI P
Sbjct: 331 LAVNGHGEEAINMFYRMLRVFEAPDEVTFIGVLTACTHAGLVDKGRDFFLSMTGSYGIAP 390
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
+ H+GC++DL RAG + EA + NMPM+PN A+ G+LL CR+H N+E+ A+ L
Sbjct: 391 NVMHFGCLIDLLGRAGKLKEALETIGNMPMRPNSAIWGTLLAACRVHGNSEIGQLAAEHL 450
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
+ E+D E Y+ L++N+YA + RW+DV +RQ +++ G++K PG S +++NG +H+F+
Sbjct: 451 L-ELDTENGMVYI-LLSNLYAKSNRWEDVRRLRQVIMEKGIKKEPGCSLIEMNGTIHEFI 508
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGI 536
AGD ++ + IY L ++ GY PD++E+F+ +
Sbjct: 509 AGDRSHPMSKEIYSKLDKVLTDLKDAGYVPDLTEIFVQV 547
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 139/330 (42%), Gaps = 19/330 (5%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
Q+H ++ +G + L+ Y + A ++FE E +T W +I G R
Sbjct: 143 MQVHKCVVASGVLPDLKVGNALIDMYAECSEMDAAWELFEGMEVRNTVSWTSVISGFLRL 202
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG-----EQVHGRVLASGYCS 151
+++ L+ M +++T +++ ++ + G FRE E +V A + +
Sbjct: 203 GQVDQARTLFDCMPERDT----VSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEF-T 257
Query: 152 NVFIRTNLMNLYLMSGGECGVGCARLLFDDMPAR-SVVSWNSLLKGYVKRGDIDGAWKIF 210
V + T L + GE AR+ + N+L+ Y K G I A +F
Sbjct: 258 MVSVVTACAQLGALETGE----WARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVF 313
Query: 211 DEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLK 270
EM R+ +WT +I G A NG +A+++F M R D+V + L+AC G +
Sbjct: 314 KEMYIRDKFTWTAVILGLAVNGHGEEAINMFYRMLRVFEAPDEVTFIGVLTACTHAGLVD 373
Query: 271 LGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSM 329
G+ ++ S G P ++ LI + G+++EA M R N+ W ++
Sbjct: 374 KGR--DFFLSMTGSYGIAPNVMHF-GCLIDLLGRAGKLKEALETIGNMPMRPNSAIWGTL 430
Query: 330 ITGFAKQGYAQEALLTFLGVLSACSHGGFV 359
+ G ++ L +L + G V
Sbjct: 431 LAACRVHGNSEIGQLAAEHLLELDTENGMV 460
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 203/565 (35%), Positives = 311/565 (55%), Gaps = 57/565 (10%)
Query: 22 QIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLIN-AHKVFEKTEN 80
+ S LQ +T+ L +IH+Q+II G + +I K + Y S I+ A VF
Sbjct: 29 KTLSALQSCKSTEDLKKIHAQLIITGQIKDTFIATKTVESYAVSARNIDYAFWVFVGINY 88
Query: 81 PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
P + W MIRG ++ PEK++ Y M + E +++T+ F+L ++EG V
Sbjct: 89 PDSYSWTTMIRGFVEAKNPEKALEFYGLMRQRGVELNKFTFLFVLKAYGLRPSYQEGRIV 148
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECG--------------------VGC------ 174
HG+++ G+C +VF R L+++YL G GC
Sbjct: 149 HGKLVKVGFCYDVFTRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMITGCFGCGDT 208
Query: 175 --ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNG 232
AR LF +MP R+V SWN+++ GY K G +D A +FD MP R+VVSW +MIS QNG
Sbjct: 209 ERARRLFGEMPERNVGSWNAVVGGYSKLGHVDIARSLFDLMPERDVVSWGSMISAYVQNG 268
Query: 233 KSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLV 292
++ +AL LF EM A V D + + + LSACA+IG L +G+WIH+Y++ S R V
Sbjct: 269 RAAEALELFKEMMLAGVSADSIIITSILSACAQIGALDMGRWIHAYMKR--SKLRNDVF- 325
Query: 293 SLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------- 343
L+ AL+ MYA CG I+ A+GVF M R+N SW +M++G A G+ AL
Sbjct: 326 -LDTALVDMYAKCGCIDTAFGVFNTMPRKNLCSWNAMLSGLAIHGHGFAALELFKQMEST 384
Query: 344 ------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDE 397
+TF+ VLSACSH G V+EG + F M++ + I P++EHYGCMVD+ R GL++E
Sbjct: 385 GVGPNDITFVAVLSACSHIGSVEEGWKKFNQMDKEFNITPKVEHYGCMVDILCRQGLINE 444
Query: 398 AFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVA---QKLVAEIDPEQAAGYLALVA 454
A +++ MP++PN + G+LL C++H + V QKLV+E G L++
Sbjct: 445 AKEMIRTMPLEPNVVIWGALLNACKVHGYTNVGEDVVGYIQKLVSE-----DGGCYVLLS 499
Query: 455 NVYAAAKRWQDVAAVRQKMIKMGV-RKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTL 513
N++AA +W +V R+ M +MGV +K PG S ++++ V+HDF A D + + + +
Sbjct: 500 NIFAAKSQWNEVEKTRKMMKQMGVEKKIPGYSSIELDSVVHDFFAEDRLHSKWREVSTVI 559
Query: 514 GEITMQAMQEGYKPDISELFLGIEE 538
+ +GY+ + S + I+E
Sbjct: 560 ERLNTHLEVKGYEANPSLVLYNIDE 584
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 195/551 (35%), Positives = 319/551 (57%), Gaps = 38/551 (6%)
Query: 9 ANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYL 68
+NP S K+L +QI SLLQ + IH+Q+I NG SQ +++ +LL +
Sbjct: 39 SNP-KSLKSLDQKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAI 97
Query: 69 INAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVC 128
A ++F+ T NP+ ++ +I G S +++ LY +M+ + PD Y + +L C
Sbjct: 98 DYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKAC 157
Query: 129 ARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSV 187
REG +VH R L G+ SN +R +M LY G+CG +G AR +F++MP V
Sbjct: 158 GSQLALREGREVHSRALKLGFSSNRLVRLRIMELY----GKCGELGDARRVFEEMP-EDV 212
Query: 188 VSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRA 247
V+ ++ Y +G ++ A +F + ++ V WT MI G +N ++ +AL F M+
Sbjct: 213 VASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGE 272
Query: 248 RVGLDQVALVAALSACAEIGDLKLGKWIHSY-----VEENFSVGREPVLVSLNNALIHMY 302
V ++ +V LSAC+++G L++G+W+HSY +E N VG NALI+MY
Sbjct: 273 NVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVG---------NALINMY 323
Query: 303 ASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFL 347
+ CG I+EA VF +M+ R+ +++ +MI+G + G +++A+ +TF+
Sbjct: 324 SRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFV 383
Query: 348 GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM 407
GVL+ACSHGG VD G + F M +++ ++P+IEHYGCMVDL R G ++EA+ L++ M M
Sbjct: 384 GVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKM 443
Query: 408 KPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVA 467
P+ +LG+LL C++H N EL QVA++L E + +G L+++VYA++ +W++ A
Sbjct: 444 TPDHIMLGTLLSACKMHKNLELGEQVAKEL--EDRGQADSGTYVLLSHVYASSGKWKEAA 501
Query: 468 AVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
VR KM + G++K PG S +++N +H+F+ GD + Q IY+ L E+ EGY P
Sbjct: 502 QVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKLEELNRLLRLEGYHP 561
Query: 528 DISELFLGIEE 538
+ + IE+
Sbjct: 562 EKEVVLQDIED 572
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 197/581 (33%), Positives = 312/581 (53%), Gaps = 84/581 (14%)
Query: 10 NPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLI 69
NP SK Q S L ++ + QIH+Q++ +++++ KL+A + +
Sbjct: 7 NPTWVSKRRLLEQKISDLHRCSSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMT 66
Query: 70 NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
A VF + ++P ++N +IR H R+ P + ++ +M D D +TY FLL C+
Sbjct: 67 LAVNVFNQIQDPDVLLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACS 126
Query: 130 RCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYL------------------------- 164
R E +H +V G+C ++F+ +L++ Y
Sbjct: 127 GKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDTVSW 186
Query: 165 --MSGGECGVGC---ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVV 219
M GG VG AR LFD+MP R VSWN++L GYVK G+++ A+++F++MP RNVV
Sbjct: 187 NSMIGGLVKVGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEKMPARNVV 246
Query: 220 SWTTM-------------------------------ISGCAQNGKSRQALSLFNEMRRAR 248
SW+TM ISG A+ G ++ A++L+N+M A
Sbjct: 247 SWSTMVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAG 306
Query: 249 VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEI 308
+ D +++ LSACA G L LGK +H+ +E PV +NALI MYA CG +
Sbjct: 307 LKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPV----SNALIDMYAKCGSL 362
Query: 309 EEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSAC 353
E A +F M R++ VSW ++I G A G+ ++AL +TF+GVL AC
Sbjct: 363 ENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCAC 422
Query: 354 SHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAV 413
+H GFVDEG +F M +++G+ P +EHYGCMVDL R G + EAF LV +MP++PN +
Sbjct: 423 THAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAII 482
Query: 414 LGSLLLGCRIHNNAELASQVAQKLV-AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQK 472
G+LL CR+H+ LA +V +LV +E+ +G L++++N+YAAA W + A +R +
Sbjct: 483 WGTLLGACRMHSATGLAEEVFDRLVKSELSD---SGNLSMLSNIYAAAGDWDNFANIRLR 539
Query: 473 MIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTL 513
M ++KP G S ++++ +H+F D ++ ++ IYKT+
Sbjct: 540 MKSTSIQKPSGGSSIEVDDEVHEFTVFDRSHPKSDRIYKTI 580
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 205/549 (37%), Positives = 302/549 (55%), Gaps = 66/549 (12%)
Query: 8 PANPATSSKALTTRQIFSLLQIRNTTK-TLFQIHSQIIINGFSQKNYILAKLLAFYVTS- 65
P NP T + SLLQ ++K L QIH+ I +G S N + K L F + S
Sbjct: 13 PENPLT--------KCISLLQFCASSKHKLKQIHAFSIRHGVSLNNPDMGKHLIFTIVSL 64
Query: 66 -GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFL 124
+ A+ VF NP+ WN +IRG+A S+ P + Y+QM+ EPD +TY FL
Sbjct: 65 SAPMSYAYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFL 124
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPA 184
L ++ REGE +H + +G+ S VF++
Sbjct: 125 LKAISKSLNVREGEAIHSVTIRNGFESLVFVQ---------------------------- 156
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
NSLL Y GD + A+K+F+ M R++V+W +MI+G A NG+ +AL+LF EM
Sbjct: 157 ------NSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREM 210
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYAS 304
V D +V+ LSA AE+G L+LG+ +H Y+ VG + N+L+ +YA
Sbjct: 211 SVEGVEPDGFTVVSLLSASAELGALELGRRVHVYL---LKVGLSKN-SHVTNSLLDLYAK 266
Query: 305 CGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGV 349
CG I EA VF +M RN VSWTS+I G A G+ +EAL +TF+GV
Sbjct: 267 CGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGV 326
Query: 350 LSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKP 409
L ACSH G +DEG ++F M + GI PRIEHYGCMVDL SRAGL+ +A+ +QNMP++P
Sbjct: 327 LYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQP 386
Query: 410 NDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAV 469
N + +LL C IH + L ++A+ + ++P+ + Y+ L++N+YA+ +RW DV +
Sbjct: 387 NAVIWRTLLGACTIHGHLGLG-EIARSHLLNLEPKHSGDYV-LLSNLYASERRWSDVQVI 444
Query: 470 RQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDI 529
R+ M+K GV+K PG S V++ +++F GD ++ Q+ +Y L +IT EGY P
Sbjct: 445 RRSMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELLKLEGYVPHT 504
Query: 530 SELFLGIEE 538
+ + IEE
Sbjct: 505 ANVLADIEE 513
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 185/516 (35%), Positives = 304/516 (58%), Gaps = 32/516 (6%)
Query: 44 IINGFSQKNYILAK-LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKS 102
+I+GF N + K + + G + A K+F+ + WN ++ G+ R + E+S
Sbjct: 162 VIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEES 221
Query: 103 VYLYKQMIDKETE---PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCS-NVFIRTN 158
L+ +M +K+ E P+ T +LS C++ G+ ++ + + G N+ +
Sbjct: 222 KRLFIEM-EKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENA 280
Query: 159 LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L++++ CG + AR +FD+M R V+SW S++ G+ ID A K FD+MP R+
Sbjct: 281 LIDMF----ASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERD 336
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VSWT MI G + + ++ L+LF +M+ + V D+ +V+ L+ACA +G L+LG+W +
Sbjct: 337 YVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKT 396
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y+++N + + + NALI MY CG +E+A +F +MQ+++ +WT+MI G A G
Sbjct: 397 YIDKN-KIKNDTFI---GNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNG 452
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+ +EAL +T++GV+ AC+H G V +G+ FF M GIKP + HY
Sbjct: 453 HGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHY 512
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
GCMVDL RAG + EA ++ NMP+KPN V GSLL CR+H N +LA A +++ E++
Sbjct: 513 GCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEIL-ELE 571
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
PE A Y+ L+ N+YAA K+W+++ VR+ M++ G++K PG S +++NG++++FVAGD +
Sbjct: 572 PENGAVYV-LLCNIYAACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKS 630
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ Q+ IY L + GY PD SE+FL + E
Sbjct: 631 HPQSKEIYAKLENMKQDLSNAGYSPDTSEVFLDVGE 666
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/405 (31%), Positives = 200/405 (49%), Gaps = 70/405 (17%)
Query: 25 SLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVT--SGYLINAHKVFEKTENPS 82
SLL+ NT + QIHSQ I G S + L K++ F T SG + A KVF++ PS
Sbjct: 40 SLLETCNTMYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPS 99
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHG 142
IWN MI+G++R E V LYK M+ +PD +T+ FLL + + G+ +
Sbjct: 100 VFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLN 159
Query: 143 RVLASGYC-SNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKR 200
+ G+ SN+F++ ++L+ + CG V AR +FD VV+WN +L GY +
Sbjct: 160 HAVIHGFLDSNLFVQKGFIHLFSL----CGLVNYARKIFDMGDGWEVVTWNVVLSGYNRF 215
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
+ + ++F EM E + V + V LV L
Sbjct: 216 KRYEESKRLFIEM-----------------------------EKKCECVSPNSVTLVLML 246
Query: 261 SACAEIGDLKLGKWIHS-YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
SAC+++ DL GK I++ Y++E EP L+ L NALI M+ASCGE++ A GVF +M+
Sbjct: 247 SACSKLKDLVGGKCIYNKYIKEGIV---EPNLI-LENALIDMFASCGEMDAARGVFDEMK 302
Query: 320 RRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
R+ +SWTS++TGFA + C +D R++F+ M + +
Sbjct: 303 TRDVISWTSIVTGFA----------------NTCR----IDLARKYFDQMPERDYVS--- 339
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPM---KPNDAVLGSLLLGC 421
+ M+D + R E +L ++M M KP++ + S+L C
Sbjct: 340 --WTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTAC 382
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 197/522 (37%), Positives = 289/522 (55%), Gaps = 54/522 (10%)
Query: 14 SSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLL--AFYVTSGYLINA 71
+ K+ + +Q L + T TL QIH+ +I+ GF+ L +L+ + SG + A
Sbjct: 7 TDKSPSRQQRSQLWRSCTTIGTLKQIHASMIVKGFNSNTSALRELIYASSIAISGTMAYA 66
Query: 72 HKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARC 131
H++F P T +WN MIRG A+S +P ++ LY QM + PD++T+ F+L C R
Sbjct: 67 HQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVLKACTRL 126
Query: 132 GLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSG------------------------ 167
+ G VHGRV G+ SN F+R L+ + G
Sbjct: 127 CWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALT 186
Query: 168 ------GECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSW 221
GE GV AR LFD+MP + +VSWN ++ GY KRG+++ A K+FDE+P R+VV+W
Sbjct: 187 AGYARRGELGV--ARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTW 244
Query: 222 TTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE 281
MI+G G ++QAL +F EMR D+V +++ LSAC ++GDL G+ IH + E
Sbjct: 245 NAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISE 304
Query: 282 NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQE 341
+G + V L NALI MYA CG I A VF+ M+ ++ +W S++ G A G+A++
Sbjct: 305 ---MGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEK 361
Query: 342 AL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMV 386
++ +TF+GVL ACSH G V+EGRQ+F+ M + I+P I HYGCMV
Sbjct: 362 SIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMV 421
Query: 387 DLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQA 446
DL RAGL++EAF + M ++PN V +LL CRIH N EL + +L+ E
Sbjct: 422 DLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLLKMRHDE-- 479
Query: 447 AGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
+G L++N+YA+ W V VR+ M GVRK G S ++
Sbjct: 480 SGDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLIE 521
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 214/592 (36%), Positives = 327/592 (55%), Gaps = 74/592 (12%)
Query: 5 EIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKL------ 58
+I A+P T L L+ T L Q+H QI NG Q L KL
Sbjct: 15 QIKEADPMTKDSCLNES-----LRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAE 69
Query: 59 LAFYVTSGYLINAHKVFEKTENPSTAIW--NQMIRGHARSETPEKSVYLYKQMIDKETEP 116
+A + Y A ++F++ A++ N +IRG++ + +++ LY +M+ P
Sbjct: 70 IASPESLDYARKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTP 129
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCA 175
+ YT+ F+LS C + F EG QVHG V+ G +VFI+ L++ Y ECG +
Sbjct: 130 NHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFY----AECGHMDHG 185
Query: 176 RLLFDDMPARSVVSWNSLLKG-----------------------------YVKRGDIDGA 206
+F+ M R+VVSW SL+ G Y+K G ID A
Sbjct: 186 HKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMLNKVMVNALVDMYMKCGAIDAA 245
Query: 207 WKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEI 266
++FDE RN+V + T++S A+ G +R+AL++ +EM + D+V +++A+SA A++
Sbjct: 246 KRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQL 305
Query: 267 GDLKLGK-----WIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR 321
DL GK W+H+Y+E+N P + LN AL+ M+A CG+ + A VF KM R
Sbjct: 306 VDLFYGKVCHGYWVHTYIEKNGI----PCDMRLNTALVDMFARCGDPQSAMQVFNKMTER 361
Query: 322 NTVSWTSMITGFAKQGYAQEA---------------LLTFLGVLSACSHGGFVDEGRQFF 366
+ +WT+ I A +G + A ++ F+ VL+ACSHGG V++G F
Sbjct: 362 DVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIF 421
Query: 367 ECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNN 426
M ++ GI P+IEHYGCMVDL RAGL+ EAF L+++MPM+PND V GSLL CR+H N
Sbjct: 422 SLM-EDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKN 480
Query: 427 AELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSW 486
E+A+ A++ + E+ P Q AG L++N+YA+A +W DVA VR + + GVRK PG S
Sbjct: 481 VEMATYAAER-INELAP-QRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSS 538
Query: 487 VQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
VQ+NGV+H+F +GD ++ + + I L E+ + G+ PD+S + L ++E
Sbjct: 539 VQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDLSNVLLDVDE 590
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 186/481 (38%), Positives = 283/481 (58%), Gaps = 25/481 (5%)
Query: 47 GFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLY 106
GF + + L+ FY G L NA +VF+++ + W MI G+A + E+++ ++
Sbjct: 287 GFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVF 346
Query: 107 KQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMS 166
+ M+ EP+E T ++S C+ G G++VH +V ++ + L+++Y+
Sbjct: 347 ELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKC 406
Query: 167 GGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMIS 226
+C V AR LFD M + V SW S++ GY K GD++ A + FD+ P +N V W+ MI+
Sbjct: 407 --DCLVD-ARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIA 463
Query: 227 GCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVG 286
G +QN K +++L LF+EM V + LV+ LSAC ++ L LG WIH Y F VG
Sbjct: 464 GYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQY----FVVG 519
Query: 287 RE-PVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-- 343
+ P+ V+L NA++ MYA CG I+ A VF M RN +SW +MI G+A G A++A+
Sbjct: 520 KIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINV 579
Query: 344 -------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFS 390
+TF+ +L+ACSHGG + EGR++F+ M + +GIKP HY CMVDL
Sbjct: 580 FDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLG 639
Query: 391 RAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYL 450
R GL++EA+ L+ NMPM+P +A G+LL CR+H N ELA A L+ +DPE + Y+
Sbjct: 640 RTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNVELARLSAHNLL-RLDPEDSGIYV 698
Query: 451 ALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIY 510
L+AN A ++W DV VR M GV+K PG S ++I+G +F+ D ++ Q+ IY
Sbjct: 699 -LLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYSLIEIDGGFVEFLVADESHPQSEEIY 757
Query: 511 K 511
K
Sbjct: 758 K 758
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 161/332 (48%), Gaps = 40/332 (12%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAF--YVTSGYLIN 70
+ + + T +++ +T + L QI +++ + G + +++++AF SG L
Sbjct: 150 SPTNVIITNPTLLIMESCSTMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHY 209
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
AH +F + E P+T +WN MIRG+ + P + + M E D ++ F L C +
Sbjct: 210 AHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQ 269
Query: 131 CGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSW 190
EGE V+ V G+ + +R L++ Y G + AR +FD+ + VV+W
Sbjct: 270 FETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERG---LLKNARQVFDESSDKDVVTW 326
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG 250
+++ GY A + S +A+ +F M + V
Sbjct: 327 TTMIDGY-------------------------------AAHDCSEEAMEVFELMLLSHVE 355
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEE 310
++V L+A +SAC+++G+L++GK +H VEE +SL+NAL+ MY C + +
Sbjct: 356 PNEVTLIAVVSACSDMGNLEMGKRVHEKVEEK----NMRCSLSLHNALLDMYVKCDCLVD 411
Query: 311 AYGVFRKMQRRNTVSWTSMITGFAKQGYAQEA 342
A +F +M ++ SWTSM+ G+AK G + A
Sbjct: 412 ARELFDRMATKDVYSWTSMVNGYAKCGDLESA 443
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 200/543 (36%), Positives = 311/543 (57%), Gaps = 69/543 (12%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS----GYLINAHK 73
L T + SL ++R QIH+ I NG S + L K L FY+ S + AHK
Sbjct: 22 LQTYGVSSLTKLR-------QIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMSYAHK 74
Query: 74 VFEKTENP-STAIWNQMIRGHARSETPEKSVYLYKQM-IDKETEPDEYTYSFLLSVCARC 131
VF K E P + IWN +IRG+A +V LY++M EPD +TY FLL +
Sbjct: 75 VFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKM 134
Query: 132 GLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWN 191
R GE +H V+ SG+ S ++++ +L++LY CG
Sbjct: 135 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLY----ANCG-------------------- 170
Query: 192 SLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL 251
D+ A+K+FD+MP +++V+W ++I+G A+NGK +AL+L+ EM +
Sbjct: 171 ----------DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMDLKGIKP 220
Query: 252 DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEA 311
D +V+ LSACA+IG L LGK H Y+ VG L S +N L+ +YA CG +EEA
Sbjct: 221 DGFTIVSLLSACAKIGALTLGKRFHVYM---IKVGLTRNLHS-SNVLLDLYARCGRVEEA 276
Query: 312 YGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSH 355
+F +M +N+VSWTS+I G A G +EA+ +TF+G+L ACSH
Sbjct: 277 KTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSH 336
Query: 356 GGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLG 415
G V EG ++F M++ + I+PRIEH+GCMVDL +RAG + +A+ + MPM+PN +
Sbjct: 337 CGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWR 396
Query: 416 SLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIK 475
+LL C +H +++LA ++A+ + +++P + Y+ L++N+YA+ +RW DV +R++M++
Sbjct: 397 TLLGACTVHGDSDLA-ELARMKILQLEPNHSGDYV-LLSNMYASEQRWSDVQKIRKQMLR 454
Query: 476 MGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLG 535
GVRK PG S V++ +H+F+ GD ++ Q +IY L E+T + EGY P IS +++
Sbjct: 455 DGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAKLKEMTDRLRLEGYVPQISNVYVD 514
Query: 536 IEE 538
+EE
Sbjct: 515 VEE 517
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 183/521 (35%), Positives = 303/521 (58%), Gaps = 31/521 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYL---INAHKVFEKTENPSTAIWNQMIRGHA 94
Q+H+ I N Q +Y++ LL F T ++ H +F + +P+ +++ +IR +A
Sbjct: 29 QLHAHIYRNNLHQSSYVITNLLRFITTLPHIPVHTYPHLLFSQVHSPNPFLYSALIRAYA 88
Query: 95 RSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVF 154
R+ S+ LY M++ P +T+S L S+ L G Q+H G+ ++++
Sbjct: 89 RNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSLLKNPSL---GSQLHLHAFLFGFVNDLY 145
Query: 155 IRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP 214
+ ++++Y+ G + CAR +FD+MP R VV+W L+ Y + GD+D A ++F +P
Sbjct: 146 VGNTIIHMYVKFGV---LDCARKVFDEMPHRDVVTWTELIVAYARSGDMDSACELFVGLP 202
Query: 215 HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKW 274
+++V+WT+M++G +QN ++AL F +MR A V D++ LV A+SACA++G W
Sbjct: 203 VKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLGVSGYADW 262
Query: 275 IHSYVEEN-FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF 333
I E + F G V + +ALI MY+ CG +EEAY VF+ M+ N S++SMI GF
Sbjct: 263 IREIAESSRFGSGSN---VFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIVGF 319
Query: 334 AKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
A G A+ A+ +TF+G+ +ACSH G V++G+Q F M + +G+ P
Sbjct: 320 AVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECYGVSPT 379
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
+HY CM DL RAG +++A LVQ MPM+PN V G+LL IH N ++A ++A + +
Sbjct: 380 ADHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGASHIHGNPDVA-EIASRSL 438
Query: 439 AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQI-NGVLHDFV 497
E++P+ YL L++ YA A +W DV+ VR+ M + +RK PG SWV+ NG++H+F
Sbjct: 439 FELEPDNLGNYL-LLSKTYALAAKWDDVSRVRKLMREKQLRKNPGCSWVEAKNGIIHEFF 497
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
AGD + + + I K L ++ + GY+P ++ + I++
Sbjct: 498 AGDVKHPEINEIKKALDDLLQRLKCTGYQPKLNSVPYDIDD 538
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 202/549 (36%), Positives = 323/549 (58%), Gaps = 40/549 (7%)
Query: 17 ALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY---LINAHK 73
A++T + S+L + L QIH+Q+I + +++L+AF SG L A
Sbjct: 3 AISTNPVVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASS 62
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMID--KETEPDEYTYSFLLSVCARC 131
VF + ++P++ I+ +I+G + + P +S+ LY +M+ + E++ +L C +
Sbjct: 63 VFSRIQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKL 122
Query: 132 GLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWN 191
F EG QVHG+VL + + F+ +++ +Y+ G + AR +FD MP R VVSWN
Sbjct: 123 LAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGE---IELARRVFDRMPNRDVVSWN 179
Query: 192 SLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL 251
S++ GY+K G+I+ A K+F+ M ++VV+WT+MIS QN +AL LF EM +
Sbjct: 180 SMIAGYLKAGEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGLRP 239
Query: 252 DQVALVAALSACAEIGDLKLGKWIHSYVEEN---FSVGREPVLVSLNNALIHMYASCGEI 308
D A+V+ LSA A++G ++ GKW+H+YV N S G + +ALI MY+ CG I
Sbjct: 240 DGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSG------FIGSALIDMYSKCGYI 293
Query: 309 EEAYGVFRKM-QRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSA 352
E AY VFR + RRN W SMI+G A G A+EAL +TFLG+LS
Sbjct: 294 ENAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLST 353
Query: 353 CSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDA 412
CSHGG V+EG+ +FE M++ + I PRI+HYGCM+DLF RAG +++A ++QNMP + +
Sbjct: 354 CSHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLL 413
Query: 413 VLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQK 472
++L H + E+ A + + E+ P+ ++ Y+ L++N+YA A RW DVA +R
Sbjct: 414 AWKAILSASMKHGHIEIGKSAALRAI-ELAPDDSSSYV-LLSNIYAKAGRWDDVAKIRLM 471
Query: 473 MIKMGVRKPPGQSWVQINGVLHDFVAG---DSTYKQASLIYKTLGEITMQAMQEGYKPDI 529
M + GV+K G S + +NG +H+F+ G DS+Y + + + E+ + +GY+PD+
Sbjct: 472 MRQRGVKKIAGCSSMLVNGKVHEFLLGKELDSSY--SGQVLAKIAEVVSRLKLQGYEPDL 529
Query: 530 SELFLGIEE 538
+++ L IE+
Sbjct: 530 TQVLLDIED 538
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 210/547 (38%), Positives = 304/547 (55%), Gaps = 66/547 (12%)
Query: 14 SSKALTTRQIFSLLQIRNTTKTLF-QIHSQIIINGFSQKN-----YILAKLLAFYVTSGY 67
S K+ ++ +LL ++K F QIH+ I +G N Y++ LL+F Y
Sbjct: 33 SPKSYILKKCIALLLSCASSKFKFRQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSY 92
Query: 68 LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSV 127
AH++F + +NP+ WN MIRG+A SE P ++ LY+QM EPD +TY FLL
Sbjct: 93 ---AHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKA 149
Query: 128 CARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARS 186
A+ REGE+VH + +G+ S VF++ L+++Y CG A LF+ M R+
Sbjct: 150 IAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMY----AACGHAESAHKLFELMAERN 205
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
+V+WNS++ GY G + A +F EM R V
Sbjct: 206 LVTWNSVINGYALNGRPNEALTLFREMGLRGVEP-------------------------- 239
Query: 247 ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCG 306
D +V+ LSACAE+G L LG+ H Y+ VG + L + NAL+ +YA CG
Sbjct: 240 -----DGFTMVSLLSACAELGALALGRRAHVYM---VKVGLDGNLHA-GNALLDLYAKCG 290
Query: 307 EIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLS 351
I +A+ VF +M+ ++ VSWTS+I G A G+ +EAL +TF+GVL
Sbjct: 291 SIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLY 350
Query: 352 ACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPND 411
ACSH G VDEG +F+ M + +GI P+IEHYGCMVDL RAGL+ +A +QNMPM+PN
Sbjct: 351 ACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNA 410
Query: 412 AVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQ 471
V +LL C IH + L +VA+ + +++P+ + Y+ L++N+YA+ +RW DV VR+
Sbjct: 411 VVWRTLLGACTIHGHLALG-EVARAQLLQLEPKHSGDYV-LLSNLYASEQRWSDVHKVRR 468
Query: 472 KMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISE 531
M++ GV+K PG S V++ LH+FV GD ++ Q IY L EIT EGY P IS
Sbjct: 469 TMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISN 528
Query: 532 LFLGIEE 538
+ IEE
Sbjct: 529 VLADIEE 535
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 187/545 (34%), Positives = 315/545 (57%), Gaps = 28/545 (5%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV--TSGYLIN 70
+S + + S+++ T + L QIH+Q++ING ++ + +A L
Sbjct: 2 SSLRCIVKHPTISMVEPCTTLRELKQIHTQLLINGLLNDPQLVGQFVASIALNNPNNLHY 61
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKE--TEPDEYTYSFLLSVC 128
+++V + ++NP+ +N MIR H++S TP +S + Y +++ PD YT++FL+
Sbjct: 62 SNQVLDNSQNPTLFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTS 121
Query: 129 ARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVV 188
A+ G VHG + G+ + +++ L+ +Y GG + +F + +V
Sbjct: 122 AQLLAHGTGSSVHGAAVKYGFEYDPHVQSGLIYMYAELGG---LDACHRVFSSICEPDLV 178
Query: 189 SWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR 248
+++ K GD+ A K+FD+M H++ ++W MISG Q G+SR+ALSLFN M+R
Sbjct: 179 CQTAMVSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREG 238
Query: 249 VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEI 308
V +++V++V+ LSAC+ +G L G+W H+Y+E N + + ++L ALI MYA CG +
Sbjct: 239 VKVNEVSMVSVLSACSHLGALDQGRWAHAYIERN----KLRMTLTLGTALIDMYAKCGNM 294
Query: 309 EEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSAC 353
+A VF M+ +N +W+S I G A G ++ L +TF+ VL C
Sbjct: 295 NKAMEVFWGMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGC 354
Query: 354 SHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAV 413
S G V+EGR+ FE M++ +GI+PR+EHYGCMVDL+ RAG +DEA + + +MP++P+
Sbjct: 355 SVVGLVEEGRKHFESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGA 414
Query: 414 LGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKM 473
G+LL C+I+ N E+ ++K+V E++ + Y+ L++N+YA +K W V+ VRQ M
Sbjct: 415 WGALLNACKIYRNMEMGELASRKIV-ELEAKNHGAYV-LLSNIYADSKDWDRVSNVRQTM 472
Query: 474 IKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELF 533
GVRK PG S +++ G +H+F GD ++ + + I LGEI+ + GY + + +F
Sbjct: 473 NVKGVRKQPGCSVIEVGGEVHEFFVGDKSHPRYAEIQVMLGEISRRLKLSGYVANTNPVF 532
Query: 534 LGIEE 538
IEE
Sbjct: 533 FDIEE 537
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 192/530 (36%), Positives = 307/530 (57%), Gaps = 62/530 (11%)
Query: 31 NTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS----GYLINAHKVFEKTENP-STAI 85
++ L QIH+ I +G S + L K L FY+ S + AHKVF K E P + I
Sbjct: 28 SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87
Query: 86 WNQMIRGHARSETPEKSVYLYKQM-IDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRV 144
WN +IRG+A + LY++M + EPD +TY FL+ R GE +H V
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 145 LASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDID 204
+ SG+ S ++++ +L++LY CG D+
Sbjct: 148 IRSGFGSLIYVQNSLLHLY----ANCG------------------------------DVA 173
Query: 205 GAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACA 264
A+K+FD+MP +++V+W ++I+G A+NGK +AL+L+ EM + D +V+ LSACA
Sbjct: 174 SAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACA 233
Query: 265 EIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTV 324
+IG L LGK +H Y+ VG L S +N L+ +YA CG +EEA +F +M +N+V
Sbjct: 234 KIGALTLGKRVHVYM---IKVGLTRNLHS-SNVLLDLYARCGRVEEAKTLFDEMVDKNSV 289
Query: 325 SWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFEC 368
SWTS+I G A G+ +EA+ +TF+G+L ACSH G V EG ++F
Sbjct: 290 SWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRR 349
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAE 428
M + + I+PRIEH+GCMVDL +RAG + +A+ +++MPM+PN + +LL C +H +++
Sbjct: 350 MREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD 409
Query: 429 LASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
LA + A+ + +++P + Y+ L++N+YA+ +RW DV +R++M++ GV+K PG S V+
Sbjct: 410 LA-EFARIQILQLEPNHSGDYV-LLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVE 467
Query: 489 INGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ +H+F+ GD ++ Q+ IY L E+T + EGY P IS +++ +EE
Sbjct: 468 VGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEE 517
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 195/551 (35%), Positives = 315/551 (57%), Gaps = 38/551 (6%)
Query: 9 ANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYL 68
+NP S K+L +QI SLLQ + IH+Q+I NG SQ +++ +LL +
Sbjct: 39 SNP-KSLKSLDQKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAI 97
Query: 69 INAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVC 128
A ++F+ T NP+ ++ +I G S ++ LY +M+ PD Y + +L C
Sbjct: 98 DYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKAC 157
Query: 129 ARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSV 187
REG +VH R L G SN +R +M LY G+CG +G AR +F++MP V
Sbjct: 158 GSQLALREGREVHSRALKLGLSSNRLVRLRIMELY----GKCGELGDARRVFEEMP-EDV 212
Query: 188 VSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRA 247
V+ ++ Y +G ++ A +F + ++ V WT MI G +N + +AL F M+
Sbjct: 213 VASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGE 272
Query: 248 RVGLDQVALVAALSACAEIGDLKLGKWIHSY-----VEENFSVGREPVLVSLNNALIHMY 302
V ++ +V LSAC+++G L++G+W+HSY +E N VG NALI+MY
Sbjct: 273 NVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVG---------NALINMY 323
Query: 303 ASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFL 347
+ CG I+EA VF +M+ R+ +++ +MI+G + G +++A+ +TF+
Sbjct: 324 SRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFV 383
Query: 348 GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM 407
GVL+ACSHGG VD G + F M +++G++P+IEHYGCMVDL R G ++EA+ L++ M M
Sbjct: 384 GVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKM 443
Query: 408 KPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVA 467
P+ +LG+LL C++H N EL QVA+ V E + +G L+++VYA++ +W++ A
Sbjct: 444 TPDHIMLGTLLSACKMHKNLELGEQVAK--VLEDRGQADSGTYVLLSHVYASSGKWKEAA 501
Query: 468 AVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
VR KM + G++K PG S +++N +H+F+ GD + + IY+ L E+ EGY P
Sbjct: 502 QVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYEKLEELNRLLRLEGYHP 561
Query: 528 DISELFLGIEE 538
+ + IE+
Sbjct: 562 EKEVVLQDIED 572
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 203/551 (36%), Positives = 302/551 (54%), Gaps = 30/551 (5%)
Query: 8 PANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY 67
P + L+ +F L N K Q+H+ +++ G + +K++AFY +SG
Sbjct: 61 PLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGD 120
Query: 68 LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSV 127
+ ++ VF PS+ ++N MIR +AR E++V Y M D +T+ F+L
Sbjct: 121 IDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKS 180
Query: 128 CARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARS 186
G+ VHG +L G ++++ T+L+ LY G+CG + A +FD+M R
Sbjct: 181 SVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILY----GKCGEINDAGKVFDNMTIRD 236
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
V SWN+LL GY K G ID A IF+ MP RN+VSWTTMISG +Q+G ++QALSLF+EM +
Sbjct: 237 VSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVK 296
Query: 247 ARVGL--DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYAS 304
G+ + V +++ L ACA++ L+ G+ IH VL+ AL MYA
Sbjct: 297 EDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLI----ALTAMYAK 352
Query: 305 CGEIEEAYGVFRKMQR--RNTVSWTSMITGFAKQGYAQEAL---------------LTFL 347
CG + +A F K+ R +N ++W +MIT +A G+ +A+ +TF
Sbjct: 353 CGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFT 412
Query: 348 GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM 407
G+LS CSH G VD G ++F M+ + I PR+EHY C+ DL RAG + EA LV MPM
Sbjct: 413 GLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPM 472
Query: 408 KPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVA 467
++ GSLL CR H N E+A A+KL ++PE Y+ L++N+YA A RWQ+V
Sbjct: 473 PAGPSIWGSLLAACRKHRNLEMAETAARKLFV-LEPENTGNYV-LLSNMYAEAGRWQEVD 530
Query: 468 AVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
+R + G +K PG SW++ING H F+ GD+++ Q IY L + + GY P
Sbjct: 531 KLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFP 590
Query: 528 DISELFLGIEE 538
D S + I E
Sbjct: 591 DTSYVLHDISE 601
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 2/138 (1%)
Query: 2 LVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAF 61
L +E++ + +T + +T + QIH G + +L L A
Sbjct: 290 LFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAM 349
Query: 62 YVTSGYLINAHKVFEK-TENPSTAI-WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEY 119
Y G L++A F+K N I WN MI +A ++V +++MI +PD+
Sbjct: 350 YAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDI 409
Query: 120 TYSFLLSVCARCGLFREG 137
T++ LLS C+ GL G
Sbjct: 410 TFTGLLSGCSHSGLVDVG 427
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 197/542 (36%), Positives = 314/542 (57%), Gaps = 66/542 (12%)
Query: 22 QIFSLLQ---IRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS----GYLINAHKV 74
+ +LLQ + + TK L QIH+ I +G S + L K L FY+ S + AHKV
Sbjct: 17 KCINLLQTYGVSSITK-LRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKV 75
Query: 75 FEKTENP-STAIWNQMIRGHARSETPEKSVYLYKQM-IDKETEPDEYTYSFLLSVCARCG 132
F K E P + IWN +IRG+A + LY++M + EPD +TY FL+
Sbjct: 76 FSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMA 135
Query: 133 LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNS 192
R GE +H V+ SG+ S ++++ +L++LY C
Sbjct: 136 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLY--------ANC------------------ 169
Query: 193 LLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLD 252
GD+ A+K+FD+MP +++V+W ++I+G A+NGK +AL+L+ EM + D
Sbjct: 170 --------GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPD 221
Query: 253 QVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAY 312
+V+ LSACA+IG L LGK +H Y+ VG L S +N L+ +YA CG +EEA
Sbjct: 222 GFTIVSLLSACAKIGALTLGKRVHVYM---IKVGLTRNLHS-SNVLLDLYARCGRVEEAK 277
Query: 313 GVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHG 356
+F +M +N+VSWTS+I G A G+ +EA+ +TF+G+L ACSH
Sbjct: 278 TLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHC 337
Query: 357 GFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGS 416
G V EG ++F M + + I+PRIEH+GCMVDL +RAG + +A+ +++MPM+PN + +
Sbjct: 338 GMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRT 397
Query: 417 LLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKM 476
LL C +H +++LA + A+ + +++P + Y+ L++N+YA+ +RW DV +R++M++
Sbjct: 398 LLGACTVHGDSDLA-EFARIQILQLEPNHSGDYV-LLSNMYASEQRWSDVQKIRKQMLRD 455
Query: 477 GVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGI 536
GV+K PG S V++ +H+F+ GD ++ Q+ IY L E+T + EGY P IS +++ +
Sbjct: 456 GVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDV 515
Query: 537 EE 538
EE
Sbjct: 516 EE 517
>gi|449452775|ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
gi|449493602|ref|XP_004159370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 548
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 196/545 (35%), Positives = 314/545 (57%), Gaps = 31/545 (5%)
Query: 11 PATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLIN 70
PA + +L Q SLL L+QIH ++ Q N L++ + + G
Sbjct: 18 PAIFTSSL---QFTSLLSNCRHHLHLYQIHGFMLHRALDQDNLFLSQFIDACTSLGLSSY 74
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
A +F +P ++N I+ +++ +P +++LY ++ PD Y+ +L +
Sbjct: 75 AFSIFSNKTHPDLRLYNTAIKALSKTSSPINAIWLYTRIRIDGLRPDSYSIPSVLKAVVK 134
Query: 131 CGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVS 189
G Q+H + ++S +V + T+L+ +Y CG V AR LFD + + V
Sbjct: 135 LSAVEVGRQIHTQTVSSALDMDVNVATSLIQMY----SSCGFVSDARKLFDFVGFKDVAL 190
Query: 190 WNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARV 249
WN+++ GYVK G++ A K+F+EMP RNV+SWTT+I+G AQ + +A+ LF +M+ V
Sbjct: 191 WNAMVAGYVKVGELKSARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIELFRKMQLEEV 250
Query: 250 GLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIE 309
D++A++A LSACA++G L+LG+WIH+Y+E++ + R +VSL NALI MYA G I
Sbjct: 251 EPDEIAMLAVLSACADLGALELGEWIHNYIEKH-GLCR---IVSLYNALIDMYAKSGNIR 306
Query: 310 EAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACS 354
A VF M++++ ++W+++I A G EA+ +TF+ +LSACS
Sbjct: 307 RALEVFENMKQKSVITWSTVIAALALHGLGGEAIDMFLRMEKAKVRPNEVTFVAILSACS 366
Query: 355 HGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL 414
H G VD GR +F+ M + I+P+IEHYGCM+DL +RAG + EA L+ +MP + N +
Sbjct: 367 HVGMVDVGRYYFDQMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFEANAMIW 426
Query: 415 GSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMI 474
GSLL H +AELA Q+A K +A+++P + Y+ L++N YAA +W + VR+ M
Sbjct: 427 GSLLAASNTHRDAELA-QLALKHLAKLEPGNSGNYV-LLSNTYAALGKWNESGTVRKLMR 484
Query: 475 KMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEG-YKPDISELF 533
GV+K PG S ++IN ++++F+AGD + Q IY L +I +Q G Y+ + S+ F
Sbjct: 485 NAGVKKAPGGSVIEINNIVYEFLAGDMSDSQVHEIYHVLCKIILQLKMAGSYQEEWSK-F 543
Query: 534 LGIEE 538
L E
Sbjct: 544 LDYHE 548
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 197/523 (37%), Positives = 285/523 (54%), Gaps = 74/523 (14%)
Query: 22 QIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVT--SGYLINAHKVFEKTE 79
Q LLQ + + L QIH Q++ G +KLLAF + SG L A VF++
Sbjct: 20 QTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIF 79
Query: 80 NPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
P+T +WN MIRG++ S+ PE+++ LY M+ + YT+ FLL C+ E +Q
Sbjct: 80 RPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQ 139
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVK 199
+H ++ G+ S ++ + NSLL Y K
Sbjct: 140 IHAHIIKMGFGSEIY----------------------------------TTNSLLNVYSK 165
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
GDI A +FD++ R+ +AL+LF+ M+ A + LD VALV+
Sbjct: 166 SGDIKSARLLFDQVDQRDT-----------------EALNLFHRMQTAGIKLDNVALVST 208
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
L ACA++G L GKWIH+Y++++ + +P+L LI MYA CG++EEA VFRKM+
Sbjct: 209 LQACADLGVLDQGKWIHAYIKKH-EIEIDPIL---GCVLIDMYAKCGDLEEAIEVFRKME 264
Query: 320 RRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQ 364
+ WT+MI+G+A G +EAL +TF G+L+ACSH G V E +
Sbjct: 265 EKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKL 324
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
FE M + G KP IEHYGCMVDL RAGL+ EA L++NMP+KPN A+ G+LL C IH
Sbjct: 325 LFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIH 384
Query: 425 NNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQ 484
N EL Q+ K++ ++DP Y+ L A+++AAA W A VR++M + GV K PG
Sbjct: 385 GNLELGKQIG-KILIQVDPGHGGRYIHL-ASIHAAAGEWNQAARVRRQMKEQGVSKLPGC 442
Query: 485 SWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
S + +NG H+F+AGD ++ Q I L +I + +EGYKP
Sbjct: 443 SVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKP 485
>gi|449434296|ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449479547|ref|XP_004155632.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 638
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 190/521 (36%), Positives = 294/521 (56%), Gaps = 29/521 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLIN---AHKVFEKTENPSTAIWNQMIRGHA 94
Q H++I++ G + I + LLAF S + A ++ +P+ N MIR
Sbjct: 49 QAHARILVLGLANDGRITSHLLAFLAISSSSLPSDYALSIYNSISHPTVFATNNMIRCFV 108
Query: 95 RSETPEKSVYLYKQMIDK-ETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNV 153
+ + P S+ LY M P+++T +F+L C+ REG QV V+ G+ +V
Sbjct: 109 KGDLPRHSISLYSHMCRSFVAAPNKHTLTFVLQACSNAFAIREGAQVQTHVIKLGFVKDV 168
Query: 154 FIRTNLMNLYLMSGGECGVGCARLLFDDMPA-RSVVSWNSLLKGYVKRGDIDGAWKIFDE 212
F+R L++LY C V A+ +FD++P+ R VVSWNS++ G+V+ G I A K+F E
Sbjct: 169 FVRNALIHLYCTC---CRVESAKQVFDEVPSSRDVVSWNSMIVGFVRLGQISVAQKLFVE 225
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
MP ++V+SW T+ISGC QNG+ +AL F E+ ++ ++ LV+ L+A A++G L+ G
Sbjct: 226 MPEKDVISWGTIISGCVQNGELEKALDYFKELGEQKLRPNEAILVSLLAAAAQLGTLEYG 285
Query: 273 KWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
K IHS R P+ SL AL+ MYA CG I+E+ +F +M ++ SW MI G
Sbjct: 286 KRIHSIANSL----RFPMTASLGTALVDMYAKCGCIDESRFLFDRMPEKDKWSWNVMICG 341
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
A G QEAL +TF+GVL+ACS G V EG+ FF+ M +GI+P
Sbjct: 342 LATHGLGQEALALFEKFLTQGFHPVNVTFIGVLTACSRAGLVSEGKHFFKLMTDTYGIEP 401
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
+EHYGCMVDL SRAG + +A ++ MP P+ + S+L C++H EL ++ KL
Sbjct: 402 EMEHYGCMVDLLSRAGFVYDAVEMINRMPAPPDPVLWASVLGSCQVHGFIELGEEIGNKL 461
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
+ ++DP Y+ L A ++A ++W+DV+ VR+ M + K G S ++ G +H FV
Sbjct: 462 I-QMDPTHNGHYVQL-ARIFARLRKWEDVSKVRRLMAERNSNKIAGWSLIEAEGRVHRFV 519
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
AGD +++ + IYK L + ++ GY ++S + IEE
Sbjct: 520 AGDKEHERTTEIYKMLEIMGVRIAAAGYSANVSSVLHDIEE 560
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 128/319 (40%), Gaps = 84/319 (26%)
Query: 138 EQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGY 197
+Q H R+L G ++ I ++L+ +S +P+
Sbjct: 48 KQAHARILVLGLANDGRITSHLLAFLAISSS------------SLPS------------- 82
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL-DQVAL 256
D A I++ + H V + MI + R ++SL++ M R+ V ++ L
Sbjct: 83 ------DYALSIYNSISHPTVFATNNMIRCFVKGDLPRHSISLYSHMCRSFVAAPNKHTL 136
Query: 257 VAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFR 316
L AC+ ++ G + ++V + V V + NALIH+Y +C +E A VF
Sbjct: 137 TFVLQACSNAFAIREGAQVQTHVIKLGFVKD----VFVRNALIHLYCTCCRVESAKQVFD 192
Query: 317 KM-QRRNTVSWTSMITGFAKQG-----------YAQEALLTFLGVLSACSHGGFVDEGRQ 364
++ R+ VSW SMI GF + G ++ ++++ ++S C G +++
Sbjct: 193 EVPSSRDVVSWNSMIVGFVRLGQISVAQKLFVEMPEKDVISWGTIISGCVQNGELEKALD 252
Query: 365 FFECMNQNWGIKPR---------------IEHYG--------------------CMVDLF 389
+F+ + + ++P YG +VD++
Sbjct: 253 YFKELGEQ-KLRPNEAILVSLLAAAAQLGTLEYGKRIHSIANSLRFPMTASLGTALVDMY 311
Query: 390 SRAGLMDEAFSLVQNMPMK 408
++ G +DE+ L MP K
Sbjct: 312 AKCGCIDESRFLFDRMPEK 330
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 188/519 (36%), Positives = 300/519 (57%), Gaps = 28/519 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH ++ G + ++ L+ Y + A VF+K W+ MIR +R++
Sbjct: 145 EIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNK 204
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+ ++ L ++M + P E ++++ A R G+ +H V+ + ++ + T
Sbjct: 205 EFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPT 264
Query: 158 N--LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP 214
L+++Y +CG +G AR LF+ + ++VVSW +++ G ++ ++ A +FD
Sbjct: 265 TTALLDMY----AKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQ 320
Query: 215 HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKW 274
+R+V+ WT M+S AQ QA +LF++MR + V +V +V+ LS CA G L LGKW
Sbjct: 321 NRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKW 380
Query: 275 IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
+HSY+++ R V LN AL+ MYA CG+I A +F + R+ W ++ITGFA
Sbjct: 381 VHSYIDKE----RVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFA 436
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
GY +EAL +TF+G+L ACSH G V EG++ FE M +G+ P+I
Sbjct: 437 MHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQI 496
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
EHYGCMVDL RAGL+DEA ++++MP+KPN V G+L+ CR+H N +L A +L+
Sbjct: 497 EHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLL- 555
Query: 440 EIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG 499
EI+PE GY L++N+YAAA RW D A VR+ M +G++K PG S +++NG +H+F+ G
Sbjct: 556 EIEPEN-CGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMG 614
Query: 500 DSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
D ++ Q I + L E+ + + GY PD S + L I+E
Sbjct: 615 DQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDE 653
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 155/334 (46%), Gaps = 51/334 (15%)
Query: 75 FEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLF 134
F +PS A WN +I + + P ++ +Y Q+ + E D + +L C +
Sbjct: 82 FPSGLSPS-AQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWT 140
Query: 135 REGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSL 193
+ G+++HG VL G +VF+ LM +Y GEC V ARL+FD M R VVSW+++
Sbjct: 141 QLGKEIHGFVLKKGLDRDVFVGNALMLMY----GECACVEYARLVFDKMMERDVVSWSTM 196
Query: 194 LKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQ 253
++ + + D AL L EM +V +
Sbjct: 197 IRSLSRNKEFD-------------------------------MALELIREMNFMQVRPSE 225
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
VA+V+ ++ A+ ++++GK +H+YV N + E + V AL+ MYA CG + A
Sbjct: 226 VAMVSMVNLFADTANMRMGKAMHAYVIRNSN--NEHMGVPTTTALLDMYAKCGHLGLARQ 283
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEA-----------LLTFLGVLSACSHGGFVDEG 362
+F + ++ VSWT+MI G + +EA ++ + +LSA + +D+
Sbjct: 284 LFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQA 343
Query: 363 RQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMD 396
F+ M + G++P ++ L + AG +D
Sbjct: 344 FNLFDQMRTS-GVRPTKVTIVSLLSLCAVAGALD 376
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 179/498 (35%), Positives = 297/498 (59%), Gaps = 28/498 (5%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
F+I Q++ GF + Y+ ++ V+ G AHKVF++ WN +I G+ R
Sbjct: 174 FEILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSLINGYVRR 233
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
P +++ +Y+QMI + +PDE T ++S CA+ + G ++H + SG + +
Sbjct: 234 RQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLV 293
Query: 157 TNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
LM++Y+ +CG + ++LFD+M ++VVSW +++ GY K G +D A K+F +MP
Sbjct: 294 NALMDMYV----KCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPE 349
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
+NVV+W MI C Q S +AL LF EM+ + + D+V ++ LSAC+++G L G W
Sbjct: 350 KNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWT 409
Query: 276 HSYVEE-NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
H+Y+++ N S+ V+L ALI MYA CG + +A VF +M RRN+++WT++I G A
Sbjct: 410 HNYIKKHNLSLD-----VALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGGLA 464
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
G +A+ +TFLGVL+AC HGG V+EGR++F+ M + + P+
Sbjct: 465 LYGNVNDAIFYFSKMIDSGLMPDEITFLGVLTACCHGGLVEEGRKYFDQMKSRFNLSPQP 524
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
+HY CMV+L RAGL++EA L++ MPM+ + V G+L C IH N + + A KL+
Sbjct: 525 KHYSCMVNLLGRAGLLEEAEELIKTMPMEADAMVWGALFFACGIHRNLLIGERAASKLL- 583
Query: 440 EIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG 499
++DP + Y+ L+AN+Y A +W++ +R+ M++ GV K PG S +++NG++++F+
Sbjct: 584 DLDPHDSGIYV-LLANMYREAGKWEEAQNIRKMMMERGVEKTPGSSSIEVNGIINEFIVR 642
Query: 500 DSTYKQASLIYKTLGEIT 517
D ++ Q+ IY+ I
Sbjct: 643 DKSHPQSEQIYECFNLIN 660
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/467 (28%), Positives = 220/467 (47%), Gaps = 97/467 (20%)
Query: 8 PANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS-- 65
P + T+ + + + SLL+ + L QI +Q+I+ G + ++L++F S
Sbjct: 41 PTSWNTTHTYVLSNPLLSLLENCKSFSQLKQIQAQMILTGLILDGFASSRLISFCAISES 100
Query: 66 ---GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKE-TEPDEYTY 121
Y I K+ +NP+ WN +IRG SE P+K + LYK+M+ + PD YTY
Sbjct: 101 RNLDYCI---KILNNLQNPNVFSWNAVIRGCVESENPQKGLVLYKRMLTRAGCRPDNYTY 157
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDD 181
SFL VCA L G ++ G+VL G+ ++++ ++++ L+S GE G+ A +FD+
Sbjct: 158 SFLFKVCANLVLSYMGFEILGQVLKMGFDKDMYLYNGIIHM-LVSVGESGL--AHKVFDE 214
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
R +VSWNSL+ GYV+R + R+A+ ++
Sbjct: 215 GCVRDLVSWNSLINGYVRR-------------------------------RQPREAMGIY 243
Query: 242 NEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHM 301
+M V D+V ++ +SACA++ LKLG+ IH Y+EE+ + +SL NAL+ M
Sbjct: 244 QQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIEES----GLNLKISLVNALMDM 299
Query: 302 YASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQ--------------------- 340
Y CG++E +F M+++ VSWT+MI G+AK G
Sbjct: 300 YVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMI 359
Query: 341 ----------EAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGI 375
EAL +T L LSACS G +D G + ++ +
Sbjct: 360 GSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKKH-NL 418
Query: 376 KPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPN---DAVLGSLLL 419
+ ++D++++ G M +A + MP + + A++G L L
Sbjct: 419 SLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGGLAL 465
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 197/540 (36%), Positives = 314/540 (58%), Gaps = 39/540 (7%)
Query: 32 TTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY--LINAHKVFEKTENPSTAIWNQM 89
+ + L Q+H+ ++ G + N I ++L TS + + A VF++ + WN +
Sbjct: 27 SMRELKQVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPERNCFAWNTV 86
Query: 90 IRGHARSETPE-KSVYLYKQMIDKET-EPDEYTYSFLLSVCARCGLFREGEQVHGRVLAS 147
IR A ++ ++ ++ QM+ + T EP+++T+ +L CA EG+QVHG +L
Sbjct: 87 IRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEGKQVHGLLLKF 146
Query: 148 GYCSNVFIRTNLMNLYLMSGGEC-----------GVGCARLLFDDMPAR--SVVSWNSLL 194
G + F+ TNL+ +Y+M G GV R L D R +VV N ++
Sbjct: 147 GLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREFNVVLCNVMV 206
Query: 195 KGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR-ARVGLDQ 253
GY + G++ A ++FD M R+VVSW MISG AQNG ++A+ +F+ M + V ++
Sbjct: 207 DGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMGDVLPNR 266
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
V LV+ L A + +G L+LGKW+H Y E+N + + VL S AL+ MYA CG IE+A
Sbjct: 267 VTLVSVLPAISRLGVLELGKWVHLYAEKN-KIRIDDVLGS---ALVDMYAKCGSIEKAIQ 322
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGF 358
VF ++ + N ++W ++I G A G A + +T++ +LSACSH G
Sbjct: 323 VFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAILSACSHAGL 382
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLL 418
VDEGR FF M + G+KP+IEHYGCMVDL RAG ++EA L+ NMPMKP+D + +LL
Sbjct: 383 VDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDDVIWKALL 442
Query: 419 LGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
++H N ++ + A+ L+ ++ P + Y+AL +N+YA++ W VAAVR M M +
Sbjct: 443 GASKMHKNIKIGMRAAEVLM-QMAPHDSGAYVAL-SNMYASSGNWDGVAAVRLMMKDMDI 500
Query: 479 RKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
RK PG SW++I+GV+H+F+ D ++ +A I+ L EI+ + EG+ PD +++ L ++E
Sbjct: 501 RKDPGCSWIEIDGVIHEFLVEDDSHSRAKDIHSMLEEISNKLSLEGHMPDTTQVLLKMDE 560
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 187/475 (39%), Positives = 282/475 (59%), Gaps = 24/475 (5%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEK 77
L R LL + L Q+H+ ++ + L+++ + + A +F+
Sbjct: 13 LHHRPSTHLLHNFTSPFELKQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQL 72
Query: 78 TENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+ WN +R A ++P ++ L+ ++ + + PD YT SF+L C+R R G
Sbjct: 73 LDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNG 132
Query: 138 EQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGY 197
+ VHG V G SN+F++ +++LY + G +G AR +FD MP R V++WN ++
Sbjct: 133 KIVHGYVEKLGLQSNMFLQNMIVHLYALCGE---IGVARKVFDKMPQRDVITWNIMIARL 189
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
VK GD +GA+K+F EMP RNV SWT+MI G AQ GKS++A+ LF EM A + ++V +V
Sbjct: 190 VKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVV 249
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
A L ACA++G+L LG+ IH + + G E + + N LI MY CG +E+A +F
Sbjct: 250 AVLVACADMGNLVLGRRIHDFSNRS---GYEKN-IRVCNTLIDMYVKCGCLEDACRIFDN 305
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEG 362
M+ R VSW++MI G A G A++AL +TF+G+L ACSH G V++G
Sbjct: 306 MEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKG 365
Query: 363 RQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCR 422
R++F M +++GI PRIEHYGCMVDLFSRAGL+ EA + NMP+ PN V G+LL GC+
Sbjct: 366 RKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCK 425
Query: 423 IHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMG 477
+H N +LA + + L +++DP GY +++N+YA A RW+DVA VR+ M G
Sbjct: 426 VHKNVKLAEEATRHL-SKLDPLN-DGYYVVLSNIYAEAGRWEDVARVRKLMRDRG 478
>gi|296082968|emb|CBI22269.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 185/520 (35%), Positives = 295/520 (56%), Gaps = 47/520 (9%)
Query: 10 NPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLI 69
NP SK Q S L ++ + QIH+Q++ +++++ KL+A + +
Sbjct: 7 NPTWVSKRRLLEQKISDLHRCSSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMT 66
Query: 70 NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
A VF + ++P ++N +IR H R+ P + ++ +M D D +TY FLL C+
Sbjct: 67 LAVNVFNQIQDPDVLLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACS 126
Query: 130 RCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVS 189
R E +H +V G+C ++F+ +L++ Y G +G AR LFD+MP R VS
Sbjct: 127 GKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKLGE---LGEARRLFDEMPERDTVS 183
Query: 190 WNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARV 249
WN++L GYVK G+++ A+++F++MP RNVVSW+TM +G +
Sbjct: 184 WNTILDGYVKAGEMNAAFELFEKMPARNVVSWSTMEAG---------------------L 222
Query: 250 GLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIE 309
D +++ LSACA G L LGK +H+ +E PV +NALI MYA CG +E
Sbjct: 223 KFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPV----SNALIDMYAKCGSLE 278
Query: 310 EAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACS 354
A +F M R++ VSW ++I G A G+ ++AL +TF+GVL AC+
Sbjct: 279 NALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACT 338
Query: 355 HGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL 414
H GFVDEG +F M +++G+ P +EHYGCMVDL R G + EAF LV +MP++PN +
Sbjct: 339 HAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIW 398
Query: 415 GSLLLGCRIHNNAELASQVAQKLV-AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKM 473
G+LL CR+H+ LA +V +LV +E+ +G L++++N+YAAA W + A +R +M
Sbjct: 399 GTLLGACRMHSATGLAEEVFDRLVKSELSD---SGNLSMLSNIYAAAGDWDNFANIRLRM 455
Query: 474 IKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTL 513
++KP G S ++++ +H+F D ++ ++ IYKT+
Sbjct: 456 KSTSIQKPSGGSSIEVDDEVHEFTVFDRSHPKSDRIYKTI 495
>gi|225465641|ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Vitis vinifera]
Length = 539
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 190/523 (36%), Positives = 298/523 (56%), Gaps = 31/523 (5%)
Query: 19 TTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFE 76
T + + +LL+ + QI + I +G SQ + ++LL+F S G + +++++F
Sbjct: 11 TNQTLIALLENCRSMSEFKQIQAFFITSGLSQHHPFASRLLSFSAISSWGDIDHSYRIFL 70
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
+ +P+ + WN +IRG ++ + P SV ++ +M+ PD TY F+ AR R
Sbjct: 71 QIPSPTISNWNSIIRGFSKGKNPNPSVSVFVKMLRFGVCPDHLTYPFIAKAVARLSELRL 130
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLK 195
VH R+ G + FI +L+++Y G CG +G AR +FD+M R+ VSWN++L
Sbjct: 131 ALAVHCRIAKEGLWFDRFIANSLIHMY----GSCGDIGSARKVFDEMLIRNSVSWNAMLD 186
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVA 255
GY K GD+D A ++F+ MP R+VVSW++MI GC + G+ AL++F MR ++V
Sbjct: 187 GYAKCGDLDSARQVFESMPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRVVGPKANEVT 246
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
+V+ L ACA +G L+ G+ +H Y+ +N + L +L+ MYA CG IEEA VF
Sbjct: 247 MVSVLCACAHLGALEQGRTMHQYMVDN----TMRFTLVLRTSLMDMYAKCGAIEEAIAVF 302
Query: 316 R--KMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGF 358
R M + + + W ++I G A G E+L +T+L + SAC+HGG
Sbjct: 303 RGVPMDQTDVLMWNTIIGGLATHGLVHESLELFKEMQVLGIVPDEITYLCLFSACAHGGL 362
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLL 418
V E FF+ + + G+ P+ EHY CMVD+ SRAG + EA+ + MPM+P ++LG+LL
Sbjct: 363 VHEAWHFFKSLGKQ-GMVPKSEHYACMVDVLSRAGQLAEAYDFIAQMPMEPTASMLGALL 421
Query: 419 LGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
GC H +LA +V +KL+ E++P+ Y+ L +NVYA K W + +R+ M + GV
Sbjct: 422 NGCMNHRRFDLAERVGRKLI-ELEPDHDGRYIGL-SNVYAGVKLWDNARMMREAMERRGV 479
Query: 479 RKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAM 521
+K PG S+V++ G LH F+A D T+ IY L I Q M
Sbjct: 480 KKSPGFSFVEVLGTLHRFIAHDKTHNDLEKIYMMLNTIVRQMM 522
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 184/534 (34%), Positives = 314/534 (58%), Gaps = 28/534 (5%)
Query: 24 FSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSG--YLINAHKVFEKTENP 81
+LL T K + QIH+++ ++G + ++++ + S YL A+++ +++E P
Sbjct: 10 IALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKP 69
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMID--KETEPDEYTYSFLLSVCARCGLFREGEQ 139
+ N MIR H +S PEKS Y++++ + +PD YT +FL+ C + G Q
Sbjct: 70 TLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQ 129
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVK 199
VHG + G+ ++ ++T L++LY G C C ++ F+ +P V +++ +
Sbjct: 130 VHGMTIRRGFDNDPHVQTGLISLYAELG--CLDSCHKV-FNSIPCPDFVCRTAMVTACAR 186
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
GD+ A K+F+ MP R+ ++W MISG AQ G+SR+AL++F+ M+ V ++ VA+++
Sbjct: 187 CGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISV 246
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
LSAC ++G L G+W HSY+E N + + V L L+ +YA CG++E+A VF M+
Sbjct: 247 LSACTQLGALDQGRWAHSYIERN----KIKITVRLATTLVDLYAKCGDMEKAMEVFWGME 302
Query: 320 RRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQ 364
+N +W+S + G A G+ ++ L +TF+ VL CS GFVDEG++
Sbjct: 303 EKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQR 362
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
F+ M +GI+P++EHYGC+VDL++RAG +++A S++Q MPMKP+ AV SLL R++
Sbjct: 363 HFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMY 422
Query: 425 NNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQ 484
N EL ++K++ E++ Y+ L++N+YA + W +V+ VRQ M GVRK PG
Sbjct: 423 KNLELGVLASKKML-ELETANHGAYV-LLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGC 480
Query: 485 SWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
S +++NG +H+F GD ++ + + I +I+ + GYK D + + I+E
Sbjct: 481 SVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDE 534
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 188/528 (35%), Positives = 296/528 (56%), Gaps = 29/528 (5%)
Query: 26 LLQIRNTTKTL---FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPS 82
LL+ + K+L +IH GF ++ L+ Y G + A +F+K +
Sbjct: 128 LLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRD 187
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHG 142
W+ MI G+ +S ++ L+++M + EPDE S +LS C R G G+ +H
Sbjct: 188 VVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHD 247
Query: 143 RVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRG 201
++ + + +++ L+ +Y CG + A LF+ M +++V+ +++ GY K G
Sbjct: 248 FIMENNIVVDPHLQSALVTMY----ASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLG 303
Query: 202 DIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALS 261
I+ A +F++M +++V W+ MISG A++ ++AL+LFNEM+ + DQV +++ ++
Sbjct: 304 QIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVIT 363
Query: 262 ACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR 321
ACA +G L KWIH +V++N G P+ NNALI MYA CG +E A +F KM R+
Sbjct: 364 ACAHLGALDQAKWIHLFVDKNGFGGALPI----NNALIEMYAKCGSLERARRIFDKMPRK 419
Query: 322 NTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFF 366
N +SWT MI+ FA G A AL +TF+GVL ACSH G V+EGR+ F
Sbjct: 420 NVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIF 479
Query: 367 ECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNN 426
M I P+ HYGCMVDLF RA L+ EA LV+ MP+ PN + GSL+ CR+H
Sbjct: 480 YSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGE 539
Query: 427 AELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSW 486
EL A++L+ E+DP+ ++ L +N+YA A+RW+DV VR+ M G+ K G S
Sbjct: 540 IELGEFAAKRLL-ELDPDHDGAHVFL-SNIYAKARRWEDVGQVRKLMKHKGISKERGCSR 597
Query: 487 VQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFL 534
++N +H+F+ D ++K A IY+ L E+ + GY P+ + +
Sbjct: 598 FELNNEIHEFLVADRSHKHADEIYEKLYEVVSKLKLVGYSPNTCSILV 645
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 202/434 (46%), Gaps = 88/434 (20%)
Query: 23 IFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKL-LAFYVTSGYLINAHKVFEKTENP 81
+FS L + L Q+H+QI+ + + +L KL ++ S L A VF P
Sbjct: 26 LFSALSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKP 85
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVH 141
T + N+ +R +RSE PEK++ +Y++M + D +++ LL +R EG ++H
Sbjct: 86 ETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIH 145
Query: 142 GRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKR 200
G G+ S+ F++T L+ +Y CG + ARL+FD M R VV+W+ ++ GY +
Sbjct: 146 GLAAKLGFDSDPFVQTGLVRMY----AACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQS 201
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
G + A +F+EM + NV D++ L L
Sbjct: 202 GLFNDALLLFEEMKNYNVEP-------------------------------DEMMLSTVL 230
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC--------------- 305
SAC G+L GK IH ++ EN ++ +P L +AL+ MYASC
Sbjct: 231 SACGRAGNLSYGKMIHDFIMEN-NIVVDP---HLQSALVTMYASCGSMDLALNLFEKMTP 286
Query: 306 ----------------GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------ 343
G+IE A VF +M +++ V W++MI+G+A+ QEAL
Sbjct: 287 KNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEM 346
Query: 344 ---------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGL 394
+T L V++AC+H G +D+ + +++N G + +++++++ G
Sbjct: 347 QSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKN-GFGGALPINNALIEMYAKCGS 405
Query: 395 MDEAFSLVQNMPMK 408
++ A + MP K
Sbjct: 406 LERARRIFDKMPRK 419
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 200/556 (35%), Positives = 309/556 (55%), Gaps = 55/556 (9%)
Query: 32 TTKTLFQIHSQIIINGFS--QKNYILAKLLAFYVTSGYLINAHKVFEK-TENPSTAIWNQ 88
+ + LF+I +QII + N I K + + G L ++ +F P+ +N
Sbjct: 36 SMRQLFEIQAQIIASPIPSIDPNIIAVKFIGVSSSHGNLRHSVLIFNHFLSFPNIFAYNA 95
Query: 89 MIRGHARSETPEKSV-YLYKQMI-DKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLA 146
+++ ++ ++ Y Q++ PDEYT++ +L CA EG++VH V
Sbjct: 96 LLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTK 155
Query: 147 SGYCSNVFIRTNLMNLYLMSGGEC----------------------------GVGCARLL 178
G SN+F+R +L++LY G C V AR++
Sbjct: 156 YGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMV 215
Query: 179 FDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQAL 238
FD M +++VSW++++ GY + G+++ A ++F+ MP RNVVSW MI+G AQN K A+
Sbjct: 216 FDGMMEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAI 275
Query: 239 SLFNEMRR-ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
LF +M+ + + V LV+ LSACA +G L LGKWIH ++ N + V + L NA
Sbjct: 276 ELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRN----KIEVGLFLGNA 331
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------------- 343
L MYA CG + EA GVF +M R+ +SW+ +I G A GYA EA
Sbjct: 332 LADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPN 391
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
++F+G+L+AC+H G VD+G ++F+ M Q +GI P+IEHYGC+VDL SRAG +D+A SL+
Sbjct: 392 DISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLI 451
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKR 462
+MPM+PN V G+LL GCRI+ +AE +V +++ E+D +G L +ANVYA+ R
Sbjct: 452 NSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRIL-ELDSNH-SGSLVYLANVYASMGR 509
Query: 463 WQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQ 522
D A+ R +M K PG SW++IN +++F GDS++ Q+ IY + E+ +
Sbjct: 510 LDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKV 569
Query: 523 EGYKPDISELFLGIEE 538
GYKP + I+E
Sbjct: 570 AGYKPKTDLVIHNIDE 585
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 183/507 (36%), Positives = 293/507 (57%), Gaps = 24/507 (4%)
Query: 47 GFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLY 106
G ++ L+ Y+ G + A ++F++ N + ++N ++ + E + +
Sbjct: 261 GMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVIL 320
Query: 107 KQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMS 166
+M+ K PD+ T ++ CA+ G G+ H VL +G I ++++Y M
Sbjct: 321 DEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMY-MK 379
Query: 167 GGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMIS 226
G+ C +F+ MP ++VV+WNSL+ G V+ GD++ AW+IFDEM R++VSW TMI
Sbjct: 380 CGKREAACK--VFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIG 437
Query: 227 GCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVG 286
Q +A+ LF EM+ + D+V +V SAC +G L L KW+ +Y+E+N
Sbjct: 438 ALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKN---- 493
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--- 343
V + L AL+ M++ CG+ A VF++M++R+ +WT+ I A +G + A+
Sbjct: 494 DIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELF 553
Query: 344 ------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSR 391
+ F+ +L+ACSHGG VD+GRQ F M + GI+P I HYGCMVDL R
Sbjct: 554 NEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGR 613
Query: 392 AGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLA 451
AGL++EA L+Q+MP++PND V GSLL CR H N ELA A+KL ++ PE+ G
Sbjct: 614 AGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKL-TQLAPER-VGIHV 671
Query: 452 LVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYK 511
L++N+YA+A +W DVA VR +M + GV+K PG S +++ G++H+F +GD ++ + + I
Sbjct: 672 LLSNIYASAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGL 731
Query: 512 TLGEITMQAMQEGYKPDISELFLGIEE 538
L EI + + GY PD + + L ++E
Sbjct: 732 MLEEINCRLSEAGYVPDTTNVLLDVDE 758
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 218/455 (47%), Gaps = 63/455 (13%)
Query: 6 IIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGF--SQKNYILAKLLAFYV 63
++PA+ + +T LL T K L Q+H ++ G + L KL+A V
Sbjct: 12 LVPAS-LKEANPITRNSSSKLLVNCKTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSV 70
Query: 64 TSGYLIN---AHKVFEKTEN--PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDE 118
G L + A F + S ++N +IRG+A + ++++ LY QM+ PD+
Sbjct: 71 QIGTLESLDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDK 130
Query: 119 YTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLL 178
YT+ FLLS C++ EG QVHG VL G ++F+ +L++ Y ECG
Sbjct: 131 YTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFY----AECG------- 179
Query: 179 FDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQAL 238
+D K+FD M RNVVSWT++I+G + S++A+
Sbjct: 180 -----------------------KVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAV 216
Query: 239 SLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNAL 298
SLF +M A V + V +V +SACA++ DL+LGK + SY+ E +G E + + NAL
Sbjct: 217 SLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISE---LGMELSTIMV-NAL 272
Query: 299 IHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------------- 343
+ MY CG+I A +F + +N V + ++++ + +A + L
Sbjct: 273 VDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDK 332
Query: 344 LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQ 403
+T L ++AC+ G + G+ + +N G++ ++D++ + G + A + +
Sbjct: 333 VTMLSTIAACAQLGDLSVGKSSHAYVLRN-GLEGWDNISNAIIDMYMKCGKREAACKVFE 391
Query: 404 NMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
+MP K SL+ G + ELA ++ +++
Sbjct: 392 HMPNK-TVVTWNSLIAGLVRDGDMELAWRIFDEML 425
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 170/414 (41%), Gaps = 85/414 (20%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H ++ G ++ L+ FY G + K+F+ + W +I G++ +
Sbjct: 151 QVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRD 210
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++V L+ QM + EP+ T ++S CA+ G++V + G + +
Sbjct: 211 LSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVN 270
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y+ G C AR +FD+ +++V +N+++ YV I DEM
Sbjct: 271 ALVDMYMKCGDICA---ARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEM---- 323
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
Q G +++ + ++ACA++GDL +GK H+
Sbjct: 324 -----------LQKGPRPDKVTML----------------STIAACAQLGDLSVGKSSHA 356
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
YV N G + +++NA+I MY CG+ E A VF M + V+W S+I G + G
Sbjct: 357 YVLRNGLEGWD----NISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDG 412
Query: 338 -------------------------------YAQEAL---------------LTFLGVLS 351
+EA+ +T +G+ S
Sbjct: 413 DMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIAS 472
Query: 352 ACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
AC + G +D + + +N I ++ +VD+FSR G A + + M
Sbjct: 473 ACGYLGALDLAKWVCTYIEKN-DIHVDLQLGTALVDMFSRCGDPSSAMHVFKRM 525
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 178/497 (35%), Positives = 297/497 (59%), Gaps = 24/497 (4%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+I ++ GF ++ ++ V+ G L A K+F+K+ WN MI G+ R
Sbjct: 128 EILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRG 187
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ Y++M + +PDE T ++S CA+ G + H + +G V +
Sbjct: 188 WAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLAN 247
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
LM++Y+ G + AR LFD M +++VSW +++ GY + G +D AWK+FDEMP ++
Sbjct: 248 ALMDMYMKCGN---LESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKD 304
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VV W MI G + ++AL+LFNEM+ + D+V +V+ LSAC+++G L +G WIH
Sbjct: 305 VVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHH 364
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y+E++ + V+L ALI MYA CG+I +A VF+++ RN+++WT++I+G A G
Sbjct: 365 YIEKH----ELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHG 420
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
A A+ +TFLG+LSAC HGG V+EGR++F M+ + + P+++HY
Sbjct: 421 NAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHY 480
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
CMVDL RAGL++EA L+++MP++ + V G+L CRIH N + + A KL+ ++D
Sbjct: 481 SCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLL-QMD 539
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P + Y+ L+AN+Y A+ W++ R+ M + GV K PG S +++NG++++F+ D +
Sbjct: 540 PHDSGIYV-LLANMYGEAEMWKEAGKARKLMRQRGVEKTPGCSSIEVNGIVYEFIVRDKS 598
Query: 503 YKQASLIYKTLGEITMQ 519
+ Q+ IY+ L ++T Q
Sbjct: 599 HPQSEQIYECLIQLTRQ 615
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 212/453 (46%), Gaps = 89/453 (19%)
Query: 24 FSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY--LINAHKVFEKTENP 81
SLL+ + L QI SQ+++ G + + ++L+AF S + L + T NP
Sbjct: 10 LSLLEKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNP 69
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKE-TEPDEYTYSFLLSVCARCGLFREGEQV 140
+T WN IRG SE P ++V LYK+++ + T+PD YTY L CAR L R G ++
Sbjct: 70 NTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEI 129
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKR 200
G VL G+ S++F+ +++L + G G AR +FD R +VSWNS++ GYV+R
Sbjct: 130 LGHVLHLGFDSDIFVSNAVIHLLVSCGDLDG---ARKMFDKSCVRDLVSWNSMINGYVRR 186
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
G W + +AL+ + EM+ + D+V ++ +
Sbjct: 187 G-----W--------------------------AYEALNFYREMKVEGIKPDEVTMIGVV 215
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
S+CA++ DL LG+ H Y+EEN + V L NAL+ MY CG +E A +F M
Sbjct: 216 SSCAQLEDLDLGRESHCYIEEN----GLKLTVPLANALMDMYMKCGNLESARKLFDSMTN 271
Query: 321 RNTVSWTSMITGFAKQGY-------------------------------AQEAL------ 343
+ VSWT+M+ G+A+ G +EAL
Sbjct: 272 KTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEM 331
Query: 344 ---------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGL 394
+T + LSACS G +D G + ++ + + ++D++++ G
Sbjct: 332 QAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKH-ELSLNVALGTALIDMYAKCGK 390
Query: 395 MDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNA 427
+ +A + Q +P + N +++ G +H NA
Sbjct: 391 ITKAIQVFQELPGR-NSLTWTAIISGLALHGNA 422
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 187/513 (36%), Positives = 293/513 (57%), Gaps = 26/513 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H ++ G Y+ L+ Y G + A VF++ WN MI G+ R +
Sbjct: 156 KLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMK 215
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E+S+ L +M P T +LS C++ ++VH V ++ +
Sbjct: 216 EYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLEN 275
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L+N Y CG + A +F M AR V+SW S++KGYV+RG++ A FD+MP R
Sbjct: 276 ALVNAY----AACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVR 331
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
+ +SWT MI G + G ++L +F EM+ A + D+ +V+ L+ACA +G L++G+WI
Sbjct: 332 DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIK 391
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+Y+++N + + V + NALI MY CG E+A VF M +R+ +WT+M+ G A
Sbjct: 392 TYIDKN-KIKND---VVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANN 447
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G QEA+ +T+LGVLSAC+H G VD+ R+FF M + I+P + H
Sbjct: 448 GQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVH 507
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YGCMVD+ RAGL+ EA+ +++ MPM PN V G+LL R+HN+ +A A+K++ E+
Sbjct: 508 YGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKIL-EL 566
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+P+ A Y AL+ N+YA KRW+D+ VR+K++ + ++K PG S +++NG H+FVAGD
Sbjct: 567 EPDNGAVY-ALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDK 625
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFL 534
++ Q+ IY L E+ ++ Y PD SEL
Sbjct: 626 SHLQSEEIYMKLEELAQESTFAAYLPDTSELLF 658
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 200/416 (48%), Gaps = 71/416 (17%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVT--SGYLIN 70
T S + + S+L + TT Q+HSQ I G + KL F+ + G++
Sbjct: 27 TESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSY 86
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
A+K+F K P +WN MI+G ++ + + V LY M+ + PD +T+ FLL+ R
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR 146
Query: 131 -CGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV-GCARLLFDDMPARSVV 188
G G+++H V+ G SN++++ L+ +Y + CG+ AR +FD V
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSL----CGLMDMARGVFDRRCKEDVF 202
Query: 189 SWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR 248
SWN ++ GY + + + + ++ EM RN+VS T+
Sbjct: 203 SWNLMISGYNRMKEYEESIELLVEM-ERNLVSPTS------------------------- 236
Query: 249 VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEI 308
V L+ LSAC+++ D L K +H YV E EP L L NAL++ YA+CGE+
Sbjct: 237 -----VTLLLVLSACSKVKDKDLCKRVHEYVSE---CKTEPSL-RLENALVNAYAACGEM 287
Query: 309 EEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFEC 368
+ A +FR M+ R+ +SWTS++ G+ ++G + A R +F+
Sbjct: 288 DIAVRIFRSMKARDVISWTSIVKGYVERGNLKLA--------------------RTYFDQ 327
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP---MKPNDAVLGSLLLGC 421
M ++ RI + M+D + RAG +E+ + + M M P++ + S+L C
Sbjct: 328 M----PVRDRIS-WTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTAC 378
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 193/542 (35%), Positives = 306/542 (56%), Gaps = 30/542 (5%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAH 72
TS + + SL+ + L QIH+ ++ G + KL Y G L +
Sbjct: 40 TSDRFQEVERFASLIDKSKSVAHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSV 99
Query: 73 KVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCG 132
VF + P+ ++ +I H +S +++ Y QM+ EP+ +T+S +L C+
Sbjct: 100 FVFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS--- 156
Query: 133 LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNS 192
G+ +H + + G S++++RT L+++Y G V CAR LFD MP RS+VS +
Sbjct: 157 -LESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGD---VVCARQLFDKMPERSLVSLTT 212
Query: 193 LLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLD 252
+L Y K G++D A +F+ M R+VV W MI G AQ+G ++L LF M A+ +
Sbjct: 213 MLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPN 272
Query: 253 QVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAY 312
+V ++A LSAC ++G L+ G+WIHSY+E N + + V + ALI MY+ CG +E+A
Sbjct: 273 EVTVLAVLSACGQLGALESGRWIHSYIE-NKGI---QINVHVGTALIDMYSKCGSLEDAR 328
Query: 313 GVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGG 357
VF +++ ++ V+W SMI G+A G++Q AL +TF+G+LSAC HGG
Sbjct: 329 LVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGG 388
Query: 358 FVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSL 417
V+EGR FF M +GI+P+IEHYGCMV+L RAG ++EA+ LV+NM + + + G+L
Sbjct: 389 LVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTL 448
Query: 418 LLGCRIHNNAELASQVAQKLVAEIDPEQA-AGYLALVANVYAAAKRWQDVAAVRQKMIKM 476
L CR+H N +L ++A+ LV D + A +G L++N+YAA W+ VA +R M +
Sbjct: 449 LGCCRLHVNIKLGEEIAKFLV---DQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEH 505
Query: 477 GVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGI 536
G+ K G S ++++ +H+FVAG+ + ++ IY L EI GY P + +
Sbjct: 506 GIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHDL 565
Query: 537 EE 538
E
Sbjct: 566 RE 567
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 183/518 (35%), Positives = 290/518 (55%), Gaps = 26/518 (5%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
+IH GF +I L+A Y + +++A +F+K +P WN +I G+ ++
Sbjct: 141 LEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQN 200
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
+ ++ L++ M + +PD +LS C G G +H V +GY + ++
Sbjct: 201 GHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQ 260
Query: 157 TNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
T L+N+Y CG + AR ++D + ++ ++ ++L GY K G + A IFD+M
Sbjct: 261 TALINMY----ANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIE 316
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
R++V W+ MISG A++ + ++AL LF+EM + R DQ+ +++ +SAC+ +G L WI
Sbjct: 317 RDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWI 376
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
H+YV+ + GR +S+NNALI MYA CG + +A VF M R+N +SW+SMI FA
Sbjct: 377 HTYVDRS-GFGRA---LSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAM 432
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
G A A+ +TF+GVL AC H G V+EG + F M GI P E
Sbjct: 433 HGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTRE 492
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HYGCMVDL+ RA + +A L++ MP PN + GSL+ C++H AEL A++L+ E
Sbjct: 493 HYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLL-E 551
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
++P+ G L +++N+YA KRW DV +R+ M G+ K S ++IN +H F+ D
Sbjct: 552 LEPDH-DGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMAD 610
Query: 501 STYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+KQ+ IY+ L E+ + GYKP S + + +EE
Sbjct: 611 RYHKQSDEIYEKLDEVVSKLKLVGYKPSTSGILIDLEE 648
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 208/457 (45%), Gaps = 97/457 (21%)
Query: 36 LFQIHSQIIINGFSQKNY--ILAKL----LAFYVTSGYLINAHKVFEKTENPSTAIWNQM 89
L QIH+QI+ + + +N +L+KL +S L A VF + NP T NQ+
Sbjct: 32 LKQIHAQILHSNTTPENTNTLLSKLALSICTLSSSSSSLHYALSVFSQIPNPHTHFSNQL 91
Query: 90 IRGHARSETPEKSVYLYKQM-IDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASG 148
+R +RS PEK+++LY + D +++ LL ++ F G ++HG G
Sbjct: 92 LRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLASKLG 151
Query: 149 YCSNVFIRTNLMNLYLMSGGEC-GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAW 207
+ + FI+T L+ +Y C + ARLLFD M V+WN ++ GY + G D A
Sbjct: 152 FVDDPFIQTGLIAMY----ASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDAL 207
Query: 208 KIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIG 267
++F+ +MR + + D V L LSAC G
Sbjct: 208 RLFE-------------------------------DMRSSDMKPDSVILCTVLSACGHAG 236
Query: 268 DLKLGKWIHSYVEEN-FSVGREPVLVSLNNALIHMYASCGE------------------- 307
+L G+ IH +V++N +++ L ALI+MYA+CG
Sbjct: 237 NLSYGRTIHEFVKDNGYAIDSH-----LQTALINMYANCGAMDLARKIYDGLSSKHLIVS 291
Query: 308 ------------IEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------ 343
+++A +F +M R+ V W++MI+G+A+ QEAL
Sbjct: 292 TAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSV 351
Query: 344 ---LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFS 400
+T L V+SACSH G + + ++++ G + ++D++++ G + +A
Sbjct: 352 PDQITMLSVISACSHVGALAQANWIHTYVDRS-GFGRALSVNNALIDMYAKCGNLVKARE 410
Query: 401 LVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
+ +NMP K N S++ +H NA+ A ++ +++
Sbjct: 411 VFENMPRK-NVISWSSMINAFAMHGNADSAIKLFRRM 446
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 178/516 (34%), Positives = 292/516 (56%), Gaps = 55/516 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH+ I+ GF ++ L+ Y G + A +VF++ + WN M G+ +S
Sbjct: 145 QIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSG 204
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E+ V L+ +M++ + DE T +L+ C R GE ++ V G N + T
Sbjct: 205 NWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLIT 264
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
+L+++Y K G +D A ++FD+M R+
Sbjct: 265 SLVDMY----------------------------------AKCGQVDTARRLFDQMDRRD 290
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VV+W+ MISG +Q + R+AL LF+EM++A + +++ +V+ LS+CA +G L+ GKW+H
Sbjct: 291 VVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHF 350
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
++++ R + V+L AL+ YA CG +E + VF KM +N +SWT +I G A G
Sbjct: 351 FIKKK----RMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNG 406
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
++AL +TF+GVLSACSH G VDEGR F M++++GI+PRIEHY
Sbjct: 407 QGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHY 466
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
GCMVD+ RAGL++EAF ++NMP++PN + +LL C++H N E+ + ++L+ ++
Sbjct: 467 GCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLII-LE 525
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P + Y+ L++N+YA+ RW+D VR +M + G++K PG S ++++GV+H+F A D+
Sbjct: 526 PTHSGDYI-LLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNV 584
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ Q+ IY + ++ Q GY P+ +E L EE
Sbjct: 585 HSQSEEIYNAIEDMMKQIKSAGYVPNTAEARLDAEE 620
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 350 bits (899), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 187/513 (36%), Positives = 293/513 (57%), Gaps = 26/513 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H ++ G Y+ L+ Y G + A VF++ WN MI G+ R +
Sbjct: 156 KLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMK 215
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E+S+ L +M P T +LS C++ ++VH V ++ +
Sbjct: 216 EYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLEN 275
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L+N Y CG + A +F M AR V+SW S++KGYV+RG++ A FD+MP R
Sbjct: 276 ALVNAY----AACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVR 331
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
+ +SWT MI G + G ++L +F EM+ A + D+ +V+ L+ACA +G L++G+WI
Sbjct: 332 DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIK 391
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+Y+++N + + V + NALI MY CG E+A VF M +R+ +WT+M+ G A
Sbjct: 392 TYIDKN-KIKND---VVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANN 447
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G QEA+ +T+LGVLSAC+H G VD+ R+FF M + I+P + H
Sbjct: 448 GQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVH 507
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YGCMVD+ RAGL+ EA+ +++ MPM PN V G+LL R+HN+ +A A+K++ E+
Sbjct: 508 YGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKIL-EL 566
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+P+ A Y AL+ N+YA KRW+D+ VR+K++ + ++K PG S +++NG H+FVAGD
Sbjct: 567 EPDNGAVY-ALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDK 625
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFL 534
++ Q+ IY L E+ ++ Y PD SEL
Sbjct: 626 SHLQSEEIYMKLEELAQESTFAAYLPDTSELLF 658
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 200/416 (48%), Gaps = 71/416 (17%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVT--SGYLIN 70
T S + + S+L + TT Q+HSQ I G + KL F+ + G++
Sbjct: 27 TESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSY 86
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
A+K+F K P +WN MI+G ++ + + V LY M+ + PD +T+ FLL+ R
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR 146
Query: 131 -CGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV-GCARLLFDDMPARSVV 188
G G+++H V+ G SN++++ L+ +Y + CG+ AR +FD V
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSL----CGLMDMARGVFDRRCKEDVF 202
Query: 189 SWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR 248
SWN ++ GY + + + + ++ EM RN+VS T+
Sbjct: 203 SWNLMISGYNRMKEYEESIELLVEM-ERNLVSPTS------------------------- 236
Query: 249 VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEI 308
V L+ LSAC+++ D L K +H YV E EP L L NAL++ YA+CGE+
Sbjct: 237 -----VTLLLVLSACSKVKDKDLCKRVHEYVSE---CKTEPSL-RLENALVNAYAACGEM 287
Query: 309 EEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFEC 368
+ A +FR M+ R+ +SWTS++ G+ ++G + A R +F+
Sbjct: 288 DIAVRIFRSMKARDVISWTSIVKGYVERGNLKLA--------------------RTYFDQ 327
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP---MKPNDAVLGSLLLGC 421
M ++ RI + M+D + RAG +E+ + + M M P++ + S+L C
Sbjct: 328 M----PVRDRIS-WTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTAC 378
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 187/538 (34%), Positives = 300/538 (55%), Gaps = 52/538 (9%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+++ ++ +Q Y++ + ++ T + A + + E P+ ++N MI+G +S
Sbjct: 1 MYAVMVKTNTNQDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQ 60
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
P +++ LY QM+ P YT+ L+ C R E VHG V +G+ S+VF++T+
Sbjct: 61 PVQALELYVQMLRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTS 120
Query: 159 LMNLY-------------------------LMSGGECGVG---CARLLFDDMPARSVVSW 190
L++ Y M G VG A LFD MP R++ +W
Sbjct: 121 LVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLATW 180
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG 250
N+L+ GY + ++D A +F++MP R+++SWTTMI+ +QN + R+AL +FNEM + +
Sbjct: 181 NTLIDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGIS 240
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYV-EENFSVGREPVLVSLNNALIHMYASCGEIE 309
D+V + +SACA +G L LGK IH Y+ + F++ V + +ALI MYA CG ++
Sbjct: 241 PDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNLD-----VYIGSALIDMYAKCGSLD 295
Query: 310 EAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACS 354
+ +F K++ +N W S+I G A GYA+EAL +TF+ VLSAC+
Sbjct: 296 RSLLMFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACN 355
Query: 355 HGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL 414
H G ++EGR+ F M ++ I P +EHYGCMVDL S+AGL++EA L++ M ++PN +
Sbjct: 356 HAGLIEEGRKRFASMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIW 415
Query: 415 GSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMI 474
G+LL GC++H N E+A A KL+ ++P +GY L+ N+ A RW + A +R M
Sbjct: 416 GALLSGCKLHRNLEIAQVAANKLMV-LEPGN-SGYYTLLVNMNAEVNRWGEAAKIRLTMK 473
Query: 475 KMGVRKP-PGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISE 531
+ GV K PG SW+++ +H F A D ++ + IY L E+ Q GY P++ E
Sbjct: 474 EQGVEKRCPGSSWIEMESQVHQFAASDKSHAASDEIYSLLAELDGQMKLAGYVPELCE 531
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH I+ +GF+ YI + L+ Y G L + +F K + WN +I G A
Sbjct: 264 EIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSVIEGLAVHG 323
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
E+++ ++ +M ++ +P+ T+ +LS C GL EG +
Sbjct: 324 YAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRK 365
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 203/565 (35%), Positives = 308/565 (54%), Gaps = 55/565 (9%)
Query: 22 QIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENP 81
L+ NT L QIH+QI ++ + ++ +L++ + L A +F ++P
Sbjct: 42 HFIPLIHASNTLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHP 101
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVH 141
+ ++N +IRG A + E SV + M+ PD T F+L A G +H
Sbjct: 102 NLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLH 161
Query: 142 GRVLASGYCSNVFIRTNLMNLYLMSG-----------------------------GECGV 172
G V+ G + F+R +L+++Y+ G G C V
Sbjct: 162 GGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKV 221
Query: 173 G---CARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCA 229
G A LF+ MP R+ SWNSL+ G+V+ GD+D A ++F +MP +NVVSWTTMI+G +
Sbjct: 222 GDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFS 281
Query: 230 QNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEEN-FSVGRE 288
QNG +ALS+F M V + + +V+AL AC +IG L++G+ IH+Y+ N F + R
Sbjct: 282 QNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNR- 340
Query: 289 PVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----- 343
+ AL+ MYA CG I+ A VF + + ++ ++W+ MI G+A G +AL
Sbjct: 341 ----GIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVK 396
Query: 344 ----------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAG 393
+ FL +L+ACSH G VD+G FFE M ++ I+P ++HY +VDL RAG
Sbjct: 397 MKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAG 456
Query: 394 LMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALV 453
+DEA S +Q+MP+ P+ + G+L CR H N E+A A+KL+ +++P+ Y+ L
Sbjct: 457 RLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLL-QLEPKHPGSYVFL- 514
Query: 454 ANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTL 513
+NVYAA RW+DV VR M GV K PG S++++ G +H FVAGD + +A I L
Sbjct: 515 SNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKL 574
Query: 514 GEITMQAMQEGYKPDISELFLGIEE 538
EIT A QEGY P+ + + IEE
Sbjct: 575 EEITASAKQEGYMPETAWVLHNIEE 599
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 186/516 (36%), Positives = 289/516 (56%), Gaps = 55/516 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H GF+ YI L+ Y G L++A KVF+K N S W MI +A+ +
Sbjct: 158 QLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWD 217
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
P +++ L+++M +P+E T +L+ CAR +QVH + +G + + +
Sbjct: 218 LPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTS 277
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
LM++Y C GC L D +F++MP +N
Sbjct: 278 ALMDVY------CKCGCYPLARD----------------------------LFNKMPEKN 303
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+ W MI+G ++ +ALSLFNEM+ + V D+V + + L AC +G L+LGKW+H
Sbjct: 304 LFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHV 363
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y+E+ + V V+L AL+ MYA CG IE A VF++M ++ ++WT++I G A G
Sbjct: 364 YIEKE----KIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCG 419
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+AL +TF+GVL+ACSH G V+EG +F M +GI+P IEHY
Sbjct: 420 QGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHY 479
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
GCMVD+ RAG + EA L+QNMPM P+ VL LL CRIH N +A + AQ+L+ E+D
Sbjct: 480 GCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLI-ELD 538
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P+ Y+ L++N+Y++ K W+ +R+ M++ ++KPPG S +++ GV+H+FV GD +
Sbjct: 539 PKNGGTYV-LLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVS 597
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ Q+S IY+TL ++ + GY PD SE+ ++E
Sbjct: 598 HPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDE 633
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 187/399 (46%), Gaps = 59/399 (14%)
Query: 27 LQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV--TSGYLINAHKVFEKTENPSTA 84
L+ T L QIH+Q++ + +K++AF SG L A VF + NP+T
Sbjct: 47 LEKCTTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTF 106
Query: 85 IWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRV 144
N +IRG+ P +++ Y+ M+ + +PD +T+ L CG+ EG+Q+H
Sbjct: 107 TCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFK---SCGVLCEGKQLHCHS 163
Query: 145 LASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDID 204
G+ S+ +I+ LMN+Y G C V AR +FD M +SVVSW +++ Y +
Sbjct: 164 TKLGFASDAYIQNTLMNMYSNCG--CLVS-ARKVFDKMVNKSVVSWATMIGAYAQ----- 215
Query: 205 GAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACA 264
W ++PH +A+ LF M A V +++ LV L+ACA
Sbjct: 216 --W----DLPH--------------------EAIKLFRRMEIASVKPNEITLVNVLTACA 249
Query: 265 EIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTV 324
DL+ K +H Y++E +G VL S AL+ +Y CG A +F KM +N
Sbjct: 250 RSRDLETAKQVHKYIDET-GIGFHTVLTS---ALMDVYCKCGCYPLARDLFNKMPEKNLF 305
Query: 325 SWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECM 369
W MI G + +EAL +T +L AC+H G ++ G+ +
Sbjct: 306 CWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGK-WLHVY 364
Query: 370 NQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
+ I+ + +VD++++ G ++ A + Q MP K
Sbjct: 365 IEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEK 403
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 134/346 (38%), Gaps = 62/346 (17%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGH 93
+T Q+H I G + + L+ Y G A +F K + WN MI GH
Sbjct: 255 ETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGH 314
Query: 94 ARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNV 153
E+++ L+ +M + D+ T + LL C G G+ +H + +V
Sbjct: 315 VEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDV 374
Query: 154 FIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDE 212
+ T L+++Y +CG + A +F +MP + V++W +L
Sbjct: 375 ALGTALVDMY----AKCGSIESAMRVFQEMPEKDVMTWTAL------------------- 411
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
I G A G+ +AL LF+EM+ + V D + V L+AC+ G + G
Sbjct: 412 ------------IVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEG 459
Query: 273 KWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
+ + + G +P + ++ M G I EA + + M M
Sbjct: 460 IAYFNSMPNKY--GIQPS-IEHYGCMVDMLGRAGRIAEAEDLIQNM---------PMAPD 507
Query: 333 FAKQGYAQEALLTFLGVLSACS-HGGFVDEGR---QFFECMNQNWG 374
+ +G+LSAC HG V R Q E +N G
Sbjct: 508 Y----------FVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGG 543
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 198/550 (36%), Positives = 306/550 (55%), Gaps = 41/550 (7%)
Query: 7 IPANPATSSKALTTRQ--IFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVT 64
+P N T K R+ SLLQ + I+++II N Q +++ +LL
Sbjct: 17 LPPNSGTKPKNTPNRRRHFISLLQNCKHNNQIPPIYAKIIRNHHHQDPFVVFELLRVCSN 76
Query: 65 SGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFL 124
+ A K+F T+NP+ ++ +I G S ++LY QMI+ PD Y + +
Sbjct: 77 LNSIGYASKIFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSV 136
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV-GCARLLFDDMP 183
L C +EG +VH +VL G SN IR L+ LY G+CG AR +FD+MP
Sbjct: 137 LKACGCHLALKEGREVHSQVLKLGLSSNRSIRIKLIELY----GKCGAFEDARRVFDEMP 192
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
R VV+ ++ Y G D V WT MI G +NG+S +AL +F
Sbjct: 193 ERDVVASTVMINYYFDHGIKD-------------TVCWTAMIDGLVRNGESNRALEVFRN 239
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
M+R V ++V +V LSAC+E+G L+LG+W+ SY++++ R + + ALI+MY+
Sbjct: 240 MQREDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKH----RIELNHFVGGALINMYS 295
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLG 348
CG+I+EA VF +M+ +N +++ SMI GFA G + EA+ +TF+G
Sbjct: 296 RCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKSVEAVELFRGLIKQGFTPSSVTFVG 355
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
VL+ACSHGG + G + F M +++GI+P+IEHYGCMVDL R G ++EA+S ++ M +
Sbjct: 356 VLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRLGRLEEAYSFIRMMKVA 415
Query: 409 PNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAA 468
P+ +LG+LL C+IH N ELA +VA+ LVA + + +G L++N Y+++ +W++ A
Sbjct: 416 PDHVMLGALLSACKIHGNLELAERVAKSLVACKNAD--SGTYILLSNAYSSSGKWKEAAE 473
Query: 469 VRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
VR M + G+ K PG S +++N +H+F+ GD + Q IYK L E+ EGY P
Sbjct: 474 VRTNMREEGIEKEPGCSSIEVNNEIHEFLLGDLRHPQKEKIYKKLEELNQILRLEGYTPA 533
Query: 529 ISELFLGIEE 538
+ IE+
Sbjct: 534 TEVVLHDIEK 543
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 183/501 (36%), Positives = 298/501 (59%), Gaps = 30/501 (5%)
Query: 47 GFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLY 106
GF ++ + ++ G L A+ VF K+ WN MI G + +++ +Y
Sbjct: 188 GFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIY 247
Query: 107 KQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMS 166
K+M ++ P+E T ++S C++ G++ H + G + + LM++Y+
Sbjct: 248 KEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYV-- 305
Query: 167 GGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMI 225
+CG + AR+LFD+M +++VSW +++ GY + G +D A +I ++P ++VV W +I
Sbjct: 306 --KCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAII 363
Query: 226 SGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSV 285
SGC Q + ++AL+LF+EM+ + D+V +V LSAC+++G L +G WIH Y+E +
Sbjct: 364 SGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERH--- 420
Query: 286 GREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-- 343
+ + V+L AL+ MYA CG I A VF ++ +RN ++WT++I G A G AQ+AL
Sbjct: 421 -KLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSY 479
Query: 344 -------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFS 390
+TFLGVLSAC HGG V+EGR++F M+ + + P+++HY CMVDL
Sbjct: 480 FSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLG 539
Query: 391 RAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYL 450
RAG ++EA LV+NMPM + AVLG+L CR++ N ++ + A KL+ EIDP+ + Y+
Sbjct: 540 RAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLL-EIDPQDSGNYV 598
Query: 451 ALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIY 510
L+A++Y+ AK W++ + R+ M GV K PG S V+ING++H+FV D ++ Q+ IY
Sbjct: 599 -LLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSLVEINGIVHEFVVRDVSHPQSEWIY 657
Query: 511 KTLGEITMQ----AMQEGYKP 527
+ L +T Q + GY P
Sbjct: 658 ECLVTLTKQLDVIVRKHGYFP 678
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 212/480 (44%), Gaps = 93/480 (19%)
Query: 10 NPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV--TSGY 67
N T+ + + S+L+ + L QI +Q++ G + + ++L+AF S
Sbjct: 47 NWNTTHSFVRENPLLSILERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKE 106
Query: 68 LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKET-EPDEYTYSFLLS 126
L ++ + + + WN IRG+ S E LYK+M+ T +PD +TY LL
Sbjct: 107 LDYCTRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLK 166
Query: 127 VCARCGLFRE--GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPA 184
C CG + G V G VL G+ ++F+ + + L+S GE V A +F+
Sbjct: 167 GC--CGQYSSCLGLGVLGHVLKFGFECDIFVHNASITM-LLSCGELSV--AYDVFNKSRV 221
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
R +V+WNS++ G VKRG A KI+ EM E
Sbjct: 222 RDLVTWNSMITGCVKRGLAIEAIKIYKEM-----------------------------EA 252
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYAS 304
+ R +++ ++ +S+C+++ DL LGK H Y++E+ G E + L NAL+ MY
Sbjct: 253 EKVRP--NEITMIGMISSCSQVQDLNLGKEFHCYIKEH---GLE-FTIPLTNALMDMYVK 306
Query: 305 CGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY-------------------------- 338
CGE+ A +F M ++ VSWT+M+ G+A+ G+
Sbjct: 307 CGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGC 366
Query: 339 -----AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
+EAL +T + LSACS G +D G + ++ +
Sbjct: 367 VQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERH-KLSID 425
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
+ +VD++++ G + A + + +P + N +++ G +H NA+ A K++
Sbjct: 426 VALGTALVDMYAKCGNIARALQVFEEIPQR-NCLTWTAVICGLALHGNAQDALSYFSKMI 484
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 101/243 (41%), Gaps = 40/243 (16%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHAR-- 95
+ H I +G + L+ YV G L+ A +F+ + W M+ G+AR
Sbjct: 280 EFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFG 339
Query: 96 ---------SETPEKSVY--------------------LYKQMIDKETEPDEYTYSFLLS 126
+ PEKSV L+ +M + EPD+ T LS
Sbjct: 340 FLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLS 399
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPAR 185
C++ G G +H + +V + T L+++Y +CG + A +F+++P R
Sbjct: 400 ACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMY----AKCGNIARALQVFEEIPQR 455
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVV----SWTTMISGCAQNGKSRQALSLF 241
+ ++W +++ G G+ A F +M H +V ++ ++S C G + F
Sbjct: 456 NCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYF 515
Query: 242 NEM 244
+EM
Sbjct: 516 SEM 518
>gi|298205062|emb|CBI38358.3| unnamed protein product [Vitis vinifera]
Length = 549
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 199/552 (36%), Positives = 309/552 (55%), Gaps = 62/552 (11%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVT--SGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
+H+QII++G + + L KL++F +G L A ++F++ P+ ++N +IRG++ S
Sbjct: 7 LHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGYSNS 66
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
+ P +V L+++MI P+E+T F+L C + E VHG + G S VF++
Sbjct: 67 DDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLVFVQ 126
Query: 157 TNLMNLYLMSGGECG-VGCARLLFDDMPARS----------------------------- 186
L+ +Y++ CG + CAR LFDD+ ++
Sbjct: 127 NALIAVYVV----CGLIHCARKLFDDITDKTLIDIIVRNALVDMYAKCGNLHSAQAIFDR 182
Query: 187 -----VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
VVSW S++ Y + G I+ A +IFD+MP +NVVSW +MIS + G+ R+AL LF
Sbjct: 183 TQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLF 242
Query: 242 NEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHM 301
N+MR +RV D+ LV+ L+AC+++GDL +GK IH+Y+ N + V+L N+LI M
Sbjct: 243 NKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSN----KGAYGVTLYNSLIDM 298
Query: 302 YASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTF 346
YA CG + A +F +M +N VSW +I A G EA+ +T
Sbjct: 299 YAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITL 358
Query: 347 LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP 406
G+LSACSH G VD G +F+ M + + IEHY CMVDL R GL+ EA L+ MP
Sbjct: 359 TGLLSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMP 418
Query: 407 MKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDV 466
MKP+ V G+LL CRIH N E+ Q+ ++L+ E++P + G L++N+Y A+RW+DV
Sbjct: 419 MKPDVVVWGALLGACRIHGNVEIGKQILKQLL-ELEP-HSGGLYVLISNIYWEAQRWEDV 476
Query: 467 AAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYK 526
+R+ MI G++K S ++I+G +++F+ D +K +S IY L ++T GY
Sbjct: 477 KKIRKLMIDRGIKKGRAISSIEIDGCIYEFMVDDKRHKISSSIYAMLDQLTDHLRSAGYL 536
Query: 527 PDISELFLGIEE 538
+IS +F EE
Sbjct: 537 CNISSVFFEAEE 548
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH+ I+ N + + L+ Y G ++ A +F + + WN +I A
Sbjct: 275 KIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHG 334
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+++ L+++M T PDE T + LLS C+ GL G
Sbjct: 335 CGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMG 374
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 184/507 (36%), Positives = 296/507 (58%), Gaps = 25/507 (4%)
Query: 47 GFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLY 106
G ++ L+ Y+ G + A ++F++ + + ++N ++ +AR +++ +
Sbjct: 262 GLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAIL 321
Query: 107 KQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMS 166
+M+ + PD T +S A+ G+ HG V+ +G I ++++Y M
Sbjct: 322 DEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMY-MK 380
Query: 167 GGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMIS 226
G+ + C +FD M ++VVSWNSL G+++ GD++ AW++F+++P RN V W TMIS
Sbjct: 381 CGKPEMACR--VFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMIS 438
Query: 227 GCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVG 286
G Q A+ LF EM+ + D+V ++ SAC +G +L KW+H+Y+E+N
Sbjct: 439 GLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGI-- 496
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEA---- 342
P + LN AL+ M+A CG+ + A VF KM R+ +WT+ I A +G + A
Sbjct: 497 --PCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLF 554
Query: 343 -----------LLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSR 391
++ F+ VL+ACSHGG V++G F M ++ GI P+IEHYGCMVDL R
Sbjct: 555 NQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLM-EDHGISPQIEHYGCMVDLLGR 613
Query: 392 AGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLA 451
AGL+ EAF L+++MPM+PND V GSLL CR+H N E+A+ A++ + E+ P Q AG
Sbjct: 614 AGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAER-INELAP-QRAGVHV 671
Query: 452 LVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYK 511
L++N+YA+A +W DVA VR + + GVRK PG S VQ+NGV+H+F +GD ++ + + I
Sbjct: 672 LLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIAL 731
Query: 512 TLGEITMQAMQEGYKPDISELFLGIEE 538
L E+ + G+ PD+S + L ++E
Sbjct: 732 MLQEMNCRFSDAGHIPDLSNVLLDVDE 758
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 172/347 (49%), Gaps = 51/347 (14%)
Query: 5 EIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKL------ 58
+I A+P T L L+ T L Q+H QI NG Q L KL
Sbjct: 15 QIKEADPMTKDSCLNES-----LRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAE 69
Query: 59 LAFYVTSGYLINAHKVFEKTENPSTAIW--NQMIRGHARSETPEKSVYLYKQMIDKETEP 116
+A + Y A ++F++ A++ N +IRG++ + +++ LY +M+ P
Sbjct: 70 IASPESLDYARKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTP 129
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCAR 176
+ YT+ F+LS C + F EG QVHG V+ G +VFI+ L++ Y ECG
Sbjct: 130 NHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFY----AECG----- 180
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
+D K+F+ M RNVVSWT++I G A+ + ++
Sbjct: 181 -------------------------HMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKE 215
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
A+SLF EM A + V +V +SACA++ DL +G+ + +Y+ E + V+V N
Sbjct: 216 AVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGE-LGLKLNKVMV---N 271
Query: 297 ALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL 343
AL+ MY CG I+ A +F + RN V + ++++ +A+QG A+EAL
Sbjct: 272 ALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREAL 318
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 20/195 (10%)
Query: 222 TTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE 281
++I G + G R+A+ L+ M V + LS C +I G +H V
Sbjct: 100 NSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSV-- 157
Query: 282 NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQE 341
+G E V + N LIH YA CG ++ + VF M RN VSWTS+I G+A+ +E
Sbjct: 158 -VKMGLEED-VFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKE 215
Query: 342 AL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMV 386
A+ +T + V+SAC+ +D G + + + G+K +V
Sbjct: 216 AVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGE-LGLKLNKVMVNALV 274
Query: 387 DLFSRAGLMDEAFSL 401
D++ + G +D A L
Sbjct: 275 DMYMKCGAIDAAKRL 289
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 130/303 (42%), Gaps = 26/303 (8%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
H +I NG + I ++ Y+ G A +VF+ N + WN + G R+
Sbjct: 356 HGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDV 415
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
E + ++ Q+ E + ++ ++S + LF + ++ + G ++ R +
Sbjct: 416 ESAWEVFNQI----PERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKAD---RVTM 468
Query: 160 MNLYLMSGGECG-VGCARLL--------FDDMPARSVVSWNSLLKGYVKRGDIDGAWKIF 210
M + CG +G L + +P ++ +L+ + + GD A ++F
Sbjct: 469 MGI----ASACGYLGAPELAKWVHTYIEKNGIPCDMRLN-TALVDMFARCGDPQSAMQVF 523
Query: 211 DEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLK 270
++M R+V +WT I A G A LFN+M V D V V L+AC+ G ++
Sbjct: 524 NKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVE 583
Query: 271 LGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSM 329
G I S +E++ G P + ++ + G + EA+ + + M N V W S+
Sbjct: 584 QGLHIFSLMEDH---GISP-QIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSL 639
Query: 330 ITG 332
+
Sbjct: 640 LAA 642
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 187/515 (36%), Positives = 293/515 (56%), Gaps = 27/515 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+HS I + F YI + L+ Y G + +A +VF++ + + WN +I ++
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNG 232
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ +++ M++ EPDE T + ++S CA + G++VHGRV+ + N I +
Sbjct: 233 PAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILS 292
Query: 158 N-LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
N +++Y +C + AR +FD MP R+V++ S++ GY A +F +M
Sbjct: 293 NAFVDMY----AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAE 348
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
RNVVSW +I+G QNG++ +ALSLF ++R V + L ACA++ +L LG
Sbjct: 349 RNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQA 408
Query: 276 HSYVEEN---FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
H +V ++ F G E + + N+LI MY CG +EE Y VFRKM R+ VSW +MI G
Sbjct: 409 HVHVLKHGFKFQSGEEDDIF-VGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIG 467
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
FA+ GY EAL +T +GVLSAC H GFV+EGR +F M +++G+ P
Sbjct: 468 FAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAP 527
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
+HY CMVDL RAG ++EA S+++ MPM+P+ + GSLL C++H N L VA+KL
Sbjct: 528 LRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKL 587
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
+ E++P + Y+ L++N+YA +W+DV VR+ M K GV K PG SW++I G H F+
Sbjct: 588 L-EVEPSNSGPYV-LLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFM 645
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQEGYKPDISEL 532
D ++ + I+ L + + E +I L
Sbjct: 646 VKDKSHPRKKQIHSLLDILIAEMRPEQDHTEIGSL 680
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 152/287 (52%), Gaps = 28/287 (9%)
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYV 198
VH V+ SG+ + +FI+ L++ Y +CG + R +FD MP R++ +WNS++ G
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAY----SKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLT 97
Query: 199 KRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVA 258
K G +D A +F MP R+ +W +M+SG AQ+ + +AL F M + L++ + +
Sbjct: 98 KLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFAS 157
Query: 259 ALSACAEIGDLKLGKWIHSYVEENFSVGREPVL--VSLNNALIHMYASCGEIEEAYGVFR 316
LSAC+ + D+ G +HS + + P L V + +AL+ MY+ CG + +A VF
Sbjct: 158 VLSACSGLNDMNKGVQVHSL------IAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFD 211
Query: 317 KMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDE 361
+M RN VSW S+IT F + G A EAL +T V+SAC+ +
Sbjct: 212 EMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKV 271
Query: 362 GRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
G++ + +N ++ I VD++++ + EA + +MP++
Sbjct: 272 GQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 161/340 (47%), Gaps = 70/340 (20%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPST--------------- 83
+H+ +I +GFS + +I +L+ Y G L + +VF+K +
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 84 ----------------AIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSV 127
WN M+ G A+ + E+++ + M + +EY+++ +LS
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 128 CARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARS 186
C+ +G QVH + S + S+V+I + L+++Y +CG V A+ +FD+M R+
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY----SKCGNVNDAQRVFDEMGDRN 217
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
VVSWNSL+ + QNG + +AL +F M
Sbjct: 218 VVSWNSLITCF-------------------------------EQNGPAVEALDVFQMMLE 246
Query: 247 ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCG 306
+RV D+V L + +SACA + +K+G+ +H V +N + + + L+NA + MYA C
Sbjct: 247 SRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDII---LSNAFVDMYAKCS 303
Query: 307 EIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
I+EA +F M RN ++ TSMI+G+A + A L F
Sbjct: 304 RIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMF 343
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 186/531 (35%), Positives = 303/531 (57%), Gaps = 27/531 (5%)
Query: 26 LLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV--TSGYLINAHKVFEKTENPST 83
LL+ + + L IH+ ++ + ++L+AF + T+ L A +V + +NP+
Sbjct: 23 LLECCSNARDLKIIHAHMLRTHLFFDVFAASRLIAFCIDSTTNLLHYAIRVASQIQNPNL 82
Query: 84 AIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGR 143
I+N +IRG + SE PE S + Y + + PD T+ FL+ CA+ G Q HG+
Sbjct: 83 FIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQTHGQ 142
Query: 144 VLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDI 203
+ G+ + +++ +L+++Y G + AR +F M VVSW ++ GY + GD
Sbjct: 143 AIKHGFEQDFYVQNSLVHMYASVGD---INAARSVFQRMCRFDVVSWTCMIAGYHRCGDA 199
Query: 204 DGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSAC 263
A ++FD MP RN+V+W+TMISG A+N +A+ F ++ V ++ +V +S+C
Sbjct: 200 KSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSC 259
Query: 264 AEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNT 323
A +G L +G+ H YV N + + + L A++ MYA CG +E+A VF ++ ++
Sbjct: 260 AHLGALAMGEKAHEYVMRN----KLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDV 315
Query: 324 VSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFEC 368
+ WT++I G A GYA++AL +TF VL+ACSH G V+ G + FE
Sbjct: 316 LCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFES 375
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAE 428
M ++ G++PR+EHYGCMVDL RAG + +A V MP+KPN + +LL CRIH N E
Sbjct: 376 MKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIHKNVE 435
Query: 429 LASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
+ +V K++ E+ PE +G+ L++N+YA A +W+DV +RQ M GVRKPPG S ++
Sbjct: 436 VGERVG-KILLEMQPEY-SGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKPPGYSLIE 493
Query: 489 INGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQ-EGYKPDISELFLGIEE 538
I+G +H+F GD T+ + I + +I + ++ GY + +E I+E
Sbjct: 494 IDGKVHEFTIGDKTHPEIEKIERIWEDIILPKIKLAGYVGNTAETMFDIDE 544
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 187/503 (37%), Positives = 285/503 (56%), Gaps = 26/503 (5%)
Query: 48 FSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYK 107
F +I + L+A Y G +++A +F+K + WN MI G++++ + + LY+
Sbjct: 147 FHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYE 206
Query: 108 QMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSG 167
+M TEPD +LS CA G G+ +H + +G+ I+T+L+N+Y
Sbjct: 207 EMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMY---- 262
Query: 168 GECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMIS 226
CG + AR ++D +P++ +V ++L GY K G + A IFD M +++V W+ MIS
Sbjct: 263 ANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMIS 322
Query: 227 GCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVG 286
G A++ + +AL LFNEM+R R+ DQ+ +++ +SACA +G L KWIH+Y ++N G
Sbjct: 323 GYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKN-GFG 381
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--- 343
R + +NNALI MYA CG + +A VF M R+N +SW+SMI FA G A A+
Sbjct: 382 RT---LPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALF 438
Query: 344 ------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSR 391
+TF+GVL ACSH G V+EG++FF M I P+ EHYGCMVDL+ R
Sbjct: 439 HRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCR 498
Query: 392 AGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLA 451
A + +A L++ MP PN + GSL+ C+ H EL A +L+ E++P+ G L
Sbjct: 499 ANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLL-ELEPDH-DGALV 556
Query: 452 LVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYK 511
+++N+YA KRW DV VR+ M GV K S +++N +H F+ D +KQ+ IYK
Sbjct: 557 VLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMADRYHKQSDEIYK 616
Query: 512 TLGEITMQAMQEGYKPDISELFL 534
L + Q GY P S + +
Sbjct: 617 KLDAVVSQLKLVGYTPSTSGILV 639
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 120/487 (24%), Positives = 214/487 (43%), Gaps = 102/487 (20%)
Query: 17 ALTTRQIFS-----LLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV-----TSG 66
A++TR I S LL T + + QIH+QI+ + N +L KL+ +
Sbjct: 4 AMSTRLIPSPSEKGLLASCKTLRHVKQIHAQILRSKMDNSNLLLLKLVLCCCTLPSPSPS 63
Query: 67 YLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLS 126
L A +F NP T NQ++R +R TPE ++ LY + D +++ LL
Sbjct: 64 ALDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLK 123
Query: 127 VCARCGLFREGEQVHGRVLASGYC-SNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPA 184
++ G ++HG G+ ++ FI++ L+ +Y CG + AR LFD M
Sbjct: 124 AVSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMY----AACGRIMDARFLFDKMSH 179
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
R VV+WN ++ GY + D K+++ EM
Sbjct: 180 RDVVTWNIMIDGYSQNAHYDHVLKLYE-------------------------------EM 208
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEEN-FSVGREPVLVSLNNALIHMYA 303
+ + D + L LSACA G+L GK IH ++++N F VG + +L++MYA
Sbjct: 209 KTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSH-----IQTSLVNMYA 263
Query: 304 SCGE-------------------------------IEEAYGVFRKMQRRNTVSWTSMITG 332
+CG +++A +F +M ++ V W++MI+G
Sbjct: 264 NCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISG 323
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
+A+ EAL +T L V+SAC++ G + + + ++N G
Sbjct: 324 YAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKN-GFGR 382
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
+ ++D++++ G + +A + +NMP K N S++ +H +A+ A + ++
Sbjct: 383 TLPINNALIDMYAKCGNLVKAREVFENMPRK-NVISWSSMINAFAMHGDADSAIALFHRM 441
Query: 438 VAE-IDP 443
+ I+P
Sbjct: 442 KEQNIEP 448
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 82/196 (41%), Gaps = 34/196 (17%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
IH+ NGF + I L+ Y G L+ A +VFE + W+ MI A
Sbjct: 371 IHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGD 430
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
+ ++ L+ +M ++ EP+ T+ +L C+ GL EG++ ++
Sbjct: 431 ADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFF---------------SS 475
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH-RN 217
++N + +S GC ++ Y + + A ++ + MP N
Sbjct: 476 MINEHRISPQREHYGC------------------MVDLYCRANHLRKAMELIETMPFPPN 517
Query: 218 VVSWTTMISGCAQNGK 233
V+ W +++S C +G+
Sbjct: 518 VIIWGSLMSACQNHGE 533
>gi|356518302|ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 535
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 177/512 (34%), Positives = 305/512 (59%), Gaps = 27/512 (5%)
Query: 29 IRNTTKT--LFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIW 86
+RN K L +IH+ I+ SQ N+++ K+L ++ A +F++ ENP+ +
Sbjct: 14 LRNCPKIAELKKIHAHIVKLSLSQSNFLVTKMLDLCDNLSHVDYATMIFQQLENPNVFSY 73
Query: 87 NQMIRGHARSETPEKSVYLYKQMID-KETEPDEYTYSFLLSVCARCGLFREGEQVHGRVL 145
N +IR + + ++ ++ QM+ K PD++T+ F++ CA R G+QVH V
Sbjct: 74 NAIIRTYTHNHKHPLAITVFNQMLTTKSASPDKFTFPFVIKSCAGLLCRRLGQQVHAHVC 133
Query: 146 ASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDG 205
G ++ L+++Y G G A ++++M R VSWNSL+ G+V+ G +
Sbjct: 134 KFGPKTHAITENALIDMYTKCGDMSG---AYQVYEEMTERDAVSWNSLISGHVRLGQMKS 190
Query: 206 AWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAE 265
A ++FDEMP R +VSWTTMI+G A+ G AL +F EM+ + D++++++ L ACA+
Sbjct: 191 AREVFDEMPCRTIVSWTTMINGYARGGCYADALGIFREMQVVGIEPDEISVISVLPACAQ 250
Query: 266 IGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVS 325
+G L++GKWIH Y E++ + V NAL+ MYA CG I+EA+G+F +M ++ +S
Sbjct: 251 LGALEVGKWIHKYSEKSGFLKNAGVF----NALVEMYAKCGCIDEAWGLFNQMIEKDVIS 306
Query: 326 WTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMN 370
W++MI G A G A+ +TF+GVLSAC+H G +EG ++F+ M
Sbjct: 307 WSTMIGGLANHGKGYAAIRVFEDMQKAGVTPNGVTFVGVLSACAHAGLWNEGLRYFDVMR 366
Query: 371 QNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELA 430
++ ++P+IEHYGC+VDL R+G +++A + MPM+P+ SLL CRIH+N E+A
Sbjct: 367 VDYHLEPQIEHYGCLVDLLGRSGQVEQALDTILKMPMQPDSRTWNSLLSSCRIHHNLEIA 426
Query: 431 SQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQIN 490
VA + + +++PE++ Y+ L+AN+YA +W+ V+ VR+ + ++K PG S +++N
Sbjct: 427 V-VAMEQLLKLEPEESGNYV-LLANIYAKLDKWEGVSNVRKLIRSKRIKKTPGCSLIEVN 484
Query: 491 GVLHDFVAGDSTYKQASLIYKTLGEITMQAMQ 522
++ +FV+GD + + ++ L +T+ ++
Sbjct: 485 NLVQEFVSGDDSKPFSQEVFWILKGLTLHQIR 516
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 190/545 (34%), Positives = 304/545 (55%), Gaps = 29/545 (5%)
Query: 14 SSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV--TSGYLINA 71
S K + SLL T K + QIH+Q+++ G + + +A + L A
Sbjct: 3 SVKRIAKHPTISLLNSCTTLKEMKQIHAQLVVKGILNNPHFHGQFVATIALHNTTNLDYA 62
Query: 72 HKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMI---DKETEPDEYTYSFLLSVC 128
+K+ NP+ N MIR +++S TP KS + Y ++ + PD YT++FL+ C
Sbjct: 63 NKLLNHNNNPTLFTLNSMIRAYSKSSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTC 122
Query: 129 ARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVV 188
A+ G VHG V+ G+ + ++T L+ +Y G C C + FD +V
Sbjct: 123 AQLQAHVTGLCVHGAVIKHGFELDPHVQTGLVFMYAELG--CLSSCHNV-FDGAVEPDLV 179
Query: 189 SWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR 248
+ ++L K GDID A K+FDEMP R+ V+W MI+G AQ G+SR+AL +F+ M+
Sbjct: 180 TQTAMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEG 239
Query: 249 VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEI 308
V L++V++V LSAC + L G+W+H+YVE + + V+L AL+ MYA CG +
Sbjct: 240 VKLNEVSMVLVLSACTHLQVLDHGRWVHAYVERY----KVRMTVTLGTALVDMYAKCGNV 295
Query: 309 EEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSAC 353
+ A VF M+ RN +W+S I G A G+ +E+L +TF+ VL C
Sbjct: 296 DRAMQVFWGMKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGC 355
Query: 354 SHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAV 413
S G V+EGR+ F+ M +GI P++EHYG MVD++ RAG + EA + + +MPM+P+
Sbjct: 356 SVVGLVEEGRKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGA 415
Query: 414 LGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKM 473
+LL CR++ N EL ++AQ+ + E++ + Y+ L++N+YA K W+ V+++RQ M
Sbjct: 416 WSALLHACRMYKNKELG-EIAQRKIVELEDKNDGAYV-LLSNIYADYKNWESVSSLRQTM 473
Query: 474 IKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELF 533
GV+K PG S ++++G +H+F+ GD ++ + I L EI+ GY + + +
Sbjct: 474 KAKGVKKLPGCSVIEVDGEVHEFIVGDKSHPRYDEIEMKLEEISKCLRLSGYVANTNPVL 533
Query: 534 LGIEE 538
IEE
Sbjct: 534 FDIEE 538
>gi|147825156|emb|CAN75501.1| hypothetical protein VITISV_034156 [Vitis vinifera]
Length = 532
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 187/506 (36%), Positives = 289/506 (57%), Gaps = 31/506 (6%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKTENPSTAIWNQMIRGHAR 95
QI + I +G SQ + ++LL+F S G + +++++F + +P+ + WN +IRG ++
Sbjct: 23 QIQAFFITSGLSQHHPFASRLLSFSAISSWGDIDHSYRIFLQIPSPTISNWNSIIRGFSK 82
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
+ P SV ++ +M+ PD TY F+ AR R VH R+ G + FI
Sbjct: 83 GKNPNPSVSVFVKMLRFGVCPDHLTYPFVAKAVARLSELRLALAVHCRIAKEGLWFDRFI 142
Query: 156 RTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP 214
+L+++Y G CG +G AR +FD+M R+ VSWN++L GY K GD+D A ++F MP
Sbjct: 143 ANSLIHMY----GSCGDIGSARKVFDEMLIRNSVSWNAMLDGYAKCGDLDSAHQVFXSMP 198
Query: 215 HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKW 274
R+VVSW++MI GC + G+ AL++F MR + V +V+ L ACA +G L+ G+
Sbjct: 199 DRDVVSWSSMIDGCVKGGEYGVALAIFERMRVVGPKANXVTMVSVLCACAHLGALEXGRX 258
Query: 275 IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFR--KMQRRNTVSWTSMITG 332
+H Y+ +N + L +L+ MYA CG IEEA VFR M + + + W ++I G
Sbjct: 259 MHQYMVDN----TMRFTLVLRTSLMDMYAKCGAIEEAIAVFRGVPMDQTDVLMWNTIIGG 314
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
A G E+L +T+L + SAC+HGG V E FF+ + + G+ P
Sbjct: 315 LATHGLVXESLELFKEMQVLGIVPDEITYLCLFSACAHGGLVHEAWHFFKSLGKQ-GMVP 373
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
+ EHY CMVD+ SRAG + EA+ + MPM+P ++LG+LL GC H +LA +V +KL
Sbjct: 374 KSEHYACMVDVLSRAGQLAEAYDFIAQMPMEPTASMLGALLNGCMNHRRFDLAERVGRKL 433
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
+ E++P+ Y+ L +NVYA K W + +R+ M + GV+K PG S+V++ G LH F+
Sbjct: 434 I-ELEPDHDGRYIGL-SNVYAGVKLWDNARMMREAMERRGVKKSPGFSFVEVLGTLHRFI 491
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQE 523
A D T+ IY L I Q M +
Sbjct: 492 AHDKTHNDLEKIYMMLNTIVRQMMVD 517
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 198/574 (34%), Positives = 312/574 (54%), Gaps = 73/574 (12%)
Query: 25 SLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVT--SGYLINAHKVFEKTENPS 82
SLL+ + L QIHS I G S +++AF SG + AH+VF+ +PS
Sbjct: 12 SLLEKCKSMYQLKQIHSHTIKMGLSSDPLFRNRVIAFCCAHESGNMNYAHQVFDTIPHPS 71
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHG 142
IWN MI+G+++ PE V +Y M+ +PD +T+ F L R + G+++
Sbjct: 72 MFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKELLN 131
Query: 143 RVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGY--VKR 200
+ G+ SN+F++ ++++ + G V A +FD A VV+WN +L GY VK+
Sbjct: 132 HAVKHGFDSNLFVQKAFIHMFSLCGI---VDLAHKVFDMGDACEVVTWNIMLSGYNRVKQ 188
Query: 201 -----------------------------------------GDIDGAWKIFDEMPHRNVV 219
G++D A +FD M R+VV
Sbjct: 189 FKISKMLLVLSACSKLKDLEWGKHIFKYINGGIVEHMFAACGEMDEAQGVFDNMKTRDVV 248
Query: 220 SWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV 279
SWT MI G + AL+LF EM+ + V D+ +V+ L ACA +G L+LG+W+ + +
Sbjct: 249 SWTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSILIACALLGALELGEWVKTCI 308
Query: 280 EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYA 339
++N + V NAL+ MY CG + +A VF++M +++ +WT+MI G A G+
Sbjct: 309 DKNSNKNDSFV----GNALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMIVGLAINGHG 364
Query: 340 QEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGC 384
+EAL +T++GVL AC VD+G+ FF M GIKP + HYGC
Sbjct: 365 EEALAMFSNMIEASVTPDEITYIGVLCAC----MVDKGKSFFTNMTMQHGIKPTVTHYGC 420
Query: 385 MVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPE 444
MVDL G ++EA ++ NMP+KPN V GS L CR+H N +LA A++++ E++PE
Sbjct: 421 MVDLLGCVGCLEEALEVIVNMPVKPNSIVWGSPLGACRVHKNVQLADMAAKQIL-ELEPE 479
Query: 445 QAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYK 504
A Y+ L+ N+YAA+K+W+++ VR+ M++ G++K PG S +++NG +++FVAGD ++
Sbjct: 480 NGAVYV-LLCNIYAASKKWENLCQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHP 538
Query: 505 QASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
Q+ IY L + ++ GY PD SE+FL + E
Sbjct: 539 QSKEIYAKLENMMQGLIKAGYSPDTSEVFLDLGE 572
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 186/503 (36%), Positives = 287/503 (57%), Gaps = 36/503 (7%)
Query: 55 LAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKET 114
L KL Y + G L + +F +T+NPS W +I GHA E+++ Y QM+ +
Sbjct: 12 LDKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGV 71
Query: 115 EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGC 174
EP+ +T+S +L +C G+ +H + + G+ S++++RT L+++Y G V
Sbjct: 72 EPNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGD---VVS 124
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
A+ LFD MP +S+VS ++L Y K G++D A +FD M R+ V W MI G QNG
Sbjct: 125 AQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMP 184
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEEN---FSVGREPVL 291
+AL LF M +A+ ++V +++ LSAC ++G L+ G+W+HSY+E N F+
Sbjct: 185 NEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFN------- 237
Query: 292 VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------- 343
V + AL+ MY+ CG +E+A VF K+ ++ V+W SMI G+A G++QEAL
Sbjct: 238 VHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCR 297
Query: 344 -------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMD 396
+TF+G+LSAC H G+V EG F M +GI+P+IEHYGCMV+L RAG ++
Sbjct: 298 MGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVE 357
Query: 397 EAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQA-AGYLALVAN 455
+A+ LV+NM ++P+ + G+LL CR+H L ++ + LV D A +G L++N
Sbjct: 358 QAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLV---DQNLANSGTYILLSN 414
Query: 456 VYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGE 515
+YAA W VA +R M GV+K PG S +++N +H+F+AG + + IY L E
Sbjct: 415 IYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEE 474
Query: 516 ITMQAMQEGYKPDISELFLGIEE 538
I GY P + I E
Sbjct: 475 INGWLKSHGYTPQTDIVLHDIGE 497
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 142/325 (43%), Gaps = 71/325 (21%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPS----TAI--------- 85
+HSQ + GF Y+ LL Y G +++A ++F+ S TA+
Sbjct: 93 LHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGE 152
Query: 86 ------------------WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSV 127
WN MI G+ ++ P +++ L+++M+ + +P+E T +LS
Sbjct: 153 LDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSA 212
Query: 128 CARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARS 186
C + G G VH + +G NV + T L+++Y +CG + ARL+FD + +
Sbjct: 213 CGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMY----SKCGSLEDARLVFDKIDDKD 268
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
VV+WNS++ GY A G S++AL LF M R
Sbjct: 269 VVAWNSMIVGY-------------------------------AMXGFSQEALQLFKSMCR 297
Query: 247 ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCG 306
+ + + LSAC G + G I + +++ + G EP + ++++ G
Sbjct: 298 MGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEY--GIEPK-IEHYGCMVNLLGRAG 354
Query: 307 EIEEAYGVFRKMQ-RRNTVSWTSMI 330
+E+AY + + M + V W +++
Sbjct: 355 HVEQAYELVKNMNIEPDPVLWGTLL 379
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 111/263 (42%), Gaps = 49/263 (18%)
Query: 179 FDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQAL 238
+D + V + L + Y G +D + +F + +V WT +I G A G QAL
Sbjct: 1 MEDKKPPAXVPLDKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQAL 60
Query: 239 SLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS-----------YV-------- 279
+ + +M V + + L C ++ GK +HS YV
Sbjct: 61 NFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVY 116
Query: 280 ---------EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMI 330
++ F E LVSL A++ YA GE++ A +F M+ R+ V W MI
Sbjct: 117 ARGGDVVSAQQLFDTMPEKSLVSL-TAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMI 175
Query: 331 TGFAKQGYAQEALLTF---------------LGVLSACSHGGFVDEGRQFFECMNQNWGI 375
G+ + G EAL+ F L VLSAC G ++ GR + N GI
Sbjct: 176 DGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENN-GI 234
Query: 376 KPRIEHYGCMVDLFSRAGLMDEA 398
+ + +VD++S+ G +++A
Sbjct: 235 QFNVHVGTALVDMYSKCGSLEDA 257
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 199/558 (35%), Positives = 305/558 (54%), Gaps = 64/558 (11%)
Query: 34 KTLFQIHSQIIINGFSQKNYILA-KLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRG 92
KTL ++HS+I+IN + + LA KL+ Y G A +F+++ + +N MIR
Sbjct: 52 KTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRS 111
Query: 93 HARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSN 152
+ + +++ +++ M+ PD YT+ +L C+ R G QVH ++ G +N
Sbjct: 112 YVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTN 171
Query: 153 VFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKI-- 209
+FI L+ +Y G+CG + AR + D MP R VVSWNS++ GY + G D A +I
Sbjct: 172 LFIGNALVAMY----GKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICK 227
Query: 210 -----------------------------------FDEMPHRNVVSWTTMISGCAQNGKS 234
F+ M +N++SW MI+ N
Sbjct: 228 EMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMP 287
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
+A+SLF +M + D V + + L AC ++ L LG+ +H Y+E+ +P L+ L
Sbjct: 288 NEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKG---NLQPNLL-L 343
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK--QGYAQEAL--------- 343
NAL+ MYA CG +EEA VF KM+ R+ VSWTSM++ + + QGY AL
Sbjct: 344 ENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQ 403
Query: 344 ----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAF 399
+ F+ VLSACSH G +D+GR +F M + +GI PRIEH+ CMVDLF RAG ++EA+
Sbjct: 404 NPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAY 463
Query: 400 SLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAA 459
S ++ MPM+PN+ V G+LL CR+H+ ++ VA L+ ++ P+Q +GY L++N+YA
Sbjct: 464 SFIKQMPMEPNERVWGALLSACRVHSKMDIG-LVAADLLFQLAPKQ-SGYYVLLSNIYAK 521
Query: 460 AKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
A W+DV VR M K+G++K PG S V++NG +H F+AGD + QA IY L + +
Sbjct: 522 AGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGK 581
Query: 520 AMQEGYKPDISELFLGIE 537
+ GY P +E
Sbjct: 582 MKELGYIPQTESALHDVE 599
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 52/121 (42%), Gaps = 5/121 (4%)
Query: 23 IFSLLQIRNTTKTLF---QIHSQIIINGFSQKNYILAK-LLAFYVTSGYLINAHKVFEKT 78
I SLL LF ++H + I G Q N +L LL Y G L A VF+K
Sbjct: 309 IASLLPACGDLSALFLGRRLH-KYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKM 367
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE 138
W M+ + RS +V L+ +M+D PD + +LS C+ GL +G
Sbjct: 368 RLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGR 427
Query: 139 Q 139
Sbjct: 428 H 428
>gi|147791850|emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
Length = 688
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 199/572 (34%), Positives = 314/572 (54%), Gaps = 73/572 (12%)
Query: 31 NTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVT--SGYLINAHKVFEKTENPSTAIWNQ 88
++ + L +H+QII++G + + L KL++F +G L A ++F++ P+ ++N
Sbjct: 125 SSMRGLKLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNS 184
Query: 89 MIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASG 148
+IRG++ S+ P +V L+++MI P+E+T F+L C + E VHG + G
Sbjct: 185 LIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLG 244
Query: 149 YCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLK------------- 195
S VF++ L+ +Y++ G + CAR LFDD+ +++VSWNS+++
Sbjct: 245 IGSLVFVQNALIAVYVVCGL---IHCARKLFDDITDKTLVSWNSMIEITGVKIDIIVRNA 301
Query: 196 ----------------------------------GYVKRGDIDGAWKIFDEMPHRNVVSW 221
Y + G I+ A +IFD+MP +NVVSW
Sbjct: 302 LXDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSW 361
Query: 222 TTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE 281
+MIS + G+ R+AL LFN+MR +RV D+ LV+ L+AC+++GDL +GK IH+Y+
Sbjct: 362 NSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILS 421
Query: 282 NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQE 341
N + V+L N+LI MYA CG + A +F +M +N VSW +I A G E
Sbjct: 422 N----KGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLE 477
Query: 342 AL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMV 386
A+ +T G+LSACSH G VD G +F+ M + + IEHY CMV
Sbjct: 478 AIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVXREIEHYACMV 537
Query: 387 DLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQA 446
DL R GL+ EA L+ MPMKP+ V G+LL CRIH N E+ Q+ ++L+ E++P +
Sbjct: 538 DLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLL-ELEP-HS 595
Query: 447 AGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQA 506
G L++N+Y A+RW+DV +R+ MI G++K S ++I+G +++F+ D +K +
Sbjct: 596 GGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKKGRAISSIEIDGCIYEFMVDDKRHKIS 655
Query: 507 SLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
S IY L ++T GY +IS +F EE
Sbjct: 656 SSIYAMLDQLTDHLRSAGYLCNISSVFFEAEE 687
>gi|15241180|ref|NP_200442.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171630|sp|Q9FMA1.1|PP433_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g56310
gi|10177829|dbj|BAB11258.1| unnamed protein product [Arabidopsis thaliana]
gi|332009364|gb|AED96747.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 530
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 191/509 (37%), Positives = 299/509 (58%), Gaps = 29/509 (5%)
Query: 31 NTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMI 90
N KTL Q H +II G ++ N +AK + +G+L A+ VF P+T + N MI
Sbjct: 26 NNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMI 85
Query: 91 RGHARSETPEK---SVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLAS 147
R + + P ++ +Y+++ +PD +T+ F+L + R G Q+HG+V+
Sbjct: 86 RALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVF 145
Query: 148 GYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAW 207
G+ S+V + T L+ +Y GG +G AR +FD+M + V WN+LL GY K G++D A
Sbjct: 146 GFDSSVHVVTGLIQMYFSCGG---LGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEAR 202
Query: 208 KIFDEMPH--RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAE 265
+ + MP RN VSWT +ISG A++G++ +A+ +F M V D+V L+A LSACA+
Sbjct: 203 SLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACAD 262
Query: 266 IGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVS 325
+G L+LG+ I SYV+ + R VSLNNA+I MYA G I +A VF + RN V+
Sbjct: 263 LGSLELGERICSYVDHR-GMNRA---VSLNNAVIDMYAKSGNITKALDVFECVNERNVVT 318
Query: 326 WTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMN 370
WT++I G A G+ EAL +TF+ +LSACSH G+VD G++ F M
Sbjct: 319 WTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMR 378
Query: 371 QNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELA 430
+GI P IEHYGCM+DL RAG + EA ++++MP K N A+ GSLL +H++ EL
Sbjct: 379 SKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELG 438
Query: 431 SQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQIN 490
+ +L+ +++P + Y+ L+AN+Y+ RW + +R M +GV+K G+S +++
Sbjct: 439 ERALSELI-KLEPNNSGNYM-LLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVE 496
Query: 491 GVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
++ F++GD T+ Q I++ L E+ +Q
Sbjct: 497 NRVYKFISGDLTHPQVERIHEILQEMDLQ 525
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 187/527 (35%), Positives = 302/527 (57%), Gaps = 35/527 (6%)
Query: 10 NPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLI 69
+P + + I L ++R K ++ ++ +G Y+ L+ Y G +
Sbjct: 129 SPDNFTYPFVFKAIGCLGEVREGEK----VYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQ 184
Query: 70 NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKET-EPDEYTYSFLLSVC 128
N +VFE+ WN +I G+ + E +V ++++M + + P+E T LS C
Sbjct: 185 NLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSAC 244
Query: 129 ARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSV 187
+ G+++H R + + I L+++Y +CG + AR +F+DMP ++V
Sbjct: 245 IALKMLELGKEIH-RYVREQLGFTIKIGNALVDMYC----KCGHLSIAREIFNDMPIKTV 299
Query: 188 VSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRA 247
+ W S++ GYV G +D A ++F+ P R+VV WT MI+G Q + A++LF EM+
Sbjct: 300 ICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIK 359
Query: 248 RVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGE 307
RV D+ LVA L+ CA++G L+ GKWIH Y++EN + + + ALI MYA CG
Sbjct: 360 RVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDEN----KIMIDAVVGTALIEMYAKCGF 415
Query: 308 IEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSA 352
IE++ +F ++ ++T SWTS+I G A G +AL +TF+GVLSA
Sbjct: 416 IEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSA 475
Query: 353 CSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDA 412
CSHGG V+EGR+ F M + I+P++EHYGC++DL RAG +DEA L++ P N+
Sbjct: 476 CSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEV 535
Query: 413 VL---GSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAV 469
++ G+LL CR H N E+ +VA++LV I+ ++ + L+AN+YA+A RW+DV V
Sbjct: 536 IVPLYGALLSACRTHGNVEMGERVAKRLVG-IESGDSSVH-TLLANIYASADRWEDVTKV 593
Query: 470 RQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEI 516
R+KM +GV+K PG S V++NG++H+F+ GD+++ + IY L I
Sbjct: 594 RRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLDSI 640
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 190/419 (45%), Gaps = 69/419 (16%)
Query: 8 PANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV--TS 65
P + +TSS T + LL+ + + L QI +QI+ GF Q L K + +
Sbjct: 21 PLHLSTSSH-FTKKSCIFLLKNCKSMQHLKQIQTQILRTGFHQSGDTLNKFMVCCTDPSI 79
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
G L A ++F + P I+N +I+ ++ + K+V L++Q+ ++ PD +TY F+
Sbjct: 80 GNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVF 139
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPAR 185
G REGE+V+G V+ SG + ++ +LM++Y G V R +F++MP R
Sbjct: 140 KAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVG---RVQNLRQVFEEMPQR 196
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
VVSWN L+ GYVK + A +F M +
Sbjct: 197 DVVSWNVLISGYVKCRRYEDAVDVFRRM------------------------------QQ 226
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC 305
++ + ++ +V+ LSAC + L+LGK IH YV E + + NAL+ MY C
Sbjct: 227 QSSLRPNEATVVSTLSACIALKMLELGKEIHRYVREQLG-----FTIKIGNALVDMYCKC 281
Query: 306 GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQF 365
G + A +F M + + WTSM++G+ G +DE R+
Sbjct: 282 GHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQ--------------------LDEAREL 321
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK---PNDAVLGSLLLGC 421
FE + + M++ + + D+A +L + M +K P+ L +LL GC
Sbjct: 322 FE-----RSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGC 375
>gi|296082942|emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 188/493 (38%), Positives = 274/493 (55%), Gaps = 54/493 (10%)
Query: 43 IIINGFSQKNYILAKLL--AFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPE 100
+I+ GF+ L +L+ + SG + AH++F P T +WN MIRG A+S +P
Sbjct: 1 MIVKGFNSNTSALRELIYASSIAISGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPL 60
Query: 101 KSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLM 160
++ LY QM + PD++T+ F+L C R + G VHGRV G+ SN F+R L+
Sbjct: 61 NAISLYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLI 120
Query: 161 NLYLMSG------------------------------GECGVGCARLLFDDMPARSVVSW 190
+ G GE GV AR LFD+MP + +VSW
Sbjct: 121 YFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGV--ARQLFDEMPVKDLVSW 178
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG 250
N ++ GY KRG+++ A K+FDE+P R+VV+W MI+G G ++QAL +F EMR
Sbjct: 179 NVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGEL 238
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEE 310
D+V +++ LSAC ++GDL G+ IH + E +G + V L NALI MYA CG I
Sbjct: 239 PDEVTMLSLLSACTDLGDLDAGQRIHCCISE---MGFRDLSVLLGNALIDMYAKCGSIVR 295
Query: 311 AYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSH 355
A VF+ M+ ++ +W S++ G A G+A++++ +TF+GVL ACSH
Sbjct: 296 ALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSH 355
Query: 356 GGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLG 415
G V+EGRQ+F+ M + I+P I HYGCMVDL RAGL++EAF + M ++PN V
Sbjct: 356 AGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWR 415
Query: 416 SLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIK 475
+LL CRIH N EL + +L+ E +G L++N+YA+ W V VR+ M
Sbjct: 416 TLLGACRIHGNVELGRRANMQLLKMRHDE--SGDYVLLSNIYASRGEWDGVEKVRKLMDD 473
Query: 476 MGVRKPPGQSWVQ 488
GVRK G S ++
Sbjct: 474 SGVRKEAGCSLIE 486
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 178/499 (35%), Positives = 291/499 (58%), Gaps = 32/499 (6%)
Query: 41 SQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPE 100
+ ++ G +++ F G + +A ++F+++ WN +I G+ R P
Sbjct: 149 AHVLRLGLDSDVFVVNAATHFLSIRGPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPA 208
Query: 101 KSVYLYKQMI--DKETEPDEYTYSFLLSVCARCGLFRE---GEQVHGRVLASGYCSNVFI 155
+++ L+ +M+ D PDE T +++ + CG R+ G ++HG V + G V +
Sbjct: 209 EALELFWRMVAEDAVVRPDEVT---MIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRL 265
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
LM++Y+ G + A+ +F+ + R+VVSW +++ G+ K G +D A K+FDEMP
Sbjct: 266 MNALMDMYIKCGS---LEMAKSVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPE 322
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
R+V W +++G Q + ++ALSLF+EM+ A V D++ +V L+AC+++G L++G W+
Sbjct: 323 RDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWV 382
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
H Y+E++ R V+L +LI MYA CG IE+A +F+++ +N ++WT+MI G A
Sbjct: 383 HRYIEKH----RLVFSVALGTSLIDMYAKCGNIEKAIHIFKEIPEKNALTWTAMICGLAN 438
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
G+A EA+ +TF+GVLSAC H G V EGR+FF M + ++ +++
Sbjct: 439 HGHANEAIEHFRTMIELGQKPDEITFIGVLSACCHAGLVKEGREFFSLMETKYHLERKMK 498
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HY CM+DL RAG +DEA LV MPM+P+ V G++ CR+ N L + A KLV E
Sbjct: 499 HYSCMIDLLGRAGHLDEAEQLVNTMPMEPDAVVWGAIFFACRMQGNISLGEKAAMKLV-E 557
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
IDP + Y+ L+AN+YA A + VR M +GV K PG S +++NGV+H+F+ D
Sbjct: 558 IDPSDSGIYV-LLANMYAEANMRKKADKVRAMMRHLGVEKVPGCSCIELNGVVHEFIVKD 616
Query: 501 STYKQASLIYKTLGEITMQ 519
++ + IY L EIT+Q
Sbjct: 617 KSHMDSHAIYDCLHEITLQ 635
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 134/275 (48%), Gaps = 46/275 (16%)
Query: 81 PSTAIWNQMIRGHARSETPEKSVY--------LYKQMIDKET-EPDEYTYSFLLSVCARC 131
P++A +N IR + S+ ++ + LY+ ++ T PD T+ FLL CAR
Sbjct: 80 PASA-YNAAIRALSLSDDGDRHGHGVVRRCLPLYRALLRSGTARPDHLTFPFLLKACARL 138
Query: 132 GLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWN 191
+ G+ VL G S+VF+ N +L G + AR LFD P R +VSWN
Sbjct: 139 REWGYGDAALAHVLRLGLDSDVFV-VNAATHFLSIRGP--MEDARRLFDRSPVRDLVSWN 195
Query: 192 SLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL 251
+L+ GYV+RG+ A ++F M + V V
Sbjct: 196 TLIGGYVRRGNPAEALELFWRMVAEDAV-----------------------------VRP 226
Query: 252 DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEA 311
D+V ++AA+S C ++ DL+LG+ +H +V+ + V L NAL+ MY CG +E A
Sbjct: 227 DEVTMIAAVSGCGQMRDLELGRRLHGFVDSDGV----SCTVRLMNALMDMYIKCGSLEMA 282
Query: 312 YGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
VF +++ R VSWT+MI GFAK G +A F
Sbjct: 283 KSVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVF 317
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 132/333 (39%), Gaps = 71/333 (21%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHAR-- 95
++H + +G S ++ L+ Y+ G L A VFE+ E+ + W MI G A+
Sbjct: 249 RLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMIVGFAKFG 308
Query: 96 ---------SETPEKSVY--------------------LYKQMIDKETEPDEYTYSFLLS 126
E PE+ V+ L+ +M + PDE T LL+
Sbjct: 309 LMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLT 368
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPAR 185
C++ G G VH + +V + T+L+++Y +CG + A +F ++P +
Sbjct: 369 ACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMY----AKCGNIEKAIHIFKEIPEK 424
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
+ ++W T MI G A +G + +A+ F M
Sbjct: 425 NALTW-------------------------------TAMICGLANHGHANEAIEHFRTMI 453
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC 305
D++ + LSAC G +K G+ S +E + + R+ + + +I +
Sbjct: 454 ELGQKPDEITFIGVLSACCHAGLVKEGREFFSLMETKYHLERK---MKHYSCMIDLLGRA 510
Query: 306 GEIEEAYGVFRKM-QRRNTVSWTSMITGFAKQG 337
G ++EA + M + V W ++ QG
Sbjct: 511 GHLDEAEQLVNTMPMEPDAVVWGAIFFACRMQG 543
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 183/526 (34%), Positives = 297/526 (56%), Gaps = 29/526 (5%)
Query: 32 TTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSG--YLINAHKVFEKTENPSTAIWNQM 89
T K L QIH+Q++ING +L + +A L+ ++++ ++ P+ N M
Sbjct: 21 TLKELKQIHTQLVINGLLNNRELLGQFVASIAVRNPTNLLYSNQILDQCAKPTLFALNSM 80
Query: 90 IRGHARSETPEKSVYLYKQMIDKET--EPDEYTYSFLLSVCARCGLFREGEQVHGRVLAS 147
IR +++S TP KS Y +++ PD YT++FL+ CA+ G VHG ++
Sbjct: 81 IRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLVRTCAQSAC-EAGPAVHGALIKH 139
Query: 148 GYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAW 207
G+ + + + L+ +Y + C C R+ F+ + +V +++ K GDI A
Sbjct: 140 GFEYDPHVESGLIFMY--AEMSCLSSCHRV-FESVQKPDLVCQTTMVSACAKCGDIGFAR 196
Query: 208 KIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIG 267
+FD MP R+ VSW MI+G AQ G+SR+AL+LF M+ V +++V++++ ++AC +G
Sbjct: 197 NLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGVKVNEVSMISVVTACTHLG 256
Query: 268 DLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
L GKW H+Y+E+N + + V+L AL+ MY CG ++ A VF +M +N +W+
Sbjct: 257 ALDQGKWAHAYIEKN----KIQMTVNLGTALVDMYFKCGNVDRALKVFWEMNEKNVYTWS 312
Query: 328 SMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQN 372
+ I G A GY Q+ L +TF+ VL CS GFVDEGR F+ M ++
Sbjct: 313 TAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRD 372
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQ 432
GI+PR+EHYGCMVDL+ RAG ++EA + + MP+KP+ G+LL CR++ N EL
Sbjct: 373 HGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNMELGEF 432
Query: 433 VAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGV 492
++KL+ E++ + Y++L +N+YA W V+ VRQ M G+ K PG S +++NG
Sbjct: 433 ASRKLI-EVEGKNHGAYVSL-SNIYADTGNWDRVSNVRQSMKAEGISKLPGCSVMEVNGE 490
Query: 493 LHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+H+F +GD ++ +I GEI+ + GY + + IEE
Sbjct: 491 VHEFFSGDKSHPSYDVIETMWGEISKRLKLAGYVASTNSVLFDIEE 536
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 199/558 (35%), Positives = 304/558 (54%), Gaps = 64/558 (11%)
Query: 34 KTLFQIHSQIIINGFSQKNYILA-KLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRG 92
KTL ++HS+I+IN + + LA KL+ Y G A +F+++ + +N MIR
Sbjct: 52 KTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRS 111
Query: 93 HARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSN 152
+ + +++ +++ M+ PD YT+ +L C+ R G QVH ++ G +N
Sbjct: 112 YVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTN 171
Query: 153 VFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKI-- 209
+FI L+ +Y G+CG + AR + D MP R VVSWNS++ GY + G D A +I
Sbjct: 172 LFIGNALVAMY----GKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICK 227
Query: 210 -----------------------------------FDEMPHRNVVSWTTMISGCAQNGKS 234
F+ M +N++SW MI+ N
Sbjct: 228 EMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMP 287
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
+A+SLF +M + D V + + L AC ++ L LG+ +H Y+E+ P L+ L
Sbjct: 288 NEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKG---NLRPNLL-L 343
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK--QGYAQEAL--------- 343
NAL+ MYA CG +EEA VF KM+ R+ VSWTSM++ + + QGY AL
Sbjct: 344 ENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQ 403
Query: 344 ----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAF 399
+ F+ VLSACSH G +D+GR +F M + +GI PRIEH+ CMVDLF RAG ++EA+
Sbjct: 404 NPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAY 463
Query: 400 SLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAA 459
S ++ MPM+PN+ V G+LL CR+H+ ++ VA L+ ++ P+Q +GY L++N+YA
Sbjct: 464 SFIKQMPMEPNERVWGALLSACRVHSKMDIG-LVAADLLFQLAPKQ-SGYYVLLSNIYAK 521
Query: 460 AKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
A W+DV VR M K+G++K PG S V++NG +H F+AGD + QA IY L + +
Sbjct: 522 AGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGK 581
Query: 520 AMQEGYKPDISELFLGIE 537
+ GY P +E
Sbjct: 582 MKELGYIPQTESALHDVE 599
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 180/515 (34%), Positives = 293/515 (56%), Gaps = 25/515 (4%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
H +I +IL L+ FY G L ++VF WN MI + P
Sbjct: 159 HGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCP 218
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
E+++ L+++M + +P+ T +LS CA+ F G VH + + ++ + +
Sbjct: 219 EEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAM 278
Query: 160 MNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVV 219
+++Y G V A+ LFD MP + +VSW ++L GY K G+ D A IFD MP++++
Sbjct: 279 LDMYTKCGS---VEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIA 335
Query: 220 SWTTMISGCAQNGKSRQALSLFNEMRRARVG-LDQVALVAALSACAEIGDLKLGKWIHSY 278
+W +IS Q GK ++AL LF+E++ ++ D+V LV+ LSACA++G + LG WIH Y
Sbjct: 336 AWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVY 395
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+++ G + + L +LI MY CG++++A VF ++R++ W++MI G A G+
Sbjct: 396 IKKQ---GMK-LNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGH 451
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
++A+ +TF +L ACSH G V+EGR FF M +G+ P ++HY
Sbjct: 452 GKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYA 511
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
CMVD+ RAGL++EA L++ MPM P +V G+LL C IH N LA Q +L+ E++P
Sbjct: 512 CMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLI-ELEP 570
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
Y+ L++N+YA A +W V+ +R+ M +G++K PG S ++++G++H+F+ GD+++
Sbjct: 571 GNHGAYV-LLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSH 629
Query: 504 KQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
A IY L EI + GY P+ S L +EE
Sbjct: 630 PSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEE 664
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 200/420 (47%), Gaps = 80/420 (19%)
Query: 14 SSKALTTRQIFSLLQIRNTTKTLFQIHSQIIING-----FSQKNYILAKLLAFYVTSGYL 68
+ + SL+ + TK L QIH+Q++ G FS I A L+ + + Y
Sbjct: 29 NDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDY- 87
Query: 69 INAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETE-PDEYTYSFLLSV 127
A +VF++ +P+ WN +IR +A S P +S+ ++ +M+ + + PD++T+ FL+
Sbjct: 88 --AQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKA 145
Query: 128 CARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARS 186
+ G+ HG V+ S+VFI +L++ Y +CG +G +F ++P R
Sbjct: 146 ASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFY----AKCGELGLGYRVFVNIPRRD 201
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
VVSWNS++ +V+ G + A ++F EM +NV NG
Sbjct: 202 VVSWNSMITAFVQGGCPEEALELFQEMETQNV----------KPNG-------------- 237
Query: 247 ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCG 306
+ +V LSACA+ D + G+W+HSY+E N +G ++L+NA++ MY CG
Sbjct: 238 -------ITMVGVLSACAKKSDFEFGRWVHSYIERN-RIGES---LTLSNAMLDMYTKCG 286
Query: 307 EIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFF 366
+E+A +F KM ++ VSWT+M+ G+AK G D + F
Sbjct: 287 SVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGE--------------------YDAAQGIF 326
Query: 367 ECM-NQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM----KPNDAVLGSLLLGC 421
+ M NQ+ I + ++ + + G EA L + + KP++ L S L C
Sbjct: 327 DAMPNQD------IAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSAC 380
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 204/603 (33%), Positives = 309/603 (51%), Gaps = 86/603 (14%)
Query: 5 EIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVT 64
EI P + L R I SLLQ T+K + QI +QII NGF YI KL+ T
Sbjct: 24 EIDYLAPKPPHRLLEERFI-SLLQSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICAT 82
Query: 65 SGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFL 124
+ A ++F++ +P+ A+WN M RG+A+SE+ + V+L+ QM + P+ +T+ +
Sbjct: 83 LKRMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVV 142
Query: 125 LSVCARCGLFREGEQVHGRVLASGY---------------------------CS----NV 153
L C + EGEQVH ++ G+ C NV
Sbjct: 143 LKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNV 202
Query: 154 FIRTNLMNLYLMS------------------------------GGECGVGCARLLFDDMP 183
T+++N Y++S GG+ + AR LF +MP
Sbjct: 203 VAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGD--MVEARKLFHEMP 260
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
R V+ WN++LKGY G+++ +F+EMP RN+ SW +I G A NG + L F
Sbjct: 261 NRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKR 320
Query: 244 M-RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMY 302
M + V + LV LSACA +G L LGKW+H Y E + G V + NAL+ MY
Sbjct: 321 MLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGN----VYVGNALMDMY 376
Query: 303 ASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFL 347
A CG IE A VFR M ++ +SW ++I G A +AL +TF+
Sbjct: 377 AKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFI 436
Query: 348 GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM 407
G+L AC+H G V++G +F+ M ++ I P+IEHYGCMVD+ +RAG +++A + V+ MP+
Sbjct: 437 GILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPV 496
Query: 408 KPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVA 467
+ + + LL CRI+ N ELA Q+L+ E++P+ A Y+ L +N+Y A RW+DVA
Sbjct: 497 EADGVIWAGLLGACRIYKNVELAELALQRLI-ELEPKNPANYVML-SNIYGDAGRWEDVA 554
Query: 468 AVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
++ M G +K PG S +++N + +F + D + Q IY L + GY P
Sbjct: 555 RLKVAMRDTGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLVKVLRSFGYVP 614
Query: 528 DIS 530
D++
Sbjct: 615 DLT 617
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 53/137 (38%), Gaps = 6/137 (4%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
ML E +P N AT L+ L + +H +G Y+ L+
Sbjct: 321 MLSESDVPPNDATLVTVLSACARLGALDLGK------WVHVYAESSGLKGNVYVGNALMD 374
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y G + NA VF + WN +I G A ++ L+ QM + +PD T
Sbjct: 375 MYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGIT 434
Query: 121 YSFLLSVCARCGLFREG 137
+ +L C GL +G
Sbjct: 435 FIGILCACTHMGLVEDG 451
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 187/517 (36%), Positives = 291/517 (56%), Gaps = 56/517 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH GF+ Y L+ Y G L++A KVF+K E+ + W MI HA+ +
Sbjct: 106 QIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWD 165
Query: 98 TPEKSVYLYKQMIDKET-EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
P ++V L+ +M+ E +P+E T +L+ CAR +++H + G+ +V +
Sbjct: 166 QPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLN 225
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
T LM++Y C GC +L D +FD+ +
Sbjct: 226 TVLMDVY------CKCGCVQLARD----------------------------LFDKAQEK 251
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
N+ SW MI+G ++ +AL LF EM+ + D+V + + L AC +G L+LGKW+H
Sbjct: 252 NLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLH 311
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+Y+++ R V V+L AL+ MYA CG IE A VF +M ++ ++WT++I G A
Sbjct: 312 AYIKKQ----RIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMC 367
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G A+ AL +TF+GVL+ACSH GFVDEG F M+ +GI+P IEH
Sbjct: 368 GQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEH 427
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YG +VD+ RAG + EA L+++MPM P+ VLG LL CRIH N E A + A++L+ EI
Sbjct: 428 YGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQLL-EI 486
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
DP + Y+ L++N+Y ++K+W++ R+ M + G+RKPPG S ++++GV+H+FV GDS
Sbjct: 487 DPYHSGTYV-LLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEFVKGDS 545
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+++Q+S I + L ++ + GY PD SE+ + E
Sbjct: 546 SHRQSSEINEMLEDMISKLKNAGYVPDKSEVLFDMAE 582
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 191/415 (46%), Gaps = 61/415 (14%)
Query: 36 LFQIHSQIIINGFSQKNYILAKLLAF--YVTSGYLINAHKVFEKTENPSTAIWNQMIRGH 93
L QIH+Q++ G + +K++AF SG L A VF + NP++ N +IRG
Sbjct: 4 LKQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGC 63
Query: 94 ARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNV 153
++++ Y++M+ + PD YT+ L C EG+Q+H G+ S+
Sbjct: 64 TDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSS---EGKQIHCHSTKLGFASDT 120
Query: 154 FIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
+ + LMN+Y G C V AR +FD M ++VVSW
Sbjct: 121 YAQNTLMNMYSNCG--CLVS-ARKVFDKMEDKTVVSW----------------------- 154
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR-VGLDQVALVAALSACAEIGDLKLG 272
TMI AQ + +A+ LF+ M ++ V ++V LV L+ACA DL +
Sbjct: 155 --------ATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMV 206
Query: 273 KWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
K IH Y++E+ GR V LN L+ +Y CG ++ A +F K Q +N SW MI G
Sbjct: 207 KRIHEYIDEH-GFGRH---VVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMING 262
Query: 333 FAKQGYAQEALLTF---------------LGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
+ +EALL F +L AC+H G ++ G+ + + I
Sbjct: 263 HVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGK-WLHAYIKKQRIDV 321
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQ 432
+ +VD++++ G ++ A + MP K + +L+LG + AE A Q
Sbjct: 322 DVALGTALVDMYAKCGSIETAIQVFHEMPEK-DVMTWTALILGLAMCGQAENALQ 375
>gi|147819809|emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
Length = 1033
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 204/580 (35%), Positives = 325/580 (56%), Gaps = 71/580 (12%)
Query: 17 ALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY---LINAHK 73
A++T + S+L + L QIH+Q+I + +++L+AF SG L A
Sbjct: 3 AISTNPVVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASS 62
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMID--KETEPDEYTYSFLLSVCARC 131
VF + ++P++ I+ +I+G + + P +S+ LY +M+ + E++ +L C +
Sbjct: 63 VFSRIQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKL 122
Query: 132 GLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWN 191
F EG QVHG+VL + + F+ +++ +Y+ G + AR +FD MP R VVSWN
Sbjct: 123 LAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGE---IELARRVFDRMPNRDVVSWN 179
Query: 192 SLLKGYVKRGDIDGAWKIFDEMPHRN-------------------------------VVS 220
S++ GY+K G+I+ A ++FDEMP R+ VV+
Sbjct: 180 SMIAGYLKAGEIELASELFDEMPERDLVSCNAMIDGYGKCGRCELAEKVFETMSDKDVVT 239
Query: 221 WTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVE 280
WT+MIS QN +AL LF EM + D A+V+ LSA A++G ++ GKW+H+YV
Sbjct: 240 WTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVS 299
Query: 281 EN---FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAKQ 336
N S G + +ALI MY+ CG IE AY VFR + RRN W SMI+G A
Sbjct: 300 MNKIELSSG------FIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIH 353
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G A+EAL +TFLG+LS CSHGG V+EG+ +FE M++ + I PRI+H
Sbjct: 354 GLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQH 413
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YGCM+DLF RAG +++A ++QNMP + + ++L H + E+ A + + E+
Sbjct: 414 YGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRAI-EL 472
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG-- 499
P+ ++ Y+ L++N+YA A RW DVA +R M + GV+K G S + +BG +H+F+ G
Sbjct: 473 APDDSSSYV-LLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVBGKVHEFLXGKE 531
Query: 500 -DSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
DS+Y + + + E+ + +GY+PD++++ L IE+
Sbjct: 532 LDSSY--SGQVLAKIAEVVSRLKLQGYEPDLTQVLLDIED 569
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 185/541 (34%), Positives = 309/541 (57%), Gaps = 36/541 (6%)
Query: 24 FSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA---------FYVTSGYLINAHKV 74
+LLQ ++ L IH ++ ++ ++LLA F+ + L A+ +
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALALCVDDSTFHKPTNLLGYAYGI 75
Query: 75 FEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLF 134
F + +NP+ ++N +IR + P K+ Y QM+ PD T+ FL+
Sbjct: 76 FSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASTEMECV 135
Query: 135 REGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSL 193
GEQ H +++ G+ ++V++ +L+++Y CG + A +F MP R VVSW S+
Sbjct: 136 VVGEQTHSQIVRFGFQNDVYVENSLVHMY----ANCGLIAAAGRIFGQMPFRDVVSWTSM 191
Query: 194 LKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQ 253
+ GY K G ++ A ++FDEMPHRN+ +W+ MI+G A+N +A+ LF M+R V ++
Sbjct: 192 VAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANE 251
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
+V+ +S+CA +G L+ G+ H YV ++ V + L AL+ MY CGEIE+A
Sbjct: 252 TVMVSVISSCAHLGALEFGERAHEYVVKSHMT----VNLILGTALVDMYWRCGEIEKAIR 307
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGF 358
VF ++ ++++SW+S+I G A G+A +A+ +T VLSACSHGG
Sbjct: 308 VFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGL 367
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLL 418
VD+G + +E M +++GI+PR+EHYGC+VD+ RAG + EA + + MP+KPN +LG+LL
Sbjct: 368 VDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGALL 427
Query: 419 LGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
C+I+ N E+A +V L+ E+ PE +GY L++N+YA A +W+ + ++R M + V
Sbjct: 428 GACKIYKNTEVAERVGNMLI-EVKPEH-SGYYVLLSNIYACAGQWEKLESLRDIMKEKLV 485
Query: 479 RKPPGQSWVQINGVLHDFVAGDS-TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIE 537
+KPPG S ++I+G ++ F GD + + I + EI + GYK + + F ++
Sbjct: 486 KKPPGWSLIEIDGKINKFSMGDDQKHPEMGKIKRLWEEILGKIRLIGYKGNTGDAFFDVD 545
Query: 538 E 538
E
Sbjct: 546 E 546
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 207/610 (33%), Positives = 321/610 (52%), Gaps = 94/610 (15%)
Query: 10 NPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIIN---GFSQKNYILAKLLAFYVTSG 66
NP T+ + QI SL T + L Q+H+QII + F L+ + T
Sbjct: 88 NPLTNPP--SNPQILSLFNPCKTLRHLKQVHAQIITHHNSPFQLSALASLSALSPFPT-- 143
Query: 67 YLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEP---------- 116
+L A +F +NP +++N +IR + S+TP +++ LY M+ +P
Sbjct: 144 FLAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIK 203
Query: 117 -------------------------DEYTYSFLLSVCAR-------------C------- 131
D Y S L+ + A C
Sbjct: 204 ACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVS 263
Query: 132 ------GLFREGEQVHGR-VLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPA 184
G + E H R V C +V ++N Y + G + A+ LFD+MP
Sbjct: 264 WNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAIVGK---IDEAKRLFDEMPE 320
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
R++VSWNS+L G+VK G+++ A+ +F EMP R+VVSW +M++ AQ GK +AL+LF++M
Sbjct: 321 RNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQM 380
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYAS 304
R V + +V+ LSACA +G L G +H+Y+ +N R V + AL+ MYA
Sbjct: 381 RAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDN----RIEVNSIVGTALVDMYAK 436
Query: 305 CGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGV 349
CG+I A VF M+ ++ ++W ++I G A G +EA +TF+ +
Sbjct: 437 CGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAI 496
Query: 350 LSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKP 409
LSACSH G VDEG++ +CM+ ++GI+P++EHYGC++DL +RAG ++EA L+ MPM+P
Sbjct: 497 LSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEP 556
Query: 410 NDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAV 469
N + LG+LL GCRIH N EL V ++L+ + P + Y+ L++N+YAAAK+W D V
Sbjct: 557 NPSALGALLGGCRIHGNFELGEMVGKRLI-NLQPCHSGRYI-LLSNIYAAAKKWDDARKV 614
Query: 470 RQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQE-GYKPD 528
R M G+ K PG S +++ G++H FVAGD ++ +++ IY+ L EI + GY D
Sbjct: 615 RNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSAD 674
Query: 529 ISELFLGIEE 538
+ L +EE
Sbjct: 675 TGNVLLDMEE 684
>gi|115479117|ref|NP_001063152.1| Os09g0411600 [Oryza sativa Japonica Group]
gi|50252330|dbj|BAD28363.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113631385|dbj|BAF25066.1| Os09g0411600 [Oryza sativa Japonica Group]
Length = 548
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 198/485 (40%), Positives = 299/485 (61%), Gaps = 37/485 (7%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVF-----------EKTENPS 82
+ L Q+H+Q+++NGF +K ++LAKLL+ + L A +F + P+
Sbjct: 62 RALDQLHAQVVLNGFPRKRFLLAKLLSLAAAAADLPRAESLFLAAPAAECSSSTSSSTPT 121
Query: 83 TAIWNQMIRGHARSETP-EKSVYLYKQMIDKET-EPDEYTYSFLLSVCARCGLFR--EGE 138
A N ++R A S P ++ V L+ +++ + P+ +++S LL+ A G G
Sbjct: 122 LA--NLVLRAAASSRAPPDRLVALFSRLVSRHGFRPNAFSFSTLLAALADAGAAALPHGR 179
Query: 139 QVHGRVLASGYC-SNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGY 197
+H R LA G S+ + T+L++LY +G +G AR +FD+MP R+V +WN +L Y
Sbjct: 180 ALHARALACGLVLSSGHVLTSLLDLYAAAGQ---LGEARRVFDEMPGRTVAAWNCMLAAY 236
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
V+ ++D A F+EMP R+ V+WTTMI+GC GK+ +A+ LF MR+A +D V +V
Sbjct: 237 VRCCEMDAALWFFNEMPGRDSVAWTTMIAGCVNAGKAAEAVELFWRMRKANAKVDAVTMV 296
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
A L+ACAE GDL+LG+W+H++VE+ GR+ V L+NALI+MY CG +E+A+ +F
Sbjct: 297 ALLTACAEQGDLRLGRWVHAHVEQE---GRQWRTVLLDNALINMYVKCGAVEDAHRLFLV 353
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEAL------------LTFLGVLSACSHGGFVDEGRQF 365
M RR+TVSWT+MI+G A G A+EAL T L VL ACS+ G VD+GRQ+
Sbjct: 354 MPRRSTVSWTTMISGLAIHGRAEEALDLFHRMQERPDGATLLAVLLACSNAGRVDDGRQY 413
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHN 425
F+ M + +GI P I+HYGCMVD+ + EA V+ M ++PNDAVLG+LL GC+
Sbjct: 414 FQSMERFYGITPGIQHYGCMVDMLCHGKQLREAIEFVETMHLQPNDAVLGALLSGCKREG 473
Query: 426 NAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQS 485
N ELA+QV ++L+ + PE+AAG+L L+AN+YA +W+ VR+++ + KP G S
Sbjct: 474 NLELAAQVIERLI-RLQPERAAGHLVLLANMYAGVGQWEQAGKVRERVAALNAGKPAGTS 532
Query: 486 WVQIN 490
V N
Sbjct: 533 RVNPN 537
>gi|125563696|gb|EAZ09076.1| hypothetical protein OsI_31338 [Oryza sativa Indica Group]
Length = 548
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 198/485 (40%), Positives = 299/485 (61%), Gaps = 37/485 (7%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVF-----------EKTENPS 82
+ L Q+H+Q+++NGF +K ++LAKLL+ + L A +F + P+
Sbjct: 62 RALDQLHAQVVLNGFPRKRFLLAKLLSLAAAAADLPRAESLFLAAPAAECSSSTSSSTPT 121
Query: 83 TAIWNQMIRGHARSETP-EKSVYLYKQMIDKET-EPDEYTYSFLLSVCARCGLFR--EGE 138
A N ++R A S P ++ V L+ +++ + P+ +++S LL+ A G G
Sbjct: 122 LA--NLVLRAAASSRAPPDRLVALFSRLVSRHGFRPNAFSFSTLLAALADAGAAALPHGR 179
Query: 139 QVHGRVLASGYC-SNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGY 197
+H R LA G S+ + T+L++LY +G +G AR +FD+MP R+V +WN +L Y
Sbjct: 180 ALHARALACGLVLSSGHVLTSLLDLYAAAGQ---LGEARRVFDEMPGRTVAAWNCMLAAY 236
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
V+ ++D A F+EMP R+ V+WTTMI+GC G++ +A+ LF MR+A +D V +V
Sbjct: 237 VRCCEMDAALWFFNEMPGRDSVAWTTMIAGCVNAGRAAEAVELFWRMRKANAKVDAVTMV 296
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
A L+ACAE GDL+LG+W+H++VE+ GR+ V L+NALI+MY CG +E+A+ +F
Sbjct: 297 ALLTACAEQGDLRLGRWVHAHVEQE---GRQWRTVLLDNALINMYVKCGAVEDAHRLFLV 353
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEAL------------LTFLGVLSACSHGGFVDEGRQF 365
M RR+TVSWT+MI+G A G A+EAL T L VL ACS+ G VD+GRQ+
Sbjct: 354 MPRRSTVSWTTMISGLAIHGRAEEALDLFHRMQERPDGATLLAVLLACSNAGRVDDGRQY 413
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHN 425
F+ M + +GI P I+HYGCMVD+ + EA V+ M ++PNDAVLG+LL GC+
Sbjct: 414 FQSMERFYGITPGIQHYGCMVDMLCHGKQLREAIEFVETMHLQPNDAVLGALLSGCKREG 473
Query: 426 NAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQS 485
N ELA+QV +KL+ + PE+AAG+L L+AN+YA +W+ VR+++ + KP G S
Sbjct: 474 NLELAAQVIEKLI-RLQPERAAGHLVLLANMYAGVGQWEQAGKVRERVAALNAGKPAGTS 532
Query: 486 WVQIN 490
V N
Sbjct: 533 RVNPN 537
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 175/502 (34%), Positives = 298/502 (59%), Gaps = 26/502 (5%)
Query: 47 GFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLY 106
GFS +++ + F+ SG ++ A ++F+++ WN +I G+ RS P +++ L+
Sbjct: 151 GFSADVFVVNAGVHFWSVSGSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELF 210
Query: 107 KQMID--KETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYL 164
++++ K PDE T +S CA+ G G+++H V + G V + +M++Y+
Sbjct: 211 WRLVEDGKAVRPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYV 270
Query: 165 MSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTM 224
G + A+ +F+ + ++VVSW +++ G+ + G ++ A +FDEMP R+V W +
Sbjct: 271 KCGS---LELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNAL 327
Query: 225 ISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFS 284
++G QN + ++A++LF+EM+ ++V +++ +V LSAC+++G L++G W+H Y++ +
Sbjct: 328 MAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRH-- 385
Query: 285 VGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL- 343
+ + V+L +L+ MYA CG I++A +F+++ +N ++WT+MI G A G+A EA+
Sbjct: 386 --QLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDKNALTWTAMICGLANHGHADEAIE 443
Query: 344 --------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLF 389
+TF+GVLSAC H G V EGRQFF M++ + ++ +++HY CM+DL
Sbjct: 444 YFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDLL 503
Query: 390 SRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGY 449
RAG +DEA LV MPM P+ V G+L CR+H N L + A KLV E+DP + Y
Sbjct: 504 GRAGHLDEAEQLVNTMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLV-ELDPSDSGIY 562
Query: 450 LALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLI 509
+ L+AN+YA A + VR M +GV K PG S +++NGV+H+F+ D ++ I
Sbjct: 563 V-LLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHLDTIAI 621
Query: 510 YKTLGEITMQAMQEGYKPDISE 531
Y L IT+Q DISE
Sbjct: 622 YDCLHGITLQMKHTANLIDISE 643
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 144/288 (50%), Gaps = 47/288 (16%)
Query: 68 LINAHKVFEKTENP--STAIWNQMIRGHARSETPEKSVY------LYKQMI-DKETEPDE 118
L++A + +P S + +N R A S P + + LY+ ++ PD
Sbjct: 64 LLHALAILASLPSPPDSASPYNAAFR--ALSLCPHRHLVDRHCLPLYRALLCSSSARPDH 121
Query: 119 YTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLL 178
T+ FLL CAR G V G V G+ ++VF+ ++ + +SG + AR L
Sbjct: 122 LTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVHFWSVSG---SMVLARRL 178
Query: 179 FDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQAL 238
FD+ PAR VVSWN+L+ GYV+ G A ++F W + ++GK+
Sbjct: 179 FDESPARDVVSWNTLIGGYVRSGLPREALELF----------WRLV-----EDGKA---- 219
Query: 239 SLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNAL 298
V D+V ++ A+S CA++GDL+LGK +H +V+ S G V L NA+
Sbjct: 220 ----------VRPDEVTMIGAVSGCAQMGDLELGKRLHEFVD---SKGVR-CTVRLMNAV 265
Query: 299 IHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
+ MY CG +E A VF ++ + VSWT+MI G A+ G ++A + F
Sbjct: 266 MDMYVKCGSLELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLF 313
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 133/333 (39%), Gaps = 71/333 (21%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHAR-- 95
++H + G ++ ++ YV G L A VFE+ +N + W MI GHAR
Sbjct: 245 RLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMIVGHARLG 304
Query: 96 ---------SETPEKSVY--------------------LYKQMIDKETEPDEYTYSFLLS 126
E PE+ V+ L+ +M + + +P+E T LLS
Sbjct: 305 MMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLS 364
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPAR 185
C++ G G VH + +V + T+L+++Y +CG + A +F ++P +
Sbjct: 365 ACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMY----AKCGNIKKAICIFKEIPDK 420
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
+ ++W +++ G A +G + +A+ F M
Sbjct: 421 NALTWTAMI-------------------------------CGLANHGHADEAIEYFQRMI 449
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC 305
+ D++ + LSAC G +K G+ S + E + + R+ + + +I +
Sbjct: 450 DLGLQPDEITFIGVLSACCHAGLVKEGRQFFSLMHEKYHLERK---MKHYSCMIDLLGRA 506
Query: 306 GEIEEAYGVFRKM-QRRNTVSWTSMITGFAKQG 337
G ++EA + M + V W ++ G
Sbjct: 507 GHLDEAEQLVNTMPMDPDAVVWGALFFACRMHG 539
>gi|125605669|gb|EAZ44705.1| hypothetical protein OsJ_29332 [Oryza sativa Japonica Group]
Length = 548
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 198/485 (40%), Positives = 299/485 (61%), Gaps = 37/485 (7%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVF-----------EKTENPS 82
+ L Q+H+Q+++NGF +K ++LAKLL+ + L A +F + P+
Sbjct: 62 RALDQLHAQVVLNGFPRKRFLLAKLLSLAAAAADLPRAESLFLAAPAAECSSSTSSSTPT 121
Query: 83 TAIWNQMIRGHARSETP-EKSVYLYKQMIDKET-EPDEYTYSFLLSVCARCGLFR--EGE 138
A N ++R A S P ++ V L+ +++ + P+ +++S LL+ A G G
Sbjct: 122 LA--NLVLRAAASSRAPPDRLVALFSRLVSRHGFRPNAFSFSTLLAALADAGAAALPHGR 179
Query: 139 QVHGRVLASGYC-SNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGY 197
+H R LA G S+ + T+L++LY +G +G AR +FD+MP R+V +WN +L Y
Sbjct: 180 ALHARALACGLVLSSGHVLTSLLDLYAAAGQ---LGEARRVFDEMPGRTVAAWNCMLAAY 236
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
V+ ++D A F+EMP R+ V+WTTMI+GC GK+ +A+ LF MR+A +D V +V
Sbjct: 237 VRCCEMDAALWFFNEMPGRDSVAWTTMIAGCVNAGKAAEAVELFWRMRKANAKVDAVTMV 296
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
A L+ACAE GDL+LG+W+H++VE+ GR+ V L+NALI+MY CG +E+A+ +F
Sbjct: 297 ALLTACAEQGDLRLGRWVHAHVEQE---GRQWRTVLLDNALINMYVKCGAVEDAHRLFLV 353
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEAL------------LTFLGVLSACSHGGFVDEGRQF 365
M RR+TVSWT+MI+G A G A+EAL T L VL ACS+ G VD+GRQ+
Sbjct: 354 MPRRSTVSWTTMISGLAIHGRAEEALDLFHRMQERPDGATLLAVLLACSNAGRVDDGRQY 413
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHN 425
F+ M + +GI P I+HYGCMVD+ + EA V+ M ++PNDAVLG+LL GC+
Sbjct: 414 FQSMERFYGITPGIQHYGCMVDMLCHGKQLREAIEFVETMHLQPNDAVLGALLSGCKREG 473
Query: 426 NAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQS 485
N ELA+QV ++L+ + PE+AAG+L L+AN+YA +W+ VR+++ + KP G S
Sbjct: 474 NLELAAQVIERLI-RLQPERAAGHLVLLANMYAGVGQWEQAGKVRERVAALNAGKPAGTS 532
Query: 486 WVQIN 490
V N
Sbjct: 533 RVNPN 537
>gi|255578276|ref|XP_002530005.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530484|gb|EEF32367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 499
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 180/475 (37%), Positives = 287/475 (60%), Gaps = 32/475 (6%)
Query: 36 LFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKTENPSTAIWNQMIRGH 93
L QIH+ ++ + IL K+L F S G L A ++F++ P+T +N +IRG+
Sbjct: 32 LKQIHAHSLLTDLHNHSVILGKMLRFAAVSPSGDLPYAQRLFDQMPQPNTFFYNTIIRGY 91
Query: 94 ARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFR------EGEQVHGRVLAS 147
A+S +P V L+ QM +PDE+T++FL+ +R E +++HG V
Sbjct: 92 AKSSSPSYCVNLFNQMRQNHVDPDEFTFNFLIKARSRVHKVHNFPSTLECDEIHGAVFKY 151
Query: 148 GYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAW 207
G+CS++F++ L+NLY + G A +F++ VVSW+ L+ +V+ G+++ A
Sbjct: 152 GFCSHLFVQNALINLYAVKGSPAA---AWRVFNETVGVDVVSWSGLVLAHVRGGELELAR 208
Query: 208 KIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIG 267
++FD+MP ++VVSWT M+SG ++ SR+AL LF EM A + D+V +V+ +SAC +G
Sbjct: 209 QVFDDMPEKDVVSWTAMVSGYSKANCSREALELFWEMSDAGIRPDEVTIVSVISACTNLG 268
Query: 268 DLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
D++ G +HSY+ EN G +VSL NALI+MYA CG ++ A+ VF M+R++ ++W
Sbjct: 269 DVETGMNVHSYINEN-GFGW---MVSLCNALINMYAKCGCVDRAWRVFNNMKRKSLITWN 324
Query: 328 SMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQN 372
SMI+ A GYA++A +TFL +L A +H G VDEG + F+ M ++
Sbjct: 325 SMISACANHGYAEDAFELFSCMLNSGIAPDGITFLALLIAYTHKGLVDEGYRLFQIMERD 384
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQ 432
+GI+ IEHYGC+VD+ RAG ++EA+ L+ MP+ ND V G+LL CRI+ + + +
Sbjct: 385 YGIEASIEHYGCIVDMLGRAGRLEEAYELIVTMPIPSNDIVWGALLAACRIYGDVNMGER 444
Query: 433 VAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWV 487
V +KL+ E+ P++ GY L+ ++Y A+ R + +RQ M + G K PG SWV
Sbjct: 445 VVKKLL-ELKPDE-GGYYILLRDIYVASGRTAEANHIRQAMQESGAMKNPGYSWV 497
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 43/105 (40%)
Query: 33 TKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRG 92
+T +HS I NGF + L+ Y G + A +VF + S WN MI
Sbjct: 270 VETGMNVHSYINENGFGWMVSLCNALINMYAKCGCVDRAWRVFNNMKRKSLITWNSMISA 329
Query: 93 HARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
A E + L+ M++ PD T+ LL GL EG
Sbjct: 330 CANHGYAEDAFELFSCMLNSGIAPDGITFLALLIAYTHKGLVDEG 374
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 199/569 (34%), Positives = 307/569 (53%), Gaps = 53/569 (9%)
Query: 15 SKALTTRQIFSLLQIRNTTKT--LFQIHSQIIINGFSQKNYILAKLLAFYVTSGY--LIN 70
+ L+ + I LL +++T L Q+H+ + G Q +Y+ L+ Y + L
Sbjct: 23 TSQLSQKTILDLLNTKSSTSLHHLKQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNF 82
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
A KVFE NP+ ++N +I+G ++ P K++ Y +M+ P+++TY L C
Sbjct: 83 ALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTA 142
Query: 131 CGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSG---------GE------------ 169
EG QVH V+ G +V IR+ + +Y G GE
Sbjct: 143 AEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAM 202
Query: 170 ------CG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWT 222
CG V A+ LF M ++V SWN ++ G K G I+ A ++F+EM +N +SW+
Sbjct: 203 IDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWS 262
Query: 223 TMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEEN 282
MI G + G ++AL +FN M+R + + L + L+ACA +G L G+WIH+YV N
Sbjct: 263 AMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNN 322
Query: 283 FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEA 342
L AL+ MYA CG ++ A+ VF KM+++ +W +MI G G A++A
Sbjct: 323 ----SNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDA 378
Query: 343 L---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVD 387
+ +T LGVLSAC+H G VDEG + F M + +GI+P +EHYGC+VD
Sbjct: 379 IELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVD 438
Query: 388 LFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAA 447
L RAGL+ EA ++ +MPM+P+ AV G+LL CR H + EL +V K++ E++P Q +
Sbjct: 439 LLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVG-KILLELEP-QNS 496
Query: 448 GYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQAS 507
G AL++N+YA A RW DVA VR+ M + GV+ G S + +GV+H+F GD ++ Q
Sbjct: 497 GRYALLSNIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMK 556
Query: 508 LIYKTLGEITMQAMQEGYKPDISELFLGI 536
IY L + + EG+ P+ S++ I
Sbjct: 557 NIYLMLKNMIKRLKMEGFSPNTSQVLFDI 585
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 312/534 (58%), Gaps = 28/534 (5%)
Query: 24 FSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSG--YLINAHKVFEKTENP 81
SLL T K + QIH+++ ++G + ++++ + + S YL A+++ ++++ P
Sbjct: 18 ISLLDSGTTFKEIRQIHAKLYVDGTLKDDHLVGQFVKAVALSDHTYLDYANQILDRSDKP 77
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKET--EPDEYTYSFLLSVCARCGLFREGEQ 139
+ N MIR H +S PEKS Y +++ +PD YT +FL+ C G+ G Q
Sbjct: 78 TLFALNSMIRAHCKSPVPEKSFDFYSRILSSGNGLKPDNYTVNFLVQACTGLGMRETGLQ 137
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVK 199
VHG + G+ ++ ++T L++LY G C C ++ F+ + V +++ +
Sbjct: 138 VHGMTIRRGFDNDPHVQTGLISLYAELG--CLDSCHKV-FNSVSYPDFVCRTAMVTACAR 194
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
GD+ A K+F+ MP ++ ++W MISG AQ G+SR+AL+LF+ M+ V ++ V++++
Sbjct: 195 CGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNGVSMISV 254
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
LSAC ++G L G+W HSY+E N + + V L L+ +YA CG++++A VF M+
Sbjct: 255 LSACTQLGALDQGRWAHSYIERN----KIKITVRLGTTLVDLYAKCGDMDKAMEVFWGME 310
Query: 320 RRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQ 364
+N +W+S + G A G+ ++ L +TF+ VL CS GFVDEG++
Sbjct: 311 EKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQK 370
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
F+ M +GI+P+++HYGC+VDL++RAG +++A S++Q MPMK + AV SLL R++
Sbjct: 371 HFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVWSSLLHASRMY 430
Query: 425 NNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQ 484
N EL ++K++ E++ Y+ L++N+YA + W +V+ VRQ M GVRK PG
Sbjct: 431 KNLELGVLASKKML-ELETSNHGAYV-LLSNIYADSDDWDNVSHVRQSMKSKGVRKQPGC 488
Query: 485 SWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
S +++NG +H+F GD ++ + + I +I+ + GYK D + + I+E
Sbjct: 489 SVMEVNGEVHEFFVGDKSHPKYNEIDAVWKDISRRLRLAGYKADTTPVMFDIDE 542
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 135/440 (30%), Positives = 233/440 (52%), Gaps = 58/440 (13%)
Query: 116 PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCA 175
P+E T+ ++S C G EG +HG V+ SG V + LMNLY
Sbjct: 635 PNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLY------------ 682
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
K GD+ + K+F+++ +N+VSW TMI QNG +
Sbjct: 683 ----------------------GKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAE 720
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE-NFSVGREPVLVSL 294
+ L+ FN R + DQ +A L C +IG ++L + IH + F+ +
Sbjct: 721 EGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNAN-----TCI 775
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------- 343
AL+ +YA G +E++ VF ++ ++++WT+M+ +A GY ++A+
Sbjct: 776 TTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGL 835
Query: 344 ----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAF 399
+TF +L+ACSH G V+EGR +FE M++ + I+PR++HY CMVDL R+GL+ +A+
Sbjct: 836 SPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAY 895
Query: 400 SLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAA 459
L++ MPM+P+ V G+LL CR++ + +L ++ A++L E++P Y+ L +N+Y+A
Sbjct: 896 GLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAKRLF-ELEPRDGRNYIML-SNIYSA 953
Query: 460 AKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
+ W+D + +R M + G+ + G S+++ +H FV GD ++ ++ I K L EI +
Sbjct: 954 SGLWKDASRIRNLMKQKGLVRASGYSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKK 1013
Query: 520 AMQE-GYKPDISELFLGIEE 538
E G+K + ++E
Sbjct: 1014 MKSELGFKSRTEFVLHDVDE 1033
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 126/280 (45%), Gaps = 37/280 (13%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
IH ++ +G ++ ++ L+ Y +G LI++ K+FE + WN MI H ++
Sbjct: 659 IHGLVMKSGVLEEVKVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGL 718
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
E+ + + +PD+ T+ +L VC G+ R + +HG ++ G+ +N I T
Sbjct: 719 AEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTA 778
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
L++L Y K G ++ + +F E+ +
Sbjct: 779 LLDL----------------------------------YAKLGRLEDSSTVFLEITSPDS 804
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
++WT M++ A +G R A+ F M + D V L+AC+ G ++ G++
Sbjct: 805 MAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFET 864
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM 318
+ + + + EP L + ++ + G +++AYG+ ++M
Sbjct: 865 MSKRYRI--EPRLDHY-SCMVDLMGRSGLLQDAYGLIKEM 901
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 179/505 (35%), Positives = 299/505 (59%), Gaps = 28/505 (5%)
Query: 16 KALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVF 75
+ L R I SL T+ L +IH+ ++ SQ N+++ K+L G++ A +F
Sbjct: 7 RELENRYITSLKNCFKITQ-LKKIHAHVVKLSLSQSNFLVTKMLDSCDNLGHVSYATLLF 65
Query: 76 EKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETE---PDEYTYSFLLSVCARCG 132
++ +P+ +N +IR +A + ++ ++ QM+ T PD++T+ F++ C
Sbjct: 66 KQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGIL 125
Query: 133 LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNS 192
R G QVHG V G + L+++Y G+ C +F++M R V+SWNS
Sbjct: 126 CHRLGMQVHGLVYKFGADFHCITENALIDMY-TKFGDLTNACK--VFEEMSHRDVISWNS 182
Query: 193 LLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLD 252
L+ GYVK G ++ A ++FD+MP R +VSWTTMI+G + G AL +F EM+ + D
Sbjct: 183 LIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPD 242
Query: 253 QVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAY 312
+++++A L ACA++G L++GKWIH Y ++N + + + NALI MYA CG I+EA+
Sbjct: 243 EISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGIC----NALIEMYAKCGCIDEAW 298
Query: 313 GVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGG 357
+F ++ ++ +SW++MI G A G EA+ +TFLGVL ACSH G
Sbjct: 299 NLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTG 358
Query: 358 FVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSL 417
DEG ++F+ M+ ++ I+P IEHYGC++DL R+G + +A + MP+KP+ + SL
Sbjct: 359 LWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSL 418
Query: 418 LLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMG 477
L CRIH N ++A +A K + E++PE++ Y+ L+AN+YA +W+DV+ +R+ +
Sbjct: 419 LSSCRIHRNLQIAV-IAVKQLMELEPEESGNYV-LLANMYAEHGKWEDVSNIRKLIRNKR 476
Query: 478 VRKPPGQSWVQINGVLHDFVAGDST 502
++K PG S +++N V+ +FV+ D +
Sbjct: 477 IKKTPGSSSIEVNNVVQEFVSSDDS 501
>gi|225470997|ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
gi|297742795|emb|CBI35475.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 344 bits (882), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 195/521 (37%), Positives = 284/521 (54%), Gaps = 29/521 (5%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQIHSQIIINGF--SQKNYILAKLLAFYVTSGYLINAHKVF 75
+ T+ + LLQ + + L QIH + + G S++ ++ KLL Y G ++A KVF
Sbjct: 1 MNTQTFYFLLQKCGSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQKVF 60
Query: 76 EKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFR 135
+NP W +I + + P K+ ++ + PD + +S C
Sbjct: 61 NHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLS 120
Query: 136 EGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLK 195
G VHG V S+ + L+++Y SG V C+ +F M + V SW SLL
Sbjct: 121 NGRIVHGMVFRFELGSDPIVGNALIDMYSRSGA-IEVACS--VFKTMEIKDVSSWTSLLN 177
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR-RARVGLDQV 254
G++K DI+ A +IFDEMP RN VSWT MI+G Q L LF EMR + +
Sbjct: 178 GFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVI 237
Query: 255 ALVAALSACAEIGDLKLGKWIHSYVEE-NFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
+VA LS CA+IG LG +H YV + N + V++NNAL+ MYA G + A
Sbjct: 238 TIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLD-----VTVNNALMDMYAKSGALVLALK 292
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGF 358
+F++M +R+ SWT+MI+G A G AL +T L VLSACSH G
Sbjct: 293 IFQEMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGVVPNEVTLLSVLSACSHAGL 352
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLL 418
V EGR F+ M Q GIKP+I+HYGCMVDL RAGL+ EA L+++MP+KP+ + SLL
Sbjct: 353 VVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLL 412
Query: 419 LGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
C +H N LA ++A K++ E++P+ Y+ L+ N+Y +A RW+D R+ M V
Sbjct: 413 SACLVHGNLALA-EMAGKMIIELEPDDDGVYI-LLWNIYCSASRWEDALKARKAMRDRRV 470
Query: 479 RKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
+K PG SWV++NGV+H+F+A D+ + + +Y L IT Q
Sbjct: 471 KKKPGCSWVEVNGVVHEFLAEDAVHCIRADVYTVLEAITEQ 511
>gi|147791533|emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
Length = 768
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 195/521 (37%), Positives = 284/521 (54%), Gaps = 29/521 (5%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQIHSQIIINGF--SQKNYILAKLLAFYVTSGYLINAHKVF 75
+ T+ + LLQ + + L QIH + + G S++ ++ KLL Y G ++A KVF
Sbjct: 252 MNTQTFYFLLQKCGSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQKVF 311
Query: 76 EKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFR 135
+NP W +I + + P K+ ++ + PD + +S C
Sbjct: 312 NHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLS 371
Query: 136 EGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLK 195
G VHG V S+ + L+++Y SG V C+ +F M + V SW SLL
Sbjct: 372 NGRIVHGMVFRFELGSDPIVGNALIDMYSRSGA-IEVACS--VFKTMEIKDVSSWTSLLN 428
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR-RARVGLDQV 254
G++K DI+ A +IFDEMP RN VSWT MI+G Q L LF EMR + +
Sbjct: 429 GFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVI 488
Query: 255 ALVAALSACAEIGDLKLGKWIHSYVEE-NFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
+VA LS CA+IG LG +H YV + N + V++NNAL+ MYA G + A
Sbjct: 489 TIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLD-----VTVNNALMDMYAKSGALVLALK 543
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGF 358
+F++M +R+ SWT+MI+G A G AL +T L VLSACSH G
Sbjct: 544 IFQEMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGXXPNEVTLLSVLSACSHAGL 603
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLL 418
V EGR F+ M Q GIKP+I+HYGCMVDL RAGL+ EA L+++MP+KP+ + SLL
Sbjct: 604 VVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLL 663
Query: 419 LGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
C +H N LA ++A K++ E++P+ Y+ L+ N+Y +A RW+D R+ M V
Sbjct: 664 SACLVHGNLALA-EMAGKMIIELEPDDDGVYI-LLWNIYCSASRWEDALKARKAMRDRRV 721
Query: 479 RKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
+K PG SWV++NGV+H+F+A D+ + + +Y L IT Q
Sbjct: 722 KKKPGCSWVEVNGVVHEFLAEDAVHCIRADVYTVLEAITEQ 762
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 203/568 (35%), Positives = 329/568 (57%), Gaps = 53/568 (9%)
Query: 10 NPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY-- 67
+P +S A + +F + T + L QIH+ I +G + A++L F TS
Sbjct: 9 SPGGNSPASS---LFPQINTCRTIRDLSQIHAVFIKSGQIRDTLAAAEILRFCATSDLHH 65
Query: 68 --LINAHKVFEKTENPSTAIWNQMIRGHARSETPEK--SVYLYKQMIDKE-TEPDEYTYS 122
L AHK+F + + WN +IRG + S+ + ++ L+ +M+ E EP+ +T+
Sbjct: 66 RDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFP 125
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV---GCARLLF 179
+L CA+ G ++G+Q+HG L G+ + F+ +NL+ +Y++ CG+ C L +
Sbjct: 126 SVLKACAKTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVI----CGLMKDACV-LFY 180
Query: 180 DDMPARS-------------VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMIS 226
++ R VV WN ++ GY++ GD A +FD+M R+VVSW TMIS
Sbjct: 181 KNIIEREMVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMIS 240
Query: 227 GCAQNGKSRQALSLFNEMRRAR-VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSV 285
G +QNG + A+ +F EM++ + + V LV+ L A + +G L+LG+W+H Y E++ +
Sbjct: 241 GYSQNGFFKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDS-GI 299
Query: 286 GREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-- 343
+ VL S ALI MY+ CG IE+A VF ++ R N ++W++MI GFA G A +A+
Sbjct: 300 RIDDVLGS---ALIDMYSKCGIIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDC 356
Query: 344 -------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFS 390
+ ++ +L+ACSH G V+EGR++F M G++PRIEHYGCMVDL
Sbjct: 357 FCKMRQAGVRPSDVAYINLLTACSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLG 416
Query: 391 RAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYL 450
R GL+DEA + NMP+KP+D + +LL CR+H N E+ +VA L+ ++ P + Y+
Sbjct: 417 RLGLLDEAEEFILNMPIKPDDVIWKALLGACRMHRNVEMGKRVANILM-DMVPHDSGAYV 475
Query: 451 ALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIY 510
AL +N+YA+ W +V+ +R +M +M +RK PG SW+ I+GVLH+F+ D ++ +A I
Sbjct: 476 AL-SNMYASQGNWSEVSEMRLRMKEMDIRKDPGCSWIDIDGVLHEFLVEDDSHPRAKEIN 534
Query: 511 KTLGEITMQAMQEGYKPDISELFLGIEE 538
L EI+ + GY+P +++ L +EE
Sbjct: 535 SMLVEISDKLRLAGYRPITTQVLLNLEE 562
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 343 bits (881), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 194/496 (39%), Positives = 297/496 (59%), Gaps = 30/496 (6%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+HS I GF ++ L+ YV +G L A ++F+++ W MI G+AR+
Sbjct: 174 VHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNW 233
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
++++ L+ M+ + +P+E T LLS C++ G G+ +H + ++ N
Sbjct: 234 LDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRK----DITCSLN 289
Query: 159 LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+N L +CG + AR +F++M R V SW SLL GY K GD+ A K+FDEMP RN
Sbjct: 290 LLNAMLDMYVKCGCLTTAREIFNNMERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERN 349
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL--DQVALVAALSACAEIGDLKLGKWI 275
+VSW MI+G +QN + +AL LF+ M VGL + LV LSA ++G L++G+ I
Sbjct: 350 IVSWNAMIAGYSQNSQPMEALELFHNMVDV-VGLVPTEDTLVCVLSASGQLGCLEMGQEI 408
Query: 276 H-SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
H ++V + +G + L+ L NA++ MYA CG I+ A +F M +N VSW SMI+ +A
Sbjct: 409 HCNHVNK---IGIQVSLI-LKNAVMDMYAKCGSIDAAAKLFHSMPEKNLVSWNSMISAYA 464
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
G+A++AL +TF+GVLSACS+GGFV EG+ FE M +G++P+
Sbjct: 465 SYGHAKKALTLFDQMIGSGLKPDHITFIGVLSACSYGGFVSEGQAHFESMENCFGVEPKR 524
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
EHY CMVDL SR GL+ EA+ L+ MPM+ ++ G+LL CR H N E+A +KL+
Sbjct: 525 EHYACMVDLLSRVGLLKEAYELISRMPMEASEGGWGALLDACRKHGNVEMAKLAGEKLL- 583
Query: 440 EIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG 499
E+DPE +G +L+AN+ A K+W+DV VR+ M + GV+K PG S ++I G H+F+
Sbjct: 584 ELDPED-SGIYSLLANICADGKKWKDVRMVRRMMRERGVKKVPGHSLIEIEGKFHEFLVA 642
Query: 500 DSTYKQASLIYKTLGE 515
D+++ ++S IY+ + E
Sbjct: 643 DTSHTRSSEIYRVVNE 658
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 200/426 (46%), Gaps = 37/426 (8%)
Query: 8 PANPA--TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV-- 63
P P + S + +LQ ++ L QI + I G + + ++LLAF
Sbjct: 38 PGKPKWNSLSNVFISNPTLLILQSCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALS 97
Query: 64 TSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSF 123
SG + AH +F++TE P+ WN MI+G+ ++ P ++QMI E D ++ F
Sbjct: 98 DSGDIHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVF 157
Query: 124 LLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMP 183
L C + G VH + G+ S++F++ L+ Y+ +G C +G AR +FD+
Sbjct: 158 ALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETG--C-LGFARQMFDESS 214
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV----VSWTTMISGCAQNGKSRQALS 239
+ VV+W +++ GY + +D A +F+ M +V V+ ++S C+Q G S +
Sbjct: 215 VKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKT 274
Query: 240 LFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
L +RR + L A L + G L + I + +E R V +L+
Sbjct: 275 LHEHIRRKDITCSLNLLNAMLDMYVKCGCLTTAREIFNNME------RRDVFSW--TSLL 326
Query: 300 HMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF------------- 346
+ YA G++ A +F +M RN VSW +MI G+++ EAL F
Sbjct: 327 NGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALELFHNMVDVVGLVPTE 386
Query: 347 ---LGVLSACSHGGFVDEGRQFFECMNQN-WGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
+ VLSA G ++ G++ C + N GI+ + ++D++++ G +D A L
Sbjct: 387 DTLVCVLSASGQLGCLEMGQE-IHCNHVNKIGIQVSLILKNAVMDMYAKCGSIDAAAKLF 445
Query: 403 QNMPMK 408
+MP K
Sbjct: 446 HSMPEK 451
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 183/505 (36%), Positives = 296/505 (58%), Gaps = 33/505 (6%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++ I+ G NY+ L+ Y + NA K+F++ + WN MI G+ R
Sbjct: 264 KVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCR 323
Query: 98 TPEKSVYLYKQMIDKETE-PDEYTYSFLLSVCARCGLFREGEQVHGRVLAS-GYCSNVFI 155
E ++ +++M + E PDE T LS C G+++H V G+ + I
Sbjct: 324 RFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTR--I 381
Query: 156 RTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP 214
L+++Y +CG + AR +FD+M ++V+ W S++ GY+ GD+ A +FD+ P
Sbjct: 382 DNALLDMY----AKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSP 437
Query: 215 HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKW 274
R+VV WT MI+G Q A++LF EM+ RV D+ +V L+ CA++G L+ GKW
Sbjct: 438 VRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKW 497
Query: 275 IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
IH Y++EN R + V + ALI MY+ CG ++++ +F +++ ++T SWTS+I G A
Sbjct: 498 IHGYLDEN----RITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLA 553
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
G EAL +TF+GVLSACSHGG V+EGR+FF M + I+P++
Sbjct: 554 MNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKV 613
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL---GSLLLGCRIHNNAELASQVAQK 436
EHYGC++DL RAGL+DEA L+Q +P++ + V+ G+LL CRIHNN ++ ++A+K
Sbjct: 614 EHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKK 673
Query: 437 LVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDF 496
L I+ ++ + L+AN+YA+ RW+D VR+KM ++GV+K PG S ++++G++H+F
Sbjct: 674 L-ENIESCDSSIH-TLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEF 731
Query: 497 VAGDSTYKQASLIYKTLGEITMQAM 521
+ GD ++ + I L +T Q +
Sbjct: 732 LVGDPSHPEMMEICSMLNRVTGQLL 756
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 155/327 (47%), Gaps = 40/327 (12%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVF 75
LT + L+ + L QI SQI G + KL+AF S G L A K+F
Sbjct: 141 LTKKSCIECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIF 200
Query: 76 EKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFR 135
++PS ++N M++ +A+ K + L++Q+ + PD +TY F+L R
Sbjct: 201 NYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVR 260
Query: 136 EGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLK 195
+GE+V G ++ +G + ++ +L+++Y V A+ LFD+M R VSWN ++
Sbjct: 261 QGEKVRGFIVKTGMDLDNYVYNSLIDMYYELS---NVENAKKLFDEMTTRDSVSWNVMIS 317
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVA 255
GYV+ + A F EM Q G + D+
Sbjct: 318 GYVRCRRFEDAINTFREM---------------QQEGNEKP---------------DEAT 347
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
+V+ LSAC + +L+LG IH+YV + ++NAL+ MYA CG + A +F
Sbjct: 348 VVSTLSACTALKNLELGDEIHNYVRKELG-----FTTRIDNALLDMYAKCGCLNIARNIF 402
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEA 342
+M +N + WTSMI+G+ G +EA
Sbjct: 403 DEMSMKNVICWTSMISGYINCGDLREA 429
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 183/512 (35%), Positives = 283/512 (55%), Gaps = 34/512 (6%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEK----TENPSTAIWNQMIRGHA 94
IH+ ++ G + + L+ Y G A V E T + +WN +I GH
Sbjct: 78 IHAHVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAACLATGGGAPVMWNALISGHN 137
Query: 95 RSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVF 154
RS E S + M+ TY +LS C + G QVH RVL SG +
Sbjct: 138 RSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQR 197
Query: 155 IRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
+ L+++Y ECG + A +LF+ M RS+ SW S++ G V+ G +D A +FD M
Sbjct: 198 VENALVDMY----AECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARDLFDHM 253
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK 273
P R+ ++WT MI G Q G+ R AL F M+ +V D+ +V+ ++ACA++G L+ G+
Sbjct: 254 PERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGE 313
Query: 274 WIHSYVEENFSVGREPVL--VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMIT 331
W Y+ GR + V + NALI MY+ CG IE A VF+ M R+ +WT++I
Sbjct: 314 WARIYM------GRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIIL 367
Query: 332 GFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIK 376
G A G +EA+ +TF+GVL+AC+H G VD+GR+FF M + + I
Sbjct: 368 GLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNIS 427
Query: 377 PRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQK 436
P + HYGC++D+ RAG + EA + MPMKPN + G+LL CR++ N+E+ A++
Sbjct: 428 PTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAER 487
Query: 437 LVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDF 496
L+ E+DP+ + Y+ L++N+YA + RW+DV +RQ +++ G++K PG S +++NG++H+F
Sbjct: 488 LL-ELDPDNSTAYI-LLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMIEMNGIIHEF 545
Query: 497 VAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
VA D ++ IY L + GY PD
Sbjct: 546 VAADRSHPMNKEIYSKLENVLTDLRNAGYVPD 577
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 136/301 (45%), Gaps = 19/301 (6%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
Q+H +++ +G + L+ Y G + A +FE + S A W +I G RS
Sbjct: 181 MQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRS 240
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHG-----RVLASGYCS 151
+++ + + D E D ++ ++ + G FR+ + +V A + +
Sbjct: 241 GQVDRA----RDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEF-T 295
Query: 152 NVFIRTNLMNLYLMSGGECGVGCARLLFDDMPAR-SVVSWNSLLKGYVKRGDIDGAWKIF 210
V + T L + GE AR+ + + V N+L+ Y K G I+ A +F
Sbjct: 296 MVSVVTACAQLGALETGE----WARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVF 351
Query: 211 DEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLK 270
+M +R+ +WT +I G A NG+ +A+ +F M RA D+V V L+AC G +
Sbjct: 352 KDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVD 411
Query: 271 LGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSM 329
G+ + E +++ P +V LI + G+++EA KM + N+ W ++
Sbjct: 412 KGREFFLSMTEAYNI--SPTVVHY-GCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTL 468
Query: 330 I 330
+
Sbjct: 469 L 469
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 97/442 (21%), Positives = 173/442 (39%), Gaps = 127/442 (28%)
Query: 91 RGHARSET-----PEKSVYLYKQMIDKETEPDEYTYSFLLS-----VCARCGLFREGEQV 140
RG A S + E++V Y +M+ PD YT+ LL A G +
Sbjct: 19 RGRAASSSVSGHGAEEAVAGYVRMLAGGARPDAYTFPSLLKAAAAARGAAVAAASVGGAI 78
Query: 141 HGRVLASGYCSNVFIRTNLMNLY-----------------LMSGGECGVGCARLLFDDMP 183
H V+ G SN ++L+ +Y L +GG
Sbjct: 79 HAHVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAACLATGGG-------------- 124
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
+ V WN+L+ G+ + G + +S C+ F +
Sbjct: 125 --APVMWNALISGHNRSGRFE--------------------LSCCS-----------FVD 151
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
M RA V V+ LSAC + DL LG +H V E+ + + V NAL+ MYA
Sbjct: 152 MVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQRV----ENALVDMYA 207
Query: 304 SCGEIEEAYGVFRKMQ-------------------------------RRNTVSWTSMITG 332
CG+++ A+ +F MQ R+T++WT+MI G
Sbjct: 208 ECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDG 267
Query: 333 FAKQGYAQEALLTF---------------LGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
+ + G ++AL TF + V++AC+ G ++ G ++ GIK
Sbjct: 268 YVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETG-EWARIYMGRLGIKM 326
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
+ ++D++S+ G ++ A + ++M + + +++LG ++ E A + ++
Sbjct: 327 DVFVGNALIDMYSKCGSIERALDVFKDMHNR-DKFTWTAIILGLAVNGRGEEAIDMFYRM 385
Query: 438 VAEID-PEQAAGYLALVANVYA 458
+ + P++ L A +A
Sbjct: 386 LRALQTPDEVTFVGVLTACTHA 407
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 191/546 (34%), Positives = 306/546 (56%), Gaps = 46/546 (8%)
Query: 24 FSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS-----GYLINAHKVFEKT 78
SL Q + + + Q+H+ + ++ ++LLA Y GY A +F++
Sbjct: 20 LSLFQTCSAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGY---ARSIFDRI 76
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE 138
+ S WN +I+ + ++ + L+ +++ E PD +T ++ CAR G+ +EG+
Sbjct: 77 QRRSLIHWNTIIKCYVENQFSHDGIVLFHELV-HEYLPDNFTLPCVIKGCARLGVVQEGK 135
Query: 139 QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVV--------- 188
Q+HG L G+ S+VF++ +L+N+Y +CG + CAR +FD M + VV
Sbjct: 136 QIHGLALKIGFGSDVFVQGSLVNMY----SKCGEIDCARKVFDGMIDKDVVLWNSLIDGN 191
Query: 189 --SWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
SWN+++ GY+K GD D A ++F +MP ++V+W MI+G NG+ A+ +F M +
Sbjct: 192 LVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLK 251
Query: 247 ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCG 306
LV+ LSA + + L G+WIHSY+E+N G E + L +LI MYA CG
Sbjct: 252 LGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKN---GFELDGI-LGTSLIEMYAKCG 307
Query: 307 EIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLS 351
IE A VFR +Q++ WT++I G G A AL + F+GVL+
Sbjct: 308 CIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLN 367
Query: 352 ACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPND 411
AC+H G VD+GRQ+F+ M + I+P +EHYGC+VD+ RAG ++EA + ++NMP+ PN
Sbjct: 368 ACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNK 427
Query: 412 AVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQ 471
+ SLL G R H ++ AQ+++ E+ PE Y+ L++N+YAA+ W+ V+ VR+
Sbjct: 428 VIWMSLLGGSRNHGKIDIGEYAAQRVI-EVAPETIGCYI-LLSNMYAASGMWEKVSHVRE 485
Query: 472 KMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISE 531
M K G RK PG S V+ G LH+F+ GD ++ Q IY + E+ + G+ PD ++
Sbjct: 486 MMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQ 545
Query: 532 LFLGIE 537
+ L IE
Sbjct: 546 VLLCIE 551
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 189/588 (32%), Positives = 313/588 (53%), Gaps = 88/588 (14%)
Query: 14 SSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHK 73
S++ L +++ L + N + + Q+H+QI+ + +++ KL++ + ++ A
Sbjct: 15 STRKLLEQKLSDLHKCTNLNQ-VKQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLLATN 73
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGL 133
F + + P+ ++N MIR H+ + P ++ + M D +T+ FLL VC
Sbjct: 74 AFNQVQYPNVHLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTGNVW 133
Query: 134 FREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGC------------------- 174
E VH ++ G+ S+VF+ +L++ Y G CG+
Sbjct: 134 LPVIESVHAQIEKFGFMSDVFVPNSLIDSY-SKCGSCGISAAKKLFVSMGARRDVVSWNS 192
Query: 175 -------------ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSW 221
AR +FD+MP + +SWN++L GYVK G +D A+K+FDEMP RNVVSW
Sbjct: 193 MISGLAKGGLYEEARKVFDEMPEKDGISWNTMLDGYVKVGKMDDAFKLFDEMPERNVVSW 252
Query: 222 TTM-------------------------------ISGCAQNGKSRQALSLFNEMRRARVG 250
+TM +SG A+ G +R+A+SLF++M +A +
Sbjct: 253 STMVLGYCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQMEKACLK 312
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYVE-ENFSVGREPVLVSLNNALIHMYASCGEIE 309
LD +++ L+ACAE G L LG+ IH+ ++ NF E ++NAL+ MYA CG +
Sbjct: 313 LDNGTVMSILAACAESGLLGLGEKIHASIKNNNFKCTTE-----ISNALVDMYAKCGRLN 367
Query: 310 EAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACS 354
AY VF ++ ++ VSW +M+ G A G+ +AL +T +GVL AC+
Sbjct: 368 IAYDVFNDIKNKDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGFSPNKVTMIGVLCACT 427
Query: 355 HGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL 414
H G +D+G ++F M +++ + P +EHYGCMVDL R G ++EA L++NMPM PN +
Sbjct: 428 HAGLIDDGIRYFSTMERDYTLVPEVEHYGCMVDLLGRKGRLEEAIRLIRNMPMAPNAIIW 487
Query: 415 GSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMI 474
G+LL CR+HN ELA +V LV E++P +G ++++N+YAAA W VA R +M
Sbjct: 488 GTLLGACRMHNAVELAREVLDHLV-ELEPTD-SGNFSMLSNIYAAAGDWNCVANTRLRMR 545
Query: 475 KMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQ 522
+G +KP G S +++N +H+F D ++ ++ IY+ + + + Q
Sbjct: 546 SIGTKKPSGASSIEVNNEVHEFTVFDRSHPKSDNIYQVINGLRHELKQ 593
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 200/575 (34%), Positives = 311/575 (54%), Gaps = 64/575 (11%)
Query: 14 SSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINA 71
+S+ L +FS + + +T+ QI + I + + KLL + L A
Sbjct: 2 NSRELHCLALFSKCK---SLRTVKQIQALIFKTCLNSYPLVSGKLLLHCAVTLPDSLHYA 58
Query: 72 HKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETE-PDEYTYSFLLSVCAR 130
++F NP ++N +IRG + S+TP ++ L+ +M K PD ++++FLL A
Sbjct: 59 RRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAAN 118
Query: 131 CGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGEC-------------------- 170
C G Q+H + G S++F+ T L+++Y EC
Sbjct: 119 CRALTNGLQLHCLAVGYGLDSHLFVGTTLISMY----AECACLVFARKVFDEMIEPNIVA 174
Query: 171 ------------GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
GV A +F MP R++ SWN +L GY K G++ A ++F +MP ++
Sbjct: 175 WNAIVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDD 234
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
VSW+TMI G A NG A + F E+RR + ++V+L LSACA+ G + G+ +H +
Sbjct: 235 VSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGF 294
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
VE++ + ++S+NNALI Y+ CG ++ A VF M RR+ VSWT+MI G A GY
Sbjct: 295 VEKSGFLQ----IISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGY 350
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
+EA+ +TF+ +L ACSH G VD G +F M +GI+P IEHYG
Sbjct: 351 GEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYG 410
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
CMVDL+ RAG + +A+ V MP+ PND V +LL C IH N LA QV ++L +E+DP
Sbjct: 411 CMVDLYGRAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQL-SELDP 469
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
E + ++ L++N+YA A +W+DVAA+R+ M ++K PG S +++N +++ FVAG+
Sbjct: 470 ENSGDHV-LLSNIYAVAGKWKDVAALRRSMTHQRLKKTPGWSMIEVNRIIYSFVAGEKQN 528
Query: 504 KQASLIYKTLGEITMQAMQE-GYKPDISELFLGIE 537
A ++ L EI + E GY P++ + IE
Sbjct: 529 DIAVEAHQKLREIMSRLRIEGGYVPEVGSVLHDIE 563
>gi|224082560|ref|XP_002306741.1| predicted protein [Populus trichocarpa]
gi|222856190|gb|EEE93737.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 179/513 (34%), Positives = 303/513 (59%), Gaps = 31/513 (6%)
Query: 32 TTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLIN-AHKVFEKTENPSTAIWNQMI 90
+ K L +IH+Q+I G ++ +++LAF + IN A+ VF + NP+ +WN +I
Sbjct: 8 SMKDLQKIHAQLIKTGLAKDTIAASRVLAFCTSPAGDINYAYLVFTQIRNPNLFVWNTII 67
Query: 91 RGHARSETPEKSVYLYKQMI--DKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASG 148
RG ++S TP ++ L+ M+ T+P TY + A+ GL EG Q+HGRV+ G
Sbjct: 68 RGFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGAQLHGRVIKLG 127
Query: 149 YCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAW 207
++ FI+ ++N+Y+ CG +G A+ +FD VV+WN+++ G K G+ID +
Sbjct: 128 LENDQFIQNTILNMYV----NCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCGEIDKSR 183
Query: 208 KIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIG 267
++FD+M RN VSW +MISG + G+ +A+ LF+ M+ + + +V+ L+ACA +G
Sbjct: 184 RLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLNACACLG 243
Query: 268 DLKLGKWIHSY-VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSW 326
L+ G+WIH Y V+ NF++ + A+I MY+ CG I++A VF+ ++ W
Sbjct: 244 ALRQGEWIHDYIVKNNFALNSIVI-----TAIIDMYSKCGSIDKALQVFKSAPKKGLSCW 298
Query: 327 TSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQ 371
S+I G A G EA+ ++F+GVL+AC+H G VD + +F M++
Sbjct: 299 NSLILGLAMSGRGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAKDYFLLMSE 358
Query: 372 NWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELAS 431
+ I+P I+HY CMVD+ RAGL++EA L+++MP+ P+ + GSLL CR + N E+A
Sbjct: 359 TYKIEPSIKHYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCREYGNIEMAK 418
Query: 432 QVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQING 491
Q A++ V E+DP +++ ++ L++NVYAA +++ R + + + K PG S +++NG
Sbjct: 419 QAAKR-VNELDPNESSSFI-LLSNVYAAHNHFEEAIEQRLSLKEKQMDKEPGCSLIEVNG 476
Query: 492 VLHDFVAGDSTYKQASLIYKTLGEITMQAMQEG 524
+H+FVAG + ++ IY L ++ + + G
Sbjct: 477 EVHEFVAGGRLHPRSKDIYHALDDLGLTLKEMG 509
>gi|225446849|ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 190/526 (36%), Positives = 302/526 (57%), Gaps = 36/526 (6%)
Query: 16 KALTTRQIFSLLQIRNTT-KTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAH 72
K ++ S+L+ TT K L +IH+ ++ G ++ ++ +LAF TS G + A+
Sbjct: 19 KFISDHPHLSILEKHCTTMKDLQKIHAHLLKTGLAKHPLAVSPVLAFCATSPGGDINYAY 78
Query: 73 KVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQM-IDKETEPDEYTYSFLLSVCARC 131
VF + +P+ WN +IRG ++S TP ++ L+ M I +P TY + A+
Sbjct: 79 LVFTQIHSPNLFSWNTIIRGFSQSSTPHHAISLFIDMLIVSSVQPHRLTYPSVFKAYAQL 138
Query: 132 GLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCA---RLLFDDMPARSVV 188
GL G Q+HGRV+ G + FIR ++ +Y G + A R+ FD +V
Sbjct: 139 GLAHYGAQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYERMDFD------IV 192
Query: 189 SWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR 248
+WNS++ G K G++D + K+FDEMP RN VSW +MISG +NG+ R+AL LF +M+ R
Sbjct: 193 AWNSMIMGLAKCGEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLFGQMQEER 252
Query: 249 VGLDQVALVAALSACAEIGDLKLGKWIHSYVEE-NFSVGREPVLVSLNNALIHMYASCGE 307
+ + +V+ L+A A +G LK G+WIH Y+ + NF + V + ++I MY CG
Sbjct: 253 IKPSEFTMVSLLNASARLGALKQGEWIHDYIRKNNFELN-----VIVTASIIDMYCKCGS 307
Query: 308 IEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSA 352
I EA+ VF + SW +MI G A G EA+ +TF+GVL+A
Sbjct: 308 IGEAFQVFEMAPLKGLSSWNTMILGLAMNGCENEAIQLFSRLECSNLRPDDVTFVGVLTA 367
Query: 353 CSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDA 412
C++ G VD+ +++F M++ + I+P I+HY CMVD RAGL++EA L++NMP+ P+
Sbjct: 368 CNYSGLVDKAKEYFSLMSKTYKIEPSIKHYSCMVDTLGRAGLLEEAEELIRNMPVNPDAI 427
Query: 413 VLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQK 472
+ SLL CR H N ELA + A+ +V ++D + GY+ L++N+YAA+ ++++ R
Sbjct: 428 IWSSLLSACRKHGNVELAKRAAKHIV-DLDGNDSCGYV-LLSNIYAASDQFEEAMEQRLS 485
Query: 473 MIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITM 518
M + + K PG S +++NG +H+FVAG + QA +Y L E+ M
Sbjct: 486 MKEKQIEKEPGCSLIEVNGEIHEFVAGGRLHPQAQEVYSLLNELGM 531
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 181/505 (35%), Positives = 296/505 (58%), Gaps = 33/505 (6%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++ I+ G NY+ L+ Y + NA K+F++ + WN MI G+ R
Sbjct: 218 KVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCR 277
Query: 98 TPEKSVYLYKQMIDKETE-PDEYTYSFLLSVCARCGLFREGEQVHGRVLAS-GYCSNVFI 155
E ++ +++M + E PDE T LS C G+++H V G+ + I
Sbjct: 278 RFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTR--I 335
Query: 156 RTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP 214
L+++Y +CG + AR +FD+M ++V+ W S++ GY+ GD+ A +FD+ P
Sbjct: 336 DNALLDMY----AKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSP 391
Query: 215 HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKW 274
R+VV WT MI+G Q A++LF EM+ ++ D+ +V L+ CA++G L+ GKW
Sbjct: 392 VRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKW 451
Query: 275 IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
IH Y++EN R + V + ALI MY+ CG ++++ +F +++ ++T SWTS+I G A
Sbjct: 452 IHGYLDEN----RITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLA 507
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
G EAL +TF+GVLSACSHGG V+EGR+FF M + I+P++
Sbjct: 508 MNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKV 567
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL---GSLLLGCRIHNNAELASQVAQK 436
EHYGC++DL RAGL+DEA L+Q +P++ + V+ G+LL CRIHNN ++ ++A+K
Sbjct: 568 EHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKK 627
Query: 437 LVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDF 496
L I+ ++ + L+AN+YA+ RW+D VR+KM ++GV+K PG S ++++G++H+F
Sbjct: 628 L-ENIESCDSSIH-TLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEF 685
Query: 497 VAGDSTYKQASLIYKTLGEITMQAM 521
+ GD ++ + I L +T Q +
Sbjct: 686 LVGDPSHPEMIEICSMLNRVTGQLL 710
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 162/339 (47%), Gaps = 42/339 (12%)
Query: 8 PANPATSSKALTTRQIFSLLQIRN--TTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS 65
P ++S+ L T + + +RN + L QI SQI G + KL+AF S
Sbjct: 83 PPFSSSSASNLQTNKKSCIECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADS 142
Query: 66 --GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSF 123
G L A K+F ++PS ++N M++ +A+ K + L++Q+ + PD +TY F
Sbjct: 143 SLGNLRYAEKIFNYVQDPSLFVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPF 202
Query: 124 LLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMP 183
+L R+GE+V G ++ +G + ++ +L+++Y V A+ LFD+M
Sbjct: 203 VLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELS---NVENAKKLFDEMT 259
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
R VSWN ++ GYV+ + A F EM Q G +
Sbjct: 260 TRDSVSWNVMISGYVRCRRFEDAINTFREM---------------QQEGNEKP------- 297
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
D+ +V+ LSAC + +L+LG IH+YV + ++NAL+ MYA
Sbjct: 298 --------DEATVVSTLSACTALKNLELGDEIHNYVRKELG-----FTTRIDNALLDMYA 344
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEA 342
CG + A +F +M +N + WTSMI+G+ G +EA
Sbjct: 345 KCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREA 383
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 191/514 (37%), Positives = 290/514 (56%), Gaps = 27/514 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH I + +S Y+ + L+ Y + +A + F+ + + WN +I + ++
Sbjct: 172 QIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNG 231
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLA-SGYCSNVFIR 156
K++ ++ +M++ EPDE T + + S CA REG Q+H RV+ Y +++ +
Sbjct: 232 PAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLG 291
Query: 157 TNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
L+++Y +C V ARL+FD MP R VVS S++ GY K + A +F M
Sbjct: 292 NALVDMY----AKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMME 347
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
RNVVSW +I+G QNG++ +A+ LF ++R + L+ACA + DLKLG+
Sbjct: 348 RNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQA 407
Query: 276 HSYVEEN---FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
H+++ ++ F G E + + N+LI MY CG +E+ VF +M R+ VSW +MI G
Sbjct: 408 HTHILKHGFWFKSG-EDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVG 466
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
+A+ GY EAL +T +GVLSACSH G V+EGR +F+ M G+ P
Sbjct: 467 YAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVP 526
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
+HY CMVDL RAG +DEA +L+Q MPM+P+ V GSLL C++H N L VA++L
Sbjct: 527 VKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERL 586
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
+ EIDP + Y+ L++N+YA RW+DV VR++M +MGV K PG SW+ I LH F+
Sbjct: 587 L-EIDPLNSGPYV-LLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQSHLHVFM 644
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQEGYKPDISE 531
D + IY L +T Q + GY P+ +
Sbjct: 645 VKDKRHPHKKDIYLILKILTEQMKRVGYVPEADD 678
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 160/320 (50%), Gaps = 24/320 (7%)
Query: 105 LYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYL 164
L ++++ + D ++ LL C + E VH R++ + + S +FI+ L+++Y
Sbjct: 6 LVRKVVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVY- 64
Query: 165 MSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTT 223
G+CG + AR +FD M R+ SWN++L K G +D A +F MP R+ SW
Sbjct: 65 ---GKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNA 121
Query: 224 MISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENF 283
M+SG AQ + +AL +M L++ + +ALSACA + DL +G IH + ++
Sbjct: 122 MVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKS- 180
Query: 284 SVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL 343
R + V + +AL+ MY+ C + A F M RN VSW S+IT + + G A +AL
Sbjct: 181 ---RYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKAL 237
Query: 344 ---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDL 388
+T V SAC+ + EG Q + ++ + + +VD+
Sbjct: 238 EVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDM 297
Query: 389 FSRAGLMDEAFSLVQNMPMK 408
+++ ++EA + MP++
Sbjct: 298 YAKCRRVNEARLVFDRMPLR 317
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 164/364 (45%), Gaps = 73/364 (20%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQ---IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKV 74
L + LL +K++F+ +H++II FS + +I +L+ Y G+L +A KV
Sbjct: 17 LDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKV 76
Query: 75 FEKTENPST-------------------------------AIWNQMIRGHARSETPEKSV 103
F+ + +T WN M+ G A+ + E+++
Sbjct: 77 FDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEAL 136
Query: 104 YLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLY 163
M ++ +EY++ LS CA G Q+HG + S Y +V++ + L+++Y
Sbjct: 137 RFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMY 196
Query: 164 LMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWT 222
+C V A+ FDDM R++VSWNSL+ Y
Sbjct: 197 ----SKCRVVASAQRAFDDMDVRNIVSWNSLITCY------------------------- 227
Query: 223 TMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEEN 282
QNG + +AL +F M + D++ L + SACA + ++ G IH+ V ++
Sbjct: 228 ------EQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKH 281
Query: 283 FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEA 342
+ V L NAL+ MYA C + EA VF +M R+ VS TSM++G+AK + A
Sbjct: 282 DKYRNDLV---LGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAA 338
Query: 343 LLTF 346
L F
Sbjct: 339 RLMF 342
>gi|224073108|ref|XP_002303975.1| predicted protein [Populus trichocarpa]
gi|222841407|gb|EEE78954.1| predicted protein [Populus trichocarpa]
Length = 508
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 178/496 (35%), Positives = 279/496 (56%), Gaps = 25/496 (5%)
Query: 43 IIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEK-TENPSTAIWNQMIRGHARSET-PE 100
+++ N +L++ + + G+ A+ +F T P ++N +I+ + S T P+
Sbjct: 1 MLLRALDTDNLLLSRFIHACSSLGFYSYAYSLFTSITHAPDIYLYNNIIKALSSSPTHPK 60
Query: 101 KSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLM 160
S++LY + PD Y++ F L R + G Q+H + + G S++ + T +
Sbjct: 61 ASIFLYNNIQLAGLRPDSYSFPFALKAVTRFSSIQTGRQLHSQSIRFGLHSDLHVLTAFV 120
Query: 161 NLYLMSGGECGVGCARLLFDDMPARS--VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
+Y G C + AR +FD M + V WN++L GY K GD+ A +F+ MP RNV
Sbjct: 121 QMYSSFGSGC-ICDARKMFDGMSMSTGDVALWNAMLNGYAKHGDLCNARDLFERMPQRNV 179
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
+SWT +I+G AQ + A++LF M+ V D++A++ AL+ACA +G L+LG+WI Y
Sbjct: 180 ISWTALITGYAQANRPHDAIALFRRMQLENVEPDEIAMLVALTACARLGALELGEWIRHY 239
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
++ +G + LNNALI MYA G+I+ A VF M + ++WT+MI G A G
Sbjct: 240 IDR---LGLLTTNIPLNNALIDMYAKSGDIKSALQVFENMNHKTIITWTTMIAGLALHGL 296
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
EAL +TF+ +LSACSH G V GR +F M +GI+P+IEHYG
Sbjct: 297 GTEALEMFSRMERARVKPNDITFIAILSACSHVGLVQTGRWYFNRMISRYGIEPKIEHYG 356
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
CM+DL RAG + EA +L+ MP +PN + GSLL C H + EL Q L+ E++P
Sbjct: 357 CMIDLLGRAGHLKEAQTLLAQMPFEPNAVIWGSLLAACNTHGDPELGELALQHLL-ELEP 415
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
+ + Y AL++N+YA+ RW + VR+ M GV+K PG S +++N +H+F+AG+ ++
Sbjct: 416 DNSGNY-ALLSNIYASRGRWNESRVVRKVMWDAGVKKMPGGSLIEVNNRVHEFIAGEISH 474
Query: 504 KQASLIYKTLGEITMQ 519
Q I + L +I Q
Sbjct: 475 SQFDRIQEVLSKINRQ 490
>gi|224141809|ref|XP_002324255.1| predicted protein [Populus trichocarpa]
gi|222865689|gb|EEF02820.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 185/554 (33%), Positives = 315/554 (56%), Gaps = 47/554 (8%)
Query: 12 ATSSKALTTRQI----FSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY 67
AT AL R++ +LQ L IH+ +I SQ ++++ K++ +
Sbjct: 2 ATRIGALKIRELENFFVPILQNCKNIVELKSIHAHVIKYSLSQSSFLVTKMVDVCDKTED 61
Query: 68 LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMI---DKETE----PDEYT 120
L A +F++ + P+ ++N MIR H ++ ++ YK+M+ D E+E PD +T
Sbjct: 62 LGYASLLFKQVKEPNGYLYNAMIRAHTHNKVYALAILFYKEMLRLKDPESENPIFPDRFT 121
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLL-- 178
+ F++ C+ + G+QVH + G SN+ + L+++Y CA LL
Sbjct: 122 FPFVIKSCSGLVCYNLGKQVHAHLCKFGPKSNITMENALIDMY--------TKCASLLDA 173
Query: 179 ---FDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
FD M R +SWNS++ G+V G + A +FD MP+R +VSWT MISG + G
Sbjct: 174 HKVFDGMVERDAISWNSIISGHVGVGQMRKAGALFDLMPYRTIVSWTAMISGYTRLGSYA 233
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
AL +F +M+ V D++++++ L ACA++G L++GKWIH Y + N + + S+
Sbjct: 234 DALYVFRQMQIVGVEPDEISIISVLPACAQLGALEVGKWIHMYCDRNGLLRK----TSIC 289
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------ 343
NAL+ MY+ CG I +AY +F +M + + +SW++MI G A G A+EA+
Sbjct: 290 NALMEMYSKCGCIGQAYQLFDQMSKGDVISWSTMIGGLANHGKAREAIELFKRMKKAKIE 349
Query: 344 ---LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFS 400
+TFLG+LSAC+H GF +EG +F+ M++++ I+P +EHYGC+VD+ RAG + +A
Sbjct: 350 PNGITFLGLLSACAHAGFWNEGLAYFDSMSKDYHIEPEVEHYGCLVDILGRAGRLSQALD 409
Query: 401 LVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAA 460
+++ MPMKP+ + GSLL CR H+N ++A +A + + E++P+ Y+ L++N+YA
Sbjct: 410 VIEKMPMKPDSKIWGSLLSSCRTHSNLDIAI-IAMEHLEELEPDDTGNYV-LLSNIYADL 467
Query: 461 KRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQA 520
+W V+ +R+ + ++K PG S + IN V+ +FV+ D + + I+ L +T +
Sbjct: 468 AKWDGVSRMRKLIKSKSMKKTPGSSLIDINNVVQEFVSWDDSKPFSRDIFWLLELLT--S 525
Query: 521 MQEGYKPDISELFL 534
Q+ P + E+ L
Sbjct: 526 HQDTTDPHLIEIML 539
>gi|359479098|ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 188/480 (39%), Positives = 280/480 (58%), Gaps = 33/480 (6%)
Query: 72 HKVFEKTENPSTAI--WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
H T +P I W I H R+ ++ + +M P+ T+ LLS C
Sbjct: 41 HLTRSHTHSPIDPIVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACT 100
Query: 130 RCGL--FREGEQVHGRVLASGY-CSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPAR 185
L R G +H V G NV + T L+++Y +CG + A L+FD+M R
Sbjct: 101 DFPLEGLRFGGSIHAYVRKLGLDTENVMVGTALVDMY----SKCGQLDLAWLMFDEMHVR 156
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
+ VSWN+++ G ++ G++ A +FD+M R+ +SWT+MI G + G QAL F EM+
Sbjct: 157 NSVSWNTMIDGCMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQ 216
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYV-EENFSVGREPVLVSLNNALIHMYAS 304
A V D V +++ L+ACA +G L LG WI+ +V +++F + ++N+LI MY+
Sbjct: 217 LAGVEPDYVTIISVLAACANLGALGLGLWINRFVMKQDFKDN-----IKISNSLIDMYSR 271
Query: 305 CGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGV 349
CG I A VF +M +R+ VSW SMI GFA G+A+EAL ++F G
Sbjct: 272 CGCIRLARQVFEQMPKRSLVSWNSMIVGFALNGHAEEALEFFNLMRKEGFRPDGVSFTGA 331
Query: 350 LSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKP 409
L+ACSH G VDEG QFF+ M + I PRIEHYGC+VDL+SRAG +++A +++ NMPMKP
Sbjct: 332 LTACSHSGLVDEGLQFFDIMKRTRKISPRIEHYGCLVDLYSRAGRLEDALNVIANMPMKP 391
Query: 410 NDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAV 469
N+ VLGSLL CR H + LA ++ K + E+DP + Y+ L++N+YAA RW + V
Sbjct: 392 NEVVLGSLLAACRTHGDVGLAERL-MKYLCEVDPGSDSNYV-LLSNIYAAVGRWDGASKV 449
Query: 470 RQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDI 529
R+KM +G+ K PG S ++++G +H+FVAGD T+ + IY L + ++ GY P+I
Sbjct: 450 RKKMKALGIHKKPGFSSIEMDGSIHEFVAGDKTHVETQNIYAMLDHLFLELRICGYVPEI 509
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
I+ ++ F I L+ Y G + A +VFE+ S WN MI G A +
Sbjct: 246 INRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKRSLVSWNSMIVGFALNGH 305
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
E+++ + M + PD +++ L+ C+ GL EG Q
Sbjct: 306 AEEALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVDEGLQ 346
>gi|359491264|ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 684
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 198/560 (35%), Positives = 302/560 (53%), Gaps = 43/560 (7%)
Query: 7 IPANPATSSKALTTRQIFSLL-QIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS 65
IP NP L Q FSLL R L QIH+Q++ S + A L+ Y+ +
Sbjct: 62 IPTNPIPID--LPNPQTFSLLLNQRPKLSPLQQIHAQVVTQALSSNASLTASLIHCYLCA 119
Query: 66 GYLINAHKVFEKTENPSTAI--WNQMIRGHARSETPEKSVYLYKQMID----KETEPDEY 119
NA +F+ +PS I WN MIR +++ ++ ++L+ +M+ + PDEY
Sbjct: 120 KNHPNARILFDHYPSPSPPIKLWNVMIRTYSKIRNSQEPIHLFLRMLTLDGPMQVVPDEY 179
Query: 120 TYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGC----A 175
T++F+++ C+ GE VHG V+ SG+ SN+++ +++N+ C V A
Sbjct: 180 TFTFVITSCSHQISLIYGEIVHGMVVKSGFESNLYVGNSVINM-------CSVFARMEDA 232
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
R +F+ M R V SW SLL GY K G++D A ++F+ MP RN VSW MISG G+
Sbjct: 233 RKVFNQMSERDVFSWTSLLGGYAKHGEMDRACELFNMMPVRNDVSWAVMISGFLGCGRYP 292
Query: 236 QALSLF-NEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVG-REPVLVS 293
+AL+ F N + RV ++ LV LSACA +G L G WIH Y+++ +G R+ +S
Sbjct: 293 EALTFFCNMLCDDRVNPNEAVLVCVLSACAHLGALDQGNWIHLYIDK---IGIRQSSNIS 349
Query: 294 LNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------- 343
ALI MYA CG I+ A VF + +R+ +S+TSMI+G + G ++AL
Sbjct: 350 --TALIDMYAKCGRIDCASRVFNGICKRDVLSFTSMISGLSYHGLGKDALRVFYQMLDEN 407
Query: 344 -----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEA 398
+T LGVL+ CSH G V+EG M WGI P+IEHYGC +DL RAG ++ A
Sbjct: 408 VMPNEITILGVLNGCSHSGLVEEGSSILANMESLWGIAPKIEHYGCYIDLLGRAGYLERA 467
Query: 399 FSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYA 458
+V+ MPM+P+ + +LL RIH+N L Q+ + ++ G L++N+YA
Sbjct: 468 LEVVKTMPMEPDIVIWRALLSASRIHHNVNLGEQIISH-IGQLKSSDHNGGEVLLSNLYA 526
Query: 459 AAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITM 518
+ RW+ V +R+ M+ PG SW+++NG++H+F D + Q I L EI
Sbjct: 527 SLGRWERVTEMRKLMVDRRSESSPGCSWIEVNGLVHEFRVADQLHPQIVEIRNKLNEILK 586
Query: 519 QAMQEGYKPDISELFLGIEE 538
+ Q GY + ++ + E
Sbjct: 587 RLSQIGYSANTMQVSFDLNE 606
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 190/559 (33%), Positives = 312/559 (55%), Gaps = 36/559 (6%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
M+ + I P N T L + S L+ + ++HS II +GF ++ L+
Sbjct: 101 MIAKGIAPPNNFTFPFLLNSCARLSSLEPGH------EVHSHIIKHGFESDLFVRNALIH 154
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y G L A +F+++ +N MI+G+A PE ++ L+ +M + PDE+T
Sbjct: 155 LYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFT 214
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLAS--GYCSNVFIRTNLMNLYLMSGGECG-VGCARL 177
+ L SVC+ G+Q+H +V + SN+ +++ ++++Y +CG + A
Sbjct: 215 FVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMY----AKCGLINIAER 270
Query: 178 LFDDM-PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
+F M ++S +W+S++ GY + G+I+ A K+F+ M R+V+SWT MISG +Q G+ +
Sbjct: 271 VFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSE 330
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
AL LF EM + D+V LVA LSACA +G LGK ++ EN + +L +
Sbjct: 331 ALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTA--- 387
Query: 297 ALIHMYASCGEIEEAYGVFRKMQR--RNTVSWTSMITGFAKQGYAQEAL----------- 343
A++ MYA CG I+ A +FR++ + + + SMI G A+ G + A+
Sbjct: 388 AVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGL 447
Query: 344 ----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAF 399
+TF+GVL AC H G ++EG++ FE M +GIKP++EHYGCMVDL R G ++EA+
Sbjct: 448 KPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAY 507
Query: 400 SLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAA 459
LVQ MP + N + +LL CR H N ++ QKL+ E++ + A Y+ L++N+ A
Sbjct: 508 DLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLL-EMEAQHGARYV-LLSNILAD 565
Query: 460 AKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
A +W++ VR+ M G+RKPPG S++++ G +H FVA D ++ Q I L ++ M+
Sbjct: 566 ANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMR 625
Query: 520 AMQEGYKPDISELFLGIEE 538
GY P+ +++ I+E
Sbjct: 626 LKSAGYVPNTAQVMFDIDE 644
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 222/473 (46%), Gaps = 89/473 (18%)
Query: 26 LLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY---LINAHKVFEKTENPS 82
LL+ + K QIH+Q I+NG + + +++L++F+ G L ++ +F + + P+
Sbjct: 15 LLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPN 74
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKE-TEPDEYTYSFLLSVCARCGLFREGEQVH 141
+WN MIRG++RS+ P +++ LY MI K P+ +T+ FLL+ CAR G +VH
Sbjct: 75 LFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVH 134
Query: 142 GRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRG 201
++ G+ S++F+R L++LY + G + AR LFD+ R +VS+N+++KGY
Sbjct: 135 SHIIKHGFESDLFVRNALIHLYSVFG---NLNLARTLFDESLVRDLVSYNTMIKGY---- 187
Query: 202 DIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALS 261
A+ + AL LF EM+ + + D+ VA S
Sbjct: 188 ---------------------------AEVNQPESALCLFGEMQNSGILPDEFTFVALFS 220
Query: 262 ACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYAS----------------- 304
C+ + + +GK IH+ V +N +L L +A++ MYA
Sbjct: 221 VCSVLNEPNVGKQIHAQVYKNLRSIDSNIL--LKSAIVDMYAKCGLINIAERVFSTMGTS 278
Query: 305 ---------------CGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------ 343
CGEI A +F M R+ +SWT+MI+G+++ G EAL
Sbjct: 279 KSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEM 338
Query: 344 ---------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGL 394
+T + VLSAC+ G D G++ + +N ++D++++ G
Sbjct: 339 EALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGS 398
Query: 395 MDEAFSLVQNMPMKPNDA-VLGSLLLGCRIHNNAELASQVAQKLVAE-IDPEQ 445
+D A + + + V S++ G H E A V ++L++ + P++
Sbjct: 399 IDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDE 451
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 169/381 (44%), Gaps = 56/381 (14%)
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPA 184
L + C F++G Q+H + + +G +F + L++ + + G + G+ +RLLF +
Sbjct: 13 LCLLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDC 72
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
++ WN++++GY + + P +V + +MI+
Sbjct: 73 PNLFMWNTMIRGYSRSDN-----------PREAIVLYMSMIA------------------ 103
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYAS 304
+ + L++CA + L+ G +HS++ ++ G E L + NALIH+Y+
Sbjct: 104 -KGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKH---GFESDLF-VRNALIHLYSV 158
Query: 305 CGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGV 349
G + A +F + R+ VS+ +MI G+A+ + AL TF+ +
Sbjct: 159 FGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVAL 218
Query: 350 LSACSHGGFVDEGRQFFECMNQNW-GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
S CS + G+Q + +N I I +VD++++ GL++ A + M
Sbjct: 219 FSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTS 278
Query: 409 PNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAA 468
+ A S++ C E+ VA+KL + + A+++ Y+ A + +
Sbjct: 279 KSAAAWSSMV--CGYARCGEI--NVARKLFNHMHERDVISWTAMISG-YSQAGQCSEALE 333
Query: 469 VRQKMIKMGVRKPPGQSWVQI 489
+ ++M +G+ KP + V +
Sbjct: 334 LFKEMEALGI-KPDEVTLVAV 353
>gi|296084925|emb|CBI28334.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 200/551 (36%), Positives = 320/551 (58%), Gaps = 56/551 (10%)
Query: 17 ALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY---LINAHK 73
A++T + S+L + L QIH+Q+I + +++L+AF SG L A
Sbjct: 3 AISTNPVVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASS 62
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMID--KETEPDEYTYSFLLSVCARC 131
VF + ++P++ I+ +I+G + + P +S+ LY +M+ + E++ +L C +
Sbjct: 63 VFSRIQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKL 122
Query: 132 GLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWN 191
F EG QVHG+VL + + F+ +++ +Y+ G + AR +FD MP R VVSWN
Sbjct: 123 LAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGE---IELARRVFDRMPNRDVVSWN 179
Query: 192 SLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL 251
S++ GY+K G+I+ A ++FDEMP R++VS MI +G ++ LSL GL
Sbjct: 180 SMIAGYLKAGEIELASELFDEMPERDLVSCNAMI-----DGYGKEMLSL---------GL 225
Query: 252 --DQVALVAALSACAEIGDLKLGKWIHSYVEEN---FSVGREPVLVSLNNALIHMYASCG 306
D A+V+ LSA A++G ++ GKW+H+YV N S G + +ALI MY+ CG
Sbjct: 226 RPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSG------FIGSALIDMYSKCG 279
Query: 307 EIEEAYGVFRKM-QRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVL 350
IE AY VFR + RRN W SMI+G A G A+EAL +TFLG+L
Sbjct: 280 YIENAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLL 339
Query: 351 SACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPN 410
S CSHGG V+EG+ +FE M++ + I PRI+HYGCM+DLF RAG +++A ++QNMP + +
Sbjct: 340 STCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEAD 399
Query: 411 DAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVR 470
++L H + E+ A + + E+ P+ ++ Y+ L++N+YA A RW DVA +R
Sbjct: 400 LLAWKAILSASMKHGHIEIGKSAALRAI-ELAPDDSSSYV-LLSNIYAKAGRWDDVAKIR 457
Query: 471 QKMIKMGVRKPPGQSWVQINGVLHDFVAG---DSTYKQASLIYKTLGEITMQAMQEGYKP 527
M + GV+K G S + +NG +H+F+ G DS+Y + + + E+ + +GY+P
Sbjct: 458 LMMRQRGVKKIAGCSSMLVNGKVHEFLLGKELDSSY--SGQVLAKIAEVVSRLKLQGYEP 515
Query: 528 DISELFLGIEE 538
D++++ L IE+
Sbjct: 516 DLTQVLLDIED 526
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 180/521 (34%), Positives = 288/521 (55%), Gaps = 35/521 (6%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
IH ++ F +I L+ FY + G L +A+ VF K WN MI G + +
Sbjct: 153 IHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGS 212
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
PE+++ L+K+M + P+ T +LS CA+ G + +G N+ +
Sbjct: 213 PEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNA 272
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
++++Y+ G + AR LFD M + +VSW +++ GY K GD D A ++FD MP ++
Sbjct: 273 MLDMYVKCGS---LEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDI 329
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRAR-VGLDQVALVAALSACAEIGDLKLGKWIHS 277
+W +IS QNGK ++AL++F E++ + ++V L + L+ACA++G + LG WIH
Sbjct: 330 TAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHV 389
Query: 278 YVEE-----NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
Y+++ NF + +LI MY+ CG +E+A VF ++RR+ W++MI G
Sbjct: 390 YIKKQGIKLNFHI---------TTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAG 440
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
A G+ + A+ +TF +L ACSH G VDEGR FF M +G+ P
Sbjct: 441 LAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVP 500
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
+HY CMVD+ RAG ++EA L++ MP+ P+ +V G+LL CRI+ N ELA +L
Sbjct: 501 GSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRL 560
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
+ E D Y+ L++N+YA A +W V+ +RQ M G+ K PG S +++NG++H+F+
Sbjct: 561 L-ETDSNNHGAYV-LLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFL 618
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
GD+++ ++ IY L EI + GY D S L +EE
Sbjct: 619 VGDNSHPLSTEIYSKLDEIVARIKSTGYVSDESHLLQFVEE 659
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 183/397 (46%), Gaps = 74/397 (18%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSG--YLINAHKVFEKTENPSTAIWNQMIR 91
K L Q+H+ ++ G KL S L A KVF++ P+ WN +IR
Sbjct: 44 KHLKQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIR 103
Query: 92 GHARSETPEKSVYLYKQMIDKETE-PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYC 150
A S P + + ++ QM+ + P+ YT+ F++ G+ +HG V+ + +
Sbjct: 104 AFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFG 163
Query: 151 SNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIF 210
S++FI +L++ Y G + A L+F + + +VSWNS++ G+V+ G + A ++F
Sbjct: 164 SDLFISNSLIHFYSSLG---DLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLF 220
Query: 211 DEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLK 270
M +M AR ++V +V LSACA+ DL+
Sbjct: 221 KRM-----------------------------KMENARP--NRVTMVGVLSACAKRIDLE 249
Query: 271 LGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMI 330
G+W Y+E N G + L+ L+NA++ MY CG +E+A +F KM+ ++ VSWT+MI
Sbjct: 250 FGRWACDYIERN---GIDINLI-LSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMI 305
Query: 331 TGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR--IEHYGCMVDL 388
G+AK G D R+ F+ M PR I + ++
Sbjct: 306 DGYAKVGD--------------------YDAARRVFDVM-------PREDITAWNALISS 338
Query: 389 FSRAGLMDEAFSLVQNMPM----KPNDAVLGSLLLGC 421
+ + G EA ++ + + + KPN+ L S L C
Sbjct: 339 YQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAAC 375
>gi|449445234|ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Cucumis sativus]
Length = 542
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 183/518 (35%), Positives = 299/518 (57%), Gaps = 34/518 (6%)
Query: 25 SLLQIRNTTKTLFQ---IHSQIIINGFSQKNYILAKLLAFYVTSGY--LINAHKVFEKTE 79
+L+ + + K++F+ IH+ + G SQ I +KLL F S L ++K+
Sbjct: 15 TLISLLDGCKSMFELKRIHALLFTLGISQDETIKSKLLLFSALSPARDLDYSYKLILNVP 74
Query: 80 NPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
NP+T WN +IR + ++ P S+ ++ +M+ PD TY FL+ ++ G
Sbjct: 75 NPTTFNWNTLIRAFSNTKNPNPSITVFIKMLQNGVSPDYLTYPFLVKATSKLLNQELGMA 134
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGEC-GVGCARLLFDDMPARSVVSWNSLLKGYV 198
VH ++ SG+ + FI+ +L+++Y C + AR +FD+MP +++V+WN++L GY
Sbjct: 135 VHVHIVKSGHEIDKFIQNSLIHMY----ASCRDIASARKVFDEMPRKNLVTWNAMLDGYA 190
Query: 199 KRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVA 258
K GD++ A ++F+ MP ++VVSW+++I G + +A++LF M ++V LV+
Sbjct: 191 KCGDLNMAREVFNLMPEKDVVSWSSLIDGYVKGRVYGEAMALFERMSFDGPMANEVTLVS 250
Query: 259 ALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFR-- 316
AL ACA +G L+ G+ +H Y+ EN P+ + L +L+ MYA CG I EA VFR
Sbjct: 251 ALCACAHLGALEHGRMMHRYIVEN----ELPLTIVLQTSLVDMYAKCGAIHEALTVFRAC 306
Query: 317 KMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDE 361
+Q + + W ++I G A G +EA+ +T+L +LS C+HGG V+E
Sbjct: 307 SLQEADVLIWNAIIGGLATHGLIKEAMNLFCEMKMVGIVPDEITYLCLLSCCAHGGLVEE 366
Query: 362 GRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGC 421
FF+C+ ++ G+ P++EHY CMVD SRAG + EA+ + MP++P ++LG+LL GC
Sbjct: 367 AWYFFDCLRKH-GMIPKVEHYACMVDALSRAGQVSEAYQFLCQMPVQPTSSMLGALLSGC 425
Query: 422 RIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKP 481
H ++A V ++LV E+DP Y+ L +N+YAA KRW D +R+ M + GV+K
Sbjct: 426 MKHGKLDIAKVVGRRLV-ELDPNHDGRYVGL-SNIYAADKRWDDAKNIREAMERKGVKKS 483
Query: 482 PGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
PG S++++ GVLH F+A D T+ I+ L I Q
Sbjct: 484 PGFSFIEVYGVLHRFMAHDKTHGDCEQIFMMLNLIVDQ 521
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 176/499 (35%), Positives = 293/499 (58%), Gaps = 28/499 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+I +I GF ++ ++ V+ G L+ A K+F+++ WN +I G+ R
Sbjct: 176 EILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCG 235
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ LY +M + PDE T ++S A+ G ++H + G V +
Sbjct: 236 LADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLAN 295
Query: 158 NLMNLYLMSGGEC-GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
LM++Y+ +C + A++LF++M ++VVSW +++ GY K G ++ A ++F+EMP +
Sbjct: 296 ALMDMYI----KCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEK 351
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
+VV W +I G Q +S++AL+LF+EM+ + V D++ +V LSAC+++G L +G W+H
Sbjct: 352 DVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMH 411
Query: 277 SYVEE-NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
YV++ N ++ V+L AL+ MYA CG I++A VF +M RN+++WT++I G A
Sbjct: 412 HYVDKHNLTMN-----VALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLAL 466
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
G A+ +TF+GVLSAC HGG VD+GR +F M +GI P+++
Sbjct: 467 HGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLK 526
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HY C+VDL RAG ++EA L+++MP +P+ V G+L G RIH N + + A KL+ E
Sbjct: 527 HYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLL-E 585
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
+DP Y+ L+AN+Y A W+ VR+ M + GV K PG S +++NG+++DF+ D
Sbjct: 586 LDPHDGGIYV-LLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRD 644
Query: 501 STYKQASLIYKTLGEITMQ 519
++ Q+ IY+ L +T Q
Sbjct: 645 KSHPQSEKIYECLTRLTRQ 663
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 217/481 (45%), Gaps = 89/481 (18%)
Query: 8 PANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY 67
P N S + + + SLL+ + + +IH+Q+I G + L++L+AF S +
Sbjct: 42 PTNWNASHVLIQSNPLLSLLEACTSMAKMKEIHAQMISTGLISDGFALSRLVAFCAISEW 101
Query: 68 --LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETE-PDEYTYSFL 124
L K+ N + WN IRG+ SE P +V LY+ M+ K + PD YTY L
Sbjct: 102 RNLDYCDKILNNAANLNVFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLL 161
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPA 184
VCA L ++ G V+ G+ S++F+ ++++ L+S GE + AR LFD+
Sbjct: 162 FKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHV-LVSCGE--LLAARKLFDESCV 218
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
R +VSWNS++ GYV+ G D A+ ++ +M NV+
Sbjct: 219 RDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMP------------------------ 254
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYAS 304
D+V ++ +SA A++ +L LG+ +H +EE +G + V L NAL+ MY
Sbjct: 255 -------DEVTMIGVVSASAQLENLALGRKLHQSIEE---MGLN-LTVPLANALMDMYIK 303
Query: 305 CGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------------------- 343
C IE A +F M ++ VSWT+M+ G+AK G + A+
Sbjct: 304 CKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGF 363
Query: 344 -------------------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
+T + LSACS G +D G ++++ +
Sbjct: 364 VQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKH-NLTMN 422
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
+ +VD++++ G + +A + + MP + N +++ G +H A +++
Sbjct: 423 VALGTALVDMYAKCGNIKKAIQVFEEMPGR-NSLTWTAIICGLALHGQPHAAISYFSEMI 481
Query: 439 A 439
+
Sbjct: 482 S 482
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 176/499 (35%), Positives = 293/499 (58%), Gaps = 28/499 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+I +I GF ++ ++ V+ G L+ A K+F+++ WN +I G+ R
Sbjct: 176 EILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCG 235
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ LY +M + PDE T ++S A+ G ++H + G V +
Sbjct: 236 LADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLAN 295
Query: 158 NLMNLYLMSGGEC-GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
LM++Y+ +C + A++LF++M ++VVSW +++ GY K G ++ A ++F+EMP +
Sbjct: 296 ALMDMYI----KCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEK 351
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
+VV W +I G Q +S++AL+LF+EM+ + V D++ +V LSAC+++G L +G W+H
Sbjct: 352 DVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMH 411
Query: 277 SYVEE-NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
YV++ N ++ V+L AL+ MYA CG I++A VF +M RN+++WT++I G A
Sbjct: 412 HYVDKHNLTMN-----VALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLAL 466
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
G A+ +TF+GVLSAC HGG VD+GR +F M +GI P+++
Sbjct: 467 HGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLK 526
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HY C+VDL RAG ++EA L+++MP +P+ V G+L G RIH N + + A KL+ E
Sbjct: 527 HYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLL-E 585
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
+DP Y+ L+AN+Y A W+ VR+ M + GV K PG S +++NG+++DF+ D
Sbjct: 586 LDPHDGGIYV-LLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRD 644
Query: 501 STYKQASLIYKTLGEITMQ 519
++ Q+ IY+ L +T Q
Sbjct: 645 KSHPQSEKIYECLTRLTRQ 663
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 217/481 (45%), Gaps = 89/481 (18%)
Query: 8 PANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY 67
P N S + + + SLL+ + + +IH+Q+I G + L++L+AF S +
Sbjct: 42 PTNWNASHVLIQSNPLLSLLEACTSMAKMKEIHAQMISTGLISDGFALSRLVAFCAISEW 101
Query: 68 --LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETE-PDEYTYSFL 124
L K+ N + WN IRG+ SE P +V LY+ M+ K + PD YTY L
Sbjct: 102 RNLDYCDKILNNAANLNXFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLL 161
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPA 184
VCA L ++ G V+ G+ S++F+ ++++ L+S GE + AR LFD+
Sbjct: 162 FKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHV-LVSCGE--LLAARKLFDESCV 218
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
R +VSWNS++ GYV+ G D A+ ++ +M NV+
Sbjct: 219 RDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMP------------------------ 254
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYAS 304
D+V ++ +SA A++ +L LG+ +H +EE +G + V L NAL+ MY
Sbjct: 255 -------DEVTMIGVVSASAQLENLALGRKLHQSIEE---MGLN-LTVPLANALMDMYIK 303
Query: 305 CGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------------------- 343
C IE A +F M ++ VSWT+M+ G+AK G + A+
Sbjct: 304 CKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGF 363
Query: 344 -------------------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
+T + LSACS G +D G ++++ +
Sbjct: 364 VQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKH-NLTMN 422
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
+ +VD++++ G + +A + + MP + N +++ G +H A +++
Sbjct: 423 VALGTALVDMYAKCGNIKKAIQVFEEMPGR-NSLTWTAIICGLALHGQPHAAISYFSEMI 481
Query: 439 A 439
+
Sbjct: 482 S 482
>gi|297740165|emb|CBI30347.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 184/500 (36%), Positives = 292/500 (58%), Gaps = 42/500 (8%)
Query: 19 TTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKT 78
TT I +LL+ TT TL Q+H++II G Q ++I+++ L + VF
Sbjct: 72 TTSSISTLLKACTTTSTLEQVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNGV 131
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR-CGLFREG 137
+PST +WN I+G++ + + +V L+ +M + PD++TY L+ C++ CG+ +EG
Sbjct: 132 SSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGV-KEG 190
Query: 138 EQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKG 196
HG + G +VF+ T+L++LY G+CG + CAR +FD+M R+VVSW +++ G
Sbjct: 191 VAFHGSAVRCGVGGDVFVMTSLIDLY----GKCGEILCARKVFDEMGERNVVSWTAMIAG 246
Query: 197 YVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM-RRAR------- 248
Y D+ A K+FDEMP +N VSW +ISG + G R A +F+EM R R
Sbjct: 247 YASFSDLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNRDVVAWSA 306
Query: 249 -----VGLDQVALVAALSACAEIGDLKLGKWIHSYVEE-NFSVGREPVLVSLNNALIHMY 302
V D+ +V+ +SAC+++G L+L KW+ YV + + V R V+ ALI M
Sbjct: 307 LISGNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIA----ALIDMN 362
Query: 303 ASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFL 347
A CG ++ A +F +M +R+ +S+ SM+ G + G +A+ + F
Sbjct: 363 AKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFT 422
Query: 348 GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM 407
+L+ACS G VDEG +FE M ++ I P +HY CMVDL RAG + EA+ L+++MP+
Sbjct: 423 VILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPV 482
Query: 408 KPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVA 467
+P+ G+LL C++H + EL VA +L E++P+ A Y+ L++N+YAAA++W DV+
Sbjct: 483 EPHAGAWGALLGACKLHCDIELGEVVADQLF-ELEPQNAGNYV-LLSNIYAAAEQWLDVS 540
Query: 468 AVRQKMIKMGVRKPPGQSWV 487
+R KM + G+RK PG SW+
Sbjct: 541 LLRNKMRERGIRKIPGCSWI 560
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 196/558 (35%), Positives = 307/558 (55%), Gaps = 64/558 (11%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKTENPSTAIWNQMIR 91
+ L QIH I +G +Y + KL+ S L A ++ P ++N ++R
Sbjct: 186 RALTQIHGFFIKSGVDTDSYFIGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVR 245
Query: 92 GHARSETPEKSVYLYKQMIDKE-TEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYC 150
G++ S+ P SV ++ +M+ K PD ++++F++ A R G Q+H + L G
Sbjct: 246 GYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLRTGFQMHCQALKHGLD 305
Query: 151 SNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMP-------------------------- 183
S++F+ T L+ +Y GECG VG AR +FD+MP
Sbjct: 306 SHLFVATTLIGMY----GECGCVGFARKVFDEMPQPNLVAWNAVVTACFRGNDVSGAREI 361
Query: 184 -----ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQAL 238
R+ SWN +L GY+K G+++ A +IF EMPHR+ VSW+TMI G + NG ++
Sbjct: 362 FDKMLVRNHTSWNVMLAGYIKAGELECAKRIFSEMPHRDDVSWSTMIVGFSHNGSFNESF 421
Query: 239 SLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEEN-FSVGREPVLVSLNNA 297
S F E+ RA + ++V+L LSAC++ G + GK +H +VE++ +S +VS+NNA
Sbjct: 422 SYFRELLRAEMRPNEVSLTGVLSACSQSGAFEFGKTLHGFVEKSGYS-----WIVSVNNA 476
Query: 298 LIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQGYAQEAL------------- 343
LI MY+ CG + A VF MQ +R+ VSWTSMI G A G+ +EA+
Sbjct: 477 LIDMYSRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGEEAIRIFNEMTESGVMP 536
Query: 344 --LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
++F+ +L ACSH G + EG +F M + + I+P +EHYGCMVDL+ R+G + +A+S
Sbjct: 537 DEISFISLLYACSHAGLIKEGEGYFSKMKRVYHIEPAVEHYGCMVDLYGRSGKLQKAYSF 596
Query: 402 VQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAK 461
+ MP+ P V +LL C H N ELA QV Q+L E+DP +G L L++NVYA A
Sbjct: 597 ICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRL-NELDPNN-SGDLVLLSNVYATAG 654
Query: 462 RWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAM 521
+W+DVA++R+ MI ++K S V++ ++ F A + + ++ L EI ++
Sbjct: 655 KWKDVASIRKSMIVQRIKKITAWSLVEVGKTMYKFTACEKKKEIDIEAHEKLKEIILRLR 714
Query: 522 QE-GYKPDISELFLGIEE 538
E GY P+++ +EE
Sbjct: 715 DEAGYAPEVASALYDVEE 732
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 175/516 (33%), Positives = 283/516 (54%), Gaps = 55/516 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH+ ++ GF ++ L+ Y GYL +AHKVF+ + + W +I G+
Sbjct: 133 KIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVG 192
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ +++++++ PD +T +LS C + G GE +H ++ G NVF+ T
Sbjct: 193 KFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGT 252
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
+L+++Y K G+++ A +FD MP ++
Sbjct: 253 SLVDMY----------------------------------AKCGNMEKARSVFDGMPEKD 278
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+VSW MI G A NG ++A+ LF +M+R V D +V LSACA +G L+LG+W+
Sbjct: 279 IVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSG 338
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
V+ N PVL ALI +YA CG + A+ VF+ M+ ++ V W ++I+G A G
Sbjct: 339 LVDRN-EFLYNPVL---GTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNG 394
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
Y + + TF+G+L C+H G VDEGR++F M + + + P IEHY
Sbjct: 395 YVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHY 454
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
GCMVDL RAGL+DEA L++NMPM+ N V G+LL CRIH + +LA ++A K + E++
Sbjct: 455 GCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLA-ELALKQLIELE 513
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P + Y+ L++N+Y+A +W + A VR M + ++KPPG SW++++G++H+F+ GD
Sbjct: 514 PWNSGNYV-LLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKY 572
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ + IY L E+T + GY P + IEE
Sbjct: 573 HPLSEKIYAKLDELTKKMKVAGYVPTTDFVLFDIEE 608
>gi|297739678|emb|CBI29860.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 190/533 (35%), Positives = 311/533 (58%), Gaps = 62/533 (11%)
Query: 22 QIFSLLQIRNTTKTLFQIHSQIIING--FSQKNYILAKLLAFYVTSGY--LINAHKVFEK 77
+I L++ + + L QIH++++ + S ++ L K++ F S Y + A K+F +
Sbjct: 59 RIALLIRKCRSMRVLRQIHARLLTHAMPISSISFGLCKIIGFCALSPYGDIDYARKLFSQ 118
Query: 78 TENPSTAIWNQMIRGHARSETPEKS-VYLYKQMIDK-ETEPDEYTYSFLLSVCARCGLFR 135
+ P+ WN MIRG ++S+TP K V L+++M+ + P+ +T +F+L C+
Sbjct: 119 IQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALE 178
Query: 136 EGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLK 195
EG+QVH VL SG+ S+ F+ T L+N Y
Sbjct: 179 EGQQVHANVLKSGFGSSPFVETALVNFY-------------------------------- 206
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVA 255
K DI A K+FDE+ RN+V+W+TMISG A+ G +AL LF +M++A V D+V
Sbjct: 207 --AKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVT 264
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
+V+ +SACA G L GKW+H+Y+ + + L+ AL++MYA CG IE A VF
Sbjct: 265 MVSVISACAASGALDTGKWVHAYINKQLI----ETDLELSTALVNMYAKCGCIERAKEVF 320
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVD 360
M ++T +W+SMI G A G A++AL +TF+GVLSAC+H G V
Sbjct: 321 DAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVS 380
Query: 361 EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
EGR+++ M + +GI P +E YGCMVDL RA L+++A +LV+ MP+ PN + +LL+G
Sbjct: 381 EGRRYWSSMLE-FGIVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVG 439
Query: 421 CRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRK 480
C+ N + + VAQ+L+ E++P A Y+ L++N+YA+ +W+ ++ VR+KM MG++
Sbjct: 440 CKKSKNLDKSEVVAQRLL-ELEPHNAENYI-LLSNLYASMSQWEKMSQVRKKMKGMGIKA 497
Query: 481 PPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELF 533
PG S ++++G++H+FV GD ++ +A + + L +I+ + G++P IS++
Sbjct: 498 VPGCSSIEVDGLVHEFVMGDWSHPEAMEVREILRDISKRVHAVGHQPGISDVL 550
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 186/506 (36%), Positives = 286/506 (56%), Gaps = 30/506 (5%)
Query: 36 LFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHAR 95
L QI + + NG ++ LL + AHK+F+ P+ ++N++I+ ++
Sbjct: 4 LKQIQAYTLRNGIEHTKQLIVSLLQI----PSIPYAHKLFDFIPKPTVFLYNKLIQAYSS 59
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
+ LY QM + P+E++++FL S CA ++G +H + SG+ +VF
Sbjct: 60 HGPHHQCFSLYTQMCLQGCSPNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCDVFA 119
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
T L+++Y G + AR FD+M R V +WNS++ GY + GD++GA ++F MP
Sbjct: 120 LTALVDMYAKLGL---LSLARKQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFRLMPA 176
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRR-ARVGLDQVALVAALSACAEIGDLKLGKW 274
RNV SWT MISG AQNG+ +ALS+F M + ++V L + L ACA +G L++G+
Sbjct: 177 RNVTSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEVGER 236
Query: 275 IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGF 333
I Y N + ++NAL+ MYA CG I++A+GVF ++ RRN SW SMI G
Sbjct: 237 IEVYARGNGYFKN----LYVSNALLEMYARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGL 292
Query: 334 AKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
A G EA+ +TF+GVL AC+HGG V EG+ FFE M +++ I P+
Sbjct: 293 AVHGRCDEAIELFYKMLREGAAPDDVTFVGVLLACTHGGMVVEGQHFFESMERDFSIAPK 352
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
+EHYGCMVDL RAG + EA L+ MPM+P+ V G+LL C H + ELA + A L
Sbjct: 353 LEHYGCMVDLLGRAGELREAHDLILRMPMEPDSVVWGTLLGACSFHGHVELAEKAAGALF 412
Query: 439 AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVA 498
E++P Y+ +++N+YA A RW VA +R+ M + K G S+++ G +H F+
Sbjct: 413 -ELEPSNPGNYV-ILSNIYATAGRWDGVARLRKLMKGGKITKAAGYSFIEEGGHIHKFIV 470
Query: 499 GDSTYKQASLIYKTLGEITMQAMQEG 524
D ++ ++ IY L E++M+ G
Sbjct: 471 EDRSHSRSDEIYALLDEVSMKMKLHG 496
>gi|357153639|ref|XP_003576518.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Brachypodium distachyon]
Length = 538
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 188/479 (39%), Positives = 292/479 (60%), Gaps = 31/479 (6%)
Query: 36 LFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPS--------TAIWN 87
L Q+H+Q+++NGF +K +++AKLL+ + L A +F +PS T
Sbjct: 60 LDQLHAQLLLNGFHRKRFLVAKLLSLAAAAADLPRAESLFLSASSPSCPHHLHPPTLANL 119
Query: 88 QMIRGHARSETPEKSVYLYKQMIDKET-EPDEYTYS--FLLSVCARCGLFREGEQVHGRV 144
+ A P + +YL+ +++ + P+ +++S A G G +H
Sbjct: 120 LLRAAAASRAPPRQLLYLFSRLVGRHGFRPNAFSFSTLLAALADAGAGALPHGPALHASA 179
Query: 145 LASGYC-SNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDI 203
LA+G S+ + T+L+++Y +G +G A +FD+MP R+V +WN +L YV+ G++
Sbjct: 180 LATGLAQSSSHVMTSLLDMYATAGQ---LGDAGKVFDEMPERTVAAWNCMLSAYVRCGEV 236
Query: 204 DGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSAC 263
D A F EMP R+ V+WTT+I+GCA G++ +A+ LF MR+ARV D V +VA L+AC
Sbjct: 237 DAALHFFGEMPGRDAVAWTTVIAGCANAGRAAEAVDLFWRMRKARVKDDAVTMVALLTAC 296
Query: 264 AEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNT 323
AE+GDL+LG+W+H+ V+++ G++ +V L+NALIHMY CG +E+A+ +F +M RR+T
Sbjct: 297 AELGDLQLGRWVHARVDQD---GQDQRIVLLDNALIHMYVRCGAVEDAHCMFLRMPRRST 353
Query: 324 VSWTSMITGFAKQGYAQEAL------------LTFLGVLSACSHGGFVDEGRQFFECMNQ 371
VSWT+MI+G A G A+EAL T L VL ACSH G VD ++FE M +
Sbjct: 354 VSWTTMISGLAIHGRAEEALELFRRMEERPDGATLLAVLWACSHSGKVDFAWRYFESMER 413
Query: 372 NWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELAS 431
+GI P I HYGCMVD+ R+ + EA L + MP++ N+AV G+LL GC+ N EL++
Sbjct: 414 LYGITPEIHHYGCMVDMLCRSRRLYEALELAETMPLQSNEAVWGALLSGCKREGNLELSA 473
Query: 432 QVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQIN 490
+V +L+ E+ P +A G+L L++N+YAA +W+ VR+++ M KP G SWV N
Sbjct: 474 KVVDRLI-ELQPNRAVGHLVLLSNMYAAVGQWEQAQMVRERVAAMNSGKPAGGSWVNPN 531
>gi|297793123|ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310281|gb|EFH40705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 531
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 194/516 (37%), Positives = 303/516 (58%), Gaps = 34/516 (6%)
Query: 27 LQIRNTT-KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI 85
L+I T KTL Q H +II G ++ N +AK + +G+L A+ VF P+T +
Sbjct: 21 LKIHGTNLKTLKQSHCFMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPFPNTYL 80
Query: 86 WNQMIRGHARSETPEKSVY-----LYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
N MIR A S E++ + +Y++ +PD +T+ F+L + R G QV
Sbjct: 81 HNTMIR--ALSLVDERNAHSIAITVYRKFWAFCAKPDTFTFPFVLKIVVRVSDVWFGRQV 138
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKR 200
HG+ + G+ S+V + T L+ +Y GG +G AR +FD+M R V WN+LL GY K
Sbjct: 139 HGQAVVFGFDSSVHVVTGLIQMYSSCGG---LGDARKVFDEMRVRDVNVWNALLAGYGKV 195
Query: 201 GDIDGAWKIFDEMPH--RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVA 258
G++D A + + MP RN VSWT +ISG A++G++ +A+ +F M V D+V L+A
Sbjct: 196 GEMDEARGLLEMMPCWVRNAVSWTCVISGYARSGRASEAIEVFQRMLMENVDPDEVTLLA 255
Query: 259 ALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM 318
LSACA++G L+LG+ I SYV+ + R VSLNNA+I MYA G I +A VF +
Sbjct: 256 VLSACADLGSLELGERICSYVDHR-GMNRA---VSLNNAVIDMYAKSGNITKALEVFESV 311
Query: 319 QRRNTVSWTSMITGFAKQGYAQEALL---------------TFLGVLSACSHGGFVDEGR 363
RN V+WT++ITG A G+ EAL+ TF+ +LSACSH G+VD G
Sbjct: 312 NERNVVTWTTIITGLATHGHGAEALVMFDRMVKAGVKPNDVTFIAILSACSHVGWVDLGN 371
Query: 364 QFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRI 423
+FF M +GI P IEHYGCM+DL RAG + EA ++++MP + N A+ GSLL +
Sbjct: 372 RFFNSMRSKYGINPNIEHYGCMIDLLGRAGKLREAEEVIKSMPFESNAAIWGSLLAASNV 431
Query: 424 HNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPG 483
H++ ++ + +L+ +++P + Y+ L+AN+Y+ RW + +R+ M +GV+K G
Sbjct: 432 HHDIDVGERALYQLI-KLEPNNSGNYM-LLANLYSNLGRWDESRMMRKMMKGIGVKKLAG 489
Query: 484 QSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
+S +++ ++ F++GD ++ Q I++ L E+ +Q
Sbjct: 490 ESSIEVENRVYKFISGDLSHPQVEKIHELLQEMDLQ 525
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 188/521 (36%), Positives = 305/521 (58%), Gaps = 62/521 (11%)
Query: 34 KTLFQIHSQIIING--FSQKNYILAKLLAFYVTSGY--LINAHKVFEKTENPSTAIWNQM 89
+ L QIH++++ + S ++ L K++ F S Y + A K+F + + P+ WN M
Sbjct: 2 RVLRQIHARLLTHAMPISSISFGLCKIIGFCALSPYGDIDYARKLFSQIQRPNIFSWNSM 61
Query: 90 IRGHARSETPEKS-VYLYKQMIDK-ETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLAS 147
IRG ++S+TP K V L+++M+ + P+ +T +F+L C+ EG+QVH VL S
Sbjct: 62 IRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQVHANVLKS 121
Query: 148 GYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAW 207
G+ S+ F+ T L+N Y K DI A
Sbjct: 122 GFGSSPFVETALVNFY----------------------------------AKCEDIVLAS 147
Query: 208 KIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIG 267
K+FDE+ RN+V+W+TMISG A+ G +AL LF +M++A V D+V +V+ +SACA G
Sbjct: 148 KVFDEITDRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASG 207
Query: 268 DLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
L GKW+H+Y+ + + L+ AL++MYA CG IE A VF M ++T +W+
Sbjct: 208 ALDTGKWVHAYINKQLI----ETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWS 263
Query: 328 SMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQN 372
SMI G A G A++AL +TF+GVLSAC+H G V EGR+++ M +
Sbjct: 264 SMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLE- 322
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQ 432
+GI P +E YGCMVDL RA L+++A +LV+ MP+ PN + +LL+GC+ N + +
Sbjct: 323 FGIVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLDKSEV 382
Query: 433 VAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGV 492
VAQ+L+ E++P A Y+ L++N+YA+ +W+ ++ VR+KM MG++ PG S ++++G+
Sbjct: 383 VAQRLL-ELEPHNAENYI-LLSNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIEVDGL 440
Query: 493 LHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELF 533
+H+FV GD ++ +A + + L +I+ + G++P IS++
Sbjct: 441 VHEFVMGDWSHPEAMEVREILRDISKRVHAVGHQPGISDVL 481
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 190/516 (36%), Positives = 296/516 (57%), Gaps = 26/516 (5%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H I G ++ L+A YV G + A K+F+ + + WN MI G+A
Sbjct: 110 VHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIGGYAHMGN 169
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
+++ L+++M + EPD +T+ LLSVC++ G VH + +G ++ +R
Sbjct: 170 WKEAFLLFRKMREWGMEPDGFTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNA 229
Query: 159 LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y +CG + A+ +FD ++VVSW S++ Y + G I+ A +IFD+MP +N
Sbjct: 230 LVDMY----AKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKN 285
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VVSW +MIS + G+ R+AL LFN+MR +RV D+ LV+ L+AC+++GDL +GK IH+
Sbjct: 286 VVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHN 345
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y+ N + V+L N+LI MYA CG + A +F +M +N VSW +I A G
Sbjct: 346 YILSN----KGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHG 401
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
EA+ +T G+LSACSH G VD G +F+ M + + IEHY
Sbjct: 402 CGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVPREIEHY 461
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
CMVDL R GL+ EA L+ MPMKP+ V G+LL CRIH N E+ Q+ ++L+ E++
Sbjct: 462 ACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLL-ELE 520
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P + G L++N+Y A+RW+DV +R+ MI G++K S ++I+G +++F+ D
Sbjct: 521 P-HSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKKGRAISSIEIDGCIYEFMVDDKR 579
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+K +S IY L ++T GY +IS +F EE
Sbjct: 580 HKISSSIYAMLDQLTDHLRSAGYLCNISSVFFEAEE 615
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 195/403 (48%), Gaps = 80/403 (19%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVT--SGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
+H+QII++G + + L KL++F +G L A ++F++ P+ ++N +IRG++ S
Sbjct: 7 LHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGYSNS 66
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
+ P +V L+++MI P+E+T F+L C + E VHG + G S VF++
Sbjct: 67 DDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLVFVQ 126
Query: 157 TNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
L+ +Y++ CG + CAR LFDD+ +++VSWNS++ GY G+ WK
Sbjct: 127 NALIAVYVV----CGLIHCARKLFDDITDKTLVSWNSMIGGYAHMGN----WK------- 171
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
+A LF +MR + D V LS C++ DL LG+++
Sbjct: 172 --------------------EAFLLFRKMREWGMEPDGFTFVNLLSVCSQSRDLDLGRYV 211
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
H +E + + + + NAL+ MYA CG + A +F + Q +N VSWTSMI+ +A+
Sbjct: 212 HFCIE----ITGVKIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQ 267
Query: 336 QGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLM 395
G + A RQ F+ M + + M+ + R G
Sbjct: 268 HGSIEVA--------------------RQIFDQMPGK-----NVVSWNSMISCYLREGQY 302
Query: 396 DEAFSL---VQNMPMKPNDAV----------LGSLLLGCRIHN 425
EA L ++N + P++A LG L++G +IHN
Sbjct: 303 REALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHN 345
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH+ I+ N + + L+ Y G ++ A +F + + WN +I A
Sbjct: 342 KIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHG 401
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+++ L+++M T PDE T + LLS C+ GL G
Sbjct: 402 CGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMG 441
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 194/576 (33%), Positives = 298/576 (51%), Gaps = 85/576 (14%)
Query: 32 TTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIR 91
T+K + QI +QII NGF YI KL+ T + A ++F++ +P+ A+WN M R
Sbjct: 113 TSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFR 172
Query: 92 GHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGY-- 149
G+A+SE+ + V+L+ QM + P+ +T+ +L C + EGEQVH ++ G+
Sbjct: 173 GYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRG 232
Query: 150 -------------------------CS----NVFIRTNLMNLYLMS-------------- 166
C NV T+++N Y++S
Sbjct: 233 NPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAP 292
Query: 167 ----------------GGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIF 210
GG+ + AR LF +MP R V+ WN++LKGY G+++ +F
Sbjct: 293 ERDVVLWNIMVSGYIEGGD--MVEARKLFXEMPNRDVMFWNTVLKGYATNGNVEALEGLF 350
Query: 211 DEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM-RRARVGLDQVALVAALSACAEIGDL 269
+EMP RN+ SW +I G A NG + L F M + V + LV LSACA +G L
Sbjct: 351 EEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGAL 410
Query: 270 KLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSM 329
LGKW+H Y E + G V + NAL+ MYA CG IE A VFR M ++ +SW ++
Sbjct: 411 DLGKWVHVYAESSGLKGN----VYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTL 466
Query: 330 ITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWG 374
I G A +AL +TF+G+L AC+H G V++G +F+ M ++
Sbjct: 467 IGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYL 526
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVA 434
I P+IEHYGCMVD+ +RAG +++A + V+ MP++ + + LL CRI+ N ELA
Sbjct: 527 IMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLLGACRIYKNVELAELAL 586
Query: 435 QKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLH 494
Q+L+ E++P+ A Y+ L +N+Y A RW+DVA ++ M G +K PG S +++N +
Sbjct: 587 QRLI-ELEPKNPANYVML-SNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEVNDAVV 644
Query: 495 DFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
+F + D + Q IY L + GY PD++
Sbjct: 645 EFYSLDERHPQIEEIYGVLRGLVKVLRSFGYVPDLT 680
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 53/137 (38%), Gaps = 6/137 (4%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
ML E +P N AT L+ L + +H +G Y+ L+
Sbjct: 384 MLSESDVPPNDATLVTVLSACARLGALDLGK------WVHVYAESSGLKGNVYVGNALMD 437
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y G + NA VF + WN +I G A ++ L+ QM + +PD T
Sbjct: 438 MYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGIT 497
Query: 121 YSFLLSVCARCGLFREG 137
+ +L C GL +G
Sbjct: 498 FIGILCACTHMGLVEDG 514
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 184/535 (34%), Positives = 292/535 (54%), Gaps = 35/535 (6%)
Query: 26 LLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI 85
L+ +T L QIH+ ++ G + KL Y + G+L ++ +F +T NP+ +
Sbjct: 29 LIDNSKSTHHLLQIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFL 88
Query: 86 WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVL 145
W +I HA + ++ Y QM+ +P+ +T S LL C VH +
Sbjct: 89 WTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKACT----LHPARAVHSHAI 144
Query: 146 ASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDG 205
G S++++ T L++ Y G V A+ LFD MP RS+VS+ ++L Y K G +
Sbjct: 145 KFGLSSHLYVSTGLVDAYARGGD---VASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPE 201
Query: 206 AWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRA-------RVGLDQVALVA 258
A +F+ M ++VV W MI G AQ+G +AL F +M +V +++ +VA
Sbjct: 202 ARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVA 261
Query: 259 ALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM 318
LS+C ++G L+ GKW+HSYVE N V V + AL+ MY CG +E+A VF M
Sbjct: 262 VLSSCGQVGALECGKWVHSYVENNGI----KVNVRVGTALVDMYCKCGSLEDARKVFDVM 317
Query: 319 QRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGR 363
+ ++ V+W SMI G+ G++ EAL +TF+ VL+AC+H G V +G
Sbjct: 318 EGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGW 377
Query: 364 QFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRI 423
+ F+ M +G++P++EHYGCMV+L RAG M EA+ LV++M ++P+ + G+LL CRI
Sbjct: 378 EVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRI 437
Query: 424 HNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPG 483
H+N L ++A+ LV+ + ++G L++N+YAAA+ W VA VR M GV K PG
Sbjct: 438 HSNVSLGEEIAEILVS--NGLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPG 495
Query: 484 QSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
S +++ +H+FVAGD + ++ IY L ++ + Y P + I E
Sbjct: 496 CSSIEVKNRVHEFVAGDRRHPRSKDIYSMLEKMNGWLKERHYTPKTDAVLHDIGE 550
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 172/447 (38%), Positives = 275/447 (61%), Gaps = 28/447 (6%)
Query: 109 MIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGG 168
M+ K +P+++T S ++ CA +G+Q H ++ G+ S+V ++T L+++Y G
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 169 ECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGC 228
G +FD M RS +WN+++ G+ + D+ A K+F EM R+VVSWT +I+G
Sbjct: 61 LEDAG---HVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGY 117
Query: 229 AQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV-EENFSVGR 287
AQNG ++L++FN+MR+ + D+ + + LSACA++ L+LG+ H+YV + F++
Sbjct: 118 AQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALD- 176
Query: 288 EPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALL--- 344
+ + +AL+ MYA G +E+A VF KM +RN VSW S+ITG A+ G +A+L
Sbjct: 177 ----IVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFE 232
Query: 345 ------------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRA 392
+F+GVLSACSH G V+EGR +F M QN+GI P + HY CM+DL RA
Sbjct: 233 QMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRA 292
Query: 393 GLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA-EIDPEQAAGYLA 451
G +DEA + + MP++P+ +V G+LL CRIH N ELA ++A+ L+ E+ Q AG
Sbjct: 293 GCLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEV---QIAGIYV 349
Query: 452 LVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYK 511
L++N+YAAA +W D A VR+ M GV K PG SW+++ ++H FVAG++++ Q I++
Sbjct: 350 LLSNIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHE 409
Query: 512 TLGEITMQAMQEGYKPDISELFLGIEE 538
L ++ + GY P+ + + +E+
Sbjct: 410 FLESLSRKMKAAGYVPNKNFVLQDVED 436
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 139/325 (42%), Gaps = 69/325 (21%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q H+ II GF + L+ Y G L +A VF+K ST WN MI GHA++
Sbjct: 31 QAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKMSERSTRTWNAMITGHAQNR 90
Query: 98 TPEKSVYLYKQMIDKET-------------------------------EPDEYTYSFLLS 126
+K++ L+ +M +++ + D + +LS
Sbjct: 91 DMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLS 150
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARS 186
CA G Q H V+ SG+ ++ + + L+++Y SG + A +FD MP R+
Sbjct: 151 ACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSG---SMEDACQVFDKMPQRN 207
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
VSWNS+ I+GCAQ+G+ A+ LF +M +
Sbjct: 208 EVSWNSI-------------------------------ITGCAQHGRGNDAVLLFEQMLQ 236
Query: 247 ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCG 306
A + ++++ V LSAC+ G + G+ + + +N+ + + VS +I + G
Sbjct: 237 AGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPD---VSHYTCMIDLLGRAG 293
Query: 307 EIEEAYGVFRKMQRRNTVS-WTSMI 330
++EA M VS W +++
Sbjct: 294 CLDEAENFINGMPVEPDVSVWGALL 318
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 5/178 (2%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q H+ ++ +GF+ + + L+ Y SG + +A +VF+K + WN +I G A+
Sbjct: 163 QFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHG 222
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLAS-GYCSNVFIR 156
+V L++QM+ +P+E ++ +LS C+ GL EG + + G +V
Sbjct: 223 RGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHY 282
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVS-WNSLLKGYVKRGDIDGAWKIFDEM 213
T +++L +G C + A + MP VS W +LL G+ + A +I + +
Sbjct: 283 TCMIDLLGRAG--C-LDEAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHL 337
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 193/562 (34%), Positives = 312/562 (55%), Gaps = 54/562 (9%)
Query: 25 SLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKTENPS 82
SLL + K L Q+H+ + G I KLL S L A ++F NP
Sbjct: 10 SLLTNCRSLKNLKQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPNPD 69
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEP-DEYTYSFLLSVCARCGLFREGEQVH 141
+ N +IRG A S+TP+ S+ + +M + T P D ++++FLL A G Q+H
Sbjct: 70 VFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQLH 129
Query: 142 GRVLASGYCSNVFIRTNLMNLYLMSGG---------------------------ECG-VG 173
+ + G +++F+ T L+++Y G CG V
Sbjct: 130 CQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCGDVK 189
Query: 174 CARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGK 233
A ++F+ MP R++ SWN +L GY K G+++ A K+F EMP ++ VSW+TMI G A NG
Sbjct: 190 GADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNGF 249
Query: 234 SRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVS 293
+A F E+++ + ++V+L ALSACA+ G ++ GK +H ++E++ + +VS
Sbjct: 250 FYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLW----MVS 305
Query: 294 LNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAKQGYAQEAL--------- 343
+NNAL+ Y+ CG + A VF +M ++R+ VSWTSMI G A GY +EA+
Sbjct: 306 VNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEES 365
Query: 344 ------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDE 397
+ F+ +L ACSH G +++G ++F M + I+P IEHYGCMVDL+ RAG +D+
Sbjct: 366 GIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDK 425
Query: 398 AFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVY 457
A+ + +MP+ P + +LL C IH N +LA +V ++L +E+DP + ++ L++N+Y
Sbjct: 426 AYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERL-SELDPNNSGDHV-LLSNIY 483
Query: 458 AAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEIT 517
A A +W+DVAAVR+ M + K PG S ++++ +++ FVAG+ Y+ L EI
Sbjct: 484 AVAGKWKDVAAVRRSMTDQRMNKTPGWSMIEVDKIMYSFVAGEVQNSITEEAYEKLKEIM 543
Query: 518 MQAMQEG-YKPDISELFLGIEE 538
++ EG Y P++ + IE+
Sbjct: 544 LKLRVEGCYIPEVGSVLHDIED 565
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 182/511 (35%), Positives = 279/511 (54%), Gaps = 58/511 (11%)
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
A F +NP+ ++N +IRG E+++ Y M+ P Y++S L+ C
Sbjct: 29 AASAFANVQNPNVLVFNALIRGCVHCCYSEQALVHYMHMLRNNVMPTSYSFSSLIKACTL 88
Query: 131 CGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSW 190
GE VHG V G+ S+VF++T L+ Y G VG +R +FDDMP R V +W
Sbjct: 89 LVDSAFGEAVHGHVWKHGFDSHVFVQTTLIEFYSTFGD---VGGSRRVFDDMPERDVFAW 145
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM------ 244
+++ +V+ GD+ A ++FDEMP +NV +W MI G + G + A LFN+M
Sbjct: 146 TTMISAHVRDGDMASAGRLFDEMPEKNVATWNAMIDGYGKLGNAESAEFLFNQMPARDII 205
Query: 245 ----------RRAR----VGL-----------DQVALVAALSACAEIGDLKLGKWIHSY- 278
R R + L D+V + +SACA +G L LGK +H Y
Sbjct: 206 SWTTMMNCYSRNKRYKEVIALFHDVIDKGMIPDEVTMTTVISACAHLGALALGKEVHLYL 265
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
V + F + V + ++LI MYA CG I+ A VF K+Q +N W +I G A GY
Sbjct: 266 VLQGFDLD-----VYIGSSLIDMYAKCGSIDMALLVFYKLQTKNLFCWNCIIDGLATHGY 320
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
+EAL +TF+ +L+AC+H GF++EGR++F M Q++ I P++EHYG
Sbjct: 321 VEEALRMFGEMERKRIRPNAVTFISILTACTHAGFIEEGRRWFMSMVQDYCIAPQVEHYG 380
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
CMVDL S+AGL+++A +++NM ++PN + G+LL GC++H N E+A Q L+ ++P
Sbjct: 381 CMVDLLSKAGLLEDALEMIRNMTVEPNSFIWGALLNGCKLHKNLEIAHIAVQNLMV-LEP 439
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKP-PGQSWVQINGVLHDFVAGDST 502
+G+ +L+ N+YA RW +VA +R M +GV K PG SWV+IN +H F A D+
Sbjct: 440 SN-SGHYSLLVNMYAEENRWNEVAKIRTTMKDLGVEKRCPGSSWVEINKTVHLFAASDTY 498
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELF 533
+ S ++ L E+ Q GY P++ +
Sbjct: 499 HPSYSQLHLLLAELDDQLRLAGYVPELGSIL 529
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 134/309 (43%), Gaps = 73/309 (23%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQM-------- 109
+++ +V G + +A ++F++ + A WN MI G+ + E + +L+ QM
Sbjct: 148 MISAHVRDGDMASAGRLFDEMPEKNVATWNAMIDGYGKLGNAESAEFLFNQMPARDIISW 207
Query: 110 -----------------------IDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLA 146
IDK PDE T + ++S CA G G++VH ++
Sbjct: 208 TTMMNCYSRNKRYKEVIALFHDVIDKGMIPDEVTMTTVISACAHLGALALGKEVHLYLVL 267
Query: 147 SGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDG 205
G+ +V+I ++L+++Y +CG + A L+F + +++ WN ++ G G ++
Sbjct: 268 QGFDLDVYIGSSLIDMY----AKCGSIDMALLVFYKLQTKNLFCWNCIIDGLATHGYVEE 323
Query: 206 AWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAE 265
A ++F E M R R+ + V ++ L+AC
Sbjct: 324 ALRMFGE-------------------------------MERKRIRPNAVTFISILTACTH 352
Query: 266 IGDLKLG-KWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNT 323
G ++ G +W S V++ + + + V ++ + + G +E+A + R M N+
Sbjct: 353 AGFIEEGRRWFMSMVQD-YCIAPQ---VEHYGCMVDLLSKAGLLEDALEMIRNMTVEPNS 408
Query: 324 VSWTSMITG 332
W +++ G
Sbjct: 409 FIWGALLNG 417
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 90/224 (40%), Gaps = 33/224 (14%)
Query: 203 IDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSA 262
I+ A F + + NV+ + +I GC S QAL + M R V + + + A
Sbjct: 26 INLAASAFANVQNPNVLVFNALIRGCVHCCYSEQALVHYMHMLRNNVMPTSYSFSSLIKA 85
Query: 263 CAEIGDLKLGKWIHSYV-EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR 321
C + D G+ +H +V + F V + LI Y++ G++ + VF M R
Sbjct: 86 CTLLVDSAFGEAVHGHVWKHGFDSH-----VFVQTTLIEFYSTFGDVGGSRRVFDDMPER 140
Query: 322 NTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
+ +WT+MI+ + G A GR F E +N +
Sbjct: 141 DVFAWTTMISAHVRDGDMASA-------------------GRLFDEMPEKN------VAT 175
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHN 425
+ M+D + + G + A L MP + D + + ++ C N
Sbjct: 176 WNAMIDGYGKLGNAESAEFLFNQMPAR--DIISWTTMMNCYSRN 217
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H +++ GF YI + L+ Y G + A VF K + + WN +I G A
Sbjct: 260 EVHLYLVLQGFDLDVYIGSSLIDMYAKCGSIDMALLVFYKLQTKNLFCWNCIIDGLATHG 319
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
E+++ ++ +M K P+ T+ +L+ C G EG +
Sbjct: 320 YVEEALRMFGEMERKRIRPNAVTFISILTACTHAGFIEEGRR 361
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 175/502 (34%), Positives = 292/502 (58%), Gaps = 26/502 (5%)
Query: 47 GFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLY 106
GFS +++ + F+ G + A ++F+++ WN +I G+ RS P +++ L+
Sbjct: 151 GFSADVFVVNAAMHFWSVRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELF 210
Query: 107 KQMID--KETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYL 164
++ + PDE T +S CA+ G G+++H V G V + +M++Y+
Sbjct: 211 WRLAEDGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYV 270
Query: 165 MSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTM 224
G + A +F+ + R+ VSW +++ G+ + G ++ A +FDEMP R+V W +
Sbjct: 271 KCGS---LELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNAL 327
Query: 225 ISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFS 284
++G QN + ++A++LF+EM++++V +++ +V LSAC+++G L++G W+H Y++ +
Sbjct: 328 MAGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRH-- 385
Query: 285 VGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL- 343
+ + V+L +L+ MYA CG I++A VF ++ +N ++WTSMI G A G+A EA+
Sbjct: 386 --KLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQNALTWTSMICGLANHGHADEAIE 443
Query: 344 --------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLF 389
+TF+GVLSAC H G V+ GRQFF M+ + ++ +++HY CM+DL
Sbjct: 444 YFQRMIDLGLQPDEITFIGVLSACCHAGLVEAGRQFFSLMHAKYHLERKMKHYSCMIDLL 503
Query: 390 SRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGY 449
RAG +DEA LV MPM P+ V G+L CR+H N L + A KLV E+DP + Y
Sbjct: 504 GRAGHLDEAEQLVNAMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLV-ELDPSDSGIY 562
Query: 450 LALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLI 509
+ L+AN+YA A + VR M +GV K PG S +++NGV+H+F+ D ++ + I
Sbjct: 563 V-LLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHLDTNAI 621
Query: 510 YKTLGEITMQAMQEGYKPDISE 531
Y L EIT+Q DISE
Sbjct: 622 YDCLHEITLQMRHIANLIDISE 643
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 113/466 (24%), Positives = 204/466 (43%), Gaps = 99/466 (21%)
Query: 34 KTLFQIHSQIIINGF---SQKNYILAKLLAFYVTSGY-----LINAHKVFEKTENPSTAI 85
+ L ++H+ +++G + + +L+A + S L++A + +P +
Sbjct: 22 RVLLKLHAHHLVSGLLSSHSTSPFIDRLVAAFAHSDPASPRPLLHALAILASLPSPPDSA 81
Query: 86 WNQMIRGHARSETPEKSVY------LYKQMIDK-ETEPDEYTYSFLLSVCARCGLFREGE 138
+ A S P + + LY+ ++ PD T+ FL+ CAR G
Sbjct: 82 FPYNAAFRALSLCPHQHLVDRHCLPLYRALLHSGSARPDHLTFPFLIKACARLQYRSYGA 141
Query: 139 QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYV 198
V G V G+ ++VF+ M+ + + G + AR LFD+ P R VVSWN+L+ GYV
Sbjct: 142 AVLGHVQKLGFSADVFVVNAAMHFWSVRG---PMAFARRLFDESPVRDVVSWNTLIGGYV 198
Query: 199 KRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVA 258
+ G A ++F W A++G + V D+V ++
Sbjct: 199 RSGLPREALELF----------WRL-----AEDGNA--------------VRPDEVTVIG 229
Query: 259 ALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM 318
A+S CA++GDL+LGK +H +V +N V V L NA++ MY CG +E A VF ++
Sbjct: 230 AVSGCAQMGDLELGKRLHEFV-DNKGVR---CTVRLMNAVMDMYVKCGSLELANSVFERI 285
Query: 319 QRRNTVSWTSMITGFAKQGYAQEALLTF-------------------------------- 346
R VSWT+MI G A+ G ++A + F
Sbjct: 286 SNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFH 345
Query: 347 --------------LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRA 392
+ +LSACS G ++ G ++++ + + +VD++++
Sbjct: 346 EMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRH-KLHLSVALGTSLVDMYAKC 404
Query: 393 GLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
G + +A + +P++ N S++ G H +A+ A + Q+++
Sbjct: 405 GNIKKAICVFNEIPVQ-NALTWTSMICGLANHGHADEAIEYFQRMI 449
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 191/600 (31%), Positives = 311/600 (51%), Gaps = 90/600 (15%)
Query: 11 PATSSKALTTRQIF--SLLQIRNTT--KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSG 66
P + ++TR++F L + T + ++H+QII Y+ KL++ +
Sbjct: 10 PTRAPTWVSTRRLFEEKLQDLHKCTDFNHIKEVHAQIIKRNLHNDLYVAPKLISAFSLCH 69
Query: 67 YLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLS 126
+ A VF + ++P+ ++N +IR H ++ K+ + M D +TY FLL
Sbjct: 70 QMNLAVNVFNQIQDPNVHLYNTLIRAHVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLK 129
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLY--------------LMSGGE--- 169
C G + +H V G+ ++F+ +L++ Y M GE
Sbjct: 130 ACNGKGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDL 189
Query: 170 -------------CGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
+G AR LFD+M R VSWN++L GYVK G++ A+ +F++MP R
Sbjct: 190 VSWNSMIGGLVKAGDLGRARKLFDEMAERDAVSWNTILDGYVKAGEMSQAFNLFEKMPER 249
Query: 217 NVVSWTTM-------------------------------ISGCAQNGKSRQALSLFNEMR 245
NVVSW+TM ISG A+ G +++A +L+N+M
Sbjct: 250 NVVSWSTMVSGYCKTGDMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQME 309
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC 305
A + D L++ L+ACAE G L LGK +H+ +++ R V+++NAL+ MYA C
Sbjct: 310 AAGLKPDDGTLISILAACAESGLLVLGKKVHASIKKI----RIKCSVNVSNALVDMYAKC 365
Query: 306 GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVL 350
G +++A +F +M R+ VSW M+ G A G+ ++A+ +T + +L
Sbjct: 366 GRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAIL 425
Query: 351 SACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPN 410
AC+H GFVD+G +F M ++ GI P IEHYGCM+DL R G ++EAF LVQ+MPM+PN
Sbjct: 426 CACTHAGFVDQGLSYFNSMERDHGIVPHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPN 485
Query: 411 DAVLGSLLLGCRIHNNAELASQVAQKLVA--EIDPEQAAGYLALVANVYAAAKRWQDVAA 468
D + G+LL CR+HN LA +V +L+ + DP G ++++N++AAA W VA
Sbjct: 486 DVIWGTLLGACRVHNAVPLAEKVLDRLITLEQSDP----GNYSMLSNIFAAAGDWNSVAN 541
Query: 469 VRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
+R +M GV+KP G S ++++ +H+F D ++ + IY+ L ++ Q Y P+
Sbjct: 542 MRLQMKSTGVQKPSGASSIELDDEVHEFTVFDKSHPETDKIYQILVKLGQDLKQVAYAPE 601
>gi|449447637|ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 542
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 183/525 (34%), Positives = 292/525 (55%), Gaps = 58/525 (11%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLL--AFYVTSGYLIN 70
T+ + Q SL Q ++L Q+H+ +I+NG + +L +L+ + V SG +
Sbjct: 6 TNDNSFNRFQQSSLWQKCTNFRSLKQLHAFLIVNGLNSTTSVLRELIFVSAIVVSGTMDY 65
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
AH++F + P +WN MIRG A++ P +V LY QM ++ PD++T+SF+L C +
Sbjct: 66 AHQLFAQISQPDIFMWNTMIRGSAQTLKPATAVSLYTQMENRGVRPDKFTFSFVLKACTK 125
Query: 131 CGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG------------------- 171
+ G +HG+VL SG+ SN F+R L+ + CG
Sbjct: 126 LSWVKLGFGIHGKVLKSGFQSNTFVRNTLIYFH----ANCGDLATARALFDASAKREVVP 181
Query: 172 -------------VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
+ AR LFD+MP + +VSWN ++ Y K G+++ A K+FDE+P ++V
Sbjct: 182 WSALTAGYARRGKLDVARQLFDEMPMKDLVSWNVMITAYAKHGEMEKARKLFDEVPKKDV 241
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
V+W MI+G + +++AL +F+ MR D V +++ LSA A++GDL++GK IH
Sbjct: 242 VTWNAMIAGYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIHRS 301
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ F + + V L+NALI MYA CG I A VF+ M++++T SW S+I G A G+
Sbjct: 302 I---FDMCCGDLSVLLSNALIDMYAKCGSIGNALEVFQGMRKKDTSSWNSIIGGLALHGH 358
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
A+E++ +TF+ VL ACSH G V EGR +F M + I+P I+HYG
Sbjct: 359 AEESINLFQEMLRLKMKPNEITFVAVLVACSHAGKVREGRMYFNLMKNVFKIEPNIKHYG 418
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
CMVD+ RAGL+ EAF + M ++PN + +LL CR+H + EL + ++L+ ++
Sbjct: 419 CMVDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLL-KMRK 477
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
+++ Y+ L++N+YA+ W V VR+ M GV+K G S +
Sbjct: 478 DESGDYV-LLSNIYASQGEWDGVQKVRKLMDDGGVKKKVGHSLID 521
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/400 (21%), Positives = 165/400 (41%), Gaps = 62/400 (15%)
Query: 109 MIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGG 168
MI K T + + S+ +C FR +Q+H ++ +G S + L+
Sbjct: 1 MIRKRTNDNSFNRFQQSSLWQKCTNFRSLKQLHAFLIVNGLNSTTSVLRELI-------- 52
Query: 169 ECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGC 228
+ V G +D A ++F ++ ++ W TMI G
Sbjct: 53 ------------------------FVSAIVVSGTMDYAHQLFAQISQPDIFMWNTMIRGS 88
Query: 229 AQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV-EENFSVGR 287
AQ K A+SL+ +M V D+ L AC ++ +KLG IH V + F
Sbjct: 89 AQTLKPATAVSLYTQMENRGVRPDKFTFSFVLKACTKLSWVKLGFGIHGKVLKSGFQSN- 147
Query: 288 EPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEA----- 342
+ N LI+ +A+CG++ A +F +R V W+++ G+A++G A
Sbjct: 148 ----TFVRNTLIYFHANCGDLATARALFDASAKREVVPWSALTAGYARRGKLDVARQLFD 203
Query: 343 ------LLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMD 396
L+++ +++A + G +++ R+ F+ + K + + M+ + + L
Sbjct: 204 EMPMKDLVSWNVMITAYAKHGEMEKARKLFDEVP-----KKDVVTWNAMIAGYVLSRLNK 258
Query: 397 EA---FSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALV 453
EA F ++++ +P+D + S+L + E+ ++ + + + + +
Sbjct: 259 EALEMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFDMCCGDLSVLLSNAL 318
Query: 454 ANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVL 493
++YA + V Q G+RK SW I G L
Sbjct: 319 IDMYAKCGSIGNALEVFQ-----GMRKKDTSSWNSIIGGL 353
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 184/517 (35%), Positives = 286/517 (55%), Gaps = 66/517 (12%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H+ ++ +GF +YI+ L+ Y L A ++F + WN MI G+ +
Sbjct: 22 VHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLCSDRDVVSWNAMIDGYVK--- 78
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGR-VLASGYCSNVFIRT 157
GE H R V C +V
Sbjct: 79 -------------------------------------RGEMGHTRMVFDRMVCRDVISWN 101
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
++N Y + G + A+ LFD+MP R++VSWNS+L G+VK G+++ A+ +F EMP R+
Sbjct: 102 TIINGYAIVGK---IDEAKRLFDEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRD 158
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VVSW +M++ AQ GK +AL+LF++MR V + +V+ LSACA +G L G +H+
Sbjct: 159 VVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHT 218
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y+ +N R V + AL+ MYA CG+I A VF M+ ++ ++W ++I G A G
Sbjct: 219 YINDN----RIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHG 274
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+ +EA +TF+ +LSACSH G VDEG++ +CM+ ++GI+P++EHY
Sbjct: 275 HVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHY 334
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
C++DL +RAGL++EA L+ MPM+PN + LG+LL GCRIH N EL V ++L+ +
Sbjct: 335 DCVIDLLARAGLLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLI-NLQ 393
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P + Y+ L++N+YAAAK+W D VR M G+ K PG S +++ G++H FVAGD +
Sbjct: 394 PCHSGRYI-LLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWS 452
Query: 503 YKQASLIYKTLGEITMQAMQE-GYKPDISELFLGIEE 538
+ +++ IY L EI + GY D + L +EE
Sbjct: 453 HPESNKIYDKLNEIHTRLKSAIGYSADTGNVLLDMEE 489
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 173/467 (37%), Positives = 282/467 (60%), Gaps = 26/467 (5%)
Query: 47 GFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLY 106
GF ++ + ++ G L A+ VF K+ WN MI G + +++ +Y
Sbjct: 188 GFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIY 247
Query: 107 KQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMS 166
K+M ++ P+E T ++S C++ G++ H + G + + LM++Y+
Sbjct: 248 KEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYV-- 305
Query: 167 GGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMI 225
+CG + AR+LFD+M +++VSW +++ GY + G +D A +I ++P ++VV W +I
Sbjct: 306 --KCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAII 363
Query: 226 SGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSV 285
SGC Q + ++AL+LF+EM+ + D+V +V LSAC+++G L +G WIH Y+E +
Sbjct: 364 SGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERH--- 420
Query: 286 GREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-- 343
+ + V+L AL+ MYA CG I A VF ++ +RN ++WT++I G A G AQ+AL
Sbjct: 421 -KLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSY 479
Query: 344 -------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFS 390
+TFLGVLSAC HGG V+EGR++F M+ + + P+++HY CMVDL
Sbjct: 480 FSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLG 539
Query: 391 RAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYL 450
RAG ++EA LV+NMPM + AVLG+L CR++ N ++ + A KL+ EIDP+ + Y+
Sbjct: 540 RAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLL-EIDPQDSGNYV 598
Query: 451 ALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
L+A++Y+ AK W++ + R+ M GV K PG S V+ING++H+FV
Sbjct: 599 -LLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSLVEINGIVHEFV 644
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 212/480 (44%), Gaps = 93/480 (19%)
Query: 10 NPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV--TSGY 67
N T+ + + S+L+ + L QI +Q++ G + + ++L+AF S
Sbjct: 47 NWNTTHSFVRENPLLSILERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKE 106
Query: 68 LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKET-EPDEYTYSFLLS 126
L ++ + + + WN IRG+ S E LYK+M+ T +PD +TY LL
Sbjct: 107 LDYCTRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLK 166
Query: 127 VCARCGLFRE--GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPA 184
C CG + G V G VL G+ ++F+ + + L+S GE V A +F+
Sbjct: 167 GC--CGQYSSCLGLGVLGHVLKFGFECDIFVHNASITM-LLSCGELSV--AYDVFNKSRV 221
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
R +V+WNS++ G VKRG A KI+ EM E
Sbjct: 222 RDLVTWNSMITGCVKRGLAIEAIKIYKEM-----------------------------EA 252
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYAS 304
+ R +++ ++ +S+C+++ DL LGK H Y++E+ G E + L NAL+ MY
Sbjct: 253 EKVRP--NEITMIGMISSCSQVQDLNLGKEFHCYIKEH---GLE-FTIPLTNALMDMYVK 306
Query: 305 CGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY-------------------------- 338
CGE+ A +F M ++ VSWT+M+ G+A+ G+
Sbjct: 307 CGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGC 366
Query: 339 -----AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
+EAL +T + LSACS G +D G + ++ +
Sbjct: 367 VQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERH-KLSID 425
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
+ +VD++++ G + A + + +P + N +++ G +H NA+ A K++
Sbjct: 426 VALGTALVDMYAKCGNIARALQVFEEIPQR-NCLTWTAVICGLALHGNAQDALSYFSKMI 484
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 101/243 (41%), Gaps = 40/243 (16%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHAR-- 95
+ H I +G + L+ YV G L+ A +F+ + W M+ G+AR
Sbjct: 280 EFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFG 339
Query: 96 ---------SETPEKSVY--------------------LYKQMIDKETEPDEYTYSFLLS 126
+ PEKSV L+ +M + EPD+ T LS
Sbjct: 340 FLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLS 399
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPAR 185
C++ G G +H + +V + T L+++Y +CG + A +F+++P R
Sbjct: 400 ACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMY----AKCGNIARALQVFEEIPQR 455
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVV----SWTTMISGCAQNGKSRQALSLF 241
+ ++W +++ G G+ A F +M H +V ++ ++S C G + F
Sbjct: 456 NCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYF 515
Query: 242 NEM 244
+EM
Sbjct: 516 SEM 518
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 201/561 (35%), Positives = 307/561 (54%), Gaps = 37/561 (6%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
+L++ I+ P SS A IF L N K Q H+QI+++G ++ AK++A
Sbjct: 65 ILLQPILQHFPHPSSYA----PIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVA 120
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHAR---SETPEKSVYLYKQMIDKETEPD 117
Y +SG L +A VF++ +NPS+ ++N +IR + R + Y +M D
Sbjct: 121 MYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGD 180
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV-GCAR 176
+T F+L CA G VHG+ L G + ++ +L+++Y+ +CGV G AR
Sbjct: 181 NFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYV----KCGVIGDAR 236
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
LFD M R + SWN+L+ GY+K G+I A +F+ M HRN+VSWT MISG QNG + Q
Sbjct: 237 KLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQ 296
Query: 237 ALSLFNEMRR--ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
AL LF+EM + + + + V +V+ L ACA+ L+ G+ IH + +G + S+
Sbjct: 297 ALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFAN---GIGLH-LNSSV 352
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQR--RNTVSWTSMITGFAKQGYAQEAL--------- 343
AL MYA C + EA F + + +N ++W +MIT +A G EA+
Sbjct: 353 QTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRA 412
Query: 344 ------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDE 397
+TF+G+LS CSH G +D G F M ++PR+EHY C+VDL RAG + E
Sbjct: 413 GVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVE 472
Query: 398 AFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVY 457
A L+ MPM+ +V G+LL CR H N E+A A++L ++P+ + Y+ L++N+Y
Sbjct: 473 AKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFV-LEPDNSGNYV-LLSNLY 530
Query: 458 AAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEIT 517
A A W++V +R + G++K PG SW++ING H F+ D ++ QA IYK L +
Sbjct: 531 AEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALP 590
Query: 518 MQAMQEGYKPDISELFLGIEE 538
+ GY PD S + I E
Sbjct: 591 EKIKMAGYIPDTSFVLHDISE 611
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 201/568 (35%), Positives = 304/568 (53%), Gaps = 66/568 (11%)
Query: 25 SLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAF--YVTSGYLINAHKVFEKTENPS 82
SLL ++ K QIH+QI G + KLL S L A ++F NP
Sbjct: 7 SLLSKCSSLKPTKQIHAQICKTGLHTDPLVFGKLLLHCAITISDALHYALRLFHHFPNPD 66
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKET-EPDEYTYSFLLSVCARCGLFREGEQVH 141
T + N +IR + S+TP S++ + Q+ + T PD +T++F L A R G Q+H
Sbjct: 67 TFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLRPGIQLH 126
Query: 142 GRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDM------------------ 182
+ G+ +++F+ T L+++Y ECG G AR +FD+M
Sbjct: 127 SQAFRHGFDAHIFVGTTLISMY----AECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRC 182
Query: 183 -------------PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCA 229
P R++ SWN +L GY K G++ A ++F EMP R+ VSW+TMI G A
Sbjct: 183 GDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFA 242
Query: 230 QNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEEN--FSVGR 287
NG +A F E+ R + ++V+L LSACA+ G + GK +H +VE+ VG
Sbjct: 243 HNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVG- 301
Query: 288 EPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQGYAQEAL--- 343
S+NNALI Y+ CG + A VF+ M R+ VSWTS+I G A G +EA+
Sbjct: 302 -----SVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLF 356
Query: 344 ------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSR 391
+TF+ +L ACSH G V+EG F M +GI+P IEHYGCMVDL+ R
Sbjct: 357 HEMEESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGR 416
Query: 392 AGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLA 451
A + +A+ + MP+ PN + +LL C IH N E+A V +L AE+DP+ + ++
Sbjct: 417 AARLQKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAELVKARL-AEMDPDNSGDHV- 474
Query: 452 LVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYK 511
L++NVYA A +W+DV+++R+ M + ++K PG S ++I+ V++ FVAG+ + ++
Sbjct: 475 LLSNVYAVAGKWKDVSSIRRTMTEHSMKKTPGWSMIEIDKVIYGFVAGEKPNEVTEEAHE 534
Query: 512 TLGEITMQAMQE-GYKPDISELFLGIEE 538
L EI ++ E GY P + + IEE
Sbjct: 535 KLREIMLRLRTEAGYAPQLRSVLHDIEE 562
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 181/516 (35%), Positives = 289/516 (56%), Gaps = 30/516 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAH--KVFEKTENPSTAIWNQMIRGHAR 95
QIH ++ G Q YIL KL+ G ++ + +V E + + +W +IRG+
Sbjct: 68 QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYPRRVIEPVQFRNPFLWTAVIRGYTI 127
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLA-SGYCSNVF 154
++++ +Y M +E P +T+S LL C G G Q H + G+C V+
Sbjct: 128 EGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMGDLNLGRQFHAQTFRLRGFCF-VY 186
Query: 155 IRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP 214
+ ++++Y+ G + CAR +FD+MP R V+SW L+ Y + G+++ A +F+ +P
Sbjct: 187 VGNTMIDMYVKCGS---IVCARKVFDEMPERDVISWTELIAAYARVGNMESAADLFESLP 243
Query: 215 HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKW 274
+++V+WT M++G AQN K ++AL F+ M ++ + D+V + +SACA++G K+
Sbjct: 244 TKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLG---ASKY 300
Query: 275 IHSYVEENFSVGREPV-LVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF 333
V+ G P V + +ALI MY+ CG +EEA VF M +N S++SMI G
Sbjct: 301 ADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVSMNNKNVFSYSSMILGL 360
Query: 334 AKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
A G AQEAL +TF+G L+ACSH G VD+GRQ F M Q +G++P
Sbjct: 361 ATHGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACSHSGLVDQGRQVFASMYQTFGVEP 420
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
+HY CMVDL RAG + EA L++ M ++P+ V G+LL CRIHNN ++A A+ L
Sbjct: 421 TRDHYTCMVDLLGRAGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPDIAEIAAEHL 480
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSW-VQINGVLHDF 496
E++P+ Y+ L++NVY++A W V +VR+ + + G++K P SW V NG +H F
Sbjct: 481 F-ELEPDIIGNYI-LLSNVYSSAGDWGGVLSVRKLIKEKGLKKTPAVSWVVDKNGQMHKF 538
Query: 497 VAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISEL 532
G+ + + I L E+ + GY+PD+S +
Sbjct: 539 FPGNLNHPMSKKIQDKLEELVERLTALGYQPDLSSV 574
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 203/584 (34%), Positives = 306/584 (52%), Gaps = 67/584 (11%)
Query: 11 PATSSK--ALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILA-KLLAFYVTSGY 67
P S K ALT +L + KTL ++HS+I+I+ N L KL+ Y G
Sbjct: 27 PQLSPKFTALTEDLCNKILDVNPDAKTLKKLHSKILIDQNLHPNPSLGIKLMRAYAACGE 86
Query: 68 LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSV 127
+F++ + + +N MIR + + + ++ ++K M ++ PD YTY +L
Sbjct: 87 PCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKA 146
Query: 128 CARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARS 186
C+ G G Q+HG V+ G N++I L+++Y G+C + AR + D+MP R
Sbjct: 147 CSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMY----GKCKWLDAARRVLDEMPGRD 202
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEM--------------------------------- 213
+VSWNS++ GY + G + A K+ EM
Sbjct: 203 MVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNVLYVKDM 262
Query: 214 ----PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDL 269
++++SW MI+ N +A+ L+ +M+ V D V++ + L AC ++
Sbjct: 263 FVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAA 322
Query: 270 KLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSM 329
LG+ IH YVE P L+ L NALI MYA CG ++EA VF +M R+ VSWTSM
Sbjct: 323 VLGRRIHEYVERK---KLRPNLL-LENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSM 378
Query: 330 ITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWG 374
I+ + G ++A+ + F+ VL+ACSH G VDEGR F M + +G
Sbjct: 379 ISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAE-YG 437
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVA 434
I P IEHY CMVDL RAG +DEA+ L + MPM+PN+ V GSLL CR++++ +A A
Sbjct: 438 ITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAA 497
Query: 435 QKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLH 494
L ++ PEQ+ GY L++N+YA A RWQDV VR M G++K PG S V+IN ++
Sbjct: 498 DHLF-QLAPEQS-GYYVLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVY 555
Query: 495 DFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
F+AGD ++ Q+ IYK LG + + + GY P+ +EE
Sbjct: 556 TFLAGDQSHTQSKEIYKALGVLVGRMKELGYMPETDSALHDVEE 599
>gi|225466196|ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 185/502 (36%), Positives = 296/502 (58%), Gaps = 26/502 (5%)
Query: 19 TTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFE 76
++R++ SLL T + QI S + ++G + ++++F S G + +A+ +F
Sbjct: 12 SSRRVLSLLDQCVTMAHIKQIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFL 71
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
++ IWN M+R + P + LYK M+ P+ YT+SFLL CA+
Sbjct: 72 SLPRRTSFIWNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSF 131
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKG 196
G +H + + G+ + F++ L++LY + C + AR LFD R VV+W +++ G
Sbjct: 132 GILLHAQAVRLGWEAYDFVQNGLLHLY--ASCNC-MDSARRLFDGSVNRDVVTWTAVING 188
Query: 197 YVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVAL 256
Y K G + A ++FDEMP +N VSW+ MI+G AQ G R+AL LFN+M+ A + A+
Sbjct: 189 YAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAI 248
Query: 257 VAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFR 316
V AL+ACA +G L G+WIH+YV+ N R + L ALI MYA CG +E A VF
Sbjct: 249 VGALTACAFLGALDQGRWIHAYVDRN----RMVLDRILGTALIDMYAKCGCVETACRVFD 304
Query: 317 KMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDE 361
+M R+ ++TS+I+G A G++ A+ +TF+ +LSACS G V+E
Sbjct: 305 EMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEE 364
Query: 362 GRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGC 421
G + F+ M +GI+P ++HYGC+VDL RAG++++A +V+ MP++P+ VLG+LL C
Sbjct: 365 GLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNAC 424
Query: 422 RIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKP 481
R+H + EL + + L AE + G L++N+YA+A +W+DVA VR+ M + V+K
Sbjct: 425 RVHGDVELGKETVECL-AERSLDH-GGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKV 482
Query: 482 PGQSWVQINGVLHDFVAGDSTY 503
PG S ++++G + +FVAGD ++
Sbjct: 483 PGCSLIEVDGAVFEFVAGDMSH 504
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 199/568 (35%), Positives = 313/568 (55%), Gaps = 64/568 (11%)
Query: 24 FSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKTENP 81
SLL I + T QIH+ ++ G +I KLL S L A ++F T NP
Sbjct: 9 LSLLNICKSLTTFKQIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRYTPNP 68
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKE-TEPDEYTYSFLLSVCARCGLFREGEQV 140
+ N +IRG S+ P+ S+ + +M + PD ++++F++ A R G Q+
Sbjct: 69 DVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVGIQL 128
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMP---------------- 183
H + L G +++F+ T L+++Y GECG VG AR +FD+MP
Sbjct: 129 HCQALVHGLDTHLFVGTTLISMY----GECGFVGFARKVFDEMPEPNAIAWNAMVTACCR 184
Query: 184 ---------------ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGC 228
R+++SWN +L GY K G+++ A ++F EMP ++ VSW+TMI G
Sbjct: 185 GGDMKGGRELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGF 244
Query: 229 AQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGRE 288
A NG +A S F E++R + ++ +L LSACA+ G L+ GK +H ++E++
Sbjct: 245 AHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAW-- 302
Query: 289 PVLVSLNNALIHMYASCGEIEEAYGVF-RKMQRRNTVSWTSMITGFAKQGYAQEAL---- 343
+VS+NNAL+ Y+ CG + A VF R M RN VSWTSM+ A G+ +EA+
Sbjct: 303 --IVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFH 360
Query: 344 -----------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRA 392
+ F+ +L ACSH G V++G ++F+ M + I+P IEHYGCMVDL+ RA
Sbjct: 361 KMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRA 420
Query: 393 GLMDEAFSLVQNMPMKPNDAVLGSLLLG-CRIHNNAELASQVAQKLVAEIDPEQAAGYLA 451
G + +A+ V MP+ P A++ LLG C +H + +LA QV ++L +E+DP ++ ++
Sbjct: 421 GQLQKAYEFVCQMPI-PCTAIIWRTLLGACSMHGDVKLAEQVKERL-SELDPNNSSDHV- 477
Query: 452 LVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYK 511
L++N YA A +W+D A+VR+ M + + K PG S ++++ +++ F+AG YK YK
Sbjct: 478 LLSNAYAVAGKWKDAASVRRSMTEQRITKTPGWSMIEVDKIMYTFLAGTKQYKITEEAYK 537
Query: 512 TLGEITMQAMQE-GYKPDISELFLGIEE 538
L EI + E GY P+I + IEE
Sbjct: 538 KLKEIIRRLRVEGGYVPEIGRVLHDIEE 565
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 184/496 (37%), Positives = 274/496 (55%), Gaps = 55/496 (11%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
LL Y G+L A ++F + W MI G RS E+ L+ +M ++ P+
Sbjct: 238 LLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPN 297
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
E T L+ C G + G+Q+H +L +G+ ++ + T L+++Y G+C
Sbjct: 298 EITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMY----GKCS------ 347
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
DI A +FD +R+V+ WT M+S AQ QA
Sbjct: 348 ------------------------DIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQA 383
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
+LF++MR + V +V +V+ LS CA G L LGKW+HSY+++ R V LN A
Sbjct: 384 FNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKE----RVEVDCILNTA 439
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------------- 343
L+ MYA CG+I A +F + R+ W ++ITGFA GY +EAL
Sbjct: 440 LVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPN 499
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
+TF+G+L ACSH G V EG++ FE M +G+ P+IEHYGCMVDL RAGL+DEA ++
Sbjct: 500 DITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMI 559
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKR 462
++MP+KPN V G+L+ CR+H N +L A +L+ EI+PE GY L++N+YAAA R
Sbjct: 560 KSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLL-EIEPEN-CGYNVLMSNIYAAANR 617
Query: 463 WQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQ 522
W D A VR+ M +G++K PG S +++NG +H+F+ GD ++ Q I + L E+ + +
Sbjct: 618 WSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNE 677
Query: 523 EGYKPDISELFLGIEE 538
GY PD S + L I+E
Sbjct: 678 AGYVPDTSTVLLNIDE 693
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 133/294 (45%), Gaps = 54/294 (18%)
Query: 124 LLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDM 182
+L C + + G+++HG VL G +VF+ LM +Y GEC V ARL
Sbjct: 100 VLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMY----GECACVEYARL----- 150
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
+FD+M R+VVSW+TMI ++N + AL L
Sbjct: 151 --------------------------VFDKMMERDVVSWSTMIRSLSRNKEFDMALELIR 184
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMY 302
EM +V +VA+V+ ++ A+ ++++GK +H+YV N + E + V AL+ MY
Sbjct: 185 EMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSN--NEHMGVPTTTALLDMY 242
Query: 303 ASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFL 347
A CG + A +F + ++ VSWT+MI G + +E +T L
Sbjct: 243 AKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITML 302
Query: 348 GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
++ C G + G+Q + +N G + +VD++ + + A +L
Sbjct: 303 SLIVECGFTGALQLGKQLHAYILRN-GFSVSLALATALVDMYGKCSDIRNARAL 355
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 128/295 (43%), Gaps = 40/295 (13%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H+ I+ NGFS + L+ Y + NA +F+ T+N IW M+ +A++
Sbjct: 319 QLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQAN 378
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ L+ QM P + T LLS+CA G G+ VH + + + T
Sbjct: 379 CIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNT 438
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L+++Y +CG + A LF + +R + WN+++ G+
Sbjct: 439 ALVDMY----AKCGDINAAGRLFIEAISRDICMWNAIITGF------------------- 475
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
A +G +AL +F EM R V + + + L AC+ G + GK +
Sbjct: 476 ------------AMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLF 523
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMI 330
+ F + + + ++ + G ++EA+ + + M + NT+ W +++
Sbjct: 524 EKMVHTFGLVPQ---IEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALV 575
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 199/588 (33%), Positives = 310/588 (52%), Gaps = 87/588 (14%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLIN-A 71
++ K + SLLQ T+ + QIH+Q+I + ++LL V+ +N A
Sbjct: 4 STPKLQLKNPLLSLLQKSKTSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYA 63
Query: 72 HKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVC-AR 130
VF + P++ I N M++ + S TPE+++ Y +M K D YTY F+L C A
Sbjct: 64 ELVFAQIHQPNSFICNTMVKCYTESSTPERALRFYAEMRRKGLLGDNYTYPFVLKACGAM 123
Query: 131 CGLFREGEQVHGRVLASGYCSNV-------------------------FIRTNLMNLYLM 165
CGL EG V G + G+ +V F +L++ M
Sbjct: 124 CGLL-EGGLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSM 182
Query: 166 SGGE--CG---------------------------------VGCARLLFDDMPARSVVSW 190
GG CG V AR+ FD MP R +VSW
Sbjct: 183 LGGYVWCGEMENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSW 242
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG 250
NS++ GY K G+++ A +IFD+M +NV+SW+ MI G AQ+ S++AL+LF +M +
Sbjct: 243 NSMIDGYAKVGEMEVAREIFDKMLQKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIK 302
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEE 310
D+V++V A+SAC+++G L G+WIH Y++ N R + + + AL+ MY CG +E
Sbjct: 303 PDRVSVVGAVSACSQLGALDQGRWIHLYMKRN----RMLLDIVVQTALVDMYLKCGSRDE 358
Query: 311 AYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSH 355
A +F M RN VSW MI G G+ +EAL L FLGVL ACSH
Sbjct: 359 ARRIFNSMPERNVVSWNVMIVGLGMNGFGKEALECFTQMEMERIPMDDLLFLGVLMACSH 418
Query: 356 GGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLG 415
V EG F M + ++P++EHYGC+VDL RAG +D+ +++Q+MPMKPN A+ G
Sbjct: 419 ANLVTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWG 478
Query: 416 SLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIK 475
SLLL CRIH N LA V ++L AE+ + + Y+ L++N+YA W+ + +R+ M +
Sbjct: 479 SLLLACRIHQNVTLAEIVVERL-AELKADDSGVYV-LMSNIYADVGMWEGMLRIRKLMKE 536
Query: 476 MGVRKPPGQSWVQINGVLHDFVAGDSTY---KQASLIYKTLGEITMQA 520
++K G+S ++++G + +FV+G+ ++ ++ L+ +L ++ M A
Sbjct: 537 RKMKKDIGRSVIEVDGNVEEFVSGEKSHILREEIELVIWSLAKMAMFA 584
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 174/520 (33%), Positives = 302/520 (58%), Gaps = 33/520 (6%)
Query: 36 LFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHAR 95
L +IH+ I+ SQ ++++ K++ A+ +F++ +P+ ++N MIR +
Sbjct: 30 LKKIHAHIVKFSLSQSSFLVTKMVDVCNHHAETEYANLLFKRVADPNAFLYNAMIRAYKH 89
Query: 96 SETPEKSVYLYKQMI-----DKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYC 150
++ ++ +YKQM+ + PD++T+ F++ CA + G+QVHG V G
Sbjct: 90 NKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQK 149
Query: 151 SNVFIRTNLMNLYLMSGGEC-GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKI 209
SN + +L+ +Y+ +C + A +F++M R VSWN+L+ G+V+ G + A I
Sbjct: 150 SNTVVENSLVEMYV----KCDSLDDAHKVFEEMTERDAVSWNTLISGHVRLGQMRRARAI 205
Query: 210 FDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDL 269
F+EM + + SWT ++SG A+ G AL F M+ + D+++LV+ L ACA++G L
Sbjct: 206 FEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPACAQLGAL 265
Query: 270 KLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSM 329
+LGKWIH Y ++ + + + NALI MYA CG I+E +F +M R+ +SW++M
Sbjct: 266 ELGKWIHFYADKAGFLRN----ICVCNALIEMYAKCGSIDEGRRLFDQMNERDVISWSTM 321
Query: 330 ITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWG 374
I G A G A EA+ +TF+G+LSAC+H G ++EG ++FE M +++
Sbjct: 322 IVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAHAGLLNEGLRYFESMKRDYN 381
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVA 434
I+P +EHYGC+V+L +G +D+A L++ MPMKP+ A+ GSLL CR H+N E+A +A
Sbjct: 382 IEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAIWGSLLSSCRSHSNLEIAV-IA 440
Query: 435 QKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLH 494
+ + E++P Y+ L++N+YA +W V+ +R+ M ++K PG S ++++ ++
Sbjct: 441 MEHLLELEPADTGNYV-LLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSSIEVDNMVQ 499
Query: 495 DFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFL 534
+F +GD + + IY+ L + M Q DI E+ +
Sbjct: 500 EFASGDDSKPFSKAIYRVLKLLVMH--QRRMDDDIIEIMV 537
>gi|297832654|ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330049|gb|EFH60468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 176/515 (34%), Positives = 297/515 (57%), Gaps = 25/515 (4%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH+ II++G SQ ++++ K++ G + A ++F + NP+ ++N +IR + +
Sbjct: 28 KIHACIIVHGLSQSSFMVTKMVDLCDKLGDMDYATRLFNQVSNPNVFLYNSIIRAYTHNS 87
Query: 98 TPEKSVYLYKQMIDKETE-PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
+ +YKQ++ K E PD +T+ F+ CA G G+QVHG + G +V
Sbjct: 88 LYCDVIRIYKQLLRKTIEFPDRFTFPFMFKSCASLGSCYLGKQVHGHLYKFGPRFHVVTE 147
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L+++Y+ A +FD+M R V+SWNSLL GY + G + A +F M +
Sbjct: 148 NALIDMYMKFDDLVD---AHKVFDEMSERDVISWNSLLSGYARLGQMKKAKGLFHLMIDK 204
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
+VSWT MISG G +A+ F EM+ A + D+++L++ L +CA +G L+LGKWIH
Sbjct: 205 TIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAHLGSLELGKWIH 264
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
Y E + + V NALI MY+ CG + +A +F + + ++ +SW++MI+G+A
Sbjct: 265 MYAERRGLLKQTGVC----NALIEMYSKCGMLSQAIQLFEQTKGKDVISWSTMISGYAYH 320
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G A A +TFLG+LSACSH G +G ++F+ M Q++ I+P+IEH
Sbjct: 321 GNAHRAFETFIEMQRAKVKPNGITFLGLLSACSHVGLWQQGLKYFDMMRQDYQIEPKIEH 380
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YGC++D+ +RAG ++ A + + MP+KP+ + GSLL CR N ++A VA + E+
Sbjct: 381 YGCLIDVLARAGKLERAVEITKTMPVKPDSKIWGSLLSSCRTKGNLDVA-LVAMDHLVEV 439
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+P+ Y+ L+AN+YA +W+DV+ +R+ + K ++K PG S +++N ++ +FVAGD+
Sbjct: 440 EPDDMGNYV-LLANIYADLGKWEDVSRLRKIIRKENMKKTPGCSLIEVNNIVQEFVAGDN 498
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGI 536
+ + I L T Q+ K + + F+G+
Sbjct: 499 SKPFWTEISLVLQLFTSHQDQDVIKNNNALAFIGM 533
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 180/494 (36%), Positives = 284/494 (57%), Gaps = 54/494 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H Q I G + Y+ L+ Y + +A KVF+ + W MI+G+ +
Sbjct: 146 EVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMG 205
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+ V L+ +M + + D T +LS CAR G R G ++H + IR
Sbjct: 206 FAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYI----------IRN 255
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
+ +NL + G N+L+ Y+K GD + A K+F EMP +N
Sbjct: 256 SNVNLDVFVG-----------------------NALVDMYLKCGDANFARKVFQEMPVKN 292
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VVSW +MISG AQ G+ +++L +F +M+R V D V LVA L++CA +G L+LGKW+H+
Sbjct: 293 VVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHA 352
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y++ N + + + NAL+ MYA CG I++A VF+ M R++ S+T+MI G A G
Sbjct: 353 YLDRN-QIRADGFI---GNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHG 408
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+AL +TF+GVL+ACSH G V+EGR++FE M+ + ++P++EHY
Sbjct: 409 QGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHY 468
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
GCMVDL RAGL++EA ++NMP++P+ VLG+LL C+IH EL V +K + +I+
Sbjct: 469 GCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKK-IEKIE 527
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P + Y+ L++N+Y++A RW+D +R+ M + + K PG S ++++GV+H+F GD +
Sbjct: 528 PRKDGAYV-LMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSIELDGVIHEFQKGDKS 586
Query: 503 YKQASLIYKTLGEI 516
+ + IYK L EI
Sbjct: 587 HPKIKEIYKLLDEI 600
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 202/408 (49%), Gaps = 64/408 (15%)
Query: 24 FSLLQIRNTTKTLFQIHSQIIINGFS-QKNYILAKLLAFYVTSGYLIN---AHKVFEKTE 79
S LQ + K L QIH+ II S ++ L+ I+ A + +
Sbjct: 26 LSTLQTCKSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLR 85
Query: 80 NPSTAIWNQMIRGHARSETPE-KSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE 138
P+ ++N +IRG A S + + +YKQM+ K PD YT F+L CA REGE
Sbjct: 86 TPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGE 145
Query: 139 QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV-GCARLLFDDMPARSVVSWNSLLKGY 197
+VHG+ + G S+V++ LM +Y + C V AR +FD P R +VSW ++++GY
Sbjct: 146 EVHGQAIKMGLASDVYVSNTLMRMYAV----CDVIRSARKVFDTSPQRDLVSWTTMIQGY 201
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
VK G +R+ + LF EM + D + LV
Sbjct: 202 VKM-------------------------------GFAREGVGLFFEMCGENLQADGMTLV 230
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
LS+CA +GDL+LG+ +H Y+ N +V + V + NAL+ MY CG+ A VF++
Sbjct: 231 IVLSSCARLGDLRLGRKLHRYIIRNSNVNLD---VFVGNALVDMYLKCGDANFARKVFQE 287
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEG 362
M +N VSW SMI+G A++G +E+L +T + VL++C++ G ++ G
Sbjct: 288 MPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELG 347
Query: 363 RQFFECMNQNWGIKPRIEHY--GCMVDLFSRAGLMDEAFSLVQNMPMK 408
+ +++N + R + + +VD++++ G +D+A + Q M K
Sbjct: 348 KWVHAYLDRN---QIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRK 392
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 187/514 (36%), Positives = 288/514 (56%), Gaps = 27/514 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH+ I + + Y+ + L+ Y G + A + F+ + WN +I + ++
Sbjct: 172 QIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNG 231
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLA-SGYCSNVFIR 156
K++ ++ M+D EPDE T + ++S CA REG Q+H RV+ Y +++ +
Sbjct: 232 PAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLG 291
Query: 157 TNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
L+++Y +C V ARL+FD MP R+VVS S++ GY + + A +F M
Sbjct: 292 NALVDMY----AKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMME 347
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
+NVVSW +I+G QNG++ +A+ LF ++R + L+ACA + DLKLG+
Sbjct: 348 KNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQA 407
Query: 276 HSYVEEN---FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
H+ + ++ F G E + + N+LI MY CG +E+ VF +M R+ VSW +MI G
Sbjct: 408 HTQILKHGFWFQSGEESDIF-VGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVG 466
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
+A+ GY AL +T +GVLSACSH G V+EGR++F M G+ P
Sbjct: 467 YAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAP 526
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
+H+ CMVDL RAG +DEA L+Q MPM+P++ V GSLL C++H N EL VA+KL
Sbjct: 527 MKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKL 586
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
+ EIDP + Y+ L++N+YA RW+DV VR++M + GV K PG SW++I +H F+
Sbjct: 587 M-EIDPLNSGPYV-LLSNMYAELGRWKDVVRVRKQMRQRGVIKQPGCSWIEIQSRVHVFM 644
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQEGYKPDISE 531
D + I+ L +T Q GY P+ +
Sbjct: 645 VKDKRHPLKKDIHLVLKFLTEQMKWAGYVPEADD 678
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 157/308 (50%), Gaps = 24/308 (7%)
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCA 175
D ++ LL C R + ++H R++ + + S +FI+ L++ Y G+CG A
Sbjct: 18 DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAY----GKCGYFEDA 73
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
R +FD MP R+ S+N++L K G +D A+ +F MP + SW M+SG AQ+ +
Sbjct: 74 RKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFE 133
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
+AL F +M L++ + +ALSACA + DL +G IH+ + S R + V +
Sbjct: 134 EALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALI----SKSRYLLDVYMG 189
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------ 343
+AL+ MY+ CG + A F M RN VSW S+IT + + G A +AL
Sbjct: 190 SALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVE 249
Query: 344 ---LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFS 400
+T V+SAC+ + EG Q + + + + +VD++++ ++EA
Sbjct: 250 PDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARL 309
Query: 401 LVQNMPMK 408
+ MP++
Sbjct: 310 VFDRMPLR 317
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 152/341 (44%), Gaps = 70/341 (20%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTEN----------------- 80
+IH++II FS + +I +L+ Y GY +A KVF++
Sbjct: 40 RIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFG 99
Query: 81 --------------PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLS 126
P WN M+ G A+ + E+++ + M ++ +EY++ LS
Sbjct: 100 KLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALS 159
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPAR 185
CA G Q+H + S Y +V++ + L+++Y +CG V CA+ FD M R
Sbjct: 160 ACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMY----SKCGVVACAQRAFDGMAVR 215
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
++VSWNSL+ Y QNG + +AL +F M
Sbjct: 216 NIVSWNSLITCY-------------------------------EQNGPAGKALEVFVMMM 244
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC 305
V D++ L + +SACA ++ G IH+ V + + V L NAL+ MYA C
Sbjct: 245 DNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLV---LGNALVDMYAKC 301
Query: 306 GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
+ EA VF +M RN VS TSM+ G+A+ + A L F
Sbjct: 302 RRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMF 342
>gi|227462996|gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227462998|gb|ACP39951.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 532
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 186/501 (37%), Positives = 287/501 (57%), Gaps = 28/501 (5%)
Query: 20 TRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY--LINAHKVFEK 77
+++ SLL+ T + Q+HS +I++ + K+++ + S + +A+K+F
Sbjct: 10 SQRCLSLLEQCRTMSQIKQMHSHLIVSASRLDPFAAGKIISLFAVSSNADISHAYKLFLS 69
Query: 78 TENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+ +T IWN +IR ++ LYK M+ P+ YT+SF+L C G
Sbjct: 70 LPHRTTFIWNTIIRIFVEKNENATALSLYKNMLQTGFLPNNYTFSFVLRACTDNSPV--G 127
Query: 138 EQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGY 197
H +V+ G+ S F+ L++LY V AR LFD R V++W +L+ GY
Sbjct: 128 LASHAQVIKLGWESYDFVLNGLIHLY---ANWSSVEAARKLFDVSTCRDVITWTALINGY 184
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
VK G ++ A ++FD+MP RN VSW+ MI+G G R+AL LFN+++ + + +V
Sbjct: 185 VKSGHVEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPNHAGIV 244
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
AL+AC+ +G L G+WIH+YV+ N G E V L AL+ MYA CG IE A VF K
Sbjct: 245 GALTACSYLGSLDHGRWIHAYVDRN---GTELDRV-LGTALVDMYAKCGCIEIACSVFEK 300
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEG 362
M ++ ++TS+I+G A G + +A+ +TF+ VLSACS G VDEG
Sbjct: 301 MPDKDAFAFTSLISGLANHGQSADAIQLFGRMQSEKVIPNEVTFICVLSACSRMGLVDEG 360
Query: 363 RQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCR 422
+ F CM+ +GI+P ++HYGCMVDL RAGL++EA LV+ MPM+P+ VLG+LL CR
Sbjct: 361 LRIFNCMSVVYGIEPGVQHYGCMVDLLGRAGLLEEAKRLVREMPMEPDSYVLGALLNSCR 420
Query: 423 IHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPP 482
+H + EL + + LV G L++N+YA++ +W V VR++M V+K P
Sbjct: 421 VHGDVELGKETVESLVER--GLDHGGVHVLLSNMYASSNQWDWVVKVRKEMGAKKVKKVP 478
Query: 483 GQSWVQINGVLHDFVAGDSTY 503
G S ++I+G + +F+AGD +Y
Sbjct: 479 GCSSIEIDGSVSEFIAGDMSY 499
>gi|242049246|ref|XP_002462367.1| hypothetical protein SORBIDRAFT_02g024490 [Sorghum bicolor]
gi|241925744|gb|EER98888.1| hypothetical protein SORBIDRAFT_02g024490 [Sorghum bicolor]
Length = 532
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 194/480 (40%), Positives = 285/480 (59%), Gaps = 30/480 (6%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVF----EKTENPSTAIWNQM 89
+ L Q+H+Q+++NGF+ K ++LAKLL+ + L A +F + T +
Sbjct: 48 RGLDQLHAQLLLNGFTHKRFLLAKLLSLAAAAADLPRAESLFLLSVPHSPASPTLANLLL 107
Query: 90 IRGHARSETPEKSVYLYKQMID-KETEPDEYTYSFLLSVCARCGLFR--EGEQVHGRVLA 146
A TP + + +++ P+ +++S LL+ A G G +H R LA
Sbjct: 108 RAAAASGATPGALLAFFSRLVGCHGLRPNAFSFSTLLAAIAPAGAGALPHGRALHARALA 167
Query: 147 SGYCSNV----FIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGD 202
SG + + T+L+ +Y + AR +FD+M R+V +WN +L YV+ G+
Sbjct: 168 SGMLAPTGESGHVMTSLVGVY---AAARQLEDARKVFDEMLTRAVAAWNCMLAAYVRCGE 224
Query: 203 IDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSA 262
+D A + F EMP R+ V+WTTMI GCA G++ +A+ LF MR+ARV D V +VA L+A
Sbjct: 225 VDAALRFFGEMPRRDAVAWTTMIGGCANAGRAAEAVDLFWRMRKARVKDDTVTMVALLTA 284
Query: 263 CAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRN 322
CAE+GDL+LG+W+H+ V+ S R V L+NALIHMY CG IE+A +F M RR+
Sbjct: 285 CAELGDLELGRWVHARVDLEGSQWRT---VLLDNALIHMYLKCGAIEDARCLFGMMPRRS 341
Query: 323 TVSWTSMITGFAKQGYAQEAL------------LTFLGVLSACSHGGFVDEGRQFFECMN 370
TVSWT+MI+G A G+ QEAL T L VL ACSH G +D+ R +FE M
Sbjct: 342 TVSWTTMISGLAIHGHPQEALNLFHRMQDRPDGATMLAVLRACSHAGRIDDARWYFESME 401
Query: 371 QNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELA 430
+GI P I+HYGCMVD+ R ++EA LV+ MP +PN+ V G++L GCR N ELA
Sbjct: 402 GVYGINPEIQHYGCMVDMLCRWRRLNEALELVEKMPFQPNEGVWGAILSGCRRDGNLELA 461
Query: 431 SQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQIN 490
++V +LV E+ PE+AAG+L L++N+YAA +W+ VR+++ + KP G+SWV N
Sbjct: 462 AKVNDRLV-ELQPERAAGHLVLLSNMYAAVGQWEQARMVRERVAALNAEKPAGRSWVNEN 520
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 185/516 (35%), Positives = 303/516 (58%), Gaps = 48/516 (9%)
Query: 41 SQIIINGFSQKNYIL-AKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
+Q + + ++N I ++ Y L A + F+ S WN M+ G+A++
Sbjct: 182 AQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLA 241
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCG-------LFREGEQVHGRVLASGYCSN 152
E+ + L+ +M++ EPDE T+ ++S C+ G L R Q ++ N
Sbjct: 242 EEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQL-------N 294
Query: 153 VFIRTNLMNLYLMSGGECG-VGCARLLFDDMPA-RSVVSWNSLLKGYVKRGDIDGAWKIF 210
F+RT L+++Y +CG +G AR +FD++ A R+ V+WN+++ Y + G++D A ++F
Sbjct: 295 CFVRTALLDMY----AKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELF 350
Query: 211 DEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR-VGLDQVALVAALSACAEIGDL 269
+ MP RNVV+W +MI+G AQNG+S A+ LF EM A+ + D+V +V+ +SAC +G L
Sbjct: 351 NTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGAL 410
Query: 270 KLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSM 329
+LG W+ ++ EN + + +S +NA+I MY+ CG +E+A VF++M R+ VS+ ++
Sbjct: 411 ELGNWVVRFLTEN----QIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTL 466
Query: 330 ITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWG 374
I+GFA G+ EA+ +TF+GVL+ACSH G ++EGR+ FE +
Sbjct: 467 ISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD--- 523
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVA 434
P I+HY CMVDL R G +++A ++ MPM+P+ V GSLL RIH EL A
Sbjct: 524 --PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAA 581
Query: 435 QKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLH 494
KL E++P+ + ++ L++N+YA+A RW+DV +R+ M K GV+K G SWV+ G LH
Sbjct: 582 NKLF-ELEPDNSGNFI-LLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLH 639
Query: 495 DFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
F+ D +++++ IY+ L E+ + + GY D S
Sbjct: 640 KFIVADRSHERSDDIYQLLIELRKKMREAGYIADKS 675
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 124/451 (27%), Positives = 202/451 (44%), Gaps = 87/451 (19%)
Query: 36 LFQIHSQIIINGFSQKNYILAKLL----AFYVTSGYLINAHKVFEKTENPSTAIWNQMIR 91
L Q+H+QII N NY +A L+ Y H +F T NP+ ++ M+R
Sbjct: 17 LRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHY---THLLFNSTLNPNVFVFTSMLR 73
Query: 92 GHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCS 151
++ + K V +++ M PD + Y L+ G+ H VL G+ S
Sbjct: 74 FYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGNGGI-----GFHAHVLKLGHGS 128
Query: 152 NVFIRTNLMNLYLMSG--GEC----------------------------GVGCARLLFDD 181
+ F+R ++++Y G G G A+ LFD
Sbjct: 129 DAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDV 188
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
MP R+V++W +++ GY K D++ A + FD MP R+VVSW M+SG AQNG + + L LF
Sbjct: 189 MPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLF 248
Query: 242 NEMRRARVGLDQVALVAALSACAEIGD---------------LKLGKWIHSYVEENF--- 283
+EM A + D+ V +SAC+ GD ++L ++ + + + +
Sbjct: 249 DEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKC 308
Query: 284 -SVG-REPVLVSLN--------NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF 333
S+G + L NA+I Y G ++ A +F M RN V+W SMI G+
Sbjct: 309 GSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGY 368
Query: 334 AKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
A+ G + A+ +T + V+SAC H G ++ G + +N IK
Sbjct: 369 AQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTEN-QIKL 427
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
I + M+ ++SR G M++A + Q M +
Sbjct: 428 SISGHNAMIFMYSRCGSMEDAKRVFQEMATR 458
>gi|147807930|emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 197/588 (33%), Positives = 309/588 (52%), Gaps = 87/588 (14%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLIN-A 71
++ K + SLLQ T+ + QIH+Q+I + ++LL V+ +N A
Sbjct: 4 STPKLQLKNPLLSLLQXSKTSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYA 63
Query: 72 HKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVC-AR 130
VF + P++ I N M++ + S TPE+++ Y +M K D YTY F+L C A
Sbjct: 64 ELVFAQIHQPNSFICNTMVKCYTESSTPERALRFYAEMRKKGLLGDNYTYPFVLKACGAM 123
Query: 131 CGLFREGEQVHGRVLASGYCSNV-------------------------FIRTNLMNLYLM 165
CGL EG V G + G+ +V F +L++ M
Sbjct: 124 CGLL-EGGLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSM 182
Query: 166 SGGE--CG---------------------------------VGCARLLFDDMPARSVVSW 190
GG CG V AR+ FD MP R +VSW
Sbjct: 183 LGGYVWCGEMENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSW 242
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG 250
NS++ GY K G+++ A +IFB+M +NV+SW+ MI G A + S++AL+LF +M +
Sbjct: 243 NSMIDGYAKVGEMEVAREIFBKMLQKNVISWSIMIDGYAXHRDSKEALNLFRQMLCQGIK 302
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEE 310
D+V++V A+SAC+++G L G+WIH Y++ N R + + + AL+ MY CG +E
Sbjct: 303 PDRVSVVGAVSACSQLGALDQGRWIHLYMKRN----RMLLDIVVQTALVDMYLKCGSXDE 358
Query: 311 AYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSH 355
A +F M RN VSW MI G G+ +EAL L FLGVL ACSH
Sbjct: 359 ARXIFNSMPERNVVSWNVMIVGLGMNGFGKEALECFXQMEMERIPMDDLLFLGVLMACSH 418
Query: 356 GGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLG 415
V EG F M + ++P++EHYGC+VDL RAG +D+ +++Q+MPMKPN A+ G
Sbjct: 419 ANLVTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWG 478
Query: 416 SLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIK 475
SLLL CRIH N LA V ++L AE+ + + Y+ L++N+YA W+ + +R+ M +
Sbjct: 479 SLLLACRIHQNVTLAEIVVERL-AELKADDSGVYV-LMSNIYADVGMWEGMLRIRKLMKE 536
Query: 476 MGVRKPPGQSWVQINGVLHDFVAGDSTY---KQASLIYKTLGEITMQA 520
++K G+S ++++G + +FV+G+ ++ ++ L+ +L ++ M A
Sbjct: 537 RKMKKDIGRSVIEVDGNVEEFVSGEKSHILREEIELVIWSLAKMAMFA 584
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 182/518 (35%), Positives = 285/518 (55%), Gaps = 29/518 (5%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H I F YIL L+ FY G L A ++F+ WN MI A+
Sbjct: 148 VHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNC 207
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
PE ++ L+ +M + P+ T +LS CA+ G V + G ++ +
Sbjct: 208 PEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNA 267
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
++++Y G V A+ LFD+MP R V SW +L GY K GD D A +F+ MP + +
Sbjct: 268 MLDMYTKCGS---VDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEI 324
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGL-DQVALVAALSACAEIGDLKLGKWIHS 277
+W +IS QNGK ++AL++FNE++ +++ D+V LV+ LSACA++G + LG WIH
Sbjct: 325 AAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHV 384
Query: 278 YVEENFSVGREPVLVS--LNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
Y++ RE ++++ L ++L+ MYA CG +E+A VF ++ R+ W++MI G
Sbjct: 385 YIK------REGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGM 438
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
G + A+ +TF VL ACSH G VDEGR FF M +G+ P ++
Sbjct: 439 HGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMK 498
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HY CMVD+ RAG ++EA L+ M P+ +V G+LL C +H N EL + +L+ +
Sbjct: 499 HYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLL-K 557
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
++P G + L++N+YA RW+ V+ +R+ M ++K PG S ++ NG +H+F+ GD
Sbjct: 558 LEPRN-HGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGD 616
Query: 501 STYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+T+ +S IY L EI + GY+P+ S L IEE
Sbjct: 617 NTHPLSSNIYSKLEEIATKLKSVGYEPNKSHLLQLIEE 654
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 160/336 (47%), Gaps = 53/336 (15%)
Query: 20 TRQIFSLLQIRNTTKTLFQIHSQIIING-----FSQKNYILAKLLAFYVTSGYLINAHKV 74
QI S + +++K L ++H++++ G FS A L+ + T Y A +
Sbjct: 25 NHQILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDY---ARNL 81
Query: 75 FEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDK-ETEPDEYTYSFLLSVCARCGL 133
F++ P+ WN +IR +A S P +S ++ ++DK E P+++T+ F++ +
Sbjct: 82 FDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKA 141
Query: 134 FREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNS 192
R G VHG + + +++I +L+ Y G CG + A LF + + VVSWNS
Sbjct: 142 SRVGTAVHGMAIKLSFGMDLYILNSLVRFY----GACGDLSMAERLFKGISCKDVVSWNS 197
Query: 193 LLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLD 252
+ IS AQ AL LF +M R V +
Sbjct: 198 M-------------------------------ISAFAQGNCPEDALELFLKMERENVMPN 226
Query: 253 QVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN--NALIHMYASCGEIEE 310
V +V LSACA+ DL+ G+W+ SY+E R+ + V L NA++ MY CG +++
Sbjct: 227 SVTMVGVLSACAKKLDLEFGRWVCSYIE------RKGIKVDLTLCNAMLDMYTKCGSVDD 280
Query: 311 AYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
A +F +M R+ SWT M+ G+AK G A L F
Sbjct: 281 AQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVF 316
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 186/551 (33%), Positives = 297/551 (53%), Gaps = 67/551 (12%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H ++ GF ++ +L+ Y G + +A KVFE+ S WN M+ G+A +
Sbjct: 995 VHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYD 1054
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCG-------------------------- 132
+ +++ M EP+ T++ LLS ARCG
Sbjct: 1055 CHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAV 1114
Query: 133 ---------LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMP 183
F EG+ +HG V+ G+ + +F++ +L+ LY G V AR+LF ++
Sbjct: 1115 VLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLY---GKHGNVNAARILFLEIK 1171
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIF------DEMP--HRNVVSWTTMISGCAQNGKSR 235
+++VSWN+L+ Y G D A+ IF DE P NVVSW+ +I G A G+
Sbjct: 1172 TKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGE 1231
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
+AL LF M+ A+V + V + + LS CAE+ L LG+ IH +V + G + +
Sbjct: 1232 EALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGN----ILVG 1287
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------ 343
N LI+MY G +E VF K++ ++ +SW +M+ G+ G + A+
Sbjct: 1288 NGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFE 1347
Query: 344 ---LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFS 400
+TF+ VLSACSH G V EGR+ F+ M + + ++P++EHY CMVDL RAGL+ EA
Sbjct: 1348 PDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASK 1407
Query: 401 LVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAA 460
+V++MP++PN V G+LL CR+H N E+A + A ++ ++ E A Y+ L++N+YAA+
Sbjct: 1408 VVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIF-NLNSEIAGSYM-LLSNIYAAS 1465
Query: 461 KRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQA 520
RW+D A VR G++K PGQSW+Q+ ++ F AG++ + + +Y+ L ++ +Q
Sbjct: 1466 GRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQM 1525
Query: 521 MQEGYKPDISE 531
EGY PDI E
Sbjct: 1526 EVEGYIPDIDE 1536
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 197/405 (48%), Gaps = 41/405 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTEN---PSTAIWNQMIRGHA 94
QIHSQII+ G + ++ A++++ Y G + +A +VFE + + +WN ++R +
Sbjct: 890 QIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANV 949
Query: 95 RSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVF 154
E+++ +Y +M D +T+ ++ CA G + VHG V+ G+ N+
Sbjct: 950 AHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLH 1009
Query: 155 IRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
+ LM +Y G+ G + AR +F+ M RS VSWN+++ GY D GA ++F M
Sbjct: 1010 VGNELMGMY----GKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMM 1065
Query: 214 P----HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDL 269
N+V+WT+++S A+ G+ + + LF MR +G AL LS ++
Sbjct: 1066 GSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAF 1125
Query: 270 KLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSM 329
GK IH YV + G E L + N+LI +Y G + A +F +++ +N VSW ++
Sbjct: 1126 DEGKVIHGYVVKG---GFENYLF-VKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNAL 1181
Query: 330 ITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLF 389
I+ +A G+ EA FL E ++ ++P + + ++ F
Sbjct: 1182 ISSYADLGWCDEAFAIFLQ-----------------LEKTDEYPMVRPNVVSWSAVIGGF 1224
Query: 390 SRAGLMDEAFSLVQNMPM---KPNDAVLGSLLLGCRIHNNAELAS 431
+ G +EA L + M + K N + S+L C AELA+
Sbjct: 1225 ASKGQGEEALELFRRMQLAKVKANSVTIASVLSVC-----AELAA 1264
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH ++ + + L+ Y SG + VFEK EN WN M+ G+
Sbjct: 1270 EIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHG 1329
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVL 145
E ++ + QMI EPD T+ +LS C+ GL EG ++ +++
Sbjct: 1330 LGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMI 1377
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 304/578 (52%), Gaps = 67/578 (11%)
Query: 12 ATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINA 71
S+ T + + + K +H ++ GF ++ +L+ Y G + +A
Sbjct: 130 GVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDA 189
Query: 72 HKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARC 131
KVFE+ S WN M+ G+A + + +++ M EP+ T++ LLS ARC
Sbjct: 190 RKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARC 249
Query: 132 G-----------------------------------LFREGEQVHGRVLASGYCSNVFIR 156
G F EG+ +HG V+ G+ + +F++
Sbjct: 250 GQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVK 309
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIF------ 210
+L+ LY G V AR+LF ++ +++VSWN+L+ Y G D A+ IF
Sbjct: 310 NSLICLY---GKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKT 366
Query: 211 DEMP--HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGD 268
DE P NVVSW+ +I G A G+ +AL LF M+ A+V + V + + LS CAE+
Sbjct: 367 DEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAA 426
Query: 269 LKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTS 328
L LG+ IH +V + G + + N LI+MY G +E VF K++ ++ +SW +
Sbjct: 427 LHLGREIHGHVVRSLMDGN----ILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNT 482
Query: 329 MITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNW 373
M+ G+ G + A+ +TF+ VLSACSH G V EGR+ F+ M + +
Sbjct: 483 MVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEF 542
Query: 374 GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQV 433
++P++EHY CMVDL RAGL+ EA +V++MP++PN V G+LL CR+H N E+A +
Sbjct: 543 RVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEET 602
Query: 434 AQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVL 493
A ++ ++ E A Y+ L++N+YAA+ RW+D A VR G++K PGQSW+Q+ +
Sbjct: 603 ASQIF-NLNSEIAGSYM-LLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKV 660
Query: 494 HDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISE 531
+ F AG++ + + +Y+ L ++ +Q EGY PDI E
Sbjct: 661 YMFSAGNTQHAELEEVYRILKDLGLQMEVEGYIPDIDE 698
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 206/428 (48%), Gaps = 40/428 (9%)
Query: 26 LLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTE---NPS 82
LLQ + + QIHSQII+ G + ++ A++++ Y G + +A +VFE + +
Sbjct: 40 LLQQCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSN 99
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHG 142
+WN ++R + E+++ +Y +M D +T+ ++ CA G + VHG
Sbjct: 100 LLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHG 159
Query: 143 RVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRG 201
V+ G+ N+ + LM +Y G+ G + AR +F+ M RS VSWN+++ GY
Sbjct: 160 HVVEMGFQWNLHVGNELMGMY----GKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNY 215
Query: 202 DIDGAWKIFDEMP----HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
D GA ++F M N+V+WT+++S A+ G+ + + LF MR +G AL
Sbjct: 216 DCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALA 275
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
LS ++ GK IH YV + G E L + N+LI +Y G + A +F +
Sbjct: 276 VVLSVSVDLAAFDEGKVIHGYVVKG---GFENYLF-VKNSLICLYGKHGNVNAARILFLE 331
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
++ +N VSW ++I+ +A G+ EA FL + E ++ ++P
Sbjct: 332 IKTKNIVSWNALISSYADLGWCDEAFAIFLQL-----------------EKTDEYPMVRP 374
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPM---KPNDAVLGSLLLGC----RIHNNAELA 430
+ + ++ F+ G +EA L + M + K N + S+L C +H E+
Sbjct: 375 NVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIH 434
Query: 431 SQVAQKLV 438
V + L+
Sbjct: 435 GHVVRSLM 442
>gi|356559204|ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 619
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 198/598 (33%), Positives = 302/598 (50%), Gaps = 93/598 (15%)
Query: 22 QIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENP 81
+ SLL+ T L QI +QI+ +G +Y+ + G + A +VF+KT P
Sbjct: 24 KFISLLRTCGTCVRLHQIQAQIVTHGLEGNDYVTPSFITACARLGGIRRARRVFDKTAQP 83
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVH 141
+ A WN M RG+A++ V L+ +M P+ +T+ ++ CA +EGE+VH
Sbjct: 84 NGATWNAMFRGYAQANCHLDVVVLFARMHRAGASPNCFTFPMVVKSCATANAAKEGEEVH 143
Query: 142 GRVLASGYCSNVFIRTNLMNLYLMSGG-------------------------ECGVGC-- 174
V G+ SN F+ L+++Y + GG V C
Sbjct: 144 CVVAKRGFKSNTFVGCALIHMYSLRGGVFVADAYKVFAEMRDKNVFAWTAIVAAHVACRD 203
Query: 175 ---ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQN 231
AR LFD P R VV WN ++ GY++ GD+ A ++FD MP R+V+SW T++SG A N
Sbjct: 204 MVSARRLFDLAPQRDVVLWNVVVSGYIELGDMVAARELFDRMPDRDVMSWNTVLSGYATN 263
Query: 232 GKSRQALSLFNEMR-------------RARVGLDQVAL---------------------- 256
G+ + LF EM R GL + AL
Sbjct: 264 GEVESFVKLFEEMPVRNVYSWNGLIGGYVRNGLFKEALECFKRMLVLVEGEGKEGSDGVV 323
Query: 257 -------VAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIE 309
VA L+AC+ +GDL++GKW+H Y E S+G + L + NALI MYA CG IE
Sbjct: 324 VPNDYTVVAVLTACSRLGDLEMGKWVHVYAE---SIGYKGNLF-VGNALIDMYAKCGVIE 379
Query: 310 EAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACS 354
+A VF + ++ ++W ++I G A G+ +AL +TF+G+LSAC+
Sbjct: 380 KALDVFDGLDVKDIITWNTIINGLAMHGHVADALSLFERMKRAGERPDGVTFVGILSACT 439
Query: 355 HGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL 414
H G V G F+ M ++ I P+IEHYGCMVDL RAGL+D+A +V+ MPM+P+ +
Sbjct: 440 HMGLVRNGLLHFQSMVDDYSIVPQIEHYGCMVDLLGRAGLIDKAVDIVRKMPMEPDAVIW 499
Query: 415 GSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMI 474
+LL CR++ N E+A Q+L+ E++P G +V+N+Y R QDVA ++ M
Sbjct: 500 AALLGACRMYKNVEMAELALQRLI-ELEPNN-PGNFVMVSNIYKDLGRSQDVARLKVAMR 557
Query: 475 KMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISEL 532
G RK PG S + N + +F + D + + IY+ L +T+ GY P++ ++
Sbjct: 558 DTGFRKVPGCSVIGCNDSMVEFYSLDERHPETDSIYRALQGLTILLRSHGYVPNLVDV 615
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 304/578 (52%), Gaps = 67/578 (11%)
Query: 12 ATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINA 71
S+ T + + + K +H ++ GF ++ +L+ Y G + +A
Sbjct: 130 GVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDA 189
Query: 72 HKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARC 131
KVFE+ S WN M+ G+A + + +++ M EP+ T++ LLS ARC
Sbjct: 190 RKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARC 249
Query: 132 G-----------------------------------LFREGEQVHGRVLASGYCSNVFIR 156
G F EG+ +HG V+ G+ + +F++
Sbjct: 250 GQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVK 309
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIF------ 210
+L+ LY G V AR+LF ++ +++VSWN+L+ Y G D A+ IF
Sbjct: 310 NSLICLY---GKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKT 366
Query: 211 DEMP--HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGD 268
DE P NVVSW+ +I G A G+ +AL LF M+ A+V + V + + LS CAE+
Sbjct: 367 DEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAA 426
Query: 269 LKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTS 328
L LG+ IH +V + G + + N LI+MY G +E VF K++ ++ +SW +
Sbjct: 427 LHLGREIHGHVVRSLMDGN----ILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNT 482
Query: 329 MITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNW 373
M+ G+ G + A+ +TF+ VLSACSH G V EGR+ F+ M + +
Sbjct: 483 MVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEF 542
Query: 374 GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQV 433
++P++EHY CMVDL RAGL+ EA +V++MP++PN V G+LL CR+H N E+A +
Sbjct: 543 RVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEET 602
Query: 434 AQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVL 493
A ++ ++ E A Y+ L++N+YAA+ RW+D A VR G++K PGQSW+Q+ +
Sbjct: 603 ASQIF-NLNSEIAGSYM-LLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKV 660
Query: 494 HDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISE 531
+ F AG++ + + +Y+ L ++ +Q EGY PDI E
Sbjct: 661 YMFSAGNTQHAELEEVYRILKDLGLQMEVEGYIPDIDE 698
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 206/428 (48%), Gaps = 40/428 (9%)
Query: 26 LLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTE---NPS 82
LLQ + + QIHSQII+ G + ++ A++++ Y G + +A +VFE + +
Sbjct: 40 LLQQCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSN 99
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHG 142
+WN ++R + E+++ +Y +M D +T+ ++ CA G + VHG
Sbjct: 100 LLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHG 159
Query: 143 RVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRG 201
V+ G+ N+ + LM +Y G+ G + AR +F+ M RS VSWN+++ GY
Sbjct: 160 HVVEMGFQWNLHVGNELMGMY----GKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNY 215
Query: 202 DIDGAWKIFDEMP----HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
D GA ++F M N+V+WT+++S A+ G+ + + LF MR +G AL
Sbjct: 216 DCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALA 275
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
LS ++ GK IH YV + G E L + N+LI +Y G + A +F +
Sbjct: 276 VVLSVSVDLAAFDEGKVIHGYVVKG---GFENYLF-VKNSLICLYGKHGNVNAARILFLE 331
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
++ +N VSW ++I+ +A G+ EA FL + E ++ ++P
Sbjct: 332 IKTKNIVSWNALISSYADLGWCDEAFAIFLQL-----------------EKTDEYPMVRP 374
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPM---KPNDAVLGSLLLGC----RIHNNAELA 430
+ + ++ F+ G +EA L + M + K N + S+L C +H E+
Sbjct: 375 NVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIH 434
Query: 431 SQVAQKLV 438
V + L+
Sbjct: 435 GHVVRSLM 442
>gi|356523586|ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 195/573 (34%), Positives = 303/573 (52%), Gaps = 86/573 (15%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH+Q++ Q ++ KL+A + +L +A VF +P+ ++N +IR HA +
Sbjct: 39 QIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIRAHAHNT 98
Query: 98 T-PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
+ P + QM PD +TY FLL C +H V G+ ++F+
Sbjct: 99 SHPSLPFNAFFQMQKNGLFPDNFTYPFLLKACTGPSSLPLVRMIHAHVEKFGFYGDIFVP 158
Query: 157 TNL---------------MNLYL------------MSGG--ECG-VGCARLLFDDMPARS 186
+L M+L+L M GG CG + A LFD+MP R
Sbjct: 159 NSLIDSYSRCGSAGLDGAMSLFLAMKERDVVTWNSMIGGLVRCGELEGACKLFDEMPERD 218
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTM---------------------- 224
+VSWN++L GY K G++D A+++F+ MP RN+VSW+TM
Sbjct: 219 MVSWNTMLDGYAKAGEMDRAFELFERMPQRNIVSWSTMVCGYSKGGDMDMARVLFDRCPA 278
Query: 225 ---------ISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
I+G A+ G R+A L+ +M A + D L++ L+ACAE G L LGK I
Sbjct: 279 KNVVLWTTIIAGYAEKGFVREATELYGKMEEAGLRPDDGFLISILAACAESGMLGLGKRI 338
Query: 276 HSYVEE-NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGF 333
H+ + F G + + NA I MYA CG ++ A+ VF M +++ VSW SMI GF
Sbjct: 339 HASMRRWRFRCGTKVL-----NAFIDMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGF 393
Query: 334 AKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
A G+ ++AL TF+G+L AC+H G V+EGR++F M + +GI P+
Sbjct: 394 AMHGHGEKALELFSRMVPEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSMEKVYGIVPQ 453
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
+EHYGCM+DL R G + EAF+L+++MPM+PN +LG+LL CR+HN+ + A V ++L
Sbjct: 454 VEHYGCMMDLLGRGGHLKEAFTLLRSMPMEPNAIILGTLLNACRMHNDVDFARAVCEQLF 513
Query: 439 AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVA 498
+++P Y +L++N+YA A W +VA VR +M+ G +KP G S +++ +H+F
Sbjct: 514 -KVEPTDPGNY-SLLSNIYAQAGDWMNVANVRLQMMNTGGQKPSGASSIEVEEEVHEFTV 571
Query: 499 GDSTYKQASLIYKTLGEITMQAMQEGYKPDISE 531
D ++ ++ IYK + + Q GY P I +
Sbjct: 572 FDQSHPKSDDIYKMIDRLVQDLRQVGYVPMIHQ 604
>gi|15225375|ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g20540
gi|4586036|gb|AAD25654.1| unknown protein [Arabidopsis thaliana]
gi|67633530|gb|AAY78689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251931|gb|AEC07025.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
Length = 534
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 179/515 (34%), Positives = 298/515 (57%), Gaps = 25/515 (4%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+I++ III+G SQ ++++ K++ F + A ++F + NP+ ++N +IR + +
Sbjct: 28 KINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNS 87
Query: 98 TPEKSVYLYKQMIDKETE-PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
+ +YKQ++ K E PD +T+ F+ CA G G+QVHG + G +V
Sbjct: 88 LYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTE 147
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L+++Y+ A +FD+M R V+SWNSLL GY + G + A +F M +
Sbjct: 148 NALIDMYMKFDDLVD---AHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDK 204
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
+VSWT MISG G +A+ F EM+ A + D+++L++ L +CA++G L+LGKWIH
Sbjct: 205 TIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIH 264
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
Y E + + V NALI MY+ CG I +A +F +M+ ++ +SW++MI+G+A
Sbjct: 265 LYAERRGFLKQTGVC----NALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYH 320
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G A A+ +TFLG+LSACSH G EG ++F+ M Q++ I+P+IEH
Sbjct: 321 GNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEH 380
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YGC++D+ +RAG ++ A + + MPMKP+ + GSLL CR N ++A VA + E+
Sbjct: 381 YGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVA-LVAMDHLVEL 439
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+PE Y+ L+AN+YA +W+DV+ +R+ + ++K PG S +++N ++ +FV+GD+
Sbjct: 440 EPEDMGNYV-LLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDN 498
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGI 536
+ + I L T Q+ + + F+GI
Sbjct: 499 SKPFWTEISIVLQLFTSHQDQDVITNNNALAFIGI 533
>gi|224099171|ref|XP_002311390.1| predicted protein [Populus trichocarpa]
gi|222851210|gb|EEE88757.1| predicted protein [Populus trichocarpa]
Length = 594
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 188/555 (33%), Positives = 306/555 (55%), Gaps = 60/555 (10%)
Query: 25 SLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLL---AFYVTSGYLINAHKVFEKTENP 81
SLLQ K L Q+H+ +I ++ Y +LL A + G L A K+F+ + P
Sbjct: 36 SLLQNCKNPKDLIQLHTLLIKTSLIKEKYAFGRLLLSFASFDNLGSLNYAQKLFDTVDIP 95
Query: 82 STA-IWNQMIRGHARSETPEKSVYLYKQMI--DKETEPDEYTYSFLLSVCARCGLFREGE 138
+ ++ MI+ +A P ++ Y +M+ + P+++T++++ S C++ EG+
Sbjct: 96 RNSFMYTTMIKAYANFGNPREAFAFYSRMLCDQRYVYPNDFTFTYVFSACSKFNGVFEGK 155
Query: 139 QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYV 198
Q H +++ + V +L++ Y GE G+ R +FD + VVSWN L+ GYV
Sbjct: 156 QAHAQMIKFPFEFGVHSWNSLLDFY-GKVGEVGI-VVRRVFDKIEGPDVVSWNCLINGYV 213
Query: 199 KRGDIDGA--------------WKI-----------------FDEMPHRNVVSWTTMISG 227
K GD+D A W I FDEMP RN+VSW+ +I G
Sbjct: 214 KSGDLDEARRLFDEMPERDVVSWTIMLVGYADAGFLSEASCLFDEMPKRNLVSWSALIKG 273
Query: 228 CAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGR 287
Q G +AL LF EM+ A+V +D+V + LSACA +G L G+W+H Y++++
Sbjct: 274 YIQIGCYSKALELFKEMQVAKVKMDEVIVTTLLSACARLGALDQGRWLHMYIDKH----G 329
Query: 288 EPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---- 343
V L+ ALI MY+ CG I+ A+ VF++ + W+SMI G A + ++A+
Sbjct: 330 IKVDAHLSTALIDMYSKCGRIDMAWKVFQETGDKKVFVWSSMIGGLAMHSFGEKAIELFA 389
Query: 344 -----------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRA 392
+T++ +L+AC+H G VD G Q F M +N KPR++HYGC+VDL RA
Sbjct: 390 KMIECGIEPSEITYINILAACTHSGLVDVGLQIFNRMVENQKPKPRMQHYGCIVDLLGRA 449
Query: 393 GLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLAL 452
GL+ +AF +V+ MP+K + A+ +LL C++H N EL QV + L+ +++P+ Y+ L
Sbjct: 450 GLLHDAFRVVETMPVKADPAIWRALLSACKLHRNVELGEQVGRILI-KMEPQNDMNYV-L 507
Query: 453 VANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKT 512
+NVYAA RW +R++M G++K PG S +++NG +H+FV+ D ++ Q+ +IY+
Sbjct: 508 FSNVYAAVNRWDISGKLRREMKVRGMQKNPGCSSIELNGAVHEFVSRDHSHPQSQVIYEL 567
Query: 513 LGEITMQAMQEGYKP 527
L +T +QE ++P
Sbjct: 568 LHILTNHMVQEDHEP 582
>gi|15218900|ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g59720, mitochondrial; Flags: Precursor
gi|332195486|gb|AEE33607.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 194/565 (34%), Positives = 315/565 (55%), Gaps = 71/565 (12%)
Query: 1 MLVEEIIPANPATSSKALTT-----RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKN--- 52
+LV + P P SS + +T ++IFSL + + L Q+H+ + + ++
Sbjct: 24 LLVHPLSPHIPPASSPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATL 83
Query: 53 YILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET-PEKSVYLYKQMID 111
++ K+L + + A +VF+ EN S+ +WN +IR A + E++ LY++M++
Sbjct: 84 FLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLE 143
Query: 112 K-ETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGEC 170
+ E+ PD++T+ F+L CA F EG+QVH +++ G+ +V++ L++LY G C
Sbjct: 144 RGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLY----GSC 199
Query: 171 G-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCA 229
G + AR +FD+MP RS+VSWNS++ V+ G+ D
Sbjct: 200 GCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDS------------------------ 235
Query: 230 QNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREP 289
AL LF EM+R+ D + + LSACA +G L LG W H+++ V
Sbjct: 236 -------ALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVD-VA 286
Query: 290 VLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------ 343
+ V + N+LI MY CG + A VF+ MQ+R+ SW +MI GFA G A+EA+
Sbjct: 287 MDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRM 346
Query: 344 -----------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRA 392
+TF+G+L AC+H GFV++GRQ+F+ M +++ I+P +EHYGC+VDL +RA
Sbjct: 347 VDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARA 406
Query: 393 GLMDEAFSLVQNMPMKPNDAVLGSLLLG-CRIHNNAELASQVAQKLVAEIDPEQA----- 446
G + EA +V +MPMKP+ + SLL C+ + EL+ ++A+ ++ + ++
Sbjct: 407 GYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNC 466
Query: 447 AGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQA 506
+G L++ VYA+A RW DV VR+ M + G+RK PG S ++ING+ H+F AGD+++ Q
Sbjct: 467 SGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQT 526
Query: 507 SLIYKTLGEITMQAMQEGYKPDISE 531
IY+ L I + GY PD S+
Sbjct: 527 KQIYQQLKVIDDRLRSIGYLPDRSQ 551
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 198/550 (36%), Positives = 305/550 (55%), Gaps = 33/550 (6%)
Query: 12 ATSSKALTTRQI--FSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GY 67
+T K L + Q+ FSL ++ + + Q H+ +I G KLL + S G
Sbjct: 6 STFKKPLNSNQLQLFSLESCKSMNQ-IKQTHAHLITTGLILHPITANKLLKVLIASSFGS 64
Query: 68 LINAHKVFEKTENPSTAIWNQMIRGHARSETP-EKSVYLYKQMIDKET-EPDEYTYSFLL 125
L AH++F++ P I+N MI+ HA T S+ ++ M+ P+ YT+ F+
Sbjct: 65 LSYAHQLFDQIPKPDVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVF 124
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPAR 185
C EGEQ+ + G SN+F+ ++ +Y G V AR +FD +
Sbjct: 125 KACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGL---VDEARRVFDWSLDQ 181
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
+ SWN ++ GYV G+I A ++FDEM R+VVSWTT+I+G Q G ++AL LF+EM
Sbjct: 182 DLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEML 241
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC 305
+ ++ L +AL+ACA + L G+WIH Y++++ E +L SL + MYA C
Sbjct: 242 QTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASL----LDMYAKC 297
Query: 306 GEIEEAYGVFRKMQ--RRNTVSWTSMITGFAKQGYAQEAL---------------LTFLG 348
GEI+ A VF + W +MI G+A G ++EA+ +TF+
Sbjct: 298 GEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVA 357
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
+L+ACSHG V+EGR +F+ M ++GI+P IEHYGCMVDL R+GL+ EA V NMPM
Sbjct: 358 LLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMA 417
Query: 409 PNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAA 468
P+ + G+LL CRIH + E ++ K++ E+D + G L+AN+Y+A+ +W + A
Sbjct: 418 PDATIWGALLGACRIHKDIERGQRIG-KIIKELDSDH-IGCHVLLANLYSASGQWDEAKA 475
Query: 469 VRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
VRQK+ G +K PG S +++NGV H F+ GD ++ Q +Y L E+T + GY P+
Sbjct: 476 VRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYVPE 535
Query: 529 ISELFLGIEE 538
E+ L I++
Sbjct: 536 FGEVLLDIDD 545
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 188/520 (36%), Positives = 296/520 (56%), Gaps = 50/520 (9%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
LL+ YV +G + +A ++F+ + WN ++ G+ R + + + L+ +M + D
Sbjct: 190 LLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVR----D 245
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRV----------LASGYCSNVFI-----------R 156
+ +++ +++ A+ GL E ++ + + SG+ N +
Sbjct: 246 KISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPE 305
Query: 157 TNLMNLYLMSGGECG---VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
N ++ M G + AR LFD MP+R+ SWN+++ GY + G+ID A +FDEM
Sbjct: 306 KNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEM 365
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK 273
P R+ +SW MISG AQ+G+S +AL LF +M+R L++ AL ALS+CAEI L+LGK
Sbjct: 366 PQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGK 425
Query: 274 WIHS-YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
+H V+ F G NAL+ MY CG IEEA+ VF + ++ VSW +MI G
Sbjct: 426 QLHGRLVKAGFQTG-----YIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAG 480
Query: 333 FAKQGYAQEAL--------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
+A+ G+ +EAL +T +GVLSACSH GFVD+G ++F M QN+GI
Sbjct: 481 YARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITAN 540
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
+HY CM+DL RAG +DEA +L+++MP P+ A G+LL RIH + EL + A+K V
Sbjct: 541 AKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEK-V 599
Query: 439 AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVA 498
E++P+ + Y+ L++N+YAA+ RW++V +R KM GV+K PG SWV+I H F
Sbjct: 600 FEMEPDNSGMYV-LLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTV 658
Query: 499 GDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
GD ++ +A IY L E+ ++ ++G+ + +EE
Sbjct: 659 GDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEE 698
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 198/453 (43%), Gaps = 94/453 (20%)
Query: 44 IINGFSQKNYILAKLLAFYVTSGYLIN-----AHKVFEKTENPSTAIWNQMIRGHARSET 98
+ NG +++ + + SGYL N A KVFEK + WN M+ G+ ++
Sbjct: 82 VFNGMRRRSTVTYNAM----ISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGN 137
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
+ L+ QM E D +++ +LS A+ G E ++ ++L N
Sbjct: 138 LSAARALFNQM----PEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLV----KNEISWNG 189
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
L++ Y+ +G + AR LFD +VSWN L+ GYV++ +D A +FD MP R+
Sbjct: 190 LLSAYVQNG---RIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDK 246
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
+SW MI+G AQNG +A LF E+ D A A +S + G L I
Sbjct: 247 ISWNIMITGYAQNGLLSEARRLFEELPIR----DVFAWTAMVSGFVQNGMLDEATRIFEE 302
Query: 279 VEENFSVGREPVL-----------------------VSLNNALIHMYASCGEIEEAYGVF 315
+ E V ++ S N ++ YA CG I++A +F
Sbjct: 303 MPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILF 362
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGV---------------LSACS------ 354
+M +R+ +SW +MI+G+A+ G ++EAL F+ + LS+C+
Sbjct: 363 DEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALE 422
Query: 355 -----HGGFVDEGRQ------------FFEC--MNQNWGI-----KPRIEHYGCMVDLFS 390
HG V G Q + +C + + + + + I + M+ ++
Sbjct: 423 LGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYA 482
Query: 391 RAGLMDEAFSLVQNMPM--KPNDAVLGSLLLGC 421
R G EA +L ++M M KP+D L +L C
Sbjct: 483 RHGFGKEALALFESMKMTIKPDDVTLVGVLSAC 515
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 151/362 (41%), Gaps = 72/362 (19%)
Query: 59 LAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDE 118
++ Y+ G +A VF ST +N MI G+ + + + ++++M D++
Sbjct: 67 ISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDL---- 122
Query: 119 YTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLL 178
+ V+ SGY N + AR L
Sbjct: 123 ---------------------ISWNVMLSGYVKN-----------------GNLSAARAL 144
Query: 179 FDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQAL 238
F+ MP + VVSWN++L G+ + G ++ A KIFD+M +N +SW ++S QNG+ A
Sbjct: 145 FNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDAR 204
Query: 239 SLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN-NA 297
LF+ +++ + V+ + L + + R PV ++ N
Sbjct: 205 RLFD----SKMDWEIVSWNCLMGGYVRKKRLDDARSLFD---------RMPVRDKISWNI 251
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFL---------- 347
+I YA G + EA +F ++ R+ +WT+M++GF + G EA F
Sbjct: 252 MITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSW 311
Query: 348 -GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP 406
+++ +++ R+ F+ M + MV +++ G +D+A L MP
Sbjct: 312 NAMIAGYVQSQQIEKARELFDQMPSR-----NTSSWNTMVTGYAQCGNIDQAKILFDEMP 366
Query: 407 MK 408
+
Sbjct: 367 QR 368
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 112/233 (48%), Gaps = 28/233 (12%)
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
+V WN + Y+++G + A +F+ M R+ V++ MISG N K A +F +M
Sbjct: 60 IVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM-- 117
Query: 247 ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCG 306
D ++ LS + G+L + + F+ E +VS NA++ +A G
Sbjct: 118 --PDRDLISWNVMLSGYVKNGNLSAARAL-------FNQMPEKDVVSW-NAMLSGFAQNG 167
Query: 307 EIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLS------ACSHGGFV- 359
+EEA +F +M +N +SW +++ + + G ++A F + C GG+V
Sbjct: 168 FVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVR 227
Query: 360 ----DEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
D+ R F+ M ++ +I + M+ +++ GL+ EA L + +P++
Sbjct: 228 KKRLDDARSLFDRM----PVRDKIS-WNIMITGYAQNGLLSEARRLFEELPIR 275
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 119/249 (47%), Gaps = 33/249 (13%)
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
++V W IS + G+ ALS+FN MRR R + A+++ G L K+
Sbjct: 59 DIVKWNRKISAYMRKGQCESALSVFNGMRR-RSTVTYNAMIS--------GYLSNNKF-- 107
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+ F + L+S N ++ Y G + A +F +M ++ VSW +M++GFA+
Sbjct: 108 DCARKVFEKMPDRDLISW-NVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQN 166
Query: 337 GYAQEAL-----------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCM 385
G+ +EA +++ G+LSA G +++ R+ F+ +W I + C+
Sbjct: 167 GFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDS-KMDW----EIVSWNCL 221
Query: 386 VDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQ 445
+ + R +D+A SL MP++ D + ++++ N L S+ A++L E+
Sbjct: 222 MGGYVRKKRLDDARSLFDRMPVR--DKISWNIMITGYAQNG--LLSE-ARRLFEELPIRD 276
Query: 446 AAGYLALVA 454
+ A+V+
Sbjct: 277 VFAWTAMVS 285
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 13/215 (6%)
Query: 38 QIHSQIIINGFSQKNYILAK-LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
Q+H +++ GF Q YI LLA Y G + A VFE WN MI G+AR
Sbjct: 426 QLHGRLVKAGF-QTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARH 484
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLAS-GYCSNVFI 155
++++ L++ M +PD+ T +LS C+ G +G + + + G +N
Sbjct: 485 GFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKH 543
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMP-ARSVVSWNSLLKGYVKRGDID----GAWKIF 210
T +++L +G + A L MP +W +LL GD + A K+F
Sbjct: 544 YTCMIDLLGRAG---RLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVF 600
Query: 211 DEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
EM N + + + A +G+ R+ + ++MR
Sbjct: 601 -EMEPDNSGMYVLLSNLYAASGRWREVREMRSKMR 634
>gi|334187520|ref|NP_001190262.1| pentatricopeptide repeat (PPR) family protein [Arabidopsis
thaliana]
gi|223635618|sp|P0C8Q7.1|PP369_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08305
gi|332003897|gb|AED91280.1| pentatricopeptide repeat (PPR) family protein [Arabidopsis
thaliana]
Length = 534
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 191/523 (36%), Positives = 298/523 (56%), Gaps = 38/523 (7%)
Query: 14 SSKALTTRQIFSLLQIRNTTKT---LFQIHSQIIINGFSQKNYILAKLLAFYV--TSGYL 68
SS +L + I +R+ K+ L++IH+ +I G S++ +++ L+F +SG +
Sbjct: 4 SSSSLVAKSI-----LRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDV 58
Query: 69 INAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVC 128
A+K K +P WN +IRG + S PEKS+ +Y QM+ PD TY FL+
Sbjct: 59 DYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSS 118
Query: 129 ARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVV 188
+R + G +H V+ SG ++FI L+++Y G AR LFD+MP +++V
Sbjct: 119 SRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMY---GSFRDQASARKLFDEMPHKNLV 175
Query: 189 SWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE-MRRA 247
+WNS+L Y K GD+ A +FDEM R+VV+W++MI G + G+ +AL +F++ MR
Sbjct: 176 TWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMG 235
Query: 248 RVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGE 307
++V +V+ + ACA +G L GK +H Y+ + P+ V L +LI MYA CG
Sbjct: 236 SSKANEVTMVSVICACAHLGALNRGKTVHRYILDV----HLPLTVILQTSLIDMYAKCGS 291
Query: 308 IEEAYGVFRKMQRRNT--VSWTSMITGFAKQGYAQEAL---------------LTFLGVL 350
I +A+ VF + + T + W ++I G A G+ +E+L +TFL +L
Sbjct: 292 IGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLL 351
Query: 351 SACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPN 410
+ACSHGG V E FF+ + ++ G +P+ EHY CMVD+ SRAGL+ +A + MP+KP
Sbjct: 352 AACSHGGLVKEAWHFFKSLKES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPT 410
Query: 411 DAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVR 470
++LG+LL GC H N ELA V +KL+ E+ P Y+ L ANVYA K+++ ++R
Sbjct: 411 GSMLGALLNGCINHGNLELAETVGKKLI-ELQPHNDGRYVGL-ANVYAINKQFRAARSMR 468
Query: 471 QKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTL 513
+ M K GV+K G S + ++G H F+A D T+ + IY L
Sbjct: 469 EAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVL 511
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 186/514 (36%), Positives = 284/514 (55%), Gaps = 27/514 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH I + +S ++ + L+ FY G + A +VF+ E + WN +I + ++
Sbjct: 177 QIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNG 236
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ + +M + +PDE T + ++S CA F+EG Q+H RV+ S N I
Sbjct: 237 PAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILG 296
Query: 158 N-LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
N L+++Y +CG V AR +FD MP R+ VS +++ GY K + A +F +
Sbjct: 297 NALVDMY----AKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQ 352
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
+++VSW +I+G QNG++ +AL LF ++R V L+A A + DL+LG+
Sbjct: 353 KDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQA 412
Query: 276 HSYVEEN---FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
HS+V ++ F G EP + + N+LI MY CG +EE VF M ++ VSW +MI G
Sbjct: 413 HSHVVKHGFRFQSGEEPDIF-VGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIG 471
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
+A+ GY EAL +T +G L ACSH G V+EGR++F M + G+ P
Sbjct: 472 YAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLP 531
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
+HY CMVDL RAG ++EA L+++MP +P+ V SLL C++H N L VA+K+
Sbjct: 532 VKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHRNITLGKYVAEKI 591
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
EIDP + Y+ L+AN+Y+ RW D +VR+ M + GV K PG SW+ I +H F+
Sbjct: 592 F-EIDPTSSGPYV-LLANMYSELGRWGDAVSVRKLMRRRGVVKQPGCSWIDIQSNVHVFM 649
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQEGYKPDISE 531
D + Q IY L +T Q GY PD S+
Sbjct: 650 VKDKRHPQKKEIYSILKLLTKHMRQAGYVPDASD 683
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 183/355 (51%), Gaps = 31/355 (8%)
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCA 175
D ++ LL +C + R+ VHGR++ + +C VFI+ L+++Y G+CG + A
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVY----GKCGYLDYA 78
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
R +FD M R+V S+NS++ ++ G +D + +F MP ++ SW +MI+G AQ+ +
Sbjct: 79 RKVFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFE 138
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
+AL F M R L+ + + LSAC+ + DLKLG IH + S + + V +
Sbjct: 139 EALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLI----SKSKYSLDVFMG 194
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------ 343
+ LI Y+ CG + A VF M+ +N VSW +IT + + G A EAL
Sbjct: 195 SGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFK 254
Query: 344 ---LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFS 400
+T V+SAC+ EG Q + ++ + + +VD++++ G ++EA
Sbjct: 255 PDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARC 314
Query: 401 LVQNMPMKPNDAVLGSLLLGCRIHNNAELAS-QVAQKLVAEIDPEQAAGYLALVA 454
+ MP++ +AV + + + A+ AS + A+ + A I + + AL+A
Sbjct: 315 VFDRMPVR--NAVSETTM----VSGYAKSASVKAARSMFATIKQKDIVSWNALIA 363
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 156/347 (44%), Gaps = 70/347 (20%)
Query: 32 TTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPST-------- 83
+++ +H ++I F ++ +I +L+ Y GYL A KVF++ +
Sbjct: 39 SSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSERNVFSFNSIIS 98
Query: 84 -----------------------AIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
WN MI G A+ + E+++ + +M + ++Y+
Sbjct: 99 TLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYS 158
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLF 179
+ LS C+R + G Q+HG + S Y +VF+ + L++ Y +CG VGCAR +F
Sbjct: 159 FGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFY----SKCGLVGCARRVF 214
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
D M ++VVSWN L+ Y QNG + +AL
Sbjct: 215 DGMEEKNVVSWNCLITCY-------------------------------EQNGPAIEALE 243
Query: 240 LFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
F M D+V L + +SACA + K G IH+ V ++ + + L NAL+
Sbjct: 244 AFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLI---LGNALV 300
Query: 300 HMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
MYA CG + EA VF +M RN VS T+M++G+AK + A F
Sbjct: 301 DMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMF 347
>gi|125537150|gb|EAY83638.1| hypothetical protein OsI_38867 [Oryza sativa Indica Group]
Length = 914
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 194/585 (33%), Positives = 307/585 (52%), Gaps = 69/585 (11%)
Query: 8 PANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY 67
P A S + L + + SL + + ++H+Q++ G A+L++ Y
Sbjct: 340 PTWGAPSQRRLVEQHLASLPRGLPRAAHVRELHAQVLKQGLHLNPRAAARLVSAYALLRL 399
Query: 68 LINAHKVFEKTENPSTAIW--NQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
L ++ +VF+ +P + N M+R +A P ++ + M + D +TYSFL+
Sbjct: 400 LPSSRRVFDAIRDPHADAFLANTMLRAYALGGAPRDALAAFSAMPRR----DSFTYSFLI 455
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGG----------------- 168
+ G+ VH V+ G + F+ L++ Y +GG
Sbjct: 456 KALSAAGVA-PVRAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVV 514
Query: 169 -----------ECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
E + AR LFD+MP + VSWN++L GY K G+++ A+++F MP RN
Sbjct: 515 SWNTAMAAMVREGELAGARKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERN 574
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEM------------RRARVGLDQVALVAALSACAE 265
VVSW+TM+SG + G A +F++M + A V LD A+V+ L+ACAE
Sbjct: 575 VVSWSTMVSGYCKKGDLEMARVIFDKMPGKNLVTWTIMMKEASVELDVAAVVSILAACAE 634
Query: 266 IGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF-RKMQRRNTV 324
G L LGK IH YV + ++GR + NALI M+ CG + A VF + ++++V
Sbjct: 635 SGSLSLGKRIHRYVRKR-NLGRS---THVCNALIDMFCKCGCVNRADYVFDTETVQKDSV 690
Query: 325 SWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECM 369
SW S+I GFA G+ +AL +T + VLSAC+H GFVDEGR++F M
Sbjct: 691 SWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRYFSNM 750
Query: 370 NQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAEL 429
+++GI P+IEHYGCM+DL R GL+ EA L+++MP +PN+ + GSLL CR+H N E
Sbjct: 751 ERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEY 810
Query: 430 ASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQI 489
A ++A ++++ P A Y A+++N+YA A +W D+A R +M G +K G SWV++
Sbjct: 811 A-EIAVNELSKLQPSNAGNY-AVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVEL 868
Query: 490 NGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFL 534
N H+F GD ++ + I + + ++ G P EL +
Sbjct: 869 NETFHEFTVGDRKHQDSDQISEMVDRLSSHVKHVGCVPAGHELLV 913
>gi|147799847|emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
Length = 546
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 188/534 (35%), Positives = 296/534 (55%), Gaps = 76/534 (14%)
Query: 19 TTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKT 78
TT I +LL+ TT TL Q+H++II G Q ++++++ L + VF
Sbjct: 24 TTSSISTLLKACTTTSTLEQVHARIIRKGLHQDHFLISQFLTLCNSLSNFSYTTSVFNGV 83
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR-CGLFREG 137
+PST +WN I+G++ + + +V L+ +M + PD++TY L+ C++ CG+ +EG
Sbjct: 84 SSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGV-KEG 142
Query: 138 EQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARL------------------- 177
HG + G +VF+ T+L++LY G+CG + CAR
Sbjct: 143 VAFHGSAVRCGVGGDVFVMTSLIDLY----GKCGEILCARKVFDEMGERNVVSWTAMIAG 198
Query: 178 ------------LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMI 225
LFD+MP ++ VSWN+++ GYVK GD+ A K+FDEMPHRNVVS+TTMI
Sbjct: 199 YASFSDLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMI 258
Query: 226 SGCAQNGKSRQALSLFNEMRRA----------------RVGLDQVALVAALSACAEIGDL 269
G A++G A +F E V D+ +V+ +SAC+++G L
Sbjct: 259 DGYAKSGDMASARFVFEEAPERDVVAWSALIFRVCAEWNVKPDEFIMVSLMSACSQMGSL 318
Query: 270 KLGKWIHSYVEEN-FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTS 328
+L KW+ YV ++ V R V+ ALI M A CG ++ A +F +M +R+ +S+ S
Sbjct: 319 ELAKWVDDYVRKSSIDVHRAHVIA----ALIDMNAKCGSMDRATKLFEEMPKRDLISYCS 374
Query: 329 MITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNW 373
M+ G + G +A+ + F +L+ACS G VDEG +FE M ++
Sbjct: 375 MMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDY 434
Query: 374 GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQV 433
I P +HY CMVDL RAG + EA+ L+++MP++P+ G+LL C++H + EL V
Sbjct: 435 SIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVV 494
Query: 434 AQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWV 487
A +L E++P+ A Y+ L++N+YAAA++W DV+ +R KM + G+RK PG SW+
Sbjct: 495 ADQLF-ELEPQNAGNYV-LLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 546
>gi|255564780|ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537334|gb|EEF38963.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 538
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 187/539 (34%), Positives = 301/539 (55%), Gaps = 29/539 (5%)
Query: 14 SSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHK 73
SS + +Q+ LL + K L Q H+ ++ N +L+ + + G+ + A+
Sbjct: 5 SSSSGAVKQVIWLLNHCSNLKHLHQTHAFMLCRALDHDNLLLSLFIQSSSSLGFSLYAYS 64
Query: 74 VFEK-TENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCG 132
+F T P+ ++N +IR + S P S++L+ ++ PD Y++ F L R
Sbjct: 65 LFTSLTHPPNIFLYNTIIRALSLSPQPSLSIFLFNRIQSARLRPDSYSFPFALKAVIRLS 124
Query: 133 LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMP--ARSVVSW 190
+ G Q H + + G S++ + +L+ +Y + AR LFD +P AR+V W
Sbjct: 125 ATKTGLQFHSQAIRFGLHSHLHVLVSLIRMY----SSSHISDARKLFDGIPLTARNVALW 180
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG 250
N++L Y K D+ A +FD MP RN++SWT +ISG A + QA+++F M+ V
Sbjct: 181 NAMLTSYAKICDMPNAQHLFDSMPQRNLISWTALISGYAHINRPHQAIAIFRTMQLQNVV 240
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEE 310
D++ L+A LSACA++G L+LG+WI +Y++ + + R V L+NALI MYA G I+
Sbjct: 241 PDEITLLAVLSACAQLGALELGEWIRNYIDIH-GLHRN---VPLHNALIDMYAKSGNIKR 296
Query: 311 AYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSH 355
A +F M+ + V+WT+MI G A G +AL +TF+ VLSACSH
Sbjct: 297 ALLIFESMKHKTIVTWTTMIAGLALHGLGTQALEMFSRMERDRVKPNEITFIAVLSACSH 356
Query: 356 GGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLG 415
G V R FF M + I+P+IEHYGCM+DL RAG + EA L+Q MP +PN A+ G
Sbjct: 357 VGLVQLARSFFTNMRSRYTIQPKIEHYGCMIDLLGRAGYLQEAQQLLQQMPFEPNAAIWG 416
Query: 416 SLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIK 475
SLL H +A L + + L+ E++P + Y AL++N+YA+ RW+ VR+ M
Sbjct: 417 SLLAASYTHGDAMLGERTLKHLI-ELEPNNSGNY-ALLSNIYASLGRWKASRIVRKMMRD 474
Query: 476 MGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQA-MQEGYKPDISELF 533
GV+K PG S++++N +++F+AG++++ Q IY+ + +I Q+ + E + + EL
Sbjct: 475 RGVKKIPGGSFIEVNNRVNEFIAGETSHPQFDEIYEVIYKINEQSRLSESLEKECFELL 533
>gi|357444867|ref|XP_003592711.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481759|gb|AES62962.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 184/529 (34%), Positives = 302/529 (57%), Gaps = 32/529 (6%)
Query: 23 IFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV--TSGYLINAHKVFEKTEN 80
+ SLL + L ++H+ I G S + + K+L+F SG + +++VF + +
Sbjct: 17 LLSLLDKCKSMLELKKLHAIGISYGLSHEYSFIFKILSFSALSNSGDIDYSYRVFSQISS 76
Query: 81 PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
P+ WN +IRG++ S+ P S+ ++ +M+ PD TY FL+ AR + G V
Sbjct: 77 PTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYLTYPFLVKASARLSKQKSGVSV 136
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVK 199
H +++ +G+ S+ FI+ +L+++Y CG + A +F+ M +++VSWNS+L GY K
Sbjct: 137 HAQIIKTGHESDRFIQNSLIHMY----ASCGNIMWAHKVFESMQGKNLVSWNSMLDGYAK 192
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
G++ A K+F+ M R+V SW++ I G + G+ R+A+++F +MR ++V +V+
Sbjct: 193 CGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
LSACA +G L+ G+ +H Y+ +N P+ + L +L+ MYA CG IEEA VFR +
Sbjct: 253 LSACAHLGALQKGRMMHQYIIDNLL----PMTMVLQTSLVDMYAKCGAIEEALFVFRGIS 308
Query: 320 RRNT--VSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEG 362
+ T W +MI G A G +E+L +T+L +L+AC+HGG V E
Sbjct: 309 KSQTDVFIWNAMIGGLATHGLVEESLKLFKEMQMAGIRSDEITYLCLLAACAHGGLVKEA 368
Query: 363 RQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCR 422
FFE + + G+ P EHY CMVD+ +RAG + A+ + +P++P ++LG++ GC
Sbjct: 369 WNFFESLVKR-GMTPTSEHYACMVDVLARAGQLTTAYQFICQIPIEPTASMLGAIFSGCI 427
Query: 423 IHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPP 482
H N +LA V +KL+ E+DP Y+ L +NVYA KRW D ++R+ M + GV+K P
Sbjct: 428 NHRNFDLAETVGRKLI-ELDPNNDGRYIGL-SNVYAVVKRWDDSKSMREAMERRGVKKSP 485
Query: 483 GQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISE 531
G S+V+I+ + H F+A D T+ + Y L + Q M+ G D E
Sbjct: 486 GFSFVEISEIHHRFIAHDKTHPDSDETYSMLHFVVCQ-MKHGCPQDNQE 533
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 182/506 (35%), Positives = 284/506 (56%), Gaps = 27/506 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIHS I + YI + L+ Y G + +A +VF++ + + WN +I + ++
Sbjct: 173 QIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNG 232
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ +++ M++ EPDE T + ++S CA + G++VH RV+ N I +
Sbjct: 233 PAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILS 292
Query: 158 N-LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
N +++Y +C + AR +FD MP R+V++ S++ GY A +F +M
Sbjct: 293 NAFVDMY----AKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAE 348
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
RNVVSW +I+G QNG++ +ALSLF ++R V L ACA++ DL LG
Sbjct: 349 RNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQA 408
Query: 276 HSYVEEN---FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
H +V ++ F G E + + N+LI MY CG +EE Y VFRKM R+ VSW +MI G
Sbjct: 409 HVHVLKHGFKFQSGEEDDIF-VGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIG 467
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
FA+ GY EAL +T +GVLSAC H GFV+EGR +F M +++G+ P
Sbjct: 468 FAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAP 527
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
+HY CMVDL RAG ++EA S+++ MP++P+ + GSLL C++H N L VA+KL
Sbjct: 528 LRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRNITLGKYVAEKL 587
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
E++ + Y+ L++N+YA +W D VR+ M K GV K PG SW++I G H F+
Sbjct: 588 F-EVETSNSGPYV-LLSNMYAELGKWGDAMNVRKLMRKEGVTKQPGCSWIKIPGHAHVFM 645
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQE 523
D ++ + I+ L + + Q+
Sbjct: 646 VKDKSHPRKKQIHSLLDILIAEMRQK 671
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 150/287 (52%), Gaps = 28/287 (9%)
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYV 198
VH V+ SG+ + VFI+ L++ Y +CG + R LFD MP R+V +WNS++ G
Sbjct: 42 VHASVIKSGFSNEVFIQNRLIDAY----AKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLT 97
Query: 199 KRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVA 258
K G +D A +F MP R+ +W +M+SG AQ+ + +AL F M + L++ +
Sbjct: 98 KLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFAS 157
Query: 259 ALSACAEIGDLKLGKWIHSYVEENFSVGREPVL--VSLNNALIHMYASCGEIEEAYGVFR 316
LSAC+ + D+ G IHS + + P L V + +AL+ MY+ CG + +A VF
Sbjct: 158 GLSACSGLNDMNRGVQIHSL------IAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFD 211
Query: 317 KMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDE 361
+M RN VSW S+IT + + G A EAL +T V+SAC+ +
Sbjct: 212 EMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKV 271
Query: 362 GRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
G++ + + ++ I VD++++ + EA + +MP++
Sbjct: 272 GQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 165/354 (46%), Gaps = 70/354 (19%)
Query: 25 SLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPST- 83
S ++++ + + +H+ +I +GFS + +I +L+ Y G L + ++F+K +
Sbjct: 28 SCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVF 87
Query: 84 ------------------------------AIWNQMIRGHARSETPEKSVYLYKQMIDKE 113
WN M+ G A+ + E+++Y + M +
Sbjct: 88 TWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEG 147
Query: 114 TEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-V 172
+EYT++ LS C+ G Q+H + S S+V+I + L+++Y +CG V
Sbjct: 148 FVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMY----SKCGNV 203
Query: 173 GCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNG 232
A+ +FD+M R+VVSWNSL+ Y QNG
Sbjct: 204 NDAQQVFDEMGDRNVVSWNSLITCY-------------------------------EQNG 232
Query: 233 KSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLV 292
+ +AL +F M + V D+V L + +SACA + +K+G+ +H+ V + + + +
Sbjct: 233 PAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDII-- 290
Query: 293 SLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
L+NA + MYA C I+EA +F M RN ++ TSM++G+A + A L F
Sbjct: 291 -LSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMF 343
>gi|110737061|dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 194/565 (34%), Positives = 315/565 (55%), Gaps = 71/565 (12%)
Query: 1 MLVEEIIPANPATSSKALTT-----RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKN--- 52
+LV + P P SS + +T ++IFSL + + L Q+H+ + + ++
Sbjct: 15 LLVHPLSPHIPPASSPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATL 74
Query: 53 YILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET-PEKSVYLYKQMID 111
++ K+L + + A +VF+ EN S+ +WN +IR A + E++ LY++M++
Sbjct: 75 FLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLE 134
Query: 112 K-ETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGEC 170
+ E+ PD++T+ F+L CA F EG+QVH +++ G+ +V++ L++LY G C
Sbjct: 135 RGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLY----GSC 190
Query: 171 G-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCA 229
G + AR +FD+MP RS+VSWNS++ V+ G+ D
Sbjct: 191 GCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDS------------------------ 226
Query: 230 QNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREP 289
AL LF EM+R+ D + + LSACA +G L LG W H+++ V
Sbjct: 227 -------ALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVD-VA 277
Query: 290 VLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------ 343
+ V + N+LI MY CG + A VF+ MQ+R+ SW +MI GFA G A+EA+
Sbjct: 278 MDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRM 337
Query: 344 -----------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRA 392
+TF+G+L AC+H GFV++GRQ+F+ M +++ I+P +EHYGC+VDL +RA
Sbjct: 338 VDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARA 397
Query: 393 GLMDEAFSLVQNMPMKPNDAVLGSLLLG-CRIHNNAELASQVAQKLVAEIDPEQA----- 446
G + EA +V +MPMKP+ + SLL C+ + EL+ ++A+ ++ + ++
Sbjct: 398 GYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNC 457
Query: 447 AGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQA 506
+G L++ VYA+A RW DV VR+ M + G+RK PG S ++ING+ H+F AGD+++ Q
Sbjct: 458 SGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQT 517
Query: 507 SLIYKTLGEITMQAMQEGYKPDISE 531
IY+ L I + GY PD S+
Sbjct: 518 KQIYQQLKVIDDRLRSIGYLPDRSQ 542
>gi|15241448|ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230
gi|9759524|dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|91806984|gb|ABE66219.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332007694|gb|AED95077.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 186/542 (34%), Positives = 298/542 (54%), Gaps = 32/542 (5%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLIN-- 70
++ K L + S L + QIH ++ G Q YIL KL+ G ++
Sbjct: 42 SNQKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPY 101
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
A +V E + + +W +IRG+A ++++ +Y M +E P +T+S LL C
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 131 CGLFREGEQVHGRVLA-SGYCSNVFIRTNLMNLYLMSGGEC-GVGCARLLFDDMPARSVV 188
G Q H + G+C V++ ++++Y+ +C + CAR +FD+MP R V+
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCF-VYVGNTMIDMYV----KCESIDCARKVFDEMPERDVI 216
Query: 189 SWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR 248
SW L+ Y + G+++ A ++F+ +P +++V+WT M++G AQN K ++AL F+ M ++
Sbjct: 217 SWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSG 276
Query: 249 VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPV-LVSLNNALIHMYASCGE 307
+ D+V + +SACA++G K+ V+ G P V + +ALI MY+ CG
Sbjct: 277 IRADEVTVAGYISACAQLG---ASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGN 333
Query: 308 IEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLS 351
+EEA VF M +N +++SMI G A G AQEAL +TF+G L
Sbjct: 334 VEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALM 393
Query: 352 ACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPND 411
ACSH G VD+GRQ F+ M Q +G++P +HY CMVDL R G + EA L++ M ++P+
Sbjct: 394 ACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHG 453
Query: 412 AVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQ 471
V G+LL CRIHNN E+A A+ L E++P+ Y+ L++NVYA+A W V VR+
Sbjct: 454 GVWGALLGACRIHNNPEIAEIAAEHLF-ELEPDIIGNYI-LLSNVYASAGDWGGVLRVRK 511
Query: 472 KMIKMGVRKPPGQSW-VQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
+ + G++K P SW V NG +H F G+ + ++ I L E+ + GY+PD+S
Sbjct: 512 LIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLS 571
Query: 531 EL 532
+
Sbjct: 572 SV 573
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 177/487 (36%), Positives = 275/487 (56%), Gaps = 30/487 (6%)
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
+V G + A FE+ + +WN MI G+ +S ++ L+++M+ K PDE+T+
Sbjct: 240 HVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTF 299
Query: 122 SFLLSVCARCGLFREGEQVHGRV--LASGYCSNVFIRTN--LMNLYLMSGGECGVGCARL 177
+ LLS CA G F G+ VHG+ L + + N L+ LY SG + A
Sbjct: 300 TSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGK---IAVATK 356
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
+FD M + VVSWN++L GY++ G +D A +IF EMP+++ +SW M+SG G + A
Sbjct: 357 IFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDA 416
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY-VEENFSVGREPVLVSLNN 296
L LFN+MR V A++AC E+G LK GK +H++ V+ F S N
Sbjct: 417 LKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASN-----SAGN 471
Query: 297 ALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------- 343
AL+ MYA CG +++A VF M ++VSW +MI+ + G+ +EAL
Sbjct: 472 ALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYP 531
Query: 344 --LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
++FL +L+AC+H G VD+G Q+FE M +++GI P +HY ++DL RAG + EA L
Sbjct: 532 DRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDL 591
Query: 402 VQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAK 461
++ MP +P A+ ++L GCRI+ + EL + A +L + PE Y+ L++N Y+AA
Sbjct: 592 IKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMV-PEHDGTYI-LLSNTYSAAG 649
Query: 462 RWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAM 521
RW D A VR+ M GV+K PG SW+++ +H F+ GD+ + A +Y+ L + +
Sbjct: 650 RWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDTKHPDAHEVYRFLEMVGAKMR 709
Query: 522 QEGYKPD 528
+ GY PD
Sbjct: 710 KLGYVPD 716
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 159/338 (47%), Gaps = 20/338 (5%)
Query: 58 LLAFYVTSGYLINAHKVFEKTE--NPSTAIWNQMIRGHARSETPEKSVYLYKQMI--DKE 113
L++ Y +G L ++ F+ T + N MI AR+ +V +++ ++ D
Sbjct: 95 LVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDDS 154
Query: 114 TEPDEYTYSFLLSVCARCG--LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG 171
PD+Y+++ LLS + Q+H V G + + + L+ LY+
Sbjct: 155 LRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGV 214
Query: 172 VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQN 231
AR + D+MP + ++W +++ G+V++GD+ A F+E+ V W MISG Q+
Sbjct: 215 TRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQS 274
Query: 232 GKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS-YVEENFSVGREPV 290
G +A LF M R+ D+ + LSACA G GK +H ++ E
Sbjct: 275 GMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAA 334
Query: 291 LVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------- 343
L +NNAL+ +Y+ G+I A +F M ++ VSW ++++G+ + G A
Sbjct: 335 L-PVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMP 393
Query: 344 ----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
L+++ ++S HGG ++ + F M +KP
Sbjct: 394 YKSELSWMVMVSGYVHGGLAEDALKLFNQMRSE-DVKP 430
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 137/314 (43%), Gaps = 46/314 (14%)
Query: 27 LQIRNTTKTLFQIHSQI-----IINGFSQKNYI-LAKLLAFYVTSGYLINAHKVFEKTEN 80
L + N TL+ +I I + + K+ + +L+ Y+ SG L NA ++F++
Sbjct: 335 LPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPY 394
Query: 81 PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
S W M+ G+ E ++ L+ QM ++ +P +YTY+ ++ C G + G+Q+
Sbjct: 395 KSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQL 454
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVK 199
H ++ G+ ++ L+ +Y CG V ARL+F MP VSWN+
Sbjct: 455 HAHLVQCGFEASNSAGNALLTMY----ARCGAVKDARLVFLVMPNVDSVSWNA------- 503
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
MIS Q+G R+AL LF++M + D+++ +
Sbjct: 504 ------------------------MISALGQHGHGREALELFDQMVAQGIYPDRISFLTI 539
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
L+AC G + G +E +F + LI + G I EA + + M
Sbjct: 540 LTACNHAGLVDDGFQYFESMERDFGISPGE---DHYARLIDLLGRAGRIGEARDLIKTMP 596
Query: 320 RRNTVS-WTSMITG 332
T + W ++++G
Sbjct: 597 FEPTPAIWEAILSG 610
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 193/554 (34%), Positives = 301/554 (54%), Gaps = 67/554 (12%)
Query: 9 ANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--- 65
+P S+ + Q+ SL++ + L QIH+ II Q ++I + L+ S
Sbjct: 57 THPLPKSRDESENQLISLIKSCSKKTHLLQIHAHIIRTSLIQNHFISLQFLSRAALSPSR 116
Query: 66 --GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSF 123
GY + +VF + PS + +N MIR ++ S +PE+ YLY++M + P+ + SF
Sbjct: 117 DMGY---SSQVFSQIMKPSGSQYNVMIRAYSMSHSPEQGFYLYREMRRRGVPPNPLSSSF 173
Query: 124 LLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMP 183
++ C R G Q+H R+L G+ S+ + T LM+LY C C +
Sbjct: 174 VMKSCIRISSLMGGLQIHARILRDGHQSDNLLLTTLMDLY-----SC---CDKF------ 219
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
+ A K+FDE+P + VSW +IS C N ++R AL +F+
Sbjct: 220 --------------------EEACKVFDEIPQWDTVSWNVLISCCIHNRRTRDALRMFDI 259
Query: 244 MRRARVGL--DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHM 301
M+ G D V + L ACA +G L+ G+ +H+Y+EE+ G ++L N+LI M
Sbjct: 260 MQSTADGFEPDDVTCLLLLQACANLGALEFGERVHNYIEEHGYDG----ALNLCNSLITM 315
Query: 302 YASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF--------------- 346
Y+ CG +E+AY +F++M RN VSW++MI+GFA GY +EA+ F
Sbjct: 316 YSRCGRLEKAYSIFKRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDDQTL 375
Query: 347 LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP 406
GVLSACSH G VD+G FF+ M++ +GI+P I HYGCMVDL RAGL+D+A+ L+ +M
Sbjct: 376 TGVLSACSHCGLVDDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLIMSMV 435
Query: 407 MKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDV 466
+KP+ + +LL CRIH +A L +V L+ E+ ++A Y+ L+ N+Y++ W V
Sbjct: 436 IKPDSTLWRTLLGACRIHRHATLGERVIGHLI-ELKAQEAGDYV-LLLNIYSSVGNWDKV 493
Query: 467 AAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYK 526
+R+ M + G++ PG S +++ G +H+FV D + + IY+ L EI Q GY
Sbjct: 494 TDLRKFMKEKGIQTSPGCSTIELKGKVHEFVVDDILHPRTDEIYEMLDEIGKQLKIAGYV 553
Query: 527 PDI-SELF-LGIEE 538
++ SEL LG EE
Sbjct: 554 AELSSELHNLGAEE 567
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 185/510 (36%), Positives = 287/510 (56%), Gaps = 27/510 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIHS + + + Y+ + L+ Y G + A VF++ S WN +I + ++
Sbjct: 172 QIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNG 231
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++++ ++ +MI EPDE T + ++S CA +EG+Q+H RV+ N I
Sbjct: 232 PVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILG 291
Query: 158 N-LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
N L+++Y +C + AR++FD MP RSVVS S++ GY K + A +F M
Sbjct: 292 NALLDMY----AKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMV 347
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
++V++W +I+GC QNG++ +AL LF ++R V L+ACA + DL+LG+
Sbjct: 348 KDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQA 407
Query: 276 HSYVEEN---FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
HS+V ++ F G E V + N+LI MY CG +E VF+ M ++ VSW +MI G
Sbjct: 408 HSHVLKHGFRFQYG-EDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVG 466
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
+A+ G+ +AL +T +GVL ACSH G +DEGR +F M G+ P
Sbjct: 467 YAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMP 526
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
+HY CMVDL RAG ++EA +L++ M M+P+ V GSLL C++H N +L V +KL
Sbjct: 527 LKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKL 586
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
+ E+DPE + Y+ L++N+YA + W++V VR+ M + GV K PG SW++I G L+ F+
Sbjct: 587 L-EVDPENSGPYV-LLSNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFM 644
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
D + + IY L I Q Q GY P
Sbjct: 645 VKDKRHARKKEIYMVLRTILQQMKQAGYVP 674
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/308 (33%), Positives = 166/308 (53%), Gaps = 24/308 (7%)
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCA 175
D +S LL+ CAR R+ +VH ++ S + S FI+ L+++Y G+CG V A
Sbjct: 18 DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVY----GKCGCVDVA 73
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
R LFD M R++ SWNS++ + K G +D A IF++MP + SW +MISG Q+G+
Sbjct: 74 RKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFD 133
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
+AL F +M +++ + +ALSACA + DLKLG IHS V + + V +
Sbjct: 134 EALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSD----VYMG 189
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------ 343
+AL+ MY+ CG +E A VF +M R+ VSW S+IT + + G EAL
Sbjct: 190 SALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVE 249
Query: 344 ---LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFS 400
+T V+SAC+ + EG+Q + + + + ++D++++ ++EA
Sbjct: 250 PDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARI 309
Query: 401 LVQNMPMK 408
+ MP++
Sbjct: 310 IFDMMPIR 317
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 154/326 (47%), Gaps = 50/326 (15%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
++ + SG+L +A +FEK WN MI G + ++++ + QM +
Sbjct: 91 IICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVN 150
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCAR 176
EY++ LS CA + G Q+H V S Y S+V++ + L+++Y +CG V A+
Sbjct: 151 EYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMY----SKCGRVEYAQ 206
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
+FD+M RS VSWNSL+ Y + G +D A KIF EM
Sbjct: 207 SVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMI---------------------- 244
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
+ V D+V L + +SACA I +K G+ IH+ V + + + L N
Sbjct: 245 ---------KCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLI---LGN 292
Query: 297 ALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEA-----------LLT 345
AL+ MYA C I EA +F M R+ VS TSM++G+AK + A ++T
Sbjct: 293 ALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVIT 352
Query: 346 FLGVLSACSHGGFVDEGRQFFECMNQ 371
+ +++ C+ G +E F + +
Sbjct: 353 WNALIAGCTQNGENEEALILFRLLKR 378
>gi|296084034|emb|CBI24422.3| unnamed protein product [Vitis vinifera]
Length = 502
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 183/465 (39%), Positives = 274/465 (58%), Gaps = 19/465 (4%)
Query: 72 HKVFEKTENPSTAI--WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
H T +P I W I H R+ ++ + +M P+ T+ LLS C
Sbjct: 41 HLTRSHTHSPIDPIVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACT 100
Query: 130 RCGL--FREGEQVHGRVLASGY-CSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPAR 185
L R G +H V G NV + T L+++Y +CG + A L+FD+M R
Sbjct: 101 DFPLEGLRFGGSIHAYVRKLGLDTENVMVGTALVDMY----SKCGQLDLAWLMFDEMHVR 156
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
+ VSWN+++ G ++ G++ A +FD+M R+ +SWT+MI G + G QAL F EM+
Sbjct: 157 NSVSWNTMIDGCMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQ 216
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYV-EENFSVGREPVLVSLNNALIHMYAS 304
A V D V +++ L+ACA +G L LG WI+ +V +++F + ++N+LI MY+
Sbjct: 217 LAGVEPDYVTIISVLAACANLGALGLGLWINRFVMKQDFKDN-----IKISNSLIDMYSR 271
Query: 305 CGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQ 364
CG I A VF +M +R+ VSW SMI GFA G+A+EAL F ++ H G VDEG Q
Sbjct: 272 CGCIRLARQVFEQMPKRSLVSWNSMIVGFALNGHAEEAL-EFFNLMRKEGHSGLVDEGLQ 330
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
FF+ M + I PRIEHYGC+VDL+SRAG +++A +++ NMPMKPN+ VLGSLL CR H
Sbjct: 331 FFDIMKRTRKISPRIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACRTH 390
Query: 425 NNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQ 484
+ LA ++ K + E+DP + Y+ L++N+YAA RW + VR+KM +G+ K PG
Sbjct: 391 GDVGLAERL-MKYLCEVDPGSDSNYV-LLSNIYAAVGRWDGASKVRKKMKALGIHKKPGF 448
Query: 485 SWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDI 529
S ++++G +H+FVAGD T+ + IY L + ++ GY P+I
Sbjct: 449 SSIEMDGSIHEFVAGDKTHVETQNIYAMLDHLFLELRICGYVPEI 493
>gi|357501951|ref|XP_003621264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496279|gb|AES77482.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 519
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 191/506 (37%), Positives = 282/506 (55%), Gaps = 56/506 (11%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTS-------GYLIN-AHKVFEKTENPSTAI 85
KTL QIH+ +IINGF+ L L+ TS + N AH++F + P T +
Sbjct: 16 KTLKQIHALMIINGFNNNVNFLGDLVLTISTSLVGPTATPTVTNYAHQLFAQIPQPDTFM 75
Query: 86 WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVL 145
+N MIRG ++S P +++ LY +M + D YT+ F+L C R G VHG VL
Sbjct: 76 YNVMIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKACTRLFWVNTGSAVHGMVL 135
Query: 146 ASGYCSNVFIRTNLMNLYLMSGG----------EC------------------GVGCARL 177
G+ SN +R L+ + G C + AR
Sbjct: 136 RLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSLIAGYARRGDLKVARK 195
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
LF++MP R +VSWN ++ GYVK+G+++ A +FDE P ++VVSW MI+G G S+QA
Sbjct: 196 LFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCGLSKQA 255
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
L LFNEM RA V D+V L++ LSACA++GDL+ GK +H+ V E S+G+ L L NA
Sbjct: 256 LELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVME-ISMGKLSTL--LGNA 312
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------------- 343
LI MYA CG I+E+ VF + ++ +SW S+I G A G+ +E+L
Sbjct: 313 LIDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHGHGKESLSLFKMMQRTKICPN 372
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
+TF+GVL ACSH G +DEG ++F+ M+ + I+P I H GCMVD+ RAGL+ EA +
Sbjct: 373 EITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLKEAAKFI 432
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKR 462
+M ++PN + +LL C++H + ELA +KL + + + + Y+ L++N+YA+
Sbjct: 433 DSMKIEPNAIIWRTLLAACKVHGDVELAKVANEKLFS-MRKDHSGDYV-LMSNLYASRGE 490
Query: 463 WQDVAAVRQKMIKMGVRKPPGQSWVQ 488
W VR+ M GV K G S+V+
Sbjct: 491 WDGAEKVRKLMDDSGVTKIRGSSFVE 516
>gi|225450551|ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 500
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 170/486 (34%), Positives = 281/486 (57%), Gaps = 25/486 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGY--LINAHKVFEKTENPSTAIWNQMIRGHAR 95
++H+ +I +G Q+ L KL+ Y +S L +A +F+ +PST ++N M R +A
Sbjct: 6 RLHAHLITSGLHQQENHLRKLITLYTSSSSSSLHHARLLFDAIHHPSTYLYNTMFRVYAA 65
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
S TP ++ L++ M+ PD YT+ FLL C+ +G+++H + L G +VF+
Sbjct: 66 SPTPLHALLLHRHMLRHGPPPDTYTFPFLLKACSALAHLPKGQELHCQALKFGLGGHVFV 125
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
+L++LY G G+ AR +FD M R + SW +LL Y + A K+FDEMP
Sbjct: 126 ENSLIHLY---GSNSGMDSARRVFDGMGYRDIASWTTLLACYANSCSVKAARKVFDEMPE 182
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
R+V+S++ MI+ + + R+AL LF E+ ++ +++ L ACA +G L +G+W+
Sbjct: 183 RSVISYSAMIAAYVRGNRFREALDLFRELFSVKIEPSDSCVMSVLCACANLGALDVGRWV 242
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
+SYV ++ + V + ALI M+ CG IE A VF + ++ WT+M++G A
Sbjct: 243 YSYVCQSKG---DYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLSGLAM 299
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
G ++ + +TF+ +LS CSH G V+EG +F+ M ++G++P +E
Sbjct: 300 HGLGEQLIEAFEKMVDSGVKPNGVTFVALLSGCSHSGLVNEGLYYFDRMESDFGVEPTVE 359
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
H+GC+VDL RAGL+D+A L+ MP +PN A+ GSLL CR++ N E+ AQ L+ +
Sbjct: 360 HFGCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGSLLNACRVYKNVEIGELAAQWLIKD 419
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
+P A Y+ L++ +Y A RW +V V+ KM ++G RK PG S +++ G+ ++FV GD
Sbjct: 420 -EPWNGALYMTLLS-LYREAGRWDEVEKVKLKMKEVGCRKGPGCSLIEVGGICYEFVVGD 477
Query: 501 STYKQA 506
++ A
Sbjct: 478 KSHPCA 483
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 188/554 (33%), Positives = 301/554 (54%), Gaps = 70/554 (12%)
Query: 9 ANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYL 68
+NP S K+L +QI SLLQ + IH+Q+I NG SQ +++ +LL +
Sbjct: 22 SNP-KSLKSLDQKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAI 80
Query: 69 INAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVC 128
A ++F+ T NP+ ++ +I G S ++ LY +M+ PD Y + +L C
Sbjct: 81 DYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKAC 140
Query: 129 ARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVV 188
REG +VH R L G SN +R +M LY G+CG
Sbjct: 141 GSQLALREGREVHSRALKLGLSSNRLVRLRIMELY----GKCG----------------- 179
Query: 189 SWNSLLKGYVKRGDIDGAWKIFDEMPH----RNVVSWTTMISGCAQNGKSRQALSLFNEM 244
++ A ++F+EMP ++ V WT MI G +N + +AL F M
Sbjct: 180 -------------ELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFRGM 226
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLGKWIHSY-----VEENFSVGREPVLVSLNNALI 299
+ V ++ +V LSAC+++G L++G+W+HSY +E N VG NALI
Sbjct: 227 QGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVG---------NALI 277
Query: 300 HMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------L 344
+MY+ CG I+EA VF +M+ R+ +++ +MI+G + G +++A+ +
Sbjct: 278 NMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNV 337
Query: 345 TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQN 404
TF+GVL+ACSHGG VD G + F M +++G++P+IEHYGCMVDL R G ++EA+ L++
Sbjct: 338 TFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRT 397
Query: 405 MPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQ 464
M M P+ +LG+LL C++H N EL QVA+ V E + +G L+++VYA++ +W+
Sbjct: 398 MKMTPDHIMLGTLLSACKMHKNLELGEQVAK--VLEDRGQADSGTYVLLSHVYASSGKWK 455
Query: 465 DVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEG 524
+ A VR KM + G++K PG S +++N +H+F+ GD + + IY+ L E+ EG
Sbjct: 456 EAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYEKLEELNRLLRLEG 515
Query: 525 YKPDISELFLGIEE 538
Y P+ + IE+
Sbjct: 516 YHPEKEVVLQDIED 529
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 182/517 (35%), Positives = 289/517 (55%), Gaps = 27/517 (5%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H +I S +IL L+ FY +SG AH+VF WN MI A
Sbjct: 195 LHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGL 254
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
P+K++ L+++M K+ +P+ T +LS CA+ G + + +G+ ++ +
Sbjct: 255 PDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNA 314
Query: 159 LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
++++Y+ +CG + A+ LF+ M + +VSW ++L G+ K G+ D A IFD MPH+
Sbjct: 315 MLDMYV----KCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKW 370
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRAR-VGLDQVALVAALSACAEIGDLKLGKWIH 276
+W +IS QNGK R ALSLF+EM+ ++ D+V L+ AL A A++G + G WIH
Sbjct: 371 TAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIH 430
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
Y++++ + L +L+ MYA CG + +A VF ++R++ W++MI A
Sbjct: 431 VYIKKH----DINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMY 486
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G + AL +TF +L AC+H G V+EG Q FE M +GI P+I+H
Sbjct: 487 GQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQH 546
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
Y C+VD+F RAGL+++A S ++ MP+ P AV G+LL C H N ELA Q L+ E+
Sbjct: 547 YVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLL-EL 605
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+P G L++N+YA A W+ V+ +R+ M V+K P S + +NG++H+F+ GD+
Sbjct: 606 EPCN-HGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDN 664
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++ + IY L EI+ + GYKPD+S L EE
Sbjct: 665 SHPFSQKIYSKLDEISEKFKPIGYKPDMSNLLQLSEE 701
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 160/330 (48%), Gaps = 41/330 (12%)
Query: 20 TRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY--LINAHKVFEK 77
+ I + T L QIH+ ++ Y +KLL Y S LI A VF +
Sbjct: 72 STNILEFIDQCTNTMQLKQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQ 131
Query: 78 TENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETE-PDEYTYSFLLSVCARCGLFRE 136
P+ WN +IRG+A S P +S ++ M+ +E P+++T+ FL +R +
Sbjct: 132 IPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHL 191
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKG 196
G +HG V+ + S++FI +L+N Y SG A +F +MP + VVSWN+++
Sbjct: 192 GSVLHGMVIKASLSSDLFILNSLINFYGSSGAP---DLAHRVFTNMPGKDVVSWNAMINA 248
Query: 197 YVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVAL 256
+ G D A +F EM EM+ + + + +
Sbjct: 249 FALGGLPDKALLLFQEM-----------------------------EMKDVKPNV--ITM 277
Query: 257 VAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFR 316
V+ LSACA+ DL+ G+WI SY+E N G L+ LNNA++ MY CG I +A +F
Sbjct: 278 VSVLSACAKKIDLEFGRWICSYIENN---GFTEHLI-LNNAMLDMYVKCGCINDAKDLFN 333
Query: 317 KMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
KM ++ VSWT+M+ G AK G EA F
Sbjct: 334 KMSEKDIVSWTTMLDGHAKLGNYDEAHCIF 363
>gi|449467271|ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
gi|449530724|ref|XP_004172343.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
Length = 543
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 188/539 (34%), Positives = 313/539 (58%), Gaps = 29/539 (5%)
Query: 10 NPATSSKALTTRQIF-SLLQIRNTT-KTLFQIHSQIIINGFSQKNYILAKLLAFYVTS-G 66
+P ++SK + + Q + S++ TT + L Q H+ +I +G + +++ +++LAF + G
Sbjct: 12 SPISTSKLIISNQPYLSMVDKYCTTMRDLQQFHAHLIKSGQAIESFAASRILAFCASPLG 71
Query: 67 YLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQM-IDKETEPDEYTYSFLL 125
+ A+ VF + +NP+ WN +IRG ++S P+ ++YL+ M + + EP TY +
Sbjct: 72 NMDYAYLVFLQMQNPNLFSWNTVIRGFSQSSNPQIALYLFIDMLVSSQVEPQRLTYPSIF 131
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPAR 185
++ GL +G Q+HGR++ G + FIR ++ +Y G + AR +F+
Sbjct: 132 KAYSQLGLAHDGAQLHGRIIKLGLQFDPFIRNTILYMYATGGF---LSEARRIFNQEMEF 188
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
VVSWNS++ G K G+ID + K+FD+MP +N +SW +MI G +NG ++AL LF +M+
Sbjct: 189 DVVSWNSMILGLAKCGEIDESRKLFDKMPVKNPISWNSMIGGYVRNGMFKEALKLFIKMQ 248
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC 305
R+ + +V+ L+A A+IG L+ G WIH Y+++N ++ ++V+ A+I MY C
Sbjct: 249 EERIQPSEFTMVSLLNASAQIGALRQGVWIHEYIKKN-NLQLNAIVVT---AIIDMYCKC 304
Query: 306 GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALL---------------TFLGVL 350
G I A VF K+ R+ SW SMI G A G +EA+L +F+ VL
Sbjct: 305 GSIGNALQVFEKIPCRSLSSWNSMIFGLAVNGCEKEAILVFKMLESSSLKPDCISFMAVL 364
Query: 351 SACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPN 410
+AC+HG VDEG +FF M + I+P I+HY MVD+ SRAG ++EA ++ MP++ +
Sbjct: 365 TACNHGAMVDEGMEFFSRMKNTYRIEPSIKHYNLMVDMISRAGFLEEAEQFIKTMPIEKD 424
Query: 411 DAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVR 470
+ G LL CRI+ N E+A + A+K V E+DPE+ GY+ L+AN++A + R
Sbjct: 425 AIIWGCLLSACRIYGNTEMAKRAAEK-VNELDPEETMGYV-LMANIHAWGNNFVGAMEKR 482
Query: 471 QKMIKMGVRKPPGQSWVQINGVLHDFVAGDS-TYKQASLIYKTLGEITMQAMQEGYKPD 528
M V K PG S+++++ +H+F+AG +++A IY LG++ + +G D
Sbjct: 483 VAMRMKKVEKEPGGSFIEVDEEVHEFIAGGGRLHRKAQEIYIVLGQLGVMLQDKGAVGD 541
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 194/589 (32%), Positives = 294/589 (49%), Gaps = 81/589 (13%)
Query: 22 QIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENP 81
SLL+ T L ++ +QII +GF Y+ ++ +V + +A +F+ +P
Sbjct: 69 HFISLLRSCKTVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDP 128
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVH 141
+WN + RG+ + + V+L+ +M + P+ +T+ +L CA+ G F EGE++H
Sbjct: 129 KVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIH 188
Query: 142 ------------------------GRVLASGY-----------------------CSNVF 154
GR + S Y C+ V
Sbjct: 189 CEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVA 248
Query: 155 IRTNLMNLY---------LMSGGECGVG---CARLLFDDMPARSVVSWNSLLKGYVKRGD 202
+ L +L +M G +G AR LFD MP R +SWN++L GY GD
Sbjct: 249 LARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGD 308
Query: 203 IDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR-RARVGLDQVALVAALS 261
++ ++F+EMP RNV SW +I G A NG + L F M V + LV LS
Sbjct: 309 VEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLS 368
Query: 262 ACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR 321
ACA +G L LGKW+H Y ++G + + + NALI MY+ CG IE A VF M +
Sbjct: 369 ACARLGALDLGKWVHVYAA---TIGFKGS-IYVGNALIDMYSKCGLIENAMEVFESMDLK 424
Query: 322 NTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFF 366
+ ++W SMI G A G +AL +TF+GVL +C+H G V+EG +F
Sbjct: 425 DLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYF 484
Query: 367 ECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNN 426
M + I P+IEHYGCMVDLF RAGL+D A V+ MPM+ + + +LL CRI+ N
Sbjct: 485 NSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKN 544
Query: 427 AELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSW 486
+LA QKL+ ++P+ A Y+ L++N+Y RW+DVA ++ M G +K PG S
Sbjct: 545 IDLAELALQKLIV-LEPKNPANYV-LLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSL 602
Query: 487 VQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLG 535
+++N + +F + D + Q+ IY L + GY+P++ EL G
Sbjct: 603 IEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPNMMELLQG 651
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 55/137 (40%), Gaps = 6/137 (4%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
ML++ ++ N AT L+ L + +H GF Y+ L+
Sbjct: 350 MLIDGLVVPNDATLVTVLSACARLGALDLGK------WVHVYAATIGFKGSIYVGNALID 403
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y G + NA +VFE + WN MI G A ++ L+ QM +PD T
Sbjct: 404 MYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGIT 463
Query: 121 YSFLLSVCARCGLFREG 137
+ +L C GL EG
Sbjct: 464 FIGVLCSCTHLGLVEEG 480
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 179/524 (34%), Positives = 292/524 (55%), Gaps = 30/524 (5%)
Query: 27 LQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIW 86
LQ RN + ++ GF +++ + F + A K+F+ + W
Sbjct: 133 LQERNYGNAVL---GNVLSLGFHADVFVVNAAMHFLAVCSSMAEARKLFDGSHVRDLVSW 189
Query: 87 NQMIRGHARSETPEKSVYLYKQMI-DKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVL 145
N +I G+ R P +++ ++ +M+ D PDE T ++S A+ G ++HG V
Sbjct: 190 NTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYVE 249
Query: 146 ASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDID 204
+ G V + +M++Y+ +CG + A+ +F+ + +++VSW +++ GY + G +D
Sbjct: 250 SHGVRCTVRLMNVVMDMYI----KCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQFGLMD 305
Query: 205 GAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACA 264
A K+FDEMP R+V W +++G Q + ++AL LF++M+ A V D + +V LSAC+
Sbjct: 306 DARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACS 365
Query: 265 EIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTV 324
++G L++G W+H Y++ R + V L L+ MY+ CG IE+A VF+++ +N +
Sbjct: 366 QLGALEMGMWVHHYIDRR----RVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPEKNAL 421
Query: 325 SWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECM 369
+WT+MI+G A G+A A+ +TF+GVLSAC H G V EG++FF M
Sbjct: 422 TWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGLVKEGQEFFSLM 481
Query: 370 NQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAEL 429
+ ++ +++HY CMVDL RAG +DEA LV MPM+P+ V G+L CR+H N L
Sbjct: 482 VSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGALFFACRMHGNITL 541
Query: 430 ASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQI 489
+ A KLV E+DP + Y+ L+AN+YA A + VR M +GV K PG S +++
Sbjct: 542 GEKAAMKLV-ELDPGDSGIYV-LLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIEL 599
Query: 490 NGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELF 533
NGV+H+F+ D ++ + IY L EIT+Q D S L
Sbjct: 600 NGVVHEFIVKDKSHTDIAAIYDCLHEITLQIEHTANMIDTSMLL 643
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 170/385 (44%), Gaps = 88/385 (22%)
Query: 101 KSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLM 160
+ + LY ++ + PD T+ FLL CAR G V G VL+ G+ ++VF+ M
Sbjct: 104 RCLPLYCSLL-RSARPDHLTFPFLLKACARLQERNYGNAVLGNVLSLGFHADVFVVNAAM 162
Query: 161 NLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVS 220
+ + + AR LFD R +VSWN+L+ GYV+R
Sbjct: 163 HFLAVCS---SMAEARKLFDGSHVRDLVSWNTLIGGYVRR-------------------- 199
Query: 221 WTTMISGCAQNGKSRQALSLFNEMR-RARVGLDQVALVAALSACAEIGDLKLGKWIHSYV 279
G R+AL +F M V D+V ++ +S A++ DL+LG+ +H YV
Sbjct: 200 -----------GVPREALEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYV 248
Query: 280 EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK---- 335
E + V L N ++ MY CG++E A VF + ++ VSWT+MI G+A+
Sbjct: 249 ESHGV----RCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQFGLM 304
Query: 336 ----------------------QGYAQ-----EAL---------------LTFLGVLSAC 353
GY Q EAL +T + +LSAC
Sbjct: 305 DDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSAC 364
Query: 354 SHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAV 413
S G ++ G +++ + + +VD++S+ G +++A + + +P K N
Sbjct: 365 SQLGALEMGMWVHHYIDRRR-VSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPEK-NALT 422
Query: 414 LGSLLLGCRIHNNAELASQVAQKLV 438
+++ G H +A++A + Q+++
Sbjct: 423 WTAMISGLANHGHADVAIKYFQRMI 447
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 184/548 (33%), Positives = 293/548 (53%), Gaps = 76/548 (13%)
Query: 24 FSLLQIRNTTKTLFQIHSQIIING-----FSQKNYILAKLLAFYVTSGYLINAHKVFEKT 78
SL+ + TK L QIH+Q++ G FS I A L+ + + Y A +VF++
Sbjct: 39 LSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDY---AQQVFDQI 95
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETE-PDEYTYSFLLSVCARCGLFREG 137
+P+ WN +IR +A S P +S+ ++ +M+ + + PD++T+ FL+ + G
Sbjct: 96 PHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTG 155
Query: 138 EQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGY 197
+ HG V+ S+VFI NSL+ Y
Sbjct: 156 KAFHGMVIKVLLGSDVFI----------------------------------LNSLIHFY 181
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
K G++ +++F P R+VVSW +MI+ Q G +AL LF EM V + + +V
Sbjct: 182 AKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMV 241
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
LSACA+ D + G+W+HSY+E N R ++L+NA++ MY CG +E+A +F K
Sbjct: 242 GVLSACAKKSDFEFGRWVHSYIERN----RIXESLTLSNAMLDMYTKCGSVEDAKRLFDK 297
Query: 318 MQRRNTVSWTSMITGFAK------------QGYAQEAL---------------LTFLGVL 350
M ++ VSWT+M+ G+AK G+ ++A+ +TF +L
Sbjct: 298 MPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNIL 357
Query: 351 SACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPN 410
ACSH G V+EGR FF M +G+ P ++HY CMVD+ RAGL++EA L++ MPM P
Sbjct: 358 CACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPA 417
Query: 411 DAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVR 470
+V G+LL C IH N LA Q +L+ E++P Y+ L++N+YA A +W V+ +R
Sbjct: 418 ASVWGALLGACTIHENVVLAEQACSQLI-ELEPGNHGAYV-LLSNIYAKAGKWDRVSGLR 475
Query: 471 QKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
+ M +G++K PG S ++++G++H+F+ GD+++ A IY L EI + GY P+ S
Sbjct: 476 KLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKS 535
Query: 531 ELFLGIEE 538
L +EE
Sbjct: 536 HLLQLVEE 543
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 194/573 (33%), Positives = 298/573 (52%), Gaps = 62/573 (10%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVF 75
+ SLL + L QIH I G +Y KL+ S L A ++
Sbjct: 3 IAIHHCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLL 62
Query: 76 EKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKE-TEPDEYTYSFLLSVCARCGLF 134
P ++N ++RG++ S+ P SV ++ +M+ K PD ++++F++
Sbjct: 63 LCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSL 122
Query: 135 REGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG----------------------- 171
R G Q+H + L G S++F+ T L+ +Y G CG
Sbjct: 123 RTGFQMHCQALKHGLESHLFVGTTLIGMY----GGCGCVEFARKVFDEMHQPNLVAWNAV 178
Query: 172 ---------VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWT 222
V AR +FD M R+ SWN +L GY+K G+++ A +IF EMPHR+ VSW+
Sbjct: 179 ITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWS 238
Query: 223 TMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEEN 282
TMI G A NG ++ F E++RA + ++V+L LSAC++ G + GK +H +VE+
Sbjct: 239 TMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEK- 297
Query: 283 FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQGYAQE 341
+VS+NNALI MY+ CG + A VF MQ +R VSWTSMI G A G +E
Sbjct: 298 ---AGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEE 354
Query: 342 AL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMV 386
A+ ++F+ +L ACSH G ++EG +F M + + I+P IEHYGCMV
Sbjct: 355 AVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMV 414
Query: 387 DLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQA 446
DL+ R+G + +A+ + MP+ P V +LL C H N ELA QV Q+L E+DP
Sbjct: 415 DLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRL-NELDPNN- 472
Query: 447 AGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQA 506
+G L L++N YA A +W+DVA++R+ MI ++K S V++ ++ F AG+
Sbjct: 473 SGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGID 532
Query: 507 SLIYKTLGEITMQAMQE-GYKPDISELFLGIEE 538
++ L EI ++ E GY P+++ +EE
Sbjct: 533 IEAHEKLKEIILRLKDEAGYTPEVASALYDVEE 565
>gi|326528029|dbj|BAJ89066.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 639
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 195/600 (32%), Positives = 306/600 (51%), Gaps = 88/600 (14%)
Query: 12 ATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINA 71
A S + L + + SL + ++H+Q++ +G +KL++ Y L +
Sbjct: 50 APSQRRLVEQHLASLPHGLQHLHHVQELHAQLLKHGLHLDPLAASKLISSYALQRRLPAS 109
Query: 72 HKVFEKTENP--STAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
++F NP +T + N ++R +A + P +V L+ M + D +TYSFL+ +
Sbjct: 110 RRIFASFPNPQATTFLPNTLLRAYALNALPHAAVSLFSAMPQR----DSFTYSFLIKALS 165
Query: 130 RCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGG--------------------- 168
GL VH V+ G + ++ L++ Y +GG
Sbjct: 166 SSGL-TPLRAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFLDASKVFEEMPRRDTVSWNS 224
Query: 169 -------ECGVGCARLLFDDMPARSVVSWNSLLKGYVK---------------------- 199
+ V AR +FD+MP + VSWN++L GY K
Sbjct: 225 AMAAMVRQGEVASARRMFDEMPDKDTVSWNTVLDGYTKAGKMEDAFELFQCMPERNVVSW 284
Query: 200 ---------RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG 250
+GDI+ A IFD+MP +N+V+WT M+S CAQNG +A LF +M+ A V
Sbjct: 285 STVVSGYCKKGDIEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGRLFTQMKEAAVE 344
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEE 310
LD A+V+ L+ACAE G L LGK IH YV +GR + NA+I M+ CG +
Sbjct: 345 LDVAAVVSILAACAESGSLALGKRIHRYVRTR-QLGRS---THVCNAMIDMFCKCGCVNR 400
Query: 311 AYGVF-RKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACS 354
A VF ++ +++VSW ++I GFA G+ +AL +T + VLSAC+
Sbjct: 401 ADYVFDTEIAEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFRPDAVTMINVLSACT 460
Query: 355 HGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL 414
H GFV+EGRQ F M +++GI P+IEHYGCM+DL R GL++EA L+++MP PN+ +
Sbjct: 461 HMGFVEEGRQHFSNMERDYGIVPQIEHYGCMIDLLGRGGLIEEAVGLIKSMPWDPNEVIW 520
Query: 415 GSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMI 474
GSLL CR+H N E A ++A ++++ P A Y A+++N+YA A +W D+A R +M
Sbjct: 521 GSLLSACRLHKNVEYA-EIAVNELSKLQPSNAGNY-AVLSNIYAEAGQWSDMAKARMQMK 578
Query: 475 KMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFL 534
G +K G SW++++ H+F GD + + I + + ++ G P EL +
Sbjct: 579 GTGSQKSAGSSWIELDEAFHEFTVGDRKHSDSDQISEMVDRLSSHVKDVGCVPTAHELLV 638
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 194/589 (32%), Positives = 293/589 (49%), Gaps = 81/589 (13%)
Query: 22 QIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENP 81
SLL+ T L ++ +QII +GF Y+ ++ +V + +A +F+ +P
Sbjct: 27 HFISLLRSCKTVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDP 86
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVH 141
+WN + RG+ + + V+L+ +M + P+ +T+ +L CA+ G F EGE++H
Sbjct: 87 KVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIH 146
Query: 142 ------------------------GRVLASGY-----------------------CSNVF 154
GR + S Y C+ V
Sbjct: 147 CEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVA 206
Query: 155 IRTNLMNLY---------LMSGGECGVG---CARLLFDDMPARSVVSWNSLLKGYVKRGD 202
+ L +L +M G +G AR LFD MP R +SWN++L GY GD
Sbjct: 207 LARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGD 266
Query: 203 IDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR-RARVGLDQVALVAALS 261
++ ++F+EMP RNV SW +I G A NG + L F M V + LV LS
Sbjct: 267 VEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLS 326
Query: 262 ACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR 321
ACA +G L LGKW+H Y ++G + + + NALI MY+ CG IE A VF M +
Sbjct: 327 ACARLGALDLGKWVHVYAA---TIGFKGS-IYVGNALIDMYSKCGLIENAMEVFESMDLK 382
Query: 322 NTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFF 366
+ ++W SMI G A G +AL +TF+GVL +C+H G V+EG +F
Sbjct: 383 DLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYF 442
Query: 367 ECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNN 426
M + I P+IEHYGCMVDLF RAGL+D A V+ MPM+ + + +LL CRI+ N
Sbjct: 443 NSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKN 502
Query: 427 AELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSW 486
+LA QKL+ ++P+ A Y+ L++N+Y RW+DVA ++ M G +K PG S
Sbjct: 503 IDLAELALQKLIV-LEPKNPANYV-LLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSL 560
Query: 487 VQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLG 535
+++N + +F + D + Q+ IY L + GY P++ EL G
Sbjct: 561 IEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYGPNMMELLQG 609
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 55/137 (40%), Gaps = 6/137 (4%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
ML++ ++ N AT L+ L + +H GF Y+ L+
Sbjct: 308 MLIDGLVVPNDATLVTVLSACARLGALDLGK------WVHVYAATIGFKGSIYVGNALID 361
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y G + NA +VFE + WN MI G A ++ L+ QM +PD T
Sbjct: 362 MYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGIT 421
Query: 121 YSFLLSVCARCGLFREG 137
+ +L C GL EG
Sbjct: 422 FIGVLCSCTHLGLVEEG 438
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 187/520 (35%), Positives = 295/520 (56%), Gaps = 50/520 (9%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
LL+ YV +G + +A ++F+ + WN ++ G+ R + + + L+ +M + D
Sbjct: 190 LLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVR----D 245
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRV----------LASGYCSNVFI-----------R 156
+ +++ +++ A+ GL E ++ + + SG+ N +
Sbjct: 246 KISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPE 305
Query: 157 TNLMNLYLMSGGECG---VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
N ++ M G + AR LFD MP+R+ SWN+++ GY + G+ID A +FDEM
Sbjct: 306 KNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEM 365
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK 273
P R+ +SW MISG AQ+G+S +AL LF +M+R L++ AL ALS+CAEI L+LGK
Sbjct: 366 PQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGK 425
Query: 274 WIHS-YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
+H V+ F G NAL+ MY CG IEEA+ VF + ++ VSW +MI G
Sbjct: 426 QLHGRLVKAGFQTG-----YIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAG 480
Query: 333 FAKQGYAQEAL--------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
+A+ G+ +EAL +T +GVLSACSH G VD+G ++F M QN+GI
Sbjct: 481 YARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITAN 540
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
+HY CM+DL RAG +DEA +L+++MP P+ A G+LL RIH + EL + A+K V
Sbjct: 541 AKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEK-V 599
Query: 439 AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVA 498
E++P+ + Y+ L++N+YAA+ RW++V +R KM GV+K PG SWV+I H F
Sbjct: 600 FEMEPDNSGMYV-LLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTV 658
Query: 499 GDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
GD ++ +A IY L E+ ++ ++G+ + +EE
Sbjct: 659 GDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEE 698
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 198/453 (43%), Gaps = 94/453 (20%)
Query: 44 IINGFSQKNYILAKLLAFYVTSGYLIN-----AHKVFEKTENPSTAIWNQMIRGHARSET 98
+ NG +++ + + SGYL N A KVFEK + WN M+ G+ ++
Sbjct: 82 VFNGMRRRSTVTYNAM----ISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGN 137
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
+ L+ QM E D +++ +LS A+ G E ++ ++L N
Sbjct: 138 LSAARALFNQM----PEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLV----KNEISWNG 189
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
L++ Y+ +G + AR LFD +VSWN L+ GYV++ +D A +FD MP R+
Sbjct: 190 LLSAYVQNG---RIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDK 246
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
+SW MI+G AQNG +A LF E+ D A A +S + G L I
Sbjct: 247 ISWNIMITGYAQNGLLSEARRLFEELPIR----DVFAWTAMVSGFVQNGMLDEATRIFEE 302
Query: 279 VEENFSVGREPVL-----------------------VSLNNALIHMYASCGEIEEAYGVF 315
+ E V ++ S N ++ YA CG I++A +F
Sbjct: 303 MPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILF 362
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGV---------------LSACS------ 354
+M +R+ +SW +MI+G+A+ G ++EAL F+ + LS+C+
Sbjct: 363 DEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALE 422
Query: 355 -----HGGFVDEGRQ------------FFEC--MNQNWGI-----KPRIEHYGCMVDLFS 390
HG V G Q + +C + + + + + I + M+ ++
Sbjct: 423 LGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYA 482
Query: 391 RAGLMDEAFSLVQNMPM--KPNDAVLGSLLLGC 421
R G EA +L ++M M KP+D L +L C
Sbjct: 483 RHGFGKEALALFESMKMTIKPDDVTLVGVLSAC 515
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 151/362 (41%), Gaps = 72/362 (19%)
Query: 59 LAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDE 118
++ Y+ G +A VF ST +N MI G+ + + + ++++M D++
Sbjct: 67 ISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDL---- 122
Query: 119 YTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLL 178
+ V+ SGY N + AR L
Sbjct: 123 ---------------------ISWNVMLSGYVKN-----------------GNLSAARAL 144
Query: 179 FDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQAL 238
F+ MP + VVSWN++L G+ + G ++ A KIFD+M +N +SW ++S QNG+ A
Sbjct: 145 FNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDAR 204
Query: 239 SLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN-NA 297
LF+ +++ + V+ + L + + R PV ++ N
Sbjct: 205 RLFD----SKMDWEIVSWNCLMGGYVRKKRLDDARSLFD---------RMPVRDKISWNI 251
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFL---------- 347
+I YA G + EA +F ++ R+ +WT+M++GF + G EA F
Sbjct: 252 MITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSW 311
Query: 348 -GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP 406
+++ +++ R+ F+ M + MV +++ G +D+A L MP
Sbjct: 312 NAMIAGYVQSQQIEKARELFDQMPSR-----NTSSWNTMVTGYAQCGNIDQAKILFDEMP 366
Query: 407 MK 408
+
Sbjct: 367 QR 368
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 112/233 (48%), Gaps = 28/233 (12%)
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
+V WN + Y+++G + A +F+ M R+ V++ MISG N K A +F +M
Sbjct: 60 IVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM-- 117
Query: 247 ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCG 306
D ++ LS + G+L + + F+ E +VS NA++ +A G
Sbjct: 118 --PDRDLISWNVMLSGYVKNGNLSAARAL-------FNQMPEKDVVSW-NAMLSGFAQNG 167
Query: 307 EIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLS------ACSHGGFV- 359
+EEA +F +M +N +SW +++ + + G ++A F + C GG+V
Sbjct: 168 FVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVR 227
Query: 360 ----DEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
D+ R F+ M ++ +I + M+ +++ GL+ EA L + +P++
Sbjct: 228 KKRLDDARSLFDRM----PVRDKIS-WNIMITGYAQNGLLSEARRLFEELPIR 275
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 119/249 (47%), Gaps = 33/249 (13%)
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
++V W IS + G+ ALS+FN MRR R + A+++ G L K+
Sbjct: 59 DIVKWNRKISAYMRKGQCESALSVFNGMRR-RSTVTYNAMIS--------GYLSNNKF-- 107
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+ F + L+S N ++ Y G + A +F +M ++ VSW +M++GFA+
Sbjct: 108 DCARKVFEKMPDRDLISW-NVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQN 166
Query: 337 GYAQEAL-----------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCM 385
G+ +EA +++ G+LSA G +++ R+ F+ +W I + C+
Sbjct: 167 GFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDS-KMDW----EIVSWNCL 221
Query: 386 VDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQ 445
+ + R +D+A SL MP++ D + ++++ N L S+ A++L E+
Sbjct: 222 MGGYVRKKRLDDARSLFDRMPVR--DKISWNIMITGYAQNG--LLSE-ARRLFEELPIRD 276
Query: 446 AAGYLALVA 454
+ A+V+
Sbjct: 277 VFAWTAMVS 285
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 13/215 (6%)
Query: 38 QIHSQIIINGFSQKNYILAK-LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
Q+H +++ GF Q YI LLA Y G + A VFE WN MI G+AR
Sbjct: 426 QLHGRLVKAGF-QTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARH 484
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLAS-GYCSNVFI 155
++++ L++ M +PD+ T +LS C+ GL +G + + + G +N
Sbjct: 485 GFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKH 543
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMP-ARSVVSWNSLLKGYVKRGDID----GAWKIF 210
T +++L +G + A L MP +W +LL GD + A K+F
Sbjct: 544 YTCMIDLLGRAG---RLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVF 600
Query: 211 DEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
EM N + + + A +G+ R+ + ++MR
Sbjct: 601 -EMEPDNSGMYVLLSNLYAASGRWREVREMRSKMR 634
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 178/541 (32%), Positives = 289/541 (53%), Gaps = 59/541 (10%)
Query: 11 PATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV---TSGY 67
P T++ + I SL+ + + L QI + I +L KL+ F T
Sbjct: 26 PNTAALEPPSSSILSLIPKCTSLRELKQIQAYTI-KTHQNNPTVLTKLINFCTSNPTIAS 84
Query: 68 LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSV 127
+ +AH++F+K P ++N M RG+AR + P +++ L Q++ PD+YT+S LL
Sbjct: 85 MDHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKA 144
Query: 128 CARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSV 187
CAR EG+Q+H + G N+++ L+N+Y C
Sbjct: 145 CARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMY--------TAC------------- 183
Query: 188 VSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRA 247
D+D A ++FD++ VV++ +I+ CA+N + +AL+LF E++ +
Sbjct: 184 -------------NDVDAARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQES 230
Query: 248 RVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGE 307
+ V ++ ALS+CA +G L LG+WIH YV++N G + V +N ALI MYA CG
Sbjct: 231 GLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKN---GFDQ-YVKVNTALIDMYAKCGS 286
Query: 308 IEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSA 352
+++A VF+ M RR+T +W++MI +A G+ +A+ +TFLG+L A
Sbjct: 287 LDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYA 346
Query: 353 CSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDA 412
CSH G V+EG ++F M +GI P I+HYGCM+DL RAG ++EA + +P+KP
Sbjct: 347 CSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPI 406
Query: 413 VLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQK 472
+ +LL C H N E+A V Q++ E+D Y+ L +N+ A RW DV +R+
Sbjct: 407 LWRTLLSSCSSHGNVEMAKLVIQRIF-ELDDSHGGDYVIL-SNLCARNGRWDDVNHLRKM 464
Query: 473 MIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISEL 532
M+ G K PG S +++N V+H+F +GD + +++++ L E+ + GY PD S +
Sbjct: 465 MVDKGALKVPGCSSIEVNNVVHEFFSGDGVHSTSTILHHALDELVKELKLAGYVPDTSLV 524
Query: 533 F 533
F
Sbjct: 525 F 525
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 188/555 (33%), Positives = 307/555 (55%), Gaps = 72/555 (12%)
Query: 9 ANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYL 68
+NP S K+L +QI SLLQ + IH+Q+I NG SQ +++ +LL +
Sbjct: 29 SNP-KSLKSLDQKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAI 87
Query: 69 INAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVC 128
A ++F+ T NP+ ++ +I G S +++ LY +M+ + PD Y + +L C
Sbjct: 88 DYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKAC 147
Query: 129 ARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMP---- 183
REG +VH R L G+ SN +R +M LY G+CG +G AR +F++MP
Sbjct: 148 GSQLALREGREVHSRALKLGFSSNRLVRLRIMELY----GKCGELGDARRVFEEMPEDVV 203
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
A+ V W +++ G+V+ N ++ +AL F
Sbjct: 204 AKDTVCWTAMIDGFVR-------------------------------NEETNRALEAFRG 232
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY-----VEENFSVGREPVLVSLNNAL 298
M+ V ++ +V LSAC+++G L++G+W+HSY +E N VG NAL
Sbjct: 233 MQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVG---------NAL 283
Query: 299 IHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------------- 343
I+MY+ CG I+EA VF +M+ R+ +++ +MI+G + G +++A+
Sbjct: 284 INMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTN 343
Query: 344 LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQ 403
+TF+GVL+ACSHGG VD G + F M +++ ++P+IEHYGCMVDL R G ++EA+ L++
Sbjct: 344 VTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIR 403
Query: 404 NMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRW 463
M M P+ +LG+LL C++H N EL QVA++L E + +G L+++VYA++ +W
Sbjct: 404 TMKMTPDHIMLGTLLSACKMHKNLELGEQVAKEL--EDRGQADSGTYVLLSHVYASSGKW 461
Query: 464 QDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQE 523
++ A VR KM + G++K PG S +++N +H+F+ GD + Q IY+ L E+ E
Sbjct: 462 KEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKLEELNRLLRLE 521
Query: 524 GYKPDISELFLGIEE 538
GY P+ + IE+
Sbjct: 522 GYHPEKEVVLQDIED 536
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 184/515 (35%), Positives = 288/515 (55%), Gaps = 28/515 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H+ + + +S Y+ + L+ Y G + A +VF + WN +I + ++
Sbjct: 168 QVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNG 227
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ ++ +M+D EPDE T + ++S CA +EG Q+H RV+ + + +
Sbjct: 228 PASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLG 287
Query: 158 N-LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
N L+++Y +C V AR +FD M R+VVS S++ GY + + A +F +M
Sbjct: 288 NALVDMY----AKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQ 343
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
RNVVSW +I+G QNG++ +AL LF ++R + LSACA + DL LG+
Sbjct: 344 RNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQA 403
Query: 276 HSYVEEN---FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
H++V + F G E + + N+LI MY CG IE+ VF KM+ R+ VSW ++I G
Sbjct: 404 HTHVLKQGFEFQSGAESDIF-VGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVG 462
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
+A+ GY EAL +T +GVL ACSH G V+EGR +F M ++ G+ P
Sbjct: 463 YAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEH-GLIP 521
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
+HY CMVDL RAG ++EA +L++ MP+ P+ V GSLL C++H N E+ A+KL
Sbjct: 522 LKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKL 581
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
+ EIDP + Y+ L++N+YA RW DV VR+ M + GV K PG SW+++ +H F+
Sbjct: 582 L-EIDPWNSGPYV-LLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFL 639
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQEGYKPDISEL 532
D ++ IY L +T Q + GY PD ++
Sbjct: 640 VKDKSHPHRKQIYSVLKMLTEQMKRVGYIPDANDF 674
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 158/309 (51%), Gaps = 24/309 (7%)
Query: 116 PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGC 174
P+ ++ LL C R R VH R+L + + +FI+ L+++Y G+C +
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVY----GKCDCLDD 68
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
AR LFD MP R+ +WNSL+ K G +D A ++F MP + SW +M+SG AQ+ +
Sbjct: 69 ARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRF 128
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
++L F +M R L++ + +ALSACA + DL +G +H+ V S R V +
Sbjct: 129 EESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALV----SKSRYSTDVYM 184
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------- 343
+ALI MY+ CG + A VF M RN V+W S+IT + + G A EAL
Sbjct: 185 GSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGL 244
Query: 344 ----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAF 399
+T V+SAC+ + EG Q + + + + +VD++++ ++EA
Sbjct: 245 EPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEAR 304
Query: 400 SLVQNMPMK 408
+ M ++
Sbjct: 305 RVFDRMSIR 313
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 148/305 (48%), Gaps = 40/305 (13%)
Query: 44 IINGFSQKN-YILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKS 102
+ + Q+N + L++ SG+L A ++F P WN M+ G A+ + E+S
Sbjct: 72 LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131
Query: 103 VYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNL 162
+ + +M ++ +EY++ LS CA G QVH V S Y ++V++ + L+++
Sbjct: 132 LEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDM 191
Query: 163 YLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSW 221
Y +CG V CA +F M R++V+WNSL+ Y
Sbjct: 192 Y----SKCGSVACAEEVFSGMIERNLVTWNSLITCY------------------------ 223
Query: 222 TTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE 281
QNG + +AL +F M + + D+V L + +SACA + LK G IH+ V +
Sbjct: 224 -------EQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVK 276
Query: 282 NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQE 341
+ V L NAL+ MYA C ++ EA VF +M RN VS TSM++G+A+ +
Sbjct: 277 TNKFRDDLV---LGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKA 333
Query: 342 ALLTF 346
A F
Sbjct: 334 ARFMF 338
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 194/567 (34%), Positives = 297/567 (52%), Gaps = 62/567 (10%)
Query: 24 FSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKTENP 81
SLL + L QIH I G +Y KL+ S L A ++ P
Sbjct: 1 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEP 60
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKE-TEPDEYTYSFLLSVCARCGLFREGEQV 140
++N ++RG++ S+ P SV ++ +M+ K PD ++++F++ R G Q+
Sbjct: 61 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 120
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECG----------------------------- 171
H + L G S++F+ T L+ +Y G CG
Sbjct: 121 HCQALKHGLESHLFVGTTLIGMY----GGCGCVEFARKVFDEMHQPNLVAWNAVITACFR 176
Query: 172 ---VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGC 228
V AR +FD M R+ SWN +L GY+K G+++ A +IF EMPHR+ VSW+TMI G
Sbjct: 177 GNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGI 236
Query: 229 AQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGRE 288
A NG ++ F E++RA + ++V+L LSAC++ G + GK +H +VE+
Sbjct: 237 AHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEK----AGY 292
Query: 289 PVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQGYAQEAL---- 343
+VS+NNALI MY+ CG + A VF MQ +R VSWTSMI G A G +EA+
Sbjct: 293 SWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFN 352
Query: 344 -----------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRA 392
++F+ +L ACSH G ++EG +F M + + I+P IEHYGCMVDL+ R+
Sbjct: 353 EMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRS 412
Query: 393 GLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLAL 452
G + +A+ + MP+ P V +LL C H N ELA QV Q+L E+DP +G L L
Sbjct: 413 GKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRL-NELDPNN-SGDLVL 470
Query: 453 VANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKT 512
++N YA A +W+DVA++R+ MI ++K S V++ ++ F AG+ ++
Sbjct: 471 LSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEK 530
Query: 513 LGEITMQAMQE-GYKPDISELFLGIEE 538
L EI ++ E GY P+++ +EE
Sbjct: 531 LKEIILRLKDEAGYTPEVASALYDVEE 557
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 181/496 (36%), Positives = 279/496 (56%), Gaps = 30/496 (6%)
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
YV G + A VFE+ + +WN MI G+ S ++ L+++M+ + DE+T+
Sbjct: 238 YVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTF 297
Query: 122 SFLLSVCARCGLFREGEQVHGRV--LASGYCSNVFIRTN--LMNLYLMSGGECG-VGCAR 176
+ +LS CA G F G+ VHG++ L + + N L+ LY +CG + AR
Sbjct: 298 TSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLY----SKCGNIAVAR 353
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
+FD+M ++ VVSWN++L GYV+ +D A ++F+EMP++N +SW M+SG G S
Sbjct: 354 RIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSED 413
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
AL LFN MR V A+SAC E+G LK GK +H ++ + G S N
Sbjct: 414 ALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSN----SAGN 469
Query: 297 ALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------- 343
ALI MYA CG ++EA +F M ++VSW +MI+ + G+ +EAL
Sbjct: 470 ALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYP 529
Query: 344 --LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
++FL VL+AC+H G VDEG Q+FE M +++GI P +HY ++DL RAG + EA L
Sbjct: 530 DRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDL 589
Query: 402 VQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAK 461
++ MP +P ++ ++L GCR + EL + A +L ++ P+ Y+ L++N Y+AA
Sbjct: 590 IKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLF-KMTPQHDGTYI-LLSNTYSAAG 647
Query: 462 RWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAM 521
RW D A VR+ M GV+K PG SW++ +H FV GD+ + +A +YK L + +
Sbjct: 648 RWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKHPEAHKVYKFLEMVGARMR 707
Query: 522 QEGYKPDISELFLGIE 537
+ GY PD + +E
Sbjct: 708 KLGYVPDTKVVLHDME 723
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 166/339 (48%), Gaps = 23/339 (6%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENP--STAIWNQMIRGHARSETPEKSVYLYKQMIDKET- 114
L+A Y +G L A F+ T + N +I +AR+ +V +++ ++ +
Sbjct: 94 LVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSL 153
Query: 115 EPDEYTYSFLLSVCARCG--LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV 172
PD+Y+++ LLS R Q+ VL SG + + L+ LY+
Sbjct: 154 RPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEAT 213
Query: 173 GCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNG 232
AR + D+MP + ++W +++ GYV+RGD+ A +F+E+ + V W MISG +G
Sbjct: 214 RDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSG 273
Query: 233 KSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH---SYVEENFSVGREP 289
+A LF M RV LD+ + LSACA G GK +H + ++ NF
Sbjct: 274 MVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFV---PE 330
Query: 290 VLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------ 343
+ +NNAL+ +Y+ CG I A +F M+ ++ VSW ++++G+ + +A+
Sbjct: 331 AALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEM 390
Query: 344 -----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
L+++ ++S HGGF ++ + F M +KP
Sbjct: 391 PYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAE-DVKP 428
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 134/321 (41%), Gaps = 50/321 (15%)
Query: 27 LQIRNTTKTLFQ------IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTEN 80
L + N TL+ + +I N S+ +L+ YV S L A +VFE+
Sbjct: 333 LPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPY 392
Query: 81 PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
+ W M+ G+ E ++ L+ +M ++ +P +YTY+ +S C G + G+Q+
Sbjct: 393 KNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQL 452
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVK 199
HG ++ G+ + L+ +Y CG V A L+F MP VSWN+
Sbjct: 453 HGHLVQLGFEGSNSAGNALITMY----ARCGAVKEANLMFLVMPNIDSVSWNA------- 501
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
MIS Q+G R+AL LF+ M + D+++ +
Sbjct: 502 ------------------------MISALGQHGHGREALELFDRMVAEGIYPDRISFLTV 537
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSV--GREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
L+AC G + G ++ +F + G + LI + G I EA + +
Sbjct: 538 LTACNHSGLVDEGFQYFESMKRDFGIIPGEDHY-----TRLIDLLGRAGRIGEARDLIKT 592
Query: 318 MQRRNTVS-WTSMITGFAKQG 337
M T S W ++++G G
Sbjct: 593 MPFEPTPSIWEAILSGCRTSG 613
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 9/186 (4%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H ++ GF N L+ Y G + A+ +F N + WN MI +
Sbjct: 451 QLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHG 510
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLAS-GYCSNVFIR 156
+++ L+ +M+ + PD ++ +L+ C GL EG Q + G
Sbjct: 511 HGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHY 570
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVS-WNSLLKGYVKRGDID----GAWKIFD 211
T L++L +G +G AR L MP S W ++L G GD++ A ++F
Sbjct: 571 TRLIDLLGRAG---RIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFK 627
Query: 212 EMPHRN 217
P +
Sbjct: 628 MTPQHD 633
>gi|357133503|ref|XP_003568364.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Brachypodium distachyon]
Length = 554
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 176/509 (34%), Positives = 290/509 (56%), Gaps = 36/509 (7%)
Query: 20 TRQI----FSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVF 75
TRQ+ + L+ + + L ++H+ + SQ +Y+ +++ G + +A +VF
Sbjct: 9 TRQVEDAVMASLRACASFRDLLRVHAHAVRLSLSQSSYLATQIVHLCNAHGRVAHATRVF 68
Query: 76 EKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEP-------DEYTYSFLLSVC 128
+ P+ + N MI+ +A++ ++ +Y +M+ + P D +TY FLL C
Sbjct: 69 SQVREPNLHLHNAMIKAYAQNHRHLDAITVYIRMLRRRPFPWISCTGGDRFTYPFLLKAC 128
Query: 129 ARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVV 188
G+QVHG V+ SG SN ++ +L+ +Y +G + AR +FD M R VV
Sbjct: 129 GGLMALDLGKQVHGHVVRSGCESNAIVQNSLIEMYTRAGD---LVLARKVFDGMQERDVV 185
Query: 189 SWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR 248
SWN+++ + + G + A +F+ MP + VVSWT ++SG G A+ F M+
Sbjct: 186 SWNTVISAHARLGQMRKARAVFNSMPDKTVVSWTALVSGYTAAGDFSGAVEAFRLMQMEG 245
Query: 249 VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEI 308
D V++VA L ACA++G L+LG+WI++Y + + RE + NAL+ MYA CG I
Sbjct: 246 FEPDDVSIVAVLPACAQLGALELGRWIYAYCNRH-QMLRETYVC---NALVEMYAKCGCI 301
Query: 309 EEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSA 352
++A +F M ++ +SW++M+ G A G AQEA+ +TF+G+LSA
Sbjct: 302 DQALQLFNGMAEKDVISWSTMVGGLAAHGRAQEAVQLFTEMERQGTVKPNGITFVGLLSA 361
Query: 353 CSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDA 412
CSH G +DEG +F+ MN +GI+P +EHYGC+VDL R+G + L+ +MP+ +
Sbjct: 362 CSHAGLLDEGLDYFDRMNDVYGIEPGVEHYGCIVDLLCRSGQIQRTLDLISDMPLPADAK 421
Query: 413 VLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQK 472
+ GS+L CR H + + A A++LVA ++PE G L ++ANVYAAA+RW +VA R+
Sbjct: 422 IWGSVLNACRSHGDVDTAVLAAERLVA-LEPED-VGNLVMLANVYAAARRWSEVANTRKA 479
Query: 473 MIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+ +RK PG S ++++ V+ +FVAG+
Sbjct: 480 IRSRSMRKTPGCSLIEVDNVVQEFVAGED 508
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 185/550 (33%), Positives = 302/550 (54%), Gaps = 65/550 (11%)
Query: 12 ATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAK-------LLAFYVT 64
+T + + +LLQ N L QIH+ I+ G +L K + A
Sbjct: 21 STPNPRAPEQNCLALLQACNALPKLTQIHTHILKLGLHNNPLVLTKFASISSLIHATDYA 80
Query: 65 SGYLINAHKVFEKTENPSTAIWNQMIRGHARS-ETPEKSVYLYKQMIDKETEPDEYTYSF 123
+ +L +A T ++N +IR +A++ + +K++ LY M+ P+++TY F
Sbjct: 81 ASFLFSAEA---DTRLYDAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPF 137
Query: 124 LLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMP 183
+L CA + G+ VHG V+ G+ ++ ++ ++++Y C CA
Sbjct: 138 VLKACAGLEVLNLGQTVHGSVVKFGFDCDIHVQNTMVHMY-----SC---CA-------- 181
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
G I+ A K+FDEMP + V+W+ MI G A+ G+S +A++LF E
Sbjct: 182 -----------------GGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFRE 224
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
M+ A V D++ +V+ LSAC ++G L+LGKWI +Y+E + +PV VS NALI M+A
Sbjct: 225 MQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEI--HKPVEVS--NALIDMFA 280
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLG 348
CG+I +A +FR M + VSWTS+I G A G QEA + F+G
Sbjct: 281 KCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIG 340
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
+LSACSH G V+ GR++F M + + + P+IEHYGCMVD++ R GL+ EA V+NMP++
Sbjct: 341 LLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIE 400
Query: 409 PNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAA 468
PN +L +L+ CR H +L ++ KL+ + +P + Y+ L++N+YA W+
Sbjct: 401 PNPVILRTLVSACRGHGEFKLGEKIT-KLLMKHEPLHESNYV-LLSNIYAKTLSWEKKTK 458
Query: 469 VRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
+R+ M G++K PG + ++I+ +++FVAGD ++KQ IY+ + E+ + + GY+P
Sbjct: 459 IREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKSGYRPS 518
Query: 529 ISELFLGIEE 538
SE+ L I E
Sbjct: 519 TSEVLLDINE 528
>gi|255551084|ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544410|gb|EEF45931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 172/495 (34%), Positives = 286/495 (57%), Gaps = 33/495 (6%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
H+ +I SQ N+++ K++ + + A +F++ +P+ ++N MIR +
Sbjct: 8 HALVIKYALSQSNFLVTKMIDVCDRNEDMDYASFLFKEVIDPNAYLYNAMIRACTHNSMY 67
Query: 100 EKSVYLYKQMI----DKETE-----PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYC 150
++ YKQM+ + +T PDE+T+ F++ CAR GL G+QVH + G
Sbjct: 68 SLTIDFYKQMLREYRNSQTSEDLILPDEFTFPFVVKACARLGLHNLGKQVHAQFFKFGKK 127
Query: 151 SNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIF 210
S++ L+++Y A LFD+M R +SWN ++ G+V+ G + A +F
Sbjct: 128 SHLITENALIDMYTKCDNLLD---AHNLFDEMHERGAISWNGIISGHVRLGQMRRARALF 184
Query: 211 DEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLK 270
DEMP+R +VSWT +ISG + G AL +F EM+ A + D+ ++++ L ACA++G L+
Sbjct: 185 DEMPNRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGIEPDEASIISVLPACAKLGALE 244
Query: 271 LGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMI 330
GKWIH + N + R + NALI MY CG I++A +F +M+ R+ +SW++MI
Sbjct: 245 TGKWIHMFCARNGLLRR----TCICNALIEMYTKCGCIDQACQLFDQMRGRDVISWSTMI 300
Query: 331 TGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGI 375
G A G +EA+ +TF+G+LSAC+H GF +EG +F+ M +++ I
Sbjct: 301 GGLANHGKVREAIAIFERMKQTNIKPNGITFVGLLSACAHAGFWEEGLMYFDTMKKDFHI 360
Query: 376 KPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQ 435
+P IEHYG +VDL RAG + +A +V+ MPMKP+ + GSLL CR H N E+A +A
Sbjct: 361 EPEIEHYGSLVDLLGRAGRLSQALDIVEKMPMKPDSKIWGSLLSSCRTHCNIEVAV-IAM 419
Query: 436 KLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHD 495
+ + E++P+ Y+ L++N+YA +W DV+ +R+ + ++K PG S +++N V +
Sbjct: 420 EHLEELEPDDTGNYV-LLSNIYADLGKWDDVSRMRKLVRSKRMKKTPGCSLIEVNNVAQE 478
Query: 496 FVAGDSTYKQASLIY 510
FV+GD + + I+
Sbjct: 479 FVSGDDSKPYSKEIF 493
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 107/247 (43%), Gaps = 44/247 (17%)
Query: 38 QIHSQIIINGFSQKNYILAK--LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHAR 95
Q+H+Q F +K++++ + L+ Y L++AH +F++ WN +I GH R
Sbjct: 116 QVHAQFF--KFGKKSHLITENALIDMYTKCDNLLDAHNLFDEMHERGAISWNGIISGHVR 173
Query: 96 -----------SETPEKSVYLYKQMIDKET--------------------EPDEYTYSFL 124
E P +++ + +I T EPDE + +
Sbjct: 174 LGQMRRARALFDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGIEPDEASIISV 233
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMP 183
L CA+ G G+ +H +G I L+ +Y +CG + A LFD M
Sbjct: 234 LPACAKLGALETGKWIHMFCARNGLLRRTCICNALIEMY----TKCGCIDQACQLFDQMR 289
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV----VSWTTMISGCAQNGKSRQALS 239
R V+SW++++ G G + A IF+ M N+ +++ ++S CA G + L
Sbjct: 290 GRDVISWSTMIGGLANHGKVREAIAIFERMKQTNIKPNGITFVGLLSACAHAGFWEEGLM 349
Query: 240 LFNEMRR 246
F+ M++
Sbjct: 350 YFDTMKK 356
>gi|225427280|ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 719
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 197/566 (34%), Positives = 299/566 (52%), Gaps = 86/566 (15%)
Query: 32 TTKTLFQIHSQIIINGFSQKNYILAKLLAFYVT-SGYLINAHKVFEKTENPSTAIWNQMI 90
+TK QIH+Q+I++G Q+ + + + + +A +FE E P I N ++
Sbjct: 71 STKEFNQIHTQLIVSGLLQQPLAAGRAVKTLCSFPDSVQHAVSLFEGLEEPDAFICNTIM 130
Query: 91 RGHARSETPEKSV-YLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGY 149
R + P ++ + Y+QM+ K P+ YT+ L+ VC G +GE++H R+L G+
Sbjct: 131 RTYVNVNDPYTALGFYYEQMVRKCVAPNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGF 190
Query: 150 CSNVFIRTNLMNLYLMSG------------------------------GECGVGCARLLF 179
++F+R +L+++Y + G GE +G AR LF
Sbjct: 191 ELDLFVRNSLIHMYSVCGRIGDARAMFEVCSISDLVTWNSMIDGYVKNGE--IGAARELF 248
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
++MP R + SWNS++ GYV GD+ A +F++MP R++VSW MI G AQ A
Sbjct: 249 EEMPERDLFSWNSMIAGYVGNGDMTAAEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACE 308
Query: 240 LFNEMRRARV------------------------------GLDQVALVAALSACAEIGDL 269
LFN M V ++ LV+ L+ACA +G L
Sbjct: 309 LFNWMPYRNVVSWNIMLALYVRIKDYDECLRMFDKMMGETMPNEATLVSVLTACAHLGRL 368
Query: 270 KLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSM 329
GKWIHSY++ N + EP ++ L+ AL+ MYA CG ++ A VF KM R+ VSW SM
Sbjct: 369 DRGKWIHSYIKNNRVI--EPDVL-LSTALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSM 425
Query: 330 ITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWG 374
I G+ G A +AL TF+ VLSAC+H G + EG +F+ M + +
Sbjct: 426 IMGYGMHGQADKALEMFLDMEKRGPMPNDATFICVLSACAHSGMILEGWWYFDLMRRAYK 485
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVA 434
I+P++EHYGCMVDL RAGLM + L++ MPM+ A+ G+LL CR H+N+ELA VA
Sbjct: 486 IEPKVEHYGCMVDLLGRAGLMKDLEELIRKMPMEGGTALWGALLSACRTHSNSELAEIVA 545
Query: 435 QKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGV-L 493
++L+ E++P YL L++N+YAA +W DV VR+ M + G+ K G SWV I
Sbjct: 546 KRLI-ELEPRDIGPYL-LLSNIYAAEGKWDDVEIVRKMMKERGLTKTTGFSWVHIEEFGT 603
Query: 494 HDFVAGDSTYKQASLIYKTLGEITMQ 519
FV S +++ S++Y L ++ Q
Sbjct: 604 QSFVEKASVHRK-SMMYSILSDMATQ 628
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 139/367 (37%), Gaps = 49/367 (13%)
Query: 120 TYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGC----- 174
++ L ++ + CG +E Q+H +++ SG L+ L +G C
Sbjct: 58 SHPILRTLESCCGSTKEFNQIHTQLIVSG----------LLQQPLAAGRAVKTLCSFPDS 107
Query: 175 ---ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVV-----SWTTMIS 226
A LF+ + N++++ YV D A + E R V ++ ++
Sbjct: 108 VQHAVSLFEGLEEPDAFICNTIMRTYVNVNDPYTALGFYYEQMVRKCVAPNHYTFPLLVK 167
Query: 227 GCAQNGKSRQALSLFNEMRRARVGLD---QVALVAALSACAEIGDLKLGKWIHSYVEENF 283
C + G + + + LD + +L+ S C IGD + F
Sbjct: 168 VCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGRIGDAR----------AMF 217
Query: 284 SVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG--YAQE 341
V LV+ N++I Y GEI A +F +M R+ SW SMI G+ G A E
Sbjct: 218 EVCSISDLVTW-NSMIDGYVKNGEIGAARELFEEMPERDLFSWNSMIAGYVGNGDMTAAE 276
Query: 342 AL---LTFLGVLS-ACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDE 397
L + F ++S C G+ C NW + + M+ L+ R DE
Sbjct: 277 DLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELFNWMPYRNVVSWNIMLALYVRIKDYDE 336
Query: 398 AFSLVQNM--PMKPNDAVLGSLLLGC----RIHNNAELASQVAQKLVAEIDPEQAAGYLA 451
+ M PN+A L S+L C R+ + S + V E D + L
Sbjct: 337 CLRMFDKMMGETMPNEATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEPDVLLSTALLT 396
Query: 452 LVANVYA 458
+ A A
Sbjct: 397 MYAKCGA 403
>gi|359493517|ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Vitis vinifera]
Length = 573
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 187/517 (36%), Positives = 288/517 (55%), Gaps = 34/517 (6%)
Query: 23 IFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS-GYLINAHKVFEKTENP 81
+ +LL+ L Q+ + +I G +Q ++ KLL F + L A +F+ E+P
Sbjct: 58 VLALLERCIHLNHLKQLQAFLITLGHAQTHFYAFKLLRFCTLALSNLSYARFIFDHVESP 117
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKETE-PDEYTYSFLLSVCARCGLFREGEQV 140
+ ++ MI +A ++ LY+ M+ + P+ + Y +L C + V
Sbjct: 118 NVYLYTAMITAYASHSDHTSALLLYRNMVRRRRPWPNHFIYPHVLKSCTQVVGPGSARMV 177
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKR 200
H +VL SG+ ++T L++ YL + V ARLLFD+M R+VVSW +++ GY +
Sbjct: 178 HCQVLRSGFEQYPVVQTALLDAYLRFWSD--VESARLLFDEMTERNVVSWTAMISGYTRL 235
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL-------DQ 253
G I A +F+EMP R+V SW +I+G QNG +ALSLF M G +Q
Sbjct: 236 GQIGNAVLLFEEMPERDVPSWNALIAGYTQNGLFMEALSLFRRMIAVEAGAWGQGNRPNQ 295
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
V V +LSAC G L+LGKWIH YV N +G + + +NAL+ MY CG ++EA
Sbjct: 296 VTAVCSLSACGHTGMLRLGKWIHGYVYRN-GLGLDSFV---SNALVDMYGKCGCLKEARR 351
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEAL-----------------LTFLGVLSACSHG 356
VF + R+ SW SMI A G +Q A+ +TF+G+L+AC+HG
Sbjct: 352 VFDRTLERSLTSWNSMINCLALHGQSQNAISVFEEMMTCGSGVKPDEVTFIGLLNACTHG 411
Query: 357 GFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGS 416
G V++G +FE M QN+GI+P+IEHYGC+VDL RAG +EA +V+ M ++P++ + GS
Sbjct: 412 GLVEKGWLYFELMTQNYGIEPQIEHYGCLVDLLGRAGQFEEAMEVVRGMRIEPDEVIWGS 471
Query: 417 LLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKM 476
LL GC+IH + +LA +KL+ ++DP GY ++AN+Y +W +V VR+ + +
Sbjct: 472 LLNGCKIHGHTDLAEFSIKKLI-DMDPNN-GGYGIMLANIYGELGKWDEVRKVRKVLKEQ 529
Query: 477 GVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTL 513
K PG SW++I+ +H F + D T+ + IY TL
Sbjct: 530 NAHKTPGCSWIEIDNQVHQFYSVDKTHPRTEEIYNTL 566
>gi|297743485|emb|CBI36352.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 193/569 (33%), Positives = 293/569 (51%), Gaps = 92/569 (16%)
Query: 11 PATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYL 68
P T +L SL++ + L QIHSQ I G + A+++AF G +
Sbjct: 10 PPTHLPSLPQTPPLSLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDM 69
Query: 69 INAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVC 128
A VF+ P+ +WN MI+G++R P +V +Y +M+++ PDEYTY FLL
Sbjct: 70 EYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRF 129
Query: 129 ARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVV 188
R + G ++H ++ G+ SNVF++ L++LY +SG V AR +FD VV
Sbjct: 130 TRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGE---VSVARGVFDRSSKGDVV 186
Query: 189 SWNSLLKGYVKRGDIDGAWKIFDEM----------------------------------- 213
+WN ++ GY + D + K+FDEM
Sbjct: 187 TWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRNY 246
Query: 214 ----PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDL 269
P R+ VSWT MI G Q + ++ LSLF EM+ A + D+ +V+ L+ACA +G L
Sbjct: 247 FDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGAL 306
Query: 270 KLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSM 329
+LG+WI +Y+++N + + NALI MY +CG +E+A +F M R+ +SWT++
Sbjct: 307 ELGEWIKAYIDKN----EIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAV 362
Query: 330 ITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLF 389
I G A GY +EAL F +L A I P
Sbjct: 363 IFGLAINGYGEEALDMFSQMLKA---------------------SITP------------ 389
Query: 390 SRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGY 449
DE +++NMP+KPN V GSLL CR+H + E+A AQ+++ E++PE A Y
Sbjct: 390 ------DE---VIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQIL-ELEPENGAVY 439
Query: 450 LALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLI 509
+ L+ N+YAA RW+ + VR+ M+ G++K PG S +++NG +H+FVAGD + Q+ I
Sbjct: 440 V-LLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEI 498
Query: 510 YKTLGEITMQAMQEGYKPDISELFLGIEE 538
Y L E+++ GY PD SE+FL I E
Sbjct: 499 YSKLDEMSVDLKFAGYSPDTSEVFLDIGE 527
>gi|297811669|ref|XP_002873718.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319555|gb|EFH49977.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 548
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 188/520 (36%), Positives = 284/520 (54%), Gaps = 57/520 (10%)
Query: 19 TTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLL--AFYVTSGYLINAHKVFE 76
T R+ L Q +TL QIH+ +++NG ++ +L+ A G L AHK+FE
Sbjct: 11 TNRRRSKLWQNCKNFRTLMQIHAFMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFE 70
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
+ P +I N ++RG A+S PEK+V LY +M + PD YT++F+L C++
Sbjct: 71 EIPKPDVSICNHVLRGSAQSLKPEKTVALYTEMEKRGVSPDRYTFTFVLKACSKLEWRSN 130
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLK 195
G +HG+V+ G+ N +++ N ++ CG +G A LFDD V+W+S+
Sbjct: 131 GFAIHGKVVRHGFLLNEYVK----NALILFHANCGDLGIASELFDDSAKAHKVAWSSMTS 186
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQN------------------------ 231
GY KRG ID A ++FDEMP ++ V+W MI+GC +
Sbjct: 187 GYAKRGKIDEAMRLFDEMPDKDQVAWNVMITGCLKCREMDSARELFDRFTEKDVVTWNAM 246
Query: 232 -------GKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFS 284
G ++ALS+F EMR A D V +++ LSACA +GDL+ GK +H Y+ E S
Sbjct: 247 ISGYVNCGYPKEALSIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETAS 306
Query: 285 VGREP-VLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL 343
V V + NALI MYA CG I+ A VFR M+ R+ +W ++I G A +A+ ++
Sbjct: 307 VSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGMKDRDLSTWNTLIVGLALH-HAEGSV 365
Query: 344 ---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDL 388
+TF+GV+ ACSH G VDEGR++F M + I+P I+HYGCMVD+
Sbjct: 366 EMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDM 425
Query: 389 FSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAG 448
RAGL++EAF V++M ++PN V +LL C+I+ N EL +KL++ E +G
Sbjct: 426 LGRAGLLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDE--SG 483
Query: 449 YLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
L++N+YA+ +W V VR+ V+KP G S ++
Sbjct: 484 DYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGISLIE 523
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/516 (33%), Positives = 281/516 (54%), Gaps = 55/516 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++HS ++ G ++ L+ Y G++ NA KVF+ + + A W I G+
Sbjct: 129 KMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVG 188
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ +++++++ PD ++ +LS C R G R GE + + +G NVF+ T
Sbjct: 189 KCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVAT 248
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L++ Y G+CG +++ A +FD M +N
Sbjct: 249 ALVDFY----GKCG------------------------------NMERARSVFDGMLEKN 274
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+VSW++MI G A NG ++AL LF +M + D A+V L +CA +G L+LG W +
Sbjct: 275 IVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASN 334
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
+ N + L ALI MYA CG ++ A+ VFR M++++ V W + I+G A G
Sbjct: 335 LINGNEFLDNS----VLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSG 390
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+ ++AL TF+G+L AC+H G V+EGR++F M + + P IEHY
Sbjct: 391 HVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHY 450
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
GCMVDL RAG +DEA L+++MPM+ N V G+LL GCR+H + +L V +KL+A ++
Sbjct: 451 GCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIA-LE 509
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P + Y+ L++N+YAA+ +W++ A +R M + GV+K PG SW++++GV+H F+ GD++
Sbjct: 510 PWHSGNYV-LLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGDTS 568
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ + IY LGE+ GY P + IEE
Sbjct: 569 HPLSEKIYAKLGELAKDLKAAGYVPTTDHVLFDIEE 604
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 196/412 (47%), Gaps = 60/412 (14%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAH 72
T S + R L+Q + K L IH+ ++ G + Y+L K+L F G +
Sbjct: 7 TKSAGIKNR----LIQGFSCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSF 62
Query: 73 KVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCG 132
++ ++T+ P+ ++N MIRG ++ ++S+ +Y M + PD +T+ F+L CAR
Sbjct: 63 RILDQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVL 122
Query: 133 LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWN 191
G ++H V+ +G ++ F++ +L+NLY +CG + A +FDD+P ++ SW
Sbjct: 123 DSELGVKMHSLVVKAGCEADAFVKISLINLYT----KCGFIDNAFKVFDDIPDKNFASWT 178
Query: 192 SLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL 251
+ + GYV GK R+A+ +F + +
Sbjct: 179 ATISGYVGV-------------------------------GKCREAIDMFRRLLEMGLRP 207
Query: 252 DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEA 311
D +LV LSAC GDL+ G+WI Y+ EN V V + AL+ Y CG +E A
Sbjct: 208 DSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRN----VFVATALVDFYGKCGNMERA 263
Query: 312 YGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF---------------LGVLSACSHG 356
VF M +N VSW+SMI G+A G +EAL F +GVL +C+
Sbjct: 264 RSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARL 323
Query: 357 GFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
G ++ G +N N + + ++D++++ G MD A+ + + M K
Sbjct: 324 GALELGDWASNLINGNEFLDNSVLGTA-LIDMYAKCGRMDRAWEVFRGMRKK 374
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 168/521 (32%), Positives = 293/521 (56%), Gaps = 35/521 (6%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H + + ++ L+ Y + G L +A KVF + WN MI G + +
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
P+K++ L+K+M ++ + T +LS CA+ G QV + + N+ +
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
++++Y G + A+ LFD M + V+W ++L GY D + A ++ + MP +++
Sbjct: 273 MLDMYTKCGS---IEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDI 329
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMR-RARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
V+W +IS QNGK +AL +F+E++ + + L+Q+ LV+ LSACA++G L+LG+WIHS
Sbjct: 330 VAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHS 389
Query: 278 YVEE-----NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
Y+++ NF V +ALIHMY+ CG++E++ VF +++R+ W++MI G
Sbjct: 390 YIKKHGIRMNFHV---------TSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGG 440
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
A G EA+ +TF V ACSH G VDE F M N+GI P
Sbjct: 441 LAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVP 500
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
+HY C+VD+ R+G +++A ++ MP+ P+ +V G+LL C+IH N LA +L
Sbjct: 501 EEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRL 560
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
+ E++P ++ L++N+YA +W++V+ +R+ M G++K PG S ++I+G++H+F+
Sbjct: 561 L-ELEPRNDGAHV-LLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFL 618
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+GD+ + + +Y L E+ + GY+P+IS++ IEE
Sbjct: 619 SGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEE 659
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 215/468 (45%), Gaps = 96/468 (20%)
Query: 8 PANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY 67
P P T+++ +R I SL++ + + L Q H +I G Y +KL A S +
Sbjct: 21 PNQPTTNNE--RSRHI-SLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSF 77
Query: 68 --LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMI-DKETEPDEYTYSFL 124
L A KVF++ P++ WN +IR +A P S++ + M+ + + P++YT+ FL
Sbjct: 78 ASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFL 137
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPA 184
+ A G+ +HG + S S+VF+ +L++ Y S G+ C +F +
Sbjct: 138 IKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYF-SCGDLDSACK--VFTTIKE 194
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
+ VVSWNS++ G+V++G D A ++F +M +V +
Sbjct: 195 KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKA------------------------ 230
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYAS 304
V +V LSACA+I +L+ G+ + SY+EEN R V ++L NA++ MY
Sbjct: 231 -------SHVTMVGVLSACAKIRNLEFGRQVCSYIEEN----RVNVNLTLANAMLDMYTK 279
Query: 305 CGEIEEAYGVFRKMQRRNTVSWTSMITGFA------------------------------ 334
CG IE+A +F M+ ++ V+WT+M+ G+A
Sbjct: 280 CGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAY 339
Query: 335 -KQGYAQEALLTF----------------LGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
+ G EAL+ F + LSAC+ G ++ GR + ++ GI+
Sbjct: 340 EQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKH-GIRM 398
Query: 378 RIEHYGCMVDLFSRAGLMD---EAFSLVQNMPMKPNDAVLGSLLL-GC 421
++ ++S+ G ++ E F+ V+ + A++G L + GC
Sbjct: 399 NFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGC 446
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 184/496 (37%), Positives = 279/496 (56%), Gaps = 54/496 (10%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
L+ Y G L +A ++FE+ WN MI G+A+S E+++ +++M P+
Sbjct: 204 LITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPN 263
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
E T +LS CA+ G G V + G SN+ RL
Sbjct: 264 ESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNL----------------------RL 301
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
+ N+L+ Y K GD+D A +F+ + ++++SW MI G + ++A
Sbjct: 302 V------------NALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEA 349
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
L+LF +M+++ V + V V+ L ACA +G L LGKWIH+Y+++ F +G SL +
Sbjct: 350 LALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKF-LGLTNT--SLWTS 406
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------------- 343
LI MYA CG IE A VF M+ ++ SW +MI+G A G+A AL
Sbjct: 407 LIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPD 466
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
+TF+GVLSACSH G V+ GRQ F M +++ I P+++HYGCM+DL RAGL DEA +L+
Sbjct: 467 DITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALM 526
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKR 462
+NM MKP+ A+ GSLL CR+H N EL + A K + E++PE Y+ L++N+YA A R
Sbjct: 527 KNMEMKPDGAIWGSLLGACRVHGNVELG-EFAAKHLFELEPENPGAYV-LLSNIYATAGR 584
Query: 463 WQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQ 522
W DVA +R K+ G++K PG S ++++ V+H+F+ GD ++Q+ IYK L EI +
Sbjct: 585 WDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEK 644
Query: 523 EGYKPDISELFLGIEE 538
G+ PD SE+ ++E
Sbjct: 645 AGHVPDTSEVLYDMDE 660
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 152/445 (34%), Positives = 251/445 (56%), Gaps = 31/445 (6%)
Query: 16 KALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHK 73
K L +LL + + L QIHSQII G + L+KL+ F S G L A
Sbjct: 28 KLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALL 87
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGL 133
+FE E P+ IWN MIRG++ S +P ++ Y +M+ EP+ YT+ FLL CA+ G
Sbjct: 88 LFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGA 147
Query: 134 FREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSL 193
+EG+Q+HG VL G S+ F+ T+L+N+Y +G +G A L+F R VS+ +L
Sbjct: 148 TQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNG---ELGYAELVFSKSSLRDAVSFTAL 204
Query: 194 LKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQ 253
+ GY RG +D A ++F+E+P R+ VSW MI+G AQ+G+ +AL+ F EM+RA V ++
Sbjct: 205 ITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNE 264
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
+V LSACA+ G L+LG W+ S++E++ +G LV NALI MY+ CG++++A
Sbjct: 265 STMVTVLSACAQSGSLELGNWVRSWIEDH-GLGSNLRLV---NALIDMYSKCGDLDKARD 320
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGF 358
+F + ++ +SW MI G++ +EAL +TF+ +L AC++ G
Sbjct: 321 LFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGA 380
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGS-- 416
+D G+ +++ + + ++D++++ G ++ A + MKP LGS
Sbjct: 381 LDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAG--MKPKS--LGSWN 436
Query: 417 -LLLGCRIHNNAELASQVAQKLVAE 440
++ G +H +A +A ++ +++ E
Sbjct: 437 AMISGLAMHGHANMALELFRQMRDE 461
>gi|224118458|ref|XP_002331487.1| predicted protein [Populus trichocarpa]
gi|222873565|gb|EEF10696.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 196/569 (34%), Positives = 308/569 (54%), Gaps = 66/569 (11%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV--TSGYLIN 70
+ + + T I ++ + L QI + + + ++++LAF SG + +
Sbjct: 43 SPTNTIITHPILLAMESCTSMLQLKQIQAHMTKTALISHTFPVSRVLAFCALSDSGDINH 102
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
AH +F + +NP+T IWN MIRG+++++ + + QM+ K E D ++ F L C +
Sbjct: 103 AHLLFSQLQNPNTYIWNTMIRGYSKAKMGQTGFLFFCQMVQKGVEMDCRSFVFALKACEQ 162
Query: 131 CGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSW 190
EG+ VH V G+ + ++ L++ Y + G +G ARL+FD++ R VVSW
Sbjct: 163 FLGVLEGKSVHCVVWKMGFVYTLLVQNGLVHFYGLRG---CLGLARLVFDEISERDVVSW 219
Query: 191 NSLLKGYVKRGDIDGAWKIFDEM-----PHRNVVSWTTMISGCAQNG------------K 233
S++ GY K D A K+FD M N V+ ++S C+Q G K
Sbjct: 220 TSMIDGYSKHKWCDEALKLFDSMLMYGVVEPNEVTMIAVLSSCSQKGDLILGKTFLEYVK 279
Query: 234 SR---QALSLFNE----------MRRARVGLDQVA---------LVAALSACAEIGDLKL 271
+R ++L+L N + AR D + L L C ++G L +
Sbjct: 280 TRNVTRSLNLMNAILDMYVKCGCLDSAREIFDTMGAAFAPMENTLACVLPVCGQLGCLDV 339
Query: 272 GKWIH-SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMI 330
G+WIH +YV ++ + V L NALI MYA CG I EA VF M RN VSW SMI
Sbjct: 340 GQWIHRNYVRMRYN----EISVILANALIDMYAKCGVIHEAAKVFNDMPERNLVSWNSMI 395
Query: 331 TGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGI 375
T +A G+A++AL +T +GVLSACSHGG V EG+++F+ M + +GI
Sbjct: 396 TAYASHGHAKQALSVFERMISGGFKPDDITLVGVLSACSHGGLVAEGQEYFQNMKRKYGI 455
Query: 376 KPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQ 435
+P+ EHY CM+DL R GL+++A+ L+ MPM+P+ A G+L+ CR+H N E+A A
Sbjct: 456 EPKNEHYACMIDLLGRVGLLEDAYELITKMPMEPSAAAWGALVHACRMHGNVEVAKIAAP 515
Query: 436 KLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHD 495
+L+ E+DPE + Y+ L+AN+ A+ +RW DV R+ M + V+K PG+S V++ G H+
Sbjct: 516 RLL-ELDPEDSGIYV-LLANICASGRRWGDVKMARRMMRERRVKKIPGRSIVEVEGQFHE 573
Query: 496 FVAGDSTYKQASLIYKTLGEITMQAMQEG 524
F+AGD ++ Q+ IY L ++ + EG
Sbjct: 574 FLAGDESHPQSEGIYNALDQLFAMSKLEG 602
>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 182/521 (34%), Positives = 301/521 (57%), Gaps = 62/521 (11%)
Query: 34 KTLFQIHSQIIINGF--SQKNYILAKLLAFYVTS--GYLINAHKVFEKTENPSTAIWNQM 89
+ L Q+H+ I+ S + L+K++AF S G + A VF + +P+ WN +
Sbjct: 2 RVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNSL 61
Query: 90 IRGHARSETPEKS-VYLYKQMIDKETE-PDEYTYSFLLSVCARCGLFREGEQVHGRVLAS 147
I+G+++ T K ++L+K++ + P+ +T +F+L CA F EG QVH VL
Sbjct: 62 IKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLKD 121
Query: 148 GYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAW 207
G+ S++F++T+L+N Y G+C +I A
Sbjct: 122 GFGSSLFVQTSLVNFY----GKCE------------------------------EIGFAR 147
Query: 208 KIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIG 267
K+F+EMP RN+V+WT MISG A+ G +A+ LF EM++A + D + LV+ +SACA G
Sbjct: 148 KVFEEMPVRNLVAWTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLVSVVSACAVAG 207
Query: 268 DLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
L +G W+H+Y+E+ F + + L+ AL+ MYA CG IE A VF M ++T +W+
Sbjct: 208 ALDIGYWLHAYIEKYFVLTD----LELSTALVDMYAKCGCIERAKQVFVHMPVKDTTAWS 263
Query: 328 SMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQN 372
SMI GFA G AQ+A+ +TFL VLSAC+HGG V GR+F+ M +
Sbjct: 264 SMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAVLSACAHGGLVSRGRRFWSLMLE- 322
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQ 432
+GI+P +EHYGC VDL R+GL++EA+ + M + PN A SLL+GC+ L
Sbjct: 323 FGIEPSVEHYGCKVDLLCRSGLVEEAYRITTTMKIPPNAATWRSLLMGCKKKKLLNLGEI 382
Query: 433 VAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGV 492
VA+ L+ E++P A Y+ +++N+Y++ +W+ ++ +R+ M + ++ PG S ++++GV
Sbjct: 383 VARYLL-ELEPLNAENYI-MISNLYSSLSQWEKMSELRKVMKEKCIKPVPGCSSIEVDGV 440
Query: 493 LHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELF 533
+H+FV GD ++ + ++ + + E++M+ GY+P IS++
Sbjct: 441 VHEFVMGDQSHPEVKMLREFMEEMSMRVRDSGYRPSISDVL 481
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 176/514 (34%), Positives = 292/514 (56%), Gaps = 25/514 (4%)
Query: 41 SQIIINGFSQKNYILAK-LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
+++I + Q+N + + ++ G ++ A K+F + + W+ +I G+ ++
Sbjct: 226 AKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMY 285
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
E+++ ++ +M DE +LS CA + + G+ +HG V+ G S V ++ L
Sbjct: 286 EEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNAL 345
Query: 160 MNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVV 219
+++Y SG + A+ LF+ +SWNS++ G +K G ++ A +FD MP +++V
Sbjct: 346 IHMYSGSGE---IMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIV 402
Query: 220 SWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV 279
SW+ +ISG AQ+ + L+LF+EM+ ++ D+ LV+ +SAC + L GKW+H+Y+
Sbjct: 403 SWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYI 462
Query: 280 EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYA 339
+N V V L L+ MY CG +E A VF M+ + SW ++I G A G
Sbjct: 463 RKN----GLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLV 518
Query: 340 QEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGC 384
+ +L +TF+GVL AC H G VDEGR F M + GI+P ++HYGC
Sbjct: 519 ERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGC 578
Query: 385 MVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPE 444
MVDL RAGL++EA L+++MPM P+ A G+LL C+ H + E+ +V +KL+ E+ P+
Sbjct: 579 MVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLI-ELQPD 637
Query: 445 QAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYK 504
G+ L++N++A+ W+DV VR M + GV K PG S ++ NGV+H+F+AGD T+
Sbjct: 638 H-DGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHP 696
Query: 505 QASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ + L E+ + EGY PD +E+ L I+E
Sbjct: 697 WINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDE 730
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 141/454 (31%), Positives = 225/454 (49%), Gaps = 87/454 (19%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY--LINAHKVFEKTENPSTAIWNQMIR 91
K +I SQ+I+ GF + ++LL F S + L + ++F++ EN + +WN M+R
Sbjct: 55 KQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMR 114
Query: 92 GHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCS 151
+ +S + EK++ LYK M+ PD YTY ++ CA L G+++H VL G+ S
Sbjct: 115 AYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDS 174
Query: 152 NVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFD 211
+V+++ L+N+Y + G + AR LFD+ P VSWNS+L GYVK+GD++ A IFD
Sbjct: 175 DVYVQNTLINMYAVCG---NMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFD 231
Query: 212 EMPHRNV-------------------------------VSWTTMISGCAQNGKSRQALSL 240
+MP RN+ VSW+ +ISG QNG +AL +
Sbjct: 232 QMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVM 291
Query: 241 FNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIH 300
F EM + LD+V +V+ LSACA + +K GK IH V +G E V+L NALIH
Sbjct: 292 FIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLV---IRMGIES-YVNLQNALIH 347
Query: 301 MYA-------------------------------SCGEIEEAYGVFRKMQRRNTVSWTSM 329
MY+ CG +E+A +F M ++ VSW+++
Sbjct: 348 MYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAV 407
Query: 330 ITGFAKQGYAQEALLTF---------------LGVLSACSHGGFVDEGRQFFECMNQNWG 374
I+G+A+ E L F + V+SAC+H +D+G+ + +N G
Sbjct: 408 ISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKN-G 466
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
+K + ++D++ + G ++ A + M K
Sbjct: 467 LKVNVILGTTLLDMYMKCGCVENALEVFNGMEEK 500
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 75/177 (42%), Gaps = 23/177 (12%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H+ I NG + LL Y+ G + NA +VF E + WN +I G A +
Sbjct: 458 VHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGL 517
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE-------QVHG---RVLASG 148
E+S+ ++ +M + P+E T+ +L C GL EG + HG V G
Sbjct: 518 VERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYG 577
Query: 149 YCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMP-ARSVVSWNSLLKGYVKRGDID 204
++ R L+N A L + MP A V +W +LL K GD +
Sbjct: 578 CMVDLLGRAGLLNE------------AEKLIESMPMAPDVATWGALLGACKKHGDTE 622
>gi|296085795|emb|CBI31119.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 180/483 (37%), Positives = 286/483 (59%), Gaps = 26/483 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKTENPSTAIWNQMIRGHAR 95
QI S + ++G + ++++F S G + +A+ +F ++ IWN M+R
Sbjct: 6 QIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLSLPRRTSFIWNTMLRAFTD 65
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
+ P + LYK M+ P+ YT+SFLL CA+ G +H + + G+ + F+
Sbjct: 66 KKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWEAYDFV 125
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
+ L++LY + C + AR LFD R VV+W +++ GY K G + A ++FDEMP
Sbjct: 126 QNGLLHLY--ASCNC-MDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMPE 182
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
+N VSW+ MI+G AQ G R+AL LFN+M+ A + A+V AL+ACA +G L G+WI
Sbjct: 183 KNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWI 242
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
H+YV+ N R + L ALI MYA CG +E A VF +M R+ ++TS+I+G A
Sbjct: 243 HAYVDRN----RMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLAN 298
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
G++ A+ +TF+ +LSACS G V+EG + F+ M +GI+P ++
Sbjct: 299 HGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQ 358
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HYGC+VDL RAG++++A +V+ MP++P+ VLG+LL CR+H + EL + + L AE
Sbjct: 359 HYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVECL-AE 417
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
+ G L++N+YA+A +W+DVA VR+ M + V+K PG S ++++G + +FVAGD
Sbjct: 418 RSLDH-GGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVPGCSLIEVDGAVFEFVAGD 476
Query: 501 STY 503
++
Sbjct: 477 MSH 479
>gi|356574121|ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Glycine max]
Length = 548
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 180/519 (34%), Positives = 300/519 (57%), Gaps = 29/519 (5%)
Query: 20 TRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV--TSGYLINAHKVFEK 77
+ + SLL + L Q+H+ +I G SQ + ++K+L F SG + +++VF +
Sbjct: 14 SHNLLSLLDKCKSILELKQLHAVVISCGLSQDDPFISKILCFSALSNSGDINYSYRVFSQ 73
Query: 78 TENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+P+ WN +IRG++ S+ P +S+ ++ +M+ PD TY FL+ AR G
Sbjct: 74 LSSPTIFSWNTIIRGYSNSKNPIQSLSIFLKMLRLGVAPDYLTYPFLVKASARLLNQETG 133
Query: 138 EQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGY 197
VH ++ +G+ S+ FI+ +L+++Y G A+ +FD + ++VVSWNS+L GY
Sbjct: 134 VSVHAHIIKTGHESDRFIQNSLIHMYAACGNSMW---AQKVFDSIQQKNVVSWNSMLDGY 190
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
K G++ A K F+ M ++V SW+++I G + G+ +A+++F +M+ A ++V +V
Sbjct: 191 AKCGEMVMAQKAFESMSEKDVRSWSSLIDGYVKAGEYSEAMAIFEKMQSAGPKANEVTMV 250
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
+ ACA +G L+ G+ I+ Y+ +N P+ + L +L+ MYA CG IEEA +FR+
Sbjct: 251 SVSCACAHMGALEKGRMIYKYIVDN----GLPLTLVLQTSLVDMYAKCGAIEEALLIFRR 306
Query: 318 MQRRNT--VSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVD 360
+ + T + W ++I G A G +E+L +T+L +L+AC+HGG V
Sbjct: 307 VSKSQTDVLIWNAVIGGLATHGLVEESLKLFKEMQIVGICPDEVTYLCLLAACAHGGLVK 366
Query: 361 EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
E FFE +++ G+ P EHY CMVD+ +RAG + A+ + MP +P ++LG+LL G
Sbjct: 367 EAWFFFESLSK-CGMTPTSEHYACMVDVLARAGQLTTAYQFICQMPTEPTASMLGALLSG 425
Query: 421 CRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRK 480
C H N LA V +KL+ E++P Y+ L +N+YA KRW D ++R+ M + GV+K
Sbjct: 426 CINHRNLALAEIVGRKLI-ELEPNHDGRYIGL-SNMYAVDKRWDDARSMREAMERRGVKK 483
Query: 481 PPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
PG S+V+I+GVLH F+A D T+ + Y L + Q
Sbjct: 484 SPGFSFVEISGVLHRFIAHDKTHPDSEETYFMLNFVVYQ 522
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 191/532 (35%), Positives = 293/532 (55%), Gaps = 68/532 (12%)
Query: 20 TRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS---GYLINAHKVFE 76
T + SLL+I+ Q H+ ++ G + +KL+AF T+ + AH +
Sbjct: 16 TERAKSLLEIQ-------QAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILN 68
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR-CGLFR 135
+ E+P+ N +IR +A S TPE ++ ++++M+ PD+Y+++F+L CA CG F
Sbjct: 69 RIESPNGFTHNSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKACAAFCG-FE 127
Query: 136 EGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLK 195
EG Q+HG + S ++VF+ L+N+Y SG AR + D MP R VSWNSLL
Sbjct: 128 EGRQIHGLFMKSDLVTDVFVENTLINVYGRSGY---FEIARKVLDRMPVRDAVSWNSLLS 184
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM----------- 244
Y+ +G ++ A +FDEM RNV SW MISG A G ++A +F+ M
Sbjct: 185 AYLDKGLVEEARALFDEMEERNVESWNFMISGYAAAGLVKEAREVFDSMPVKDVVSWNAM 244
Query: 245 --RRARVGL-------------------DQVALVAALSACAEIGDLKLGKWIHSYVEENF 283
A VG D LV LSACA +G L G+W+H Y++++
Sbjct: 245 VTAYAHVGCYNEVLEVFNMMLDDSAERPDGFTLVNVLSACASLGSLSQGEWVHVYIDKH- 303
Query: 284 SVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL 343
G E + + AL+ MY+ CG+I++A VFR +R+ +W S+ITG + G ++AL
Sbjct: 304 --GIE-IEGFVATALVDMYSKCGKIDKALEVFRDTSKRDVSTWNSIITGLSVHGLGKDAL 360
Query: 344 ---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDL 388
+TF+GVLSAC+H G +D+ R+ FE MN +GI+P IEHYGCMVDL
Sbjct: 361 EIFSEMVYEGFKPNGITFIGVLSACNHVGLLDQARKLFEMMNSVYGIEPTIEHYGCMVDL 420
Query: 389 FSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAG 448
R G +EA LV +P +L SLL C+ E A ++A +L+ E +P +++G
Sbjct: 421 LGRMGKFEEAEELVNEVPADEASILLESLLGACKRFGKLEQAERIANRLL-ESNPRESSG 479
Query: 449 YLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
Y+ + +N+YA+ RW + VR KM V+K PG S ++++GV+H+F+AG+
Sbjct: 480 YVQM-SNLYASHGRWDEAMEVRGKMRAERVKKNPGCSMIEVDGVVHEFLAGE 530
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 196/540 (36%), Positives = 296/540 (54%), Gaps = 36/540 (6%)
Query: 10 NPATSSKALTTRQ-IFSLLQI-RNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY 67
NP +SS R+ I SLL R K + IH I SQ ++ +LL Y Y
Sbjct: 15 NPHSSSHDSNLRRVIISLLHKNRKNPKHVQSIHCHAIKTRTSQDPFVAFELLRVYCKVNY 74
Query: 68 LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSV 127
+ +A K+F T+NP+ ++ +I G + ++ L+ QM+ K D Y + +L
Sbjct: 75 IDHAIKLFRCTQNPNVYLYTSLIDGFVSFGSYTDAINLFCQMVRKHVLADNYAVTAMLKA 134
Query: 128 CARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV-GCARLLFDDMPARS 186
C G++VHG VL SG + I L+ LY G+CGV AR +FD MP R
Sbjct: 135 CVLQRALGSGKEVHGLVLKSGLGLDRSIALKLVELY----GKCGVLEDARKMFDGMPERD 190
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
VV+ ++ G ++ A ++F+EM R+ V WT +I G +NG+ + L +F EM+
Sbjct: 191 VVACTVMIGSCFDCGMVEEAIEVFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQV 250
Query: 247 ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE-NFSVGREPVLVSLNNALIHMYASC 305
V ++V V LSACA++G L+LG+WIH+Y+ + V R + ALI+MY+ C
Sbjct: 251 KGVEPNEVTFVCVLSACAQLGALELGRWIHAYMRKCGVEVNR-----FVAGALINMYSRC 305
Query: 306 GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVL 350
G+I+EA +F ++ ++ ++ SMI G A G + EA+ +TF+GVL
Sbjct: 306 GDIDEAQALFDGVRVKDVSTYNSMIGGLALHGKSIEAVELFSEMLKERVRPNGITFVGVL 365
Query: 351 SACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPN 410
+ACSHGG VD G + FE M GI+P +EHYGCMVD+ R G ++EAF + M ++ +
Sbjct: 366 NACSHGGLVDLGGEIFESMEMIHGIEPEVEHYGCMVDILGRVGRLEEAFDFIGRMGVEAD 425
Query: 411 DAVLGSLLLGCRIHNNAELASQVAQKLVAE---IDPEQAAGYLALVANVYAAAKRWQDVA 467
D +L SLL C+IH N + +VA KL++E ID +G +++N YA+ RW A
Sbjct: 426 DKMLCSLLSACKIHKNIGMGEKVA-KLLSEHYRID----SGSFIMLSNFYASLGRWSYAA 480
Query: 468 AVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
VR+KM K G+ K PG S +++N +H+F +GD + + IYK L E+ EGY P
Sbjct: 481 EVREKMEKGGIIKEPGCSSIEVNNAIHEFFSGDLRHPERKRIYKKLEELNYLTKFEGYLP 540
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 180/536 (33%), Positives = 293/536 (54%), Gaps = 62/536 (11%)
Query: 24 FSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENP-- 81
+LQ NT L Q+H+ II GF +L K + + A + E+
Sbjct: 11 LDILQACNTLPKLAQLHTHIIKLGFQNNPLVLTKFTSASSNLDAIPYAMSLVFSVEDARV 70
Query: 82 -STAIWNQMIRGHARS-ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
+++ +IR +A S ++ +++ Y M+ P++Y + F+L CA G+
Sbjct: 71 YDAFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGKA 130
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVK 199
VHG ++ G+ ++F++ ++++Y G G+ AR
Sbjct: 131 VHGSLVKFGFDDDIFVQNTMVHMYCCCSG--GMEFAR----------------------- 165
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
K+FDEMP + V+WT MI G A+ G+S A+ LF +M+ A V D V +V+
Sbjct: 166 --------KLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSV 217
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVL--VSLNNALIHMYASCGEIEEAYGVFRK 317
LSAC ++G L+LGKWI SY+E +E VL V L+NAL+ M+A CG++++A G+FR
Sbjct: 218 LSACTDLGALELGKWIESYIE------KERVLKTVELSNALVDMFAKCGDVDKALGLFRN 271
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEG 362
M +R VSWTS+I G A G EA+ + F+G+LSACSH G V+ G
Sbjct: 272 MSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSHSGLVERG 331
Query: 363 RQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCR 422
RQ+F M + +GI P+IEHYGCMVDL SRAGL+ EA V+ MP++PN + +L+ CR
Sbjct: 332 RQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRTLISACR 391
Query: 423 IHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPP 482
+H +L ++++L+ +P + Y+ L++N+Y W+ + +R M K G++K P
Sbjct: 392 VHGELKLGESISKQLIRN-EPMHESNYV-LLSNIYGKMLDWEKKSKIRVAMGKKGIQKVP 449
Query: 483 GQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
G + ++++ +H+F+ GD ++ Q + I K + E+ + + GY P +E+FL I+E
Sbjct: 450 GSTMIELDNEIHEFIVGDRSHNQYNEIIKMVNEMGREMKRAGYAPTTTEVFLDIDE 505
>gi|147810456|emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]
Length = 516
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 183/485 (37%), Positives = 278/485 (57%), Gaps = 59/485 (12%)
Query: 22 QIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKTE 79
++ S+ + + K L Q+H+ +I G Q +++ K++ F S G + A +VF K E
Sbjct: 53 RVMSVFKQCESMKHLEQLHAHVIQTGLEQNLFVMGKIIVFCAVSECGSMDYALRVFGKIE 112
Query: 80 NPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
NP +WN MIRG R+ PEK+ YK+M K D +TYSFL+ VC + G G+Q
Sbjct: 113 NPDGFLWNTMIRGLGRTRQPEKAFEFYKRMQVKGEVLDNFTYSFLVKVCGQLGSDLLGKQ 172
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVK 199
+H VL G +VF+R L+++Y M + A LF++MP +V+WN
Sbjct: 173 IHCNVLKHGLEEHVFVRNTLVHMYGMFK---DIEAATHLFEEMPKSYLVAWN-------- 221
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
T+I G+ ++A+ LF M ++ + D V
Sbjct: 222 -----------------------TIIDCNVYCGRYKEAIELFFRMLQSGLKPDDATFVVT 258
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
LSACA +G+L +G+ +HS ++ +G +VS++N+LI MYA CG +E AY +F KM+
Sbjct: 259 LSACAALGELDIGRRVHSCIDHT-GLGN---VVSVSNSLIDMYAKCGVVEAAYEIFNKMK 314
Query: 320 RRNTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGR 363
RN VSW +MI G A G+ EAL +TFLGVL ACSHGG V+EGR
Sbjct: 315 GRNIVSWNTMILGLAMHGHGDEALELFSKMLEEKLATPNEVTFLGVLCACSHGGMVEEGR 374
Query: 364 QFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRI 423
++F+ M +++ I+P I+HYG MVD+ RAGL++EA+ L+++MP++ N V +LL CR+
Sbjct: 375 RYFDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRLIKSMPIESNSIVWRTLLAACRV 434
Query: 424 HNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKP-P 482
H N ELA QV Q L+ E++P+ ++ Y+ L+AN+YA+A +W V VR+ M GV+KP P
Sbjct: 435 HGNLELAEQVRQXLL-ELEPDHSSDYV-LLANMYASAGQWNKVXRVRKSMHIRGVQKPKP 492
Query: 483 GQSWV 487
G S++
Sbjct: 493 GNSYI 497
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 183/528 (34%), Positives = 299/528 (56%), Gaps = 34/528 (6%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYV--TSGYLINAHKVFEKTENPSTA-IWNQMI 90
K + H+Q+IING + L +++F SG + A + +T P T ++N I
Sbjct: 2 KQFKEAHTQLIINGLTHPPPSLRPIISFSALDPSGDIDYALLLLLRTSTPPTVFLFNTTI 61
Query: 91 RGHARSETPEK---SVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLAS 147
RG +R+ P SV L+ +M P+ +T++FL C+ C F G Q HG V+ +
Sbjct: 62 RGFSRARRPGSLLSSVLLFVRMGVLSLAPNNFTFTFLFQGCSNCVAFDLGRQFHGMVIKN 121
Query: 148 GYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAW 207
+ +VF+R +++ Y + G + AR +FD+ VVSWNS++ G ++ G+I A
Sbjct: 122 SFEMDVFVRNSIIRFYSVCGR---LNDARWVFDESSELDVVSWNSMIDGCIRNGNILEAL 178
Query: 208 KIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIG 267
+F +M RN +SW MISG AQNG+ ++AL+LF EM+ + LV+ LSAC+++G
Sbjct: 179 SLFSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQEPNSAILVSVLSACSQLG 238
Query: 268 DLKLGKWIHSYVEENFSVGREPVLVS--LNNALIHMYASCGEIEEAYGVFRKMQRRNTVS 325
L G W+H Y+ G++ V V L+ ALI MYA CG I+ A F ++R+ +
Sbjct: 239 ALDHGCWVHCYI------GKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRDVSA 292
Query: 326 WTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMN 370
+T+ I+G A G ++EAL ++++ VL ACSH G+V++G +F M+
Sbjct: 293 YTAAISGLAMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACSHAGWVEKGFHYFASMS 352
Query: 371 QNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELA 430
GI+P ++HY CMVDL RAGL++EA V +MP+KP++ + G+LL CR++ NAE+
Sbjct: 353 DVHGIRPELDHYACMVDLLGRAGLLEEAEKFVASMPIKPDNVIWGALLGACRVYGNAEMG 412
Query: 431 SQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQIN 490
+V LV E D Y+ L++N+YA + + +D VR+ M + V + PG S +++
Sbjct: 413 QRVGSLLV-ESDQNHDGRYI-LLSNIYAESMKGEDAEQVRKTMRRRKVDRVPGCSLIEVA 470
Query: 491 GVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
G +H+F +GD ++++ IY EI + + GY+ + + +EE
Sbjct: 471 GFVHEFFSGDRSHEKTEEIYLMWEEIVKEIKKFGYREETRAVVFDVEE 518
>gi|357462223|ref|XP_003601393.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|358344321|ref|XP_003636238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490441|gb|AES71644.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502173|gb|AES83376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 486
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 175/471 (37%), Positives = 275/471 (58%), Gaps = 32/471 (6%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
IH+ Q +L KL F S G L AH +F++ P+T +N +IR H+ S
Sbjct: 26 IHAHAFRTCLHQHAVVLGKLFRFAAVSPFGDLSYAHNMFDQMPQPTTFFYNTLIRAHSHS 85
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
TP S + +M PDE++++FLL +R +HG V G+C ++ ++
Sbjct: 86 TTPSFSSLFFNRMRRNSIAPDEFSFTFLLK--SRSFTMPLVHDIHGAVFKFGFCRHLHVQ 143
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPAR----SVVSWNSLLKGYVKRGDIDGAWKIFDE 212
L++LY + G AR +F+D +VSW+ LL + K G++D A K+FD
Sbjct: 144 NALIHLYAVGGVTIS---ARKVFEDAVRVGLDVDIVSWSGLLVAHAKAGELDVARKVFDG 200
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
MP R+VVSWT M+S ++ + + L LF EMR A V D+V +++ +SACAE+GD ++G
Sbjct: 201 MPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAGVWPDEVTVLSVISACAELGDAEMG 260
Query: 273 KWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
+ +H +VEEN G +V+L N+LI MY CG +EEA+ VF + +R++ ++W +M+
Sbjct: 261 RMVHKFVEEN-GFGW---MVALCNSLIDMYGKCGCLEEAWQVFDRTKRKSLITWNAMMMV 316
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
A GYA++A +T L +L A +H GFVDEG + FE M +++G++P
Sbjct: 317 CANHGYAEDAFRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEP 376
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
RIEHYG +VD+ R+G + EA++L+ +MP+ ND + G+LL CRIH + + +V +KL
Sbjct: 377 RIEHYGAVVDMLGRSGRLQEAYNLLTSMPIPSNDVIWGALLGACRIHGDVGMGERVIKKL 436
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
+ E+ P++ GY L+ ++Y AA R + +RQ M+ G RK PG SWV+
Sbjct: 437 L-ELKPDE-GGYYILLRDIYVAAGRTAEANEMRQAMLASGARKNPGCSWVE 485
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 138/342 (40%), Gaps = 74/342 (21%)
Query: 26 LLQIRNTTKTLFQ-IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTA 84
LL+ R+ T L IH + GF + ++ L+ Y G I+A KVFE
Sbjct: 113 LLKSRSFTMPLVHDIHGAVFKFGFCRHLHVQNALIHLYAVGGVTISARKVFEDAVRVGLD 172
Query: 85 I-----------------------------------WNQMIRGHARSETPEKSVYLYKQM 109
+ W M+ +++++ P +++ L+++M
Sbjct: 173 VDIVSWSGLLVAHAKAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEM 232
Query: 110 IDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGE 169
PDE T ++S CA G G VH V +G+ V + +L+++Y G+
Sbjct: 233 RLAGVWPDEVTVLSVISACAELGDAEMGRMVHKFVEENGFGWMVALCNSLIDMY----GK 288
Query: 170 CGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCA 229
CG ++ AW++FD +++++W M+ CA
Sbjct: 289 CGC------------------------------LEEAWQVFDRTKRKSLITWNAMMMVCA 318
Query: 230 QNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREP 289
+G + A LF M + V D V ++A L A A G + G + ++ ++ V EP
Sbjct: 319 NHGYAEDAFRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGV--EP 376
Query: 290 VLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMI 330
+ A++ M G ++EAY + M N V W +++
Sbjct: 377 -RIEHYGAVVDMLGRSGRLQEAYNLLTSMPIPSNDVIWGALL 417
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 179/539 (33%), Positives = 304/539 (56%), Gaps = 34/539 (6%)
Query: 24 FSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVT-------SGYLINAHKVFE 76
+LLQ ++ L IH ++ ++ ++LLA V + L A+ +F
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
+ +NP+ ++N +IR + P K+ Y QM+ PD T+ FL+ +
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLK 195
GEQ H +++ G+ ++V++ +L+++Y CG + A +F M R VVSW S++
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMY----ANCGFIAAAGRIFGQMGFRDVVSWTSMVA 191
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVA 255
GY K G ++ A ++FDEMPHRN+ +W+ MI+G A+N +A+ LF M+R V ++
Sbjct: 192 GYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETV 251
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
+V+ +S+CA +G L+ G+ + YV ++ V + L AL+ M+ CG+IE+A VF
Sbjct: 252 MVSVISSCAHLGALEFGERAYEYVVKS----HMTVNLILGTALVDMFWRCGDIEKAIHVF 307
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVD 360
+ +++SW+S+I G A G+A +A+ +TF VLSACSHGG V+
Sbjct: 308 EGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVE 367
Query: 361 EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
+G + +E M ++ GI+PR+EHYGC+VD+ RAG + EA + + M +KPN +LG+LL
Sbjct: 368 KGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGA 427
Query: 421 CRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRK 480
C+I+ N E+A +V L+ ++ PE +GY L++N+YA A +W + ++R M + V+K
Sbjct: 428 CKIYKNTEVAERVGNMLI-KVKPEH-SGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKK 485
Query: 481 PPGQSWVQINGVLHDFVAGDS-TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
PPG S ++I+G ++ F GD + + I + EI + GYK + + F ++E
Sbjct: 486 PPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDE 544
>gi|356568696|ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 198/597 (33%), Positives = 313/597 (52%), Gaps = 87/597 (14%)
Query: 14 SSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHK 73
S + L ++ L + N ++ QIH+Q++ Q ++ KL+A + +L +A
Sbjct: 16 SRRRLLEEKLCDLHKCTNL-DSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVN 74
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVY-LYKQMIDKETEPDEYTYSFLLSVCARCG 132
VF +P+ ++N +IR HA + + + + QM PD +TY FLL C+
Sbjct: 75 VFNHVPHPNVHLYNSIIRAHAHNSSHRSLPFNAFFQMQKNGLFPDNFTYPFLLKACSGPS 134
Query: 133 LFREGEQVHGRVLASGYCSNVFIRTNL---------------MNLYL------------M 165
+H V G+ ++F+ +L M+L+L M
Sbjct: 135 SLPLVRMIHAHVEKIGFYGDIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEERDVVTWNSM 194
Query: 166 SGG--ECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWT 222
GG CG + A LFD+MP R +VSWN++L GY K G++D A+++F+ MP RN+VSW+
Sbjct: 195 IGGLVRCGELQGACKLFDEMPDRDMVSWNTMLDGYAKAGEMDTAFELFERMPWRNIVSWS 254
Query: 223 TM-------------------------------ISGCAQNGKSRQALSLFNEMRRARVGL 251
TM I+G A+ G +R+A L+ +M A +
Sbjct: 255 TMVCGYSKGGDMDMARMLFDRCPVKNVVLWTTIIAGYAEKGLAREATELYGKMEEAGMRP 314
Query: 252 DQVALVAALSACAEIGDLKLGKWIHSYVEE-NFSVGREPVLVSLNNALIHMYASCGEIEE 310
D L++ L+ACAE G L LGK IH+ + F G + + NA I MYA CG ++
Sbjct: 315 DDGFLLSILAACAESGMLGLGKRIHASMRRWRFRCGAKVL-----NAFIDMYAKCGCLDA 369
Query: 311 AYGVFRKMQ-RRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACS 354
A+ VF M +++ VSW SMI GFA G+ ++AL TF+G+L AC+
Sbjct: 370 AFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSWMVQEGFEPDTYTFVGLLCACT 429
Query: 355 HGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL 414
H G V+EGR++F M + +GI P++EHYGCM+DL R G + EAF L+++MPM+PN +L
Sbjct: 430 HAGLVNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFMLLRSMPMEPNAIIL 489
Query: 415 GSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMI 474
G+LL CR+HN+ +LA V ++L +++P Y +L++N+YA A W +VA VR +M
Sbjct: 490 GTLLNACRMHNDVDLARAVCEQLF-KLEPSDPGNY-SLLSNIYAQAGDWMNVANVRLQMK 547
Query: 475 KMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISE 531
G KP G S +++ +H+F D ++ ++ IY+ + + Q GY P I +
Sbjct: 548 NTGGEKPSGASSIEVEEEVHEFTVFDQSHPKSDDIYQMIDRLVQDLRQVGYVPMIHQ 604
>gi|222631730|gb|EEE63862.1| hypothetical protein OsJ_18686 [Oryza sativa Japonica Group]
Length = 551
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 175/503 (34%), Positives = 286/503 (56%), Gaps = 36/503 (7%)
Query: 23 IFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPS 82
+ + L+ T + L ++H ++ SQ +Y+ +++ + +A +VF + +P+
Sbjct: 17 VMARLRACVTFRDLLRVHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQVRDPN 76
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEP-------DEYTYSFLLSVCARCGLFR 135
+ N MI+ +A++ +V +Y +M+ T P D +TY FLL C
Sbjct: 77 LHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAALE 136
Query: 136 EGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLK 195
G+QVH V+ SG S+ ++ +L+ +Y +G + A +FD+M R VVSWN L+
Sbjct: 137 LGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGD---LALAHKVFDEMRERDVVSWNMLIS 193
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVA 255
+ + G + A +F+ MP + +V+WT M+SG G A+ F M+ D V+
Sbjct: 194 AHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVS 253
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN--NALIHMYASCGEIEEAYG 313
+VA L ACA++G L+LG+WI++Y + R +L S + NAL+ MYA CG I++A
Sbjct: 254 IVAVLPACAQLGTLELGRWIYAYCK------RHGMLTSTHICNALMEMYAKCGCIDQALQ 307
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGG 357
+F M ++ +SW+++I G A G A EA+ +TF+G+LSACS+ G
Sbjct: 308 LFDGMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAG 367
Query: 358 FVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSL 417
VDEG F+ MN +G++P +EHYGC+VDL R+G + A LV++MP+ + V GSL
Sbjct: 368 LVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSL 427
Query: 418 LLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMG 477
L CR H + + A A++LV E++P+ G L ++ANVYAAA+RW DVA+ R+ +
Sbjct: 428 LSACRSHGDVDTAVLAAERLV-ELEPDD-VGNLVMLANVYAAARRWSDVASTRKAIRSRS 485
Query: 478 VRKPPGQSWVQINGVLHDFVAGD 500
+RK PG S +++ V+ +FVAG+
Sbjct: 486 MRKTPGCSLIEVGNVVREFVAGE 508
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 189/606 (31%), Positives = 306/606 (50%), Gaps = 84/606 (13%)
Query: 6 IIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS 65
++ NP + + + +LL+ + L QI +QI+ +G +++ +
Sbjct: 1 MVVLNPV---QRIVEEKFITLLRSCKNYERLHQIQAQIVTHGLEHNDFVAPNFITTCSRF 57
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
+ +A K+F+K P+TA WN M RG+ ++ +V L+ ++ P+ +T+ ++
Sbjct: 58 KRIHHARKLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMII 117
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTN--------------------------- 158
C + REGE+VH G+ SN F+ T+
Sbjct: 118 KSCGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVV 177
Query: 159 ----LMNLYLMSGGEC----------------------------GVGCARLLFDDMPARS 186
++N Y++ G + AR LFD MP R
Sbjct: 178 VWTAIINGYILCGDVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKMPNRD 237
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR- 245
+SWN++L GY G+++ K+FDEMP RNV SW +I G +NG + L F M
Sbjct: 238 TMSWNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLV 297
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC 305
V + LVA LSAC+ +G L +GKW+H Y E S+G + L + N LI MYA C
Sbjct: 298 EGHVIPNDFTLVAVLSACSRLGALDMGKWVHVYAE---SIGYKGNLF-VGNVLIDMYAKC 353
Query: 306 GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVL 350
G IE A VF + R++ +SW ++I G A G+A +AL +TF+G+L
Sbjct: 354 GVIENAVVVFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGIL 413
Query: 351 SACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPN 410
SAC+H G V +G +F+ M ++ I P+IEHYGCMVDL RAGL+D+A + ++ MP++P+
Sbjct: 414 SACTHMGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPD 473
Query: 411 DAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVR 470
+ +LL CR++ N E+A Q+L+ E++P A ++ +V+N+Y R +DVA ++
Sbjct: 474 AVIWAALLGACRLYKNVEIAELALQRLI-ELEPNNPANFV-MVSNIYKDLGRSEDVARLK 531
Query: 471 QKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
M G RK PG S ++ N + +F + D + + IY+ L +TM GY P++S
Sbjct: 532 IAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHSETESIYRVLKGLTMLLRSHGYVPNLS 591
Query: 531 ELFLGI 536
++ G+
Sbjct: 592 DVAHGL 597
>gi|255581953|ref|XP_002531775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528611|gb|EEF30631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 170/491 (34%), Positives = 284/491 (57%), Gaps = 25/491 (5%)
Query: 38 QIHSQIIINGFSQKNYILAK-LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
Q+H+Q +++G + + + LL YVT + A +FE+ ++N MIRG
Sbjct: 6 QLHAQFVVSGLLNHHSLCGRRLLESYVTMSEISYARSIFERIPYLDVFVYNTMIRGLMLG 65
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
+ P S+ L+ +++ +PD YTY+F+L C+ EG+QVH +++ +G N I
Sbjct: 66 KRPYDSLLLFNELLLGCLKPDNYTYTFVLKACSNQKALPEGKQVHCQIIKAGISPNTHIH 125
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
++L+++Y SG C F + + ++ NS++ GY+ +G +D A +FD+M +
Sbjct: 126 SSLIHMYTSSGSIVEAECVLREFSE---ENTLAKNSMISGYLSKGHVDKARAMFDQMKAK 182
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
+V SW+ +I+GC +NG +AL+LF +M + ++ ALV+ LSACA +G L G+WIH
Sbjct: 183 DVASWSAIITGCTKNGMHTEALALFEDMMVSHTLPNESALVSLLSACAHLGALHQGRWIH 242
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+Y++ +G + + + L+ ALI MYA CG+I+ Y FRKM RR+ V+W ++I+GFA
Sbjct: 243 AYIDR---IGAD-MSIRLSTALIDMYAKCGDIQSGYKFFRKMPRRDIVTWGAIISGFAIY 298
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G A++ + F+ +LSACSH G+V+EG+ +F M + GI+P IEH
Sbjct: 299 GQAKKCFELFEEMLADGIYPNGVIFVAILSACSHAGYVEEGKLYFNQMMVDLGIRPSIEH 358
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YGCMVDL RAG + EA + +MP KPN + GS+L CR HN+ S + L+ E+
Sbjct: 359 YGCMVDLLGRAGRLKEAEEFIISMPEKPNSVIWGSMLSACRTHNDLNRGSWAFRHLI-EL 417
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+P Y L ++ A Q+ +R+ + G+ G S+++++G +H+F+ GD+
Sbjct: 418 EPRSGDRY-KLAGLMFGNAGEKQEATKIRKMIEDQGMETTSGSSFIEVDGTIHEFLVGDT 476
Query: 502 TYKQASLIYKT 512
+ +A+ IYK
Sbjct: 477 IHNEAAEIYKV 487
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 185/550 (33%), Positives = 293/550 (53%), Gaps = 60/550 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH + N + + +L KL Y++ ++ A ++F++ NPS +WNQ+IR +A +
Sbjct: 29 KIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNG 88
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+ ++ LY M+ P++YTY F+L C+ +G ++H G S+VF+ T
Sbjct: 89 PFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCT 148
Query: 158 NLMNLYLMSGGECGVGC-ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAW--------- 207
L++ Y +CG+ A+ LF M R VV+WN+++ G G D A
Sbjct: 149 ALVDFY----AKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEE 204
Query: 208 -----------------------KIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
KIFD M RN VSW+ MI G + ++AL +F M
Sbjct: 205 GICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMM 264
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLGKWIHSY-VEENFSVGREPVLVSLNNALIHMYA 303
+ + + D ++ L AC+ + L+ G H Y + F+ + NALI MY+
Sbjct: 265 QLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATD-----TLICNALIDMYS 319
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLG 348
CG+I A VF +M R + VSW +MI G+ G EAL +TF+
Sbjct: 320 KCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFIC 379
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
+LS+CSH G V EGR +F+ M++++ I PR+EH CMVD+ RAGL+DEA ++NMP +
Sbjct: 380 LLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFE 439
Query: 409 PNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAA 468
P+ + +LL CRIH N EL +V++K + + PE + G L++N+Y+AA RW D A
Sbjct: 440 PDVRIWSALLSACRIHKNIELGEEVSKK-IQSLGPE-STGNFVLLSNIYSAAGRWDDAAH 497
Query: 469 VRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
+R G++K PG SW++ING++H FV GD ++ Q S I + L E+ ++ + GY+ +
Sbjct: 498 IRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAE 557
Query: 529 ISELFLGIEE 538
S +F +EE
Sbjct: 558 CSFVFQDVEE 567
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 126/314 (40%), Gaps = 61/314 (19%)
Query: 120 TYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLF 179
Y LL C + E +++H L + ++ + L LYL V AR LF
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCN---QVVLARRLF 66
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
D++P SV+ WN +++ Y G DGA ++ M H V
Sbjct: 67 DEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRP------------------- 107
Query: 240 LFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
++ L AC+ + ++ G IHS+ + F + + V + AL+
Sbjct: 108 ------------NKYTYPFVLKACSGLLAIEDGVEIHSHAKM-FGLESD---VFVCTALV 151
Query: 300 HMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALL--------------- 344
YA CG + EA +F M R+ V+W +MI G + G +A+
Sbjct: 152 DFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSS 211
Query: 345 TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQN 404
T +GVL C + R+ F+ M G++ + + M+ + + M EA + +
Sbjct: 212 TIVGVLPTCQ---CLLYARKIFDVM----GVRNEVS-WSAMIGGYVASDCMKEALDIFRM 263
Query: 405 MPMKPNDAVLGSLL 418
M + D L ++L
Sbjct: 264 MQLSGIDPDLTTML 277
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
F H +I+ GF+ I L+ Y G + A +VF + + WN MI G+
Sbjct: 293 FCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIH 352
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+++ L+ ++ +PD+ T+ LLS C+ GL EG
Sbjct: 353 GLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEG 393
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 117/289 (40%), Gaps = 41/289 (14%)
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
L AC + L K IH + +N S VL + L +Y SC ++ A +F ++
Sbjct: 15 LEACIQSKSLTEAKKIHQHFLKNTSNADSSVL----HKLTRLYLSCNQVVLARRLFDEIP 70
Query: 320 RRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQ 364
+ + W +I +A G A+ T+ VL ACS +++G +
Sbjct: 71 NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
+ +G++ + +VD +++ G++ EA L +M + + +++ GC ++
Sbjct: 131 IHS-HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGCSLY 188
Query: 425 NNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQ 484
+ A Q+ ++ Q G + + Q + R+ MGVR
Sbjct: 189 GLCDDAVQLIMQM-------QEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEV-- 239
Query: 485 SWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELF 533
SW + G +VA D K+A I++ + G PD++ +
Sbjct: 240 SWSAMIG---GYVASDCM-KEALDIFRMM-------QLSGIDPDLTTML 277
>gi|297724167|ref|NP_001174447.1| Os05g0439300 [Oryza sativa Japonica Group]
gi|46981301|gb|AAT07619.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|215769333|dbj|BAH01562.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676403|dbj|BAH93175.1| Os05g0439300 [Oryza sativa Japonica Group]
Length = 551
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 175/503 (34%), Positives = 286/503 (56%), Gaps = 36/503 (7%)
Query: 23 IFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPS 82
+ + L+ T + L ++H ++ SQ +Y+ +++ + +A +VF + +P+
Sbjct: 17 VMARLRACVTFRDLLRVHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQVRDPN 76
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEP-------DEYTYSFLLSVCARCGLFR 135
+ N MI+ +A++ +V +Y +M+ T P D +TY FLL C
Sbjct: 77 LHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAALE 136
Query: 136 EGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLK 195
G+QVH V+ SG S+ ++ +L+ +Y +G + A +FD+M R VVSWN L+
Sbjct: 137 LGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGD---LALAHKVFDEMRERDVVSWNMLIS 193
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVA 255
+ + G + A +F+ MP + +V+WT M+SG G A+ F M+ D V+
Sbjct: 194 AHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVS 253
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN--NALIHMYASCGEIEEAYG 313
+VA L ACA++G L+LG+WI++Y + R +L S + NAL+ MYA CG I++A
Sbjct: 254 IVAVLPACAQLGALELGRWIYAYCK------RHGMLTSTHICNALMEMYAKCGCIDQALQ 307
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGG 357
+F M ++ +SW+++I G A G A EA+ +TF+G+LSACS+ G
Sbjct: 308 LFDGMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAG 367
Query: 358 FVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSL 417
VDEG F+ MN +G++P +EHYGC+VDL R+G + A LV++MP+ + V GSL
Sbjct: 368 LVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSL 427
Query: 418 LLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMG 477
L CR H + + A A++LV E++P+ G L ++ANVYAAA+RW DVA+ R+ +
Sbjct: 428 LSACRSHGDVDTAVLAAERLV-ELEPDD-VGNLVMLANVYAAARRWSDVASTRKAIRSRS 485
Query: 478 VRKPPGQSWVQINGVLHDFVAGD 500
+RK PG S +++ V+ +FVAG+
Sbjct: 486 MRKTPGCSLIEVGNVVREFVAGE 508
>gi|297734524|emb|CBI15771.3| unnamed protein product [Vitis vinifera]
Length = 436
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 172/442 (38%), Positives = 257/442 (58%), Gaps = 33/442 (7%)
Query: 109 MIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGG 168
M+ T PD Y++ F+L CAR L +G ++H L G +VF++ L++ +
Sbjct: 1 MLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAF----S 56
Query: 169 ECG-VGCARLLFDDMPA--RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMI 225
CG V AR +FD +PA R VVSWNS++ GY++ + A K+FD +PHRN V WT+MI
Sbjct: 57 SCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFDRIPHRNTVCWTSMI 116
Query: 226 SGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSV 285
+G AQ+ ++A+ LF EM+ D + LSAC G L G+WIH Y E N
Sbjct: 117 AGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERN--- 173
Query: 286 GREPVLVSLN--NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL 343
+ + LN NALI MY+ CG+I++A +F + + + SW+++I+G A G + +AL
Sbjct: 174 ---SIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKAL 230
Query: 344 ----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVD 387
+TFLGVL AC+HGGFVD+G +F M Q + + P IEHYGCMVD
Sbjct: 231 HLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVD 290
Query: 388 LFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAA 447
L RA L+ EA ++ +P++P+ + SLL CR H N ELA + A K + E++P +
Sbjct: 291 LLGRANLLVEAEKFIRTLPIQPDVVIWRSLLFACRNHGNIELA-EFAAKQIEELEPRR-C 348
Query: 448 GYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQAS 507
G L++NVYA+A RW DV VR+ M ++K PG S+V+I+G++H+ D ++ +
Sbjct: 349 GARVLLSNVYASASRWGDVKRVRKDMATQRIKKQPGCSFVEIDGLVHELFVADRSHPEMG 408
Query: 508 LIYKTLGEITMQAMQEGYKPDI 529
IY+T+ I +G+ P I
Sbjct: 409 AIYETMISINKALQSKGFDPGI 430
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 40/216 (18%)
Query: 63 VTSGYLIN-----AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
+ SGYL + A KVF++ + +T W MI G+A+S+ ++++ L+++M D
Sbjct: 84 MISGYLQSHRYELALKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAAD 143
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
T + +LS C G +G +H YC I
Sbjct: 144 AATIACVLSACGHWGALAQGRWIH------LYCERNSIEM-------------------- 177
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
D+ AR N+L+ Y K GDI A +IF + ++ SW+ +ISG A NG+S +A
Sbjct: 178 ---DLNAR-----NALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKA 229
Query: 238 LSLFNEMRR-ARVGLDQVALVAALSACAEIGDLKLG 272
L LF++M + + +++ + L AC G + G
Sbjct: 230 LHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKG 265
>gi|125552488|gb|EAY98197.1| hypothetical protein OsI_20110 [Oryza sativa Indica Group]
Length = 551
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 174/494 (35%), Positives = 282/494 (57%), Gaps = 36/494 (7%)
Query: 32 TTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIR 91
T + L ++H ++ SQ +Y+ +++ + +A +VF + +P+ + N MI+
Sbjct: 26 TFRDLLRVHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQVRDPNLHLHNAMIK 85
Query: 92 GHARSETPEKSVYLYKQMIDKETEP-------DEYTYSFLLSVCARCGLFREGEQVHGRV 144
+A++ +V +Y +M+ T P D +TY FLL C G+QVH V
Sbjct: 86 AYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAALELGKQVHTHV 145
Query: 145 LASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDID 204
+ SG S+ ++ +L+ +Y +G + A +FD+M R VVSWN L+ + + G +
Sbjct: 146 VRSGCDSSAIVQNSLIEMYTRAGD---LALAHKVFDEMRERDVVSWNMLISAHARLGQMR 202
Query: 205 GAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACA 264
A +F+ MP + +V+WT M+SG G A+ F M+ D V++VA L ACA
Sbjct: 203 KATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSIVAVLPACA 262
Query: 265 EIGDLKLGKWIHSYVEENFSVGREPVLVSLN--NALIHMYASCGEIEEAYGVFRKMQRRN 322
++G L+LG+WI++Y + R +L S + NAL+ MYA CG I++A +F M ++
Sbjct: 263 QLGALELGRWIYAYCK------RHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADKD 316
Query: 323 TVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFF 366
+SW+++I G A G A EA+ +TF+G+LSACS+ G VDEG F
Sbjct: 317 VISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLSHF 376
Query: 367 ECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNN 426
+ MN +G++P +EHYGC+VDL R+G + A LV++MP+ + V GSLL CR H +
Sbjct: 377 DRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSHGD 436
Query: 427 AELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSW 486
+ A A++LV E++P+ G L ++ANVYAAA+RW DVA+ R+ + +RK PG S
Sbjct: 437 VDTAVLAAERLV-ELEPDD-VGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPGCSL 494
Query: 487 VQINGVLHDFVAGD 500
+++ V+ +FVAG+
Sbjct: 495 IEVGNVVREFVAGE 508
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 175/516 (33%), Positives = 281/516 (54%), Gaps = 56/516 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH +II G+ + + LL+ Y G L++A VFE+ + WN MI + + E
Sbjct: 428 QIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHE 487
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+ +V ++ ++ + +PD T++ +L+VC G+ V ++ +G+ S++ IR
Sbjct: 488 KYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIR- 546
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
N+L+ +V GD+ A +F++MP R+
Sbjct: 547 ---------------------------------NALVSMFVNCGDLMSAMNLFNDMPERD 573
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+VSW T+I+G Q+G+++ A F M+ + V DQ+ L+ACA L G+ +H+
Sbjct: 574 LVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHA 633
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
+ E V + LI MY CG I++A+ VF + ++N SWTSMITG+A+ G
Sbjct: 634 LITE----AALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHG 689
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+EAL +TF+G LSAC+H G + EG FE M +++ I+PR+EHY
Sbjct: 690 RGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESM-KDFNIEPRMEHY 748
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
GCMVDLF RAGL+ EA + M +KP+ + G+LL C++H + ELA +VAQK + E+D
Sbjct: 749 GCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKL-ELD 807
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P Y+ L +N+YAAA W++V +R+ M+ GV K PGQSW++++G +H F + D T
Sbjct: 808 PNDDGVYVIL-SNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKT 866
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ Q I+ LG + M+ + GY PD + +E+
Sbjct: 867 HPQIEEIHAELGRLHMEMKKLGYVPDTRYVLHDVED 902
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 227/491 (46%), Gaps = 96/491 (19%)
Query: 21 RQIFS-LLQIRNTTKTLF---QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFE 76
RQ +S LLQ+ K L +IH+ I + ++ L++ Y G +A ++F+
Sbjct: 104 RQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFD 163
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
+ + WN ++ G+ + E++ L++QM+ +PD+YT+ ++L+ CA +
Sbjct: 164 EMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDK 223
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKG 196
G ++ +L +G+ +++F+ T L+N+++ GG
Sbjct: 224 GGELFSLILNAGWDTDLFVGTALINMHIKCGG---------------------------- 255
Query: 197 YVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVAL 256
+D A K+F+ +P R++++WT+MI+G A++ + +QA +LF M V D+VA
Sbjct: 256 ------VDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAF 309
Query: 257 VAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFR 316
V+ L AC L+ GK +H+ ++E VG + + + AL+ MY CG +E+A VF
Sbjct: 310 VSLLKACNHPEALEQGKRVHARMKE---VGLD-TEIYVGTALLSMYTKCGSMEDALEVFN 365
Query: 317 KMQRRNTVSWTSMITGFAKQGYAQEALL---------------TFLGVLSACSHGGFVDE 361
++ RN VSWT+MI GFA+ G +EA L TF+ +L ACS + +
Sbjct: 366 LVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQ 425
Query: 362 GRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGC 421
GRQ I RI G + D R L+ A GSL+
Sbjct: 426 GRQ----------IHDRIIKAGYITDDRVRTALLSMY-------------AKCGSLM--- 459
Query: 422 RIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKP 481
A+ + I + + A++ Y +++ + A Q ++K G+ KP
Sbjct: 460 -----------DARNVFERISKQNVVAWNAMIT-AYVQHEKYDNAVATFQALLKEGI-KP 506
Query: 482 PGQSWVQINGV 492
++ I V
Sbjct: 507 DSSTFTSILNV 517
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 211/455 (46%), Gaps = 61/455 (13%)
Query: 25 SLLQIRNTTKTLFQ---IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENP 81
SLL+ N + L Q +H+++ G + Y+ LL+ Y G + +A +VF +
Sbjct: 311 SLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGR 370
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVH 141
+ W MI G A+ E++ + +MI+ EP+ T+ +L C+R ++G Q+H
Sbjct: 371 NVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIH 430
Query: 142 GRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKR 200
R++ +GY ++ +RT L+++Y +CG + AR +F+ + ++VV+WN+++ YV
Sbjct: 431 DRIIKAGYITDDRVRTALLSMY----AKCGSLMDARNVFERISKQNVVAWNAMITAYV-- 484
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
Q+ K A++ F + + + D + L
Sbjct: 485 -----------------------------QHEKYDNAVATFQALLKEGIKPDSSTFTSIL 515
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
+ C L+LGKW+ S + G E L + NAL+ M+ +CG++ A +F M
Sbjct: 516 NVCKSPDALELGKWVQSLI---IRAGFESDL-HIRNALVSMFVNCGDLMSAMNLFNDMPE 571
Query: 321 RNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQF 365
R+ VSW ++I GF + G Q A +TF G+L+AC+ + EGR+
Sbjct: 572 RDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRL 631
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHN 425
+ + + + ++ ++++ G +D+A + N+P K N S++ G H
Sbjct: 632 HALITEA-ALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLP-KKNVYSWTSMITGYAQHG 689
Query: 426 NAELASQVAQKLVAE-IDPEQAAGYLALVANVYAA 459
+ A ++ ++ E + P+ AL A +A
Sbjct: 690 RGKEALELFCQMQQEGVKPDWITFVGALSACAHAG 724
>gi|224133278|ref|XP_002321528.1| predicted protein [Populus trichocarpa]
gi|222868524|gb|EEF05655.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 179/473 (37%), Positives = 269/473 (56%), Gaps = 59/473 (12%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKTENPSTAIWNQMIR 91
K L QIH+++I GF Q +++ K++ F + G + A VFEK +P I+N MIR
Sbjct: 2 KDLKQIHARVIQLGFEQNRFVVGKVIVFCAAAEHGDMNYAVSVFEKIGDPDAFIFNTMIR 61
Query: 92 GHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCS 151
G ++ P K+ YK+M ++ D +T+SFLL VC + GL G +H L G S
Sbjct: 62 GFGKANDPRKAFDYYKRMQERGLVSDSFTFSFLLKVCGQLGLVLLGRLMHCSTLKRGLNS 121
Query: 152 NVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFD 211
+VF+R L+++Y G K DI+ + ++F+
Sbjct: 122 HVFVRNTLVHMY--------------------------------GTFK--DIEASRQLFE 147
Query: 212 EMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKL 271
E+P+ +V+W +I GK +AL +F+ M + + D+ V LSAC+ +G L
Sbjct: 148 EIPNPELVAWNIIIDCHVSCGKFNEALEMFSRMLKFGIEPDEATFVVILSACSALGALDF 207
Query: 272 GKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMIT 331
G+W+HS + N G + +NN+L+ MYA CG ++EA+ +F M ++NTV+W +MI
Sbjct: 208 GRWVHSCIS-NIGHG---CITEVNNSLLDMYAKCGALQEAFEIFNGMNKKNTVTWNTMIL 263
Query: 332 GFAKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGI 375
G A GYA EAL +TFL VLSACSHGG VD+G +FF+ M + + I
Sbjct: 264 GLASHGYANEALALFSNMLEQKLWAPDDITFLVVLSACSHGGMVDKGWRFFDIMKKEYHI 323
Query: 376 KPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQ 435
+P I+HYGCMVD+ RAG ++EA+ L+ NMPM+ N V +LL CR+H N EL QV +
Sbjct: 324 QPTIKHYGCMVDILGRAGFVEEAYRLISNMPMQCNAIVWRTLLAACRLHGNVELGKQVRK 383
Query: 436 KLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKP-PGQSWV 487
+L+ E++P+ ++ Y+ L+AN YA+A RW + VR+ M K GV+KP PG S V
Sbjct: 384 QLL-ELEPDHSSDYV-LLANTYASAGRWNEAMRVRKTMHKRGVQKPEPGNSVV 434
>gi|8778758|gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
Length = 695
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 195/560 (34%), Positives = 310/560 (55%), Gaps = 67/560 (11%)
Query: 2 LVEEIIPANPATSSKALTTRQ-IFSLLQIRNTTKTLFQIHSQIIINGFSQKN---YILAK 57
LV IP SS A Q IFSL + + L Q+H+ + + ++ ++ K
Sbjct: 86 LVFSRIPNLKYGSSTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGK 145
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET-PEKSVYLYKQMIDK-ETE 115
+L + + A +VF+ EN S+ +WN +IR A + E++ LY++M+++ E+
Sbjct: 146 ILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESS 205
Query: 116 PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGC 174
PD++T+ F+L CA F EG+QVH +++ G+ +V++ L++LY G CG +
Sbjct: 206 PDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLY----GSCGCLDL 261
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
AR +FD+MP RS+VSWNS++ V+ G+ D
Sbjct: 262 ARKVFDEMPERSLVSWNSMIDALVRFGEYDS----------------------------- 292
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
AL LF EM+R+ D + + LSACA +G L LG W H+++ V + V +
Sbjct: 293 --ALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVD-VAMDVLV 348
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------- 343
N+LI MY CG + A VF+ MQ+R+ SW +MI GFA G A+EA+
Sbjct: 349 KNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRE 408
Query: 344 ------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDE 397
+TF+G+L AC+H GFV++GRQ+F+ M +++ I+P +EHYGC+VDL +RAG + E
Sbjct: 409 NVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITE 468
Query: 398 AFSLVQNMPMKPNDAVLGSLLLG-CRIHNNAELASQVAQKLVAEIDPEQA-----AGYLA 451
A +V +MPMKP+ + SLL C+ + EL+ ++A+ ++ + ++ +G
Sbjct: 469 AIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYV 528
Query: 452 LVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYK 511
L++ VYA+A RW DV VR+ M + G+RK PG S ++ING+ H+F AGD+++ Q IY+
Sbjct: 529 LLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQ 588
Query: 512 TLGEITMQAMQEGYKPDISE 531
L I + GY PD S+
Sbjct: 589 QLKVIDDRLRSIGYLPDRSQ 608
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 177/517 (34%), Positives = 277/517 (53%), Gaps = 55/517 (10%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
+IHS ++ G+ ++ LL+ YV +A KVF+ + + W +I G+ S
Sbjct: 134 LKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISS 193
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
+++ +K++++ +PD ++ +L+ CAR G GE + + SG NVF+
Sbjct: 194 GHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVA 253
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
T SLL YVK G+++ A IF MP +
Sbjct: 254 T----------------------------------SLLDMYVKCGNLERANLIFSAMPEK 279
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
++VSW+TMI G A NG +QAL LF +M+ + D +V LSACA +G L LG W
Sbjct: 280 DIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWAS 339
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
S ++ N PVL ALI MY+ CG + +A+ +F M+R++ V W +M+ G +
Sbjct: 340 SLMDRN-EFLSNPVL---GTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMN 395
Query: 337 GYAQEALL---------------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G+A+ TF+G+L C+HGGFV+EGRQFF M + + + P IEH
Sbjct: 396 GHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEH 455
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YGCMVDL RAGL++EA L+ NMPMKPN V G+LL GC++H + LA QV +KL+ E+
Sbjct: 456 YGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLI-EL 514
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+P + Y+ L +N+Y+ RW++ +R M + ++K SW++I+G++H+F+ GD
Sbjct: 515 EPWNSGNYVQL-SNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDK 573
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++ + IY L E+ + G+ P + IEE
Sbjct: 574 SHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEE 610
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 212/437 (48%), Gaps = 60/437 (13%)
Query: 8 PANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY 67
P +P S KAL + S N L IH++++ Q NY+L +L + G
Sbjct: 7 PTSPVFS-KALEIKNYLS--NGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGS 63
Query: 68 LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSV 127
+ VF + + P+ +WN MIRG + + +++LY M P+ +T F+L
Sbjct: 64 TNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKA 123
Query: 128 CARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGEC-GVGCARLLFDDMPARS 186
CAR R G ++H ++ +GY +VF++T+L++LY+ +C A +FDD+P ++
Sbjct: 124 CARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYV----KCDNFDDALKVFDDIPDKN 179
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
VVSW +++ GY+ G R+A+ F ++
Sbjct: 180 VVSWTAIITGYISSGHF-------------------------------REAIGAFKKLLE 208
Query: 247 ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCG 306
+ D +LV L+ACA +GD G+WI Y+ ++ +GR V + +L+ MY CG
Sbjct: 209 MGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDS-GMGRN---VFVATSLLDMYVKCG 264
Query: 307 EIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLS 351
+E A +F M ++ VSW++MI G+A G Q+AL T +GVLS
Sbjct: 265 NLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLS 324
Query: 352 ACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPND 411
AC+ G +D G M++N + + ++D++S+ G + +A+ + M K +
Sbjct: 325 ACATLGALDLGIWASSLMDRNEFLSNPVLGTA-LIDMYSKCGSVTQAWEIFTAMKRK-DR 382
Query: 412 AVLGSLLLGCRIHNNAE 428
V ++++G ++ +A+
Sbjct: 383 VVWNAMMVGLSMNGHAK 399
>gi|449479818|ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 512
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 176/498 (35%), Positives = 282/498 (56%), Gaps = 30/498 (6%)
Query: 36 LFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHAR 95
L QIH+ + NG +++ KLL L A +F++ PS ++N+ I+ +
Sbjct: 4 LKQIHAYSLRNGLDHTKFLIEKLLQL----PDLPYACTLFDQIPKPSVYLYNKFIQTFSS 59
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
P + LY QM + P++Y+++FL CA G+ +H SG+ S++F
Sbjct: 60 IGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFASDMFA 119
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
T L+++Y G + AR LFD+MP R + +WNSL+ GY + G ++ A ++F++MP
Sbjct: 120 MTALLDMYAKLGM---LRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFNKMPV 176
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR-VGLDQVALVAALSACAEIGDLKLGKW 274
RNV+SWT +ISG AQNGK +AL +F + + ++V++ + L AC+++G L +GK
Sbjct: 177 RNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDIGKR 236
Query: 275 IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGF 333
I +Y N V +NA++ ++A CG IEEA VF ++ +RN SW +MI G
Sbjct: 237 IEAYARNNGFFKNAYV----SNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGL 292
Query: 334 AKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
A G +AL +TF+G+L AC+HGG V EGRQ FE M + + P+
Sbjct: 293 AVHGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESMESKFQVAPK 352
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
+EHYGC+VDL RAG + EA++L+QNMPM P+ + G+LL C H N EL A+ L
Sbjct: 353 LEHYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVELGEVAAESLF 412
Query: 439 AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVA 498
+++P Y+ +++N+YA A W VA +R+ M + K G S++++ +H+F+
Sbjct: 413 -KLEPWNPGNYV-ILSNIYALAGDWSGVARLRKMMKGGHITKRAGYSYIEVGDGIHEFIV 470
Query: 499 GDSTYKQASLIYKTLGEI 516
D ++ ++ IY L +I
Sbjct: 471 EDRSHLKSGEIYALLHKI 488
>gi|147818273|emb|CAN64718.1| hypothetical protein VITISV_026719 [Vitis vinifera]
Length = 499
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 170/498 (34%), Positives = 284/498 (57%), Gaps = 24/498 (4%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGY-LINAHKVFEKTENPSTAIWNQMIRGHARS 96
++H+ +I +G Q+ L KL+ Y +S L +A +F+ +PST ++N M R +A S
Sbjct: 6 RLHAHLITSGLHQQENHLRKLITLYTSSSSSLHHARLLFDAVYHPSTYLYNTMFRVYAAS 65
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
TP ++ L++ M PD YT+ FLL C+ +G+++H + L G +VF+
Sbjct: 66 PTPLHALLLHRHMFRHGPPPDTYTFPFLLKACSALAHLLKGQELHCQALKFGLGGHVFVE 125
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
+L++LY G + AR +FD M R + SW +LL Y ++ A K+FDEMP R
Sbjct: 126 NSLIHLY---GSNSRMDSARRVFDGMGYRDIASWTTLLACYANSCSVEAARKVFDEMPER 182
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
+VVS++ M++ + + R+AL LF E+ ++ +++ L ACA +G L +G+W++
Sbjct: 183 SVVSYSAMLAAYVRGNRFREALELFRELFSVKIEPSDSCVMSVLCACANLGALDVGRWVY 242
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
S+V + + V + ALI M+ CG IE A VF + ++ WT+M++G A
Sbjct: 243 SFVCHSKG---DYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLSGLAMH 299
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G ++ + +TF+ +LS CSH G V+EG +F+ M ++G++P +EH
Sbjct: 300 GLGEQLIEAFEKMVDSGIKPDEVTFVALLSGCSHSGLVNEGLYYFDRMESDFGVEPTVEH 359
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
+GC+VDL RAGL+D+A L+ MP +PN A+ G+LL CR++ N E+ AQ L+ +
Sbjct: 360 FGCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGALLNACRVYKNVEVGELAAQWLIKD- 418
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+P A Y+ L++ +Y A RW +V V+ KM ++G RK PG S +++ G+ ++FV GD
Sbjct: 419 EPWNGALYMTLLS-LYREAGRWDEVEKVKLKMKEVGCRKGPGCSLIEVGGICYEFVVGDK 477
Query: 502 TYKQASLIYKTLGEITMQ 519
++ A I L + M+
Sbjct: 478 SHPCAVEICLNLSKANME 495
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 172/497 (34%), Positives = 287/497 (57%), Gaps = 39/497 (7%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+I ++ GF ++ ++ V+ G L A K+F+K+ WN MI G+ R
Sbjct: 100 EILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRG 159
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ Y++M + +PDE T ++S CA+ G + H + +G V +
Sbjct: 160 WAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLAN 219
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
LM++Y+ G + AR LFD M +++VSW ++L FDEMP ++
Sbjct: 220 ALMDMYMKCGN---LESARKLFDSMTNKTMVSWTTML---------------FDEMPDKD 261
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VV W MI G + ++AL+LFNEM+ + D+V +V+ LSAC+++G L +G WIH
Sbjct: 262 VVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHH 321
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y+E++ + V+L ALI MYA CG+I +A VF+++ RN+++WT++I+G A G
Sbjct: 322 YIEKH----ELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHG 377
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
A A+ +TFLG+LSAC HGG V+EGR++F M+ + + P+++HY
Sbjct: 378 NAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHY 437
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
CMVDL RAGL++EA L+++MP++ + V G+L CRIH N + + A KL+ ++D
Sbjct: 438 SCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLL-QMD 496
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P + Y+ L+AN+Y A+ W++ R+ M + GV K PG S +++NG++++F+ D +
Sbjct: 497 PHDSGIYV-LLANMYGEAEMWKEAGKXRKLMRQRGVEKTPGCSSIEVNGIVYEFIVRDKS 555
Query: 503 YKQASLIYKTLGEITMQ 519
+ Q+ IY+ L ++T Q
Sbjct: 556 HPQSEQIYECLIQLTRQ 572
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 199/419 (47%), Gaps = 74/419 (17%)
Query: 43 IIINGFSQKNYILAKLLAFYVTSGY--LINAHKVFEKTENPSTAIWNQMIRGHARSETPE 100
+++ G + + ++L+AF S + L + T NP+T WN IRG SE P
Sbjct: 1 MVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPR 60
Query: 101 KSVYLYKQMIDKE-TEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
++V LYK+++ + T+PD YTY L CAR L R G ++ G VL G+ S++F+ +
Sbjct: 61 EAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAV 120
Query: 160 MNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVV 219
++L + G G AR +FD R +VSWNS++ GYV+RG W
Sbjct: 121 IHLLVSCGDLDG---ARKMFDKSCVRDLVSWNSMINGYVRRG-----W------------ 160
Query: 220 SWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV 279
+ +AL+ + EM+ + D+V ++ +S+CA++ DL LG+ H Y+
Sbjct: 161 --------------AYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYI 206
Query: 280 EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTS----------- 328
EEN + V L NAL+ MY CG +E A +F M + VSWT+
Sbjct: 207 EEN----GLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDV 262
Query: 329 -----MITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFEC 368
MI G+ +EAL +T + LSACS G +D G
Sbjct: 263 VPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHY 322
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNA 427
+ ++ + + ++D++++ G + +A + Q +P + N +++ G +H NA
Sbjct: 323 IEKH-ELSLNVALGTALIDMYAKCGKITKAIQVFQELPGR-NSLTWTAIISGLALHGNA 379
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 173/471 (36%), Positives = 272/471 (57%), Gaps = 52/471 (11%)
Query: 109 MIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSG- 167
M+ + P +T+S L+ C+ GE VHG + G+ S+VF++T L++ Y +G
Sbjct: 1 MVQAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGK 60
Query: 168 --------------------------GECG-VGCARLLFDDMPARSVVSWNSLLKGYVKR 200
G + AR LFD+MP R+ SWN+++ GY +
Sbjct: 61 IVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSRL 120
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
+++ A +F +MP+R+++SWTTMI+ +QN + R+AL++FNEM+ + D+V + +
Sbjct: 121 RNVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATII 180
Query: 261 SACAEIGDLKLGKWIHSY-VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
SACA +G L LGK IH Y +E F + V + +ALI MYA CG ++++ VF K++
Sbjct: 181 SACAHLGALDLGKEIHLYAMEMGFDLD-----VYIGSALIDMYAKCGSLDKSLVVFFKLR 235
Query: 320 RRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQ 364
++N W S+I G A GYA+EAL +TF+ VL AC+H G V+EGR+
Sbjct: 236 KKNLFCWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRK 295
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
F M++++ I P IEHYGCMVDL +AGL+++A LV++M M+PN + G+LL GC++H
Sbjct: 296 RFLSMSRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCKLH 355
Query: 425 NNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRK-PPG 483
N ++A QVA ++P +GY L+ N+YA RW +VA +R M ++GV K PG
Sbjct: 356 RNLKIA-QVAVNESKVLEPNN-SGYYTLLVNMYAEVNRWSEVANIRATMKELGVEKTSPG 413
Query: 484 QSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFL 534
SW++++ +H F A D ++ + IY L E+ Q GY P++ + L
Sbjct: 414 SSWIEMDRKIHQFAASDKSHLASDEIYTLLVELDGQLKLSGYVPELGSVPL 464
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 144/316 (45%), Gaps = 60/316 (18%)
Query: 19 TTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQ-KNYILAKLLAFYVTSGYLINAHKVFEK 77
+ RQ+F + +RNT +I+G+S+ +N A+LL F +
Sbjct: 94 SARQLFDEMPVRNTASW------NAMIDGYSRLRNVESAELL---------------FSQ 132
Query: 78 TENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
N W MI +++++ +++ ++ +M +PDE T + ++S CA G G
Sbjct: 133 MPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATIISACAHLGALDLG 192
Query: 138 EQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGY 197
+++H + G+ +V+I + L+++Y +CG
Sbjct: 193 KEIHLYAMEMGFDLDVYIGSALIDMY----AKCG-------------------------- 222
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
+D + +F ++ +N+ W ++I G A +G + +AL++F+ M+R ++ + V +
Sbjct: 223 ----SLDKSLVVFFKLRKKNLFCWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFI 278
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
+ L AC G ++ G+ + +FS+ P + ++ + G +E+A + R
Sbjct: 279 SVLGACTHAGLVEEGRKRFLSMSRDFSI---PPEIEHYGCMVDLLGKAGLLEDALELVRS 335
Query: 318 MQRR-NTVSWTSMITG 332
M+ N+V W +++ G
Sbjct: 336 MRMEPNSVIWGALLGG 351
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 178/504 (35%), Positives = 275/504 (54%), Gaps = 30/504 (5%)
Query: 53 YILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDK 112
++ + Y + G + A VF++ + WN MI + R +++ L+++M D
Sbjct: 147 FVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDS 206
Query: 113 ETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV 172
PDE ++S C R G R ++ ++ + + + T L+ +Y G
Sbjct: 207 NVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMY------AGA 260
Query: 173 GC---ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCA 229
GC AR F M R++ +++ GY K G +D A IFD+ +++V WTTMIS
Sbjct: 261 GCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYV 320
Query: 230 QNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREP 289
++ ++AL +F EM + + D V++ + +SACA +G L KW+HS + N G E
Sbjct: 321 ESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVN---GLES 377
Query: 290 VLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------ 343
L S+NNALI+MYA CG ++ VF KM RRN VSW+SMI + G A +AL
Sbjct: 378 EL-SINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARM 436
Query: 344 ---------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGL 394
+TF+GVL CSH G V+EG++ F M + I P++EHYGCMVDLF RA L
Sbjct: 437 KQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANL 496
Query: 395 MDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVA 454
+ EA ++++MP+ N + GSL+ CRIH EL + A K + E++P+ G L L++
Sbjct: 497 LREALEVIESMPVASNVVIWGSLMSACRIHGELELG-KFAAKRILELEPDH-DGALVLMS 554
Query: 455 NVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLG 514
N+YA +RW+DV +R+ M + V K G S + NG H+F+ GD +KQ++ IY L
Sbjct: 555 NIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLD 614
Query: 515 EITMQAMQEGYKPDISELFLGIEE 538
E+ + GY PD + + +EE
Sbjct: 615 EVVSKLKLAGYVPDCGSVLVDVEE 638
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 214/460 (46%), Gaps = 41/460 (8%)
Query: 11 PATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLIN 70
P S+ A T + S + N K Q+H+ I+ + K L+ +S L
Sbjct: 6 PIASTAANTILEKLSFCKSLNHIK---QLHAHILRTVINHKLNSFLFNLSVSSSSINLSY 62
Query: 71 AHKVFEKTENPSTAI-WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
A VF +P +I +N +R +RS P ++ Y+++ D++++ +L +
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 130 RCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVV 188
+ EG ++HG + F+ T M++Y CG + AR +FD+M R VV
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMY----ASCGRINYARNVFDEMSHRDVV 178
Query: 189 SWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVS----WTTMISGCAQNGKSRQALSLFNEM 244
+WN++++ Y + G +D A+K+F+EM NV+ ++S C + G R +++ +
Sbjct: 179 TWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFL 238
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLGK-WIHSYVEENFSVGREPVLVSLNNALIHMYA 303
V +D L A ++ A G + + + + N V + A++ Y+
Sbjct: 239 IENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFV---------STAMVSGYS 289
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF---------------LG 348
CG +++A +F + ++++ V WT+MI+ + + Y QEAL F
Sbjct: 290 KCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFS 349
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
V+SAC++ G +D+ + C++ N G++ + +++++++ G +D + + MP +
Sbjct: 350 VISACANLGILDKAKWVHSCIHVN-GLESELSINNALINMYAKCGGLDATRDVFEKMPRR 408
Query: 409 PNDAVLGSLLLGCRIHNNAELASQVAQKLVAE-IDPEQAA 447
N S++ +H A A + ++ E ++P +
Sbjct: 409 -NVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVT 447
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 178/527 (33%), Positives = 291/527 (55%), Gaps = 27/527 (5%)
Query: 30 RNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQM 89
R + ++HSQII GF + + + LL Y G + A ++F++ N W +
Sbjct: 16 RQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASI 75
Query: 90 IRGHARSETPEKSVYLYKQMIDKE-TEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASG 148
+ H ++ P +++ + M + +PD + ++ ++ C+ G R G+QVH R + S
Sbjct: 76 LTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSX 135
Query: 149 YCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWK 208
+C + ++++L+++Y G AR +FD + ++ VSW S++ GY + G A
Sbjct: 136 FCDDEVVKSSLIDMYTKCGQP---DEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMD 192
Query: 209 IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL-DQVALVAALSACAEIG 267
+F + P RN+ SWT +ISG Q+G + SLFNEMRR + + D + L + + CA +
Sbjct: 193 LFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLA 252
Query: 268 DLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
L+LGK IH V ++G E L ++NAL+ MYA C +I A +F +M R++ +SWT
Sbjct: 253 LLELGKQIHGLV---IALGFESCLF-ISNALVDMYAKCSDILAAKDIFYRMPRKDVISWT 308
Query: 328 SMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQN 372
S+I G A+ G A+EAL +TF+G+L ACSH G V GR+ F M +
Sbjct: 309 SIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTD 368
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQ 432
+ I P ++HY C++DL SR+G +DEA +L+ +P KP++ SLL C HNN E+ +
Sbjct: 369 YSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVR 428
Query: 433 VAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGV 492
+A + V ++ PE + Y+ L++NVYA A+ W V+ VR+ M M VRK PG S +
Sbjct: 429 IADR-VLDLKPEDPSTYI-LLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKD 486
Query: 493 LHDFVAGDST-YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
F AG+S + + I L ++ + + GY P+ S + IE+
Sbjct: 487 SQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQ 533
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 39/224 (17%)
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMP 183
L +CAR ++H +++ +G+ + + L+++Y G+CG + A LFD+MP
Sbjct: 10 LQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVY----GKCGLIPQALQLFDEMP 65
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
R VSW S+L + K +P R + TM + +G
Sbjct: 66 NRDHVSWASILTAHNKA-----------LIPRRTLSMLNTMFT---HDG----------- 100
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
+ D + AC+ +G L+LGK +H+ + E V ++LI MY
Sbjct: 101 -----LQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVV----KSSLIDMYT 151
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFL 347
CG+ +EA VF + +N+VSWTSMI+G+A+ G EA+ FL
Sbjct: 152 KCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFL 195
>gi|449492842|ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05750, chloroplastic-like [Cucumis sativus]
Length = 525
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 182/491 (37%), Positives = 285/491 (58%), Gaps = 36/491 (7%)
Query: 72 HKVFEKTENPSTA----IWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSV 127
H+ NP++ +W + + R+ ++ + +M EP+ T+ LLS
Sbjct: 42 HRNISSKFNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSA 101
Query: 128 CAR--CGLFREGEQVHGRVLASGY-CSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMP 183
CA F +HG G +V + T L+++Y +C +G AR +F ++
Sbjct: 102 CADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMY----SKCAQLGHARKVFYNLG 157
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
++ VSWN++L G+++ G+I+ A ++FDEMP R+ +SWT +I+G ++G S QAL F++
Sbjct: 158 VKNSVSWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQ 217
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV-EENFSVGREPVLVSLNNALIHMY 302
M+R+ V D V+++A L+ACA++G L LG W+H +V + F + ++N+LI MY
Sbjct: 218 MQRSGVAADYVSIIAVLAACADLGALTLGLWVHRFVMPQEFKDN-----IKISNSLIDMY 272
Query: 303 ASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFL 347
+ CG IE A VF KM +R VSW S+I GFA G+A E+L +++
Sbjct: 273 SRCGCIEFARQVFVKMAKRTLVSWNSIIVGFAVNGFADESLEFFXAMQKEGFKPDGVSYT 332
Query: 348 GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM 407
G L+ACSH G V++G + F+ M I PRIEHYGC+VDL+ RAG +++A ++++ MPM
Sbjct: 333 GALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPM 392
Query: 408 KPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVA 467
KPN+ VLGSLL CR H + LA ++ + L ++DPE A Y L++N+YAA +W
Sbjct: 393 KPNEVVLGSLLAACRTHGDVNLAERLMKHLF-KLDPEGDA-YYVLLSNIYAAIGKWDGAN 450
Query: 468 AVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
VR+ M GV+K PG S V+I+G +H+FVAGD+ + A IY L + + GY P
Sbjct: 451 NVRRTMKARGVQKKPGYSSVEIDGKVHEFVAGDNYHADADNIYSMLDLLCHELKVCGYVP 510
Query: 528 DISELFLGIEE 538
S+ L +E
Sbjct: 511 G-SDTILNTKE 520
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 131/333 (39%), Gaps = 78/333 (23%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKE---- 113
L+ Y L +A KVF ++ WN M+ G R+ E ++ L+ +M ++
Sbjct: 136 LIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELAIQLFDEMPTRDAISW 195
Query: 114 ---------------------------TEPDEYTYSFLLSVCARCGLFREGEQVHGRVLA 146
D + +L+ CA G G VH V+
Sbjct: 196 TALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADLGALTLGLWVHRFVMP 255
Query: 147 SGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDG 205
+ N+ I +L+++Y CG + AR +F M R++VSWNS++ G+ G D
Sbjct: 256 QEFKDNIKISNSLIDMY----SRCGCIEFARQVFVKMAKRTLVSWNSIIVGFAVNGFADE 311
Query: 206 AWKIFDEMPHRNV----VSWTTMISGCAQNGKSRQALSLFNEMRR--------------- 246
+ + F M VS+T ++ C+ G + L LF+ M+
Sbjct: 312 SLEFFXAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCIV 371
Query: 247 ---ARVGL---------------DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGRE 288
R G ++V L + L+AC GD+ L + + ++ + G +
Sbjct: 372 DLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKHLFKLDPEG-D 430
Query: 289 PVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR 321
V L+N +YA+ G+ + A V R M+ R
Sbjct: 431 AYYVLLSN----IYAAIGKWDGANNVRRTMKAR 459
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 41/212 (19%), Positives = 81/212 (38%), Gaps = 44/212 (20%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H ++ F I L+ Y G + A +VF K + WN +I G A +
Sbjct: 249 VHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSIIVGFAVNGF 308
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
++S+ + M + +PD +Y+ L+ C+ GL +G +
Sbjct: 309 ADESLEFFXAMQKEGFKPDGVSYTGALTACSHAGLVNKGLE------------------- 349
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVS-----WNSLLKGYVKRGDIDGAWKIFDEM 213
LFD+M + ++ + ++ Y + G ++ A + +EM
Sbjct: 350 -------------------LFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEM 390
Query: 214 PHR-NVVSWTTMISGCAQNGKSRQALSLFNEM 244
P + N V ++++ C +G A L +
Sbjct: 391 PMKPNEVVLGSLLAACRTHGDVNLAERLMKHL 422
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 178/527 (33%), Positives = 291/527 (55%), Gaps = 27/527 (5%)
Query: 30 RNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQM 89
R + ++HSQII GF + + + LL Y G + A ++F++ N W +
Sbjct: 16 RQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASI 75
Query: 90 IRGHARSETPEKSVYLYKQMIDKE-TEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASG 148
+ H ++ P +++ + M + +PD + ++ ++ C+ G R G+QVH R + S
Sbjct: 76 LTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSF 135
Query: 149 YCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWK 208
+C + ++++L+++Y G AR +FD + ++ VSW S++ GY + G A
Sbjct: 136 FCDDEVVKSSLIDMYTKCGQPDD---ARAVFDSILFKNSVSWTSMISGYARSGRKCEAMD 192
Query: 209 IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL-DQVALVAALSACAEIG 267
+F + P RN+ SWT +ISG Q+G + SLFNEMRR + + D + L + + CA +
Sbjct: 193 LFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLA 252
Query: 268 DLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
L+LGK IH V ++G E L ++NAL+ MYA C +I A +F +M R++ +SWT
Sbjct: 253 LLELGKQIHGLV---IALGFESCLF-ISNALVDMYAKCSDILAAKDIFYRMPRKDVISWT 308
Query: 328 SMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQN 372
S+I G A+ G A+EAL +TF+G+L ACSH G V GR+ F M +
Sbjct: 309 SIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTD 368
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQ 432
+ I P ++HY C++DL SR+G +DEA +L+ +P KP++ SLL C HNN E+ +
Sbjct: 369 YSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVR 428
Query: 433 VAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGV 492
+A + V ++ PE + Y+ L++NVYA A+ W V+ VR+ M M VRK PG S +
Sbjct: 429 IADR-VLDLKPEDPSTYI-LLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKD 486
Query: 493 LHDFVAGDST-YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
F AG+S + + I L ++ + + GY P+ S + IE+
Sbjct: 487 SQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQ 533
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 107/224 (47%), Gaps = 39/224 (17%)
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMP 183
L +CAR ++H +++ +G+ + + L+++Y G+CG + A LFD+MP
Sbjct: 10 LQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVY----GKCGLIPQALQLFDEMP 65
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
R VSW S+L + K +P R + TM + +G
Sbjct: 66 NRDHVSWASILTAHNKA-----------LIPRRTLSMLNTMFT---HDG----------- 100
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
+ D + AC+ +G L+LGK +H+ +F E V ++LI MY
Sbjct: 101 -----LQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVV----KSSLIDMYT 151
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFL 347
CG+ ++A VF + +N+VSWTSMI+G+A+ G EA+ FL
Sbjct: 152 KCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFL 195
>gi|449443656|ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Cucumis sativus]
Length = 525
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 182/491 (37%), Positives = 285/491 (58%), Gaps = 36/491 (7%)
Query: 72 HKVFEKTENPSTA----IWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSV 127
H+ NP++ +W + + R+ ++ + +M EP+ T+ LLS
Sbjct: 42 HRNISSKFNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSA 101
Query: 128 CAR--CGLFREGEQVHGRVLASGY-CSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMP 183
CA F +HG G +V + T L+++Y +C +G AR +F ++
Sbjct: 102 CADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMY----SKCAQLGHARKVFYNLG 157
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
++ VSWN++L G+++ G+I+ A ++FDEMP R+ +SWT +I+G ++G S QAL F++
Sbjct: 158 VKNSVSWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQ 217
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV-EENFSVGREPVLVSLNNALIHMY 302
M+R+ V D V+++A L+ACA++G L LG W+H +V + F + ++N+LI MY
Sbjct: 218 MQRSGVAADYVSIIAVLAACADLGALTLGLWVHRFVMPQEFKDN-----IKISNSLIDMY 272
Query: 303 ASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFL 347
+ CG IE A VF KM +R VSW S+I GFA G+A E+L +++
Sbjct: 273 SRCGCIEFARQVFVKMAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYT 332
Query: 348 GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM 407
G L+ACSH G V++G + F+ M I PRIEHYGC+VDL+ RAG +++A ++++ MPM
Sbjct: 333 GALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPM 392
Query: 408 KPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVA 467
KPN+ VLGSLL CR H + LA ++ + L ++DPE A Y L++N+YAA +W
Sbjct: 393 KPNEVVLGSLLAACRTHGDVNLAERLMKHLF-KLDPEGDA-YYVLLSNIYAAIGKWDGAN 450
Query: 468 AVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
VR+ M GV+K PG S V+I+G +H+FVAGD+ + A IY L + + GY P
Sbjct: 451 NVRRTMKARGVQKKPGYSSVEIDGKVHEFVAGDNYHADADNIYSMLDLLCHELKVCGYVP 510
Query: 528 DISELFLGIEE 538
S+ L +E
Sbjct: 511 G-SDTILNTKE 520
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 131/333 (39%), Gaps = 78/333 (23%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKE---- 113
L+ Y L +A KVF ++ WN M+ G R+ E ++ L+ +M ++
Sbjct: 136 LIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELAIQLFDEMPTRDAISW 195
Query: 114 ---------------------------TEPDEYTYSFLLSVCARCGLFREGEQVHGRVLA 146
D + +L+ CA G G VH V+
Sbjct: 196 TALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADLGALTLGLWVHRFVMP 255
Query: 147 SGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDG 205
+ N+ I +L+++Y CG + AR +F M R++VSWNS++ G+ G D
Sbjct: 256 QEFKDNIKISNSLIDMY----SRCGCIEFARQVFVKMAKRTLVSWNSIIVGFAVNGFADE 311
Query: 206 AWKIFDEMPHRNV----VSWTTMISGCAQNGKSRQALSLFNEMRR--------------- 246
+ + F M VS+T ++ C+ G + L LF+ M+
Sbjct: 312 SLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCIV 371
Query: 247 ---ARVGL---------------DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGRE 288
R G ++V L + L+AC GD+ L + + ++ + G +
Sbjct: 372 DLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKHLFKLDPEG-D 430
Query: 289 PVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR 321
V L+N +YA+ G+ + A V R M+ R
Sbjct: 431 AYYVLLSN----IYAAIGKWDGANNVRRTMKAR 459
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 41/212 (19%), Positives = 81/212 (38%), Gaps = 44/212 (20%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H ++ F I L+ Y G + A +VF K + WN +I G A +
Sbjct: 249 VHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSIIVGFAVNGF 308
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
++S+ + M + +PD +Y+ L+ C+ GL +G +
Sbjct: 309 ADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLE------------------- 349
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVS-----WNSLLKGYVKRGDIDGAWKIFDEM 213
LFD+M + ++ + ++ Y + G ++ A + +EM
Sbjct: 350 -------------------LFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEM 390
Query: 214 PHR-NVVSWTTMISGCAQNGKSRQALSLFNEM 244
P + N V ++++ C +G A L +
Sbjct: 391 PMKPNEVVLGSLLAACRTHGDVNLAERLMKHL 422
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 182/507 (35%), Positives = 281/507 (55%), Gaps = 55/507 (10%)
Query: 47 GFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLY 106
GF ++L L+ Y + G ++ AH +F + WN MI G+ ++ ++ V ++
Sbjct: 201 GFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMF 260
Query: 107 KQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMS 166
K M++ DE T LLSV CG R G+ G+ +A +R+ NL
Sbjct: 261 KGMLEVRAPFDEVT---LLSVATACG--RLGDANLGQWIAEYAEEKGMLRSR--NLA--- 310
Query: 167 GGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMIS 226
+L+ Y K G++D A ++FD M R+VV+W+ MIS
Sbjct: 311 ------------------------TALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMIS 346
Query: 227 GCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVG 286
G Q+ + R+AL++FNEM+ V + V +V+ LSACA +G L+ GKW+HSY+
Sbjct: 347 GYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRK---- 402
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--- 343
P+ V L AL+ YA CG I++A F M RNT +WT++I G A G ++EAL
Sbjct: 403 DLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELF 462
Query: 344 ------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSR 391
+TF+GVL ACSHG V+EGR+ F M Q++GI PRIEHYGCMVDL R
Sbjct: 463 SSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGR 522
Query: 392 AGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLA 451
AGL+DEA+ ++NMP++PN V +LL C +H N E+ + +++V +DP + Y+
Sbjct: 523 AGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVP-LDPCHSGNYI- 580
Query: 452 LVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYK 511
L++N YA+ +W++ A VR++M + GV K PG S +++ G + +F A DS + Q + IY+
Sbjct: 581 LLSNTYASVGQWKNAAMVRKEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYE 640
Query: 512 TLGEITMQAMQEGYKPDISELFLGIEE 538
+ E+ GY P+ ++ L ++E
Sbjct: 641 KVHEMIENIKMVGYIPNTADARLDVDE 667
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 178/504 (35%), Positives = 272/504 (53%), Gaps = 30/504 (5%)
Query: 53 YILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDK 112
++ L+ Y G + A VF++ WN MI + R +++ L+++M D
Sbjct: 150 FVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDS 209
Query: 113 ETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV 172
PDE ++S C R G R ++ ++ + + + T L+ +Y G
Sbjct: 210 NVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMY------AGA 263
Query: 173 GCARL---LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCA 229
GC + F M R++ +++ GY K G +D A IFD+ +++V WTTMIS A
Sbjct: 264 GCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYA 323
Query: 230 QNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREP 289
++ ++AL +F EM + + D V +++ +SAC +G L KW+H Y N G E
Sbjct: 324 ESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLN---GLES 380
Query: 290 VLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------ 343
VL ++NALI+MYA CG ++ A VF KM RN VSW+SMI FA G A ++L
Sbjct: 381 VL-PIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQM 439
Query: 344 ---------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGL 394
+TF+GVL CSH G V+EG++ F M + I P+IEHYGCMVDLF RA L
Sbjct: 440 KQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANL 499
Query: 395 MDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVA 454
+ EA ++++MPM PN + GSL+ CR+H EL ++A K + +++P+ G L L++
Sbjct: 500 LREALEVIESMPMAPNVVIWGSLMSACRVHGELELG-ELAAKRILKLEPDH-DGALVLMS 557
Query: 455 NVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLG 514
N+YA RW V +R M K V K G S + +NG H+F+ GD +KQ++ IY L
Sbjct: 558 NIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFLIGDKRHKQSNEIYTKLY 617
Query: 515 EITMQAMQEGYKPDISELFLGIEE 538
E+ + GY PD + + +EE
Sbjct: 618 EVVSKLKLAGYVPDGGSVLVDVEE 641
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H +NG I L+ Y G L A VFEK + W+ MI A
Sbjct: 369 VHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGE 428
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHG----------RVLASG 148
S+ L+ QM + EP+E T+ +L C+ GL EG+++ ++ G
Sbjct: 429 ASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYG 488
Query: 149 YCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMP-ARSVVSWNSLLKGYVKRGDID 204
++F R NL+ L + + MP A +VV W SL+ G+++
Sbjct: 489 CMVDLFGRANLLREALE------------VIESMPMAPNVVIWGSLMSACRVHGELE 533
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 176/517 (34%), Positives = 277/517 (53%), Gaps = 55/517 (10%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
+IHS ++ G+ ++ LL+ YV +A KVF+ + + W +I G+ S
Sbjct: 134 LKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISS 193
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
+++ +K++++ +PD ++ +L+ CAR G GE + + SG NVF+
Sbjct: 194 GHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVA 253
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
T SLL YVK G+++ A IF MP +
Sbjct: 254 T----------------------------------SLLDMYVKCGNLERANLIFSAMPEK 279
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
++VSW+TMI G A NG +QAL LF +M+ + D +V LSACA +G L LG W
Sbjct: 280 DIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWAS 339
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
S ++ N PVL ALI MY+ CG + +A+ +F M++++ V W +M+ G +
Sbjct: 340 SLMDRN-EFLSNPVL---GTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMN 395
Query: 337 GYAQEALL---------------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G+A+ TF+G+L C+HGGFV+EGRQFF M + + + P IEH
Sbjct: 396 GHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEH 455
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YGCMVDL RAGL++EA L+ NMPMKPN V G+LL GC++H + LA QV +KL+ E+
Sbjct: 456 YGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLI-EL 514
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+P + Y+ L +N+Y+ RW++ +R M + ++K SW++I+G++H+F+ GD
Sbjct: 515 EPWNSGNYVQL-SNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDK 573
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++ + IY L E+ + G+ P + IEE
Sbjct: 574 SHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEE 610
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 214/440 (48%), Gaps = 61/440 (13%)
Query: 7 IPANPATS--SKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVT 64
I NP++ SKAL + S N L IH++++ Q NY+L +L +
Sbjct: 3 ILTNPSSPVFSKALEIKNYLS--NGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALD 60
Query: 65 SGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFL 124
G + VF + + P+ +WN MIRG + + +++LY M P+ +T F+
Sbjct: 61 FGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFV 120
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGEC-GVGCARLLFDDMP 183
L CAR R G ++H ++ +GY +VF++T+L++LY+ +C A +FDD+P
Sbjct: 121 LKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYV----KCDNFDDALKVFDDIP 176
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
++VVSW +++ GY+ G R+A+ F +
Sbjct: 177 DKNVVSWTAIITGYISSGHF-------------------------------REAIGAFKK 205
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
+ + D +LV L+ACA +GD G+WI Y+ ++ +GR V + +L+ MY
Sbjct: 206 LLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDS-GMGRN---VFVATSLLDMYV 261
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLG 348
CG +E A +F M ++ VSW++MI G+A G Q+AL T +G
Sbjct: 262 KCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVG 321
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
VLSAC+ G +D G M++N + + ++D++S+ G + +A+ + M K
Sbjct: 322 VLSACATLGALDLGIWASSLMDRNEFLSNPVLGTA-LIDMYSKCGSVTQAWEIFTAMK-K 379
Query: 409 PNDAVLGSLLLGCRIHNNAE 428
+ V ++++G ++ +A+
Sbjct: 380 KDRVVWNAMMVGLSMNGHAK 399
>gi|147771061|emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]
Length = 722
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 184/490 (37%), Positives = 291/490 (59%), Gaps = 30/490 (6%)
Query: 19 TTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFE 76
T++ + S+ + + L IH++ +LAK+ F S G L A ++F
Sbjct: 240 TSQSLASMAEACLAMQALKLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLHYADRLFS 299
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR----CG 132
+ P+T +N +IRG+++S +P +SV L+ QM +PD +T++FLL +R
Sbjct: 300 QIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLP 359
Query: 133 LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNS 192
L +++HG VL G+C ++F+ L++LY G A +F++M VVSW+
Sbjct: 360 LIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAA---AHQVFNEMVGADVVSWSG 416
Query: 193 LLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLD 252
L+ +V+ G+++ A ++FDEMP R+VVSWT M+SG AQ +SR+AL LF EMR V D
Sbjct: 417 LVVAHVRAGELELARQVFDEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPD 476
Query: 253 QVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAY 312
+VA+V +SAC +GDL+ G +H Y++EN G +VSL NALI MYA CG ++ A+
Sbjct: 477 EVAMVIVISACTSLGDLETGFEVHRYIDEN-GFG---WMVSLCNALIDMYAKCGCMDLAW 532
Query: 313 GVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGG 357
VF M+R++ ++W SMI+ A G A++A +TFL +L+A +H G
Sbjct: 533 QVFNNMERKSLITWNSMISACANHGNAEDAFRVFTLMLXSGIRPDGVTFLALLTAYTHKG 592
Query: 358 FVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSL 417
+VD+G FE M +++G++ +EHYGCMVD+ RAG ++EA+ L+ +M M ND V G+L
Sbjct: 593 WVDDGYGLFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGAL 652
Query: 418 LLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMG 477
L CRI+ + E+ +V +KL+ E+ P++ GY L+ ++Y AA R + +R+ M G
Sbjct: 653 LAACRIYGDVEMGERVLKKLI-ELKPDE-GGYYILLRDIYVAAGRRAEAIELRRAMDVNG 710
Query: 478 VRKPPGQSWV 487
+K G SWV
Sbjct: 711 AKKTLGCSWV 720
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 131/521 (25%), Positives = 227/521 (43%), Gaps = 107/521 (20%)
Query: 19 TTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFE 76
T++ + S+ + + L IH++ +LAK+ F S G L A ++F
Sbjct: 86 TSQSLASMAEACLAMQALKLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLHYADRLFS 145
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR----CG 132
+ P+T +N +IRG+++S +P +SV L+ QM +PD +T++FLL +R
Sbjct: 146 QIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLP 205
Query: 133 LFREGEQVHG--------RVLASGYCSNVFIRTNLMNLYLMSGGE-CGVGCARLLFDDMP 183
L +++HG + L S Y SN + + L S E C A L
Sbjct: 206 LIVASDEIHGAGVDYDKYKTLKS-YISNKVMHMLPTSQSLASMAEACLAMQALKLIHARA 264
Query: 184 ARSVVSWNSLLKGYVKR-------GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
R+ + ++L+ + R G + A ++F ++ N + T+I G +++ Q
Sbjct: 265 FRANLHNHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQ 324
Query: 237 ALSLFNEMR-----------------RARVGLDQVALVAALSACAEIGDLKLGKWIHSYV 279
++ LFN+MR R+R+ +D +VA+ + LKLG H +V
Sbjct: 325 SVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDEIHGAV--LKLGFCFHLFV 382
Query: 280 EENFSVGREPVLVSLNNALIHMYAS-------------------------------CGEI 308
NALIH+YA+ GE+
Sbjct: 383 M---------------NALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVRAGEL 427
Query: 309 EEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF---------------LGVLSAC 353
E A VF +M R+ VSWT M++G+A+ ++EAL F + V+SAC
Sbjct: 428 ELARQVFDEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVIVISAC 487
Query: 354 SHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAV 413
+ G ++ G + +++N G + ++D++++ G MD A+ + NM K +
Sbjct: 488 TSLGDLETGFEVHRYIDEN-GFGWMVSLCNALIDMYAKCGCMDLAWQVFNNMERK-SLIT 545
Query: 414 LGSLLLGCRIHNNAELASQV-AQKLVAEIDPEQAAGYLALV 453
S++ C H NAE A +V L + I P+ +LAL+
Sbjct: 546 WNSMISACANHGNAEDAFRVFTLMLXSGIRPD-GVTFLALL 585
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 175/516 (33%), Positives = 282/516 (54%), Gaps = 56/516 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QI II G+ + + LL+ Y G L +AH+VFEK + WN MI + + E
Sbjct: 434 QIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHE 493
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+ ++ ++ ++ + +P+ T++ +L+VC G+ VH ++ +G S++ +
Sbjct: 494 QYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVS- 552
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
N+L+ +V GD+ A +F++MP R+
Sbjct: 553 ---------------------------------NALVSMFVNCGDLMSAKNLFNDMPKRD 579
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+VSW T+I+G Q+GK++ A F M+ + + D++ L+ACA L G+ +H+
Sbjct: 580 LVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHA 639
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
+ E + VLV LI MY CG IE+A+ VF K+ ++N SWTSMITG+A+ G
Sbjct: 640 LITE--AAFDCDVLVG--TGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHG 695
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+EAL +TF+G LSAC+H G ++EG F+ M + + I+PR+EHY
Sbjct: 696 RGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKE-FNIEPRMEHY 754
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
GCMVDLF RAGL++EA + M ++P+ V G+LL C++H N ELA + AQK + E+D
Sbjct: 755 GCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKL-ELD 813
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P G +++N+YAAA W++VA +R+ M+ GV K PGQSW++++G +H F + D T
Sbjct: 814 PNDN-GVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKT 872
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ Q I+ L + M+ Q GY PD + +E+
Sbjct: 873 HPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVED 908
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 219/455 (48%), Gaps = 62/455 (13%)
Query: 14 SSKALTTRQIFS-LLQIRNTTKTLF---QIHSQIIINGFSQKNYILAKLLAFYVTSGYLI 69
SS RQ +S LLQ+ K L +I++ I +G ++ L+ Y G I
Sbjct: 103 SSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTI 162
Query: 70 NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
+A ++F+ WN ++ G+ + E++ L++QM+ +PD+ T+ +L+ CA
Sbjct: 163 SAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACA 222
Query: 130 RCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVS 189
+G +++ +L +G+ +++F+ T L+N++
Sbjct: 223 DARNVDKGRELYNLILKAGWDTDLFVGTALINMH-------------------------- 256
Query: 190 WNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARV 249
+K GDI A K+FD +P R++V+WT+MI+G A++G+ +QA +LF M V
Sbjct: 257 --------IKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGV 308
Query: 250 GLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIE 309
D+VA V+ L AC L+ GK +H+ ++E VG + + + A++ MY CG +E
Sbjct: 309 QPDKVAFVSLLRACNHPEALEQGKKVHARMKE---VGWD-TEIYVGTAILSMYTKCGSME 364
Query: 310 EAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALL---------------TFLGVLSACS 354
+A VF ++ RN VSWT+MI GFA+ G EA L TF+ +L ACS
Sbjct: 365 DALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACS 424
Query: 355 HGGFVDEGRQFFE-CMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAV 413
+ G+Q + + +G R+ ++ ++++ G + +A + + + K N
Sbjct: 425 SPSALKRGQQIQDHIIEAGYGSDDRVR--TALLSMYAKCGSLKDAHRVFEKIS-KQNVVA 481
Query: 414 LGSLLLGCRIHNNAELASQVAQKLVAE-IDPEQAA 447
+++ H + A Q L+ E I P +
Sbjct: 482 WNAMITAYVQHEQYDNALATFQALLKEGIKPNSST 516
>gi|297738897|emb|CBI28142.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 191/561 (34%), Positives = 299/561 (53%), Gaps = 84/561 (14%)
Query: 8 PANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV--TS 65
P + +TSS T + LL+ + + L QI +QI+ GF Q L K + +
Sbjct: 21 PLHLSTSSH-FTKKSCIFLLKNCKSMQHLKQIQTQILRTGFHQSGDTLNKFMVCCTDPSI 79
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
G L A ++F + P I+N +I+ ++ + K+V L++Q+ ++ PD +TY F+
Sbjct: 80 GNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVF 139
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLY---------------------- 163
G REGE+V+G V+ SG + ++ +LM++Y
Sbjct: 140 KAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVV 199
Query: 164 ----LMSG------GECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
L+SG E V R +F+DMP ++V+ W S++ GYV G +D A ++F+
Sbjct: 200 SWNVLISGYVKCRRYEDAVDVFRQIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERS 259
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK 273
P R+VV WT MI+G Q + A++LF EM+ RV D+ LVA L+
Sbjct: 260 PVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTDAV--------- 310
Query: 274 WIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF 333
+ ALI MYA CG IE++ +F ++ ++T SWTS+I G
Sbjct: 311 --------------------VGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGL 350
Query: 334 AKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
A G +AL +TF+GVLSACSHGG V+EGR+ F M + I+P+
Sbjct: 351 AMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPK 410
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL---GSLLLGCRIHNNAELASQVAQ 435
+EHYGC++DL RAG +DEA L++ P N+ ++ G+LL CR H N E+ +VA+
Sbjct: 411 LEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAK 470
Query: 436 KLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHD 495
+LV I+ ++ + L+AN+YA+A RW+DV VR+KM +GV+K PG S V++NG++H+
Sbjct: 471 RLVG-IESGDSSVH-TLLANIYASADRWEDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHE 528
Query: 496 FVAGDSTYKQASLIYKTLGEI 516
F+ GD+++ + IY L I
Sbjct: 529 FLVGDASHPEMREIYSMLDSI 549
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 185/553 (33%), Positives = 298/553 (53%), Gaps = 31/553 (5%)
Query: 6 IIPA-NPATSSK----ALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
++P+ PA+ S ALT + SLL +T + ++H+ ++ G + +L
Sbjct: 5 VLPSVAPASDSGGHHGALTADRAASLLAACSTARRASELHAAVVRKGLDSDRAVAFRLQR 64
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y SG L ++ + +T++P+T + I H+ + L M+ + P +T
Sbjct: 65 AYAASGRLDHSLTLLGRTKDPTTIFYTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHT 124
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFD 180
S L C L G +H + ++ T L+++Y +G AR LFD
Sbjct: 125 LSASLPACRGLSL---GRALHAYAFKLALSGDSYVATALLSMYARAGDAAA---ARALFD 178
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSL 240
+MP VVS ++L Y G +D A ++FD +P ++ + W MI G Q+GK +AL L
Sbjct: 179 EMPDPHVVSVTAMLTCYANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQL 238
Query: 241 FNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIH 300
F M R+ D+V +V LSA A++G ++ GKW+HSYV+ + V + V + AL+
Sbjct: 239 FRRMLRSSAEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRCV---QLNVRVATALVD 295
Query: 301 MYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LT 345
MY CG +E+A VF + ++ V W +MI G+A G +++AL +T
Sbjct: 296 MYCKCGSLEDAVAVFHGIGNKDIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDIT 355
Query: 346 FLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
F+G+L+ACSH G V+EGR FF+ M +GI P+IEHYGCMVDL RAGL++EAF LVQ++
Sbjct: 356 FIGLLNACSHSGLVEEGRSFFQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSL 415
Query: 406 PMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQD 465
+ P+ + SLL CR+H N L ++A LVA + +G L++N+YAA +W++
Sbjct: 416 TITPDAVMWVSLLAACRLHKNMALGQRIADFLVA--NGLANSGMYILLSNIYAAVGKWEE 473
Query: 466 VAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGY 525
VA VR M G++K PG S ++I+ +++FVAGD ++ IY L ++ + G+
Sbjct: 474 VARVRSMMKASGIQKEPGCSAIEIDRKVYEFVAGDMSHPCTDEIYAMLDKMNALVKEHGH 533
Query: 526 KPDISELFLGIEE 538
P + ++E
Sbjct: 534 VPQTELVLHDLDE 546
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 189/560 (33%), Positives = 294/560 (52%), Gaps = 67/560 (11%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGH 93
KTL ++H+ I Q + KL+ Y G KVF++ + + +N MIR +
Sbjct: 35 KTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSY 94
Query: 94 ARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNV 153
+ + + ++++M++ PD YTY +L C+ R G +HG VL G N+
Sbjct: 95 VNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNL 154
Query: 154 FIRTNLMNLYLMSGGECGVGC---ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAW--- 207
F+ L+ +Y G+CG C AR +FD+M + VVSWNS++ GY D A
Sbjct: 155 FVGNGLIAMY----GKCG--CLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEIC 208
Query: 208 ----------------------------------KIFDEMPHRNVVSWTTMISGCAQNGK 233
KIF + +N++SW MI +N
Sbjct: 209 REMEDYGQKPDGCTMASLMPAVANTSSENVLYVEKIFVNLERKNLISWNVMIRVYMKNSL 268
Query: 234 SRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVS 293
QA+ L+ +M + RV D + + L AC ++ L LG+ IH YVE+ P L+
Sbjct: 269 PTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLC---PNLL- 324
Query: 294 LNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMIT--GFAKQGYAQEALLT------ 345
L N+LI MYA CG +++A VF +M+ R+ SWTS+I+ G QG AL T
Sbjct: 325 LENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSG 384
Query: 346 -------FLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEA 398
F+ +LSACSH G +DEGR +F+ M ++ I PRIEHY C+VDL RAG +DEA
Sbjct: 385 QAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEA 444
Query: 399 FSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYA 458
+++++ MP++PN+ V +LL CR+ N ++ A L+ ++ PEQ +GY L++N+YA
Sbjct: 445 YNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAADNLL-QLAPEQ-SGYYVLLSNIYA 502
Query: 459 AAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITM 518
A RW++V +R M + +RK PG S V++N +H F+AGD+++ Q+ IY+ LG +
Sbjct: 503 KAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVA 562
Query: 519 QAMQEGYKPDISELFLGIEE 538
+ + GY P+ +EE
Sbjct: 563 KMKELGYVPETDSALHDVEE 582
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 166/520 (31%), Positives = 293/520 (56%), Gaps = 33/520 (6%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H I + ++ L+ Y + G L +A KVF + WN MI G + +
Sbjct: 155 LHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 214
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
P+K++ L+K+M ++ + T +LS CA+ G +V + + N+ +
Sbjct: 215 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANA 274
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
++++Y G + A+ LFD M + V+W ++L GY D + A ++ + MP +++
Sbjct: 275 MLDMYTKCGS---IEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDI 331
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMR-RARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
V+W +IS QNGK +AL +F+E++ + + L+Q+ LV+ LSACA++G L+LG+WIHS
Sbjct: 332 VAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHS 391
Query: 278 YVEENFSVGREPVLVSLN----NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF 333
Y+++N + +N +ALIHMY+ CG++E+A VF +++R+ W++MI G
Sbjct: 392 YIKKNG--------IKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGL 443
Query: 334 AKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
A G EA+ +TF V ACSH G VDE F M ++GI P
Sbjct: 444 AMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPE 503
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
+HY C+VD+ R+G +++A ++ MP+ P+ +V G+LL C+IH N LA +L+
Sbjct: 504 DKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLL 563
Query: 439 AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVA 498
E++P ++ L++N+YA + +W +V+ +R+ M G++K PG S ++I+G++H+F++
Sbjct: 564 -ELEPRNDGAHV-LLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLS 621
Query: 499 GDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
GD+ + + +Y L E+ + GY+P++S + IEE
Sbjct: 622 GDNAHPMSEKVYGKLHEVMEKLKSNGYEPEMSHVLQIIEE 661
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 216/469 (46%), Gaps = 96/469 (20%)
Query: 8 PANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY 67
P P T+++ +R SL+ ++ + L Q H+ +I G Y +KL A S +
Sbjct: 21 PNQPTTNNE--RSRHTISLIDRCSSLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSF 78
Query: 68 --LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETE--PDEYTYSF 123
L A KVF++ P++ WN +IR +A P S++ + M+ E++ P++YT+ F
Sbjct: 79 ASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPF 138
Query: 124 LLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMP 183
L+ A G+ +HG + S S+VF+ +L++ Y S G+ C +F +
Sbjct: 139 LIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYF-SCGDLDSACK--VFTTIK 195
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
+ VVSWNS++ G+V++G D A ++F +M +V +
Sbjct: 196 EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKA----------------------- 232
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
V +V LSACA+I DL+ G+ + SY+EEN R V ++L NA++ MY
Sbjct: 233 --------SHVTMVGVLSACAKIRDLEFGRRVCSYIEEN----RVNVNLTLANAMLDMYT 280
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFA----------------------------- 334
CG IE+A +F M+ ++ V+WT+M+ G+A
Sbjct: 281 KCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISA 340
Query: 335 --KQGYAQEALLTF----------------LGVLSACSHGGFVDEGRQFFECMNQNWGIK 376
+ G EALL F + LSAC+ G ++ GR + +N GIK
Sbjct: 341 YEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKN-GIK 399
Query: 377 PRIEHYGCMVDLFSRAGLMD---EAFSLVQNMPMKPNDAVLGSLLL-GC 421
++ ++S+ G ++ E F+ V+ + A++G L + GC
Sbjct: 400 MNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGC 448
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 185/536 (34%), Positives = 297/536 (55%), Gaps = 35/536 (6%)
Query: 26 LLQIRNTTKTLFQIHSQIIINGFS----QKNYILAKLLAFYVTSGYLINAHKVFEKTENP 81
LL + + + Q+H+++I G N +L +L + + Y AH VF+ P
Sbjct: 7 LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISY---AHMVFDHFPQP 63
Query: 82 STAIWNQMIRGHARSETPEKSVYL-YKQMIDKET-EPDEYTYSFLLSVCARCGLFREGEQ 139
++N +I+ A S T + ++ +I +E P++Y+++F C EGEQ
Sbjct: 64 DLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCGSGVGVLEGEQ 123
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVK 199
V + G +N+F+ L+ +Y+ V AR +FD P R + SWN +L GY +
Sbjct: 124 VRVHAIKLGLENNLFVTNALIGMYVNLDF---VVDARKVFDWSPNRDMYSWNIMLSGYAR 180
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
G +D A ++FDEMP ++VVSWTTMISGC Q G +AL +F+ M + ++ L ++
Sbjct: 181 LGKMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSPNEYTLASS 240
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
L+ACA + L G+W+H Y+++N E +L LI MYA CGE+E A +F
Sbjct: 241 LAACANLVALDQGRWMHVYIKKNNIQMNERLLA----GLIDMYAKCGELEFASKLFNSNP 296
Query: 320 R--RNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEG 362
R R W +MI GFA G ++EA+ +TF+ +L+ACSHG V+EG
Sbjct: 297 RLKRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSHGNRVEEG 356
Query: 363 RQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCR 422
R +FE M ++ +KP +EHYGC+VDL RAG + EA ++ +M + P+ A+ G+LL C+
Sbjct: 357 RYYFESMASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLSACK 416
Query: 423 IHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPP 482
IH +AE+ +V K+V E+DP G L+AN+Y+ W + +R+K+ + G +K P
Sbjct: 417 IHKDAEMGERVG-KIVKELDPNH-LGCHVLLANIYSLTGNWNEARTLREKIAESGKKKTP 474
Query: 483 GQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
G S +++NG+ H F+ GD ++ Q +Y L E+ + GY P+ E+ L I++
Sbjct: 475 GCSSIELNGMFHQFLVGDRSHPQTKQLYLFLDEMITKLKIAGYIPESGEVLLDIDD 530
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 172/499 (34%), Positives = 276/499 (55%), Gaps = 30/499 (6%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
L+ Y+ G + A K+F++ + + ++N ++ + R + + + +M+ PD
Sbjct: 281 LVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPD 340
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
T +S C+ G+ HG VL +G + ++N+Y+ G + + C
Sbjct: 341 RITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQ-EMACR-- 397
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
+FD M ++ VSWNSL+ G+V+ GD++ AWKIF MP ++VSW TMI Q ++A
Sbjct: 398 VFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEA 457
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE---NFSVGREPVLVSL 294
+ LF M+ + D+V +V SAC +G L L KWIH Y+++ +F + L
Sbjct: 458 IELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDM-------HL 510
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------- 343
AL+ M+A CG+ + A VF KM +R+ +WT+ I A +G A+
Sbjct: 511 GTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGI 570
Query: 344 ----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAF 399
+ F+ +L+A SHGG V++G F M +GI P+ HYGCMVDL RAGL+ EA
Sbjct: 571 KPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEAL 630
Query: 400 SLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAA 459
SL+ +M M+PND + GSLL CR+H N ++A+ A++ ++E+DPE+ G L++N+YA+
Sbjct: 631 SLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAER-ISELDPER-TGIHVLLSNIYAS 688
Query: 460 AKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
A RW DVA VR + + G K PG S ++ING + +F GD ++ + + I L EI +
Sbjct: 689 AGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCR 748
Query: 520 AMQEGYKPDISELFLGIEE 538
GY PD++ + L + E
Sbjct: 749 LRDIGYVPDLTNVLLDVNE 767
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 188/392 (47%), Gaps = 74/392 (18%)
Query: 6 IIPANPATSSKALTTRQIFSLLQIRNTTKT-----------LFQIHSQIIINGFSQKNYI 54
+IPA P +S AL + +L ++ T L Q+HSQI NG +
Sbjct: 10 LIPATP--TSVALPNQNELKILTKHRSSPTGSFKKCKTMTELKQLHSQITKNGLNHHPLS 67
Query: 55 LAKLLAFYVTSG------YLINAHKVFEKTEN--PSTAIWNQMIRGHARSETPEKSVYLY 106
L L++ G Y A ++F + + +++ +IRG + K++ ++
Sbjct: 68 LTNLISSCTEMGTFESLEYAQKALELFIEDNGIMGTHYMFSSLIRGFSACGLGYKAIVVF 127
Query: 107 KQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMS 166
+Q++ PD +T+ F+LS C + EG QVHG ++ G+ ++F+ +L++ Y
Sbjct: 128 RQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFY--- 184
Query: 167 GGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMIS 226
GECG +ID ++FD+M RNVVSWT++I
Sbjct: 185 -GECG------------------------------EIDCMRRVFDKMSERNVVSWTSLIG 213
Query: 227 GCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVG 286
G A+ G ++A+SLF EM + + V +V +SACA++ DL+LG+ + + + E +
Sbjct: 214 GYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGE-LELE 272
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--- 343
++V NAL+ MY CG I++A +F + +N V + ++++ + +QG A+E L
Sbjct: 273 VNALMV---NALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVL 329
Query: 344 ------------LTFLGVLSACSHGGFVDEGR 363
+T L +SACS V G+
Sbjct: 330 GEMLKHGPRPDRITMLSAVSACSELDDVSCGK 361
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 154/310 (49%), Gaps = 38/310 (12%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
FQ+H I+ GF + ++ L+ FY G + +VF+K + W +I G+A+
Sbjct: 159 FQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKR 218
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
+++V L+ +M++ P+ T ++S CA+ + GEQV C+ +
Sbjct: 219 GCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQV---------CTCI--- 266
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
GE + L+ N+L+ Y+K G ID A KIFDE +
Sbjct: 267 -----------GELELEVNALMV-----------NALVDMYMKCGAIDKARKIFDECVDK 304
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
N+V + T++S + G +R+ L++ EM + D++ +++A+SAC+E+ D+ GKW H
Sbjct: 305 NLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCH 364
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
YV N G + V NA+I+MY CG+ E A VF +M + VSW S+I GF +
Sbjct: 365 GYVLRNGLEGWDNVC----NAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRN 420
Query: 337 GYAQEALLTF 346
G + A F
Sbjct: 421 GDMESAWKIF 430
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 131/296 (44%), Gaps = 15/296 (5%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
H ++ NG + + ++ Y+ G A +VF++ N + WN +I G R+
Sbjct: 364 HGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDM 423
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
E + ++ M D D +++ ++ + +F+E ++ + + G ++ + +
Sbjct: 424 ESAWKIFSAMPDS----DLVSWNTMIGALVQESMFKEAIELFRVMQSEGITAD---KVTM 476
Query: 160 MNLYLMSGGECGVGCARLLFDDMPARSVVS----WNSLLKGYVKRGDIDGAWKIFDEMPH 215
+ + G + A+ + + + + +L+ + + GD A ++F++M
Sbjct: 477 VGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVK 536
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
R+V +WT I A G A+ LF+EM + + D V VA L+A + G ++ G I
Sbjct: 537 RDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHI 596
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR-NTVSWTSMI 330
+++ + + + V ++ + G + EA + MQ N V W S++
Sbjct: 597 FRSMKDIYGIAPQAVHY---GCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLL 649
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 191/571 (33%), Positives = 297/571 (52%), Gaps = 66/571 (11%)
Query: 24 FSLLQIRNT---TKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTEN 80
F L Q+ +T KTL +HS+II + + KL+ Y + + A KVF++
Sbjct: 44 FMLGQVLDTYPDLKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPE 103
Query: 81 PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
+ I N MIR + + + + ++ M +PD YT+ +L C+ G G+++
Sbjct: 104 RNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKI 163
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVK 199
HG G S +F+ L+++Y G+CG + ARL+ D+M R VVSWNSL+ GY +
Sbjct: 164 HGSATKVGLSSTLFVGNGLVSMY----GKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQ 219
Query: 200 RGDIDGAWKI-------------------------------------FDEMPHRNVVSWT 222
D A ++ F +M +++VSW
Sbjct: 220 NQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWN 279
Query: 223 TMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEEN 282
MI +N +A+ L++ M D V++ + L AC + L LGK IH Y+E
Sbjct: 280 VMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERK 339
Query: 283 FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMIT--GFAKQGYAQ 340
+ P L+ L NALI MYA CG ++ A VF M+ R+ VSWT+MI+ GF+ +G
Sbjct: 340 KLI---PNLL-LENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDA 395
Query: 341 EALLT-------------FLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVD 387
AL + F+ L+ACSH G ++EGR F+ M ++ I PR+EH CMVD
Sbjct: 396 VALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVD 455
Query: 388 LFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAA 447
L RAG + EA+ +Q MPM+PN+ V G+LL CR+H+N ++ A KL ++ PEQ +
Sbjct: 456 LLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLF-QLAPEQ-S 513
Query: 448 GYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQAS 507
GY L++N+YA A RW++V +R M G++K PG S V++N ++H F+ GD ++ Q++
Sbjct: 514 GYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSA 573
Query: 508 LIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
IY+ L + + + GY PD +EE
Sbjct: 574 EIYRELDVLVKKMKELGYVPDSESALHDVEE 604
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 176/479 (36%), Positives = 279/479 (58%), Gaps = 35/479 (7%)
Query: 85 IWNQMIRGH----ARSETPEKS-VYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
+WN +IR H A+ P S + ++ +M +PD +T+ FLL A L G
Sbjct: 26 LWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRS 85
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYV 198
VH ++L G + F++T+L+++Y CG +G AR +FD++P + SWNS++
Sbjct: 86 VHAQILRFGLAIDPFVQTSLISMY----SSCGNLGFARQVFDEIPQPDLPSWNSIINANF 141
Query: 199 KRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG---LDQVA 255
+ G +D A +F MP RNV+SW+ MI+G + G+ ++AL+LF EM+ V ++
Sbjct: 142 QAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFT 201
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
+ L+AC +G L+ GKW H+Y+++ PV V L ALI MYA CG +E+A VF
Sbjct: 202 MSGVLAACGRLGALEHGKWAHAYIDK----CGMPVDVVLGTALIDMYAKCGSVEKATWVF 257
Query: 316 RKM-QRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFV 359
+ ++ ++W++MI+G A G A+E + +TFL V AC HGG V
Sbjct: 258 SNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLV 317
Query: 360 DEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLL 419
EG+ + M +++ I P I+HYGCMVDL+ RAG + EA+++V++MPM+P+ V G+LL
Sbjct: 318 SEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLS 377
Query: 420 GCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVR 479
G R+H + E +KL+ E++P + Y+ L++NVYA RW+DV VR M MG++
Sbjct: 378 GSRMHGDIETCELALKKLI-ELEPTNSGAYV-LLSNVYAKRGRWEDVRHVRDLMETMGIK 435
Query: 480 KPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
K PG S +++ GVLH+F GD ++ + I+ L EI + EGY + E+ L ++E
Sbjct: 436 KVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLLDLDE 494
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 139/337 (41%), Gaps = 75/337 (22%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+H+QI+ G + ++ L++ Y + G L A +VF++ P WN +I + ++
Sbjct: 85 SVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAG 144
Query: 98 -----------TPEKSVYLYKQMID-----------------------KETEPDEYTYSF 123
PE++V + MI+ + P+E+T S
Sbjct: 145 LVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSG 204
Query: 124 LLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDM 182
+L+ C R G G+ H + G +V + T L+++Y +CG V A +F ++
Sbjct: 205 VLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMY----AKCGSVEKATWVFSNL 260
Query: 183 -PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
P + V++W++ MISG A +G + + + LF
Sbjct: 261 GPNKDVMAWSA-------------------------------MISGLAMHGLAEECVGLF 289
Query: 242 NEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHM 301
++M V + V +A AC G + GK + E++S+ + ++ +
Sbjct: 290 SKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPT---IQHYGCMVDL 346
Query: 302 YASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAKQG 337
Y G I+EA+ V + M + + W ++++G G
Sbjct: 347 YGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHG 383
>gi|225434183|ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 513
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 185/490 (37%), Positives = 274/490 (55%), Gaps = 29/490 (5%)
Query: 33 TKTLFQIHSQIIING--FSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMI 90
TK L QI +Q+I N N I KL+ + L +A +F + NP+ WN +I
Sbjct: 24 TKQLLQIQAQLITNPPLSLHPNLIAVKLIGACAANANLYHAQLIFAQLPNPNVFSWNAII 83
Query: 91 RGHARSETPEKSVYLYKQMIDKET--EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASG 148
+ H E ++ + + + + P+EY Y+ L+ CA +G +VH V+ SG
Sbjct: 84 KAHINCGAWEHALNCFNRQLSLPSAPNPNEYIYTSLIKACAGLEAIADGLKVHAVVIKSG 143
Query: 149 YCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWK 208
+N+ + T+L+++Y G +FD+MP R VVSWN+++ GY GD++ A +
Sbjct: 144 LDNNIHLGTSLVDMYFKFREPASAG---QVFDEMPLRDVVSWNTMVSGYCLCGDLESARR 200
Query: 209 IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR-ARVGLDQVALVAALSACAEIG 267
+FD+M R+V+SW MI G QNGK A+ +F+EM++ V D V LV+ LSACA +G
Sbjct: 201 VFDQMLERDVISWNAMIGGYVQNGKYSDAIEVFHEMQKVGGVVPDDVTLVSVLSACAHVG 260
Query: 268 DLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
L G+WI +V GR L L NALI MYA CG +EEA +F M+ R+ +SW+
Sbjct: 261 ALDFGRWIDRFVGWR---GRGLNLY-LGNALIDMYAKCGTMEEARRIFDGMRERDVISWS 316
Query: 328 SMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQN 372
+MI G G A EA +TF+G+LSACSH G VD+G + F M Q
Sbjct: 317 TMICGSGTHGDADEAFGYYSKMLECGVKPNEVTFMGLLSACSHAGLVDKGIELFSRMIQE 376
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQ 432
+ I P++ HYGC++DL SRAG +DEA L+ +MP++PN V G+LL GCRIH + +
Sbjct: 377 YRIVPKVGHYGCVIDLLSRAGRLDEAEDLINSMPIEPNVIVWGALLGGCRIHKDFRRGER 436
Query: 433 VAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGV 492
VAQ L+ E+D E Y+ +A A+ R D A +M G+ K PG S ++++
Sbjct: 437 VAQHLL-ELDSEYTGSYV-YIAGAKASVGRVDDAANCWLRMQHKGIIKDPGCSKIEVHNT 494
Query: 493 LHDFVAGDST 502
+H+F D+T
Sbjct: 495 VHEFKECDNT 504
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 180/560 (32%), Positives = 313/560 (55%), Gaps = 36/560 (6%)
Query: 2 LVEEIIPANPATSSKALTT---RQIFSLLQIRNTTKTLFQIHSQIIINGF---SQKNYIL 55
L+ +P N AT++ + ++ + ++ + QIH+ I+ + + +
Sbjct: 6 LIATSLPQNHATATASFRNPPPEKLAVFIDNSHSVDEVLQIHAAILRHNLLIHPRYPVLN 65
Query: 56 AKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETE 115
KL Y + G + ++ +F +T +P ++ I + + +++ LY Q++ +
Sbjct: 66 LKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSQIN 125
Query: 116 PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCA 175
P+E+T+S +L C+ + G+ +H VL G + ++ T L+++Y GG+ V A
Sbjct: 126 PNEFTFSSILKSCST----KSGKLIHTHVLKFGLGLDPYVATGLVDIY-AKGGD--VVSA 178
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
+ +FD MP RS+VS +++ Y K+G+++ A +FD M R++VSW MI G +Q+G
Sbjct: 179 QKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPS 238
Query: 236 QALSLFNEM-RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
AL LF ++ + D++ +VAALSAC++IG L+ G+WIH +V + R + V +
Sbjct: 239 DALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSS----RIRLNVKV 294
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------- 343
ALI MY+ CG +EEA VF R++ V+W +MITG+A GY+Q+AL
Sbjct: 295 CTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITG 354
Query: 344 -----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEA 398
+TF+G L AC+H G V+EG Q FE M Q +GIKP+IEHYGC+V L RAG + A
Sbjct: 355 LQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRA 414
Query: 399 FSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYA 458
+ +++NM M+ + + S+L C++H L ++A+ L+ + +G L++N+YA
Sbjct: 415 YEIIKNMNMEADSVLWSSVLGSCKLHGEFMLGKEIAEYLIGQ--NISNSGIYVLLSNIYA 472
Query: 459 AAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITM 518
++ VA VR M + G+ K PG S ++I+ +H+F AGD + ++ IY L +++
Sbjct: 473 LVGDYEGVAKVRNLMKEKGIVKEPGISTIEIDNKVHEFRAGDREHLKSKEIYTMLRKMSE 532
Query: 519 QAMQEGYKPDISELFLGIEE 538
+ GY P+ + + +EE
Sbjct: 533 RIKSHGYVPNTNTVLHDLEE 552
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 183/557 (32%), Positives = 295/557 (52%), Gaps = 65/557 (11%)
Query: 7 IPANPATSSKALTTRQIFSLLQIR-NTTKTLFQIHSQIIINGFSQKNYILAKLLA----- 60
+P N T LT + I +LL NT L QIH+ I+ G IL K +
Sbjct: 6 LPIN--TPKTRLTEQTILTLLNSHCNTLSKLTQIHAFILKTGLQNNPLILTKFTSTSSNL 63
Query: 61 ---FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYL-YKQMIDKETEP 116
Y TS +H T + ++N +IR ++++ + + +L Y+ M+ P
Sbjct: 64 NSIHYATSFLFPPSHTTSTPTPSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTP 123
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCAR 176
+++T+ F+L CA G R G+ VHG V+ G+ +V + L+++Y C +G
Sbjct: 124 NKFTFPFVLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMY------CCLG--- 174
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
+ A K+FD+ P + V+W+ MI+G + G S +
Sbjct: 175 -----------------------EDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSR 211
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
A+ LF EM+ V D++ +V+ LSACA++G L+LGKW+ SYVE+ P V L N
Sbjct: 212 AVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKK----NIPKSVELCN 267
Query: 297 ALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------- 343
ALI M+A CG +++A +FR+M R VSWTS+I G A G +A+
Sbjct: 268 ALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITP 327
Query: 344 --LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
+ F+GVLSACSH G VD+GR +F M +N+ I P++EHYGCMVDL R G + EAF
Sbjct: 328 DDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEF 387
Query: 402 VQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAK 461
VQ MP +PN + +++ C +L ++++L+ +P + Y+ L++N+YA +
Sbjct: 388 VQKMPFEPNQIIWRTIITACHATGELKLGESISKELIKS-EPMHESNYV-LLSNIYAKLR 445
Query: 462 RWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAM 521
+W+ VR+ M G++K PG + +++N +++FVAGD ++ Q IY+ + E+ +
Sbjct: 446 QWEKKTKVREMMDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEIYEMVDEMGREIK 505
Query: 522 QEGYKPDISELFLGIEE 538
+ GY P S++ L I+E
Sbjct: 506 KAGYVPTTSQVLLDIDE 522
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 175/494 (35%), Positives = 278/494 (56%), Gaps = 26/494 (5%)
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
YV G + A VFE+ + +WN MI G+ S ++ L+++M+ + DE+T+
Sbjct: 238 YVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTF 297
Query: 122 SFLLSVCARCGLFREGEQVHGRV--LASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLL 178
+ +LS CA GLF G+ VHG++ L + + N N + +CG + AR +
Sbjct: 298 TSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVN--NALVTFYSKCGNIAVARRI 355
Query: 179 FDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQAL 238
FD+M + VVSWN++L GYV+ +D A ++F+EMP++N +SW M+SG G + AL
Sbjct: 356 FDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDAL 415
Query: 239 SLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNAL 298
LFN+MR V A++AC E+G LK GK +H ++ + G S NAL
Sbjct: 416 KLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSN----SAGNAL 471
Query: 299 IHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------------- 343
I MYA CG ++EA+ +F M ++VSW +MI+ + G+ +EAL
Sbjct: 472 ITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDR 531
Query: 344 LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQ 403
++FL VL+AC+H G VDEG ++FE M +++GI P +HY ++DL RAG + EA L++
Sbjct: 532 ISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIK 591
Query: 404 NMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRW 463
MP +P ++ ++L GCR + EL + A +L ++ P+ Y+ L++N Y+AA W
Sbjct: 592 TMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLF-KMTPQHDGTYI-LLSNTYSAAGCW 649
Query: 464 QDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQE 523
D A VR+ M GV+K PG SW++ +H F+ GD+ + +A +YK L + + +
Sbjct: 650 VDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGAKMRKL 709
Query: 524 GYKPDISELFLGIE 537
GY PD + +E
Sbjct: 710 GYVPDTKVVLHDME 723
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 165/339 (48%), Gaps = 23/339 (6%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENP--STAIWNQMIRGHARSETPEKSVYLYKQMIDKET- 114
L+A Y + L A F+ T + N +I +AR+ +V +++ ++ +
Sbjct: 94 LVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSL 153
Query: 115 EPDEYTYSFLLSVCARCG--LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV 172
PD+Y+++ LLS R Q+H VL SG + + L+ LY+
Sbjct: 154 RPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEAT 213
Query: 173 GCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNG 232
AR + D+MP + ++W +++ GYV+RGD+ A +F+E+ + V W MISG +G
Sbjct: 214 RDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSG 273
Query: 233 KSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV---EENFSVGREP 289
+ +A LF M RV LD+ + LSACA +G GK +H + + NF
Sbjct: 274 MAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFV---PE 330
Query: 290 VLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------ 343
+ +NNAL+ Y+ CG I A +F M ++ VSW ++++G+ + +A+
Sbjct: 331 AALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEM 390
Query: 344 -----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
L+++ ++S HGGF ++ + F M +KP
Sbjct: 391 PYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSE-NVKP 428
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 120/283 (42%), Gaps = 42/283 (14%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
+L+ YV S L A +VFE+ + W M+ G+ E ++ L+ +M + +P
Sbjct: 370 ILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPC 429
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
+YTY+ ++ C G + G+Q+HG ++ G+ + L+ +Y G V A L
Sbjct: 430 DYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCG---AVKEAHL 486
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
+F MP VSWN+ MIS Q+G R+A
Sbjct: 487 MFLVMPNIDSVSWNA-------------------------------MISALGQHGHGREA 515
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSV--GREPVLVSLN 295
L LF+ M + D+++ + L+AC G + G ++ +F + G +
Sbjct: 516 LELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHY----- 570
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVS-WTSMITGFAKQG 337
LI + G I EA + + M T S W ++++G G
Sbjct: 571 TRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSG 613
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 85/201 (42%), Gaps = 13/201 (6%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H I+ GF N L+ Y G + AH +F N + WN MI +
Sbjct: 451 QLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHG 510
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLAS-GYCSNVFIR 156
+++ L+ +M+ + PD ++ +L+ C GL EG + + G
Sbjct: 511 HGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHY 570
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVS-WNSLLKGYVKRGDID----GAWKIFD 211
T L++L +G +G AR L MP S W ++L G GD++ A ++F
Sbjct: 571 TRLIDLLGRAG---RIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFK 627
Query: 212 EMPHRN----VVSWTTMISGC 228
P + ++S T +GC
Sbjct: 628 MTPQHDGTYILLSNTYSAAGC 648
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 186/507 (36%), Positives = 276/507 (54%), Gaps = 60/507 (11%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
H + G Y+ L+ Y G + A KVF++ + WN MI G+++
Sbjct: 151 HCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFT 210
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
++++ L+ +M ++ EPDE T +L C G G V G VL N ++ + L
Sbjct: 211 KEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSAL 270
Query: 160 MNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVV 219
+++Y G+CG D+ A ++FD MP+++VV
Sbjct: 271 IDMY----GKCG------------------------------DLISARRVFDSMPNKDVV 296
Query: 220 SWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV 279
+W +I+G AQNG S +A+ LFN MR A D+V ++ LSAC+ IG L LGKW+ ++
Sbjct: 297 TWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETHA 356
Query: 280 EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYA 339
E + V V+ +ALI MYA CG +++A VF M +N VSW +MI+ A G A
Sbjct: 357 SEKGL--QHDVYVA--SALIDMYAKCGSLDDAVRVFESMPHKNEVSWNAMISALAFHGQA 412
Query: 340 QEAL-----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
QEAL +TF+GVLSAC H G VDEGRQ FE MN ++G+ P++EHY
Sbjct: 413 QEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKVEHY 472
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
CMVDL +RAGL+ EA+ L++ MP KP++ VLGSLL C+ NA++ +V Q L E++
Sbjct: 473 SCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSLLGACQRRRNADVGERVIQ-LFLEME 531
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
+ Y+ + + +YA +RW D A +R M + GV K PG SW+ I +H+F AGDS
Sbjct: 532 LSNSGNYV-ISSKIYANMRRWDDSAKMRVLMRQCGVSKTPGCSWIDIGAHVHEFHAGDSL 590
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDI 529
+ + IY+ L E + +EGY P+I
Sbjct: 591 HNHSMNIYQLLNE---EMKREGYIPNI 614
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 175/521 (33%), Positives = 288/521 (55%), Gaps = 58/521 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKTENPSTAIWNQMIRGHAR 95
Q H+ ++ +KL++F S G L A K+F + +NP I N MIRG+AR
Sbjct: 29 QAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYAR 88
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
S+ P ++V LY M+++ D YTY F+L+ CAR G + G + H VL +G+ S++F+
Sbjct: 89 SQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFV 148
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
L+ Y G GCA +FD+ R VV+WN ++ ++ +G + A+ + DEM
Sbjct: 149 INALIQFYHNCG---SFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEM-- 203
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
+ + +R D+V +V+ + ACA++G+L+ GK++
Sbjct: 204 -----------------------TKLDNLRP-----DEVTMVSLVPACAQLGNLERGKFL 235
Query: 276 HSYVEE--NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF 333
HSY +E F + + V L AL+ MYA CG I+ A VFR+M+ RN +W ++I G
Sbjct: 236 HSYSKELDKFEINCDLV---LETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGL 292
Query: 334 AKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
A G+ ++A+ +TF+ +L ACSH G VDEG F+ M + I+PR
Sbjct: 293 AMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPR 352
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
+EHYGC+VDL RA +D+A + ++NMP+K N + +LL CR + +LA ++ ++++
Sbjct: 353 MEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVI 412
Query: 439 AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVA 498
E++P+ Y+ L +N+YA +W +R++M G+ K PG SW+++NG++H FVA
Sbjct: 413 -ELEPDSCGRYVML-SNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVA 470
Query: 499 GDSTYKQASLIYKTLGEITMQA-MQEGYKPDISELFLGIEE 538
GD ++ Q IY + E+T + + G+ P + + IEE
Sbjct: 471 GDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEE 511
>gi|242073754|ref|XP_002446813.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
gi|241937996|gb|EES11141.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
Length = 547
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 171/494 (34%), Positives = 280/494 (56%), Gaps = 34/494 (6%)
Query: 32 TTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIR 91
T + L + H + SQ +Y+ +++ G +A +VF P+ + N MI+
Sbjct: 22 TFRDLLRAHGLAVRLCLSQSSYVATQIVHVCNGHGRAAHAARVFAHVPAPNLHLHNAMIK 81
Query: 92 GHARSETPEKSVYLYKQMIDKETEP---------DEYTYSFLLSVCARCGLFREGEQVHG 142
+A++ +V +Y +M+ +P D +TY FLL C + G QVH
Sbjct: 82 AYAQNHLHRDAVEVYVRMLRCLPDPSSSGGFSVGDRFTYPFLLKACGGLAASQLGRQVHA 141
Query: 143 RVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGD 202
V SG S+ ++ +L+ +Y G + AR +FD M + VSWN+L+ + + G
Sbjct: 142 HVARSGCESHAIVQNSLIEMYTRCGD---LSLARKVFDGMREKDAVSWNTLISAHARMGQ 198
Query: 203 IDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSA 262
+ A ++F MP + VVSWT ++SG G A+ +F +M+ D V++VA L A
Sbjct: 199 MRKARELFHSMPDKTVVSWTALVSGYTAVGDFAGAVEVFRQMQMEGFEPDDVSIVAVLPA 258
Query: 263 CAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRN 322
CA++G L+LG+WI++Y ++ +G+ + + NAL+ MYA CG IEEA +F M ++
Sbjct: 259 CAQLGALELGRWIYAYCNKHGMLGK----IYICNALMEMYAKCGCIEEALQLFHGMSEKD 314
Query: 323 TVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFF 366
+SW++ I G A G A+EA+ +TF+G+LSACSH G +DEG ++F
Sbjct: 315 VISWSTAIGGLAAHGRAREAVKLFEVMDREGRVMPNGITFVGLLSACSHAGLLDEGLRYF 374
Query: 367 ECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNN 426
+ M + +G++P +EHYGC+VDL R+G + A + MP+ P+ + GSLL CR H++
Sbjct: 375 DRMKEEYGVEPSVEHYGCVVDLLGRSGRIQRALDTIGGMPIPPDGKIWGSLLSACRSHSD 434
Query: 427 AELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSW 486
+ A A++LV E++PE G L ++ANVYAAA RW +VA+ R+++ RK PG S
Sbjct: 435 VDTAVVAAERLV-ELEPED-VGNLVMLANVYAAAGRWGNVASTRKEIRSRSTRKTPGCSM 492
Query: 487 VQINGVLHDFVAGD 500
++++ V+ +FVAG+
Sbjct: 493 IEVDNVVREFVAGE 506
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 166/471 (35%), Positives = 278/471 (59%), Gaps = 26/471 (5%)
Query: 59 LAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDE 118
+ + + G + NA KVF+++ WN +I G+ + EK++Y+YK M + +PD+
Sbjct: 198 IHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDD 257
Query: 119 YTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARL 177
T L+S C+ G G++ + V +G + + LM+++ +CG + AR
Sbjct: 258 VTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMF----SKCGDIHEARR 313
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
+FD++ R++VSW +++ GY + G +D + K+FD+M ++VV W MI G Q + + A
Sbjct: 314 IFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDA 373
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
L+LF EM+ + D++ ++ LSAC+++G L +G WIH Y+E+ +S+ V+L +
Sbjct: 374 LALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEK-YSLSLN---VALGTS 429
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------------- 343
L+ MYA CG I EA VF +Q RN++++T++I G A G A A+
Sbjct: 430 LVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPD 489
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
+TF+G+LSAC HGG + GR +F M + + P+++HY MVDL RAGL++EA L+
Sbjct: 490 EITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLM 549
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKR 462
++MPM+ + AV G+LL GCR+H N EL + A+KL+ E+DP + Y+ L+ +Y A
Sbjct: 550 ESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLL-ELDPSDSGIYV-LLDGMYGEANM 607
Query: 463 WQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTL 513
W+D R+ M + GV K PG S +++NG++ +F+ D + ++ IY L
Sbjct: 608 WEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRL 658
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 133/491 (27%), Positives = 222/491 (45%), Gaps = 94/491 (19%)
Query: 8 PANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV--TS 65
P N ++ + + SLL+ L QI +Q+IING + ++L+AF S
Sbjct: 41 PINWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSES 100
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDK---ETEPDEYTYS 122
YL + K+ + ENP+ WN IRG + SE P++S LYKQM+ E+ PD +TY
Sbjct: 101 RYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYP 160
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDD 181
L VCA L G + G VL + + +++ N + CG + AR +FD+
Sbjct: 161 VLFKVCADLRLSSLGHMILGHVLK----LRLELVSHVHNASIHMFASCGDMENARKVFDE 216
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
P R +VSWN L+ GY K G+ + +A+ ++
Sbjct: 217 SPVRDLVSWNCLINGYKKIGE-------------------------------AEKAIYVY 245
Query: 242 NEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHM 301
M V D V ++ +S+C+ +GDL GK + YV+EN G + + L NAL+ M
Sbjct: 246 KLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN---GLR-MTIPLVNALMDM 301
Query: 302 YASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY----------------------- 338
++ CG+I EA +F +++R VSWT+MI+G+A+ G
Sbjct: 302 FSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMI 361
Query: 339 --------AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGI 375
Q+AL +T + LSACS G +D G + + + +
Sbjct: 362 GGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI-EKYSL 420
Query: 376 KPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQ 435
+ +VD++++ G + EA S+ + + N +++ G +H +A A
Sbjct: 421 SLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGDASTAISYFN 479
Query: 436 KLV-AEIDPEQ 445
+++ A I P++
Sbjct: 480 EMIDAGIAPDE 490
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 172/380 (45%), Gaps = 72/380 (18%)
Query: 120 TYSF-----LLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGC 174
T+SF LLS+ +C L +Q+ +++ +G + F + L+ C +
Sbjct: 47 THSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAF-------CALSE 99
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
+R L D + KI + + N+ SW I G +++
Sbjct: 100 SRYL-------------------------DYSVKILKGIENPNIFSWNVTIRGFSESENP 134
Query: 235 RQALSLFNEMRR---ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL 291
+++ L+ +M R D CA++ LG I +V + R ++
Sbjct: 135 KESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLK----LRLELV 190
Query: 292 VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------- 343
++NA IHM+ASCG++E A VF + R+ VSW +I G+ K G A++A+
Sbjct: 191 SHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMES 250
Query: 344 -------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMD 396
+T +G++S+CS G ++ G++F+E + +N G++ I ++D+FS+ G +
Sbjct: 251 EGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN-GLRMTIPLVNALMDMFSKCGDIH 309
Query: 397 EAFSLVQNMPMKPNDAVLGSLLLG---CRIHNNAELASQVAQKLVAEIDPEQAAGYLALV 453
EA + N+ K +++ G C + + V++KL +++ + + A++
Sbjct: 310 EARRIFDNLE-KRTIVSWTTMISGYARCGLLD-------VSRKLFDDMEEKDVVLWNAMI 361
Query: 454 ANVYAAAKRWQDVAAVRQKM 473
AKR QD A+ Q+M
Sbjct: 362 GGS-VQAKRGQDALALFQEM 380
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 124/281 (44%), Gaps = 38/281 (13%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
+++ Y G L + K+F+ E +WN MI G +++ + ++ L+++M T+PD
Sbjct: 329 MISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPD 388
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
E T LS C++ G G +H + NV + T+L+++
Sbjct: 389 EITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDM--------------- 433
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
Y K G+I A +F + RN +++T +I G A +G + A
Sbjct: 434 -------------------YAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTA 474
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
+S FNEM A + D++ + LSAC G ++ G+ S ++ F++ + S+
Sbjct: 475 ISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSI--- 531
Query: 298 LIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAKQG 337
++ + G +EEA + M + W +++ G G
Sbjct: 532 MVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHG 572
>gi|449449649|ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 589
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 175/509 (34%), Positives = 281/509 (55%), Gaps = 30/509 (5%)
Query: 36 LFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHAR 95
L QIH+ + NG +++ KLL L A +F++ PS ++N+ I+ +
Sbjct: 4 LKQIHAYSLRNGLDHTKFLIEKLLQL----PDLPYACTLFDQIPKPSVYLYNKFIQTFSS 59
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
P + LY QM + P++Y+++FL CA G+ +H SG+ S++F
Sbjct: 60 IGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFASDMFA 119
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
T L+++Y G + AR LFD+MP R + +WNSL+ GY + G ++ A ++F++MP
Sbjct: 120 MTALLDMYAKLGM---LRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFNKMPV 176
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR-VGLDQVALVAALSACAEIGDLKLGKW 274
RNV+SWT +ISG AQNGK +AL +F + + ++V++ + L AC+++G L +GK
Sbjct: 177 RNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDIGKR 236
Query: 275 IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGF 333
I +Y N V +NA++ ++A CG IEEA VF ++ +RN SW +MI G
Sbjct: 237 IEAYARNNGFFKNAYV----SNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGL 292
Query: 334 AKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
A G +AL +TF+G+L AC+HGG V EGRQ FE M + + P+
Sbjct: 293 AVHGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESMESKFQVAPK 352
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
+EHYGC+VDL RAG + EA++L+QNMPM P+ + G+LL C H N EL A+ L
Sbjct: 353 LEHYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVELGEVAAESLF 412
Query: 439 AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVA 498
+++P Y+ +++N+YA A W VA +R+ M + K G S++++ +H+F+
Sbjct: 413 -KLEPWNPGNYV-ILSNIYALAGDWSGVARLRKMMKGGHITKRAGYSYIEVGDGIHEFIV 470
Query: 499 GDSTYKQASLIYKTLGEITMQAMQEGYKP 527
D + + L +T+ + P
Sbjct: 471 EDRITSRCVQPFLLLLHVTLAPQPVSFPP 499
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 176/521 (33%), Positives = 277/521 (53%), Gaps = 65/521 (12%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH I +G ++ L+ Y G + AHK+FE+ A WN +I G++ +
Sbjct: 242 QIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNS 301
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ + +M + +P+ T +L CA +G+Q+HG + SG+ SN +
Sbjct: 302 QHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGN 361
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+N+Y K G+++ A+K+F+ MP +N
Sbjct: 362 ALVNMY----------------------------------AKCGNVNSAYKLFERMPKKN 387
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VV+W +ISG +Q+G +AL+LF EM+ + D A+V+ L ACA L+ GK IH
Sbjct: 388 VVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHG 447
Query: 278 YV-----EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
Y E N VG L+ +YA CG + A +F +M ++ VSWT+MI
Sbjct: 448 YTIRSGFESNVVVG---------TGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILA 498
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
+ G+ ++AL + F +L+ACSH G VD+G Q+F+CM ++G+ P
Sbjct: 499 YGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAP 558
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
++EHY C+VDL RAG +DEA +++NM ++P+ V G+LL CRIH N EL Q A+ L
Sbjct: 559 KLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHL 618
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
E+DP+ AGY L++N+YA A+RW+DVA +R+ M + GV+K PG S V ++ + F+
Sbjct: 619 F-ELDPDN-AGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFL 676
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
GD T+ Q+ IY L + Q + GY P+ + +EE
Sbjct: 677 VGDRTHPQSEQIYAMLEILYEQMRKAGYVPNTNLALQDVEE 717
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 202/422 (47%), Gaps = 69/422 (16%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H II GF + L + Y G L NA +VF++ WN +I G++++
Sbjct: 141 KVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNG 200
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
P +++ L+ +M +P+ T ++ VCA +G+Q+H + SG S+V +
Sbjct: 201 QPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVN 260
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L+N+Y +CG V A LF+ MP R V SWN+++ GY
Sbjct: 261 GLVNMY----AKCGNVNTAHKLFERMPIRDVASWNAIIGGY------------------- 297
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
+ N + +AL+ FN M+ + + + +V+ L ACA + L+ G+ IH
Sbjct: 298 ------------SLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIH 345
Query: 277 SYV-----EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMIT 331
Y E N VG NAL++MYA CG + AY +F +M ++N V+W ++I+
Sbjct: 346 GYAIRSGFESNDVVG---------NALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIIS 396
Query: 332 GFAKQGYAQEALLTFL---------------GVLSACSHGGFVDEGRQFFECMNQNWGIK 376
G+++ G+ EAL F+ VL AC+H +++G+Q ++ G +
Sbjct: 397 GYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRS-GFE 455
Query: 377 PRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAV-LGSLLLGCRIHNNAELASQVAQ 435
+ +VD++++ G ++ A L + MP + D V +++L IH + E A +
Sbjct: 456 SNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQ--DVVSWTTMILAYGIHGHGEDALALFS 513
Query: 436 KL 437
K+
Sbjct: 514 KM 515
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 169/354 (47%), Gaps = 63/354 (17%)
Query: 75 FEKTENPSTAI-WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGL 133
F +T+ + A+ W + I G+ ++ K++ LY QM PD+ + ++ C
Sbjct: 76 FTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSD 135
Query: 134 FREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSL 193
+ G +VH ++A G+ S+V + T L ++Y
Sbjct: 136 LQAGRKVHEDIIARGFESDVIVGTALASMY------------------------------ 165
Query: 194 LKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQ 253
K G ++ A ++FD MP R+VVSW +I+G +QNG+ +AL+LF+EM+ + +
Sbjct: 166 ----TKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNS 221
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
LV+ + CA + L+ GK IH Y G E ++ + N L++MYA CG + A+
Sbjct: 222 STLVSVMPVCAHLLALEQGKQIHCYA---IRSGIESDVLVV-NGLVNMYAKCGNVNTAHK 277
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGF 358
+F +M R+ SW ++I G++ EAL +T + VL AC+H
Sbjct: 278 LFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFA 337
Query: 359 VDEGRQFFECMNQNWGIKPRIEHY----GCMVDLFSRAGLMDEAFSLVQNMPMK 408
+++G+Q + I+ E +V+++++ G ++ A+ L + MP K
Sbjct: 338 LEQGQQI-----HGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKK 386
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 177/517 (34%), Positives = 289/517 (55%), Gaps = 55/517 (10%)
Query: 39 IHSQIIINGFSQKNYI-LAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++++++ + S ++ + L+ Y + G+L A ++F++ WN MI G+A+S
Sbjct: 180 VNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSG 239
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGL-FREGEQVHGRVLASGYCSNVFIR 156
E+++ +++M + P+ T +LS CA+ G + G V + G SN+
Sbjct: 240 RVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNI--- 296
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
RL+ N L+ YVK GD++ A +F+++ +
Sbjct: 297 -------------------RLV------------NGLIDMYVKCGDLEEASNLFEKIQDK 325
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
NVVSW MI G ++AL LF M ++ + + V ++ L ACA +G L LGKW+H
Sbjct: 326 NVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVH 385
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+YV++N + V +L +LI MYA CG++ A +F M ++ +W +MI+GFA
Sbjct: 386 AYVDKNMKSMKNTV--ALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMH 443
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G+ AL +TF+GVL+AC H G + GR++F M Q++ + P++ H
Sbjct: 444 GHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPH 503
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YGCM+DLF RAGL DEA +LV+NM MKP+ A+ SLL CRIH ELA VA+ L E+
Sbjct: 504 YGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLF-EL 562
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+PE + Y+ L++N+YA A RW+DVA +R ++ ++K PG S ++++ V+H+F+ GD
Sbjct: 563 EPENPSAYV-LLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDK 621
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ Q++ IYK L EI M+ + G+ PD SE+ ++E
Sbjct: 622 VHPQSNEIYKMLDEIDMRLEKAGFVPDTSEVLYDMDE 658
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 158/451 (35%), Positives = 250/451 (55%), Gaps = 27/451 (5%)
Query: 9 ANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--G 66
++P+ K + +LL T +TL QIHSQII G ++ L+KL+ F S G
Sbjct: 17 SDPSPPYKLVHDHPSLTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHG 76
Query: 67 YLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLS 126
L A +F+ NP+ IWN MIRG + SE+P ++ Y MI TEP+EYT+ +
Sbjct: 77 DLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFK 136
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARS 186
C + EG+QVH VL G N F+ T+L+N+Y +G ARL+FD R
Sbjct: 137 SCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVN---ARLVFDKSSMRD 193
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
VS+ +L+ GY +G +D A ++FDE+P R+VVSW MISG AQ+G+ +A++ F EMRR
Sbjct: 194 AVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRR 253
Query: 247 ARVGLDQVALVAALSACAEIG-DLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC 305
A+V + +++ LSACA+ G L+LG W+ S++E+ +G LV N LI MY C
Sbjct: 254 AKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDR-GLGSNIRLV---NGLIDMYVKC 309
Query: 306 GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVL 350
G++EEA +F K+Q +N VSW MI G+ +EAL +TFL +L
Sbjct: 310 GDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSIL 369
Query: 351 SACSHGGFVDEGRQFFECMNQNW-GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKP 409
AC++ G +D G+ +++N +K + + ++D++++ G + A + M K
Sbjct: 370 PACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTK- 428
Query: 410 NDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
+ A +++ G +H + + A + ++ +E
Sbjct: 429 SLATWNAMISGFAMHGHTDTALGLFSRMTSE 459
>gi|359489007|ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 663
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 184/490 (37%), Positives = 291/490 (59%), Gaps = 30/490 (6%)
Query: 19 TTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFE 76
T++ + S+ + T + L IH+ +LAK+ F S G L A ++F
Sbjct: 181 TSQSLASMAEACLTMQALKLIHALAFRANLHHHALVLAKIFRFAAVSPNGCLHYADRLFS 240
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR----CG 132
+ P+T +N +IRG+++S +P +SV L+ QM +PD +T++FLL +R
Sbjct: 241 QIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLP 300
Query: 133 LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNS 192
L +++HG VL G+C ++F+ L++LY G A +F++M VVSW+
Sbjct: 301 LIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAA---AHQVFNEMVGADVVSWSG 357
Query: 193 LLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLD 252
L+ +V+ G+++ A ++F EMP R+VVSWT M+SG AQ +SR+AL LF EMR V D
Sbjct: 358 LVVAHVRAGELELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPD 417
Query: 253 QVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAY 312
+VA+V+ +SAC +GDL+ G +H Y++EN G +VSL NALI MYA CG ++ A+
Sbjct: 418 EVAMVSVISACTSLGDLETGFEVHRYIDEN-GFGW---MVSLCNALIDMYAKCGCMDLAW 473
Query: 313 GVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGG 357
VF M+R++ ++W SMI+ A G A++A +TFL +L+A +H G
Sbjct: 474 QVFNNMERKSLITWNSMISACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALLTAYTHKG 533
Query: 358 FVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSL 417
+VD+G FE M +++G++ +EHYGCMVD+ RAG ++EA+ L+ +M M ND V G+L
Sbjct: 534 WVDDGYGLFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGAL 593
Query: 418 LLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMG 477
L CRI+ + E+ +V +KL+ E+ P++ GY L+ ++Y AA R + +R+ M G
Sbjct: 594 LAACRIYGDVEMGERVLKKLI-ELKPDE-GGYYILLRDIYVAAGRRAEAIELRRAMDVNG 651
Query: 478 VRKPPGQSWV 487
+K G SWV
Sbjct: 652 AKKTLGCSWV 661
>gi|297810935|ref|XP_002873351.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319188|gb|EFH49610.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1281
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 184/483 (38%), Positives = 277/483 (57%), Gaps = 35/483 (7%)
Query: 50 QKNYILAKLLAFYVTSGYLIN-AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQ 108
+NY+LA V + +N A+K+ K NP WN +IRG + S+ PEKS+ +Y Q
Sbjct: 791 DRNYLLA------VDATSDVNYAYKLLSKLSNPPDYGWNFVIRGFSNSKNPEKSIRVYIQ 844
Query: 109 MIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGG 168
++ PD TY FLL +R G +H V+ +G ++FI L+++Y G
Sbjct: 845 ILRSGFSPDHMTYPFLLKSSSRLSNREIGGSLHCSVVKTGLEWDLFISNTLIHMY---GS 901
Query: 169 ECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGC 228
AR LFD+MP +++V+WNS+L Y K GD+ A +FDEM R+VV+W++MI G
Sbjct: 902 FRDKASARKLFDEMPYKNLVTWNSILDSYAKSGDVVSARLVFDEMTMRDVVTWSSMIDGY 961
Query: 229 AQNGKSRQALSLFNE-MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGR 287
++G+ +AL +F++ MR ++V +V+ L ACA +G+L GK +H Y+ +
Sbjct: 962 VKSGEYNEALEIFDQMMRMGSSKANEVTMVSVLCACAHLGELNRGKVVHRYILD----VH 1017
Query: 288 EPVLVSLNNALIHMYASCGEIEEAYGVF--RKMQRRNTVSWTSMITGFAKQGYAQEALL- 344
P+ V L +LI MYA CG I +A+GVF +++ + + W +MI G A G+ +E+LL
Sbjct: 1018 LPLTVILQTSLIDMYAKCGSIGDAWGVFCGASVKKTDALMWNAMIGGLASHGFIRESLLL 1077
Query: 345 --------------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFS 390
TFL +L+ACSHGG V E FF + ++ G +P+ EHY CMVD+ S
Sbjct: 1078 FHKMRESEIDPDEITFLCLLAACSHGGLVKEAWHFFTSLKES-GAEPKSEHYACMVDVLS 1136
Query: 391 RAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYL 450
RAGL+ +A + M +KP +VLG+L GC H N ELA V +KL+ E+ P Y+
Sbjct: 1137 RAGLVKDAHDFISEMLIKPTGSVLGALFNGCINHGNLELAETVGKKLI-ELQPHNDGRYV 1195
Query: 451 ALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIY 510
L ANVYA K++ ++R+ M K GV+K G S +++NG H F+A D T+ + IY
Sbjct: 1196 GL-ANVYAINKQFGAARSMREAMEKKGVKKIAGHSIIKLNGTSHRFIAHDQTHFHSDKIY 1254
Query: 511 KTL 513
L
Sbjct: 1255 AVL 1257
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 115/256 (44%), Gaps = 11/256 (4%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+H ++ G +I L+ Y + +A K+F++ + WN ++ +A+S
Sbjct: 875 SLHCSVVKTGLEWDLFISNTLIHMYGSFRDKASARKLFDEMPYKNLVTWNSILDSYAKS- 933
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRV--LASGYCSNVFI 155
V + + D+ T D T+S ++ + G + E ++ ++ + S + V +
Sbjct: 934 ---GDVVSARLVFDEMTMRDVVTWSSMIDGYVKSGEYNEALEIFDQMMRMGSSKANEVTM 990
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIF--DEM 213
+ L + G R + D +V+ SL+ Y K G I AW +F +
Sbjct: 991 VSVLCACAHLGELNRGKVVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWGVFCGASV 1050
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK 273
+ + W MI G A +G R++L LF++MR + + D++ + L+AC+ G +K
Sbjct: 1051 KKTDALMWNAMIGGLASHGFIRESLLLFHKMRESEIDPDEITFLCLLAACSHGGLVKEAW 1110
Query: 274 WIHSYVEENFSVGREP 289
+ ++E+ G EP
Sbjct: 1111 HFFTSLKES---GAEP 1123
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 115/272 (42%), Gaps = 10/272 (3%)
Query: 86 WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVL 145
+ I G R+E ++ + L++ PD Y L+ + E + + ++
Sbjct: 582 YTAAIEGLIRNEGVDRGLELFRDTCANGHCPDVIAYHVLIKALCKACRTTEADNLFNEMV 641
Query: 146 ASGYCSNVFIRTNLMNLYLMSGG-ECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDID 204
+ G +V ++++ + G + G+ C +++D V+++ SL+ G
Sbjct: 642 SKGLKPSVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASRRPS 701
Query: 205 GAWKIFDEMPHR----NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
A ++EM + N +++ +I G G S +AL F EM + D ++ +
Sbjct: 702 EAISRWNEMKGKDCYPNRITFMALIQGLCNCGWSSEALVYFREMEEKEMEPDSAVYLSLV 761
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
S+ ++ G I E GR PV V N L+ + A+ ++ AY + K+
Sbjct: 762 SSFLSSENISAGFGI---FREMVHKGRFPVSVD-RNYLLAVDAT-SDVNYAYKLLSKLSN 816
Query: 321 RNTVSWTSMITGFAKQGYAQEALLTFLGVLSA 352
W +I GF+ ++++ ++ +L +
Sbjct: 817 PPDYGWNFVIRGFSNSKNPEKSIRVYIQILRS 848
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 127/288 (44%), Gaps = 21/288 (7%)
Query: 72 HKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA-R 130
H + + PS ++N +I G + E+S+ L +M D EP +YT + + A R
Sbjct: 463 HDIVQNGLIPSLMMYNNIIEGMCKEGRSEESLKLLAEMKDAGVEPSQYTLNCIYGCLAER 522
Query: 131 CGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPA----RS 186
C F + ++ G+ + T L+ L G+ C + DD+ R
Sbjct: 523 CD-FAGALDLLKKMRFYGFEPWIKHTTCLVK-KLCENGKAVDACKYI--DDVAGEGFLRH 578
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHR----NVVSWTTMISGCAQNGKSRQALSLFN 242
+VS+ + ++G ++ +D ++F + +V+++ +I + ++ +A +LFN
Sbjct: 579 MVSYTAAIEGLIRNEGVDRGLELFRDTCANGHCPDVIAYHVLIKALCKACRTTEADNLFN 638
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMY 302
EM + + + + G++ G S + + + P +++ +LIH
Sbjct: 639 EMVSKGLKPSVATYNSMIDGWCKEGEIDRGL---SCIVRMYEDEKNPDVITY-TSLIHGL 694
Query: 303 ASCGEIEEAYGVFRKMQRR----NTVSWTSMITGFAKQGYAQEALLTF 346
+ EA + +M+ + N +++ ++I G G++ EAL+ F
Sbjct: 695 CASRRPSEAISRWNEMKGKDCYPNRITFMALIQGLCNCGWSSEALVYF 742
>gi|255586940|ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525897|gb|EEF28314.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 188/533 (35%), Positives = 308/533 (57%), Gaps = 31/533 (5%)
Query: 6 IIPANPATSSKALTTRQIFSLLQIRNTT-KTLFQIHSQIIINGFSQKNYILAKLLAFYVT 64
++P +PAT SK ++ + S+L TT K L +IHSQ+I G ++ +++LAF +
Sbjct: 7 LLPPSPATISKLISDQTYLSMLDKNCTTMKDLKKIHSQLIKTGLAKDTNAASRILAFCAS 66
Query: 65 SGYLIN-AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMI-DKETEPDEYTYS 122
IN A+ VF + +NP+ WN +IRG +RS P+ S+ LY M+ +P TY
Sbjct: 67 PAGDINYAYLVFVQIQNPNIFAWNTIIRGFSRSSVPQNSISLYIDMLLTSPVQPQRLTYP 126
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGC-ARLLFDD 181
+ A+ L EG Q+HG+++ G ++ FIR ++ +Y+ CG AR +FD
Sbjct: 127 SVFKAFAQLDLASEGAQLHGKMIKLGLENDSFIRNTILFMYV----NCGFTSEARKVFDR 182
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
+V+WN+++ G K G +D + ++FD+M RN VSW +MISG +NG+ AL LF
Sbjct: 183 GMDFDIVAWNTMIMGVAKCGLVDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALELF 242
Query: 242 NEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY-VEENFSVGREPVLVSLNNALIH 300
+M+ R+ + +V+ L+ACA +G ++ G+WIH Y V++ F + P++V+ A+I
Sbjct: 243 QKMQVERIEPSEFTMVSLLNACACLGAIRQGEWIHDYMVKKKFELN--PIVVT---AIID 297
Query: 301 MYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LT 345
MY+ CG I++A VF+ RR W SMI G A G EAL ++
Sbjct: 298 MYSKCGSIDKAVQVFQSAPRRGLSCWNSMILGLAMNGQENEALQLFSVLQSSDLRPDDVS 357
Query: 346 FLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
F+ VL+AC H G VD+ + +F M + IKP I+H+ CMVD+ RAGL++EA L+++M
Sbjct: 358 FIAVLTACDHTGMVDKAKDYFLLMRDKYKIKPGIKHFSCMVDVLGRAGLLEEAEELIRSM 417
Query: 406 PMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQD 465
+ P+ + GSLL C + N ++A + A L+ E++P +++ ++ LVAN YAAA +++
Sbjct: 418 HVDPDAIIWGSLLWSCCKYGNIKMAKRAANHLI-ELNPSESSSFV-LVANAYAAANNFEE 475
Query: 466 VAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITM 518
R + + + K PG S +++ G +H+FVAG + + IY+ L +T+
Sbjct: 476 ALKERLTLKENHIGKEPGCSCIEVGGEVHEFVAGGRAHPEIKEIYRVLDVLTL 528
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 177/497 (35%), Positives = 274/497 (55%), Gaps = 26/497 (5%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
++ + G ++ A K+F++ W+ +I ++E E+++ + M D
Sbjct: 181 MIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVD 240
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCAR 176
E LS CA + G+ +H L G S + ++ L+ +Y +CG + AR
Sbjct: 241 EVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMY----SKCGDIMVAR 296
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
LFD+ ++SWNS++ GY+K +D A IFD MP ++VVSW++MISG AQN +
Sbjct: 297 KLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDE 356
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
L+LF EM+ + D+ LV+ +SACA + L+ GKW+H+Y++ N + V L
Sbjct: 357 TLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRN----GLTINVILGT 412
Query: 297 ALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------- 343
LI MY CG +E A VF M + +W ++I G A G + +L
Sbjct: 413 TLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTP 472
Query: 344 --LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
+TF+GVL AC H G VDEG+ F M + I+P ++HYGCMVDL RAG + EA L
Sbjct: 473 NEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEEL 532
Query: 402 VQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAK 461
+ MPM P+ A G+LL C+ H ++E+ +V +KL+ E+ P+ G+ L++N+YA+
Sbjct: 533 LNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLI-ELQPDH-DGFHVLLSNIYASKG 590
Query: 462 RWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAM 521
+W DV +R M K V K PG S ++ NGV+H+F+AGD T+ I L E+ M+
Sbjct: 591 KWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLK 650
Query: 522 QEGYKPDISELFLGIEE 538
EGY PDI+E+ L ++E
Sbjct: 651 LEGYTPDINEVLLDVDE 667
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 205/412 (49%), Gaps = 62/412 (15%)
Query: 43 IIINGFSQKNYILAKLLAF--YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPE 100
+++ GF ++ Y ++L+ F + ++ ++F EN + +WN MIR + ++ +P
Sbjct: 1 MLLTGFIRETYAASRLIKFSTHFPFIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPH 60
Query: 101 KSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLM 160
+ LYK M+ D YTY L+ C+ E +QVH VL G+ S+V++R L+
Sbjct: 61 FAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLI 120
Query: 161 NLY--------------------------LMSGG-ECG-VGCARLLFDDMPARSVVSWNS 192
N + +++G E G V A+ ++ MP RS+++ NS
Sbjct: 121 NCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNS 180
Query: 193 LLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLD 252
++ + RG + A K+FDEM +++V+W+ +I+ QN +A+ F M + V +D
Sbjct: 181 MIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVD 240
Query: 253 QVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAY 312
+V V+ALSACA + + +GK IHS + +G E ++L NALI+MY+ CG+I A
Sbjct: 241 EVVAVSALSACANLLVVNMGKLIHSL---SLKIGTES-YINLQNALIYMYSKCGDIMVAR 296
Query: 313 GVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQN 372
+F + + +SW SMI+G+ K C+ VD + F+ M +
Sbjct: 297 KLFDEAYLLDLISWNSMISGYLK-----------------CN---LVDNAKAIFDSMPEK 336
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM---KPNDAVLGSLLLGC 421
+ + M+ +++ L DE +L Q M M KP++ L S++ C
Sbjct: 337 -----DVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISAC 383
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 5/166 (3%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H+ I NG + + L+ Y+ G + A +VF + WN +I G A +
Sbjct: 395 VHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGL 454
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE-QVHGRVLASGYCSNVFIRT 157
E S+ ++ M P+E T+ +L C GL EG+ + + NV
Sbjct: 455 VESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYG 514
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMP-ARSVVSWNSLLKGYVKRGD 202
+++L +G + A L + MP V +W +LL K GD
Sbjct: 515 CMVDLLGRAG---KLQEAEELLNRMPMTPDVATWGALLGACKKHGD 557
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 174/516 (33%), Positives = 281/516 (54%), Gaps = 56/516 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QI II G+ + + LL+ Y G L +AH+VFEK + WN MI + + E
Sbjct: 434 QIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHE 493
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+ ++ ++ ++ + +P+ T++ +L+VC G+ VH ++ +G S++ +
Sbjct: 494 QYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVS- 552
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
N+L+ +V GD+ A +F++MP R+
Sbjct: 553 ---------------------------------NALVSMFVNCGDLMSAKNLFNDMPKRD 579
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+VSW T+I+G Q+GK++ A F M+ + + D++ L+ACA L G+ +H+
Sbjct: 580 LVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHA 639
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
+ E + VLV LI MY CG IE+A+ VF K+ ++N SWTSMI G+A+ G
Sbjct: 640 LITE--AAFDCDVLVG--TGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHG 695
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+EAL +TF+G LSAC+H G ++EG F+ M + + I+PR+EHY
Sbjct: 696 RGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKE-FNIEPRMEHY 754
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
GCMVDLF RAGL++EA + M ++P+ V G+LL C++H N ELA + AQK + E+D
Sbjct: 755 GCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKL-ELD 813
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P G +++N+YAAA W++VA +R+ M+ GV K PGQSW++++G +H F + D T
Sbjct: 814 PNDN-GVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKT 872
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ Q I+ L + M+ Q GY PD + +E+
Sbjct: 873 HPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVED 908
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 219/455 (48%), Gaps = 62/455 (13%)
Query: 14 SSKALTTRQIFS-LLQIRNTTKTLF---QIHSQIIINGFSQKNYILAKLLAFYVTSGYLI 69
SS RQ +S LLQ+ K L +I++ I +G ++ L+ Y G I
Sbjct: 103 SSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTI 162
Query: 70 NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
+A ++F+ WN ++ G+ + E++ L++QM+ +PD+ T+ +L+ CA
Sbjct: 163 SAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACA 222
Query: 130 RCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVS 189
+G +++ +L +G+ +++F+ T L+N++
Sbjct: 223 DARNVDKGRELYNLILKAGWDTDLFVGTALINMH-------------------------- 256
Query: 190 WNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARV 249
+K GDI A K+FD +P R++V+WT+MI+G A++G+ +QA +LF M V
Sbjct: 257 --------IKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGV 308
Query: 250 GLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIE 309
D+VA V+ L AC L+ GK +H+ ++E VG + + + A++ MY CG +E
Sbjct: 309 QPDKVAFVSLLRACNHPEALEQGKKVHARMKE---VGWD-TEIYVGTAILSMYTKCGSME 364
Query: 310 EAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALL---------------TFLGVLSACS 354
+A VF ++ RN VSWT+MI GFA+ G EA L TF+ +L ACS
Sbjct: 365 DALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACS 424
Query: 355 HGGFVDEGRQFFE-CMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAV 413
+ G+Q + + +G R+ ++ ++++ G + +A + + + K N
Sbjct: 425 SPSALKRGQQIQDHIIEAGYGSDDRVR--TALLSMYAKCGSLKDAHRVFEKIS-KQNVVA 481
Query: 414 LGSLLLGCRIHNNAELASQVAQKLVAE-IDPEQAA 447
+++ H + A Q L+ E I P +
Sbjct: 482 WNAMITAYVQHEQYDNALATFQALLKEGIKPNSST 516
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 178/507 (35%), Positives = 289/507 (57%), Gaps = 34/507 (6%)
Query: 43 IIINGFSQKNYIL-AKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEK 101
++ N +N I ++ Y G L +A + F++ S WN M +A+ E P++
Sbjct: 182 VLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKE 241
Query: 102 SVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMN 161
++ L+ QM+++ PD+ T+ +S C+ G + + + N F++T L++
Sbjct: 242 ALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLD 301
Query: 162 LYLMSGGECGVGCARLLFDDMPA-RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVS 220
++ G + AR +FD++ + R+ V+WN ++ Y + G + A ++FD MP R+VVS
Sbjct: 302 MHAKFGN---LEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVS 358
Query: 221 WTTMISGCAQNGKSRQALSLFNEMRRA-RVGLDQVALVAALSACAEIGDLKLGKWIHSYV 279
W +MI+G AQNG+S ++ LF EM + D+V + + LSAC IG LKL W+ V
Sbjct: 359 WNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIV 418
Query: 280 -EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
E+N +G +S N+LI MY+ CG + +A+ +F+ M R+ VS+ ++I+GFA G+
Sbjct: 419 REKNIKLG-----ISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGH 473
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
+EA+ +T++GVL+ACSH G ++EG+ F+ + P ++HY
Sbjct: 474 GKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQA-----PTVDHYA 528
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
CMVDL RAG +DEA L+Q+MPMKP+ V GSLL RIH L A KL E++P
Sbjct: 529 CMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLF-ELEP 587
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
+ Y+ L++N+YA+ RW+DV VR+ M K G++K G SWV+ G +H F GD ++
Sbjct: 588 QNLGNYV-LLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSH 646
Query: 504 KQASLIYKTLGEITMQAMQEGYKPDIS 530
+Q+ IYK L E+ + + G+ D S
Sbjct: 647 EQSKDIYKLLAELERKMKRVGFVADKS 673
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/462 (25%), Positives = 202/462 (43%), Gaps = 89/462 (19%)
Query: 22 QIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAH-----KVFE 76
++ +L + + L Q H ++ N NY ++ LL + ++AH +F
Sbjct: 3 ELVALASKISNIRQLRQFHGHLVHNSLHSHNYWVSLLL----INCTRLHAHPAYVDSIFT 58
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCG-LFR 135
+ +P ++++ M++ ++R + V L+K P + Y +L+ + + G LF
Sbjct: 59 SSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGNLF- 117
Query: 136 EGEQVHGRVLASGYCSNVFIRTNLMNLYLMSG--------------------GECGVGC- 174
H VL G+ + FIR ++++Y +G GC
Sbjct: 118 -----HAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCW 172
Query: 175 -------ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISG 227
A +LF+ MPAR++++W S++ GY K GD++ A + FDEMP R+VVSW M S
Sbjct: 173 KSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSA 232
Query: 228 CAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE------ 281
AQ ++AL+LF++M + D V +S+C+ IGD L I +++
Sbjct: 233 YAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLN 292
Query: 282 ---------------NFSVGREPV--LVSLNNA-----LIHMYASCGEIEEAYGVFRKMQ 319
N + R L S NA +I Y G++ A +F M
Sbjct: 293 SFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMP 352
Query: 320 RRNTVSWTSMITGFAKQGYA----------------QEALLTFLGVLSACSHGGFVDEGR 363
+R+ VSW SMI G+A+ G + Q +T VLSAC H G +
Sbjct: 353 KRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSY 412
Query: 364 QFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
+ + + IK I + ++ ++S+ G + +A + Q M
Sbjct: 413 WVLDIVREK-NIKLGISGFNSLIFMYSKCGSVADAHRIFQTM 453
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 174/517 (33%), Positives = 293/517 (56%), Gaps = 25/517 (4%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++++ I +G + +++ L+ Y+ + A ++F++ + + N M + R
Sbjct: 257 KVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQG 316
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ ++ M+D PD + +S C++ G+ HG VL +G+ S I
Sbjct: 317 LTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICN 376
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y+ + A +FD M ++VV+WNS++ GYV+ G++D AW+ F+ MP +N
Sbjct: 377 ALIDMYMKCHRQ---DTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKN 433
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRAR-VGLDQVALVAALSACAEIGDLKLGKWIH 276
+VSW T+ISG Q +A+ +F M+ V D V +++ SAC +G L L KWI+
Sbjct: 434 IVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY 493
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
Y+E+N G + + V L L+ M++ CG+ E A +F + R+ +WT+ I A
Sbjct: 494 YYIEKN---GIQ-LDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMA 549
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G A+ A+ + F+G L+ACSHGG V +G++ F M + G+ P H
Sbjct: 550 GNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVH 609
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YGCMVDL RAGL++EA L+++MPM+PND + SLL CR+ N E+A+ A+K+ +
Sbjct: 610 YGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQV-L 668
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
PE+ Y+ L++NVYA+A RW D+A VR M + G+RKPPG S +QI G H+F +GD
Sbjct: 669 APERTGSYV-LLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDE 727
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++ + I L E++ +A G+ PD+S + + ++E
Sbjct: 728 SHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDE 764
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 194/428 (45%), Gaps = 59/428 (13%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
M++ P+ +++ T+ S L+ T L H + G + KL+A
Sbjct: 13 MVLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVA 72
Query: 61 FYVTSGY---LINAHKVFEKTENPSTA-IWNQMIRGHARSETPEKSVYLYKQMIDKETEP 116
G L A +VFE +E+ T ++N +IRG+A S +++ L+ +M++ P
Sbjct: 73 RSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISP 132
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCA 175
D+YT+ F LS CA+ G Q+HG ++ GY ++F++ +L++ Y ECG + A
Sbjct: 133 DKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFY----AECGELDSA 188
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
R +FD+M R+VVSW S++ GY +R A +F
Sbjct: 189 RKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLF------------------------- 223
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
F +R V + V +V +SACA++ DL+ G+ +++++ N + ++VS
Sbjct: 224 -----FRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI-RNSGIEVNDLMVS-- 275
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------ 343
AL+ MY C I+ A +F + N +M + + +QG +EAL
Sbjct: 276 -ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR 334
Query: 344 ---LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFS 400
++ L +S+CS + G+ + +N G + ++D++ + D AF
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYVLRN-GFESWDNICNALIDMYMKCHRQDTAFR 393
Query: 401 LVQNMPMK 408
+ M K
Sbjct: 394 IFDRMSNK 401
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 178/507 (35%), Positives = 289/507 (57%), Gaps = 34/507 (6%)
Query: 43 IIINGFSQKNYIL-AKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEK 101
++ N +N I ++ Y G L +A + F++ S WN M +A+ E P++
Sbjct: 182 VLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKE 241
Query: 102 SVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMN 161
++ L+ QM+++ PD+ T+ +S C+ G + + + N F++T L++
Sbjct: 242 ALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLD 301
Query: 162 LYLMSGGECGVGCARLLFDDMPA-RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVS 220
++ G + AR +FD++ + R+ V+WN ++ Y + G + A ++FD MP R+VVS
Sbjct: 302 MHAKFGN---LEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVS 358
Query: 221 WTTMISGCAQNGKSRQALSLFNEMRRA-RVGLDQVALVAALSACAEIGDLKLGKWIHSYV 279
W +MI+G AQNG+S ++ LF EM + D+V + + LSAC IG LKL W+ V
Sbjct: 359 WNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIV 418
Query: 280 -EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
E+N +G +S N+LI MY+ CG + +A+ +F+ M R+ VS+ ++I+GFA G+
Sbjct: 419 REKNIKLG-----ISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGH 473
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
+EA+ +T++GVL+ACSH G ++EG+ F+ + P ++HY
Sbjct: 474 GKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQA-----PTVDHYA 528
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
CMVDL RAG +DEA L+Q+MPMKP+ V GSLL RIH L A KL E++P
Sbjct: 529 CMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLF-ELEP 587
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
+ Y+ L++N+YA+ RW+DV VR+ M K G++K G SWV+ G +H F GD ++
Sbjct: 588 QNLGNYV-LLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSH 646
Query: 504 KQASLIYKTLGEITMQAMQEGYKPDIS 530
+Q+ IYK L E+ + + G+ D S
Sbjct: 647 EQSKDIYKLLAELERKMKRVGFVADKS 673
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 200/461 (43%), Gaps = 87/461 (18%)
Query: 22 QIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAH-----KVFE 76
++ +L + + L Q H ++ N NY ++ LL + ++AH +F
Sbjct: 3 ELVALASKISNIRQLRQFHGHLVHNSLHSHNYWVSLLL----INCTRLHAHPAYVDSIFT 58
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
+ +P ++++ M++ ++R + V L+K P + Y +L+ + +
Sbjct: 59 SSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGK-----S 113
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSG--------------------GECGVGC-- 174
G H VL G+ + FIR ++++Y +G GC
Sbjct: 114 GNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWK 173
Query: 175 ------ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGC 228
A +LF+ MPAR++++W S++ GY K GD++ A + FDEMP R+VVSW M S
Sbjct: 174 SGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAY 233
Query: 229 AQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE------- 281
AQ ++AL+LF++M + D V +S+C+ IGD L I +++
Sbjct: 234 AQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNS 293
Query: 282 --------------NFSVGREPV--LVSLNNA-----LIHMYASCGEIEEAYGVFRKMQR 320
N + R L S NA +I Y G++ A +F M +
Sbjct: 294 FVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPK 353
Query: 321 RNTVSWTSMITGFAKQGYA----------------QEALLTFLGVLSACSHGGFVDEGRQ 364
R+ VSW SMI G+A+ G + Q +T VLSAC H G +
Sbjct: 354 RDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYW 413
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
+ + + IK I + ++ ++S+ G + +A + Q M
Sbjct: 414 VLDIVREK-NIKLGISGFNSLIFMYSKCGSVADAHRIFQTM 453
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 188/552 (34%), Positives = 288/552 (52%), Gaps = 90/552 (16%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTEN----PSTAI-------- 85
QIH+Q++ G Y+ L++ Y +G L +A KVF+ + + TA+
Sbjct: 85 QIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRG 144
Query: 86 -------------------WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLS 126
WN MI G+ + E+++ L+K+M+ PDE T ++S
Sbjct: 145 DFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVS 204
Query: 127 VCARCGLFREGEQVHGRVLAS----GYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDM 182
CA+ G G QVH V G+ S++ I L++LY
Sbjct: 205 ACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLY------------------- 245
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
K GD++ A+ +F+ + ++VVSW T+I G ++AL LF
Sbjct: 246 ---------------SKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQ 290
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFS-VGREPVLVSLNNALIHM 301
EM R+ + V L++ L ACA +G + +G+WIH Y+++ V E SL +LI M
Sbjct: 291 EMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNE---TSLRTSLIDM 347
Query: 302 YASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTF 346
YA CG+IE A+ VF M R+ SW +MI GFA G A A +TF
Sbjct: 348 YAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITF 407
Query: 347 LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP 406
+G+LSACSH G +D GRQ F+ M Q++ + P++EHYGCM+DL +GL EA ++ MP
Sbjct: 408 VGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMP 467
Query: 407 MKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDV 466
M+P+ + SLL C+ H N ELA AQKL+ +I+PE + Y+ L++N+YA A RW+DV
Sbjct: 468 MEPDGVIWCSLLKACKKHGNLELAESFAQKLI-KIEPENSGSYV-LLSNIYATAGRWEDV 525
Query: 467 AAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYK 526
A VR + G++K PG S ++++ V+H+F+ GD + + IY L E+ +Q + G+
Sbjct: 526 ARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAGFA 585
Query: 527 PDISELFLGIEE 538
PD SE+ +EE
Sbjct: 586 PDTSEVLQEMEE 597
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 215/389 (55%), Gaps = 21/389 (5%)
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGL 133
VFE + P+ IWN M+RGHA S P ++ +Y +M+ P+ Y++ FLL CA+
Sbjct: 20 VFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKA 79
Query: 134 FREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSL 193
F EG Q+H +VL G + ++ T+L+++Y +G G+ AR +FD R VVS +L
Sbjct: 80 FEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNG---GLEDARKVFDASSHRDVVSCTAL 136
Query: 194 LKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQ 253
+ GY RGD A K+FDE+ R+VVSW MI+G +NG+ +AL LF EM R V D+
Sbjct: 137 ITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDE 196
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
LV+ +SACA+ G ++LG+ +HS+V+++ + + NALI +Y+ CG++E A+G
Sbjct: 197 GTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFG 256
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEALL---------------TFLGVLSACSHGGF 358
+F + ++ VSW ++I G+ +EALL T L VL AC+H G
Sbjct: 257 LFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGA 316
Query: 359 VDEGRQFFECMNQNW-GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSL 417
+D GR +++ G+ ++D++++ G ++ A + +M + + ++
Sbjct: 317 IDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSS-WNAM 375
Query: 418 LLGCRIHNNAELASQVAQKLVA-EIDPEQ 445
+ G +H A A + ++ ++P+
Sbjct: 376 IFGFAMHGRANAAFDLFSRMRGNRVEPDD 404
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 136/290 (46%), Gaps = 32/290 (11%)
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH--- 215
L+ L ++S G+ A +F+ + +++ WN++L+G+ D A +++ M
Sbjct: 1 LLELCVVSPHFDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGH 60
Query: 216 -RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKW 274
N S+ ++ CA++ + + ++ + GLD+ + +S A G L+ +
Sbjct: 61 LPNSYSFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARK 120
Query: 275 IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
+ F +VS ALI YAS G+ A VF ++ R+ VSW +MITG+
Sbjct: 121 V-------FDASSHRDVVSC-TALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYV 172
Query: 335 KQGYAQEALL---------------TFLGVLSACSHGGFVDEGRQ---FFECMNQNWGIK 376
+ G +EAL T + V+SAC+ G ++ GRQ + + + + G
Sbjct: 173 ENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFS 232
Query: 377 PRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNN 426
++ ++DL+S+ G ++ AF L + + K D V + L+G H N
Sbjct: 233 SSLKIVNALIDLYSKCGDVETAFGLFEGLSCK--DVVSWNTLIGGYTHTN 280
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 177/497 (35%), Positives = 274/497 (55%), Gaps = 26/497 (5%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
++ + G ++ A K+F++ W+ +I ++E E+++ + M D
Sbjct: 316 MIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVD 375
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCAR 176
E LS CA + G+ +H L G S + ++ L+ +Y +CG + AR
Sbjct: 376 EVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMY----SKCGDIMVAR 431
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
LFD+ ++SWNS++ GY+K +D A IFD MP ++VVSW++MISG AQN +
Sbjct: 432 KLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDE 491
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
L+LF EM+ + D+ LV+ +SACA + L+ GKW+H+Y++ N + V L
Sbjct: 492 TLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLT----INVILGT 547
Query: 297 ALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------- 343
LI MY CG +E A VF M + +W ++I G A G + +L
Sbjct: 548 TLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTP 607
Query: 344 --LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
+TF+GVL AC H G VDEG+ F M + I+P ++HYGCMVDL RAG + EA L
Sbjct: 608 NEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEEL 667
Query: 402 VQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAK 461
+ MPM P+ A G+LL C+ H ++E+ +V +KL+ E+ P+ G+ L++N+YA+
Sbjct: 668 LNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLI-ELQPDH-DGFHVLLSNIYASKG 725
Query: 462 RWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAM 521
+W DV +R M K V K PG S ++ NGV+H+F+AGD T+ I L E+ M+
Sbjct: 726 KWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLK 785
Query: 522 QEGYKPDISELFLGIEE 538
EGY PDI+E+ L ++E
Sbjct: 786 LEGYTPDINEVLLDVDE 802
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 178/362 (49%), Gaps = 60/362 (16%)
Query: 91 RGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYC 150
R + ++ +P + LYK M+ D YTY L+ C+ E +QVH VL G+
Sbjct: 186 RAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFD 245
Query: 151 SNVFIRTNLMNLY--------------------------LMSGG-ECG-VGCARLLFDDM 182
S+V++R L+N + +++G E G V A+ ++ M
Sbjct: 246 SDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM 305
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
P RS+++ NS++ + RG + A K+FDEM +++V+W+ +I+ QN +A+ F
Sbjct: 306 PERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFV 365
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMY 302
M + V +D+V V+ALSACA + + +GK IHS + +G E ++L NALI+MY
Sbjct: 366 GMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSL---SLKIGTES-YINLQNALIYMY 421
Query: 303 ASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEG 362
+ CG+I A +F + + +SW SMI+G+ K C+ VD
Sbjct: 422 SKCGDIMVARKLFDEAYLLDLISWNSMISGYLK-----------------CN---LVDNA 461
Query: 363 RQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM---KPNDAVLGSLLL 419
+ F+ M + + + M+ +++ L DE +L Q M M KP++ L S++
Sbjct: 462 KAIFDSMPEK-----DVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVIS 516
Query: 420 GC 421
C
Sbjct: 517 AC 518
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 5/166 (3%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H+ I NG + + L+ Y+ G + A +VF + WN +I G A +
Sbjct: 530 VHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGL 589
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE-QVHGRVLASGYCSNVFIRT 157
E S+ ++ M P+E T+ +L C GL EG+ + + NV
Sbjct: 590 VESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYG 649
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMP-ARSVVSWNSLLKGYVKRGD 202
+++L +G + A L + MP V +W +LL K GD
Sbjct: 650 CMVDLLGRAG---KLQEAEELLNRMPMTPDVATWGALLGACKKHGD 692
>gi|359487598|ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Vitis vinifera]
Length = 603
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 188/539 (34%), Positives = 275/539 (51%), Gaps = 60/539 (11%)
Query: 19 TTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFE 76
R I SLLQ N+ + L +IH+ I+ING+ I KLL F S G L A VF
Sbjct: 22 NARAILSLLQGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLVFH 81
Query: 77 KTENPSTAIWNQMIRGHARSETPEK--SVYLYKQMID-KETEPDEYTYSFLLSVCARCGL 133
+ NP T WN MIRG ++S +P + ++ Y M+ PD YT+SFLL C
Sbjct: 82 RIHNPQTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAKE 141
Query: 134 FREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSL 193
+ +VHG ++ GY +V + TNL
Sbjct: 142 EGKCREVHGFIIRFGYDQDVVLCTNL---------------------------------- 167
Query: 194 LKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQ 253
++ Y G I+ A K+F+EMP R++VSW +MIS Q G +AL ++++MR + VG D
Sbjct: 168 IRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDG 227
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
LV+ LS+CA +G L +G +H + E V E + V NALI MYA CG + A
Sbjct: 228 FTLVSLLSSCAHVGALHMGVQMHRFAGERRLV--ENIFV--GNALIDMYAKCGSLASALS 283
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGF 358
+F M +R+ +W SMI G+ G EA+ +TFLG+L CSH G
Sbjct: 284 IFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLLCGCSHQGL 343
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLL 418
V EG Q+F M+ + +KP I+HYGCMVDLF RAG + EA ++++ P + + + +LL
Sbjct: 344 VKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLL 403
Query: 419 LGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
C+IH N E+ + LV AG L++ +YA AK Q VA +R+ + G+
Sbjct: 404 GSCKIHRNVEIGEMAMRNLVQL--GSLGAGDCVLLSGIYAEAKDLQGVARMRKLIQSRGI 461
Query: 479 RKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIE 537
+ PG SW+++ +H FV D ++ + IY+ L E+ +A GY + S L E
Sbjct: 462 KTTPGWSWIEVGDQVHRFVVDDKSHPDSREIYRKLEEVIHRASLVGYAMEESSLVAAPE 520
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 174/517 (33%), Positives = 293/517 (56%), Gaps = 25/517 (4%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++++ I +G + +++ L+ Y+ + A ++F++ + + N M + R
Sbjct: 257 KVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQG 316
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ ++ M+D PD + +S C++ G+ HG VL +G+ S I
Sbjct: 317 LTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICN 376
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y+ + A +FD M ++VV+WNS++ GYV+ G++D AW+ F+ MP +N
Sbjct: 377 ALIDMYMKCHRQ---DTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKN 433
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRAR-VGLDQVALVAALSACAEIGDLKLGKWIH 276
+VSW T+ISG Q +A+ +F M+ V D V +++ SAC +G L L KWI+
Sbjct: 434 IVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY 493
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
Y+E+N G + + V L L+ M++ CG+ E A +F + R+ +WT+ I A
Sbjct: 494 YYIEKN---GIQ-LDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMA 549
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G A+ A+ + F+G L+ACSHGG V +G++ F M + G+ P H
Sbjct: 550 GNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVH 609
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YGCMVDL RAGL++EA L+++MPM+PND + SLL CR+ N E+A+ A+K+ +
Sbjct: 610 YGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQV-L 668
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
PE+ Y+ L++NVYA+A RW D+A VR M + G+RKPPG S +QI G H+F +GD
Sbjct: 669 APERTGSYV-LLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDE 727
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++ + I L E++ +A G+ PD+S + + ++E
Sbjct: 728 SHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDE 764
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 194/428 (45%), Gaps = 59/428 (13%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
M++ P+ +++ T+ S L+ T L H + G + KL+A
Sbjct: 13 MVLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVA 72
Query: 61 FYVTSGY---LINAHKVFEKTENPSTA-IWNQMIRGHARSETPEKSVYLYKQMIDKETEP 116
G L A +VFE +E+ T ++N +IRG+A S +++ L+ +M++ P
Sbjct: 73 RSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISP 132
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCA 175
D+YT+ F LS CA+ G Q+HG ++ GY ++F++ +L++ Y ECG + A
Sbjct: 133 DKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFY----AECGELDSA 188
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
R +FD+M R+VVSW S++ GY +R A +F
Sbjct: 189 RKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLF------------------------- 223
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
F +R V + V +V +SACA++ DL+ G+ +++++ N + ++VS
Sbjct: 224 -----FRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI-RNSGIEVNDLMVS-- 275
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------ 343
AL+ MY C I+ A +F + N +M + + +QG +EAL
Sbjct: 276 -ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR 334
Query: 344 ---LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFS 400
++ L +S+CS + G+ + +N G + ++D++ + D AF
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYVLRN-GFESWDNICNALIDMYMKCHRQDTAFR 393
Query: 401 LVQNMPMK 408
+ M K
Sbjct: 394 IFDRMSNK 401
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 183/504 (36%), Positives = 285/504 (56%), Gaps = 29/504 (5%)
Query: 39 IHSQIIINGFSQKNYILAK-LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
IH + GF ++ ++ L+ FY L +A KVF++ W ++ G+AR+
Sbjct: 164 IHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAG 223
Query: 98 TPEKSVYLYKQMID-KETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
+++ L+ +M+ P+ T +S + GL G +H V G +V +
Sbjct: 224 LADEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLD 283
Query: 157 TNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
L++++ G+CG V AR +FD M + V SW S++ Y K GD++ A ++F +MP
Sbjct: 284 NALVDMF----GKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPR 339
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
RNVVSW+ MI+ +Q + +A+ LF EM A V LV+ LSACA++G L LG+WI
Sbjct: 340 RNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWI 399
Query: 276 HSYVEENFSVGREPVL-VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
+ EN+ V + L V+L NALI M+A CG++ EA +F +M RN VSW +MI A
Sbjct: 400 Y----ENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHA 455
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
G ++EA+ +TFLG+L++CSH G V EGR++F+ M + I+PR+
Sbjct: 456 VHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPRV 515
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
EHY CM+DL + GL++EAF + + MPM+ ++A G+LL CR+H N E+ + VA KLV
Sbjct: 516 EHYACMIDLLGKVGLLEEAFEVARGMPMEADEAGWGALLNACRMHGNVEIGACVADKLV- 574
Query: 440 EIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG 499
E+DP + Y+ L++ +YA+ +W V +R M GV+K PG S +++ G HDF+
Sbjct: 575 ELDPSDSGIYV-LMSQIYASKNKWDQVKMLRMTMRDRGVKKNPGCSSIEVEGKFHDFLVA 633
Query: 500 DSTYKQASLIYKTLGEITMQAMQE 523
D ++ + IY L I QE
Sbjct: 634 DVSHACSEEIYSALKNIYFHLKQE 657
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 216/500 (43%), Gaps = 96/500 (19%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS---GYLI 69
T+ + T + SLL+ + + L Q+H+ + + G + + ++LLAF S
Sbjct: 28 TNRNLVVTHPLLSLLESCASFRRLLQLHALLTVTGLAAHRFPASRLLAFCALSTPPRLAH 87
Query: 70 NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSV-- 127
A + + P+ + M+RG R+ P +++ L+++++ D T+ F +
Sbjct: 88 AAAILARASPGPNAYMLGTMMRGFLRARLPARALGLFRRVVRDRLPADARTFVFAVKAAA 147
Query: 128 ----CARCGLFREGEQVHGRVLASGYC-SNVFIRTNLMNLYLMSGGECGVGCARLLFDDM 182
G GE +H L G+ +V + L++ Y + A +FD+M
Sbjct: 148 AAAESEHGGTPSGGEAIHCAALKCGFVGESVLVGNALVHFY---ANHKSLDDAGKVFDEM 204
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
P R VVSW +L+ GY + G D AW++F M ++ G N
Sbjct: 205 PERDVVSWTTLVDGYARAGLADEAWRLFCRM---------VVVGGMRPNA---------- 245
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHM- 301
V LVAA+SA ++G L G +H YV E V R V+L+NAL+ M
Sbjct: 246 -----------VTLVAAVSAIGQMGLLAFGIMLHKYVTEG-GVARS---VNLDNALVDMF 290
Query: 302 ------------------------------YASCGEIEEAYGVFRKMQRRNTVSWTSMIT 331
YA CG++E A +F+ M RRN VSW+ MI
Sbjct: 291 GKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIA 350
Query: 332 GFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIK 376
+++ +EA+ T + VLSAC+ G +D GR +E + I
Sbjct: 351 AYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIG 410
Query: 377 PRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQK 436
+ ++D+F++ G + EA L M + N ++++ +H +E A ++ ++
Sbjct: 411 LTVNLGNALIDMFAKCGDVGEASKLFDEMAER-NVVSWNTMIMAHAVHGQSEEAIRLFEQ 469
Query: 437 LVAE-IDPEQAAGYLALVAN 455
L E I P+Q +L L+A+
Sbjct: 470 LKGENIVPDQIT-FLGLLAS 488
>gi|296089864|emb|CBI39683.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 188/539 (34%), Positives = 275/539 (51%), Gaps = 60/539 (11%)
Query: 19 TTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFE 76
R I SLLQ N+ + L +IH+ I+ING+ I KLL F S G L A VF
Sbjct: 4 NARAILSLLQGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLVFH 63
Query: 77 KTENPSTAIWNQMIRGHARSETPEK--SVYLYKQMID-KETEPDEYTYSFLLSVCARCGL 133
+ NP T WN MIRG ++S +P + ++ Y M+ PD YT+SFLL C
Sbjct: 64 RIHNPQTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAKE 123
Query: 134 FREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSL 193
+ +VHG ++ GY +V + TNL
Sbjct: 124 EGKCREVHGFIIRFGYDQDVVLCTNL---------------------------------- 149
Query: 194 LKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQ 253
++ Y G I+ A K+F+EMP R++VSW +MIS Q G +AL ++++MR + VG D
Sbjct: 150 IRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDG 209
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
LV+ LS+CA +G L +G +H + E V E + V NALI MYA CG + A
Sbjct: 210 FTLVSLLSSCAHVGALHMGVQMHRFAGERRLV--ENIFV--GNALIDMYAKCGSLASALS 265
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGF 358
+F M +R+ +W SMI G+ G EA+ +TFLG+L CSH G
Sbjct: 266 IFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLLCGCSHQGL 325
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLL 418
V EG Q+F M+ + +KP I+HYGCMVDLF RAG + EA ++++ P + + + +LL
Sbjct: 326 VKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLL 385
Query: 419 LGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
C+IH N E+ + LV AG L++ +YA AK Q VA +R+ + G+
Sbjct: 386 GSCKIHRNVEIGEMAMRNLVQL--GSLGAGDCVLLSGIYAEAKDLQGVARMRKLIQSRGI 443
Query: 479 RKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIE 537
+ PG SW+++ +H FV D ++ + IY+ L E+ +A GY + S L E
Sbjct: 444 KTTPGWSWIEVGDQVHRFVVDDKSHPDSREIYRKLEEVIHRASLVGYAMEESSLVAAPE 502
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 173/521 (33%), Positives = 293/521 (56%), Gaps = 32/521 (6%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTE--NPSTAIWNQMIRGHARS 96
+H I F ++L L+ FY + G+L A+ VFE E N WN M+ G +
Sbjct: 262 VHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQG 321
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
P+K++ L+++M ++ P+ T ++S CA+ G +V + + N+ +
Sbjct: 322 GYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVC 381
Query: 157 TNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
+++++ +CG V AR LFD+M R VVSW +++ GY K + A IFD MP
Sbjct: 382 NATIDMFV----KCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPR 437
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL--DQVALVAALSACAEIGDLKLGK 273
+++ +W +ISG Q+G+ ++AL++F E++ + G DQV L++ LSACA++G + +G+
Sbjct: 438 KDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGE 497
Query: 274 WIHSYVE-ENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
WIH Y++ E + R +L +LI MY+ G++E+A VF + ++ W++MI G
Sbjct: 498 WIHGYIKKERIQLNR-----NLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAG 552
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
A G + A+ +TF +L ACSH G VDEG++ F+ M + +G+ P
Sbjct: 553 LAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVP 612
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
+ +HY CMVD+ RAG ++EA ++ MP+ P+ +V G+LL C IH N ELA + +L
Sbjct: 613 KTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRL 672
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
+ EI+P Y+ L++N+YA W+ V+ +RQ+M G++K G S ++I+G +H+F+
Sbjct: 673 L-EIEPGNHGAYV-LLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFI 730
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
GD+ + + IY L EI + GY + + +EE
Sbjct: 731 VGDNAHPLSRDIYAKLDEIMARLRSHGYVANTLCMLQFVEE 771
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 123/481 (25%), Positives = 217/481 (45%), Gaps = 99/481 (20%)
Query: 9 ANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY- 67
++P +S T +L Q + K L QIH+Q++ Y ++L S +
Sbjct: 128 SSPTPASATATNVGDRALFQQCTSFKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFS 187
Query: 68 -LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMI-DKETEPDEYTYSFLL 125
L A KVF++ P+ WN +IR A S P +SV ++ +M+ D P+++T+ L+
Sbjct: 188 ALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLI 247
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPA 184
A F G+ VHG + + + +VF+ +L++ Y CG + A L+F+ +
Sbjct: 248 KAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFY----ASCGHLDLAYLVFEMIEG 303
Query: 185 --RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
+ +VSWNS++ G+V+ G D A +F+ M
Sbjct: 304 NNKDIVSWNSMVTGFVQGGYPDKALDLFERM----------------------------- 334
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN--NALIH 300
R V + V +V+ +SACA+ +L LG+ + Y++ N ++++LN NA I
Sbjct: 335 --RNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRN------EMMMNLNVCNATID 386
Query: 301 MYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK------------------------- 335
M+ CGE+E A G+F M++R+ VSWT++I G+AK
Sbjct: 387 MFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVL 446
Query: 336 -QGYAQ-----EAL-----------------LTFLGVLSACSHGGFVDEGRQFFECMNQN 372
GY Q EAL +T L LSAC+ G +D G + +
Sbjct: 447 ISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKE 506
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQ 432
I+ ++D++S++G +++A + ++ K + V +++ G +H E A +
Sbjct: 507 -RIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNK-DVFVWSAMIAGLAMHGRGEAAIE 564
Query: 433 V 433
+
Sbjct: 565 L 565
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 173/509 (33%), Positives = 284/509 (55%), Gaps = 59/509 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H I+ +GF Y+ + L+ Y G L NA + E E+ WN ++ G R
Sbjct: 286 QVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHG 345
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E+++ L+K M + + D+YT+ +L+ C + + VHG + I+T
Sbjct: 346 LEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSI--NPKSVHGLI----------IKT 393
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
N L+S N+L+ Y K GD+D A+ +F++M ++
Sbjct: 394 GFENYKLVS------------------------NALVDMYAKTGDMDCAYTVFEKMLEKD 429
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH- 276
V+SWT++++G AQN ++L +F +MR V DQ + + LSACAE+ L+ GK +H
Sbjct: 430 VISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHL 489
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+++ + S+ N+L+ MYA CG +++A +F MQ ++ ++WT++I G+A+
Sbjct: 490 DFIKSGLRWSQ-----SVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQN 544
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G + +L +TF+G+L ACSH G VDEGR++F+ MN+ +GIKP EH
Sbjct: 545 GKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEH 604
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
Y CM+DLF R+G +DEA L+ M +KP+ V SLL CR+H N ELA + A L E+
Sbjct: 605 YACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLF-EL 663
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+P A Y+ L +N+Y+A+++W DVA +R+ M G+ K PG SW++IN ++ F++ D
Sbjct: 664 EPMNAMPYVML-SNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDR 722
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDIS 530
+ + + IY + EI ++ + GY PD+S
Sbjct: 723 GHPREAEIYTKIDEIILRIKEAGYVPDMS 751
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 119/510 (23%), Positives = 225/510 (44%), Gaps = 89/510 (17%)
Query: 7 IPANPAT---------SSKALTTRQIFSLLQIRNTTKTLFQIH-SQIIINGFSQKN-YIL 55
P NP ++ A + I+ Q+ N Q++ ++ + + QK+ Y
Sbjct: 40 FPHNPCKFMAFLRSIHTTTAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSW 99
Query: 56 AKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETE 115
+++ YV G L+ A ++F+ S+ W+ +I G+ + ++ L++ M + +
Sbjct: 100 NTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWK 159
Query: 116 PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCA 175
++T +L VC+ GL + GE +HG V+ +G+ NVF+ T L+++Y + +C V A
Sbjct: 160 ASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMY--AKCKC-VSEA 216
Query: 176 RLLFD--DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGK 233
LF + ++ V W +++ GY AQNG
Sbjct: 217 EFLFKGLEFDRKNHVLWTAMVTGY-------------------------------AQNGD 245
Query: 234 SRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY-VEENFSVGREPVLV 292
+A+ F M V +Q L+AC+ + G+ +H + V+ F V
Sbjct: 246 GYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSN-----V 300
Query: 293 SLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------- 343
+ +AL+ MYA CG+++ A + M+ + VSW S++ GF + G +EAL
Sbjct: 301 YVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGR 360
Query: 344 ------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY----GCMVDLFSRAG 393
TF VL+ C G + IK E+Y +VD++++ G
Sbjct: 361 NMKIDDYTFPSVLNCCVVGSINPKSV-------HGLIIKTGFENYKLVSNALVDMYAKTG 413
Query: 394 LMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL-VAEIDPEQAAGYLAL 452
MD A+++ + M ++ + SL+ G +N+ E + ++ + V ++P+Q +
Sbjct: 414 DMDCAYTVFEKM-LEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQ-----FI 467
Query: 453 VANVYAAAKRWQDVAAVRQ---KMIKMGVR 479
VA++ +A + +Q IK G+R
Sbjct: 468 VASILSACAELTLLEFGKQVHLDFIKSGLR 497
>gi|5080805|gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 185/536 (34%), Positives = 301/536 (56%), Gaps = 66/536 (12%)
Query: 25 SLLQIRNTTKTLFQIHSQIIINGFSQKN---YILAKLLAFYVTSGYLINAHKVFEKTENP 81
++LQ + L Q+H+ + + ++ ++ K+L + + A +VF+ EN
Sbjct: 30 TVLQTCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENH 89
Query: 82 STAIWNQMIRGHARSET-PEKSVYLYKQMIDK-ETEPDEYTYSFLLSVCARCGLFREGEQ 139
S+ +WN +IR A + E++ LY++M+++ E+ PD++T+ F+L CA F EG+Q
Sbjct: 90 SSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQ 149
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYV 198
VH +++ G+ +V++ L++LY G CG + AR +FD+MP RS+VSWNS++ V
Sbjct: 150 VHCQIVKHGFGGDVYVNNGLIHLY----GSCGCLDLARKVFDEMPERSLVSWNSMIDALV 205
Query: 199 KRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVA 258
+ G+ D AL LF EM+R+ D + +
Sbjct: 206 RFGEYDS-------------------------------ALQLFREMQRS-FEPDGYTMQS 233
Query: 259 ALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM 318
LSACA +G L LG W H+++ V + V + N+LI MY CG + A VF+ M
Sbjct: 234 VLSACAGLGSLSLGTWAHAFLLRKCDVD-VAMDVLVKNSLIEMYCKCGSLRMAEQVFQGM 292
Query: 319 QRRNTVSWTSMITGFAKQGYAQEAL-----------------LTFLGVLSACSHGGFVDE 361
Q+R+ SW +MI GFA G A+EA+ +TF+G+L AC+H GFV++
Sbjct: 293 QKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNK 352
Query: 362 GRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG- 420
GRQ+F+ M +++ I+P +EHYGC+VDL +RAG + EA +V +MPMKP+ + SLL
Sbjct: 353 GRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDAC 412
Query: 421 CRIHNNAELASQVAQKLVAEIDPEQA-----AGYLALVANVYAAAKRWQDVAAVRQKMIK 475
C+ + EL+ ++A+ ++ + ++ +G L++ VYA+A RW DV VR+ M +
Sbjct: 413 CKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSE 472
Query: 476 MGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISE 531
G+RK PG S ++ING+ H+F AGD+++ Q IY+ L I + GY PD S+
Sbjct: 473 HGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQ 528
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 176/514 (34%), Positives = 283/514 (55%), Gaps = 29/514 (5%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H+Q G + +L YV G + +A +VF+ + WN MI G+++
Sbjct: 156 VHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGR 215
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
E++V ++++M + EPD +T LLSV + G F G VH ++ +G + +
Sbjct: 216 SEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNA 275
Query: 159 LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
LM++Y +CG + CA+ +FD M + VVSW ++ Y G ID A + F++MP +N
Sbjct: 276 LMDMY----AKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKN 331
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VVSW ++I Q G +A+ LF M + V + LVA LS+C+ +GDL LGK HS
Sbjct: 332 VVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHS 391
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y+ +N + +L NA+I MYA CG ++ A VF M +N VSW +I A G
Sbjct: 392 YIFDN----NITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHG 447
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
Y +EA+ +TF G+LSACSH G VD G+ +FE MN +GI P +EHY
Sbjct: 448 YGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHY 507
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
CMVDL R GL+ EA SL++ MP+KP+ V +LL CR + N + Q+ ++L+ E+
Sbjct: 508 ACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQLL-ELG 566
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
+ Y+ L++N+Y+ ++RW D+ + + + + G++K S+++I+G + F+ D
Sbjct: 567 RYNSGLYV-LLSNMYSESQRWDDMKNIWKILDQNGIKKCRAISFIEIDGCCYQFMVDDKR 625
Query: 503 YKQASLIYKTLGEITMQAMQEGYKP---DISELF 533
+ ++ IY LG++ GY D+ E++
Sbjct: 626 HGASTSIYSMLGQLMDHLKSAGYPCKHLDVEEIY 659
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/479 (25%), Positives = 222/479 (46%), Gaps = 91/479 (18%)
Query: 16 KALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVF 75
K+ T + + L+ + K L +H+QII++G + + L KL++ V L AHK+F
Sbjct: 32 KSPTHQTLHYLIDQCISLKQLKHVHAQIILHGLATQVLTLGKLVSSSVQLRDLRYAHKLF 91
Query: 76 EKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFR 135
++ P+ ++N +I+G++ S P KS+ LY++M+ P+++T F+L CA +
Sbjct: 92 DQIPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYW 151
Query: 136 EGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLL 194
G VH + G S+ ++ ++N+Y+ CG + AR +FDD+ R++VSWNS++
Sbjct: 152 LGVCVHAQSFKLGMGSHACVQNAILNIYV----ACGLITSARRVFDDISERTLVSWNSMI 207
Query: 195 KGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQV 254
GY K G+S +A+ +F EM+ + D
Sbjct: 208 NGYSKM-------------------------------GRSEEAVLMFREMQEVGLEPDVF 236
Query: 255 ALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGV 314
LV LS + G+ LG+++H ++ G E + + NAL+ MYA CG ++ A V
Sbjct: 237 TLVGLLSVSTKHGNFDLGRFVHLHM---VVTGIE-IDSIVTNALMDMYAKCGNLKCAKSV 292
Query: 315 FRKMQRRNTVSWTSMITGFAKQG--------------------------YAQEALL---- 344
F +M ++ VSWT MI +A G + QE L
Sbjct: 293 FDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAV 352
Query: 345 ----------------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDL 388
T + +LS+CSH G + G+Q + N I ++D+
Sbjct: 353 DLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDN-NITLSATLCNAIIDM 411
Query: 389 FSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGC-RIHNNAELASQVAQKLVAE-IDPEQ 445
+++ G + A + MP K +AV ++++G +H + A ++ +K+ A + P++
Sbjct: 412 YAKCGALQTAMDVFFGMPEK--NAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDE 468
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 5/168 (2%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q HS I N + + ++ Y G L A VF + WN +I A
Sbjct: 388 QAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHG 447
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRV-LASGYCSNVFIR 156
++++ ++++M PDE T++ LLS C+ GL G+ + L G +V
Sbjct: 448 YGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHY 507
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPAR-SVVSWNSLLKGYVKRGDI 203
+++L G +G A L MP + VV W++LL G++
Sbjct: 508 ACMVDLL---GRRGLLGEAISLIKKMPVKPDVVVWSALLGACRTYGNL 552
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 190/572 (33%), Positives = 298/572 (52%), Gaps = 66/572 (11%)
Query: 23 IFSLLQIRNT---TKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTE 79
+F L Q+ +T +TL +HS+II+ + + KL+ Y + + +A KVF++
Sbjct: 42 VFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIP 101
Query: 80 NPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
+ I N MIR + + + V ++ M PD YT+ +L C+ G G +
Sbjct: 102 ERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRK 161
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYV 198
+HG G S +F+ L+++Y G+CG + ARL+ D+M R VVSWNSL+ GY
Sbjct: 162 IHGSATKVGLSSTLFVGNGLVSMY----GKCGFLSEARLVLDEMSRRDVVSWNSLVVGYA 217
Query: 199 KRGDIDGAWKI-------------------------------------FDEMPHRNVVSW 221
+ D A ++ F +M +++VSW
Sbjct: 218 QNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSW 277
Query: 222 TTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE 281
MI +N +A+ L++ M D V++ + L AC + L LGK IH Y+E
Sbjct: 278 NVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIER 337
Query: 282 NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMIT--GFAKQGYA 339
+ P L+ L NALI MYA CG +E+A VF M+ R+ VSWT+MI+ GF+ +G
Sbjct: 338 KKLI---PNLL-LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCD 393
Query: 340 QEALLT-------------FLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMV 386
AL + F+ L+ACSH G ++EGR F+ M ++ I PR+EH CMV
Sbjct: 394 AVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMV 453
Query: 387 DLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQA 446
DL RAG + EA+ +Q+M M+PN+ V G+LL CR+H++ ++ A KL ++ PEQ
Sbjct: 454 DLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLF-QLAPEQ- 511
Query: 447 AGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQA 506
+GY L++N+YA A RW++V +R M G++K PG S V++N ++H F+ GD ++ Q+
Sbjct: 512 SGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQS 571
Query: 507 SLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
IY+ L + + + GY PD +EE
Sbjct: 572 DEIYRELDVLVKKMKELGYVPDSESALHDVEE 603
>gi|42567862|ref|NP_197034.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635759|sp|Q9LXF2.2|PP385_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g15300
gi|332004762|gb|AED92145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 184/520 (35%), Positives = 282/520 (54%), Gaps = 57/520 (10%)
Query: 19 TTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLL--AFYVTSGYLINAHKVFE 76
T R+ L Q +TL QIH+ +++NG ++ +L+ A G L AHK+F+
Sbjct: 11 TNRRRPKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFD 70
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
+ P +I N ++RG A+S PEK+V LY +M + PD YT++F+L C++
Sbjct: 71 EIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSN 130
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLK 195
G HG+V+ G+ N +++ N ++ CG +G A LFDD V+W+S+
Sbjct: 131 GFAFHGKVVRHGFVLNEYVK----NALILFHANCGDLGIASELFDDSAKAHKVAWSSMTS 186
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQN------------------------ 231
GY KRG ID A ++FDEMP+++ V+W MI+GC +
Sbjct: 187 GYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAM 246
Query: 232 -------GKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFS 284
G ++AL +F EMR A D V +++ LSACA +GDL+ GK +H Y+ E S
Sbjct: 247 ISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETAS 306
Query: 285 VGREP-VLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL 343
V V + NALI MYA CG I+ A VFR ++ R+ +W ++I G A +A+ ++
Sbjct: 307 VSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSI 365
Query: 344 ---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDL 388
+TF+GV+ ACSH G VDEGR++F M + I+P I+HYGCMVD+
Sbjct: 366 EMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDM 425
Query: 389 FSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAG 448
RAG ++EAF V++M ++PN V +LL C+I+ N EL +KL++ E +G
Sbjct: 426 LGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDE--SG 483
Query: 449 YLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
L++N+YA+ +W V VR+ V+KP G S ++
Sbjct: 484 DYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 190/572 (33%), Positives = 298/572 (52%), Gaps = 66/572 (11%)
Query: 23 IFSLLQIRNT---TKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTE 79
+F L Q+ +T +TL +HS+II+ + + KL+ Y + + +A KVF++
Sbjct: 42 VFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIP 101
Query: 80 NPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
+ I N MIR + + + V ++ M PD YT+ +L C+ G G +
Sbjct: 102 ERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRK 161
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYV 198
+HG G S +F+ L+++Y G+CG + ARL+ D+M R VVSWNSL+ GY
Sbjct: 162 IHGSATKVGLSSTLFVGNGLVSMY----GKCGFLSEARLVLDEMSRRDVVSWNSLVVGYA 217
Query: 199 KRGDIDGAWKI-------------------------------------FDEMPHRNVVSW 221
+ D A ++ F +M +++VSW
Sbjct: 218 QNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSW 277
Query: 222 TTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE 281
MI +N +A+ L++ M D V++ + L AC + L LGK IH Y+E
Sbjct: 278 NVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIER 337
Query: 282 NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMIT--GFAKQGYA 339
+ P L+ L NALI MYA CG +E+A VF M+ R+ VSWT+MI+ GF+ +G
Sbjct: 338 KKLI---PNLL-LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCD 393
Query: 340 QEALLT-------------FLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMV 386
AL + F+ L+ACSH G ++EGR F+ M ++ I PR+EH CMV
Sbjct: 394 AVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMV 453
Query: 387 DLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQA 446
DL RAG + EA+ +Q+M M+PN+ V G+LL CR+H++ ++ A KL ++ PEQ
Sbjct: 454 DLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLF-QLAPEQ- 511
Query: 447 AGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQA 506
+GY L++N+YA A RW++V +R M G++K PG S V++N ++H F+ GD ++ Q+
Sbjct: 512 SGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQS 571
Query: 507 SLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
IY+ L + + + GY PD +EE
Sbjct: 572 DEIYRELDVLVKKMKELGYVPDSESALHDVEE 603
>gi|357159954|ref|XP_003578611.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 600
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 193/590 (32%), Positives = 303/590 (51%), Gaps = 88/590 (14%)
Query: 8 PANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY 67
P A S + L + + SL L ++H+Q++ +G +KLL+ Y
Sbjct: 12 PRWAAPSQRRLVEQHLASLPHGLPRLHHLQELHAQLLKHGLHLDPVAASKLLSSYALHRR 71
Query: 68 LINAHKVFEKTENP--STAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
L + VF NP +T + N ++R +A + P ++V ++ M + D +TYSFL+
Sbjct: 72 LPASRGVFASFPNPHATTFLPNTLLRAYALNALPREAVAVFSAMPHR----DSFTYSFLI 127
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGG----------------- 168
+ G+ VH V+ G + ++ L++ Y +GG
Sbjct: 128 KALSSAGV-APLRAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFSDASKVFEEMPRRDVV 186
Query: 169 -----------ECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWK--------- 208
+ V AR +FD+M + VSWN+LL GY K GD++ A+K
Sbjct: 187 SWNSAMAAMVRQGEVEGARRMFDEMLEKDTVSWNTLLDGYTKAGDVEEAFKLFQCMPERN 246
Query: 209 ----------------------IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
IFD+MP +N+V+WT M+S CAQNG +A LF +M+
Sbjct: 247 VVSWSTVVSGYCKKGDMEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGKLFTQMKE 306
Query: 247 ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCG 306
A V LD A+V+ L+ACAE G L LGK IH YV +GR + NALI M+ CG
Sbjct: 307 ASVELDVAAVVSILAACAESGSLALGKRIHRYVRTR-QLGRS---THVCNALIDMFCKCG 362
Query: 307 EIEEAYGVF-RKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVL 350
I A VF ++ +++VSW ++I GFA G+ +AL +T + VL
Sbjct: 363 CINRADYVFDTEIVEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFCPDAVTMINVL 422
Query: 351 SACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPN 410
SAC+H GFV+EGR++F M +++G+ P+IEHYGCM+DL R GL+ EA L+++MP PN
Sbjct: 423 SACTHMGFVEEGRRYFANMERDYGVVPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWDPN 482
Query: 411 DAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVR 470
+ + GSLL CR+H N E A ++A ++++ P A Y A+++++YA A +W D+A R
Sbjct: 483 EVIWGSLLSACRLHKNVEYA-EIAVNELSKLQPSNAGNY-AVLSSIYAEAGKWSDMAKAR 540
Query: 471 QKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQA 520
+M G +K G SW++++ H+F GD + + I + + ++ A
Sbjct: 541 MQMKGTGSQKSSGSSWIELDEAFHEFTVGDRKHPDSDQISEMVDRLSSHA 590
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 174/515 (33%), Positives = 282/515 (54%), Gaps = 52/515 (10%)
Query: 40 HSQIIINGFSQKNYI-LAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
H++++ + + ++ + L+ YV+ G++ +A ++F++ WN MI G+ +S
Sbjct: 180 HARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGR 239
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
E+++ + +M + + P++ T +LS C G+ + V G+ N+ +
Sbjct: 240 FEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLV-- 297
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
N+L+ Y K G+I A K+FD M ++V
Sbjct: 298 --------------------------------NALVDMYSKCGEIGTARKLFDGMEDKDV 325
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
+ W TMI G +AL LF M R V + V +A L ACA +G L LGKW+H+Y
Sbjct: 326 ILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAY 385
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+++N VSL ++I MYA CG +E A VFR M R+ SW +MI+G A G+
Sbjct: 386 IDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGH 445
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
A+ AL +TF+GVLSAC+ GFV+ G ++F MN+++GI P+++HYG
Sbjct: 446 AERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYG 505
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
CM+DL +R+G DEA L+ NM M+P+ A+ GSLL CRIH E VA++L E++P
Sbjct: 506 CMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLF-ELEP 564
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
E + Y+ L++N+YA A RW DVA +R K+ G++K PG + ++I+GV+H+F+ GD +
Sbjct: 565 ENSGAYV-LLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFH 623
Query: 504 KQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
Q+ I++ L E+ + G+ PD SE+ ++E
Sbjct: 624 PQSENIFRMLDEVDRLLEETGFVPDTSEVLYDMDE 658
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 136/447 (30%), Positives = 232/447 (51%), Gaps = 30/447 (6%)
Query: 16 KALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY--LINAHK 73
K L +LL +L QIHS II +G + +KL+ F S L A
Sbjct: 21 KLLENHPHLNLLAKCPDIPSLKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALS 80
Query: 74 VFEKTEN--PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARC 131
+F + P+ IWN +IR H+ + TP S++L+ QM+ P+ +T+ L CA+
Sbjct: 81 LFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKS 140
Query: 132 GLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWN 191
E +Q+H L + + T+L+++Y G + ARL+FD R VS+
Sbjct: 141 KATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVG---ELRHARLVFDKSTLRDAVSFT 197
Query: 192 SLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL 251
+L+ GYV G +D A ++FDE+P ++VVSW MI+G Q+G+ +AL+ F M+ A V
Sbjct: 198 ALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSP 257
Query: 252 DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEA 311
+Q +V+ LSAC + L+LGKWI S+V + G+ LV NAL+ MY+ CGEI A
Sbjct: 258 NQSTMVSVLSACGHLRSLELGKWIGSWVRDR-GFGKNLQLV---NALVDMYSKCGEIGTA 313
Query: 312 YGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHG 356
+F M+ ++ + W +MI G+ +EAL +TFL VL AC+
Sbjct: 314 RKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASL 373
Query: 357 GFVDEGRQFFECMNQNW---GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAV 413
G +D G+ +++N G + + ++ ++++ G ++ A + ++M + + A
Sbjct: 374 GALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSR-SLAS 432
Query: 414 LGSLLLGCRIHNNAELASQVAQKLVAE 440
+++ G ++ +AE A + ++++ E
Sbjct: 433 WNAMISGLAMNGHAERALGLFEEMINE 459
>gi|296082950|emb|CBI22251.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 182/477 (38%), Positives = 284/477 (59%), Gaps = 30/477 (6%)
Query: 32 TTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKTENPSTAIWNQM 89
T + L IH+ +LAK+ F S G L A ++F + P+T +N +
Sbjct: 7 TMQALKLIHALAFRANLHHHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTL 66
Query: 90 IRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR----CGLFREGEQVHGRVL 145
IRG+++S +P +SV L+ QM +PD +T++FLL +R L +++HG VL
Sbjct: 67 IRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDEIHGAVL 126
Query: 146 ASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDG 205
G+C ++F+ L++LY G A +F++M VVSW+ L+ +V+ G+++
Sbjct: 127 KLGFCFHLFVMNALIHLYAARGVPAA---AHQVFNEMVGADVVSWSGLVVAHVRAGELEL 183
Query: 206 AWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAE 265
A ++F EMP R+VVSWT M+SG AQ +SR+AL LF EMR V D+VA+V+ +SAC
Sbjct: 184 ARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVSVISACTS 243
Query: 266 IGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVS 325
+GDL+ G +H Y++EN G +VSL NALI MYA CG ++ A+ VF M+R++ ++
Sbjct: 244 LGDLETGFEVHRYIDEN-GFGW---MVSLCNALIDMYAKCGCMDLAWQVFNNMERKSLIT 299
Query: 326 WTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMN 370
W SMI+ A G A++A +TFL +L+A +H G+VD+G FE M
Sbjct: 300 WNSMISACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALLTAYTHKGWVDDGYGLFESMQ 359
Query: 371 QNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELA 430
+++G++ +EHYGCMVD+ RAG ++EA+ L+ +M M ND V G+LL CRI+ + E+
Sbjct: 360 RDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRIYGDVEMG 419
Query: 431 SQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWV 487
+V +KL+ E+ P++ GY L+ ++Y AA R + +R+ M G +K G SWV
Sbjct: 420 ERVLKKLI-ELKPDE-GGYYILLRDIYVAAGRRAEAIELRRAMDVNGAKKTLGCSWV 474
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 178/510 (34%), Positives = 275/510 (53%), Gaps = 57/510 (11%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
H +I G + ++ L+ Y G + +A KVF++ WN MI G+++
Sbjct: 150 HCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHA 209
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
++V L+++M++ +P+E + +L C G + G V V+ + N F+ + L
Sbjct: 210 GEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSAL 269
Query: 160 MNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVV 219
+++Y G+CG D+ A +IFD M ++ V
Sbjct: 270 IHMY----GKCG------------------------------DLVSARRIFDSMKKKDKV 295
Query: 220 SWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV 279
+W MI+G AQNG S +A+ LF +MR + DQ+ L+ LSACA IG L LGK + Y
Sbjct: 296 TWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYA 355
Query: 280 EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYA 339
E G + V + AL+ MYA CG ++ A+ VF M ++N VSW +MI+ A G A
Sbjct: 356 SER---GFQDD-VYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQA 411
Query: 340 QEAL-----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
QEAL +TF+GVLSAC H G VDEGR+ F M+ ++G+ P+IEHY
Sbjct: 412 QEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHY 471
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
CMVDLFSRAG ++EA+ V MP KP++ +LG+LL C+ N +++ +V KL+ E++
Sbjct: 472 SCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERV-MKLLLELE 530
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P + Y+ + + +YA +RW D A +R M + GV K PG SW+ IN LH+F AGD
Sbjct: 531 PSNSGNYV-ISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVL 589
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISEL 532
+++ I++ L + +EGY P+ + L
Sbjct: 590 HQEWIEIHQILDLLIDDLRREGYIPNANLL 619
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 224/474 (47%), Gaps = 72/474 (15%)
Query: 9 ANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKN---YILAKLLAFYVTS 65
+ P + +AL+ + SLLQ + K L QIH+Q++ N + N Y +A L F S
Sbjct: 22 SKPNPNRQALSDK-FNSLLQQCLSIKQLKQIHAQLLTNSIHKPNSFLYKIADLKDFAYAS 80
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARS-ETPEKSVYLYKQMIDKETEPDEYTYSFL 124
+ F +P+ +N MIRG + + ++ Y +M +P+ TY FL
Sbjct: 81 VF-------FSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFL 133
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMP 183
C+ G H V+ G + + +L+ +Y CG +G AR +FD++
Sbjct: 134 FIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMY----ARCGKMGDARKVFDEIS 189
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
+ +VSWNS++ GY K M H + +A+ LF E
Sbjct: 190 QKDLVSWNSMISGYSK-------------MRH------------------AGEAVGLFRE 218
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
M A ++++LV+ L AC E+GDLKLG W+ +V EN + + + +ALIHMY
Sbjct: 219 MMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVEN----KMTLNYFMGSALIHMYG 274
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLG 348
CG++ A +F M++++ V+W +MITG+A+ G ++EA+ +T +G
Sbjct: 275 KCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIG 334
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
+LSAC+ G +D G+Q E G + + +VD++++ G +D AF + MP K
Sbjct: 335 ILSACASIGALDLGKQ-VEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMP-K 392
Query: 409 PNDAVLGSLLLGCRIHNNAELASQVAQKLVAE---IDPEQAAGYLALVANVYAA 459
N+ +++ H A+ A + + ++ E + P L A V+A
Sbjct: 393 KNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAG 446
>gi|242085334|ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
gi|241943785|gb|EES16930.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
Length = 655
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 178/527 (33%), Positives = 296/527 (56%), Gaps = 29/527 (5%)
Query: 23 IFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAK-LLAFYVTSGYLINAHKVFEKTENP 81
+F++ ++ IH GF ++ ++ L+ Y +S L +A K+F++ +
Sbjct: 136 VFAVKAATTSSSPAEAIHCVAFKRGFIGQSVLVGNALVHMYASSMSLPDARKLFDEMADR 195
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKETE-PDEYTYSFLLSVCARCGLFREGEQV 140
W ++ G+AR P+++ ++ +M+ P+E T S + GL G V
Sbjct: 196 DVVSWTTLVDGYARGGLPDEAWRVFCRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRMV 255
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVK 199
H V+ SG +V + L++++ G+CG V A+ +FD MP + V SW S++ Y K
Sbjct: 256 HQCVVESGVRMSVNLENALVDMF----GKCGCVASAKEIFDGMPIKDVYSWTSMVSAYAK 311
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
GD++ A K+F E+P+RN VSW+ M++ +Q +A+ +FN+M A V LV+
Sbjct: 312 CGDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFNDMIAAGVEPIDATLVSV 371
Query: 260 LSACAEIGDLKLGKWIH-SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM 318
LSACA++G L +G+ ++ +Y+ + + + V+L+NA I M+A CG++ A +FR M
Sbjct: 372 LSACAQLGCLDVGRCLYDAYIVSH----KVELTVNLSNAFIDMFAKCGDVGAASRLFRNM 427
Query: 319 QRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGR 363
+ +N VSW +MI A G ++EAL +T++GVLSACSH G V EGR
Sbjct: 428 EDKNVVSWNTMIVAHALHGQSEEALHLFQKFKAIGIFPDEITYIGVLSACSHSGLVSEGR 487
Query: 364 QFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRI 423
F+ M +GI+PR EHY CM+DL + GL++EAF + ++MP+ ++A G+LL CR+
Sbjct: 488 YHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLEEAFEVARSMPVGADEAGWGALLNACRM 547
Query: 424 HNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPG 483
H N E+ A KLV +DP + Y+ L++ +YA+ +W V +R M GV+K PG
Sbjct: 548 HGNVEIGKCAADKLVG-LDPSDSGIYV-LMSQIYASKSKWGQVKMIRTVMRDRGVKKNPG 605
Query: 484 QSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
S ++++G H+F+A D ++ + IY L I + + EGY +S
Sbjct: 606 CSSIEVDGKFHEFLAADVSHAHSEDIYAALENIYLHSKLEGYISHVS 652
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/473 (24%), Positives = 208/473 (43%), Gaps = 82/473 (17%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSG--YLIN 70
T+ + T + SLL+ + + L Q+ + + ++G + + ++LLAF S L +
Sbjct: 24 TNRNLVVTHPLLSLLESCASFRRLLQLQALLTVSGLAAHRFPASRLLAFCALSDPPRLAH 83
Query: 71 AHKVFEK-TENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
A V + E P+ + M+RG R+ P ++ L+++++ D T F +V A
Sbjct: 84 AAAVLAQCAEGPNAYMLATMMRGFLRAGKPAHALALFRRVLRDRLPADARTIVF--AVKA 141
Query: 130 RCGLFREGEQVHGRVLASGYCS-NVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVV 188
E +H G+ +V + L+++Y S + AR LFD+M R VV
Sbjct: 142 ATTSSSPAEAIHCVAFKRGFIGQSVLVGNALVHMYASS---MSLPDARKLFDEMADRDVV 198
Query: 189 SWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR 248
SW +L+ GY + G D AW++F M +++G
Sbjct: 199 SWTTLVDGYARGGLPDEAWRVFCRM----------VVAGGGWP----------------- 231
Query: 249 VGLDQVALVAALSACAEIGDLKLGKWIHSYVEEN---FSVGREPVLVSLN---------- 295
++V LVAA SA +IG L LG+ +H V E+ SV E LV +
Sbjct: 232 ---NEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNLENALVDMFGKCGCVASAK 288
Query: 296 --------------NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQE 341
+++ YA CG++E A +F+++ RN VSW+ M+ +++ +E
Sbjct: 289 EIFDGMPIKDVYSWTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEE 348
Query: 342 AL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMV 386
A+ T + VLSAC+ G +D GR ++ + ++ + +
Sbjct: 349 AMRIFNDMIAAGVEPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFI 408
Query: 387 DLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
D+F++ G + A L +NM K N ++++ +H +E A + QK A
Sbjct: 409 DMFAKCGDVGAASRLFRNMEDK-NVVSWNTMIVAHALHGQSEEALHLFQKFKA 460
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 121/280 (43%), Gaps = 32/280 (11%)
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
N TM+ G + GK AL+LF + R R+ D +V A+ A + IH
Sbjct: 96 NAYMLATMMRGFLRAGKPAHALALFRRVLRDRLPADARTIVFAVKAATT--SSSPAEAIH 153
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+ +G+ V + NAL+HMYAS + +A +F +M R+ VSWT+++ G+A+
Sbjct: 154 CVAFKRGFIGQS---VLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYARG 210
Query: 337 GYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
G EA +T + SA G + GR +C+ ++ G++ +
Sbjct: 211 GLPDEAWRVFCRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQCVVES-GVRMSVN 269
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKP--NDAVLGSLLLGCRIHNNAELASQVAQKLV 438
+VD+F + G + A + MP+K + + S C N A KL
Sbjct: 270 LENALVDMFGKCGCVASAKEIFDGMPIKDVYSWTSMVSAYAKCGDLEN-------AGKLF 322
Query: 439 AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
EI A + +VA Y+ A ++ + MI GV
Sbjct: 323 KEIPNRNAVSWSCMVA-AYSQANLPEEAMRIFNDMIAAGV 361
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 182/546 (33%), Positives = 290/546 (53%), Gaps = 61/546 (11%)
Query: 6 IIPANPATSSKALTT---RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFY 62
+I +P+ S T + S L + K L QI + I IL KL+
Sbjct: 9 VIQQSPSQHSSYYNTTYPSSLLSCLPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSC 68
Query: 63 V---TSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEY 119
T+ + AH++FE P ++N M RG++RS P K++ L+ + ++ PD+Y
Sbjct: 69 TQNPTTASMDYAHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDY 128
Query: 120 TYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLF 179
T+ LL C F++G+Q+H + G N ++ L+N+Y GC
Sbjct: 129 TFPSLLKACVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMY--------AGC----- 175
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
D+DGA ++FDE+ VVS+ +I+G A++ + +ALS
Sbjct: 176 ---------------------NDVDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALS 214
Query: 240 LFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
LF +++ ++ + V +++ LS+CA +G L LGKWIH YV++N G + V +N ALI
Sbjct: 215 LFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKN---GLDKY-VKVNTALI 270
Query: 300 HMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------L 344
MYA CG ++ A VF M R+T +W++MI +A G Q+ + +
Sbjct: 271 DMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEI 330
Query: 345 TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQN 404
TFLG+L ACSH G VDEG ++F M++ +GI P I+HYGCMVDL RAGL+ EA+ +
Sbjct: 331 TFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDE 390
Query: 405 MPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQ 464
+P+KP + +LL C H N ELA QV +++ E+D Y+ L +N+ A A +W+
Sbjct: 391 LPIKPTPILWRTLLSSCSSHGNLELAKQVMNQIL-ELDDSHGGDYVIL-SNLCARAGKWE 448
Query: 465 DVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEG 524
DV +R+ MI G K PG S ++++ V+H+F +GD + ++ +++ L E+ + G
Sbjct: 449 DVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRALDELVKELKSVG 508
Query: 525 YKPDIS 530
Y PD S
Sbjct: 509 YVPDTS 514
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 188/601 (31%), Positives = 300/601 (49%), Gaps = 98/601 (16%)
Query: 26 LLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLL--AFYVTSGYLINAHKVFEKTENPST 83
+LQ T K L Q+H+ ++ I +L A + + A +F + P +
Sbjct: 27 ILQQCKTPKDLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPES 86
Query: 84 AIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGR 143
+ +N MIRG A +P+ ++ L+K+M +K + D++T+S +L C+R REGEQVH
Sbjct: 87 SAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHAL 146
Query: 144 VLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGD 202
+L SG+ SN F+ L+ +Y CG +G AR +FD MP RS+V+WNS+L GY K G
Sbjct: 147 ILKSGFKSNEFVENTLIQMY----ANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGL 202
Query: 203 IDGAWKIFDEMPH---------------------------------------RNVVSWTT 223
D K+F ++ RN T+
Sbjct: 203 WDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTS 262
Query: 224 MISGCAQNGKSRQALSLFN-------------------------------EMRRARVGLD 252
+I A+ G+ A LF+ EM++ V +
Sbjct: 263 LIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPN 322
Query: 253 QVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAY 312
+V +V+ L +CA +G + GKW+H Y+++ + + V+L LI YA CG I+ +
Sbjct: 323 EVTMVSVLYSCAMLGAYETGKWVHFYIKKK----KMKLTVTLGTQLIDFYAKCGYIDRSV 378
Query: 313 GVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGG 357
VF++M +N +WT++I G A G + AL +TF+GVLSACSH
Sbjct: 379 EVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHAC 438
Query: 358 FVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSL 417
VD+GR F M +++ I+PRIEHYGCMVD+ RAG ++EA+ + NMP PN V +L
Sbjct: 439 LVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTL 498
Query: 418 LLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMG 477
L CR H N E+A + + + ++P + Y+ L++N YA R +D VR + +
Sbjct: 499 LASCRAHKNIEMAEKSLEH-ITRLEPAHSGDYI-LLSNTYALVGRVEDAIRVRSLIKEKE 556
Query: 478 VRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIE 537
++K PG S ++++GV+H+F + D +K + I+ L ++ Q + GY P+ + L E
Sbjct: 557 IKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDDARLEAE 616
Query: 538 E 538
E
Sbjct: 617 E 617
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 177/552 (32%), Positives = 303/552 (54%), Gaps = 30/552 (5%)
Query: 2 LVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAF 61
+VE + NP T A++ L++ K + + +++ G ++ LL
Sbjct: 214 MVEVGVEPNPVTMVCAISACAKLKDLEL---GKKVCNLMTEL---GVKSNTLVVNALLDM 267
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
Y+ G + ++F++ + + ++N ++ + + + + + +M+ K PD+ T
Sbjct: 268 YMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTM 327
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDD 181
++ CA+ G G+ H V +G I ++++Y M G+ C +FD
Sbjct: 328 LSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMY-MKCGKREAACK--VFDS 384
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
M ++VV+WNSL+ G V+ G+++ A +IF EMP N+VSW TMI Q +A+ L
Sbjct: 385 MSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLL 444
Query: 242 NEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHM 301
EM+ + D+V +V SAC +G L L KWI++Y+E+N + + L AL+ M
Sbjct: 445 REMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKN----DIHIDMQLGTALVDM 500
Query: 302 YASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTF 346
++ CG+ A VF M++R+ +WT+ I A +G A+ A+ F
Sbjct: 501 FSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVF 560
Query: 347 LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP 406
+ +L+A SHGG+VD+GRQ F M + G+ P+I HYGCMVDL RAGL++EAF L+++MP
Sbjct: 561 VALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMP 620
Query: 407 MKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDV 466
+KPND + GS L CR H N E A+ +K + ++ PE+ G L++N+YA+A +W DV
Sbjct: 621 IKPNDVIWGSFLAACRKHKNVEFANYADEK-ITQLAPEK-VGIHVLLSNIYASAGKWNDV 678
Query: 467 AAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYK 526
A VR +M + G +K G S ++++G++ +F +GD ++ + + I L EI + Q GY
Sbjct: 679 ARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQEINCRISQVGYV 738
Query: 527 PDISELFLGIEE 538
PD + + + ++E
Sbjct: 739 PDTTNVLVDVDE 750
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 195/416 (46%), Gaps = 63/416 (15%)
Query: 11 PATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKL--LAFYVTSGYL 68
P T+ K S LQ T L Q+H ++ G N ++A + + + Y
Sbjct: 18 PTTTQKPKN-----SSLQTCKTLIELKQLHCNMLKKGVFNINKLIAACVQMGTHESLNYA 72
Query: 69 INAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMID-KETEPDEYTYSFLLSV 127
+NA K E T+ S N +IRG+A S ++++++Y MI PD +T+ FLLS
Sbjct: 73 LNAFKEDEGTK-CSLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSA 131
Query: 128 CARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSV 187
C++ F EG QVHG V+ G ++F+
Sbjct: 132 CSKIMAFSEGVQVHGVVVKMGLVKDLFVA------------------------------- 160
Query: 188 VSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRA 247
NSL+ Y G +D K+FDEM RNVVSWT++I+G + +++A+ LF EM
Sbjct: 161 ---NSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEV 217
Query: 248 RVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGE 307
V + V +V A+SACA++ DL+LGK + + + E V ++V NAL+ MY CG+
Sbjct: 218 GVEPNPVTMVCAISACAKLKDLELGKKVCNLMTE-LGVKSNTLVV---NALLDMYMKCGD 273
Query: 308 IEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSA 352
+ +F + +N V + ++++ + + G A E L +T L ++A
Sbjct: 274 MYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAA 333
Query: 353 CSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
C+ G + G+ + +N G++ ++D++ + G + A + +M K
Sbjct: 334 CAQLGDLSVGKSSHAYVFRN-GLERLDNISNAIIDMYMKCGKREAACKVFDSMSNK 388
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 180/414 (43%), Gaps = 85/414 (20%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H ++ G + ++ L+ FY G + KVF++ + W +I G++
Sbjct: 143 QVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVN 202
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++V L+ +M++ EP+ T +S CA+ G++V + G SN +
Sbjct: 203 MAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVN 262
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y+ G V R +FD+ +++V +N+++ YV
Sbjct: 263 ALLDMYMKCGDMYAV---REIFDEFSDKNLVMYNTIMSNYV------------------- 300
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
Q+G + + L + +EM + D+V +++ ++ACA++GDL +GK H+
Sbjct: 301 ------------QHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHA 348
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
YV F G E L +++NA+I MY CG+ E A VF M + V+W S+I G + G
Sbjct: 349 YV---FRNGLER-LDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDG 404
Query: 338 YAQEAL----------------------------------------------LTFLGVLS 351
+ AL +T +G+ S
Sbjct: 405 ELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIAS 464
Query: 352 ACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
AC + G +D + + + +N I ++ +VD+FSR G A + +NM
Sbjct: 465 ACGYLGALDLAKWIYTYIEKN-DIHIDMQLGTALVDMFSRCGDPLNAMRVFENM 517
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 177/533 (33%), Positives = 299/533 (56%), Gaps = 33/533 (6%)
Query: 26 LLQIRNTTKTLFQIHSQIIINGF---SQKNYILAKLLAFYVTSGYLINAHKVFEKTENPS 82
L+ + + QIH+ I+ + + + KL Y + G + ++ +F +T +P
Sbjct: 35 LIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPD 94
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHG 142
++ I + + +++ LY Q++ E P+E+T+S LL C+ + G+ +H
Sbjct: 95 LFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLIHT 150
Query: 143 RVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGD 202
VL G + ++ T L+++Y GG+ V A+ +FD MP RS+VS +++ Y K+G+
Sbjct: 151 HVLKFGLGIDPYVATGLVDVY-AKGGD--VVSAQKVFDRMPERSLVSSTAMITCYAKQGN 207
Query: 203 IDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM-RRARVGLDQVALVAALS 261
++ A +FD M R++VSW MI G AQ+G AL LF ++ + D++ +VAALS
Sbjct: 208 VEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALS 267
Query: 262 ACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR 321
AC++IG L+ G+WIH +V+ + R + V + LI MY+ CG +EEA VF R+
Sbjct: 268 ACSQIGALETGRWIHVFVKSS----RIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRK 323
Query: 322 NTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQF 365
+ V+W +MI G+A GY+Q+AL +TF+G L AC+H G V+EG +
Sbjct: 324 DIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRI 383
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHN 425
FE M Q +GIKP+IEHYGC+V L RAG + A+ ++NM M + + S+L C++H
Sbjct: 384 FESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHG 443
Query: 426 NAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQS 485
+ L ++A+ L+ + +G L++N+YA+ ++ VA VR M + G+ K PG S
Sbjct: 444 DFVLGKEIAEYLIGL--NIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGIS 501
Query: 486 WVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++I +H+F AGD + ++ IY L +I+ + GY P+ + + +EE
Sbjct: 502 TIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEE 554
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 157/372 (42%), Gaps = 80/372 (21%)
Query: 24 FSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVF----EKTE 79
FS L +TK+ IH+ ++ G Y+ L+ Y G +++A KVF E++
Sbjct: 133 FSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSL 192
Query: 80 NPSTAI---------------------------WNQMIRGHARSETPEKSVYLYKQMI-D 111
STA+ WN MI G+A+ P ++ L+++++ +
Sbjct: 193 VSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAE 252
Query: 112 KETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG 171
+ +PDE T LS C++ G G +H V +S NV + T L+++Y +CG
Sbjct: 253 GKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMY----SKCG 308
Query: 172 -VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP-----HRNVVSWTTMI 225
+ A L+F+D P + +V+WN+++ GY G A ++F+EM +++ +
Sbjct: 309 SLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTL 368
Query: 226 SGCAQNGKSRQALSLFNEM--------------------------RRA-------RVGLD 252
CA G + + +F M +RA + D
Sbjct: 369 QACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDAD 428
Query: 253 QVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAY 312
V + L +C GD LGK I Y+ ++ + V L+N +YAS G+ E
Sbjct: 429 SVLWSSVLGSCKLHGDFVLGKEIAEYL-IGLNIKNSGIYVLLSN----IYASVGDYEGVA 483
Query: 313 GVFRKMQRRNTV 324
V M+ + V
Sbjct: 484 KVRNLMKEKGIV 495
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 183/555 (32%), Positives = 292/555 (52%), Gaps = 30/555 (5%)
Query: 3 VEEIIPANPATSSK----ALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKL 58
V+ ++P++ A++ LT ++ LL T + ++H+ + G + +L
Sbjct: 14 VQPVLPSSSASTGGQQHGVLTADRVAGLLTGCATLRRTGELHAAAVRAGVDGDRAVGFRL 73
Query: 59 LAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDE 118
Y S L + T +P+T + I H+ ++ L +M+ + P
Sbjct: 74 QRAYAASDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTS 133
Query: 119 YTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLL 178
+T S L C L G +H + ++ T L+ +Y G AR L
Sbjct: 134 HTLSSSLPACHGLAL---GRALHAYAFKLALAGDSYVATALLGMYARGGD---ADAARAL 187
Query: 179 FDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQAL 238
FD+MP VV ++L Y K G +D A ++FD MP ++ + W MI G Q+G+ +AL
Sbjct: 188 FDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEAL 247
Query: 239 SLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNAL 298
LF M R+ V D+VA++ ALSA A++G + G+W+HSYV+ + R + + AL
Sbjct: 248 RLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSR---RVQLNARVGTAL 304
Query: 299 IHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------------- 343
I MY CG +E+A VF + ++ V W +MI G+A G +++AL
Sbjct: 305 IDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTD 364
Query: 344 LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQ 403
+TF+G+L+ACSH G VDEG QFF+ M + + I P+IEHYGCMVDL RAGL++EAF LVQ
Sbjct: 365 ITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQ 424
Query: 404 NMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRW 463
+M + P+ + SLL CR+H N L Q+A LVA +G L++N+YAA W
Sbjct: 425 SMTIAPDTVMWVSLLAACRLHKNMALGQQIADYLVA--GGLANSGMYILLSNIYAAVGNW 482
Query: 464 QDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQE 523
++VA VR M G++K PG S +++ +++FVAGD ++ + IY L ++ ++
Sbjct: 483 EEVARVRSMMKASGIQKEPGCSAIEVGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQ 542
Query: 524 GYKPDISELFLGIEE 538
G+ P + ++E
Sbjct: 543 GHVPQTELVLHDLDE 557
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 183/555 (32%), Positives = 292/555 (52%), Gaps = 30/555 (5%)
Query: 3 VEEIIPANPATSSK----ALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKL 58
V+ ++P++ A++ LT ++ LL T + ++H+ + G + +L
Sbjct: 13 VQPVLPSSSASTGGQQHGVLTADRVAGLLTGCATLRRTGELHAAAVRAGVDGDRAVGFRL 72
Query: 59 LAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDE 118
Y S L + T +P+T + I H+ ++ L +M+ + P
Sbjct: 73 QRAYAASDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTS 132
Query: 119 YTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLL 178
+T S L C L G +H + ++ T L+ +Y G AR L
Sbjct: 133 HTLSSSLPACHGLAL---GRALHAYAFKLALAGDSYVATALLGMYARGGD---ADAARAL 186
Query: 179 FDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQAL 238
FD+MP VV ++L Y K G +D A ++FD MP ++ + W MI G Q+G+ +AL
Sbjct: 187 FDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEAL 246
Query: 239 SLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNAL 298
LF M R+ V D+VA++ ALSA A++G + G+W+HSYV+ + R + + AL
Sbjct: 247 RLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSR---RVQLNARVGTAL 303
Query: 299 IHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------------- 343
I MY CG +E+A VF + ++ V W +MI G+A G +++AL
Sbjct: 304 IDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTD 363
Query: 344 LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQ 403
+TF+G+L+ACSH G VDEG QFF+ M + + I P+IEHYGCMVDL RAGL++EAF LVQ
Sbjct: 364 ITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQ 423
Query: 404 NMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRW 463
+M + P+ + SLL CR+H N L Q+A LVA +G L++N+YAA W
Sbjct: 424 SMTIAPDTVMWVSLLAACRLHKNMALGQQIADYLVA--GGLANSGMYILLSNIYAAVGNW 481
Query: 464 QDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQE 523
++VA VR M G++K PG S +++ +++FVAGD ++ + IY L ++ ++
Sbjct: 482 EEVARVRSMMKASGIQKEPGCSAIEVGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQ 541
Query: 524 GYKPDISELFLGIEE 538
G+ P + ++E
Sbjct: 542 GHVPQTELVLHDLDE 556
>gi|356567054|ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 518
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 183/507 (36%), Positives = 279/507 (55%), Gaps = 60/507 (11%)
Query: 35 TLFQIHSQIIINGFSQKNYILAKLLAFYV--------TSGYLINAHKVFEKTENPSTAIW 86
TL QIH+ +I+NG + L KL+ TS + A ++F + P T +W
Sbjct: 16 TLKQIHALMIVNGLTSNVGFLRKLVLTTAMSMVGPNATSAVIRYALQMFAQIPQPDTFMW 75
Query: 87 NQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLA 146
N IRG ++S P +V LY QM + +PD +T+ F+L C + G VHGRVL
Sbjct: 76 NTYIRGSSQSHDPVHAVALYAQMDQRSVKPDNFTFPFVLKACTKLFWVNTGSAVHGRVLR 135
Query: 147 SGYCSNVFIRTNLMNLYLMSG------------------------------GECGVGCAR 176
G+ SNV +R L+ + G G+ V AR
Sbjct: 136 LGFGSNVVVRNTLLVFHAKCGDLKVATDIFDDSDKGDVVAWSALIAGYAQRGDLSV--AR 193
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
LFD+MP R +VSWN ++ Y K G+++ A ++FDE P +++VSW +I G +R+
Sbjct: 194 KLFDEMPKRDLVSWNVMITVYTKHGEMESARRLFDEAPMKDIVSWNALIGGYVLRNLNRE 253
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
AL LF+EM D+V +++ LSACA++GDL+ G+ +H+ + E + G+ L L N
Sbjct: 254 ALELFDEMCGVGECPDEVTMLSLLSACADLGDLESGEKVHAKIIE-MNKGKLSTL--LGN 310
Query: 297 ALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------- 343
AL+ MYA CG I +A VF ++ ++ VSW S+I+G A G+A+E+L
Sbjct: 311 ALVDMYAKCGNIGKAVRVFWLIRDKDVVSWNSVISGLAFHGHAEESLGLFREMKMTKVCP 370
Query: 344 --LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
+TF+GVL+ACSH G VDEG ++F M + I+P I H GC+VD+ RAGL+ EAF+
Sbjct: 371 DEVTFVGVLAACSHAGNVDEGNRYFHLMKNKYKIEPTIRHCGCVVDMLGRAGLLKEAFNF 430
Query: 402 VQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAK 461
+ +M ++PN V SLL C++H + ELA + ++L+ + +Q+ Y+ L++NVYA+
Sbjct: 431 IASMKIEPNAIVWRSLLGACKVHGDVELAKRANEQLL-RMRGDQSGDYV-LLSNVYASQG 488
Query: 462 RWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
W VR+ M GV K G S+V+
Sbjct: 489 EWDGAENVRKLMDDNGVTKNRGSSFVE 515
>gi|347954502|gb|AEP33751.1| chloroplast biogenesis 19, partial [Lepidium virginicum]
Length = 485
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 174/454 (38%), Positives = 271/454 (59%), Gaps = 34/454 (7%)
Query: 86 WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVL 145
W I +R ++V + M EP+ T+ LLS C G F G + G +L
Sbjct: 24 WTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITFIALLSAC---GNFPSGSEGLGYLL 80
Query: 146 ASGYC------SNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVK 199
C S+V + T ++ +Y SG + ARL+FD + ++ V+WN+++ GY++
Sbjct: 81 HGYACKLGLERSHVMVGTAILGMYSKSGH---LRKARLVFDYIEDKNSVTWNTMIDGYMR 137
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
G +D A +FD+MP R+++SWT MI+G + G +AL+ F EM+ + V D VA+++A
Sbjct: 138 NGQVDNAVDVFDKMPDRDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIISA 197
Query: 260 LSACAEIGDLKLGKWIHSYV-EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM 318
++AC +G L G W+H YV ++F R V VS N+LI +Y CG +E A VF KM
Sbjct: 198 VAACTNLGALSFGLWVHRYVLSQDF---RNNVRVS--NSLIDLYCRCGCVEFARQVFDKM 252
Query: 319 QRRNTVSWTSMITGFAKQGYAQEALL---------------TFLGVLSACSHGGFVDEGR 363
++R VSW S+I GFA G A E+L+ TF G L+ACSH G V+EG
Sbjct: 253 EKRTVVSWNSVIVGFAANGNANESLVYFRKMQREGFTPDGVTFTGALTACSHVGLVEEGF 312
Query: 364 QFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRI 423
Q+F+ M ++ I PRIEHYGC+VDL+SRAG +++AF +V++MPMKPN+ V+GSLL CR
Sbjct: 313 QYFQMMKHDYRISPRIEHYGCLVDLYSRAGRLEDAFIVVESMPMKPNEVVIGSLLAACRN 372
Query: 424 HNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPG 483
H N + ++ K + ++D + + Y+ L +N+YAA +W+ + +R+KM +G++K PG
Sbjct: 373 HGNHTILAERLMKYITDLDVKSHSNYVIL-SNMYAADGKWEGASKMRRKMKGLGLKKQPG 431
Query: 484 QSWVQINGVLHDFVAGDSTYKQASLIYKTLGEIT 517
S ++I+ H F+AGDS + + + I + L I+
Sbjct: 432 YSSIEIDDCTHVFMAGDSAHVETAYIREVLELIS 465
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 138/340 (40%), Gaps = 78/340 (22%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKE---- 113
+L Y SG+L A VF+ E+ ++ WN MI G+ R+ + +V ++ +M D++
Sbjct: 100 ILGMYSKSGHLRKARLVFDYIEDKNSVTWNTMIDGYMRNGQVDNAVDVFDKMPDRDLISW 159
Query: 114 ---------------------------TEPDEYTYSFLLSVCARCGLFREGEQVHGRVLA 146
PD ++ C G G VH VL+
Sbjct: 160 TAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIISAVAACTNLGALSFGLWVHRYVLS 219
Query: 147 SGYCSNVFIRTNLMNLYLMSGGECGVGC---ARLLFDDMPARSVVSWNSLLKGYVKRGDI 203
+ +NV + +L++LY C GC AR +FD M R+VVSWNS++ G+
Sbjct: 220 QDFRNNVRVSNSLIDLY------CRCGCVEFARQVFDKMEKRTVVSWNSVIVGF------ 267
Query: 204 DGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSAC 263
A NG + ++L F +M+R D V AL+AC
Sbjct: 268 -------------------------AANGNANESLVYFRKMQREGFTPDGVTFTGALTAC 302
Query: 264 AEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRN 322
+ +G ++ G ++ ++ + + L+ +Y+ G +E+A+ V M + N
Sbjct: 303 SHVGLVEEGFQYFQMMKHDYRISPR---IEHYGCLVDLYSRAGRLEDAFIVVESMPMKPN 359
Query: 323 TVSWTSMITGFAKQG---YAQEALLTFLGVLSACSHGGFV 359
V S++ G E L+ ++ L SH +V
Sbjct: 360 EVVIGSLLAACRNHGNHTILAERLMKYITDLDVKSHSNYV 399
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 116/257 (45%), Gaps = 51/257 (19%)
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEI--GDLKLGKWI 275
+VSWT+ I+ +++G+ +A+ F++MR A + + + +A LSAC G LG +
Sbjct: 21 IVSWTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITFIALLSACGNFPSGSEGLGYLL 80
Query: 276 HSYVEENFSVGREPVLVSLN-----------------------------NALIHMYASCG 306
H Y + + R V+V N +I Y G
Sbjct: 81 HGYACK-LGLERSHVMVGTAILGMYSKSGHLRKARLVFDYIEDKNSVTWNTMIDGYMRNG 139
Query: 307 EIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF---------------LGVLS 351
+++ A VF KM R+ +SWT+MITGF K+G+ +EAL F + ++
Sbjct: 140 QVDNAVDVFDKMPDRDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIISAVA 199
Query: 352 ACSHGGFVDEGRQFFE-CMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPN 410
AC++ G + G ++Q++ R+ + ++DL+ R G ++ A + M K
Sbjct: 200 ACTNLGALSFGLWVHRYVLSQDFRNNVRVSN--SLIDLYCRCGCVEFARQVFDKME-KRT 256
Query: 411 DAVLGSLLLGCRIHNNA 427
S+++G + NA
Sbjct: 257 VVSWNSVIVGFAANGNA 273
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H ++ F + L+ Y G + A +VF+K E + WN +I G A +
Sbjct: 213 VHRYVLSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGN 272
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
+S+ +++M + PD T++ L+ C+ GL EG Q
Sbjct: 273 ANESLVYFRKMQREGFTPDGVTFTGALTACSHVGLVEEGFQ 313
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 178/546 (32%), Positives = 293/546 (53%), Gaps = 61/546 (11%)
Query: 8 PANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY 67
PA+ T++ AL + L + + + + G ++L+ L+ Y + G
Sbjct: 117 PADQHTAACALKSCSRMCALDVGRG------VQAYAVKRGLVADRFVLSSLIHMYASCGD 170
Query: 68 LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSV 127
+ A VF+ E +WN ++ + ++ + V ++K M++ DE T +++
Sbjct: 171 VAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTA 230
Query: 128 CARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSV 187
C R G + G+ V G V G N + T LM++Y
Sbjct: 231 CGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMY------------------------ 266
Query: 188 VSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRA 247
K G+I A ++FD M R+VV+W+ MISG Q + R+AL LF+EM+ A
Sbjct: 267 ----------AKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLA 316
Query: 248 RVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGE 307
RV + V +V+ LSACA +G L+ GKW+HSYV R + L AL+ YA CG
Sbjct: 317 RVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRK----RLSLTTILGTALVDFYAKCGC 372
Query: 308 IEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSA 352
I++A F M +N+ +WT++I G A G +EAL +TF+GVL A
Sbjct: 373 IDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMA 432
Query: 353 CSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDA 412
CSH V+EGR+ F+ M +++GIKPR+EHYGCMVDL RAGL+DEA+ ++ MP++PN
Sbjct: 433 CSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAV 492
Query: 413 VLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQK 472
+ +LL C +H N + + +++++ ++P + Y+ L++N+YA+A +W+D A VR++
Sbjct: 493 IWRALLSSCAVHRNVGIGEEALKQIIS-LNPSHSGDYV-LLSNIYASAGQWKDAAMVRKE 550
Query: 473 MIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISEL 532
M G+ K PG S ++++GV+ +F A DS + + IY+ + E+ + GY P+ +++
Sbjct: 551 MKDRGIEKTPGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTADV 610
Query: 533 FLGIEE 538
L +EE
Sbjct: 611 RLEVEE 616
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 167/518 (32%), Positives = 288/518 (55%), Gaps = 27/518 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+++ I +G + +++ L+ Y+ + A ++F++ + + N M + R
Sbjct: 256 KVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQG 315
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++++ + M+D PD + +S C++ G+ HG VL +G+ S I
Sbjct: 316 LTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICN 375
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y+ + A +FD M ++VV+WNS++ GY++ G++D AW+ F+ MP +N
Sbjct: 376 ALIDMYMKCHRQ---DTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKN 432
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRAR-VGLDQVALVAALSACAEIGDLKLGKWIH 276
+VSW T+IS Q +A+ +F+ M+ V +D V +++ SAC +G L L KWI+
Sbjct: 433 IVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIY 492
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT--------- 327
Y+E+N R + V L L+ M++ CG+ E A +F + R+ +WT
Sbjct: 493 YYIEKN----RIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMA 548
Query: 328 -------SMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
+ +QG + ++ F+G L+AC HGG V +G++ F M + G+ P
Sbjct: 549 GNVERAIELFNEMIEQGLKPDGVV-FIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDV 607
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HYGCMVDL RAGL++EA L+++MP +PND + SLL CR+ N E+A+ A+K +
Sbjct: 608 HYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAAFAAEK-IQV 666
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
+ PE+ Y+ L++NVYA+A RW D+A VR M + G+RKPPG S +QI G H+F +GD
Sbjct: 667 LAPERTGSYV-LLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSVIQIRGKTHEFTSGD 725
Query: 501 STYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++ + I L E++ +A G+ PD+S + + ++E
Sbjct: 726 ESHPEMRKIEAMLDELSQRASDLGHVPDLSNVLMDVDE 763
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 196/427 (45%), Gaps = 59/427 (13%)
Query: 2 LVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAF 61
+V I + P+ +++ T+ S L+ T L H + G + KL+A
Sbjct: 13 MVLAISTSKPSLPNQSKRTKATPSSLKNCKTIDELKMFHLSLTKQGLDDDVSAITKLVAR 72
Query: 62 YVTSGY---LINAHKVFEKTENPSTA-IWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
G L A +VFE E+ T ++N +IRG+A S ++++ L+ +M++ PD
Sbjct: 73 SCELGTRESLSFAKEVFENGESYGTCFMYNSLIRGYASSGLCKEAILLFIRMMNSGISPD 132
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCAR 176
+YT+ F LSVCA+ G Q+HG ++ Y ++F++ +L++ Y ECG + CAR
Sbjct: 133 KYTFPFGLSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFY----AECGELDCAR 188
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
+FD+M R+VVSW S++ GY +R A +F
Sbjct: 189 KVFDEMSERNVVSWTSMICGYARREFAKDAVDLF-------------------------- 222
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
F +R V + V +V +SACA++ DL+ G+ ++ ++ ++ + +++S
Sbjct: 223 ----FRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDS-GIEVNDLMIS--- 274
Query: 297 ALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------- 343
AL+ MY C I+ A +F + N +M + + +QG +EAL
Sbjct: 275 ALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRP 334
Query: 344 --LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
++ L +S+CS + G+ + +N G + ++D++ + D AF +
Sbjct: 335 DRISMLSAISSCSQLRNILWGKSCHGYVLRN-GFESWDNICNALIDMYMKCHRQDTAFRI 393
Query: 402 VQNMPMK 408
M K
Sbjct: 394 FDRMSNK 400
>gi|225430143|ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 165/505 (32%), Positives = 293/505 (58%), Gaps = 31/505 (6%)
Query: 36 LFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHAR 95
L +IH+ I+ SQ ++++ K++ G A+ +F+ +P+ ++N MIR +
Sbjct: 30 LKKIHAHIVKFSLSQSSFLVTKMVDVCNHYGETEYANLLFKGVADPNAFLYNAMIRAYKH 89
Query: 96 SETPEKSVYLYKQMI-----DKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYC 150
++ ++ +YKQM+ + PD++T+ F++ CA + G+QVHG V G
Sbjct: 90 NKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQK 149
Query: 151 SNVFIRTNLMNLYLMSGGEC-GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKI 209
SN + +L+ +Y+ +C + A +F++M R VSWN+L+ G+V+ G + A I
Sbjct: 150 SNTVVENSLVEMYV----KCDSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQMRRARAI 205
Query: 210 FDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDL 269
F+EM + + SWT ++SG A+ G AL F M+ + D+++LV+ L CA++G L
Sbjct: 206 FEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGAL 265
Query: 270 KLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSM 329
+LGKWIH Y ++ + + + NALI MYA CG I++ +F +M+ R+ +SW++M
Sbjct: 266 ELGKWIHIYADKAGFLRN----ICVCNALIEMYAKCGSIDQGRRLFDQMKERDVISWSTM 321
Query: 330 ITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWG 374
I G A G A+EA+ +TF+G+L+AC+H G ++EG ++FE M +++
Sbjct: 322 IVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAGLLNEGLRYFESMKRDYN 381
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVA 434
I+P +EHYGC+V+L +G +D+A LV+ MP KP+ + GSLL CR H N ++A +A
Sbjct: 382 IEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGSLLSSCRSHGNLKIAV-IA 440
Query: 435 QKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLH 494
+ + E++P Y+ L++N+YA +W V+ +R+ M ++K PG S ++++ ++
Sbjct: 441 MEHLLELEPADTGNYV-LLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSSIEVDNMVQ 499
Query: 495 DFVAGDSTYKQASLIYKTLGEITMQ 519
+F +GD + + I + L + M
Sbjct: 500 EFASGDDSKPFSKAICRVLKLLVMH 524
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 178/510 (34%), Positives = 274/510 (53%), Gaps = 57/510 (11%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
H +I G + ++ L+ Y G + +A KVF++ WN MI G+++
Sbjct: 150 HCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHA 209
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
++V L+++M++ +P+E + +L C G + G V V+ + N F+ + L
Sbjct: 210 GEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSAL 269
Query: 160 MNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVV 219
+++Y G+CG D+ A +IFD M ++ V
Sbjct: 270 IHMY----GKCG------------------------------DLVSARRIFDSMKKKDKV 295
Query: 220 SWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV 279
+W MI+G AQNG S +A+ LF +MR + DQ+ L+ LSACA IG L LGK + Y
Sbjct: 296 TWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYA 355
Query: 280 EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYA 339
E G + V + AL+ MYA CG ++ A+ VF M +N VSW +MI+ A G A
Sbjct: 356 SER---GFQDD-VYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQA 411
Query: 340 QEAL-----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
QEAL +TF+GVLSAC H G VDEGR+ F M+ ++G+ P+IEHY
Sbjct: 412 QEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHY 471
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
CMVDLFSRAG ++EA+ V MP KP++ +LG+LL C+ N +++ +V KL+ E++
Sbjct: 472 SCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERV-MKLLLELE 530
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P + Y+ + + +YA +RW D A +R M + GV K PG SW+ IN LH+F AGD
Sbjct: 531 PSNSGNYV-ISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVL 589
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISEL 532
+++ I++ L + +EGY P+ + L
Sbjct: 590 HQEWIEIHQILDLLIDDLRREGYIPNANLL 619
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 224/474 (47%), Gaps = 72/474 (15%)
Query: 9 ANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKN---YILAKLLAFYVTS 65
+ P + +AL+ + SLLQ + K L QIH+Q++ N + N Y +A L F S
Sbjct: 22 SKPNPNRQALSDK-FNSLLQQCLSIKQLKQIHAQLLTNSIHKPNSFLYKIADLKDFAYAS 80
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARS-ETPEKSVYLYKQMIDKETEPDEYTYSFL 124
+ F +P+ +N MIRG + + ++ Y +M +P+ TY FL
Sbjct: 81 VF-------FSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFL 133
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMP 183
C+ G H V+ G + + +L+ +Y CG +G AR +FD++
Sbjct: 134 FIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMY----ARCGKMGDARKVFDEIS 189
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
+ +VSWNS++ GY K M H + +A+ LF E
Sbjct: 190 QKDLVSWNSMISGYSK-------------MRH------------------AGEAVGLFRE 218
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
M A ++++LV+ L AC E+GDLKLG W+ +V EN + + + +ALIHMY
Sbjct: 219 MMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVEN----KMTLNYFMGSALIHMYG 274
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLG 348
CG++ A +F M++++ V+W +MITG+A+ G ++EA+ +T +G
Sbjct: 275 KCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIG 334
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
+LSAC+ G +D G+Q E G + + +VD++++ G +D AF + MP K
Sbjct: 335 ILSACASIGALDLGKQ-VEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNK 393
Query: 409 PNDAVLGSLLLGCRIHNNAELASQVAQKLVAE---IDPEQAAGYLALVANVYAA 459
N+ +++ H A+ A + + ++ E + P L A V+A
Sbjct: 394 -NEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAG 446
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 183/512 (35%), Positives = 282/512 (55%), Gaps = 33/512 (6%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKTENPSTAIWNQMIRGH-A 94
Q HS ++ G S N+ ++++ F S G + A K+F NP T ++N + + +
Sbjct: 20 QQHSLLLRLGLSTNNHAMSRIFTFCSLSKHGDINYALKLFTTLPNPDTFLYNTLFKAFFS 79
Query: 95 RSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVF 154
S+TP S+ Y M+ P+ +T+ L+ C L E +Q+H VL G+ + +
Sbjct: 80 LSQTPSLSLLFYSHMLQHCVTPNAFTFPSLIRACK---LEEEAKQLHAHVLKFGFGGDTY 136
Query: 155 IRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP 214
NL+++Y G + AR +F M +VVSW SL+ GY + G +D A+++F+ MP
Sbjct: 137 ALNNLIHVYFAFGS---LDDARRVFCTMSDPNVVSWTSLVSGYSQWGLVDEAFRVFELMP 193
Query: 215 -HRNVVSWTTMISGCAQNGKSRQALSLFNEMR-RARVGLDQVALVAALSACAEIGDLKLG 272
+N VSW MI+ + + R+A +LF MR ++ LD+ LSAC +G L+ G
Sbjct: 194 CKKNSVSWNAMIACFVKGNRFREAFALFRRMRVEKKMELDRFVAATMLSACTGVGALEQG 253
Query: 273 KWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
WIH YVE+ V + L +I MY CG +++A+ VF ++ + SW MI G
Sbjct: 254 MWIHKYVEKTGIV----LDSKLATTIIDMYCKCGCLDKAFHVFCGLKVKRVSSWNCMIGG 309
Query: 333 FAKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIK 376
FA G ++A+ +TF+ VL+AC+H G V+EG +F M GI
Sbjct: 310 FAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTACAHSGLVEEGWYYFRYMVDVHGID 369
Query: 377 PRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQK 436
P EHYGCMVDL +RAG ++EA ++ MPM P+ AVLG+LL CRIH N EL +V +
Sbjct: 370 PTKEHYGCMVDLLARAGRLEEAKKVIDEMPMSPDAAVLGALLGACRIHGNLELGEEVGNR 429
Query: 437 LVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDF 496
++ E+DPE + Y+ L N+YA+ +W+ VA VR+ M GV+K PG S +++ GV+++F
Sbjct: 430 VI-ELDPENSGRYVIL-GNMYASCGKWEQVAGVRKLMDDRGVKKEPGFSMIEMEGVVNEF 487
Query: 497 VAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
VAG + A IY + E+ G+ PD
Sbjct: 488 VAGGRDHPLAEAIYAKIYEMLESIRVVGFVPD 519
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 179/494 (36%), Positives = 273/494 (55%), Gaps = 32/494 (6%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
++A YV + L+ A ++ + P WN MI G+ R E++ +++M + D
Sbjct: 223 MIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQED 282
Query: 118 EYTYSFLLSVCARC----GLFREGEQVHGRVLAS----GYCSNVFIRTNLMNLYLMSGGE 169
EYTY+ L+S C C G+F G QVHG +L + + + + L+ Y
Sbjct: 283 EYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRM 342
Query: 170 CGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCA 229
AR +FD MP R ++SWN++L GYV I+ A IF EMP RNV++WT MISG A
Sbjct: 343 IE---ARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLA 399
Query: 230 QNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREP 289
QNG + L LFN+M+ + A A++AC+ +G L G+ IHS V +G +
Sbjct: 400 QNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQV---IRLGHDS 456
Query: 290 VLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------ 343
L S NALI MY+ CG +E A VF M ++VSW +MI A+ G+ +A+
Sbjct: 457 GL-SAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQM 515
Query: 344 ---------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGL 394
+TFL +L+AC+H G + EGR +F+ M +GI P +HY ++DL RAG+
Sbjct: 516 MKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGM 575
Query: 395 MDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVA 454
+A S++++MP + + +LL GCRIH N EL Q A +L+ E+ P Q Y+ L +
Sbjct: 576 FLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLL-ELIPGQDGTYIIL-S 633
Query: 455 NVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLG 514
N+YAA +W +VA VR M + GV+K PG SWV++ ++H F+ D+ + + +Y L
Sbjct: 634 NMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQAVYTYLQ 693
Query: 515 EITMQAMQEGYKPD 528
++ + + GY PD
Sbjct: 694 QLVNEMKKLGYVPD 707
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/483 (22%), Positives = 191/483 (39%), Gaps = 93/483 (19%)
Query: 16 KALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVF 75
+ L R + L + T +H+ I+ +GF +IL +L+ Y S + A K+F
Sbjct: 4 RDLAYRYLTQLNHVSTTQIIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLF 63
Query: 76 EKTENPS---------------------------------TAIWNQMIRGHARSETPEKS 102
+K P T +N MI ++ +
Sbjct: 64 DKIPKPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAA 123
Query: 103 VYLYKQMIDKETEPDEYTYSFLLSVCARCG-LFREGEQVHGRVLASGYCSNVFIRTNLMN 161
+ L+ QM PD +T+S +LS + R + +H V+ G + L++
Sbjct: 124 LNLFVQMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLS 183
Query: 162 LYLMSGGECGV------GCARLLFDDMPARSVV--SWNSLLKGYVKRGDIDGAWKIFDEM 213
Y+ V AR +FD+ P + SW +++ GYV+ D+ A ++ D +
Sbjct: 184 CYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGL 243
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACA----EIGDL 269
+ V+W MISG + G +A F M + D+ + +SAC ++G
Sbjct: 244 TYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMF 303
Query: 270 KLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA-------------------------- 303
G+ +H Y+ ++S+NNALI Y
Sbjct: 304 NCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAV 363
Query: 304 -----SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------------- 343
+ IEEA +F +M RN ++WT MI+G A+ G+ +E L
Sbjct: 364 LSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCD 423
Query: 344 LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQ 403
F G ++ACS G +D G+Q + + G + ++ ++SR G+++ A S+
Sbjct: 424 YAFAGAITACSVLGSLDNGQQIHSQVIR-LGHDSGLSAGNALITMYSRCGVVESAESVFL 482
Query: 404 NMP 406
MP
Sbjct: 483 TMP 485
>gi|357498701|ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494654|gb|AES75857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1182
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 186/534 (34%), Positives = 295/534 (55%), Gaps = 31/534 (5%)
Query: 25 SLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTA 84
SL+ + + + Q H+ +I I K L V L AHK+F++ P
Sbjct: 184 SLIDLCKSINQIKQTHANLITTAQITLPVIANKFLK-NVALASLTYAHKLFDQIPQPDLF 242
Query: 85 IWNQMIRGHARS-ETPEKSVYLYKQMI-DKETEPDEYTYSFLLSVCARCGLFREGEQVHG 142
I+N MI+ H+ S + S+ +++ +I D P+ Y++ F C REGEQV
Sbjct: 243 IYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFVFAFGACGNGMCVREGEQVFT 302
Query: 143 RVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRG 201
+ G NVF+ L+ ++ G+ G V AR +FD R SWN+++ YV G
Sbjct: 303 HAVKVGLDGNVFVVNALIGMF----GKWGRVEDARNVFDSAVDRDFYSWNTMIGAYVGSG 358
Query: 202 DIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALS 261
++ A ++FDEM R+VVSW+T+I+G Q G +AL F++M ++ V ++ +V+AL+
Sbjct: 359 NMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKPNEYTMVSALA 418
Query: 262 ACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-R 320
AC+ + L GKWIH Y+ + + +L SL I MYA CGEI+ A VF + + +
Sbjct: 419 ACSNLVALDQGKWIHVYIRRDNIKMNDRLLASL----IDMYAKCGEIDSASSVFHEHKVK 474
Query: 321 RNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQF 365
R W +MI GFA G +EA+ +TF+ +L+ACSHG V EG+ +
Sbjct: 475 RKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACSHGYMVKEGKSY 534
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHN 425
FE M ++GI P IEHYGCMVDL SR+G + ++ ++ +MPM P+ A+ G+LL CRI+
Sbjct: 535 FELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWGALLNACRIYK 594
Query: 426 NAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQK-MIKMGVRKPPGQ 484
+ E ++ +++ EIDP G L+ N+Y+ + RW + VR+K I +K PG
Sbjct: 595 DMERGYRIG-RIIKEIDPNH-IGCNVLLGNIYSTSGRWNEARMVREKNEINSDRKKIPGF 652
Query: 485 SWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
S +++NGV H+F+ GD ++ Q+ IY L E+ + GY P++ E+ L ++
Sbjct: 653 SSIELNGVFHEFLVGDRSHPQSREIYSFLDEMISKLKIAGYVPELGEVLLDFDD 706
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 181/504 (35%), Positives = 273/504 (54%), Gaps = 39/504 (7%)
Query: 55 LAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKET 114
+A++ A VTSG L S + + +IR HA S P+ ++ LY +I
Sbjct: 36 IARIQAALVTSGLL-----------RRSAELHDALIRAHASSGRPQAALPLYAHLIRAGL 84
Query: 115 EPDEYTYSFLLSVCARC----GLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGEC 170
P +T LL A G R VH + G + + L+ ++ +G
Sbjct: 85 FPTPHTLPSLLKSLALSPAVPGARRLALAVHAHAVRLGLAGFLLVNNALIRVH--AGLLG 142
Query: 171 GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQ 230
+ A LL A ++N+L+ + + G + A +FDEMP RN VSW+ M++G Q
Sbjct: 143 RLADAHLLLRTSAAVDASTFNTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQ 202
Query: 231 NGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPV 290
G R+AL +F++M+ V D LV L+ACA++G L+ GKW+H Y++ N +
Sbjct: 203 AGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKAN----NIRM 258
Query: 291 LVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------- 343
V L AL+ MYA CGE++ VF M+ +N ++WT+MI G A G ++L
Sbjct: 259 TVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQME 318
Query: 344 --------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLM 395
+ F+G L AC+H G VD+GR+ F M N+GIKP+IEHYGCMVDL +R GL+
Sbjct: 319 SSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLL 378
Query: 396 DEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVAN 455
EA +V+ MPMKP+ + G+L+ GCR H N ELA V + + E++P+++ Y+ L+ N
Sbjct: 379 SEARDMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVIKHWI-ELEPDKSGAYV-LLGN 436
Query: 456 VYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGE 515
+Y+A+ R +R M + GV K PG S V+I GV+H F+ GD ++ + I E
Sbjct: 437 IYSASGRHASAREIRNLMREKGVEKTPGCSNVEIKGVIHQFIVGDLSHPRIKDILTKWYE 496
Query: 516 ITMQA-MQEGYKPDISELFLGIEE 538
I + ++EGY PD E+ L IEE
Sbjct: 497 IDSRIRLEEGYVPDKKEVLLDIEE 520
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 43/102 (42%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H + N ++ L+ Y G + +VFE ++ + W MI+G A
Sbjct: 247 VHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGR 306
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
S+ L+ QM +PD+ + L C GL +G ++
Sbjct: 307 GSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGREL 348
>gi|224119882|ref|XP_002318186.1| predicted protein [Populus trichocarpa]
gi|222858859|gb|EEE96406.1| predicted protein [Populus trichocarpa]
Length = 537
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 184/535 (34%), Positives = 288/535 (53%), Gaps = 39/535 (7%)
Query: 12 ATSSKALTTRQ----IFSLLQIRNTTKTLFQIHSQIIIN---GFSQKNYILAKLLAFYVT 64
++SS +T + I L++ T L Q+H+ I N F +L K L T
Sbjct: 4 SSSSNHITPQNYHSIIIKLIKQCKTISQLHQLHAYTITNTPLSFHSSPSLLTKFLYTLTT 63
Query: 65 -------SGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
+ L A +F +NPST +N +IR H P +++ + QM D
Sbjct: 64 KAKSKSSTSLLHYAKSIFNSIQNPSTFCYNTIIRVHTLLSFPIPALHFFTQMRRLSVPLD 123
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
+++ F L CA+ G +H +VL G+ S++++ +L++ Y++S A
Sbjct: 124 SHSFPFTLKACAQLGGVFSARCLHCQVLKFGFLSDLYVMNSLIHGYMVSDMS---NDAYK 180
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
+FD+ P R VVS+N L+ G+VK GD+ A ++FD MP R+ VSW T+I+GCA+ +A
Sbjct: 181 VFDESPQRDVVSYNVLIDGFVKAGDVVKARELFDLMPVRDSVSWNTIIAGCAKGDYCEEA 240
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
+ LF+ M + D VALV+ LSACA++G+L+ GK IH Y+E N V L+
Sbjct: 241 IELFDFMMDLEIRPDNVALVSTLSACAQLGELEKGKKIHDYIERN----AMKVDTFLSTG 296
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------------- 343
L+ YA CG ++ A +F +N +W +M+ G A GY + L
Sbjct: 297 LVDFYAKCGCVDIALKIFDSSSDKNLFTWNAMLVGLAMHGYGELLLEYFSRMIEAGVKPD 356
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
++ LGVL CSH G VDE R+ F+ M +G+ +HYGCM DL RAGL+ + ++
Sbjct: 357 GISILGVLVGCSHSGLVDEARKLFDEMESVYGVPREPKHYGCMADLLGRAGLIKKVMEMI 416
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKR 462
++MP + +V LL GCRIH + E+A + A+ L+ E+ P+ Y +++ANVYA A+R
Sbjct: 417 KDMPRGGDMSVWSGLLGGCRIHGDVEIAEKAAKHLM-ELKPDDGGVY-SILANVYANAER 474
Query: 463 WQDVAAVRQKM-IKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEI 516
W+DV +R+ + V K G S +Q++GV H+F+AGDS + ++ IY L I
Sbjct: 475 WEDVMNIRRSLSSNRVVTKIAGFSLIQLDGVAHEFIAGDSLHSESDKIYLVLNGI 529
>gi|226529055|ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea mays]
gi|194706828|gb|ACF87498.1| unknown [Zea mays]
Length = 570
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 175/494 (35%), Positives = 279/494 (56%), Gaps = 25/494 (5%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H + GF + ++ LL Y ++G L ++ + F++ + WN MI G+A++
Sbjct: 67 VHGVALKLGFVGQVFVANALLHSYASAGSLGDSRRFFDEMAGRNVVSWNSMIGGYAQAGD 126
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
++ L+ +M + DE+T + LL C++ G G VH +L SG ++ +
Sbjct: 127 TREACALFGEMRRQGFLGDEFTLASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLILGGA 186
Query: 159 LMNLYLMSGGECGVGC-ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y +CG C AR F+ MP +SVVSW S+L K G +D A FD MP RN
Sbjct: 187 LVDMY----SKCGDLCMARRCFEMMPIKSVVSWTSMLCAQTKHGSVDAARCWFDHMPERN 242
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VSW TMIS Q G+ +AL L+ +M+ D+ LV LSAC IGDL +GK +H
Sbjct: 243 TVSWNTMISCYVQRGQYHEALDLYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGKMVHL 302
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y+ +N P +SL N+L+ MYA CG+++ A +FR+M RN VSW +I G A G
Sbjct: 303 YIRDNI---HNPD-ISLINSLLDMYAKCGQVDTAIRLFREMCNRNVVSWNVIIGGLAMHG 358
Query: 338 YAQEAL--------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
A +A+ +TF+ +LS+CSHGG ++ G+ +FE M + +K +EHY
Sbjct: 359 RALDAITFFRSMVRNTSPDGITFVALLSSCSHGGLLETGQHYFESMRHVYNVKHEVEHYA 418
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
CMVDL R G +++A L++ MPMKP+ V G+LL CRIH N ++ QV ++L+ E++
Sbjct: 419 CMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHGNVKIGKQVIKQLL-ELEG 477
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
+ G L++N+ +W+D+ +R+ M + G RK G S ++IN +H+F D +
Sbjct: 478 -ISGGLFVLISNLLYETNQWEDMKRLRKLMKERGTRKDMGVSSIEINNSIHEFGVEDIRH 536
Query: 504 KQASLIYKTLGEIT 517
+ +S IY + +++
Sbjct: 537 ESSSEIYAVVDQLS 550
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 187/428 (43%), Gaps = 87/428 (20%)
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGL 133
+F+ +P ++N + R + S+ P +++ L++ M+ + P+E+T F++ C R
Sbjct: 1 MFDGILDPDRVMYNTITRAYCNSDCPREALRLHRCMLRRGVLPNEFTLPFVVKACTRAQA 60
Query: 134 FREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSL 193
+ VHG L G+ VF+ L++ Y +G +G +R FD+M R+VVSWNS+
Sbjct: 61 WDNALAVHGVALKLGFVGQVFVANALLHSYASAG---SLGDSRRFFDEMAGRNVVSWNSM 117
Query: 194 LKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQ 253
+ GY + GD +R+A +LF EMRR D+
Sbjct: 118 IGGYAQAGD-------------------------------TREACALFGEMRRQGFLGDE 146
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGE------ 307
L + L AC++ G+L+ G+ +H + V PV + L AL+ MY+ CG+
Sbjct: 147 FTLASLLLACSQEGNLEFGRLVHCLM----LVSGSPVDLILGGALVDMYSKCGDLCMARR 202
Query: 308 -------------------------IEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEA 342
++ A F M RNTVSW +MI+ + ++G EA
Sbjct: 203 CFEMMPIKSVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMISCYVQRGQYHEA 262
Query: 343 L---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVD 387
L T + VLSAC G + G+ + N P I ++D
Sbjct: 263 LDLYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGKMVHLYIRDNIH-NPDISLINSLLD 321
Query: 388 LFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAA 447
++++ G +D A L + M + N ++ G +H A A + +V P+
Sbjct: 322 MYAKCGQVDTAIRLFREMCNR-NVVSWNVIIGGLAMHGRALDAITFFRSMVRNTSPD-GI 379
Query: 448 GYLALVAN 455
++AL+++
Sbjct: 380 TFVALLSS 387
>gi|255540011|ref|XP_002511070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550185|gb|EEF51672.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 551
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 186/534 (34%), Positives = 293/534 (54%), Gaps = 37/534 (6%)
Query: 20 TRQIFSLLQIRNTTKTLFQIHSQIIINGF-----SQKNYILAKLLAFYVT-------SGY 67
+ I++L++ T L+Q+H+Q G IL K+L T
Sbjct: 27 SHSIYTLIRQCKTINQLYQVHAQAFTKGLLSLTACSSPQILTKILYALTTIPTPKSSFSL 86
Query: 68 LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSV 127
L A F+ +NPST +N +IR H + +++ + QM PD ++Y F L
Sbjct: 87 LHYAVSTFDNIQNPSTFCYNVIIRLHTLHSSALSALHFFLQMRRFSVPPDFHSYPFALKA 146
Query: 128 CARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSV 187
CA + + +H +V G+ S++++ +L+++Y S +C + A +FD+ R V
Sbjct: 147 CAHLRVLSLAQCLHSQVFKFGFVSDLYVINSLIHVY--SLFDC-LNYACQVFDESSDRDV 203
Query: 188 VSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRA 247
VS+N+L+ G+VK G+ A +IFD MP R+ VSW ++I+G AQ +A+ LF+ M
Sbjct: 204 VSYNALVDGFVKAGEFVKAREIFDLMPMRDSVSWGSLIAGYAQGSYCNEAIGLFDLMMGL 263
Query: 248 RVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGE 307
++ D +ALV+ALSACA++G+L+ GK IH Y+++N R L+ L+ YA G
Sbjct: 264 KLEPDNIALVSALSACAQLGELEKGKQIHDYIKKN----RIQADSFLSTGLVDFYAKSGC 319
Query: 308 IEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSA 352
I+ A VF ++ ++W +M+ G A G + L ++FLGVL
Sbjct: 320 IDTAIKVFELSPDKSLITWNAMLIGIAMHGNSHLLLNYFSRMMEAGIKPDGISFLGVLVG 379
Query: 353 CSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDA 412
CSHGG VDE ++ F+ M +G++ ++HYGCM DL +RAGL+ EA L + +PM +
Sbjct: 380 CSHGGLVDEAKKLFDEMESIYGVRRELKHYGCMADLLARAGLIKEAVELTKGLPMGGDIF 439
Query: 413 VLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQK 472
V LL GCRIH N E+A Q A++ V E+ PE Y +++ANVYA A RW+DV +R+
Sbjct: 440 VWSGLLGGCRIHGNIEIAEQAAKQ-VMELKPEDGGVY-SILANVYANADRWEDVVKIRRS 497
Query: 473 M-IKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGY 525
M V+K G+S +Q+ G+ H+F+AG+S + Q+S IY L I + Y
Sbjct: 498 MSSNRAVKKNAGRSSIQLGGLTHEFLAGESLHAQSSEIYMVLDGIREHQSEGSY 551
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 173/491 (35%), Positives = 279/491 (56%), Gaps = 37/491 (7%)
Query: 46 NGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYL 105
G Y+ L+ Y +F++ + WN MI G+ + E ++ +
Sbjct: 166 TGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYVKCRRFEDAINV 225
Query: 106 YKQMIDKE-TEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYL 164
+ +M ++ PDE T LS C G+++H V + + + I L+++Y
Sbjct: 226 FCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHHYVRDNVKFTPI-IGNALLDMY- 283
Query: 165 MSGGECGVGC---ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSW 221
C GC AR +F++MP+++V+ W +++ GY G+++ A ++F+ P R+VV W
Sbjct: 284 -----CKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEARELFEGSPIRDVVIW 338
Query: 222 TTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE 281
T MI+G Q + +A++LF EM+ +V D+ +V+ L+ CA+ G ++ GKWIH +++E
Sbjct: 339 TAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDE 398
Query: 282 NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQE 341
N R P+ + ALI MYA CG IE+A +F ++ ++T SWTS+I G A G +
Sbjct: 399 N----RIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSIICGLAMNGKTSK 454
Query: 342 AL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMV 386
AL +TF+GVLSACSHGG V+EGR+FF M + IKP++EHYGC+V
Sbjct: 455 ALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIKPKVEHYGCLV 514
Query: 387 DLFSRAGLMDEAFSLVQNMPMKPNDAV----LGSLLLGCRIHNNAELASQVAQKLVAEID 442
DL RAGL++EA L++ +P N A+ GSLL CRI+ N E+ +VA++LV
Sbjct: 515 DLLGRAGLLNEAEELIKKIP-DENKAITVPLYGSLLSACRIYGNVEMGERVAKQLVKFES 573
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
+ + L+AN+YA A RW+DV VR+KM +GV+K PG S ++++ ++H+F +G +
Sbjct: 574 SDSSVH--TLLANIYAFADRWEDVTKVRRKMKDLGVKKTPGCSSIEVDSIIHEFFSGHPS 631
Query: 503 YKQASLIYKTL 513
+ + IY L
Sbjct: 632 HPEMREIYYML 642
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 191/421 (45%), Gaps = 77/421 (18%)
Query: 9 ANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVT--SG 66
NP T L+ + S L+ + L QIH+QI G Q L KL+AF +G
Sbjct: 29 TNPTT---GLSQQSCISYLKSCKSMTHLKQIHAQIFRVGLHQDIVSLNKLMAFCTDPFNG 85
Query: 67 YLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLS 126
L A K+F+ P I+N +I+ A+ ++++ L+ ++ + PD +TY F+
Sbjct: 86 NLNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVFK 145
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARS 186
G + E++ G V +G + ++R +L+++Y ++LFD+MP R
Sbjct: 146 AIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLA---LTDVMKMLFDEMPDRD 202
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
V+SWN ++ GYVK + A +F M +
Sbjct: 203 VISWNVMISGYVKCRRFEDAINVFCRMQEES----------------------------- 233
Query: 247 ARVGL--DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYAS 304
GL D+ +V+ LSAC + L+LGK IH YV +N V P+ + NAL+ MY
Sbjct: 234 ---GLMPDEATVVSTLSACTALKRLELGKKIHHYVRDN--VKFTPI---IGNALLDMYCK 285
Query: 305 CGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQ 364
CG + A VF +M +N + WT+M++G+A G +EA R+
Sbjct: 286 CGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEA--------------------RE 325
Query: 365 FFECMNQNWGIKPR-IEHYGCMVDLFSRAGLMDEAFSLVQNM---PMKPNDAVLGSLLLG 420
FE G R + + M++ + + DEA +L + M +KP+ ++ SLL G
Sbjct: 326 LFE------GSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTG 379
Query: 421 C 421
C
Sbjct: 380 C 380
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 10/133 (7%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
IH I N + L+ Y G++ A ++F TA W +I G A +
Sbjct: 392 IHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSIICGLAMNGK 451
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE----------QVHGRVLASG 148
K++ L+ +M PD+ T+ +LS C+ GL EG Q+ +V G
Sbjct: 452 TSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIKPKVEHYG 511
Query: 149 YCSNVFIRTNLMN 161
++ R L+N
Sbjct: 512 CLVDLLGRAGLLN 524
>gi|414885389|tpg|DAA61403.1| TPA: hypothetical protein ZEAMMB73_616465 [Zea mays]
Length = 506
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 180/482 (37%), Positives = 271/482 (56%), Gaps = 62/482 (12%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTA---IWNQMI 90
+ L Q+H+Q+++NGF+ K ++LAKLL+ V + L A +F + PS A + N ++
Sbjct: 48 RGLDQLHAQLLLNGFTHKRFLLAKLLSLTVAAADLPRAESLFILSVPPSPASPTLANLLL 107
Query: 91 RGHARS-ETPEKSVYLYKQMID-KETEPDEYTYSFLLSVCARCGL--FREGEQVHGRVLA 146
R A S TP + +++ P+ +T+S LL+ A G+ G +H LA
Sbjct: 108 RTAATSGSTPSALLAFLSRLVGCHGLRPNAFTFSTLLAAFAPAGVGALPHGRALHALALA 167
Query: 147 SGYCSNV----FIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGD 202
SG + + T+L+++Y +G AR FD+M R+V +WN +L YV+ +
Sbjct: 168 SGVLAQTGDSGHVMTSLVSVY---ASAQQLGDARKAFDEMSTRAVAAWNCMLAAYVRCRE 224
Query: 203 IDGAWKIFDEMPH--RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
+D A + F EMP+ R+VVSWTTMI GCA
Sbjct: 225 VDAALRFFSEMPNSRRDVVSWTTMIGGCAN------------------------------ 254
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
+ACAE+GDL+LG+W+H+ V+ G + V L+NALIHMY CG +E+A+ +F M R
Sbjct: 255 AACAELGDLELGRWVHARVDLE---GWQRRTVLLDNALIHMYVKCGAVEDAHRLFGMMPR 311
Query: 321 RNTVSWTSMITGFAKQGYAQEAL------------LTFLGVLSACSHGGFVDEGRQFFEC 368
R++VSWT+MI+G A G+ QEAL T L VL ACS G +D+ R +FE
Sbjct: 312 RSSVSWTTMISGLAMHGHPQEALDLFQRMQDRPDGATLLAVLRACSLAGRIDDARWYFES 371
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAE 428
M + +GI P I+HYGCMVD+ ++EA LV+ MP +PN+ G++L GCR N E
Sbjct: 372 MERVYGINPEIQHYGCMVDMLCCWRRLNEALELVEKMPFQPNEGAWGAILSGCRREGNLE 431
Query: 429 LASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
LA++V +LV E+ P +AAG+L L++N+YA +W+ VR+++ + KP G+SWV
Sbjct: 432 LAAKVTNRLV-ELQPARAAGHLVLLSNMYACVGQWEQAQMVRERVAALNAEKPAGRSWVN 490
Query: 489 IN 490
N
Sbjct: 491 QN 492
>gi|357453191|ref|XP_003596872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240903|gb|ABD32761.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355485920|gb|AES67123.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 182/475 (38%), Positives = 266/475 (56%), Gaps = 30/475 (6%)
Query: 76 EKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARC---G 132
K + T W I H ++ K+ + QM++ E EP+ T LLS CA
Sbjct: 45 HKPNSNQTVSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACAHSPSKT 104
Query: 133 LFREGEQVHGRVLASGYCSN-VFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSW 190
G +H G+ N V + T L+++Y +CG + ARL+FD M R++VSW
Sbjct: 105 SITFGAALHTHAFKHGFAMNDVMVGTALIDMY----AKCGKLDYARLVFDQMGVRNLVSW 160
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG 250
N+++ GY+K GD+D A K+FD++P +NVVSWT +I G + +AL F EM+ A V
Sbjct: 161 NTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVV 220
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEE 310
D V ++A +SACA +G L LG W+H V + VL N+LI MYA CG IE
Sbjct: 221 PDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDNVKVL----NSLIDMYARCGCIEL 276
Query: 311 AYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSH 355
A VF M +RN VSW S+I GFA G A +AL +++ L+ACSH
Sbjct: 277 ARQVFDGMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVSYTSALTACSH 336
Query: 356 GGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLG 415
G +DEG + F + ++ PRIEHYGC+VDL+SRAG + EA+ +++ MPM PN+ VLG
Sbjct: 337 AGLIDEGLKIFADIKRDHRNSPRIEHYGCLVDLYSRAGRLKEAWDVIKKMPMMPNEVVLG 396
Query: 416 SLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIK 475
SLL CR + ELA +V K E+ P + Y+ L +N+YAA +W + VR++M +
Sbjct: 397 SLLAACRTQGDVELAEKV-MKYQVELYPGGDSNYV-LFSNIYAAVGKWDGASKVRREMKE 454
Query: 476 MGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
G++K S ++I+ +H FV+GD +++ IY L ++ + GY PD S
Sbjct: 455 RGLQKNLAFSSIEIDSGIHKFVSGDKYHEENDYIYSALELLSFELHLYGYVPDFS 509
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 136/298 (45%), Gaps = 47/298 (15%)
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
Y+ +G + +A K+F+K + W +I G + E E+++ +++M PD T
Sbjct: 167 YMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPDFVTV 226
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFD 180
++S CA G G VH V+ + NV + +L+++Y CG + AR +FD
Sbjct: 227 IAIISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMY----ARCGCIELARQVFD 282
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR----NVVSWTTMISGCAQNGKSRQ 236
M R++VSWNS++ G+ G D A F M N VS+T+ ++ C+ G +
Sbjct: 283 GMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVSYTSALTACSHAGLIDE 342
Query: 237 ALSLFNEMRR------------------ARVGL---------------DQVALVAALSAC 263
L +F +++R +R G ++V L + L+AC
Sbjct: 343 GLKIFADIKRDHRNSPRIEHYGCLVDLYSRAGRLKEAWDVIKKMPMMPNEVVLGSLLAAC 402
Query: 264 AEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR 321
GD++L + + Y E + G ++ N +YA+ G+ + A V R+M+ R
Sbjct: 403 RTQGDVELAEKVMKYQVELYPGGDSNYVLFSN-----IYAAVGKWDGASKVRREMKER 455
>gi|297737154|emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 184/555 (33%), Positives = 305/555 (54%), Gaps = 59/555 (10%)
Query: 23 IFSLLQIRNTTKTLFQIHSQIII-NGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENP 81
I ++ T K+L IH++++I + + +++ KLL Y G AHKVF++ P
Sbjct: 5 ILHIIHNCKTLKSLKSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQP 64
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVH 141
+ +W +I G+ + +++ L+ QM + +T S +L AR F+ G+ V+
Sbjct: 65 NAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVY 124
Query: 142 G--------------RVLASGYCSN--------VFIRTNLMNLYLMSGGECG------VG 173
G ++ SGY +N F R N+ + CG +
Sbjct: 125 GFAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVSWTSMICGYVKAGDMA 184
Query: 174 CARLLFDDMPARSVVSWNSLLKGYVKRGD-IDGAWKIFDEMPHRNVVSWTTMISGCAQNG 232
A++LFD MP + + SWN ++ GY+ GD +GA +FD+MP +N+V+W+TMI G A+NG
Sbjct: 185 EAQVLFDSMPVKDLASWNVMVSGYMDIGDYTNGARCLFDQMPMKNLVTWSTMIGGYARNG 244
Query: 233 KSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK-WIHSYVEENFSVGREPVL 291
+ +AL LF + + D+ ++ +SAC+++G + + IH+YV P L
Sbjct: 245 QPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNYVG--------PSL 296
Query: 292 VS---LNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----- 343
+S + +LI MYA CG IE+A +F ++ + +++MI A G ++A+
Sbjct: 297 LSDLRVFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDK 356
Query: 344 ----------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAG 393
+TFLGVL+AC+HGG VDEGR++F+ M + +GI+P +HY C+VDL R G
Sbjct: 357 MQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVG 416
Query: 394 LMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALV 453
++EA++L++NMP+ P+ V G+LL CR+H N +LA A +L +I+P+ + Y+ L+
Sbjct: 417 CLEEAYNLIRNMPIAPHSVVWGALLAACRVHCNVQLAEVAAAELF-KIEPDNSGNYI-LL 474
Query: 454 ANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTL 513
+N+YAAA RW VA VR K+ + VRK G SW++++ V+H+FV GD ++ + I L
Sbjct: 475 SNIYAAAGRWGSVAKVRAKIREHRVRKNRGSSWIELSHVVHEFVMGDMSHTDSDSISLIL 534
Query: 514 GEITMQAMQEGYKPD 528
+ GY D
Sbjct: 535 YLLCEDMKLSGYLID 549
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 180/538 (33%), Positives = 289/538 (53%), Gaps = 34/538 (6%)
Query: 25 SLLQIRNTTKTL---FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENP 81
SLL NT + L +IHS I G + L+ Y + A ++F++
Sbjct: 263 SLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKR 322
Query: 82 STAIWNQMIRGHARS-----ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
W+ MI G+A+S E+ ++ L ++M + P++ T+ +L C G +
Sbjct: 323 DVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQ 382
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLK 195
G Q+H + G+ + ++T + N+Y +CG + A +F M ++VV+W S L
Sbjct: 383 GRQIHAELSKVGFELDRSLQTAIFNMY----AKCGSIYEAEQVFSKMANKNVVAWTSFLS 438
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVA 255
Y+K GD+ A K+F EMP RNVVSW MI+G AQNG + L + M+ D+V
Sbjct: 439 MYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVT 498
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
++ L AC + L+ GK +H+ E +G E V + +LI MY+ CG++ EA VF
Sbjct: 499 VITILEACGALAGLERGKLVHA---EAVKLGLESDTV-VATSLIGMYSKCGQVAEARTVF 554
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVD 360
KM R+TV+W +M+ G+ + G EA+ +T V+SACS G V
Sbjct: 555 DKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQ 614
Query: 361 EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
EGR+ F M +++ + PR +HYGCMVDL RAG + EA +Q+MP +P+ +V +LL
Sbjct: 615 EGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGA 674
Query: 421 CRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRK 480
C+ HNN +LA + A ++ E++P A+ Y+ L +N+YA A RW D VR+ M G++K
Sbjct: 675 CKSHNNVQLAERAAHHIL-ELEPSYASVYITL-SNIYAQAGRWDDSTKVRRVMDDRGLKK 732
Query: 481 PPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
G+S ++I+G +H FVA D + + I+ L +T + + GY PD+ + +++
Sbjct: 733 DRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPDMRFVLHDVDD 790
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 164/347 (47%), Gaps = 58/347 (16%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H Q+ G Y+ L+ FY + +A +VF + W+ MI +A +
Sbjct: 78 VHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNH 137
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
P K+ +++M D EP+ T+ +L C + +G ++H V A G ++V + T
Sbjct: 138 PAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATA 197
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
L+ +Y K G+I A ++F +M RNV
Sbjct: 198 LITMY----------------------------------SKCGEISVACEVFHKMTERNV 223
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
VSWT +I AQ+ K +A L+ +M +A + + V V+ L++C L G+ IHS+
Sbjct: 224 VSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSH 283
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ E G E ++ + NALI MY C ++EA +F +M +R+ +SW++MI G+A+ GY
Sbjct: 284 ISER---GLETDMI-VANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGY 339
Query: 339 A-QEAL-------------------LTFLGVLSACSHGGFVDEGRQF 365
+E++ +TF+ +L AC+ G +++GRQ
Sbjct: 340 KDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQI 386
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 137/310 (44%), Gaps = 35/310 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH+ + G + L+ Y G + A +VF K + W +I+ +A+
Sbjct: 178 KIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHR 237
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++ LY+QM+ P+ T+ LL+ C G ++H + G +++ +
Sbjct: 238 KLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVAN 297
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+ +Y V AR +FD M R V+SW++++ GY + G D + DE+
Sbjct: 298 ALITMYCKCN---SVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDK--ESIDEV---- 348
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
L MRR V ++V ++ L AC G L+ G+ IH+
Sbjct: 349 --------------------FQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHA 388
Query: 278 YVEE-NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+ + F + R SL A+ +MYA CG I EA VF KM +N V+WTS ++ + K
Sbjct: 389 ELSKVGFELDR-----SLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKC 443
Query: 337 GYAQEALLTF 346
G A F
Sbjct: 444 GDLSSAEKVF 453
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 166/417 (39%), Gaps = 102/417 (24%)
Query: 120 TYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLF 179
TY ++ CA+ F +G+ VH ++ G ++++ +L+N Y S E V A +F
Sbjct: 58 TYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFY--SKFE-DVASAEQVF 114
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
M R VV+W+S++ Y A N +A
Sbjct: 115 RRMTLRDVVTWSSMIAAY-------------------------------AGNNHPAKAFD 143
Query: 240 LFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
F M A + +++ ++ L AC L+ G+ IH+ V+ ++G E V++ ALI
Sbjct: 144 TFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVK---AMGME-TDVAVATALI 199
Query: 300 HMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------L 344
MY+ CGEI A VF KM RN VSWT++I A+ EA +
Sbjct: 200 TMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAV 259
Query: 345 TFLGVLSAC----------------SHGGF-------------------VDEGRQFFECM 369
TF+ +L++C S G V E R+ F+ M
Sbjct: 260 TFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRM 319
Query: 370 NQNWGIKPRIEHYGCMVDLFSRAGL-----MDEAFSLVQNMPMK---PNDAVLGSLLLGC 421
+ K + + M+ ++++G +DE F L++ M + PN S+L C
Sbjct: 320 S-----KRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRAC 374
Query: 422 RIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
H E Q+ +L +++ E + N+YA + V KM V
Sbjct: 375 TAHGALEQGRQIHAEL-SKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNV 430
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 93/189 (49%), Gaps = 20/189 (10%)
Query: 232 GKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL 291
G+ R+A+ L +++ + ++ + CA+ + GK +H ++E +G E +
Sbjct: 35 GRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDE---LGVE-ID 90
Query: 292 VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------- 343
+ L N+LI+ Y+ ++ A VFR+M R+ V+W+SMI +A + +A
Sbjct: 91 IYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTD 150
Query: 344 -------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMD 396
+TFL +L AC++ +++GR+ + + G++ + ++ ++S+ G +
Sbjct: 151 ANIEPNRITFLSILKACNNYSILEKGRKIHTIV-KAMGMETDVAVATALITMYSKCGEIS 209
Query: 397 EAFSLVQNM 405
A + M
Sbjct: 210 VACEVFHKM 218
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 171/487 (35%), Positives = 271/487 (55%), Gaps = 30/487 (6%)
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
YV G + A VFE+ + +WN MI G+ +S + L+++M+ ++ DE+T+
Sbjct: 242 YVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTF 301
Query: 122 SFLLSVCARCGLFREGEQVHGRV--LASGYCSNVFIRTN--LMNLYLMSGGECGVGCARL 177
+ +LS CA G F G+ VHG++ L + + N L+ LY G + A+
Sbjct: 302 TSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGK---IVIAKR 358
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
+FD M + VVSWN++L GY+ G +D A ++F MP++N +SW M+SG G S A
Sbjct: 359 IFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDA 418
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY-VEENFSVGREPVLVSLNN 296
L LFN+MR V A++AC E+G LK G+ +H++ V+ F S N
Sbjct: 419 LKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASN-----SAGN 473
Query: 297 ALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------- 343
AL+ MYA CG + +A VF M ++VSW +MI+ + G+ +EAL
Sbjct: 474 ALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDP 533
Query: 344 --LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
++FL +L+AC+H G VDEG +FE M +++GI P +HY ++DL R+G + EA L
Sbjct: 534 DRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDL 593
Query: 402 VQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAK 461
++ MP +P ++ ++L GCR + + E + A +L I P+ Y+ L++N Y+AA
Sbjct: 594 IKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMI-PQHDGTYI-LLSNTYSAAG 651
Query: 462 RWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAM 521
RW D A VR+ M GV+K PG SW+++ +H F+ GD+ + +A +Y+ L I +
Sbjct: 652 RWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMR 711
Query: 522 QEGYKPD 528
+ GY PD
Sbjct: 712 KLGYVPD 718
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 164/339 (48%), Gaps = 23/339 (6%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENP--STAIWNQMIRGHARSETPEKSVYLYKQMIDKET- 114
L+A +G L +A F+ T + N M+ AR+ +V ++ ++ +
Sbjct: 98 LVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSL 157
Query: 115 EPDEYTYSFLLSVCARCGLFREGE--QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV 172
PD+Y+++ L+S + Q+H VL SG + + + L+ LY+
Sbjct: 158 RPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEAS 217
Query: 173 GCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNG 232
AR + D+MP + ++W +++ GYV+RGD++ A +F+E+ + V W MISG Q+G
Sbjct: 218 WDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSG 277
Query: 233 KSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV---EENFSVGREP 289
A LF M +V LD+ + LSACA G GK +H + + NF
Sbjct: 278 MCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFV---PE 334
Query: 290 VLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------ 343
+ +NNAL+ +Y+ G+I A +F M ++ VSW ++++G+ G +A+
Sbjct: 335 AALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVM 394
Query: 344 -----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
L+++ ++S HGG ++ + F M +KP
Sbjct: 395 PYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAE-DVKP 432
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 138/319 (43%), Gaps = 46/319 (14%)
Query: 27 LQIRNTTKTLFQIHSQIII-----NGFSQKNYI-LAKLLAFYVTSGYLINAHKVFEKTEN 80
L + N TL+ +I+I + + K+ + +L+ Y+ SG L A +VF+
Sbjct: 337 LPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPY 396
Query: 81 PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
+ W M+ G+ E ++ L+ QM ++ +P +YTY+ ++ C G + G Q+
Sbjct: 397 KNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQL 456
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVK 199
H ++ G+ ++ L+ +Y +CG V ARL+F MP VSWN+
Sbjct: 457 HAHLVQCGFEASNSAGNALLTMY----AKCGAVNDARLVFLVMPNLDSVSWNA------- 505
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
MIS Q+G R+AL LF++M + D+++ +
Sbjct: 506 ------------------------MISALGQHGHGREALELFDQMVAEGIDPDRISFLTI 541
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
L+AC G + G ++ +F + + LI + G I EA + + M
Sbjct: 542 LTACNHAGLVDEGFHYFESMKRDFGISPGEDHYA---RLIDLLGRSGRIGEARDLIKTMP 598
Query: 320 RRNTVS-WTSMITGFAKQG 337
T S W ++++G G
Sbjct: 599 FEPTPSIWEAILSGCRTNG 617
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 182/524 (34%), Positives = 286/524 (54%), Gaps = 57/524 (10%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
+LA YV +G + +A ++FE + WN M+ G+ + + + + D+ E D
Sbjct: 179 MLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVK----RNRLVDARGIFDRMPERD 234
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGG--------- 168
E +++ ++S A+ G E + R+ +VF T +++ Y+ +G
Sbjct: 235 EVSWNTMISGYAQNGELLEAQ----RLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFD 290
Query: 169 ------------------ECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKI 209
+C + AR LF+ MP ++V SWN+++ GY + GDI A
Sbjct: 291 GMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNF 350
Query: 210 FDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDL 269
FD MP R+ +SW +I+G AQ+G +AL LF EM+R L++ + LS CAEI L
Sbjct: 351 FDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAAL 410
Query: 270 KLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSM 329
+LGK +H V G E + NAL+ MY CG I++AY VF ++ + VSW +M
Sbjct: 411 ELGKQVHGRV---VKAGLESGCY-VGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTM 466
Query: 330 ITGFAKQGYAQEALLTF---------------LGVLSACSHGGFVDEGRQFFECMNQNWG 374
I G+A+ G+ +EAL+ F +GVLSACSH G VD+G ++F M Q++G
Sbjct: 467 IAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYG 526
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVA 434
I +HY CM+DL RAG +D+A +L++NMP +P+ A G+LL RIH N EL + A
Sbjct: 527 ITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAA 586
Query: 435 QKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLH 494
K++ E++P+ + Y+ L++N+YAA+ RW DV +R +M GV+K PG SWV++ +H
Sbjct: 587 -KMIFEMEPDNSGMYV-LLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIH 644
Query: 495 DFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
F GDS + + IY L E+ ++ +EGY + +EE
Sbjct: 645 TFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEE 688
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 179/422 (42%), Gaps = 86/422 (20%)
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
A ++FEK WN MI G R + L+ QM E D +++ +LS A+
Sbjct: 99 ARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQM----PERDVVSWNAMLSGYAQ 154
Query: 131 CGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSW 190
G +E +++ + C N ++ Y+ +G + AR LF+ ++SW
Sbjct: 155 NGYVKEAKEIFDEMP----CKNSISWNGMLAAYVQNG---RIEDARRLFESKADWELISW 207
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG 250
N ++ GYVKR + A IFD MP R+ VSW TMISG AQNG+ +A LF E
Sbjct: 208 NCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEE----SPV 263
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL------------------- 291
D A +S + G L + + + E SV ++
Sbjct: 264 RDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAM 323
Query: 292 ----VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---- 343
VS N +I YA G+I +A F +M +R+++SW ++I G+A+ GY +EAL
Sbjct: 324 PCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFV 383
Query: 344 -----------LTFLGVLSACS-----------HGGFVDEGRQ------------FFECM 369
TF LS C+ HG V G + + +C
Sbjct: 384 EMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCG 443
Query: 370 NQN------WGIKPR-IEHYGCMVDLFSRAGLMDEAFSLVQNMP---MKPNDAVLGSLLL 419
N + GI+ + + + M+ ++R G EA L ++M + P+D + +L
Sbjct: 444 NIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLS 503
Query: 420 GC 421
C
Sbjct: 504 AC 505
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 152/359 (42%), Gaps = 72/359 (20%)
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
++ +G +A ++F S+ WN MI G ++ YL +Q+ +K D ++
Sbjct: 59 HMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSND----KFYLARQLFEKMPTRDLVSW 114
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDD 181
+ ++S C R R ARLLFD
Sbjct: 115 NVMISGCVRYRNLR--------------------------------------AARLLFDQ 136
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
MP R VVSWN++L GY + G + A +IFDEMP +N +SW M++ QNG+ A LF
Sbjct: 137 MPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLF 196
Query: 242 NEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHM 301
++ + ++ + + L + I + E V N +I
Sbjct: 197 ----ESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSW--------NTMISG 244
Query: 302 YASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSH------ 355
YA GE+ EA +F + R+ +WT+M++G+ + G EA F G+ S
Sbjct: 245 YAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAII 304
Query: 356 GGFV-----DEGRQFFECMN-QNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
G+V D+ R+ FE M QN + + M+ +++ G + +A + MP +
Sbjct: 305 AGYVQCKRMDQARELFEAMPCQN------VSSWNTMITGYAQNGDIAQARNFFDRMPQR 357
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 120/283 (42%), Gaps = 68/283 (24%)
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM- 244
+V WN + +++ G D A ++F+ MP R+ +SW MISGC N K A LF +M
Sbjct: 48 DIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMP 107
Query: 245 --------------------RRARVGLDQ------VALVAALSACAEIGDLKLGK----- 273
R AR+ DQ V+ A LS A+ G +K K
Sbjct: 108 TRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDE 167
Query: 274 --------W---IHSYVEEN--------FSVGREPVLVSLNNALIHMYASCGEIEEAYGV 314
W + +YV+ F + L+S N ++ Y + +A G+
Sbjct: 168 MPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISW-NCMMGGYVKRNRLVDARGI 226
Query: 315 FRKMQRRNTVSWTSMITGFAKQGYAQEA-----------LLTFLGVLSACSHGGFVDEGR 363
F +M R+ VSW +MI+G+A+ G EA + T+ ++S G +DE R
Sbjct: 227 FDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEAR 286
Query: 364 QFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP 406
+ F+ M + + + ++ + + MD+A L + MP
Sbjct: 287 RVFDGMPEKNSVS-----WNAIIAGYVQCKRMDQARELFEAMP 324
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H +++ G Y+ LL Y G + +A+ VFE E WN MI G+AR
Sbjct: 415 QVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHG 474
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG-EQVHGRVLASGYCSNVFIR 156
++++ L++ M PD+ T +LS C+ GL +G E + G +N
Sbjct: 475 FGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHY 534
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPAR-SVVSWNSLL 194
T +++L +G + A+ L +MP +W +LL
Sbjct: 535 TCMIDLLGRAG---RLDDAQNLMKNMPFEPDAATWGALL 570
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 108/249 (43%), Gaps = 33/249 (13%)
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
++V W I+ +NG+ AL LFN M R ++ A +S C L + +
Sbjct: 48 DIVKWNIAITNHMRNGQCDSALRLFNSMPRR----SSISWNAMISGCLSNDKFYLARQL- 102
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
F LVS N +I + A +F +M R+ VSW +M++G+A+
Sbjct: 103 ------FEKMPTRDLVSW-NVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQN 155
Query: 337 GYAQEAL-----------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCM 385
GY +EA +++ G+L+A G +++ R+ FE +W + + CM
Sbjct: 156 GYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFES-KADW----ELISWNCM 210
Query: 386 VDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQ 445
+ + + + +A + MP + ++ +++ G N EL AQ+L E
Sbjct: 211 MGGYVKRNRLVDARGIFDRMPER-DEVSWNTMISG--YAQNGELLE--AQRLFEESPVRD 265
Query: 446 AAGYLALVA 454
+ A+V+
Sbjct: 266 VFTWTAMVS 274
>gi|357503973|ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355497290|gb|AES78493.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 541
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 181/529 (34%), Positives = 300/529 (56%), Gaps = 51/529 (9%)
Query: 27 LQIRNTTKTLFQ----------IHSQII---INGFSQKNYILAKLLAFYVTSGY--LINA 71
L ++NT TL + IH+ I+ I + Y+ +LL F S Y A
Sbjct: 16 LTLKNTLSTLIEQCKNLKEIKIIHTHILKSPILHTRDQYYLFTRLLYFCSFSNYASFNYA 75
Query: 72 HKVFEKTENPSTAIWNQMIR------GHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
+ VF + P ++N MIR G S K++ LYKQM++K P+ T+ FL+
Sbjct: 76 NNVFHMIKYPELRVYNIMIRSYGCIEGGDDSNCCYKALMLYKQMLNKGIVPNNLTFPFLV 135
Query: 126 SVCARCGLFRE-GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPA 184
C+R GE +H VL G+ ++VF+ +L++L++ G AR +FD+M
Sbjct: 136 KGCSRLQYGGTVGEVIHAHVLKFGFLNDVFVGNSLISLFMNFGLSKN---ARKVFDEMFV 192
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
R VVSWNS++ GY++ G+++ A +F +M RN+++W ++I+G Q G ++++L +F+EM
Sbjct: 193 RDVVSWNSMVVGYLRNGEVEMALNLFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHEM 252
Query: 245 RRAR----VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIH 300
+ V D++ + + LSACA +G + GKW+H+Y+ +N V + AL++
Sbjct: 253 QFLSGDDVVKPDKITIASVLSACALLGSIDHGKWVHAYLRKN----DIECDVVIGTALVN 308
Query: 301 MYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LT 345
MY CG++++A +F M ++ +WT+MI+ FA G+ ++A +T
Sbjct: 309 MYGKCGDVQQAIEIFNDMPEKDASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVT 368
Query: 346 FLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
F+G+LSACSH G V++GR F+ M + + I+P+I HY CMVD+ SRA L DEA L+++M
Sbjct: 369 FVGLLSACSHSGLVEQGRCCFDVMKRVYSIEPQIYHYACMVDILSRARLFDEALFLIRSM 428
Query: 406 PMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQD 465
PMKP+ V G+LL GC++H N +L +VA L+ +++P A Y+ L ++Y A ++
Sbjct: 429 PMKPDVYVWGALLGGCQMHGNIKLGEKVAHYLI-DLEPHNHAFYINL-CDIYVKAGKYDA 486
Query: 466 VAAVRQKMIKMGVR-KPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTL 513
+R M + G+ K PG S ++INGV+ +F G+ K+ L+ L
Sbjct: 487 AKRIRNSMKERGIETKIPGCSIIEINGVVQEFSVGEIPMKELPLVLDRL 535
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 191/551 (34%), Positives = 284/551 (51%), Gaps = 67/551 (12%)
Query: 8 PANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY 67
P + L+ +F L N K Q+H+ +++ G + +K++AFY +SG
Sbjct: 61 PLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGD 120
Query: 68 LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSV 127
+ ++ VF D +T+ F+L
Sbjct: 121 IDSSVSVFNGIG-------------------------------------DYFTFPFVLKS 143
Query: 128 CARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARS 186
G+ VHG +L G ++++ T+L+ LY G+CG + A +FD+M R
Sbjct: 144 SVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILY----GKCGEINDAGKVFDNMTIRD 199
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
V SWN+LL GY K G ID A IF+ MP RN+VSWTTMISG +Q+G ++QALSLF+EM +
Sbjct: 200 VSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVK 259
Query: 247 ARVGL--DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYAS 304
G+ + V +++ L ACA++ L+ G+ IH VL+ AL MYA
Sbjct: 260 EDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLI----ALTAMYAK 315
Query: 305 CGEIEEAYGVFRKMQR--RNTVSWTSMITGFAKQGYAQEAL---------------LTFL 347
CG + +A F K+ R +N ++W +MIT +A G+ +A+ +TF
Sbjct: 316 CGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFT 375
Query: 348 GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM 407
G+LS CSH G VD G ++F M+ + I PR+EHY C+ DL RAG + EA LV MPM
Sbjct: 376 GLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPM 435
Query: 408 KPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVA 467
++ GSLL CR H N E+A A+KL ++PE Y+ L++N+YA A RWQ+V
Sbjct: 436 PAGPSIWGSLLAACRKHRNLEMAETAARKLFV-LEPENTGNYV-LLSNMYAEAGRWQEVD 493
Query: 468 AVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
+R + G +K PG SW++ING H F+ GD+++ Q IY L + + GY P
Sbjct: 494 KLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFP 553
Query: 528 DISELFLGIEE 538
D S + I E
Sbjct: 554 DTSYVLHDISE 564
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 2/138 (1%)
Query: 2 LVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAF 61
L +E++ + +T + +T + QIH G + +L L A
Sbjct: 253 LFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAM 312
Query: 62 YVTSGYLINAHKVFEK-TENPSTAI-WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEY 119
Y G L++A F+K N I WN MI +A ++V +++MI +PD+
Sbjct: 313 YAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDI 372
Query: 120 TYSFLLSVCARCGLFREG 137
T++ LLS C+ GL G
Sbjct: 373 TFTGLLSGCSHSGLVDVG 390
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 173/496 (34%), Positives = 276/496 (55%), Gaps = 30/496 (6%)
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
YV G + A VFE+ + +WN MI G+ +S + L+++M+ ++ DE+T+
Sbjct: 244 YVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTF 303
Query: 122 SFLLSVCARCGLFREGEQVHGRV--LASGYCSNVFIRTN--LMNLYLMSGGECGVGCARL 177
+ +LS CA G F G+ VHG++ L + + N L+ LY GG+ + A+
Sbjct: 304 TSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLY-SKGGKIVI--AKR 360
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
+FD M + VVSWN++L GY+ G +D A ++F MP++N +SW M+SG G S A
Sbjct: 361 IFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDA 420
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY-VEENFSVGREPVLVSLNN 296
L LFN+MR V A++AC E+G LK G+ +H++ V+ F S N
Sbjct: 421 LKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASN-----SAGN 475
Query: 297 ALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------- 343
AL+ MYA CG + +A VF M ++VSW +MI+ + G+ +EAL
Sbjct: 476 ALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDP 535
Query: 344 --LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
++FL +L+AC+H G VDEG +FE M +++GI P +HY ++DL R+G + EA L
Sbjct: 536 DRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDL 595
Query: 402 VQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAK 461
++ MP +P ++ ++L GCR + + E + A +L I P+ Y+ L++N Y+AA
Sbjct: 596 IKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMI-PQHDGTYI-LLSNTYSAAG 653
Query: 462 RWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAM 521
RW D A VR+ M GV+K PG SW+++ +H F+ GD+ + +A +Y+ L I +
Sbjct: 654 RWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMR 713
Query: 522 QEGYKPDISELFLGIE 537
+ GY PD + +E
Sbjct: 714 KLGYVPDTKFVLHDME 729
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 165/339 (48%), Gaps = 23/339 (6%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENP--STAIWNQMIRGHARSETPEKSVYLYKQMIDKET- 114
L+A + +G L +A F+ T + N M+ AR+ +V ++ ++ +
Sbjct: 100 LVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSL 159
Query: 115 EPDEYTYSFLLSVCARCGLFREGE--QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV 172
PD+Y+++ L+S + Q+H VL SG + + + L+ LY+
Sbjct: 160 RPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEAS 219
Query: 173 GCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNG 232
AR + D+MP + ++W +++ GYV+RGD++ A +F+E+ + V W MISG Q+G
Sbjct: 220 WDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSG 279
Query: 233 KSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV---EENFSVGREP 289
A LF M +V LD+ + LSACA G GK +H + + NF
Sbjct: 280 MCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFV---PE 336
Query: 290 VLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------ 343
+ +NNAL+ +Y+ G+I A +F M ++ VSW ++++G+ G +A+
Sbjct: 337 AALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVM 396
Query: 344 -----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
L+++ ++S HGG ++ + F M +KP
Sbjct: 397 PYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAE-DVKP 434
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 138/319 (43%), Gaps = 46/319 (14%)
Query: 27 LQIRNTTKTLFQIHSQIII-----NGFSQKNYI-LAKLLAFYVTSGYLINAHKVFEKTEN 80
L + N TL+ +I+I + + K+ + +L+ Y+ SG L A +VF+
Sbjct: 339 LPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPY 398
Query: 81 PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
+ W M+ G+ E ++ L+ QM ++ +P +YTY+ ++ C G + G Q+
Sbjct: 399 KNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQL 458
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVK 199
H ++ G+ ++ L+ +Y +CG V ARL+F MP VSWN+
Sbjct: 459 HAHLVQCGFEASNSAGNALLTMY----AKCGAVNDARLVFLVMPNLDSVSWNA------- 507
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
MIS Q+G R+AL LF++M + D+++ +
Sbjct: 508 ------------------------MISALGQHGHGREALELFDQMVAEGIDPDRISFLTI 543
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
L+AC G + G ++ +F + + LI + G I EA + + M
Sbjct: 544 LTACNHAGLVDEGFHYFESMKRDFGISPGEDHYA---RLIDLLGRSGRIGEARDLIKTMP 600
Query: 320 RRNTVS-WTSMITGFAKQG 337
T S W ++++G G
Sbjct: 601 FEPTPSIWEAILSGCRTNG 619
>gi|357143748|ref|XP_003573036.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Brachypodium distachyon]
Length = 484
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 176/429 (41%), Positives = 254/429 (59%), Gaps = 41/429 (9%)
Query: 116 PDEYTYSFLLSVCA---RCGLFRE-GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG 171
P++ T +LS CA L R +H + C N+ + T L YL S
Sbjct: 66 PNDVTLLTVLSACAGDSSSALARPLALSLHALAVKLFPC-NLLLCTCLARFYLAS----- 119
Query: 172 VGCARL------LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMI 225
RL LFD MP RSVV++N+++ G ++ G + A ++FDEMP + VSWT +I
Sbjct: 120 ----RLPHLAIKLFDSMPDRSVVTYNTMITGLMRNGLVAAAREVFDEMPAPDKVSWTALI 175
Query: 226 SGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSV 285
GC +NG+ +A+ F+ M R V D V LVAA+SACAE+G L LG W+H +V +
Sbjct: 176 DGCVKNGRHDEAIDCFHSMLRDGVEPDYVTLVAAISACAEVGALGLGMWVHRFVVDK--- 232
Query: 286 GREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-- 343
R V + N+LI MYA CG+++ A VF ++++R VSW SMI GFA G +A+
Sbjct: 233 -RLEHNVRVANSLIDMYARCGQVDFARQVFGRIRKRTVVSWNSMIVGFAANGQYADAVEH 291
Query: 344 -------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFS 390
+TF GVL+ACSH G DEG ++++ M GI R+EHYGC+VDL
Sbjct: 292 FEAMRREGFKPDTVTFTGVLTACSHAGLTDEGLRYYDAMRTEHGIAARMEHYGCVVDLLG 351
Query: 391 RAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYL 450
RAG + EA +V++MPM+PN+ VLG+LL GCR+H + +LA Q+ Q L+ E DP + Y+
Sbjct: 352 RAGRLGEAMRVVESMPMRPNEVVLGALLAGCRMHGDVDLAEQLMQHLL-EQDPGGDSNYV 410
Query: 451 ALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIY 510
L++N+YAA +W VR M GV+K PGQS V+I+G +H+FV GD ++ QA ++
Sbjct: 411 -LLSNIYAAVGKWGGAGKVRSLMKSRGVKKRPGQSTVEIDGEVHEFVCGDRSHPQAREVF 469
Query: 511 KTLGEITMQ 519
+ LG +T +
Sbjct: 470 EVLGLLTHE 478
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 9/186 (4%)
Query: 65 SGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFL 124
+G + A +VF++ P W +I G ++ ++++ + M+ EPD T
Sbjct: 150 NGLVAAAREVFDEMPAPDKVSWTALIDGCVKNGRHDEAIDCFHSMLRDGVEPDYVTLVAA 209
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMP 183
+S CA G G VH V+ NV + +L+++Y CG V AR +F +
Sbjct: 210 ISACAEVGALGLGMWVHRFVVDKRLEHNVRVANSLIDMY----ARCGQVDFARQVFGRIR 265
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR----NVVSWTTMISGCAQNGKSRQALS 239
R+VVSWNS++ G+ G A + F+ M + V++T +++ C+ G + + L
Sbjct: 266 KRTVVSWNSMIVGFAANGQYADAVEHFEAMRREGFKPDTVTFTGVLTACSHAGLTDEGLR 325
Query: 240 LFNEMR 245
++ MR
Sbjct: 326 YYDAMR 331
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 118/289 (40%), Gaps = 10/289 (3%)
Query: 52 NYILAKLLA-FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMI 110
N +L LA FY+ S A K+F+ + S +N MI G R+ V +++
Sbjct: 105 NLLLCTCLARFYLASRLPHLAIKLFDSMPDRSVVTYNTMITGLMRNGL----VAAAREVF 160
Query: 111 DKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGG-E 169
D+ PD+ +++ L+ C + G E +L G + ++ G
Sbjct: 161 DEMPAPDKVSWTALIDGCVKNGRHDEAIDCFHSMLRDGVEPDYVTLVAAISACAEVGALG 220
Query: 170 CGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCA 229
G+ R + D +V NSL+ Y + G +D A ++F + R VVSW +MI G A
Sbjct: 221 LGMWVHRFVVDKRLEHNVRVANSLIDMYARCGQVDFARQVFGRIRKRTVVSWNSMIVGFA 280
Query: 230 QNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREP 289
NG+ A+ F MRR D V L+AC+ G G + + +
Sbjct: 281 ANGQYADAVEHFEAMRREGFKPDTVTFTGVLTACSHAGLTDEGLRYYDAMRTEHGIAAR- 339
Query: 290 VLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQG 337
+ ++ + G + EA V M R N V +++ G G
Sbjct: 340 --MEHYGCVVDLLGRAGRLGEAMRVVESMPMRPNEVVLGALLAGCRMHG 386
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 97/242 (40%), Gaps = 35/242 (14%)
Query: 182 MPARSVVSWNSLLKGYVKRGDIDG------AWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
+P R VVSW S + + GD+ G A P N V+ T++S CA + S
Sbjct: 26 LPPRDVVSWTSAIARPAREGDLQGAAAALSAMLSSPAAPPPNDVTLLTVLSACAGDSSSA 85
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
A L + V L L+ C + L + + F + +V+ N
Sbjct: 86 LARPLALSLHALAVKLFPCNLL----LCTCLARFYLASRLPHLAIKLFDSMPDRSVVTYN 141
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------ 343
+ + + G + A VF +M + VSWT++I G K G EA+
Sbjct: 142 TMITGLMRN-GLVAAAREVFDEMPAPDKVSWTALIDGCVKNGRHDEAIDCFHSMLRDGVE 200
Query: 344 ---LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH----YGCMVDLFSRAGLMD 396
+T + +SAC+ G + G + + R+EH ++D+++R G +D
Sbjct: 201 PDYVTLVAAISACAEVGALGLGMWV-----HRFVVDKRLEHNVRVANSLIDMYARCGQVD 255
Query: 397 EA 398
A
Sbjct: 256 FA 257
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 78/177 (44%), Gaps = 5/177 (2%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H ++ + L+ Y G + A +VF + + WN MI G A +
Sbjct: 225 VHRFVVDKRLEHNVRVANSLIDMYARCGQVDFARQVFGRIRKRTVVSWNSMIVGFAANGQ 284
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLAS-GYCSNVFIRT 157
+V ++ M + +PD T++ +L+ C+ GL EG + + + G + +
Sbjct: 285 YADAVEHFEAMRREGFKPDTVTFTGVLTACSHAGLTDEGLRYYDAMRTEHGIAARMEHYG 344
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPAR-SVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
+++L +G +G A + + MP R + V +LL G GD+D A ++ +
Sbjct: 345 CVVDLLGRAG---RLGEAMRVVESMPMRPNEVVLGALLAGCRMHGDVDLAEQLMQHL 398
>gi|357494311|ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518779|gb|AET00403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 542
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 182/524 (34%), Positives = 293/524 (55%), Gaps = 33/524 (6%)
Query: 15 SKALTTRQIFSLLQIRNTTKTLF-QIHSQIIINGFSQKNYILAKLLAFYVT-SGYLINAH 72
SK ++ ++LQ TT F QI+ II G + + L F + SG + A+
Sbjct: 22 SKFISNHPCLTMLQNHCTTINHFHQIYPHIIKTGLTLNPIASTRALTFCASPSGNINYAY 81
Query: 73 KVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCG 132
K+F + NP+ WN +IR +RS TP+ ++ L+ M+ + +P TY + A+ G
Sbjct: 82 KLFVRMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPSVFKAYAQLG 141
Query: 133 LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFD----DMPARSVV 188
G Q+HGRV+ G ++ FI ++ +Y G + AR +FD ++ VV
Sbjct: 142 HAHYGAQLHGRVVKLGLQNDQFICNTIIYMYANGGL---MSEARRVFDGKKLELYDHDVV 198
Query: 189 SWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR 248
+ NS++ GY K G+ID + +FD+M R VSW +MISG +NGK +AL LFN+M+
Sbjct: 199 AINSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEG 258
Query: 249 VGLDQVALVAALSACAEIGDLKLGKWIHSYVEEN-FSVGREPVLVSLNNALIHMYASCGE 307
+ + +V+ L+ACA +G L+ GKW+H Y++ N F + V + A+I MY CG
Sbjct: 259 FEVSEFTMVSLLNACAHLGALQHGKWVHDYIKRNHFELN-----VIVVTAIIDMYCKCGS 313
Query: 308 IEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLS 351
+E A VF RR W S+I G A G+ +EA ++F+GVL+
Sbjct: 314 VENAVEVFETCPRRGLSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLT 373
Query: 352 ACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPND 411
AC H G +++ R +FE M + I+P I+HY C+VD+ +AGL++EA L++ MP+KP+
Sbjct: 374 ACKHLGAINKARDYFELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIKGMPLKPDA 433
Query: 412 AVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQ 471
+ GSLL CR H N ++A + AQ+ V E++P A+GY+ L++NV+AA+ ++++ R
Sbjct: 434 IIWGSLLSSCRKHRNVQIARRAAQR-VYELNPSDASGYV-LMSNVHAASNKFEEAIEQRL 491
Query: 472 KMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGE 515
M + K PG S +++ G +H+F+AG + + IY L +
Sbjct: 492 LMKENLTEKEPGCSSIELYGEVHEFIAGGRLHPKTQEIYHLLND 535
>gi|87240913|gb|ABD32771.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 497
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 181/460 (39%), Positives = 261/460 (56%), Gaps = 20/460 (4%)
Query: 76 EKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARC---G 132
K + T W I H ++ K+ + QM++ E EP+ T LLS CA
Sbjct: 45 HKPNSNQTVSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACAHSPSKT 104
Query: 133 LFREGEQVHGRVLASGYCSN-VFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSW 190
G +H G+ N V + T L+++Y +CG + ARL+FD M R++VSW
Sbjct: 105 SITFGAALHTHAFKHGFAMNDVMVGTALIDMY----AKCGKLDYARLVFDQMGVRNLVSW 160
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG 250
N+++ GY+K GD+D A K+FD++P +NVVSWT +I G + +AL F EM+ A V
Sbjct: 161 NTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVV 220
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEE 310
D V ++A +SACA +G L LG W+H V + VL N+LI MYA CG IE
Sbjct: 221 PDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDNVKVL----NSLIDMYARCGCIEL 276
Query: 311 AYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMN 370
A VF M +RN VSW S+I GFA G A +AL F CSH G +DEG + F +
Sbjct: 277 ARQVFDGMSQRNLVSWNSIIVGFAVNGLADKALSFF-----PCSHAGLIDEGLKIFADIK 331
Query: 371 QNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELA 430
++ PRIEHYGC+VDL+SRAG + EA+ +++ MPM PN+ VLGSLL CR + ELA
Sbjct: 332 RDHRNSPRIEHYGCLVDLYSRAGRLKEAWDVIKKMPMMPNEVVLGSLLAACRTQGDVELA 391
Query: 431 SQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQIN 490
+V K E+ P + Y+ L +N+YAA +W + VR++M + G++K S ++I+
Sbjct: 392 EKV-MKYQVELYPGGDSNYV-LFSNIYAAVGKWDGASKVRREMKERGLQKNLAFSSIEID 449
Query: 491 GVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
+H FV+GD +++ IY L ++ + GY PD S
Sbjct: 450 SGIHKFVSGDKYHEENDYIYSALELLSFELHLYGYVPDFS 489
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 33/281 (11%)
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
Y+ +G + +A K+F+K + W +I G + E E+++ +++M PD T
Sbjct: 167 YMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPDFVTV 226
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFD 180
++S CA G G VH V+ + NV + +L+++Y CG + AR +FD
Sbjct: 227 IAIISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMY----ARCGCIELARQVFD 282
Query: 181 DMPARSVVSWNSLLKGYV---------------KRGDIDGAWKIFDEMP--HRN---VVS 220
M R++VSWNS++ G+ G ID KIF ++ HRN +
Sbjct: 283 GMSQRNLVSWNSIIVGFAVNGLADKALSFFPCSHAGLIDEGLKIFADIKRDHRNSPRIEH 342
Query: 221 WTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVE 280
+ ++ ++ G+ ++A + +M ++V L + L+AC GD++L + + Y
Sbjct: 343 YGCLVDLYSRAGRLKEAWDVIKKMPMMP---NEVVLGSLLAACRTQGDVELAEKVMKYQV 399
Query: 281 ENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR 321
E + G ++ N +YA+ G+ + A V R+M+ R
Sbjct: 400 ELYPGGDSNYVLFSN-----IYAAVGKWDGASKVRREMKER 435
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 173/476 (36%), Positives = 263/476 (55%), Gaps = 52/476 (10%)
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHG 142
+A WN +I + + P ++ +Y Q+ + E D + +L C + + G+++HG
Sbjct: 124 SAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHG 183
Query: 143 RVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSW----NSLLKGY 197
VL G +VF+ LM +Y GEC V ARL+FD M R VVSW +LL Y
Sbjct: 184 FVLKKGLDRDVFVGNALMLMY----GECACVEYARLVFDKMMERDVVSWIPTTTALLDMY 239
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
K G + A ++F+ + + VVSWT MI+GC ++ + + LF M+ + +++ ++
Sbjct: 240 AKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITML 299
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
+ R V LN AL+ MYA CG+I A +F +
Sbjct: 300 --------------------------NKERVEVDCILNTALVDMYAKCGDINAAGRLFIE 333
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEG 362
R+ W ++ITGFA GY +EAL +TF+G+L ACSH G V EG
Sbjct: 334 AISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEG 393
Query: 363 RQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCR 422
++ FE M +G+ P+IEHYGCMVDL RAGL+DEA ++++MP+KPN V G+L+ CR
Sbjct: 394 KKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACR 453
Query: 423 IHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPP 482
+H N +L A +L+ EI+PE GY L++N+YAAA RW D A VR+ M +G++K P
Sbjct: 454 LHKNPQLGELAATQLL-EIEPEN-CGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEP 511
Query: 483 GQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
G S +++NG +H+F+ GD ++ Q I + L E+ + + GY PD S + L I+E
Sbjct: 512 GHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDE 567
>gi|356547111|ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Glycine max]
Length = 521
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 180/472 (38%), Positives = 268/472 (56%), Gaps = 32/472 (6%)
Query: 80 NPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARC---GLFRE 136
N W I + +S K+ + QM + EP+ T+ LLS CA
Sbjct: 53 NDPIVSWTTSIADYCKSGHLVKAASKFVQMREAAIEPNHITFITLLSACAHYPSRSSISF 112
Query: 137 GEQVHGRVLASGY-CSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLL 194
G +H V G ++V + T L+++Y +CG V ARL FD M R++VSWN+++
Sbjct: 113 GTAIHAHVRKLGLDINDVMVGTALIDMY----AKCGRVESARLAFDQMGVRNLVSWNTMI 168
Query: 195 KGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQV 254
GY++ G + A ++FD +P +N +SWT +I G + +AL F EM+ + V D V
Sbjct: 169 DGYMRNGKFEDALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYV 228
Query: 255 ALVAALSACAEIGDLKLGKWIHSYV-EENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
++A ++ACA +G L LG W+H V ++F R V VS N+LI MY+ CG I+ A
Sbjct: 229 TVIAVIAACANLGTLGLGLWVHRLVMTQDF---RNNVKVS--NSLIDMYSRCGCIDLARQ 283
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGF 358
VF +M +R VSW S+I GFA G A EAL +++ G L ACSH G
Sbjct: 284 VFDRMPQRTLVSWNSIIVGFAVNGLADEALSYFNSMQEEGFKPDGVSYTGALMACSHAGL 343
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLL 418
+ EG + FE M + I PRIEHYGC+VDL+SRAG ++EA ++++NMPMKPN+ +LGSLL
Sbjct: 344 IGEGLRIFEHMKRVRRILPRIEHYGCLVDLYSRAGRLEEALNVLKNMPMKPNEVILGSLL 403
Query: 419 LGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
CR N LA V L+ E+D + Y+ L++N+YAA +W VR++M + G+
Sbjct: 404 AACRTQGNIGLAENVMNYLI-ELDSGGDSNYV-LLSNIYAAVGKWDGANKVRRRMKERGI 461
Query: 479 RKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
+K PG S ++I+ +H FV+GD ++++ IY L ++ + GY PD S
Sbjct: 462 QKKPGFSSIEIDSSIHKFVSGDKSHEEKDHIYAALEFLSFELQLCGYIPDFS 513
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 134/298 (44%), Gaps = 47/298 (15%)
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
Y+ +G +A +VF+ + W +I G + + E+++ +++M PD T
Sbjct: 171 YMRNGKFEDALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYVTV 230
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFD 180
+++ CA G G VH V+ + +NV + +L+++Y CG + AR +FD
Sbjct: 231 IAVIAACANLGTLGLGLWVHRLVMTQDFRNNVKVSNSLIDMY----SRCGCIDLARQVFD 286
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV----VSWTTMISGCAQNGKSRQ 236
MP R++VSWNS++ G+ G D A F+ M VS+T + C+ G +
Sbjct: 287 RMPQRTLVSWNSIIVGFAVNGLADEALSYFNSMQEEGFKPDGVSYTGALMACSHAGLIGE 346
Query: 237 ALSLFNEMRRARVGL---------------------------------DQVALVAALSAC 263
L +F M+R R L ++V L + L+AC
Sbjct: 347 GLRIFEHMKRVRRILPRIEHYGCLVDLYSRAGRLEEALNVLKNMPMKPNEVILGSLLAAC 406
Query: 264 AEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR 321
G++ L + + +Y+ E G + V L+N +YA+ G+ + A V R+M+ R
Sbjct: 407 RTQGNIGLAENVMNYLIE-LDSGGDSNYVLLSN----IYAAVGKWDGANKVRRRMKER 459
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 48/102 (47%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H ++ F + L+ Y G + A +VF++ + WN +I G A +
Sbjct: 249 VHRLVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQVFDRMPQRTLVSWNSIIVGFAVNGL 308
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
++++ + M ++ +PD +Y+ L C+ GL EG ++
Sbjct: 309 ADEALSYFNSMQEEGFKPDGVSYTGALMACSHAGLIGEGLRI 350
>gi|334188487|ref|NP_200728.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170817|sp|Q9FIF7.1|PP435_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic; Flags: Precursor
gi|9759241|dbj|BAB09765.1| unnamed protein product [Arabidopsis thaliana]
gi|332009773|gb|AED97156.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 544
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 167/524 (31%), Positives = 293/524 (55%), Gaps = 29/524 (5%)
Query: 10 NPATSSKALTTRQ-IFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYL 68
+P +++ L+ R+ + S+L+ + IH++II Q +++ +L+ T +
Sbjct: 18 DPDSNTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSV 77
Query: 69 INAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVC 128
A+ VF NP+ ++ MI G S V LY +MI PD Y + +L C
Sbjct: 78 DYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC 137
Query: 129 ARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVV 188
+ ++H +VL G+ S+ + +M +Y SG A+ +FD+MP R V
Sbjct: 138 D----LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVN---AKKMFDEMPDRDHV 190
Query: 189 SWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR 248
+ ++ Y + G I A ++F ++ ++ V WT MI G +N + +AL LF EM+
Sbjct: 191 AATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMEN 250
Query: 249 VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEI 308
V ++ V LSAC+++G L+LG+W+HS+VE R + + NALI+MY+ CG+I
Sbjct: 251 VSANEFTAVCVLSACSDLGALELGRWVHSFVENQ----RMELSNFVGNALINMYSRCGDI 306
Query: 309 EEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSAC 353
EA VFR M+ ++ +S+ +MI+G A G + EA+ +T + +L+AC
Sbjct: 307 NEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNAC 366
Query: 354 SHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAV 413
SHGG +D G + F M + + ++P+IEHYGC+VDL R G ++EA+ ++N+P++P+ +
Sbjct: 367 SHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIM 426
Query: 414 LGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKM 473
LG+LL C+IH N EL ++A++L +P+ +G L++N+YA++ +W++ +R+ M
Sbjct: 427 LGTLLSACKIHGNMELGEKIAKRLFESENPD--SGTYVLLSNLYASSGKWKESTEIRESM 484
Query: 474 IKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEIT 517
G+ K PG S ++++ +H+F+ GD + IY+ L E+
Sbjct: 485 RDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELN 528
>gi|10178273|emb|CAC08331.1| putative protein [Arabidopsis thaliana]
Length = 1280
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 182/482 (37%), Positives = 275/482 (57%), Gaps = 33/482 (6%)
Query: 50 QKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQM 109
+NY +LA VTS + A+K K +P WN +IRG + S PEKS+ +Y QM
Sbjct: 791 DRNY----MLAVNVTSD-VDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQM 845
Query: 110 IDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGE 169
+ PD TY FL+ +R + G +H V+ SG ++FI L+++Y G
Sbjct: 846 LRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMY---GSF 902
Query: 170 CGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCA 229
AR LFD+MP +++V+WNS+L Y K GD+ A +FDEM R+VV+W++MI G
Sbjct: 903 RDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYV 962
Query: 230 QNGKSRQALSLFNE-MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGRE 288
+ G+ +AL +F++ MR ++V +V+ + ACA +G L GK +H Y+ +
Sbjct: 963 KRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILD----VHL 1018
Query: 289 PVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNT--VSWTSMITGFAKQGYAQEAL--- 343
P+ V L +LI MYA CG I +A+ VF + + T + W ++I G A G+ +E+L
Sbjct: 1019 PLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLF 1078
Query: 344 ------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSR 391
+TFL +L+ACSHGG V E FF+ + ++ G +P+ EHY CMVD+ SR
Sbjct: 1079 HKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GAEPKSEHYACMVDVLSR 1137
Query: 392 AGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLA 451
AGL+ +A + MP+KP ++LG+LL GC H N ELA V +KL+ E+ P Y+
Sbjct: 1138 AGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLI-ELQPHNDGRYVG 1196
Query: 452 LVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYK 511
L ANVYA K+++ ++R+ M K GV+K G S + ++G H F+A D T+ + IY
Sbjct: 1197 L-ANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYA 1255
Query: 512 TL 513
L
Sbjct: 1256 VL 1257
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 111/237 (46%), Gaps = 8/237 (3%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+H ++ +G +I L+ Y + +A K+F++ + + WN ++ +A+S
Sbjct: 875 SLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKS- 933
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRV--LASGYCSNVFI 155
V + + D+ +E D T+S ++ + G + + ++ ++ + S + V +
Sbjct: 934 ---GDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTM 990
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIF--DEM 213
+ + + G R + D +V+ SL+ Y K G I AW +F +
Sbjct: 991 VSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASV 1050
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLK 270
+ + W +I G A +G R++L LF++MR +++ D++ + L+AC+ G +K
Sbjct: 1051 KETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVK 1107
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 112/254 (44%), Gaps = 45/254 (17%)
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPAR----SVVSWNS 192
G ++ + A+G+C +V L+ + C A +LF++M ++ +V ++NS
Sbjct: 598 GLELFRDICANGHCPDVIAYHVLIKALCKA---CRTMEADILFNEMVSKGLKPTVATYNS 654
Query: 193 LLKGYVKRGDIDGAW----KIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR 248
++ G+ K G+ID +++++ + +V+++T++I G +G+ +A+ +NEM+
Sbjct: 655 MIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKD 714
Query: 249 VGLDQV---ALVAALSACAEIGD--LKLGKWIHSYVEENFSV------------------ 285
+++ AL+ L C G+ + + +E + +V
Sbjct: 715 CYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGF 774
Query: 286 ---------GREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
GR PV V N L S +++ AY K+ W +I GF+
Sbjct: 775 GIFREMVHKGRFPVSVDRNYMLAVNVTS--DVDYAYKFLSKLSDPPNYGWNFVIRGFSNS 832
Query: 337 GYAQEALLTFLGVL 350
++++ ++ +L
Sbjct: 833 RNPEKSISVYIQML 846
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 215 HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQ-VALVAALSACAEIGDLKLGK 273
H + + T ++ GKS +ALS+FNE+ +R LD+ ++ + +S C K +
Sbjct: 211 HFDKFTLTPVLQVYCNTGKSERALSVFNEI-LSRGWLDEHISTILVVSFCKWGQVDKAFE 269
Query: 274 WIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR----NTVSWTSM 329
I E + + + V LIH + I++A+ +F KM+R + + +
Sbjct: 270 LIEMLEERDIRLNYKTYCV-----LIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVL 324
Query: 330 ITGFAKQGYAQEALLTFL-----------GVLSA--CSHGGFVDEGR--QFFECMNQNWG 374
I G K + AL +L G+L CS F +E + E + +
Sbjct: 325 IGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCS---FSEESELSRITEVIIGDID 381
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
K + Y + + F R L+ EA+S +QN+
Sbjct: 382 KKSVMLLYKSLFEGFIRNDLVHEAYSFIQNL 412
>gi|224123726|ref|XP_002330193.1| predicted protein [Populus trichocarpa]
gi|222871649|gb|EEF08780.1| predicted protein [Populus trichocarpa]
Length = 485
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 177/482 (36%), Positives = 276/482 (57%), Gaps = 26/482 (5%)
Query: 21 RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTEN 80
R I LL R T L +IH+ + +G +Q N IL+ ++ + + A+++F++T+N
Sbjct: 10 RNILRLLHGRETRTQLREIHAHFLRHGLNQLNQILSHFVSICGSLNKMAYANRIFKQTQN 69
Query: 81 PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
P+ ++N MI+G++ + E+S L+ M ++ PDEYT + LL C+ G+ + G+ +
Sbjct: 70 PTIILFNAMIKGYSLNGPFEESFRLFSSMKNRGIWPDEYTLAPLLKACSSLGVLQLGKCM 129
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECGV-GCARLLFDDMPARSVVSWNSLLKGYVK 199
H VL G+ IR ++ LY CGV A +FD+M R V+ WN ++ G+ K
Sbjct: 130 HKEVLVVGFEGFSAIRIGVIELY----SSCGVMEDAEKVFDEMYQRDVIVWNLMIHGFCK 185
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
RGD+D +F +M R+VVSW MIS AQ+ + +AL LF++M D+ +V
Sbjct: 186 RGDVDMGLCLFRQMRKRSVVSWNIMISCLAQSRRDSEALGLFHDMLDWGFKPDEATVVTV 245
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
L CA +G + +GKWIHSY + S G V++ NAL+ Y G E A VF +M
Sbjct: 246 LPICARLGSVDVGKWIHSYAK---SSGLYRDFVAVGNALVDFYNKSGMFETARRVFDEMP 302
Query: 320 RRNTVSWTSMITGFAKQGYAQ------EALL---------TFLGVLSACSHGGFVDEGRQ 364
R+N +SW ++I+G A G + E ++ TF+GVLS C+H G + GR+
Sbjct: 303 RKNVISWNTLISGLALNGNGELGVELLEEMMNEGVRPNDATFVGVLSCCAHAGLFERGRE 362
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP-MKPNDAVLGSLLLGCRI 423
M ++ I+P++EHYGCMVDL R+G + EA+ L++ MP PN A+ GSLL CR
Sbjct: 363 LLASMVEHHQIEPKLEHYGCMVDLLGRSGCVREAYDLIRIMPGGAPNAALWGSLLSACRT 422
Query: 424 HNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPG 483
H + ELA ++L+ +++P + Y+ L++N+YA +RW VA VR M + V+K PG
Sbjct: 423 HGDVELAHLAVKELI-DLEPWNSGNYV-LLSNMYAEEERWDKVANVRGMMREKNVKKTPG 480
Query: 484 QS 485
QS
Sbjct: 481 QS 482
>gi|347954498|gb|AEP33749.1| chloroplast biogenesis 19, partial [Crucihimalaya wallichii]
Length = 491
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 169/461 (36%), Positives = 272/461 (59%), Gaps = 34/461 (7%)
Query: 75 FEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLF 134
++ + +T W I R+ ++ + M EP+ T+ LLS CG F
Sbjct: 19 LNQSTSETTVSWTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHITFIALLS---GCGDF 75
Query: 135 REGEQVHGRVLASGYC------SNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVV 188
G + +L C ++V + T ++ +Y G V ARL+FD M + V
Sbjct: 76 PSGSETLSNLLHGYACKLGLDRTHVMVGTAIIGMYSKRGH---VKKARLVFDYMEDINSV 132
Query: 189 SWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR 248
+WN+++ GY++ G +D A K+FD+MP R+++SWT MI+G + G +AL F EM+ +
Sbjct: 133 TWNTMIDGYMRSGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQISG 192
Query: 249 VGLDQVALVAALSACAEIGDLKLGKWIHSYV-EENFSVGREPVLVSLNNALIHMYASCGE 307
V D VA++AAL+AC +G L G W+H YV ++F V ++N+LI +Y CG
Sbjct: 193 VRPDYVAIIAALNACTNLGALSFGLWVHRYVMNQDFKNN-----VRVSNSLIDLYCRCGC 247
Query: 308 IEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALL---------------TFLGVLSA 352
+E A VF KM++R VSW S+I GFA G A E+L+ TF G L+A
Sbjct: 248 VEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTA 307
Query: 353 CSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDA 412
CSH G V+EG ++F+ M +++GI PRIEHYGC+VDL+SRAG +++A ++++MPMKPN+
Sbjct: 308 CSHVGLVEEGLRYFQTMKRDYGISPRIEHYGCLVDLYSRAGRLEDALKVIESMPMKPNEV 367
Query: 413 VLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQK 472
V+GSLL CR H N + ++ K +++++ + + Y+ L +N+YAA +W+ + +R+K
Sbjct: 368 VIGSLLAACRTHGNNTVLAERLMKHLSDLNVKSHSNYVIL-SNMYAADGKWEGASQMRRK 426
Query: 473 MIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTL 513
M +G++K PG S ++I+ H F+AGDS + + ++I + L
Sbjct: 427 MKGLGLKKQPGFSSIEIDDCTHVFMAGDSAHVETAIIREVL 467
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 134/340 (39%), Gaps = 78/340 (22%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKE---- 113
++ Y G++ A VF+ E+ ++ WN MI G+ RS + +V ++ +M +++
Sbjct: 106 IIGMYSKRGHVKKARLVFDYMEDINSVTWNTMIDGYMRSGQVDNAVKMFDKMPERDLISW 165
Query: 114 ---------------------------TEPDEYTYSFLLSVCARCGLFREGEQVHGRVLA 146
PD L+ C G G VH V+
Sbjct: 166 TAMINGFVKKGFHEEALVWFREMQISGVRPDYVAIIAALNACTNLGALSFGLWVHRYVMN 225
Query: 147 SGYCSNVFIRTNLMNLYLMSGGECGVGC---ARLLFDDMPARSVVSWNSLLKGYVKRGDI 203
+ +NV + +L++LY C GC AR +FD M R+VVSWNS++ G+
Sbjct: 226 QDFKNNVRVSNSLIDLY------CRCGCVEFAREVFDKMEKRTVVSWNSVIVGF------ 273
Query: 204 DGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSAC 263
A NG + ++L F +M+ D V AL+AC
Sbjct: 274 -------------------------AANGNAHESLVYFRKMQEEGFKPDAVTFTGALTAC 308
Query: 264 AEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRN 322
+ +G ++ G ++ ++ + + L+ +Y+ G +E+A V M + N
Sbjct: 309 SHVGLVEEGLRYFQTMKRDYGISPR---IEHYGCLVDLYSRAGRLEDALKVIESMPMKPN 365
Query: 323 TVSWTSMITGFAKQG---YAQEALLTFLGVLSACSHGGFV 359
V S++ G E L+ L L+ SH +V
Sbjct: 366 EVVIGSLLAACRTHGNNTVLAERLMKHLSDLNVKSHSNYV 405
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H ++ F + L+ Y G + A +VF+K E + WN +I G A +
Sbjct: 219 VHRYVMNQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGN 278
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+S+ +++M ++ +PD T++ L+ C+ GL EG
Sbjct: 279 AHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEG 317
>gi|347954500|gb|AEP33750.1| chloroplast biogenesis 19, partial [Lepidium sativum]
Length = 494
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 174/461 (37%), Positives = 270/461 (58%), Gaps = 34/461 (7%)
Query: 86 WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVL 145
W I +R + ++ + M EP+ T+ LLS C G F G + +L
Sbjct: 36 WTSRITLLSRDDRLAEAAREFSDMRLAGIEPNHITFISLLSAC---GNFPSGSEALSDLL 92
Query: 146 ASGYC------SNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVK 199
C S+V + T ++ +Y G V ARL+FD M ++ V+WN+++ GY++
Sbjct: 93 HGYACKLGLDRSHVMVGTAILGMYSKRGH---VRKARLVFDYMEDKNSVTWNTMIDGYMR 149
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
G +D A K+FDEMP R+++SWT MI+G + G +AL+ F EM+ + V D VA++AA
Sbjct: 150 NGQVDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIIAA 209
Query: 260 LSACAEIGDLKLGKWIHSYV-EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM 318
L+AC +G L G W H YV ++F R V VS N+LI +Y CG +E A VF M
Sbjct: 210 LAACTNLGALSFGLWAHRYVVSQDF---RNNVRVS--NSLIDLYCRCGCVEFARQVFDTM 264
Query: 319 QRRNTVSWTSMITGFAKQGYAQEALL---------------TFLGVLSACSHGGFVDEGR 363
++R VSW S+I GFA G A E+L+ TF G L+ACSH G V+EG
Sbjct: 265 EKRTVVSWNSVIVGFAANGNANESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGF 324
Query: 364 QFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRI 423
Q+F+ M ++ I PRIEH+GC+VDL+SRAG +++A +V++MPMKPN+ V+GSLL CR
Sbjct: 325 QYFQMMKTDYRISPRIEHFGCLVDLYSRAGRLEDAIKVVESMPMKPNEVVIGSLLAACRN 384
Query: 424 HNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPG 483
H N + ++ K ++++D + + Y+ L +N+YAA +W+ + +R+KM +G++K PG
Sbjct: 385 HGNHTILAERLMKHISDLDVKGHSNYVIL-SNMYAADGKWEGASKMRRKMKGLGLKKQPG 443
Query: 484 QSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEG 524
S ++I+ H F+AGD+ + + + I + L I+ +G
Sbjct: 444 YSSIEIDDYTHVFMAGDNAHVETAYIREVLEVISYDLRLQG 484
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 132/340 (38%), Gaps = 78/340 (22%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKE---- 113
+L Y G++ A VF+ E+ ++ WN MI G+ R+ + +V ++ +M +++
Sbjct: 112 ILGMYSKRGHVRKARLVFDYMEDKNSVTWNTMIDGYMRNGQVDNAVKVFDEMPERDLISW 171
Query: 114 ---------------------------TEPDEYTYSFLLSVCARCGLFREGEQVHGRVLA 146
PD L+ C G G H V++
Sbjct: 172 TAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIIAALAACTNLGALSFGLWAHRYVVS 231
Query: 147 SGYCSNVFIRTNLMNLYLMSGGECGVGC---ARLLFDDMPARSVVSWNSLLKGYVKRGDI 203
+ +NV + +L++LY C GC AR +FD M R+VVSWNS++ G+
Sbjct: 232 QDFRNNVRVSNSLIDLY------CRCGCVEFARQVFDTMEKRTVVSWNSVIVGF------ 279
Query: 204 DGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSAC 263
A NG + ++L F +M+ D V AL+AC
Sbjct: 280 -------------------------AANGNANESLVYFRKMQEEGFKPDAVTFTGALTAC 314
Query: 264 AEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRN 322
+ +G ++ G ++ ++ + + L+ +Y+ G +E+A V M + N
Sbjct: 315 SHVGLVEEGFQYFQMMKTDYRISPR---IEHFGCLVDLYSRAGRLEDAIKVVESMPMKPN 371
Query: 323 TVSWTSMITGFAKQG---YAQEALLTFLGVLSACSHGGFV 359
V S++ G E L+ + L H +V
Sbjct: 372 EVVIGSLLAACRNHGNHTILAERLMKHISDLDVKGHSNYV 411
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 121/277 (43%), Gaps = 51/277 (18%)
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
++ +++ + ++ +VSWT+ I+ +++ + +A F++MR A + + + +
Sbjct: 13 TRKNNVNPKIQKLNQSTSETIVSWTSRITLLSRDDRLAEAAREFSDMRLAGIEPNHITFI 72
Query: 258 AALSACAEI--GDLKLGKWIHSYVEENFSVGREPVLVSLN-------------------- 295
+ LSAC G L +H Y + + R V+V
Sbjct: 73 SLLSACGNFPSGSEALSDLLHGYACK-LGLDRSHVMVGTAILGMYSKRGHVRKARLVFDY 131
Query: 296 ---------NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
N +I Y G+++ A VF +M R+ +SWT+MITGF K+G+ +EAL F
Sbjct: 132 MEDKNSVTWNTMIDGYMRNGQVDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEALAWF 191
Query: 347 ---------------LGVLSACSHGGFVDEGRQFFE-CMNQNWGIKPRIEHYGCMVDLFS 390
+ L+AC++ G + G ++Q++ R+ + ++DL+
Sbjct: 192 REMQISGVNPDYVAIIAALAACTNLGALSFGLWAHRYVVSQDFRNNVRVSN--SLIDLYC 249
Query: 391 RAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNA 427
R G ++ A + M K S+++G + NA
Sbjct: 250 RCGCVEFARQVFDTME-KRTVVSWNSVIVGFAANGNA 285
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
H ++ F + L+ Y G + A +VF+ E + WN +I G A +
Sbjct: 226 HRYVVSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDTMEKRTVVSWNSVIVGFAANGNA 285
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
+S+ +++M ++ +PD T++ L+ C+ GL EG Q
Sbjct: 286 NESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGFQ 325
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 176/487 (36%), Positives = 270/487 (55%), Gaps = 22/487 (4%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
++A YV +G L A + + WN MI G+ +++ ++++M + D
Sbjct: 231 MIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWD 290
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCAR 176
E+TY+ +LS CA G F G+QVH +L + ++ ++ N +CG V AR
Sbjct: 291 EFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEAR 350
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
+F+ MP + +VSWN++L GYV G ID A F+EMP RN+++WT MISG AQNG +
Sbjct: 351 QVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEE 410
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
+L LFN M+ A A+ ACA + L G+ +H+ + +G + L S N
Sbjct: 411 SLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQL---VRLGFDSSL-SAGN 466
Query: 297 ALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------- 343
ALI MYA CG +E A+ +F M ++VSW +MI + G+ +AL
Sbjct: 467 ALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILP 526
Query: 344 --LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
+TFL VLS CSH G V+EG ++F+ M+ +GI P +HY M+DL RAG EA +
Sbjct: 527 DRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDM 586
Query: 402 VQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAK 461
++ MP++P + +LL GCRIH N +L Q A++L E+ P+ Y+ L++N+YA
Sbjct: 587 IETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLF-ELMPQHDGTYV-LLSNMYATVG 644
Query: 462 RWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAM 521
RW DVA VR+ M GV+K PG SW+++ +H F+ D + + +Y L E+ ++
Sbjct: 645 RWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMR 704
Query: 522 QEGYKPD 528
+ GY PD
Sbjct: 705 KLGYIPD 711
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 197/433 (45%), Gaps = 85/433 (19%)
Query: 3 VEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFY 62
+++ P NP + S A T +H+ +I +GF + YIL +L+ Y
Sbjct: 20 LQQCCPHNPMSYSIART-------------------VHAHMIASGFKPRGYILNRLIDVY 60
Query: 63 VTSGYLINAHKVFEKTENPS---------------------------------TAIWNQM 89
S L++AH +F++ P T +N M
Sbjct: 61 CKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAM 120
Query: 90 IRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE----QVHGRVL 145
I G++ + ++ L++ ++ PD +T++ +L A L E E Q+H V+
Sbjct: 121 ITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALA---LIVEDEKQCQQIHCAVV 177
Query: 146 ASGYCSNVFIRTNLMNLYLMSGGECG----------VGCARLLFDDMPARSVVSWNSLLK 195
SG + F+ T+++N L +C + AR LFD+M R +SW +++
Sbjct: 178 KSG---SGFV-TSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIA 233
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVA 255
GYV+ G++D A + D M + VV+W MISG +G +AL +F +M + D+
Sbjct: 234 GYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFT 293
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
+ LSACA G GK +H+Y+ +S+NNAL +Y CG+++EA VF
Sbjct: 294 YTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVF 353
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEA-----------LLTFLGVLSACSHGGFVDEGRQ 364
+M ++ VSW ++++G+ G EA LLT+ ++S + GF +E +
Sbjct: 354 NQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLK 413
Query: 365 FFECMNQNWGIKP 377
F M G +P
Sbjct: 414 LFNRMKSE-GFEP 425
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 9/186 (4%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H+Q++ GF L+ Y G + AH +F + WN MI +
Sbjct: 448 QLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHG 507
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLA-SGYCSNVFIR 156
+++ L++ M+ ++ PD T+ +LS C+ GL EG + + G C
Sbjct: 508 HGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHY 567
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVS-WNSLLKGYVKRGDID----GAWKIFD 211
+++L +G A+ + + MP W +LL G G++D A ++F+
Sbjct: 568 ARMIDLLCRAG---KFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFE 624
Query: 212 EMPHRN 217
MP +
Sbjct: 625 LMPQHD 630
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 182/524 (34%), Positives = 286/524 (54%), Gaps = 57/524 (10%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
+LA YV +G + +A ++FE + WN M+ G+ + + + + D+ E D
Sbjct: 98 MLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVK----RNRLVDARGIFDRMPERD 153
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGG--------- 168
E +++ ++S A+ G E + R+ +VF T +++ Y+ +G
Sbjct: 154 EVSWNTMISGYAQNGELLEAQ----RLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFD 209
Query: 169 ------------------ECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKI 209
+C + AR LF+ MP ++V SWN+++ GY + GDI A
Sbjct: 210 GMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNF 269
Query: 210 FDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDL 269
FD MP R+ +SW +I+G AQ+G +AL LF EM+R L++ + LS CAEI L
Sbjct: 270 FDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAAL 329
Query: 270 KLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSM 329
+LGK +H V G E + NAL+ MY CG I++AY VF ++ + VSW +M
Sbjct: 330 ELGKQVHGRV---VKAGLESGCY-VGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTM 385
Query: 330 ITGFAKQGYAQEALLTF---------------LGVLSACSHGGFVDEGRQFFECMNQNWG 374
I G+A+ G+ +EAL+ F +GVLSACSH G VD+G ++F M Q++G
Sbjct: 386 IAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYG 445
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVA 434
I +HY CM+DL RAG +D+A +L++NMP +P+ A G+LL RIH N EL + A
Sbjct: 446 ITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAA 505
Query: 435 QKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLH 494
K++ E++P+ + Y+ L++N+YAA+ RW DV +R +M GV+K PG SWV++ +H
Sbjct: 506 -KMIFEMEPDNSGMYV-LLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIH 563
Query: 495 DFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
F GDS + + IY L E+ ++ +EGY + +EE
Sbjct: 564 TFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEE 607
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 107/243 (44%), Gaps = 59/243 (24%)
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
ARLLFD MP R VVSWN++L GY + G + A +IFDEMP +N +SW M++ QNG+
Sbjct: 49 ARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRI 108
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
A LF D +L W
Sbjct: 109 EDARRLFESK----------------------ADWELISW-------------------- 126
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEA-----------L 343
N ++ Y + +A G+F +M R+ VSW +MI+G+A+ G EA +
Sbjct: 127 -NCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDV 185
Query: 344 LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQ 403
T+ ++S G +DE R+ F+ M + + + ++ + + MD+A L +
Sbjct: 186 FTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVS-----WNAIIAGYVQCKRMDQARELFE 240
Query: 404 NMP 406
MP
Sbjct: 241 AMP 243
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H +++ G Y+ LL Y G + +A+ VFE E WN MI G+AR
Sbjct: 334 QVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHG 393
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG-EQVHGRVLASGYCSNVFIR 156
++++ L++ M PD+ T +LS C+ GL +G E + G +N
Sbjct: 394 FGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHY 453
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPAR-SVVSWNSLL 194
T +++L +G + A+ L +MP +W +LL
Sbjct: 454 TCMIDLLGRAG---RLDDAQNLMKNMPFEPDAATWGALL 489
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 194/559 (34%), Positives = 293/559 (52%), Gaps = 34/559 (6%)
Query: 1 MLVEEIIPANPAT----SSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILA 56
M ++P+ +T ALT + +LL + +IH+ + Q +
Sbjct: 1 MSTAAVLPSPASTRHPAGGGALTADRAAALLAGCASASRAAEIHAAAVRASVDQDKAVAF 60
Query: 57 KLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETE- 115
+L Y SG L A + +T +P+ + I H+ ++ L +M+
Sbjct: 61 RLQRAYAASGRLDLAVALLRRTPDPTAVFYTSAIHAHSSRGLHRAALALLSEMLLSRHGL 120
Query: 116 -PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGC 174
P +T S L C G G +HG + ++ T L+ +Y +G
Sbjct: 121 LPTAHTLSASLPAC---GCLAVGRALHGYAVKLALSGEPYVATALLGMYARAGEAA---A 174
Query: 175 ARLLFDDM-PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGK 233
AR LFD M P VVS ++L Y K G +D A +FD +P +++V W M+ G Q+G+
Sbjct: 175 ARALFDGMRPDPHVVSVTAMLSCYAKMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGR 234
Query: 234 SRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVS 293
+AL LF +M R+ V D+V++V ALSA A++G + G+W+HS+V R +
Sbjct: 235 PSEALRLFRQMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVANGGRRARVRLNAR 294
Query: 294 LNNALIHMYASCGEIEEAYGVFRKMQ---RRNTVSWTSMITGFAKQGYAQEAL------- 343
+ AL+ MY CG +EEA VFR + R+ V+W +MI G+A G ++EAL
Sbjct: 295 VGTALVDMYYKCGSLEEAVAVFRDLGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLR 354
Query: 344 --------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLM 395
+TF+GVL+ACSH G VDEGR F M + +GI P++EHYGCMVDL RAG +
Sbjct: 355 AQGLWPTDITFIGVLNACSHSGLVDEGRALFAAMEEEYGIVPKVEHYGCMVDLLGRAGRV 414
Query: 396 DEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVAN 455
+EAF LVQ+M KP+ A+ SLL CR+H N L +VA LV + +G L++N
Sbjct: 415 EEAFDLVQSMKAKPDAAMWASLLGACRLHKNLALGQRVADYLVG--NGLANSGTYVLLSN 472
Query: 456 VYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGE 515
+YAAA +W++V VR M GV+K PG S V++ + +FVAGD ++ +++ IY L E
Sbjct: 473 MYAAAGKWREVGRVRSMMRASGVQKEPGCSAVEVGRRVVEFVAGDRSHPRSAEIYAKLEE 532
Query: 516 ITMQAMQEGYKPDISELFL 534
+ A G+ P +EL L
Sbjct: 533 VNSIARARGHVPH-TELVL 550
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 186/541 (34%), Positives = 291/541 (53%), Gaps = 64/541 (11%)
Query: 18 LTTRQIFSLLQIRNTT-KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFE 76
LT + + LL+ ++ K L +IH+ ++ GFS+KN +L +LL V G + A +VF+
Sbjct: 8 LTKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFD 67
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
+ P +WN + +G+ R++ P +S+ LYK+M D PDE+TY F++ ++ G F
Sbjct: 68 EMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSC 127
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKG 196
G +H V+ G+ + T L+ +Y M GE + A LF+ M + +V+WN+ L
Sbjct: 128 GFALHAHVVKYGFGCLGIVATELVMMY-MKFGE--LSSAEFLFESMQVKDLVAWNAFL-- 182
Query: 197 YVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVAL 256
+ C Q G S AL FN+M V D +
Sbjct: 183 -----------------------------AVCVQTGNSAIALEYFNKMCADAVQFDSFTV 213
Query: 257 VAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL---VSLNNALIHMYASCGEIEEAYG 313
V+ LSAC ++G L++G EE + R+ + + + NA + M+ CG E A
Sbjct: 214 VSMLSACGQLGSLEIG-------EEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARV 266
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGF 358
+F +M++RN VSW++MI G+A G ++EAL +TFLGVLSACSH G
Sbjct: 267 LFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGL 326
Query: 359 VDEGRQFFECMNQ--NWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGS 416
V+EG+++F M Q + ++PR EHY CMVDL R+GL++EA+ ++ MP++P+ + G+
Sbjct: 327 VNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGA 386
Query: 417 LLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKM 476
LL C +H + L +VA LV E P+ Y L++N+YAAA +W V VR KM K+
Sbjct: 387 LLGACAVHRDMILGQKVADVLV-ETAPD-IGSYHVLLSNIYAAAGKWDCVDKVRSKMRKL 444
Query: 477 GVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGI 536
G +K S V+ G +H F GD ++ Q+ IY+ L EI + + GY PD +F +
Sbjct: 445 GTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDV 504
Query: 537 E 537
E
Sbjct: 505 E 505
>gi|223946989|gb|ACN27578.1| unknown [Zea mays]
gi|414586292|tpg|DAA36863.1| TPA: hypothetical protein ZEAMMB73_743648 [Zea mays]
Length = 545
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 175/501 (34%), Positives = 280/501 (55%), Gaps = 33/501 (6%)
Query: 23 IFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPS 82
I + L+ T + L + H + SQ +Y+ +++ G +A +VF + P+
Sbjct: 13 IIARLRTCATFRDLLRAHGLAVRLCLSQSSYVATQIVHICNAHGRAAHAARVFAQIPAPN 72
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEP--------DEYTYSFLLSVCARCGLF 134
+ N MI+ +A++ +V +Y +M+ P D +TY FLL C
Sbjct: 73 LHLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPHPSTAGFSVGDRFTYPFLLKACGALAAS 132
Query: 135 REGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLL 194
R G QVH V SG S+ ++ +L+ +Y G + AR FD M + VVSWN+L+
Sbjct: 133 RLGRQVHAHVARSGCESHAVVQNSLIEMYTRCGD---LSTARKAFDGMREKDVVSWNTLI 189
Query: 195 KGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQV 254
+ + G + A ++F MP + VVSWT ++SG G A+ +F M+ D V
Sbjct: 190 SAHARMGQMRRARELFYSMPDKTVVSWTALVSGYTAVGDFTGAVEVFRLMQMEGFEPDDV 249
Query: 255 ALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGV 314
++VA L ACA++G L+LG+WI++Y ++ +G+ V + NAL+ MYA CG IEEA +
Sbjct: 250 SIVAVLPACAQLGALELGRWIYAYCSKHGMLGK----VYICNALMEMYAKCGCIEEALQL 305
Query: 315 FRKMQRRNTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGF 358
F M ++ +SW++ I G A G A+EA+ +TF+G+LSACSH G
Sbjct: 306 FHGMSEKDVISWSTAIGGLAAHGRAREAVRLFEVMDREGRVMPNGITFVGLLSACSHAGL 365
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLL 418
VDEG ++ + M +++G++P +EHYGC+VDL R+G + A ++ MP+ P+ + GSLL
Sbjct: 366 VDEGLRYLDQMKEDYGVEPGVEHYGCVVDLLGRSGRIQRALDTIRGMPVPPDGKIWGSLL 425
Query: 419 LGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
CR H + E A A++LV E++P G L ++ANVY AA RW +VA+ R+++
Sbjct: 426 SACRSHGDVETAVVAAERLV-ELEPGD-VGNLVMLANVYGAAGRWGEVASTRKEIRSRST 483
Query: 479 RKPPGQSWVQINGVLHDFVAG 499
RK PG S ++++ V+ +FVAG
Sbjct: 484 RKTPGCSMIEVDNVVREFVAG 504
>gi|359491803|ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 550
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 181/507 (35%), Positives = 272/507 (53%), Gaps = 57/507 (11%)
Query: 27 LQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA---FYVTSGYLINAHKVFEKTENPST 83
L T L Q H+ +I++G + + + +LLA ++ L +A +F T NPS
Sbjct: 18 LTALTATSHLHQAHAHLIVSGLASHPFTVTRLLACAALSPSASDLPHAKTIFLHTHNPSP 77
Query: 84 AIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGR 143
++N +I +R+ SV Y M+ PD +T+ FL+ + G Q+H
Sbjct: 78 FMFNTIIMASSRTL---DSVTFYVCMLHAGHFPDNFTFPFLIKSSSASPTSLLGHQLHAH 134
Query: 144 VLASGYCSNVFIRTNLMNLY---------------------------LMSG--GECGVGC 174
V+ G +VF+ N++ LY L++G +
Sbjct: 135 VVKFGLDRDVFVVNNMIALYSSFRELRSARKVFDESYSLVDVVSWTTLITGFSNSGQIDE 194
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
AR +FD MP ++ VSWN+++ GY I+ A K+FDEMP R+ SW+ M+SG +Q G
Sbjct: 195 ARKIFDLMPLKNTVSWNAMISGYAGSSRINEARKLFDEMPDRDAASWSAMVSGYSQLGMC 254
Query: 235 RQALSLFNEMRRA-RVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVS 293
+AL LF EM ++ ++ ALV+A+SACA++ L+ G+W+HSY++E + + V+
Sbjct: 255 NEALDLFMEMVTGDKMIPNEAALVSAVSACAQLRALEEGRWLHSYIKEK----KLRINVT 310
Query: 294 LNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------- 343
L L+ MY CG I +A GVF M RN SW SMI G A G +EAL
Sbjct: 311 LGTVLLDMYGKCGSILDAAGVFNLMSERNVNSWNSMIAGLALNGCGKEALALFWKMQFVG 370
Query: 344 -----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEA 398
+TF+ +L+ CSH G + EGR F M Q +GIKP+++HYGCMVDL RAGL+ EA
Sbjct: 371 PSPNAITFIALLTGCSHSGLITEGRWLFSMMTQVYGIKPQLKHYGCMVDLLGRAGLVKEA 430
Query: 399 FSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYA 458
V+ MPMKP+ + G+L+ CRIH EL ++ ++L+ +++P Y AL+ N++A
Sbjct: 431 LDFVEKMPMKPHSELWGALVGACRIHGQVELGEELGKRLI-DLEPHHGGRY-ALLCNIFA 488
Query: 459 AAKRWQDVAAVRQKMIKMGVRKPPGQS 485
AA+RW DVA VR V K PG +
Sbjct: 489 AAQRWDDVAMVRDLEKGRKVLKNPGNN 515
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 189/579 (32%), Positives = 299/579 (51%), Gaps = 89/579 (15%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTS-----GYLINAHKVFEKTENPSTAIWNQMIRG 92
Q+H+ + ++ ++LLA Y GY A +F++ + S WN +I+
Sbjct: 31 QLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGY---ARSIFDRIQRRSLIHWNTIIKC 87
Query: 93 HARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCS- 151
+ ++ + L+ +++ E PD +T ++ CAR G+ +EG+Q+HG L G+ S
Sbjct: 88 YVENQFSHDGIVLFHELV-HEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSD 146
Query: 152 ------------------------------NVFIRTNLMNLYLMSG-------------- 167
+V + +L++ Y G
Sbjct: 147 VFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPE 206
Query: 168 -------------GECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
+CG V AR LFD MP R++VSWN+++ GY+K GD D A ++F +M
Sbjct: 207 RDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELFYQM 266
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK 273
P ++V+W MI+G NG+ A+ +F M + LV+ LSA + + L G+
Sbjct: 267 PIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGR 326
Query: 274 WIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF 333
WIHSY+E+N G E + L +LI MYA CG IE A VFR +Q++ WT++I G
Sbjct: 327 WIHSYMEKN---GFELDGI-LGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGL 382
Query: 334 AKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
G A AL + F+GVL+AC+H G VD+GRQ+F+ M + I+P
Sbjct: 383 GIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPT 442
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
+EHYGC+VD+ RAG ++EA + ++NMP+ PN + SLL G R H ++ AQ+++
Sbjct: 443 LEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVI 502
Query: 439 AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVA 498
E+ PE Y+ L++N+YAA+ W+ V+ VR+ M K G RK PG S V+ G LH+F+
Sbjct: 503 -EVAPETIGCYI-LLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIV 560
Query: 499 GDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIE 537
GD ++ Q IY + E+ + G+ PD +++ L IE
Sbjct: 561 GDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIE 599
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 43/279 (15%)
Query: 135 REGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLL 194
+E EQ+H L + ++ F+ + L+ LY +G AR +FD + RS++ WN+++
Sbjct: 27 QEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKIN-DLGYARSIFDRIQRRSLIHWNTII 85
Query: 195 KGYVKRGDIDGAWKIFDEMPHRNVVSWTTM---ISGCAQNGKSRQALSLFNEMRRARVGL 251
K YV+ +F E+ H + T+ I GCA+ G ++ + + G
Sbjct: 86 KCYVENQFSHDGIVLFHELVHEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGS 145
Query: 252 D---QVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEI 308
D Q +LV S C EI + K ++++ V L N+LI YA CGEI
Sbjct: 146 DVFVQGSLVNMYSKCGEIDCAR--KVFDGMIDKD---------VVLWNSLIDGYARCGEI 194
Query: 309 EEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFEC 368
+ A +F +M R+ SWT ++ G +K G + A R+ F+
Sbjct: 195 DIALQLFEEMPERDAFSWTVLVDGLSKCGKVESA--------------------RKLFDQ 234
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM 407
M + + M++ + ++G D A L MP+
Sbjct: 235 MPCR-----NLVSWNAMINGYMKSGDFDSALELFYQMPI 268
>gi|449470352|ref|XP_004152881.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Cucumis sativus]
Length = 579
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 185/529 (34%), Positives = 284/529 (53%), Gaps = 61/529 (11%)
Query: 21 RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV--TSGYLINAHKVFEKT 78
+ I +LLQ N+ K L +IH+ +I++G I KLL F SG L A +F +
Sbjct: 5 KAILALLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQLLFHQM 64
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMI-DKETEPDEYTYSFLLSVCARCGLFREG 137
E P T WN +IRG A+S +P ++ Y QM+ D + PD +T+SF+L C R R+
Sbjct: 65 ECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERIKAERKC 124
Query: 138 EQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGY 197
++VHG V+ GY ++V + TNL+ Y G C AR +FD MPAR +V+WN+++ +
Sbjct: 125 KEVHGSVIRCGYDADVIVCTNLVKCYSAMGSVC---IARQVFDKMPARDLVAWNAMISCF 181
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
+Q G ++AL +N+MR V +D LV
Sbjct: 182 -------------------------------SQQGLHQEALQTYNQMRSENVDIDGFTLV 210
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
+S+CA +G L +G +H + EN G + L + NALI MYA CG +++A +F +
Sbjct: 211 GLISSCAHLGALNIGVQMHRFAREN---GLDQSLY-VGNALIDMYAKCGSLDQAILIFDR 266
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEG 362
MQR++ +W SMI G+ G EA+ +TFLG+L CSH G V EG
Sbjct: 267 MQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARIQPNPVTFLGLLCGCSHQGLVQEG 326
Query: 363 RQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG-C 421
++F M+ + +KP ++HYGC+VDL+ RAG +D+A +V N ND+VL +LLG C
Sbjct: 327 VKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKALEIVSNSS--HNDSVLWRILLGSC 384
Query: 422 RIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKP 481
+IH N + ++A ++E+ +AG L+A +YA K VA +R+ + G +
Sbjct: 385 KIHKNVTIG-EIAMNRLSELGA-TSAGDCILLATIYAGEKDKAGVARMRKMIKSQGKKTT 442
Query: 482 PGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
PG SW++I +H FV D +++ + +Y+ L E+ QA GY D S
Sbjct: 443 PGWSWIEIGEQVHKFVVDDKSHRYSVEVYEKLREVIHQASFFGYVGDES 491
>gi|225424875|ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Vitis vinifera]
Length = 607
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 188/546 (34%), Positives = 287/546 (52%), Gaps = 58/546 (10%)
Query: 7 IPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQ--KNYILAKLLAFYVT 64
+P + S R++ L L Q+H+Q I S + L + + +
Sbjct: 13 LPHAISNSDSFTHHRRLLLFLNSCTCISQLKQLHAQTIRTTSSHHPNTFFLYSRILHFSS 72
Query: 65 SGYLINAHKVFEKTENPSTAIWNQMIRGHARS-ETPEKSVYLYKQMIDK-ETEPDEYTYS 122
L A +VF + ENP++ +WN +IR ARS + + ++ LY +M+++ D++T+
Sbjct: 73 LHDLRYAFRVFHQIENPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFP 132
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDM 182
F+L CA EGEQ+H ++L G+ S+V+I +L++ Y C RL
Sbjct: 133 FVLKACAYLFALSEGEQIHAQILKLGFDSDVYINNSLVHFY--------ATCDRL----- 179
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
D A +FD M R++VSW +I + G+ AL+LF
Sbjct: 180 ---------------------DFAKGVFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFG 218
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMY 302
EM++ D + + +ACA +G L LG W H ++ + F R ++ LN +L+ MY
Sbjct: 219 EMQKF-FEPDGYTIQSIANACAGMGSLSLGMWAHVFLLKKFDADRVNDVL-LNTSLVDMY 276
Query: 303 ASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------------LTF 346
CG +E A +F +M +R+ SW SMI GF+ G AL +TF
Sbjct: 277 CKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCMVRTEKLMPNAITF 336
Query: 347 LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP 406
+GVLSAC+HGG V EGR++F+ M + IKP +EHYGC+VDL +RAGL+DEA +V NMP
Sbjct: 337 VGVLSACNHGGLVSEGRRYFDVMVTEYKIKPELEHYGCLVDLLARAGLIDEALDVVSNMP 396
Query: 407 MKPNDAVLGSLLLGCRIHN-NAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQD 465
M+P+ + SLL C N EL+ ++A++ V E + +G L++ VYA+A RW D
Sbjct: 397 MRPDLVIWRSLLDACCKQNAGVELSEEMARR-VLEAEGGVCSGVYVLLSRVYASASRWND 455
Query: 466 VAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGY 525
V VR+ M GV K PG S ++I+GV H+F AGD+++ Q IY L I + + GY
Sbjct: 456 VGMVRKLMTDKGVVKEPGCSSIEIDGVAHEFFAGDTSHPQTEEIYSALDVIEERVERVGY 515
Query: 526 KPDISE 531
PD S+
Sbjct: 516 SPDSSQ 521
>gi|242050128|ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
gi|241926185|gb|EER99329.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
Length = 638
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 174/497 (35%), Positives = 282/497 (56%), Gaps = 26/497 (5%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
+H + G + ++ LL Y ++G L ++ + F++ + + WN MI G+A++
Sbjct: 132 LAVHGVALRLGLVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMIGGYAQA 191
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
+ L+ +M + DE+T LL C++ G G VH R+L SG ++ +
Sbjct: 192 GDTREVCSLFGEMRRQGFLEDEFTLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVDLILE 251
Query: 157 TNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
+ L+++Y G+CG + AR F+ MP +SVVSW S+L K G ++ A FD MP
Sbjct: 252 SALVDMY----GKCGDLWMARRCFEMMPIKSVVSWTSMLCAQTKHGSVNAARCWFDHMPE 307
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
RN+VSW MIS Q G+ +AL L+N+M+ + D++ LVA LSA IGDL +GK +
Sbjct: 308 RNIVSWNAMISCYVQRGQCHEALDLYNQMQSQGLAPDEITLVAVLSASGRIGDLTVGKMV 367
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
H Y+ +N P VSL N+L+ MYA CG+++ A +F +M RN VSW +I G A
Sbjct: 368 HLYIRDNIY---NPD-VSLVNSLLDMYAKCGQVDTAISLFSEMCNRNVVSWNVIIGGLAM 423
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
G A + + +TF+ +LSACSHGG ++ G+ +FE M + +K +E
Sbjct: 424 HGRALDTITFFRSMVTDSFAPDGITFVALLSACSHGGLLETGQHYFESMRHVYNVKHEVE 483
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HY CMVDL R G +++A L++ MPMKP+ V G+LL CRIH N ++ QV ++L+ E
Sbjct: 484 HYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHGNVKIGRQVIKQLL-E 542
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
++ + G L++N+ +W+D+ +R+ M + G RK G S ++IN +H+F D
Sbjct: 543 LEG-ISGGLFVLISNLLYETHQWEDMKRLRKLMKEWGTRKDMGVSSIEINNSIHEFGVED 601
Query: 501 STYKQASLIYKTLGEIT 517
++++S IY + +++
Sbjct: 602 IRHERSSEIYAVVDQLS 618
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 191/445 (42%), Gaps = 90/445 (20%)
Query: 10 NPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGF--SQKNYILAKLLAF-YVTSG 66
PA + L + Q LL+ + + L Q+H+ ++++G + + +LA A G
Sbjct: 3 TPARAGHHLPSLQ--KLLRQCRSIQRLNQLHAHLLVHGSLSAASDLLLASYCALAKAGHG 60
Query: 67 YLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLS 126
L +A ++F+ P ++N +IR + S P +++ L++ M+ + P+E+T F++
Sbjct: 61 VLCHARRLFDGIPGPDRVMYNTIIRAYCNSSCPREALRLHRGMLRRGILPNEFTLPFVVK 120
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARS 186
C VHG L G VF+ L++ Y +G +G +R FD+M R+
Sbjct: 121 ACTIAQAREHALAVHGVALRLGLVGQVFVGNALLHSYASAG---SLGDSRRFFDEMVDRN 177
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
VVSWNS++ GY + GD +R+ SLF EMRR
Sbjct: 178 VVSWNSMIGGYAQAGD-------------------------------TREVCSLFGEMRR 206
Query: 247 ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCG 306
D+ LV+ L AC++ G+L++G+ +H V V + L +AL+ MY CG
Sbjct: 207 QGFLEDEFTLVSLLIACSQEGNLEIGRLVHC----RMLVSGSRVDLILESALVDMYGKCG 262
Query: 307 E-------------------------------IEEAYGVFRKMQRRNTVSWTSMITGFAK 335
+ + A F M RN VSW +MI+ + +
Sbjct: 263 DLWMARRCFEMMPIKSVVSWTSMLCAQTKHGSVNAARCWFDHMPERNIVSWNAMISCYVQ 322
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
+G EAL +T + VLSA G + G+ + N P +
Sbjct: 323 RGQCHEALDLYNQMQSQGLAPDEITLVAVLSASGRIGDLTVGKMVHLYIRDNI-YNPDVS 381
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNM 405
++D++++ G +D A SL M
Sbjct: 382 LVNSLLDMYAKCGQVDTAISLFSEM 406
>gi|225433758|ref|XP_002267783.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 636
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 192/541 (35%), Positives = 288/541 (53%), Gaps = 78/541 (14%)
Query: 16 KALTTR--QIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINA 71
K LT R + S LQ ++ K + Q I +G ++++K+++F S G L+ A
Sbjct: 106 KMLTIRVPDLLSKLQQLSSVKEVEQTQCLITKSGLFNHPFVISKIISFLSLSPLGSLVYA 165
Query: 72 HKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARC 131
+FE T + + N MIR +A+S P K++YLY M K+ + D +TY F L CAR
Sbjct: 166 QAIFEDTAMDNPFVCNTMIRAYAKSVFPIKAIYLYNFMHRKDIKSDHFTYPFGLKACARV 225
Query: 132 GLFREGE-------------QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARL 177
EG+ ++H R+ G + FI+ +L+ LY +CG + AR
Sbjct: 226 LWCNEGDIKCTQLDIACKGAEIHCRLFRLGLDQDCFIQNSLVYLY----SQCGFLDLARC 281
Query: 178 LFDDM-------------------------------PARSVVSWNSLLKGYVKRGDIDGA 206
+FD+M P ++VVSWN L+ Y++ G I+ A
Sbjct: 282 VFDEMTEKTITSWNVMISAYDQINDFDSADSLIGSMPGKNVVSWNMLIARYIRLGKIEDA 341
Query: 207 WKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEI 266
+F EMP R+ VSW +MI+G Q +AL+LF EM A V + L++ L ACAE
Sbjct: 342 KVVFQEMPERDAVSWNSMIAGYVQIKDYARALALFREMEIANVEATDITLISVLGACAET 401
Query: 267 GDLKLGKWIHSYVEENFSVGRE-PVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVS 325
G L++G+ IH +++ RE + L+NAL+ MYA CG + A+ VF +++ ++
Sbjct: 402 GALEIGRKIHLSLKQ-----REYKIEGYLSNALVDMYAKCGHLNLAWEVFSELKMKHISC 456
Query: 326 WTSMITGFAKQGYAQEAL-----------------LTFLGVLSACSHGGFVDEGRQFFEC 368
W +MI A GY +EAL +TF+GVL ACSH G VDEGR FF
Sbjct: 457 WNAMIVSLAVHGYCEEALRLFSTMEMSVDGARPNRVTFIGVLIACSHKGLVDEGRTFFNR 516
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAE 428
M + I P I+HYGCMVDL SR GL+ EA +++ MP + N + +LL CR+H++ +
Sbjct: 517 MVNEYKIMPDIKHYGCMVDLLSRCGLLKEAHHMIKTMPFEANSVLWRTLLGACRVHHHVD 576
Query: 429 LASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
LA + Q+L +++P + Y+ L++N+YA A+RW DV VR +MI GV K PG S +
Sbjct: 577 LAEESFQQL-GKMEPLRDGDYV-LLSNIYAEAQRWNDVERVRSEMIGSGVPKKPGSSHIG 634
Query: 489 I 489
I
Sbjct: 635 I 635
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 175/494 (35%), Positives = 278/494 (56%), Gaps = 40/494 (8%)
Query: 70 NAHKVFEKTENPSTAI-WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVC 128
N +F K + + WN +I ARS +++ + M +P+ T+ + C
Sbjct: 27 NLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSC 86
Query: 129 ARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSV 187
+ G Q H + L G+ ++F+ + L+++Y +CG + AR LFD++ R++
Sbjct: 87 SALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMY----SKCGELRDARTLFDEISHRNI 142
Query: 188 VSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM-RR 246
VSW S++ GYV+ D A ++FD M R+V+SW ++I+ AQNG S +++ +F+ M +
Sbjct: 143 VSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKD 202
Query: 247 ARVGLDQVALVAALSACAEIGDLKLGKWIHSYV-----EENFSVGREPVLVSLNNALIHM 301
+ + V L A L ACA G +LGK IH V E N VG ++I M
Sbjct: 203 GEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVG---------TSIIDM 253
Query: 302 YASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTF 346
Y CG++E A F +M+ +N SW++M+ G+ G+A+EAL +TF
Sbjct: 254 YCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITF 313
Query: 347 LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP 406
+ VL+ACSH G ++EG +F+ M+ + ++P +EHYGCMVDL RAG + EAF L++ M
Sbjct: 314 VSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMK 373
Query: 407 MKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDV 466
++P+ V G+LL CR+H N +L A+KL E+DP+ GY L++N+YA A RW+DV
Sbjct: 374 LRPDFVVWGALLGACRMHKNVDLGEISARKLF-ELDPKN-CGYYVLLSNIYADAGRWEDV 431
Query: 467 AAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYK 526
+R M G+ KPPG S V I G +H F+ GD + Q IY+ L +++M+ + GY
Sbjct: 432 ERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYV 491
Query: 527 PDISELF--LGIEE 538
PD++ + +G EE
Sbjct: 492 PDMTSVLHDVGHEE 505
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 142/328 (43%), Gaps = 74/328 (22%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q H Q +I GF ++ + L+ Y G L +A +F++ + + W MI G+ +++
Sbjct: 97 QAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQND 156
Query: 98 TPEKSVYLYKQMI--------------------------------DKETEPDEYTYSFLL 125
+++ ++ M D E + T S +L
Sbjct: 157 DAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVL 216
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPA 184
CA G R G+ +H +V+ G SNVF+ T+++++Y +CG V AR FD M
Sbjct: 217 LACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYC----KCGKVEMARKAFDRMRE 272
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
++V SW++++ GY +G +++AL +F EM
Sbjct: 273 KNVKSWSAMVAGY-------------------------------GMHGHAKEALEVFYEM 301
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLG-KWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
A V + + V+ L+AC+ G L+ G W + E F V EP V ++ +
Sbjct: 302 NMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHE-FDV--EPG-VEHYGCMVDLLG 357
Query: 304 SCGEIEEAYGVFRKMQ-RRNTVSWTSMI 330
G ++EA+ + + M+ R + V W +++
Sbjct: 358 RAGYLKEAFDLIKGMKLRPDFVVWGALL 385
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 163/482 (33%), Positives = 282/482 (58%), Gaps = 26/482 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H+ ++ GF+ ++ LL FYV G + +VF++ P +W +IR +
Sbjct: 112 EVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVT 171
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
PEK++ L++ M + PD S ++S C G + +H + SG + F+ +
Sbjct: 172 FPEKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSS 231
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L++ Y GECG + A F + P +++V WN+++ V+ +++ ++F MP R
Sbjct: 232 TLISTY----GECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDR 287
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
+VVSW +MI G A+ G+ ++AL+ F+EM + V + + L++ LSACA G L G WIH
Sbjct: 288 DVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIH 347
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+YV++N + R+ SL+++LI MY+ CG+I++A +F + RR+ +WTS++ G A
Sbjct: 348 AYVDKN-DMNRDG---SLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMH 403
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G ++AL +T +GVLSAC+H G +D+G +F+ M + +G+ P++EH
Sbjct: 404 GRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEH 463
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YGCMVDL R G + EA+ L+ MPM+ N+ + G+ L CR+HNN EL A++L+ +
Sbjct: 464 YGCMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLG-L 522
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
DP + L +N+YA +W +R+++ K G++K PG S +++NG +H F+ GD+
Sbjct: 523 DPRDPWARVML-SNMYAEEAKWDRSMGLRKEIKKKGLKKSPGCSSIEVNGSVHGFLVGDN 581
Query: 502 TY 503
++
Sbjct: 582 SH 583
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 182/441 (41%), Gaps = 100/441 (22%)
Query: 78 TENPSTA---------IWNQMIRGHARSE--TPEKSVYLYKQMIDKETEPDEYTYSFLLS 126
E+PS A +WN MIR + T + + Y Q + P+ +T+ +LL
Sbjct: 40 VEDPSAASRLDCANVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLK 99
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPAR 185
+EGE+VH V+ +G+ + F+ L+ Y+ CG VG R +FD+M
Sbjct: 100 ALVSGQEVKEGEEVHASVVRTGFACSEFVSGALLGFYV----ACGLVGKGRQVFDEMRQP 155
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
+V W +++ YV F E +AL LF MR
Sbjct: 156 GLVLWTLIIRAYVC--------VTFPE-----------------------KALELFRTMR 184
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC 305
+ D VA+ +SAC +GDL + K +H ++E++ G E V +++ LI Y C
Sbjct: 185 EVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKS---GIE-VDAFVSSTLISTYGEC 240
Query: 306 GEIEEAY-------------------------------GVFRKMQRRNTVSWTSMITGFA 334
G ++ AY +F+ M R+ VSW SMI GFA
Sbjct: 241 GSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFA 300
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
+ G QEAL LT L LSAC+ G +D G +++N +
Sbjct: 301 RIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKN-DMNRDG 359
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV- 438
++D++S+ G +D+A + + + + S++ G +H E A K+
Sbjct: 360 SLDSSLIDMYSKCGDIDKAVQIFEE-STRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKE 418
Query: 439 AEIDPEQAAGYLALVANVYAA 459
A++ P+ L A +A
Sbjct: 419 AQVQPDDVTMVGVLSACAHAG 439
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%)
Query: 12 ATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINA 71
S ALT S T IH+ + N ++ + + L+ Y G + A
Sbjct: 319 GVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKA 378
Query: 72 HKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARC 131
++FE++ W ++ G A EK+++ + +M + + +PD+ T +LS CA
Sbjct: 379 VQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHA 438
Query: 132 GLFREG 137
GL +G
Sbjct: 439 GLLDQG 444
>gi|224134663|ref|XP_002327460.1| predicted protein [Populus trichocarpa]
gi|222836014|gb|EEE74435.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 176/505 (34%), Positives = 286/505 (56%), Gaps = 32/505 (6%)
Query: 20 TRQIFSLLQIRN-TTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS---GYLINAHKVF 75
+++ SLL + T L QI S + + + Y AK+++ + S L A ++F
Sbjct: 10 SKKTISLLDQKGLTISQLKQIQSHLTVTATLKDPYAAAKIISLHAHSNARSSLFYAERLF 69
Query: 76 EKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFR 135
+N ST IWN M++ ++ LYK M++ P+ +T+SF++ C +
Sbjct: 70 LCLQNKSTFIWNTMMQAFVEKNEAVRAFSLYKHMLESNYLPNNFTFSFVIRACIDVFNLQ 129
Query: 136 EGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLL 194
G HG+V+ G+ S F++ L++LY CG + AR +FD R VV+W L+
Sbjct: 130 MGLCFHGQVVKFGWESYDFVQNGLIHLY----ANCGFMDLARNMFDMSIKRDVVTWTCLI 185
Query: 195 KGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQV 254
GY+ G + A ++FD MP +N VSW +I+G + G ++AL +F +M+ + L++
Sbjct: 186 SGYLNSGQVLIARELFDRMPEKNPVSWGALIAGYVRIGFFKEALEVFYDMQVSGFRLNRA 245
Query: 255 ALVAALSACAEIGDLKLGKWIHSYVE-ENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
++V AL+ACA +G L G+WIH+YV+ + S+ R L ALI MYA CG IE A
Sbjct: 246 SIVGALTACAFLGALDQGRWIHAYVKRHHMSLDR-----MLGTALIDMYAKCGCIEMACS 300
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGF 358
VF +M R+ ++T +I+G A ++ A+ +TF+ VL+ACS G
Sbjct: 301 VFDEMDDRDVYAFTCLISGLANHDKSEAAIDLFNRMQDEGVVPNEVTFVCVLNACSRMGM 360
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLL 418
VDEG + FE M+ + I+P+I+HYGC+VDL RAG ++EA +V+ MP++P+ LG+LL
Sbjct: 361 VDEGLRIFESMSNRYVIEPQIQHYGCLVDLLGRAGKIEEAKQVVREMPLQPDSYTLGALL 420
Query: 419 LGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
CR+H + +L ++ LV G L++N+YA+A +W+D + +R+KM +
Sbjct: 421 DACRVHGDVQLGEEMVDSLVQRCLDH--GGVHVLLSNMYASADKWEDASKIRKKMEDKNI 478
Query: 479 RKPPGQSWVQINGVLHDFVAGDSTY 503
RK PG S +++NG + +FV GD +Y
Sbjct: 479 RKLPGCSSIEVNGTVCEFVTGDRSY 503
>gi|357142117|ref|XP_003572465.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 613
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 182/520 (35%), Positives = 281/520 (54%), Gaps = 33/520 (6%)
Query: 11 PATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLIN 70
P T + R + Q+H + NGF I L+ Y G L +
Sbjct: 98 PGVRPLTFTVSSVLKAAARREMLREGEQVHVHVFKNGFQTDERIATTLVDLYARCGRLDD 157
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
A +VF++ ++N MI + + E + L++ M P+ T++ + V
Sbjct: 158 ARRVFDRLLVKDAQLYNTMIAAYMEAGEVELAEELFEVM------PERNTHTLMEMVGGY 211
Query: 131 CGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSW 190
H +A+G N+ + T +++ + +G V AR +FD M R V +W
Sbjct: 212 SARGDMDSAKHVFEMANGVV-NMVLCTAMISGFAKTGS---VDDARSVFDGMRQRDVATW 267
Query: 191 NSLLK-GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARV 249
N ++ Y K G ++ A K+FD MP RNVV WT+MISG Q GK +QA+ LF +M+ + V
Sbjct: 268 NVMIGVMYAKCGLVEDARKVFDAMPERNVVCWTSMISGYTQVGKFKQAVKLFRDMQISGV 327
Query: 250 GLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIE 309
D + +S+C ++G L LG+++H+Y + + +G+ +S+ N+LI MY+ CG+I+
Sbjct: 328 KADDATIATVVSSCGQMGALDLGRYVHAYCDVH-GLGKG---ISVKNSLIDMYSKCGDIK 383
Query: 310 EAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSAC 353
+A+ +FR + +R+ SWT MI GFA G + EAL +TFLGVL++C
Sbjct: 384 KAHEIFRGLVKRDDFSWTVMIMGFAVNGLSGEALDLFAQMEEEGEVMPNEITFLGVLTSC 443
Query: 354 SHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAV 413
SHGG V++G F M++ +GI PRIEHYGCMVDL RA L+ EA ++ MP+ P+ A+
Sbjct: 444 SHGGLVEQGYHHFHRMSKVYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIEEMPIAPDVAI 503
Query: 414 LGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKM 473
SLL CR LA VA++ V E++P + G + L++NVYA RW DV VR M
Sbjct: 504 WRSLLFACRARGEVGLAEYVAER-VEELEPSRCGGNV-LLSNVYATTSRWVDVNKVRTGM 561
Query: 474 IKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTL 513
+ V K PG S +++NG H+F++GD T+ + IY L
Sbjct: 562 GRSRVSKRPGCSVIEVNGCAHEFLSGDETHLETEAIYNIL 601
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 199/428 (46%), Gaps = 44/428 (10%)
Query: 11 PATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLIN 70
P S++A ++ L + + L Q+H++ ++ G ++ +++ AKL+ + G+L
Sbjct: 5 PRLSARADEENRLVGLAARCASARQLEQLHARAVLLGHARSSFVAAKLVRAFADLGHLRA 64
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMID--KETEPDEYTYSFLLSVC 128
A V + + S +V LY QM P +T S +L
Sbjct: 65 ARAVAAVRAHSQS----------GSSAAARDAVALYAQMHRGCPGVRPLTFTVSSVLKAA 114
Query: 129 ARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSV 187
AR + REGEQVH V +G+ ++ I T L++LY CG + AR +FD + +
Sbjct: 115 ARREMLREGEQVHVHVFKNGFQTDERIATTLVDLY----ARCGRLDDARRVFDRLLVKDA 170
Query: 188 VSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRA 247
+N+++ Y++ G+++ A ++F+ MP RN + M+ G + G A +F EM
Sbjct: 171 QLYNTMIAAYMEAGEVELAEELFEVMPERNTHTLMEMVGGYSARGDMDSAKHVF-EMANG 229
Query: 248 RVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGE 307
V + V A +S A+ G + + + F R+ + + N + MYA CG
Sbjct: 230 VVNM--VLCTAMISGFAKTGSVDDARSV-------FDGMRQRDVATWNVMIGVMYAKCGL 280
Query: 308 IEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSA 352
+E+A VF M RN V WTSMI+G+ + G ++A+ T V+S+
Sbjct: 281 VEDARKVFDAMPERNVVCWTSMISGYTQVGKFKQAVKLFRDMQISGVKADDATIATVVSS 340
Query: 353 CSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDA 412
C G +D GR + G+ I ++D++S+ G + +A + + + +K +D
Sbjct: 341 CGQMGALDLGR-YVHAYCDVHGLGKGISVKNSLIDMYSKCGDIKKAHEIFRGL-VKRDDF 398
Query: 413 VLGSLLLG 420
+++G
Sbjct: 399 SWTVMIMG 406
>gi|297733959|emb|CBI15206.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 173/434 (39%), Positives = 255/434 (58%), Gaps = 57/434 (13%)
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
A +VF K ENP +WN MIRG R+ PEK+ YK+M K D +TYSFL+ VC +
Sbjct: 4 ALRVFGKIENPDGFLWNTMIRGLGRTRQPEKAFEFYKRMQVKGEVLDNFTYSFLVKVCGQ 63
Query: 131 CGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSW 190
G G+Q+H VL G +VF+R L+++Y
Sbjct: 64 LGSDLLGKQIHCNVLKHGLEEHVFVRNTLVHMY--------------------------- 96
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG 250
G K DI+ A +F+EMP +V+W T+I G+ ++A+ LF M ++ +
Sbjct: 97 -----GMFK--DIEAATHLFEEMPKSYLVAWNTIIDCNVYCGRYKEAIELFFRMLQSGLK 149
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEE 310
D V LSACA +G+L +G+ +HS ++ +G +VS++N+LI MYA CG +E
Sbjct: 150 PDDATFVVTLSACAALGELDIGRRVHSCIDHT-GLGN---VVSVSNSLIDMYAKCGVVEA 205
Query: 311 AYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACS 354
AY +F KM+ RN VSW +MI G A G+ EAL +TFLGVL ACS
Sbjct: 206 AYEIFNKMKGRNIVSWNTMILGLAMHGHGDEALELFSKMLEEKLATPNEVTFLGVLCACS 265
Query: 355 HGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL 414
HGG V+EGR++F+ M +++ I+P I+HYG MVD+ RAGL++EA+ L+++MP++ N V
Sbjct: 266 HGGMVEEGRRYFDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRLIKSMPIESNSIVW 325
Query: 415 GSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMI 474
+LL CR+H N ELA QV Q+L+ E++P+ ++ Y+ L+AN+YA+A +W V VR+ M
Sbjct: 326 RTLLAACRVHGNLELAEQVRQQLL-ELEPDHSSDYV-LLANMYASAGQWNKVVRVRKSMH 383
Query: 475 KMGVRKP-PGQSWV 487
GV+KP PG S++
Sbjct: 384 IRGVQKPKPGNSYI 397
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 120/253 (47%), Gaps = 21/253 (8%)
Query: 203 IDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSA 262
+D A ++F ++ + + W TMI G + + +A + M+ LD +
Sbjct: 1 MDYALRVFGKIENPDGFLWNTMIRGLGRTRQPEKAFEFYKRMQVKGEVLDNFTYSFLVKV 60
Query: 263 CAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRN 322
C ++G LGK IH V ++ G E V + N L+HMY +IE A +F +M +
Sbjct: 61 CGQLGSDLLGKQIHCNVLKH---GLEE-HVFVRNTLVHMYGMFKDIEAATHLFEEMPKSY 116
Query: 323 TVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFE 367
V+W ++I G +EA+ TF+ LSAC+ G +D GR+
Sbjct: 117 LVAWNTIIDCNVYCGRYKEAIELFFRMLQSGLKPDDATFVVTLSACAALGELDIGRRVHS 176
Query: 368 CMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNA 427
C++ G+ + ++D++++ G+++ A+ + M + N +++LG +H +
Sbjct: 177 CIDHT-GLGNVVSVSNSLIDMYAKCGVVEAAYEIFNKMKGR-NIVSWNTMILGLAMHGHG 234
Query: 428 ELASQVAQKLVAE 440
+ A ++ K++ E
Sbjct: 235 DEALELFSKMLEE 247
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 137/323 (42%), Gaps = 48/323 (14%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH ++ +G + ++ L+ Y + A +FE+ WN +I +
Sbjct: 72 QIHCNVLKHGLEEHVFVRNTLVHMYGMFKDIEAATHLFEEMPKSYLVAWNTIIDCNVYCG 131
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++++ L+ +M+ +PD+ T+ LS CA G G +VH + +G + V +
Sbjct: 132 RYKEAIELFFRMLQSGLKPDDATFVVTLSACAALGELDIGRRVHSCIDHTGLGNVVSVSN 191
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
+L+++Y +CG V A +F+ M R++VSWN+++ G G D A ++F +M
Sbjct: 192 SLIDMY----AKCGVVEAAYEIFNKMKGRNIVSWNTMILGLAMHGHGDEALELFSKMLEE 247
Query: 217 -----NVVSWTTMISGCAQNGKSRQALSLFNEMRR------------------ARVGL-- 251
N V++ ++ C+ G + F+ MRR R GL
Sbjct: 248 KLATPNEVTFLGVLCACSHGGMVEEGRRYFDIMRRDYNIQPTIKHYGSMVDILGRAGLVE 307
Query: 252 -------------DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNAL 298
+ + L+AC G+L+L + + + E EP S L
Sbjct: 308 EAYRLIKSMPIESNSIVWRTLLAACRVHGNLELAEQVRQQLLE-----LEPDHSSDYVLL 362
Query: 299 IHMYASCGEIEEAYGVFRKMQRR 321
+MYAS G+ + V + M R
Sbjct: 363 ANMYASAGQWNKVVRVRKSMHIR 385
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 182/523 (34%), Positives = 283/523 (54%), Gaps = 35/523 (6%)
Query: 36 LFQIHSQIIINGFSQKNYILAKLLAFYV---TSGYLINAHKVFEKTENPSTAIWNQMIRG 92
L Q HSQII G S N+++ L+ F TS L A K+F+ P ++N +I+G
Sbjct: 38 LRQYHSQIIRLGLSSHNHLIPPLINFCARASTSDALTYALKLFDSIPQPDAFLYNTIIKG 97
Query: 93 HARSET-PEKSVYL-YKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYC 150
S+ P S+ L Y M+ P+ +T+ LL C + + G Q+H + G+
Sbjct: 98 FLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIACRK---IQHGMQIHAHLFKFGFG 154
Query: 151 SNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIF 210
++ +L+++Y+ + AR +F +P VSW SL+ GY K G ID A+ IF
Sbjct: 155 AHSVCLNSLIHMYVTFQA---LEEARRVFHTIPHPDSVSWTSLISGYSKWGLIDEAFTIF 211
Query: 211 DEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG-LDQVALVAALSACAEIGDL 269
MP +N SW M++ Q + +A +LF+ M+ LD+ LSAC +G L
Sbjct: 212 QLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVATTMLSACTGLGAL 271
Query: 270 KLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR--RNTVSWT 327
GKWIH Y++ N G E + L A++ MY CG +E+A VF + R SW
Sbjct: 272 DQGKWIHEYIKRN---GIE-LDSKLTTAIVDMYCKCGCLEKALQVFHSLPLPCRWISSWN 327
Query: 328 SMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQN 372
MI G A G + A+ +TFL +L+AC+H G V+EGR +F M +
Sbjct: 328 CMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRNYFSYMIRV 387
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQ 432
+GI+PR+EH+GCMVDL RAG++ EA L+ MP+ P+ VLG+LL C+ H N EL +
Sbjct: 388 YGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSPDVTVLGTLLGACKKHRNIELGEE 447
Query: 433 VAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGV 492
+ ++++ E++P + Y+ L+AN+YA A +W+D A VR+ M GV+K PG S +++ G
Sbjct: 448 IGRRVI-ELEPNNSGRYV-LLANLYANAGKWEDAAKVRKLMDDRGVKKAPGFSMIELQGT 505
Query: 493 LHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLG 535
+H+F+AG+ + QA ++ + E+ GY D + + G
Sbjct: 506 VHEFIAGERNHPQAKELHAKVYEMLEHLKSVGYVADTNGVLHG 548
>gi|356567066|ref|XP_003551744.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 488
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 184/494 (37%), Positives = 280/494 (56%), Gaps = 33/494 (6%)
Query: 19 TTRQIFSLLQIR---NTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHK 73
TT F+L + + L +H+ +L KL F S G L AH+
Sbjct: 3 TTTVAFTLAHMAERCTCMRDLKLLHAHAFRTRLHDHTVVLGKLFRFAAVSPLGDLRYAHR 62
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGL 133
+F++ +P+T +N +IR HA S TP S + M PD+++++FLL +R
Sbjct: 63 MFDQMPHPTTFFYNTLIRAHAHSTTPSLSSLSFNLMRQNNVAPDQFSFNFLLKSRSRTTP 122
Query: 134 FREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPAR----SVVS 189
VHG VL G+C ++ ++ L++ Y G AR +F+D+ VVS
Sbjct: 123 LTHHNDVHGAVLKFGFCRHLHVQNGLIHFYANRGMTL---LARRVFEDVLQLGLEVDVVS 179
Query: 190 WNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARV 249
W+ LL +VK G+++ A ++FDEMP R+VVSWT M++G +Q + R+AL LF EMRR+ V
Sbjct: 180 WSGLLVAHVKAGELEVARRVFDEMPQRDVVSWTAMLTGYSQAKRPREALELFGEMRRSGV 239
Query: 250 GLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIE 309
D+V +V+ +SACA +GD++ G +H +VEEN G +V+L NALI MY CG +E
Sbjct: 240 WPDEVTMVSLVSACASLGDMETGMMVHRFVEEN-GFG---WMVALCNALIDMYGKCGCLE 295
Query: 310 EAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACS 354
EA+ VF M R++ ++W +M+T A G A EA +T L +L A +
Sbjct: 296 EAWRVFHGMTRKSLITWNTMVTVCANYGNADEAFRLFEWMVCSGVVPDSVTLLALLVAYA 355
Query: 355 HGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL 414
H G VDEG + FE M++++G++PRIEHYG ++D+ RAG + EA+ L+ N+P+ NDAV
Sbjct: 356 HKGLVDEGIRLFESMDRDYGVEPRIEHYGAVIDMLGRAGRLQEAYDLLTNIPIPCNDAVW 415
Query: 415 GSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMI 474
G+LL CRIH + E+ ++ +KL+ E GY L+ ++Y AA + + RQ M+
Sbjct: 416 GALLGACRIHGDVEMGEKLIKKLLELKPDE--GGYYILLRDIYVAAGQTVEANETRQAML 473
Query: 475 KMGVRKPPGQSWVQ 488
RK PG SWV+
Sbjct: 474 ASRARKNPGCSWVE 487
>gi|347954496|gb|AEP33748.1| chloroplast biogenesis 19, partial [Capsella bursa-pastoris]
Length = 489
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 167/418 (39%), Positives = 256/418 (61%), Gaps = 28/418 (6%)
Query: 115 EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLM---NLYLMSGGECG 171
EP+ T+ LLS CG F G + G +L C RT++M + M
Sbjct: 57 EPNHITFIALLS---GCGDFSSGSEALGDLLHGYACKLGHDRTHVMVGTAILGMYSKHSR 113
Query: 172 VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQN 231
V ARL+FD M ++ V+WN+++ GY++ G +D A K+FD+MP R+++SWT MI+G +
Sbjct: 114 VKKARLVFDYMEDKNSVTWNTMIDGYMRNGQVDNAVKMFDKMPERDLISWTAMINGFVKK 173
Query: 232 GKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV-EENFSVGREPV 290
G +AL+ F EM+ + V D VA++AAL+AC +G L G W+H YV ++F
Sbjct: 174 GFHEEALAWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVMSQDFKNN---- 229
Query: 291 LVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------- 343
V ++N+LI +Y CG +E A VF KM++R VSW S+I GFA G A E+L
Sbjct: 230 -VKVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQ 288
Query: 344 --------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLM 395
+TF G L+ACSH G V+EG ++F+ M ++ I PRIEHYGC+VDL+SRAG +
Sbjct: 289 EEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRL 348
Query: 396 DEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVAN 455
+EA +VQ+MPMKPN+ V+GSLL CR H N + ++ K +++++ + + Y+ L +N
Sbjct: 349 EEALKVVQSMPMKPNEVVIGSLLAACRTHGNNTVLAERLMKHLSDVNVKGHSNYVIL-SN 407
Query: 456 VYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTL 513
+YAA +W+ + +R+KM +G++K PG S ++I+ H F+AGDS + + + I + L
Sbjct: 408 MYAADGKWEGASQMRRKMKGLGLKKQPGFSSIEIDDCTHVFMAGDSAHVETADIREVL 465
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 138/327 (42%), Gaps = 48/327 (14%)
Query: 41 SQIIINGFSQKNYIL-AKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
++++ + KN + ++ Y+ +G + NA K+F+K W MI G +
Sbjct: 117 ARLVFDYMEDKNSVTWNTMIDGYMRNGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFH 176
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
E+++ +++M +PD L+ C G G VH V++ + +NV + +L
Sbjct: 177 EEALAWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVKVSNSL 236
Query: 160 MNLYLMSGGECGVGC---ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
++LY C GC AR +FD M R+VVSWNS++ G+
Sbjct: 237 IDLY------CRCGCVEFAREVFDKMEKRTVVSWNSVIVGF------------------- 271
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
A NG + ++L F +M+ D V AL+AC+ +G ++ G
Sbjct: 272 ------------AANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYF 319
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAK 335
++ + + + L+ +Y+ G +EEA V + M + N V S++
Sbjct: 320 QTMKRDHRISPR---IEHYGCLVDLYSRAGRLEEALKVVQSMPMKPNEVVIGSLLAACRT 376
Query: 336 QG---YAQEALLTFLGVLSACSHGGFV 359
G E L+ L ++ H +V
Sbjct: 377 HGNNTVLAERLMKHLSDVNVKGHSNYV 403
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 113/239 (47%), Gaps = 26/239 (10%)
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEI--GDLKLGKWI 275
+VSWT+ I+ +NG+ +A F++MR A V + + +A LS C + G LG +
Sbjct: 25 IVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGCGDFSSGSEALGDLL 84
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
H Y +G + V + A++ MY+ +++A VF M+ +N+V+W +MI G+ +
Sbjct: 85 HGYA---CKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYMEDKNSVTWNTMIDGYMR 141
Query: 336 QGYAQEA-----------LLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGC 384
G A L+++ +++ GF +E +F M Q G+KP ++
Sbjct: 142 NGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFREM-QISGVKP--DYVAI 198
Query: 385 MVDLFSRAGLMDEAFSL-----VQNMPMKPNDAVLGSLL-LGCRIHNNAELASQVAQKL 437
+ L + L +F L V + K N V SL+ L CR E A +V K+
Sbjct: 199 IAALNACTNLGALSFGLWVHRYVMSQDFKNNVKVSNSLIDLYCRC-GCVEFAREVFDKM 256
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 121/268 (45%), Gaps = 34/268 (12%)
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP----HRNVVSWTTMISGCAQNGKSRQALS 239
+ ++VSW S + + G + A K F +M N +++ ++SGC +AL
Sbjct: 22 SETIVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGCGDFSSGSEALG 81
Query: 240 LFNEMRRARVGLDQVALV---AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
++G D+ ++ A L ++ +K + + Y+E+ SV N
Sbjct: 82 DLLHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYMEDKNSVTW--------N 133
Query: 297 ALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF---------- 346
+I Y G+++ A +F KM R+ +SWT+MI GF K+G+ +EAL F
Sbjct: 134 TMIDGYMRNGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKP 193
Query: 347 -----LGVLSACSHGGFVDEGRQFFE-CMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFS 400
+ L+AC++ G + G M+Q++ K ++ ++DL+ R G ++ A
Sbjct: 194 DYVAIIAALNACTNLGALSFGLWVHRYVMSQDF--KNNVKVSNSLIDLYCRCGCVEFARE 251
Query: 401 LVQNMPMKPNDAVLGSLLLGCRIHNNAE 428
+ M K S+++G + NA
Sbjct: 252 VFDKME-KRTVVSWNSVIVGFAANGNAH 278
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H ++ F + L+ Y G + A +VF+K E + WN +I G A +
Sbjct: 217 VHRYVMSQDFKNNVKVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGN 276
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+S+ +++M ++ +PD T++ L+ C+ GL EG
Sbjct: 277 AHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEG 315
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 190/566 (33%), Positives = 295/566 (52%), Gaps = 39/566 (6%)
Query: 1 MLVEEIIPANPATSSKA----------LTTRQIFSLLQIRNTTKTLFQIHSQIIINGF-- 48
M V + PAT+ A LT + SLL +T + ++H+ ++ G
Sbjct: 260 MAVAVLPTGAPATARDAGGGHHHHGAVLTADRAVSLLTSCSTARRAAELHAAVLRTGLLD 319
Query: 49 SQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQ 108
+ + +L Y SG L + + +T +P+ + I H+ ++ L
Sbjct: 320 ATDRAVAFRLQRAYAASGRLDLSLALLRRTRDPTAIFYTSAIHAHSSRGHRLPALALLSD 379
Query: 109 MIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGG 168
M+ + P +T S L C GL G +HG + ++ T L+ +Y +G
Sbjct: 380 MLAQGLLPTAHTLSASLPACR--GL-SPGRALHGYAFKLALAGDSYVATALLGMYARAGD 436
Query: 169 ECGVGCARLLFDDM-PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISG 227
AR LFDDM P VVS ++L Y G +D A +FD +P ++ V W MI G
Sbjct: 437 ATA---ARALFDDMLPDPHVVSVTAMLTCYADMGALDDARSLFDGLPTKDFVCWNAMIDG 493
Query: 228 CAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGR 287
Q+G+ +AL LF M + V D+V +V LSA A++G ++ GKW+HSYV+ + R
Sbjct: 494 YTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNS---RR 550
Query: 288 EPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---- 343
+ V + ALI MY CG + +A VF + ++ V W +MI G+A G +++AL
Sbjct: 551 VQLSVRVGTALIDMYCKCGSLGDAVDVFHGIGDKDIVVWNAMINGYAMHGDSRKALEMFV 610
Query: 344 -----------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRA 392
+TF+G+L+ACSH G V+EGR+FF+ M + +GI P+IEHYGCMVDL RA
Sbjct: 611 QSREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSMEREYGIDPKIEHYGCMVDLLGRA 670
Query: 393 GLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLAL 452
GL+ EAF LVQ+M + P+ + SLL CR+H N L Q+A LVA+ +G L
Sbjct: 671 GLIKEAFCLVQSMKITPDAVMWVSLLAACRLHKNMSLGQQIADYLVAK--GLANSGMYIL 728
Query: 453 VANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKT 512
++N+YAA W +VA VR M G++K PG S ++I+ +++FVAGD ++ + IY
Sbjct: 729 LSNIYAAVGNWGEVARVRSMMKASGIQKEPGCSSIEIDREVYEFVAGDMSHPRTDEIYVM 788
Query: 513 LGEITMQAMQEGYKPDISELFLGIEE 538
L ++ + G+ P + ++E
Sbjct: 789 LDKMNGLVKEHGHVPQTELVLHDLDE 814
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 190/586 (32%), Positives = 300/586 (51%), Gaps = 68/586 (11%)
Query: 6 IIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS 65
+ P NP L + +L KTL +HS++ F + + KL+ Y
Sbjct: 26 VSPQNPV-----LVLELLGKVLDQYPDIKTLKNVHSKVFNLSFHENPSLGIKLMRAYAAR 80
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
G A VF+ + +N MIR + + + ++ +++ M+ PD YTY +L
Sbjct: 81 GEPGLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVL 140
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPA 184
C+ R G Q+HG V G N+F+ L+ LY G+CG + AR + D+M +
Sbjct: 141 KACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALY----GKCGCLPEARCVLDEMQS 196
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEMP------------------------------ 214
+ VVSWNS++ GY + D A I EM
Sbjct: 197 KDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSSENVLYVE 256
Query: 215 -------HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIG 267
+++VSW MIS +N +++ L+ +M + V D + + L AC ++
Sbjct: 257 EMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLS 316
Query: 268 DLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
L LG+ IH YVE P ++ L N+LI MYA CG +E+A VF +M+ R+ SWT
Sbjct: 317 ALLLGRRIHEYVERKKLC---PNML-LENSLIDMYARCGCLEDAKRVFDRMKFRDVASWT 372
Query: 328 SMIT--GFAKQGYAQEALLT-------------FLGVLSACSHGGFVDEGRQFFECMNQN 372
S+I+ G QGY AL T F+ +LSACSH G ++EG+ +F+ M +
Sbjct: 373 SLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDD 432
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQ 432
+ I P IEH+ C+VDL R+G +DEA+++++ MPMKPN+ V G+LL CR+++N ++
Sbjct: 433 YKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGIL 492
Query: 433 VAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGV 492
A KL+ ++ PE+ +GY L++N+YA A RW +V A+R M + +RK PG S V++N
Sbjct: 493 AADKLL-QLAPEE-SGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQ 550
Query: 493 LHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+H F+AGD+ + Q+ IY+ L + + + GY P +EE
Sbjct: 551 VHTFLAGDTYHPQSKEIYEELSVLVGKMKELGYVPKTDSALHDVEE 596
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 175/517 (33%), Positives = 278/517 (53%), Gaps = 57/517 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H +I G + + L+ Y G + A +F+K + W +I G+A+
Sbjct: 218 KVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQG 277
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+ ++ L ++M E P++ TY+ +L C G++VH ++ SGY
Sbjct: 278 QVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGY-------- 329
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
R + N+L+ Y K G + A K+F ++PHR+
Sbjct: 330 --------------------------GREIWVVNALITMYCKCGGLKEARKLFGDLPHRD 363
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VV+WT M++G AQ G +A+ LF M++ + D++ +AL++C+ L+ GK IH
Sbjct: 364 VVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQ 423
Query: 278 -YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
V +S+ V L +AL+ MYA CG +++A VF +M RN V+WT+MITG A+
Sbjct: 424 QLVHAGYSLD-----VYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQH 478
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G +EAL +TF VLSAC+H G V+EGR+ F M ++GIKP +EH
Sbjct: 479 GRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEH 538
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
Y C VDL RAG ++EA +++ MP +P +V G+LL CRIH++ E + A+ V ++
Sbjct: 539 YSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAEN-VLKL 597
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
DP+ Y+AL +N+YAAA R++D VRQ M K V K PGQSW++++G +H F D
Sbjct: 598 DPDDDGAYVAL-SNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDK 656
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++ +A IY LG++T Q ++GY PD + ++E
Sbjct: 657 SHPEAKEIYAELGKLTEQIKEQGYVPDTRFVLHDVDE 693
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 138/301 (45%), Gaps = 56/301 (18%)
Query: 124 LLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDM 182
LL CAR +G +VH +L SG N ++ L+++Y +CG + AR +FD +
Sbjct: 102 LLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMY----AKCGSLTDARRVFDGI 157
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
R++VSW ++++ +V A+K ++ M ++GC
Sbjct: 158 RDRNIVSWTAMIEAFVAGNQNLEAYKCYETMK----------LAGCKP------------ 195
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMY 302
D+V V+ L+A L++G+ +H + + + EP + +L+ MY
Sbjct: 196 ---------DKVTFVSLLNAFTNPELLQVGQKVHMEIAKA-GLELEP---RVGTSLVGMY 242
Query: 303 ASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFL 347
A CG+I +A +F K+ +N V+WT +I G+A+QG AL +T+
Sbjct: 243 AKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYT 302
Query: 348 GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM 407
+L C+ ++ G++ + Q+ G I ++ ++ + G + EA L ++P
Sbjct: 303 SILQGCTTPLALEHGKKVHRYIIQS-GYGREIWVVNALITMYCKCGGLKEARKLFGDLPH 361
Query: 408 K 408
+
Sbjct: 362 R 362
>gi|449517761|ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 168/496 (33%), Positives = 278/496 (56%), Gaps = 51/496 (10%)
Query: 75 FEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETE-PDEYTYSFLLSVCARCGL 133
F + ENP+ ++N MI+G P +++ Y M+++ P YT+S L+ C
Sbjct: 94 FTQMENPNVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCA 153
Query: 134 FREGEQVHGRVLASGYCSNVFIRTNLMNLY-------------------------LMSGG 168
G+ VH + G+ S++F++T L++ Y M
Sbjct: 154 VELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMLSA 213
Query: 169 ECGVG---CARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMI 225
VG AR LF++MP R+ +WN+++ GY + G+++ A +F++MP ++++SWTTMI
Sbjct: 214 LARVGDMDSARKLFEEMPERNTATWNTMIDGYTRLGNVESAELLFNQMPTKDIISWTTMI 273
Query: 226 SGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSV 285
+ +QN + + AL++++EMR + D+V + SACA IG L+LGK IH YV S
Sbjct: 274 TCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYV---MSQ 330
Query: 286 GREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-- 343
G + V + +AL+ MYA CG ++ + +F K+ +N W ++I G A GYA++AL
Sbjct: 331 GLN-LDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRM 389
Query: 344 -------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFS 390
+TF+ +LSAC+H G VDEGR F M +++ I+P I HYGCMVD+ S
Sbjct: 390 FAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLS 449
Query: 391 RAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYL 450
++G ++EA L+++M +PN + G+LL GC++H N E+A ++L+ ++P +G+
Sbjct: 450 KSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMI-LEP-MNSGHY 507
Query: 451 ALVANVYAAAKRWQDVAAVRQKMIKMGV-RKPPGQSWVQINGVLHDFVAGDSTYKQASLI 509
L+ ++YA K W +VA +R M + GV +K PG SW+++ G +H F A ++ + I
Sbjct: 508 NLLVSMYAEEKDWMEVAHIRSMMKEKGVEKKYPGSSWIELEGTIHQFSASADSHPDSDKI 567
Query: 510 YKTLGEITMQAMQEGY 525
Y L E+ Q GY
Sbjct: 568 YFILTELDGQLKLAGY 583
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 128/310 (41%), Gaps = 71/310 (22%)
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETE---------- 115
G + +A K+FE+ +TA WN MI G+ R E + L+ QM K+
Sbjct: 218 GDMDSARKLFEEMPERNTATWNTMIDGYTRLGNVESAELLFNQMPTKDIISWTTMITCYS 277
Query: 116 ---------------------PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVF 154
PDE T S + S CA G G+++H V++ G +V+
Sbjct: 278 QNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVY 337
Query: 155 IRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
I + L+++Y +CG + + L+F + +++ WN++
Sbjct: 338 IGSALVDMY----AKCGSLDLSLLIFFKLTDKNLYCWNAV-------------------- 373
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK 273
I G A +G + +AL +F M R ++ + V ++ LSAC G + G+
Sbjct: 374 -----------IEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGR 422
Query: 274 WIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITG 332
+ ++ + + + ++ M + G + EA + + M+ N++ W +++ G
Sbjct: 423 SRFLSMTRDYDIRPD---IRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNG 479
Query: 333 FAKQGYAQEA 342
G + A
Sbjct: 480 CKLHGNCEIA 489
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH ++ G + YI + L+ Y G L + +F K + + WN +I G A
Sbjct: 322 EIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHG 381
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
EK++ ++ M ++ P+ T+ +LS C GL EG
Sbjct: 382 YAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEG 421
>gi|224059226|ref|XP_002299777.1| predicted protein [Populus trichocarpa]
gi|222847035|gb|EEE84582.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 176/443 (39%), Positives = 259/443 (58%), Gaps = 45/443 (10%)
Query: 113 ETEPDEYTYSFLLSVCARCGLFREGEQV------HGRVLASGYCSNVFIRTNLMNLYLMS 166
E +P+ T+ LLS CA L +G + + R L C N+ + T L+++Y
Sbjct: 5 EIDPNHVTFITLLSGCA--DLPSQGNSLGPLLHAYTRKLGLDTC-NLMVGTALVDMY--- 58
Query: 167 GGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMI 225
+CG V +RL FD++ ++ SWN+++ G+V+ G I A ++FDEMP R V+SWT +I
Sbjct: 59 -AKCGHVELSRLCFDELKVKNSFSWNTMIDGFVRNGKIREAIEVFDEMPERGVISWTVLI 117
Query: 226 SGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY-----VE 280
+G + G +AL F +M+ ++V D+V +V LSACA +G L LG W+H Y +
Sbjct: 118 NGFVKMGLFEEALEWFRKMQVSKVEPDRVTIVTVLSACANLGALGLGLWVHRYALKKGLR 177
Query: 281 ENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQ 340
+N V + N+LI +Y+ CG IE A VF KM R VSW S+I G A G+ +
Sbjct: 178 DN---------VKICNSLIDLYSRCGAIELARQVFEKMGERTLVSWNSIIGGLAANGFTE 228
Query: 341 EAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCM 385
EAL ++F G L+ACSH G VDEG ++F+ M + I PRIEHYGC+
Sbjct: 229 EALEHFDLMQKQGFKPNDVSFTGALTACSHTGLVDEGLKYFDIMERVHKISPRIEHYGCI 288
Query: 386 VDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQ 445
VDL+SRAG +++A S+VQNMPMKPN+ V+GSLL CR + ELA ++ LV +DP
Sbjct: 289 VDLYSRAGRLEDAMSVVQNMPMKPNEVVVGSLLAACRTRGDVELAERLMNYLV-HLDPGA 347
Query: 446 AAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQ 505
+ Y+ L++N+YAA RW R M +G++K PG S ++I +H+FVAGD ++ +
Sbjct: 348 DSNYV-LLSNIYAAVGRWDGACKQRMTMKALGIQKKPGFSSIEIGCDIHEFVAGDKSHDK 406
Query: 506 ASLIYKTLGEITMQAMQEGYKPD 528
A IY L ++ GY P+
Sbjct: 407 AEDIYSMLELLSFDQALCGYVPE 429
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 93/190 (48%), Gaps = 9/190 (4%)
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
+V +G + A +VF++ W +I G + E+++ +++M + EPD T
Sbjct: 89 FVRNGKIREAIEVFDEMPERGVISWTVLINGFVKMGLFEEALEWFRKMQVSKVEPDRVTI 148
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFD 180
+LS CA G G VH L G NV I +L++LY CG + AR +F+
Sbjct: 149 VTVLSACANLGALGLGLWVHRYALKKGLRDNVKICNSLIDLY----SRCGAIELARQVFE 204
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR----NVVSWTTMISGCAQNGKSRQ 236
M R++VSWNS++ G G + A + FD M + N VS+T ++ C+ G +
Sbjct: 205 KMGERTLVSWNSIIGGLAANGFTEEALEHFDLMQKQGFKPNDVSFTGALTACSHTGLVDE 264
Query: 237 ALSLFNEMRR 246
L F+ M R
Sbjct: 265 GLKYFDIMER 274
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 121/291 (41%), Gaps = 45/291 (15%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H + G I L+ Y G + A +VFEK + WN +I G A +
Sbjct: 167 VHRYALKKGLRDNVKICNSLIDLYSRCGAIELARQVFEKMGERTLVSWNSIIGGLAANGF 226
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG-------EQVHG---RVLASG 148
E+++ + M + +P++ +++ L+ C+ GL EG E+VH R+ G
Sbjct: 227 TEEALEHFDLMQKQGFKPNDVSFTGALTACSHTGLVDEGLKYFDIMERVHKISPRIEHYG 286
Query: 149 YCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPAR-SVVSWNSLLKGYVKRGDIDGAW 207
+++ R + A + +MP + + V SLL RGD++ A
Sbjct: 287 CIVDLYSRAGRLE------------DAMSVVQNMPMKPNEVVVGSLLAACRTRGDVELAE 334
Query: 208 KIFDEMPH------RNVVSWTTMISGCAQ-NGKSRQALSLFNEMRRARVGLDQVALVAAL 260
++ + + H N V + + + + +G +Q +++ +G+ + +++
Sbjct: 335 RLMNYLVHLDPGADSNYVLLSNIYAAVGRWDGACKQRMTM------KALGIQKKPGFSSI 388
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEA 311
+I + G H E+ +S+ L+S + AL CG + EA
Sbjct: 389 EIGCDIHEFVAGDKSHDKAEDIYSMLE---LLSFDQAL------CGYVPEA 430
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 171/538 (31%), Positives = 284/538 (52%), Gaps = 61/538 (11%)
Query: 15 SKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKV 74
+ A+T ++ R + ++H I G+ K +++ LL YV L A +
Sbjct: 53 ADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDL 112
Query: 75 FEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLF 134
F++ + W MI ++ ++ +K++ M + P+ +TYS +L C
Sbjct: 113 FDEMPERNVVSWTTMISAYS-NKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNL 171
Query: 135 REGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLL 194
R Q+H ++ +G S+VF+R+ L+++Y
Sbjct: 172 R---QLHCGIIKTGLESDVFVRSALIDVY------------------------------- 197
Query: 195 KGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQV 254
K D+D A +FDEMP R++V W ++I G AQN +AL+LF M+RA DQ
Sbjct: 198 ---SKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQA 254
Query: 255 ALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGV 314
L + L AC + L+LG+ +H +V ++ +L NNALI MY CG +E+A
Sbjct: 255 TLTSVLRACTGLALLELGRQVHVHV---LKFDQDLIL---NNALIDMYCKCGSLEDANSA 308
Query: 315 FRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFV 359
F +M ++ +SW++M+ G A+ GY+++AL +T LGVL ACSH G V
Sbjct: 309 FSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLV 368
Query: 360 DEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLL 419
++G +F M + +G+ P EHYGC++DL RAG +DEA L+ M +P+ +LL
Sbjct: 369 EKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLG 428
Query: 420 GCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVR 479
CR+H N +LA A+K++ E++PE A Y+ L++N+YA +RW+DVA VR+ M G+R
Sbjct: 429 ACRVHRNVDLAIYAAKKII-ELEPEDAGTYI-LLSNIYANTQRWEDVAEVRKTMTNRGIR 486
Query: 480 KPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIE 537
K PG SW++++ +H F+ GD+++ + I + L ++ + M GY PD + + +E
Sbjct: 487 KTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRLNDLIERVMGVGYVPDTNFVLQDLE 544
>gi|147799543|emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]
Length = 613
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 185/479 (38%), Positives = 279/479 (58%), Gaps = 44/479 (9%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY--LINAHKVFEKTENPSTAIWNQMIR 91
+ L Q+H+Q+I + A+LL F S + L A K+F P+ +N +IR
Sbjct: 2 QDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTLIR 61
Query: 92 GHARSETPEKSVYLYKQMI-DKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYC 150
+ S P ++ ++ +M+ D EP+ +T+ + C R REG QVHG + G
Sbjct: 62 ALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFGLD 121
Query: 151 SNVFIRTNLMNLYLMSGGECGV--GCARLLFD-----------DMPAR---SVVSWNSLL 194
S+ F+ +N++ +YL CGV RL + D R VV WN ++
Sbjct: 122 SDEFVVSNVVRMYL----SCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMI 177
Query: 195 KGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQV 254
GYV+ G+++ A +FDEMP R+VVSW MI+G AQ+G ++A+ +F EM+ A V + V
Sbjct: 178 DGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYV 237
Query: 255 ALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGV 314
LV+ L A + +G L+LGKW+H Y N ++G + VL S ALI MYA CG IE+A V
Sbjct: 238 TLVSVLPAMSRLGALELGKWVHLYAVRN-NIGVDDVLGS---ALIDMYAKCGSIEKALQV 293
Query: 315 FRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFV 359
F + +RN V+W+++I G A G A++ L +T++G+LSACSH G V
Sbjct: 294 FEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLV 353
Query: 360 DEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLL 419
+EGR FF+ M + G++PRIEHYGCMVDL RAGL++E+ L+ NMP+KP+D + +LL
Sbjct: 354 NEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLG 413
Query: 420 GCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
C++H N E+ +VA+ L+ E+ P + Y+AL +N+YA+ W+ VA VR M +M V
Sbjct: 414 ACKMHGNVEMGKRVAEHLM-ELAPHDSGSYVAL-SNIYASLGNWEGVAKVRLMMKEMDV 470
>gi|115456858|ref|NP_001052029.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|38345581|emb|CAE01779.2| OSJNBa0027H06.17 [Oryza sativa Japonica Group]
gi|113563600|dbj|BAF13943.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|125589117|gb|EAZ29467.1| hypothetical protein OsJ_13541 [Oryza sativa Japonica Group]
gi|215736988|dbj|BAG95917.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 531
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 182/536 (33%), Positives = 285/536 (53%), Gaps = 36/536 (6%)
Query: 10 NPATSSKALTTRQIFSL-LQIRNTTKTLFQIHSQIIINGFSQKN-YILAKLLAFYVTSGY 67
+P T S R I SL +R + IH ++ G ++ LL+ Y G
Sbjct: 2 HPLTLSSTALLRLIKSLSPAVRRAHLSASSIHCLLLKAGLLHVGAHLPTALLSAYAALGS 61
Query: 68 LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSV 127
+A ++F++ M R H S +++ ++ M+ PD + L
Sbjct: 62 PDHARRLFDEMPEQGLVPRTAMARAHVASGQAAQAIAVFGDMVADGVFPDNVALAVALGA 121
Query: 128 CARCGLF----REGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDM 182
C G + G+++H ++ SG +VF+ T L+ +Y GECG + +R +FDDM
Sbjct: 122 CHGAGSWTARRNPGKKIHALIVTSGIEPDVFVSTELIRVY----GECGKLAVSRRVFDDM 177
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
P+RS ++WN++L Y + G +D A+++F MP R+VVSW T+++G G+ R+AL LF
Sbjct: 178 PSRSTITWNAMLHQYARHGKVDTAYELFLAMPRRDVVSWNTVMAGYCVAGRCREALGLFR 237
Query: 243 EM---RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
+M V + + L ACA G L+ G W+H+Y+E N R L+ LI
Sbjct: 238 QMVSPSSCAVHPNVPTMSTILGACAGAGCLETGIWVHAYIERN----RMNDDGYLDRCLI 293
Query: 300 HMYASCGEIEEAYGVFRKMQR-RNTVSWTSMITGFAKQGYAQEAL--------------- 343
MY CG I+ A VF K R R+ SWT++I G A G A +AL
Sbjct: 294 DMYCKCGSIDNALQVFEKAPRKRDLFSWTTVICGLAMHGRATDALRMFDMMQDNGICPDD 353
Query: 344 LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQ 403
+T +GVL+AC+HGG VDEG +F M + I P+IEHYGCM+DL R G + EA+S+++
Sbjct: 354 VTLVGVLNACAHGGLVDEGLGYFYSMEAKFRITPKIEHYGCMIDLLGRVGRLQEAYSMIR 413
Query: 404 NMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRW 463
MPM PN + G+ L C++H N EL A++L +DP+ G + +++++YA A+ W
Sbjct: 414 TMPMDPNTVIWGAFLSACKVHGNMELGKIAAEELT-RLDPDDPWGRV-MLSSMYAKAQDW 471
Query: 464 QDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
+A R++M M V+K PG S +++ G +H+FVAG S + Q + I L ++ Q
Sbjct: 472 IGLARERREMNSMQVKKTPGCSSIELKGEVHEFVAGGSQHPQYAEICSVLQDVEAQ 527
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 1/133 (0%)
Query: 6 IIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS 65
+ P++ A T I +T +H+ I N + Y+ L+ Y
Sbjct: 240 VSPSSCAVHPNVPTMSTILGACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKC 299
Query: 66 GYLINAHKVFEKTENPSTAI-WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFL 124
G + NA +VFEK W +I G A ++ ++ M D PD+ T +
Sbjct: 300 GSIDNALQVFEKAPRKRDLFSWTTVICGLAMHGRATDALRMFDMMQDNGICPDDVTLVGV 359
Query: 125 LSVCARCGLFREG 137
L+ CA GL EG
Sbjct: 360 LNACAHGGLVDEG 372
>gi|449477795|ref|XP_004155125.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Cucumis sativus]
Length = 579
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 185/529 (34%), Positives = 284/529 (53%), Gaps = 61/529 (11%)
Query: 21 RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV--TSGYLINAHKVFEKT 78
+ I +LLQ N+ K L +IH+ +I++G I KLL F SG L A +F +
Sbjct: 5 KAILALLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQLLFHQM 64
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMI-DKETEPDEYTYSFLLSVCARCGLFREG 137
E P T WN +IRG A+S +P ++ Y QM+ D + PD +T+SF+L C R R+
Sbjct: 65 ECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERIKAERKC 124
Query: 138 EQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGY 197
++VHG V+ GY ++V + TNL+ Y G C AR +FD MPAR +V+WN+++ +
Sbjct: 125 KEVHGSVIRCGYDADVIVCTNLVKCYSAMGLVC---IARQVFDKMPARDLVAWNAMISCF 181
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
+Q G ++AL +N+MR V +D LV
Sbjct: 182 -------------------------------SQQGLHQEALQTYNQMRSENVDVDGFTLV 210
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
+S+CA +G L +G +H + EN G + L + NALI MYA CG +++A +F +
Sbjct: 211 GLISSCAHLGALNIGVQMHRFAREN---GLDQSLY-VGNALIDMYAKCGSLDQAILIFDR 266
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEG 362
MQR++ +W SMI G+ G EA+ +TFLG+L CSH G V EG
Sbjct: 267 MQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARIQPNPVTFLGLLCGCSHQGLVQEG 326
Query: 363 RQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG-C 421
++F M+ + +KP ++HYGC+VDL+ RAG +D+A +V N ND+VL +LLG C
Sbjct: 327 VKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKALEIVSNSS--HNDSVLWRILLGSC 384
Query: 422 RIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKP 481
+IH N + ++A ++E+ +AG L+A +YA K VA +R+ + G +
Sbjct: 385 KIHKNVTIG-EIAMNRLSELGA-TSAGDCILLATIYAGEKDKAGVARMRKMIKSQGKKTT 442
Query: 482 PGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
PG SW++I +H FV D +++ + +Y+ L E+ QA GY D S
Sbjct: 443 PGWSWIEIGEQVHKFVVDDKSHRYSVEVYEKLREVIHQASFFGYVGDES 491
>gi|357517181|ref|XP_003628879.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522901|gb|AET03355.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 633
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 188/511 (36%), Positives = 284/511 (55%), Gaps = 44/511 (8%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
FQ+H ++ NGF ++ LL FY G ++NA+KVF+++ +N MI G AR
Sbjct: 138 FQVHCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTMINGFARK 197
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYC--SNVF 154
++ +M PDEYT+ LLS C+ +R G QVHG V C NV
Sbjct: 198 GDVSGCFRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFGGNVL 257
Query: 155 IRTNLMNLYLMSGGECGVGCARLLFDDM------PARSVVS-WNSLLKGYVKRGDIDGAW 207
+ L+++Y C RL+ + P +SVV+ W SL+ Y RG++ A
Sbjct: 258 LVNKLVDMY--------AKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVAR 309
Query: 208 KIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIG 267
++FD+M R+VVSWT MISG + G ++AL LF ++ + D+VA+VAALSACA +G
Sbjct: 310 RLFDQMGERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLG 369
Query: 268 DLKLGKWIH-SYVEENF--SVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM--QRRN 322
L+LG+ IH Y EN+ S+ R +A++ MYA CG I+ A VFRK ++
Sbjct: 370 ALELGRRIHRQYAGENWTCSINR-----GFTSAVVDMYAKCGSIDIALDVFRKTSDDKKT 424
Query: 323 TVSWTSMITGFAKQG---YAQEAL------------LTFLGVLSACSHGGFVDEGRQFFE 367
T + S+I+G A G YA+ +TF+ VLSAC H G VD G++ FE
Sbjct: 425 TFLYNSIISGLAHHGRGEYAKNLFEEMGLLGLKPDNITFVAVLSACGHCGLVDFGKKLFE 484
Query: 368 CMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNA 427
M +G+ P +EHYGCMVDL RAG +DEA L+ MP K N + +LL C++H +
Sbjct: 485 SMFTVYGVSPEMEHYGCMVDLLGRAGHLDEAHRLILKMPFKANAVIWRALLSACKVHGDV 544
Query: 428 ELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWV 487
LA + +LV E+ + AGY+ L +N+ + + + A++R+ + +G++KPPG S+V
Sbjct: 545 ALARVASYELV-ELQHDHGAGYVML-SNMLSDTDQHDEAASLRKAIDNVGIQKPPGWSYV 602
Query: 488 QINGVLHDFVAGDSTYKQASLIYKTLGEITM 518
++N LH F+AGD ++ +A L +I +
Sbjct: 603 EMNRSLHKFLAGDKSHPEAKTTELMLRDINI 633
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/481 (25%), Positives = 209/481 (43%), Gaps = 98/481 (20%)
Query: 16 KALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAH--- 72
+ L+ +I SLL T + QI++ II+ G ++ L FY +S + H
Sbjct: 10 RFLSNERIKSLLSSCKTMQQAHQIYAHIIVTGRHNNLHLSTTLFTFYASSSSSQSLHHSH 69
Query: 73 KVFEKTENPSTAIWNQMIRGHARSETPEKSVY-LYKQMIDKETEPDEYTYSFLLSVCARC 131
+F + NP +WN +I+ +++ +P + + L+K M++ PD +T+ FLL CA
Sbjct: 70 TLFTQITNPDIFLWNAIIKAYSQIHSPPQHPFSLFKTMLNSSVLPDSFTFPFLLKACANV 129
Query: 132 GLF--REGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVG---CARLLFDDMPARS 186
+ + G QVH VL +G+ S+VF+ L+N Y CG G A +FD+ R
Sbjct: 130 LISAPQFGFQVHCHVLRNGFGSDVFVNNALLNFY------CGFGDVVNAYKVFDESFVRD 183
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
VS+N+++ G+ ++GD+ G +++ F EMR
Sbjct: 184 CVSFNTMINGFARKGDVSGCFRV-------------------------------FGEMRG 212
Query: 247 ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC- 305
V D+ VA LS C+ + D ++G+ +H V VL L N L+ MYA C
Sbjct: 213 VCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFGGNVL--LVNKLVDMYAKCG 270
Query: 306 --------------------------------GEIEEAYGVFRKMQRRNTVSWTSMITGF 333
GE++ A +F +M R+ VSWT+MI+G+
Sbjct: 271 RLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMGERDVVSWTAMISGY 330
Query: 334 AKQGYAQEALLTF---------------LGVLSACSHGGFVDEGRQFF-ECMNQNWGIKP 377
+ G QEAL F + LSAC+ G ++ GR+ + +NW
Sbjct: 331 SHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLGALELGRRIHRQYAGENWTCSI 390
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL-GSLLLGCRIHNNAELASQVAQK 436
+VD++++ G +D A + + L S++ G H E A + ++
Sbjct: 391 NRGFTSAVVDMYAKCGSIDIALDVFRKTSDDKKTTFLYNSIISGLAHHGRGEYAKNLFEE 450
Query: 437 L 437
+
Sbjct: 451 M 451
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 178/509 (34%), Positives = 288/509 (56%), Gaps = 37/509 (7%)
Query: 49 SQKNYILAK---LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYL 105
S++N+ L LL +V ++ A + F+ + WN +I G+A++ +++
Sbjct: 208 SRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEA--- 264
Query: 106 YKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLM 165
+Q+ D+ D +T++ ++S + + E ++ R+ S N M +
Sbjct: 265 -RQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVS-----WNAMLAGYV 318
Query: 166 SGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMI 225
G V A+ LFD MP R+V +WN+++ GY + G I A +FD+MP R+ VSW MI
Sbjct: 319 QGER--VEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMI 376
Query: 226 SGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS-YVEENFS 284
+G +Q+G S +AL LF M R L++ + +ALS CA++ L+LGK +H V+ +
Sbjct: 377 AGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYE 436
Query: 285 VGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL- 343
G + NAL+ MY CG IEEA +F++M ++ VSW +MI G+++ G+ +EAL
Sbjct: 437 TG-----CFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALR 491
Query: 344 --------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLF 389
T + VLSACSH G VD+GRQ+F M Q++G++P +HY CMVDL
Sbjct: 492 FFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLL 551
Query: 390 SRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGY 449
RAGL++EA +L++NMP +P+ A+ G+LL R+H N ELA A K+ A ++PE + Y
Sbjct: 552 GRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFA-MEPENSGMY 610
Query: 450 LALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLI 509
+ L++N+YA++ RW DV +R +M GV+K PG SW++I H F GD + + I
Sbjct: 611 V-LLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEI 669
Query: 510 YKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ L ++ ++ + GY S + +EE
Sbjct: 670 FAFLEDLDLRMKKAGYVSKTSVVLHDVEE 698
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 123/442 (27%), Positives = 195/442 (44%), Gaps = 105/442 (23%)
Query: 63 VTSGYLIN-----AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
+ SGYL N A +F++ WN MI+G+ R+ K+ L+++M E D
Sbjct: 96 MISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERM----PERD 151
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRV----------LASGYCSNVFI---------RTN 158
+++ +LS A+ G + +V R+ L S Y N + R N
Sbjct: 152 VCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSREN 211
Query: 159 --LMNLYLMSGG---ECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
L++ + GG + + AR FD M R VVSWN+++ GY + G+ID A ++FDE
Sbjct: 212 WALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDES 271
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK 273
P +V +WT M+SG QN +A LF+ M ++V+ A L+ + +++ K
Sbjct: 272 PVHDVFTWTAMVSGYIQNRMVEEARELFDRMPER----NEVSWNAMLAGYVQGERVEMAK 327
Query: 274 WIHSYVEENFSVGREPVL-VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
E F V P VS N +I YA CG+I EA +F KM +R+ VSW +MI G
Sbjct: 328 -------ELFDV--MPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAG 378
Query: 333 FAKQGYAQEALLTFL---------------GVLSACS-----------HG---------- 356
+++ G++ EAL F+ LS C+ HG
Sbjct: 379 YSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETG 438
Query: 357 --------------GFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
G ++E F+ M I + M+ +SR G +EA
Sbjct: 439 CFVGNALLLMYCKCGSIEEANDLFKEM-----AGKDIVSWNTMIAGYSRHGFGEEALRFF 493
Query: 403 QNMP---MKPNDAVLGSLLLGC 421
++M +KP+DA + ++L C
Sbjct: 494 ESMKREGLKPDDATMVAVLSAC 515
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 158/361 (43%), Gaps = 70/361 (19%)
Query: 59 LAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDE 118
++ Y+ +G A +VF++ S+ +N MI G+ R+ E + L+ +M +++
Sbjct: 66 ISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDL---- 121
Query: 119 YTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLL 178
V V+ GY N +G AR L
Sbjct: 122 ---------------------VSWNVMIKGYVRNR-----------------NLGKAREL 143
Query: 179 FDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQAL 238
F+ MP R V SWN++L GY + G +D A ++FD MP +N VSW ++S QN K +A
Sbjct: 144 FERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEAC 203
Query: 239 SLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNAL 298
LF + ALV+ C G +K K + + + F + +VS N +
Sbjct: 204 VLFGSR-------ENWALVSW--NCLLGGFVKKKKIVEA--RQFFDSMKVRDVVSW-NTI 251
Query: 299 IHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-----------LTFL 347
I YA GEI+EA +F + + +WT+M++G+ + +EA +++
Sbjct: 252 ITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWN 311
Query: 348 GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM 407
+L+ G V+ ++ F+ M + + M+ +++ G + EA +L MP
Sbjct: 312 AMLAGYVQGERVEMAKELFDVMPCR-----NVSTWNTMITGYAQCGKISEAKNLFDKMPK 366
Query: 408 K 408
+
Sbjct: 367 R 367
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 52/102 (50%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H +++ G+ ++ LL Y G + A+ +F++ WN MI G++R
Sbjct: 425 QLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHG 484
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
E+++ ++ M + +PD+ T +LS C+ GL +G Q
Sbjct: 485 FGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 526
>gi|347954510|gb|AEP33755.1| chloroplast biogenesis 19, partial [Olimarabidopsis pumila]
Length = 475
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 172/454 (37%), Positives = 267/454 (58%), Gaps = 34/454 (7%)
Query: 86 WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVL 145
W I RS ++ + M EP T+ LLS CG F G + G +L
Sbjct: 14 WTSRITLLTRSAXLAEAAKEFADMRLAGVEPTHITFIALLS---GCGDFPSGSETLGDLL 70
Query: 146 ASGYC------SNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVK 199
C ++V + T ++ +Y G V ARL+FD M ++ V+WN+++ GY++
Sbjct: 71 HGYACKLGLDRNHVMVGTAILGMYSKRGR---VKKARLVFDYMDDKNSVTWNTMIDGYMR 127
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
G + A K+FD+MP +++SWT M++G + G +AL F EM+ + V D VA++AA
Sbjct: 128 SGQVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPDYVAIIAA 187
Query: 260 LSACAEIGDLKLGKWIHSYV-EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM 318
L+AC +G L LG W+H YV ++F V ++N+LI +Y CG +E A VF KM
Sbjct: 188 LNACTNLGALSLGLWVHRYVMSQDFKNN-----VRVSNSLIDLYCRCGCVEFAREVFDKM 242
Query: 319 QRRNTVSWTSMITGFAKQGYAQEALL---------------TFLGVLSACSHGGFVDEGR 363
++R VSW S+I GFA G A E+L+ TF G L+ACSH G VDEG
Sbjct: 243 EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPNAVTFTGALTACSHVGLVDEGL 302
Query: 364 QFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRI 423
+FF+ M +++ I PRIEHYGC+VDL+SRAG +++A +VQ+MPMKPN+ V+GSLL CR
Sbjct: 303 RFFQSMKRDYNISPRIEHYGCLVDLYSRAGRLEDALKVVQSMPMKPNEVVIGSLLAACRN 362
Query: 424 HNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPG 483
H N + ++ K +++++ + + Y+ L +N+YAA +W+ + +R+KM +G++K PG
Sbjct: 363 HGNNTVLAERLMKHLSDLNVKSHSNYVIL-SNMYAADAKWEGASRMRRKMKGLGLKKQPG 421
Query: 484 QSWVQINGVLHDFVAGDSTYKQASLIYKTLGEIT 517
S ++I+ H F+AGDS + + + I + L I+
Sbjct: 422 FSSIEIDDCTHVFMAGDSAHVETAYIREVLELIS 455
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 141/327 (43%), Gaps = 48/327 (14%)
Query: 41 SQIIINGFSQKNYIL-AKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
++++ + KN + ++ Y+ SG + NA K+F+K P W M+ G +
Sbjct: 103 ARLVFDYMDDKNSVTWNTMIDGYMRSGQVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFH 162
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
E+++ +++M +PD L+ C G G VH V++ + +NV + +L
Sbjct: 163 EEALVWFREMQISGVKPDYVAIIAALNACTNLGALSLGLWVHRYVMSQDFKNNVRVSNSL 222
Query: 160 MNLYLMSGGECGVGC---ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
++LY C GC AR +FD M R+VVSWNS++ G+
Sbjct: 223 IDLY------CRCGCVEFAREVFDKMEKRTVVSWNSVIVGF------------------- 257
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
A NG + ++L F +M+ + V AL+AC+ +G + G
Sbjct: 258 ------------AANGNAHESLVYFRKMQEEGFKPNAVTFTGALTACSHVGLVDEGLRFF 305
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAK 335
++ ++++ + L+ +Y+ G +E+A V + M + N V S++
Sbjct: 306 QSMKRDYNISPR---IEHYGCLVDLYSRAGRLEDALKVVQSMPMKPNEVVIGSLLAACRN 362
Query: 336 QG---YAQEALLTFLGVLSACSHGGFV 359
G E L+ L L+ SH +V
Sbjct: 363 HGNNTVLAERLMKHLSDLNVKSHSNYV 389
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 17/173 (9%)
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEI--GDLKLGKWI 275
+VSWT+ I+ ++ +A F +MR A V + +A LS C + G LG +
Sbjct: 11 IVSWTSRITLLTRSAXLAEAAKEFADMRLAGVEPTHITFIALLSGCGDFPSGSETLGDLL 70
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
H Y + + R V+V A++ MY+ G +++A VF M +N+V+W +MI G+ +
Sbjct: 71 HGYACK-LGLDRNHVMVG--TAILGMYSKRGRVKKARLVFDYMDDKNSVTWNTMIDGYMR 127
Query: 336 QGYAQEA-----------LLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
G A L+++ +++ GF +E +F M Q G+KP
Sbjct: 128 SGQVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFREM-QISGVKP 179
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H ++ F + L+ Y G + A +VF+K E + WN +I G A +
Sbjct: 203 VHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGN 262
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+S+ +++M ++ +P+ T++ L+ C+ GL EG
Sbjct: 263 AHESLVYFRKMQEEGFKPNAVTFTGALTACSHVGLVDEG 301
>gi|413956916|gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays]
Length = 537
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 179/525 (34%), Positives = 276/525 (52%), Gaps = 56/525 (10%)
Query: 16 KALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLL--AFYVTSGYLINAHK 73
K+ T RQ +L + + + + Q+H+ +++ GF + L +L+ + G +A
Sbjct: 4 KSGTQRQQPALWRRCRSLRQIKQVHALMVLQGFLSDSSALRELIFASAVGVRGGTAHARL 63
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETE-------PDEYTYSFLLS 126
VF++ +P ++N +IRG A S+ P +V +Y +M + PD+ T+ F+L
Sbjct: 64 VFDRIPHPDRFMYNTLIRGAAHSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPFVLR 123
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSG----------GEC------ 170
CA G G QVH V+ +G S+ F+R L+ ++ G GE
Sbjct: 124 ACAAMGAGETGAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEAREDAVA 183
Query: 171 ------------GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
+G AR LFD+ P + +VSWN ++ Y K GD+ A ++FD P R+V
Sbjct: 184 WSAMISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDV 243
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
VSW MISG + G +QA+ LF +M+ D V +++ LSACA+ GDL G+ +H +
Sbjct: 244 VSWNAMISGYVRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRLHGF 303
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ FS R +L NALI MYA CG + A VF MQ +N +W S+I G A G+
Sbjct: 304 LSGRFS--RIGPTTALGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGH 361
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
A E++ +TF+ VL+ACSHGG VD+G ++F M Q + I+P I+HYG
Sbjct: 362 ATESIAVFRKMLQGNVKPDEITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNIKHYG 421
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
CMVD+ SR GL+ EAF + M ++PN + +LL CRIH ELA ++L+
Sbjct: 422 CMVDMLSRGGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGEIELAEHANRELLKA--R 479
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
A+G L++N+YA+ W +R+ M GV K G++ +
Sbjct: 480 SDASGDFVLLSNIYASVGEWPGSENMRKLMDDSGVNKEAGRAVID 524
>gi|356559933|ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Glycine max]
Length = 512
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/494 (35%), Positives = 280/494 (56%), Gaps = 31/494 (6%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH + NG Q ++ KLL L AHKV + P+ ++N++I+ ++
Sbjct: 6 QIHGYTLRNGIDQTKILIEKLLEI----PNLHYAHKVLHHSPKPTLFLYNKLIQAYSSHP 61
Query: 98 TPEKSVY-LYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
+ + LY QM+ P+++T++FL S C G+ +H + SG+ ++F
Sbjct: 62 QHQHQCFSLYSQMLLHSFLPNQHTFNFLFSACTSLSSPSLGQMLHTHFIKSGFEPDLFAA 121
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
T L+++Y G + AR LFD MP R V +WN+++ G+ + GD+D A ++F MP R
Sbjct: 122 TALLDMYTKVGT---LELARKLFDQMPVRGVPTWNAMMAGHARFGDMDVALELFRLMPSR 178
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL-DQVALVAALSACAEIGDLKLGKWI 275
NVVSWTTMISG +++ K +AL LF M + + + + V L + A A +G L++G+ +
Sbjct: 179 NVVSWTTMISGYSRSKKYGEALGLFLRMEQEKGMMPNAVTLASIFPAFANLGALEIGQRV 238
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFA 334
+Y +N + ++NA++ MYA CG+I+ A+ VF ++ RN SW SMI G A
Sbjct: 239 EAYARKNGFFKN----LYVSNAVLEMYAKCGKIDVAWKVFNEIGSLRNLCSWNSMIMGLA 294
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
G + L +TF+G+L AC+HGG V++GR F+ M ++ I P++
Sbjct: 295 VHGECCKTLKLYDQMLGEGTSPDDVTFVGLLLACTHGGMVEKGRHIFKSMTTSFNIIPKL 354
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
EHYGCMVDL RAG + EA+ ++Q MPMKP+ + G+LL C H+N ELA A+ L A
Sbjct: 355 EHYGCMVDLLGRAGQLREAYEVIQRMPMKPDSVIWGALLGACSFHDNVELAEIAAESLFA 414
Query: 440 EIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG 499
++P Y+ L +N+YA+A +W VA +R+ M + K G S+++ G LH F+
Sbjct: 415 -LEPWNPGNYVIL-SNIYASAGQWDGVAKLRKVMKGSKITKSAGHSFIEEGGQLHKFIVE 472
Query: 500 DSTYKQASLIYKTL 513
D ++ +++ I+ L
Sbjct: 473 DRSHPESNEIFALL 486
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/495 (34%), Positives = 269/495 (54%), Gaps = 55/495 (11%)
Query: 38 QIHSQIIINGFSQKN-YILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
QIH++ I G N Y+ L+ Y G + + KVF++ + W +I+ ++
Sbjct: 131 QIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKA 190
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
++V + +M D D T +LS C+ G G++VH +IR
Sbjct: 191 GLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHS-----------YIR 239
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
+ DM A V N+LL Y+K D++ A+K+FDEMP +
Sbjct: 240 H---------------------YIDMKADVFVG-NALLDMYLKCDDLNSAYKVFDEMPVK 277
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
NVV+W MISG A G+ R+AL F M+ V D+V LV L++CA +G L++GKW+H
Sbjct: 278 NVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVH 337
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+Y+ N + + V NAL+ MYA CG I+EA+ VF M+RR+ S+T+MI G A
Sbjct: 338 AYMRRNHILADKFV----GNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALH 393
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G A A +TFLG+L ACSHGG V EG+++F M+ + ++P+ EH
Sbjct: 394 GEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEH 453
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YGCM+DL RAGL+ EA ++ M ++P+ G+LL CRIH N ++ V QKL E+
Sbjct: 454 YGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGACRIHGNVDIGESVMQKL-TEL 512
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
DP++ Y+ L+ N+Y++ RW+D +R+ M +RK PG S ++++GV+H+F GD
Sbjct: 513 DPDEEGTYI-LMTNLYSSVHRWKDALKIRKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDK 571
Query: 502 TYKQASLIYKTLGEI 516
++ ++ +I + I
Sbjct: 572 SHPRSKVIIANINLI 586
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 193/411 (46%), Gaps = 64/411 (15%)
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
FY+ S L ++H ++ N +IR +R+ + +M+ EPD +T
Sbjct: 58 FYIRSILLTHSHDA-----QFCLSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFT 112
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCS-NVFIRTNLMNLYLMSGGECGVGCARLLF 179
+L A REG+Q+H R + +G NV++ LM LY + G + + +F
Sbjct: 113 IPLVLKALALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCG---SIHDVQKVF 169
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
D+ P R +VSW +L++ + K G +A+
Sbjct: 170 DECPHRDLVSWTTLIQAFTKA-------------------------------GLYSRAVE 198
Query: 240 LFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
F EM R+ D LV LSAC+ +GDL LG+ +HSY+ + + V + NAL+
Sbjct: 199 AFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKAD---VFVGNALL 255
Query: 300 HMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF------------- 346
MY C ++ AY VF +M +N V+W +MI+G A QG +EAL TF
Sbjct: 256 DMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEV 315
Query: 347 --LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQN 404
+GVL++C++ G ++ G+ M +N + + ++D++++ G +DEAF + ++
Sbjct: 316 TLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVG-NALLDMYAKCGSIDEAFRVFES 374
Query: 405 MPMKPNDAV-LGSLLLGCRIHNNAELASQVAQKLV-AEIDPEQAAGYLALV 453
MK D +++ G +H A A QV ++ I+P + +L L+
Sbjct: 375 --MKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVT-FLGLL 422
>gi|226508188|ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea mays]
gi|219886289|gb|ACL53519.1| unknown [Zea mays]
Length = 537
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 179/525 (34%), Positives = 276/525 (52%), Gaps = 56/525 (10%)
Query: 16 KALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLL--AFYVTSGYLINAHK 73
K+ T RQ +L + + + + Q+H+ +++ GF + L +L+ + G +A
Sbjct: 4 KSGTQRQQPALWRRCRSLRQIKQVHALMVLQGFLSDSSALRELIFASAVGVRGGTAHARL 63
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETE-------PDEYTYSFLLS 126
VF++ +P ++N +IRG A S+ P +V +Y +M + PD+ T+ F+L
Sbjct: 64 VFDRIPHPDRFMYNTLIRGAAHSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPFVLR 123
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSG----------GEC------ 170
CA G G QVH V+ +G S+ F+R L+ ++ G GE
Sbjct: 124 ACAAMGAGETGAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEAREDAVA 183
Query: 171 ------------GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
+G AR LFD+ P + +VSWN ++ Y K GD+ A ++FD P R+V
Sbjct: 184 WSAMISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDV 243
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
VSW MISG + G +QA+ LF +M+ D V +++ LSACA+ GDL G+ +H +
Sbjct: 244 VSWNAMISGYVRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRLHGF 303
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ FS R +L NALI MYA CG + A VF MQ +N +W S+I G A G+
Sbjct: 304 LSGRFS--RIGPTTALGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGH 361
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
A E++ +TF+ VL+ACSHGG VD+G ++F M Q + I+P I+HYG
Sbjct: 362 ATESIAVFRKMLQGNVKPDEITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNIKHYG 421
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
CMVD+ SR GL+ EAF + M ++PN + +LL CRIH ELA ++L+
Sbjct: 422 CMVDMLSRGGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGEIELAEHANRELLKA--R 479
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
A+G L++N+YA+ W +R+ M GV K G++ +
Sbjct: 480 SDASGDFVLLSNIYASVGEWPGSENMRKLMDDSGVNKEAGRAVID 524
>gi|449468660|ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 697
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 168/496 (33%), Positives = 278/496 (56%), Gaps = 51/496 (10%)
Query: 75 FEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETE-PDEYTYSFLLSVCARCGL 133
F + ENP+ ++N MI+G P +++ Y M+++ P YT+S L+ C
Sbjct: 191 FTQMENPNVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCA 250
Query: 134 FREGEQVHGRVLASGYCSNVFIRTNLMNLY-------------------------LMSGG 168
G+ VH + G+ S++F++T L++ Y M
Sbjct: 251 VELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMVSA 310
Query: 169 ECGVG---CARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMI 225
VG AR LF++MP R+ +WN+++ GY + G+++ A +F++MP ++++SWTTMI
Sbjct: 311 LARVGDMDSARKLFEEMPERNTATWNTMIDGYARLGNVESAELLFNQMPTKDIISWTTMI 370
Query: 226 SGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSV 285
+ +QN + + AL++++EMR + D+V + SACA IG L+LGK IH YV S
Sbjct: 371 TCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYV---MSQ 427
Query: 286 GREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-- 343
G + V + +AL+ MYA CG ++ + +F K+ +N W ++I G A GYA++AL
Sbjct: 428 GLN-LDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRM 486
Query: 344 -------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFS 390
+TF+ +LSAC+H G VDEGR F M +++ I+P I HYGCMVD+ S
Sbjct: 487 FAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLS 546
Query: 391 RAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYL 450
++G ++EA L+++M +PN + G+LL GC++H N E+A ++L+ ++P +G+
Sbjct: 547 KSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMI-LEP-MNSGHY 604
Query: 451 ALVANVYAAAKRWQDVAAVRQKMIKMGV-RKPPGQSWVQINGVLHDFVAGDSTYKQASLI 509
L+ ++YA K W +VA +R M + GV +K PG SW+++ G +H F A ++ + I
Sbjct: 605 NLLVSMYAEEKDWMEVAHIRSMMKEKGVEKKYPGSSWIELEGTIHQFSASADSHPDSDKI 664
Query: 510 YKTLGEITMQAMQEGY 525
Y L E+ Q GY
Sbjct: 665 YFVLTELDGQLKLAGY 680
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 129/310 (41%), Gaps = 71/310 (22%)
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETE---------- 115
G + +A K+FE+ +TA WN MI G+AR E + L+ QM K+
Sbjct: 315 GDMDSARKLFEEMPERNTATWNTMIDGYARLGNVESAELLFNQMPTKDIISWTTMITCYS 374
Query: 116 ---------------------PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVF 154
PDE T S + S CA G G+++H V++ G +V+
Sbjct: 375 QNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVY 434
Query: 155 IRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
I + L+++Y +CG + + L+F + +++ WN++
Sbjct: 435 IGSALVDMY----AKCGSLDLSLLIFFKLTDKNLYCWNAV-------------------- 470
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK 273
I G A +G + +AL +F M R ++ + V ++ LSAC G + G+
Sbjct: 471 -----------IEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGR 519
Query: 274 WIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITG 332
+ ++ + + + ++ M + G + EA + + M+ N++ W +++ G
Sbjct: 520 SRFLSMTRDYDIRPD---IRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNG 576
Query: 333 FAKQGYAQEA 342
G + A
Sbjct: 577 CKLHGNCEIA 586
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH ++ G + YI + L+ Y G L + +F K + + WN +I G A
Sbjct: 419 EIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHG 478
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
EK++ ++ M ++ P+ T+ +LS C GL EG
Sbjct: 479 YAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEG 518
>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 573
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 170/480 (35%), Positives = 277/480 (57%), Gaps = 36/480 (7%)
Query: 85 IWNQMIRGHARS-ETPEK--SVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVH 141
+WN +IR + +P++ + +Y +M + PD +T+ FLL G++ H
Sbjct: 26 LWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTH 85
Query: 142 GRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKR 200
++L G + F+RT+L+N+Y CG + A+ +FDD ++ + +WNS++ Y K
Sbjct: 86 AQILLFGLDKDPFVRTSLLNMY----SSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKA 141
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR-----RARVGLDQVA 255
G ID A K+FDEMP RNV+SW+ +I+G GK ++AL LF EM+ A V ++
Sbjct: 142 GLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFT 201
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
+ LSAC +G L+ GKW+H+Y+++ + V + + L ALI MYA CG +E A VF
Sbjct: 202 MSTVLSACGRLGALEQGKWVHAYIDK-YHV---EIDIVLGTALIDMYAKCGSLERAKRVF 257
Query: 316 RKM-QRRNTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGF 358
+ +++ ++++MI A G E +TF+G+L AC H G
Sbjct: 258 NALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGL 317
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLL 418
++EG+ +F+ M + +GI P I+HYGCMVDL+ R+GL+ EA S + +MPM+P+ + GSLL
Sbjct: 318 INEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLL 377
Query: 419 LGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
G R+ + + ++L+ E+DP + Y+ L++NVYA RW +V +R +M G+
Sbjct: 378 SGSRMLGDIKTCEGALKRLI-ELDPMNSGAYV-LLSNVYAKTGRWMEVKCIRHEMEVKGI 435
Query: 479 RKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
K PG S+V++ GV+H+FV GD + +++ IY L EI + + GY D E+ L + E
Sbjct: 436 NKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNE 495
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 135/334 (40%), Gaps = 76/334 (22%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS- 96
+ H+QI++ G + ++ LL Y + G L +A +VF+ + + WN ++ +A++
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 97 ----------ETPEKSV---------YL----YKQMIDKETE------------PDEYTY 121
E PE++V Y+ YK+ +D E P+E+T
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDD 181
S +LS C R G +G+ VH Y + +
Sbjct: 203 STVLSACGRLGALEQGKWVH------AYIDKYHVEID----------------------- 233
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM-PHRNVVSWTTMISGCAQNGKSRQALSL 240
+V +L+ Y K G ++ A ++F+ + ++V +++ MI A G + + L
Sbjct: 234 -----IVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQL 288
Query: 241 FNEMRRA-RVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
F+EM + + + V V L AC G + GK + E F + + ++
Sbjct: 289 FSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPS---IQHYGCMV 345
Query: 300 HMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITG 332
+Y G I+EA M + + W S+++G
Sbjct: 346 DLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 179/520 (34%), Positives = 285/520 (54%), Gaps = 28/520 (5%)
Query: 38 QIHSQIIINGFS--QKNYILAKLLAFYVTSGYLINAHKVFEKT--ENPSTAIWNQMIRGH 93
++H+ II G + + ++ LL FY + G A KVF++ + T W ++
Sbjct: 34 RLHATIITTGIAGAPETFLHNALLQFYASCGCAWQARKVFDEIPHSHKDTVDWTTLMGCF 93
Query: 94 ARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNV 153
R ++++ ++ +M +PDE T L CAR G G Q HG ++ G
Sbjct: 94 VRHNVSDEALLIFVEMRRCGVKPDEVTLVCLFGGCARLGDVVVGAQGHGCMVKMGLGGVE 153
Query: 154 FIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
+M++Y SG +G AR +F +M +SVVSW +L G ++ + +FDEM
Sbjct: 154 KACNAVMDMYAKSGL---MGEARRVFYEMKGQSVVSWTVILDGVIRSEGVRNGRVVFDEM 210
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEM-RRARVGLDQVALVAALSACAEIGDLKLG 272
P RN V+WT MI+G +G ++++ +L EM + L+ V L + L+AC++ GDL +G
Sbjct: 211 PERNEVAWTIMIAGYLDSGLTQESFALVREMIFDLEMELNYVTLCSILTACSQSGDLMMG 270
Query: 273 KWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
+W+H+Y + + + + A++ MYA CG I A+ F+KM +RN VSW +M++G
Sbjct: 271 RWVHAYA---LKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQRNVVSWNAMLSG 327
Query: 333 FAKQGYAQEAL--------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
A G + AL +TF VLSACSH G VD+G +F + +GI P+
Sbjct: 328 LAMHGLGRAALDIFPQMFKEAKPDDVTFTSVLSACSHSGLVDQGCFYFGNLESVYGITPK 387
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
+EHY CMVDL RAG ++EA LV+ MP++PN+ VLGSLL C IH +L + Q+LV
Sbjct: 388 VEHYACMVDLLGRAGRLEEAEILVREMPIRPNEVVLGSLLGSCSIHGKLQLGEHLLQELV 447
Query: 439 AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVA 498
++DP Q Y L++N+YA A + ++RQ + K G++K PG S + + G +H F A
Sbjct: 448 -QLDP-QNTEYHILLSNMYALAGKQNRANSLRQVLKKRGIKKVPGMSSIHVGGQVHQFSA 505
Query: 499 GDSTYKQASLIYKTLGEITMQAMQEGYKPDIS-ELFLGIE 537
GD ++ + +Y L E+ + GY P+ + + F G +
Sbjct: 506 GDKSHPRTREVYNMLDEMIPRLRLAGYAPNTALQTFAGCD 545
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 141/377 (37%), Gaps = 92/377 (24%)
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCS--NVFIRTNLMNLYLMSGGECGVGC-ARL 177
Y FLL CAR GE++H ++ +G F+ L+ Y CG AR
Sbjct: 16 YRFLLRSCARESSLDIGERLHATIITTGIAGAPETFLHNALLQFY----ASCGCAWQARK 71
Query: 178 LFDDMP--ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
+FD++P + V W +L+ +V+ D A IF
Sbjct: 72 VFDEIPHSHKDTVDWTTLMGCFVRHNVSDEALLIF------------------------- 106
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
EMRR V D+V LV CA +GD+ +G H + + G E
Sbjct: 107 ------VEMRRCGVKPDEVTLVCLFGGCARLGDVVVGAQGHGCMVKMGLGGVEKAC---- 156
Query: 296 NALIHMYASCGEIEEAYGVFRKMQ-------------------------------RRNTV 324
NA++ MYA G + EA VF +M+ RN V
Sbjct: 157 NAVMDMYAKSGLMGEARRVFYEMKGQSVVSWTVILDGVIRSEGVRNGRVVFDEMPERNEV 216
Query: 325 SWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFEC 368
+WT MI G+ G QE+ +T +L+ACS G + GR
Sbjct: 217 AWTIMIAGYLDSGLTQESFALVREMIFDLEMELNYVTLCSILTACSQSGDLMMGRWVHAY 276
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAE 428
+ + I MVD++++ G + AF + MP + N ++L G +H
Sbjct: 277 ALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQR-NVVSWNAMLSGLAMHGLGR 335
Query: 429 LASQVAQKLVAEIDPEQ 445
A + ++ E P+
Sbjct: 336 AALDIFPQMFKEAKPDD 352
>gi|449454143|ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
gi|449490933|ref|XP_004158752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
Length = 484
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 167/485 (34%), Positives = 274/485 (56%), Gaps = 33/485 (6%)
Query: 21 RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTEN 80
R+I LL + L QIH+ + +G Q N ILA ++ + + A ++F ++ N
Sbjct: 10 RRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYADRLFSQSHN 69
Query: 81 PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
P+ ++N +I+ H+ S +S+ L+ M + PD+YT++ LL CA + G+ V
Sbjct: 70 PNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANLCEYSLGQCV 129
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL-----LFDDMPARSVVSWNSLLK 195
V G+ IR ++ LY V C ++ +FD+M R VV WN +++
Sbjct: 130 ISEVFRRGFYCFGSIRIGVVELY--------VCCEKMEDAWKMFDEMSHRDVVVWNLMIR 181
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVA 255
G+ K G++D +F +M R++VSW T+IS AQN + +AL LF +M D+V
Sbjct: 182 GFCKTGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVT 241
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
+V L C+ +G L++G+ IHSY S G + ++ N+LI Y CG IE+AY +F
Sbjct: 242 VVTMLPVCSRLGALEVGQRIHSYAS---SKGNLVGITTVGNSLIDFYCKCGNIEKAYNIF 298
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVD 360
+KM ++ VSW ++I GFA G + A+ TF+ VL+AC H G ++
Sbjct: 299 QKMTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLE 358
Query: 361 EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
+GR+ F M +++ I+P++EH+GCMVDL R G ++EA L+++MPM+PN + G++L
Sbjct: 359 KGRELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGA 418
Query: 421 CRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRK 480
CR H N +LA ++L++ ++P + Y+ L++N+ A RW++V VRQ M + V+K
Sbjct: 419 CRTHGNLKLAEMAVKELIS-LEPWNSGNYV-LLSNMLAEEGRWEEVENVRQWMREKSVKK 476
Query: 481 PPGQS 485
PGQS
Sbjct: 477 APGQS 481
>gi|347954492|gb|AEP33746.1| chloroplast biogenesis 19, partial [Barbarea verna]
Length = 494
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 172/469 (36%), Positives = 276/469 (58%), Gaps = 28/469 (5%)
Query: 75 FEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLF 134
++ + +T W I +R+ ++ + M EP+ T+ LLS C
Sbjct: 22 LNQSTSETTVSWTSRITLLSRNGRLAEAAKEFSSMRLAGVEPNHITFIALLSGCGDVSSG 81
Query: 135 RE--GEQVHGRVLASGYC-SNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWN 191
E G+ +HG G ++V + T ++ +Y G G ARL+FD M ++ V+WN
Sbjct: 82 SEALGDLLHGYACKLGLDRTHVMVGTAILGMYSKRGR---FGKARLVFDFMEDKNSVTWN 138
Query: 192 SLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL 251
+++ GY++ G ++ A K+FDEMP R+++SWT MI+G + G +AL+ F EM+ + V
Sbjct: 139 TMIDGYMRSGQVNNAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKP 198
Query: 252 DQVALVAALSACAEIGDLKLGKWIHSYV-EENFSVGREPVLVSLNNALIHMYASCGEIEE 310
D VA++AAL+AC +G L G W+H YV ++F + ++N+LI +Y CG +E
Sbjct: 199 DYVAIIAALAACTHLGALSFGLWVHRYVMNQDFKNN-----IRVSNSLIDLYCRCGCVEF 253
Query: 311 AYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALL---------------TFLGVLSACSH 355
A VF KM++R VSW S+I GFA G A E+L+ TF G L+ACSH
Sbjct: 254 AREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSH 313
Query: 356 GGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLG 415
G V+EG ++F+ M ++ I PRIEHYGC+VDL+SRAG +++A ++VQ+MPMKPN+ V+G
Sbjct: 314 VGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEDALNVVQSMPMKPNEVVIG 373
Query: 416 SLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIK 475
SLL CR H N + ++ K +++++ + + Y+ L +N+YAA W+ + +R+KM
Sbjct: 374 SLLAACRNHGNNTVLAERLVKHLSDLNVKSHSNYVIL-SNMYAADGIWEGASKMRRKMKG 432
Query: 476 MGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEG 524
+G++K PG S V+I+ H F+AGDS + + + I + L I+ +G
Sbjct: 433 LGLKKQPGFSSVEIDDCTHVFMAGDSAHVETAYIREVLELISSDLRLQG 481
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 132/340 (38%), Gaps = 78/340 (22%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKE---- 113
+L Y G A VF+ E+ ++ WN MI G+ RS +V L+ +M +++
Sbjct: 109 ILGMYSKRGRFGKARLVFDFMEDKNSVTWNTMIDGYMRSGQVNNAVKLFDEMPERDLISW 168
Query: 114 ---------------------------TEPDEYTYSFLLSVCARCGLFREGEQVHGRVLA 146
+PD L+ C G G VH V+
Sbjct: 169 TAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALAACTHLGALSFGLWVHRYVMN 228
Query: 147 SGYCSNVFIRTNLMNLYLMSGGECGVGC---ARLLFDDMPARSVVSWNSLLKGYVKRGDI 203
+ +N+ + +L++LY C GC AR +FD M R+VVSWNS++ G+
Sbjct: 229 QDFKNNIRVSNSLIDLY------CRCGCVEFAREVFDKMEKRTVVSWNSVIVGF------ 276
Query: 204 DGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSAC 263
A NG + ++L F +M+ D V AL+AC
Sbjct: 277 -------------------------AANGNAHESLVYFRKMQEEGFKPDAVTFTGALTAC 311
Query: 264 AEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRN 322
+ +G ++ G ++ + + + L+ +Y+ G +E+A V + M + N
Sbjct: 312 SHVGLVEEGLRYFQTMKRDHRISPR---IEHYGCLVDLYSRAGRLEDALNVVQSMPMKPN 368
Query: 323 TVSWTSMITGFAKQG---YAQEALLTFLGVLSACSHGGFV 359
V S++ G E L+ L L+ SH +V
Sbjct: 369 EVVIGSLLAACRNHGNNTVLAERLVKHLSDLNVKSHSNYV 408
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H ++ F + L+ Y G + A +VF+K E + WN +I G A +
Sbjct: 222 VHRYVMNQDFKNNIRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGN 281
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+S+ +++M ++ +PD T++ L+ C+ GL EG
Sbjct: 282 AHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEG 320
>gi|347954504|gb|AEP33752.1| chloroplast biogenesis 19, partial [Lobularia maritima]
Length = 496
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 174/466 (37%), Positives = 271/466 (58%), Gaps = 36/466 (7%)
Query: 80 NPSTAI-WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE 138
N ST I W I +R+ ++ + M EP+ T+ LLS CG F G
Sbjct: 28 NLSTTISWTSRITLLSRNGRLAEAAKEFSDMRFAGVEPNHITFIALLS---GCGDFSSGS 84
Query: 139 QVHGRVLASGYC------SNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNS 192
+ G +L C ++V + T ++ +Y G V ARL+FD M ++ ++WN+
Sbjct: 85 ESFGDLLHGYACKLGLDRNHVMVGTAIIGMYSKHGR---VSKARLVFDHMEGKNSMTWNT 141
Query: 193 LLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLD 252
++ GY+++G ID A+K+FDEMP R ++SWT MI+G + G +AL F EM+ + V D
Sbjct: 142 MIDGYMRKGKIDDAYKLFDEMPERGLISWTAMINGFVKKGFHEEALVWFREMQSSGVEPD 201
Query: 253 QVALVAALSACAEIGDLKLGKWIHSY-VEENFSVGREPVLVSLNNALIHMYASCGEIEEA 311
VA++A L+AC +G L G W+H Y V +F V +NN+ I ++ CG +E A
Sbjct: 202 YVAIIAVLAACTNLGALSFGLWVHRYLVSRDFRNN-----VRVNNSSIDLHCRCGCVELA 256
Query: 312 YGVFRKMQRRNTVSWTSMITGFAKQGYAQEALL---------------TFLGVLSACSHG 356
VF M++R VSW S+I F+ G+A E+L+ TF G L+ACSH
Sbjct: 257 QPVFDHMEKRTVVSWNSVIVVFSANGHADESLVYFRRMQEEGFKPNAVTFTGALTACSHV 316
Query: 357 GFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGS 416
G V+EG ++F+ M + + I PRIEHYGC+VDL+SRAG +++A ++VQ+MPMKPN+ V+GS
Sbjct: 317 GLVEEGLRYFQTMKKEYRISPRIEHYGCLVDLYSRAGRLEDALNVVQSMPMKPNEVVIGS 376
Query: 417 LLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKM 476
LL CR H N + ++ K +++ + + + Y+ L +N+YAA +W+ + +R+KM +
Sbjct: 377 LLAACRTHGNNTVLAERLMKHLSDTNVKSHSNYVIL-SNMYAADGKWEGASKMRRKMKGL 435
Query: 477 GVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQ 522
G++K PG S ++I+ H F+AGDS + + I + L EI MQ
Sbjct: 436 GLKKQPGFSSIEIDDCTHVFMAGDSAHVETGYIREVL-EILSSDMQ 480
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 13/192 (6%)
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
Y+ G + +A+K+F++ W MI G + E+++ +++M EPD
Sbjct: 146 YMRKGKIDDAYKLFDEMPERGLISWTAMINGFVKKGFHEEALVWFREMQSSGVEPDYVAI 205
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL---L 178
+L+ C G G VH +++ + +NV + + ++L+ C GC L +
Sbjct: 206 IAVLAACTNLGALSFGLWVHRYLVSRDFRNNVRVNNSSIDLH------CRCGCVELAQPV 259
Query: 179 FDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR----NVVSWTTMISGCAQNGKS 234
FD M R+VVSWNS++ + G D + F M N V++T ++ C+ G
Sbjct: 260 FDHMEKRTVVSWNSVIVVFSANGHADESLVYFRRMQEEGFKPNAVTFTGALTACSHVGLV 319
Query: 235 RQALSLFNEMRR 246
+ L F M++
Sbjct: 320 EEGLRYFQTMKK 331
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/99 (20%), Positives = 46/99 (46%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H ++ F + + + G + A VF+ E + WN +I + +
Sbjct: 224 VHRYLVSRDFRNNVRVNNSSIDLHCRCGCVELAQPVFDHMEKRTVVSWNSVIVVFSANGH 283
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
++S+ +++M ++ +P+ T++ L+ C+ GL EG
Sbjct: 284 ADESLVYFRRMQEEGFKPNAVTFTGALTACSHVGLVEEG 322
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 180/538 (33%), Positives = 275/538 (51%), Gaps = 81/538 (15%)
Query: 70 NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
NAHKVF++ P+ +IWN M RG++++E+ + + L++QM + P+ +T+ +L C
Sbjct: 3 NAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKSCV 62
Query: 130 RCGLFRE----------------------------------------GEQVHGRVLA--- 146
+ +E GE + V+A
Sbjct: 63 KINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTA 122
Query: 147 --SGY--CSNVFIRTNLMNL----------YLMSG--GECGVGCARLLFDDMPARSVVSW 190
+GY C ++ L +L ++SG V AR LFD MP + V+SW
Sbjct: 123 MINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKDVMSW 182
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR-RARV 249
N++L GY GD+ ++F+EMP RNV SW +I G +NG + LS F M V
Sbjct: 183 NTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTV 242
Query: 250 GLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIE 309
+ LV LSACA +G L LGKW+H Y E + G V + NAL+ MYA CG +E
Sbjct: 243 VPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGN----VYVRNALMDMYAKCGVVE 298
Query: 310 EAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACS 354
A VF+ M ++ +SW ++I G A G+ +AL +TF+G+L AC+
Sbjct: 299 TALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACT 358
Query: 355 HGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL 414
H G V++G +F+ M ++ I PRIEHYGC+VDL RAGL+ A ++ MP++ + +
Sbjct: 359 HMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIW 418
Query: 415 GSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMI 474
+LL CR++ N ELA +KL+ E +P+ A Y+ L +N+Y RW+DVA ++ M
Sbjct: 419 AALLGACRVYKNVELAELALEKLI-EFEPKNPANYVML-SNIYGDFGRWKDVARLKVAMR 476
Query: 475 KMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISEL 532
G +K PG S +++N L +F + D + + IY TL +T GY P + EL
Sbjct: 477 DTGFKKLPGCSLIEVNDYLVEFYSLDERHPEKEQIYGTLRTLTKLLRSSGYVPGLMEL 534
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 4/131 (3%)
Query: 203 IDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSA 262
++ A K+FD++P N W M G +QN + + LF +M+ V + L +
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 263 CAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRN 322
C +I LK G+ +H +V ++ P + + LI MYAS G I AY VF +M RN
Sbjct: 61 CVKINALKEGEEVHCFVIKS-GFRANPFVAT---TLIDMYASGGAIHAAYRVFGEMIERN 116
Query: 323 TVSWTSMITGF 333
++WT+MI G+
Sbjct: 117 VIAWTAMINGY 127
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 51/137 (37%), Gaps = 6/137 (4%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
MLV+ + N AT L+ L + + H G+ Y+ L+
Sbjct: 236 MLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESH------GYKGNVYVRNALMD 289
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y G + A VF+ +N WN +I G A ++ L+ M PD T
Sbjct: 290 MYAKCGVVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGIT 349
Query: 121 YSFLLSVCARCGLFREG 137
+ +L C GL +G
Sbjct: 350 FIGILCACTHMGLVEDG 366
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 190/560 (33%), Positives = 299/560 (53%), Gaps = 63/560 (11%)
Query: 22 QIFSLLQIRNTTKTLFQIHSQII-INGFSQKNYILAKLLAFYVTSGYLIN----AHKVFE 76
L+ N+T L QIH Q+ N FS ++++ +++S +N A +F+
Sbjct: 44 HFIDLIHASNSTHKLRQIHGQLYRCNVFSS-----SRVVTQFISSCSSLNSVDYAISIFQ 98
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
+ E ++ ++N +IRG A + E S+ + M+ + PD T+ F+L A
Sbjct: 99 RFELKNSYLFNALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGV 158
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYL-----------------------------MSG 167
G +H +L G + F+R +L+++Y+ +
Sbjct: 159 GRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIH 218
Query: 168 GECGVG---CARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTM 224
G C +G A LFD MP + SWNSL+ G++K GD+ A ++F +MP +NVVSWTTM
Sbjct: 219 GYCRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTM 278
Query: 225 ISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFS 284
++G +QNG +AL F M + +V+ALSACA+IG L G IH+Y+ N
Sbjct: 279 VNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGN-- 336
Query: 285 VGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL- 343
G + LV + AL+ MYA CG IE A VF + + + + W+ MI G+A G+ ++AL
Sbjct: 337 -GFKLNLV-IGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQ 394
Query: 344 --------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLF 389
+ FL VL+ACSH G V+EG +FF+ M + + I+P ++HY +VD+
Sbjct: 395 YFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDML 454
Query: 390 SRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGY 449
RAG +DEA ++ MP+ P+ V G+L CR H N E+A ++KL+ +++P+ Y
Sbjct: 455 GRAGRLDEALKFIRAMPITPDFVVWGALFCACRTHKNVEMAELASKKLL-QLEPKHPGSY 513
Query: 450 LALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLI 509
+ L +N YA+ RW D VR M G K PG S+++++ LH FVAGD+T+ +A I
Sbjct: 514 VFL-SNAYASVGRWDDAERVRVSMRDHGAHKDPGWSFIEVDHKLHRFVAGDNTHNRAVEI 572
Query: 510 YKTLGEITMQAMQEGYKPDI 529
Y L EI+ A ++GY +I
Sbjct: 573 YSKLDEISASAREKGYTKEI 592
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 177/538 (32%), Positives = 285/538 (52%), Gaps = 77/538 (14%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIR------ 91
+IH + NG +++ L+ Y G L++A +F+K W+ MIR
Sbjct: 130 EIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLF 189
Query: 92 ----------------GHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFR 135
G+ R E+ L+ +MI++ P++ T L+ C G +
Sbjct: 190 YGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQ 249
Query: 136 EGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLK 195
G+++H +L +G+ ++ + T L+++Y G+CG
Sbjct: 250 LGKRLHAYILRNGFGMSLALATALVDMY----GKCG------------------------ 281
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVA 255
+I A IFD M +++V++WT MIS AQ A LF +MR V +++
Sbjct: 282 ------EIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELT 335
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
+V+ LS CA G L +GKW H+Y+++ G E V V L ALI MYA CG+I A +F
Sbjct: 336 MVSLLSLCAVNGALDMGKWFHAYIDKQ---GVE-VDVILKTALIDMYAKCGDISGAQRLF 391
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVD 360
+ R+ +W M+ G+ GY ++AL +TF+G L ACSH G V
Sbjct: 392 SEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVV 451
Query: 361 EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
EG+ FE M ++G+ P++EHYGCMVDL RAGL+DEA+ ++++MP+ PN A+ G++L
Sbjct: 452 EGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAA 511
Query: 421 CRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRK 480
C+IH N+ + A++L+A ++P Q GY L++N+YAAA RW DVA +R+ + G++K
Sbjct: 512 CKIHKNSNMGELAARELLA-LEP-QNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKK 569
Query: 481 PPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
PG S +++NG++HDF GD+ + I + L E++ + + GY PD S + I+E
Sbjct: 570 EPGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDE 627
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 159/312 (50%), Gaps = 36/312 (11%)
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
P ++ Y M + E D + +L C++ + R G+++HG + +G S+VF+
Sbjct: 90 PRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNA 149
Query: 159 LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
LM +Y ECG + ARLLFD M R VVSW+++++ Y+ +F R+
Sbjct: 150 LMQMY----SECGSLVSARLLFDKMSERDVVSWSTMIRAYI---------TLFYGFSQRS 196
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+VSWT MI+G + + LF M V + + +++ + +C +G ++LGK +H+
Sbjct: 197 IVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHA 256
Query: 278 YVEEN-FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
Y+ N F + ++L AL+ MY CGEI A +F M+ ++ ++WT+MI+ +A+
Sbjct: 257 YILRNGFGMS-----LALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQA 311
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
A LT + +LS C+ G +D G+ F +++ G++ +
Sbjct: 312 NCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQ-GVEVDVIL 370
Query: 382 YGCMVDLFSRAG 393
++D++++ G
Sbjct: 371 KTALIDMYAKCG 382
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 41/212 (19%), Positives = 79/212 (37%), Gaps = 34/212 (16%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEK 77
LT + SL + H+ I G + L+ Y G + A ++F +
Sbjct: 334 LTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSE 393
Query: 78 TENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+ WN M+ G+ EK++ L+ +M +P++ T+ L C+ GL EG
Sbjct: 394 AIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEG 453
Query: 138 EQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGY 197
+ + +++ F +P V + ++
Sbjct: 454 KGLFEKMIHD-------------------------------FGLVP--KVEHYGCMVDLL 480
Query: 198 VKRGDIDGAWKIFDEMP-HRNVVSWTTMISGC 228
+ G +D A+K+ + MP N+ W M++ C
Sbjct: 481 GRAGLLDEAYKMIESMPVTPNIAIWGAMLAAC 512
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 173/517 (33%), Positives = 274/517 (52%), Gaps = 59/517 (11%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
IHS + GF ++ ++ FY G+L +A KVF+ + W MI G
Sbjct: 126 IHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGK 185
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
++V L++ +++ PD + +L CAR G G + + G NVF+ T+
Sbjct: 186 FREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATS 245
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
L+++Y K G ++ A +FD M +++
Sbjct: 246 LVDMY----------------------------------TKCGSMEEARFVFDGMVEKDI 271
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
V W+ MI G A NG R+A+ LF EMR+ V D A+V ALS+CA +G L+LG W
Sbjct: 272 VCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGL 331
Query: 279 V--EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+ EE S PVL +LI YA CG +EEA GV++ M+ ++ V + ++I+G A
Sbjct: 332 MNYEEFLS---NPVL---GTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMY 385
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G A TF+G+L C+H G VD+GR +F M+ ++ + P IEH
Sbjct: 386 GQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEH 445
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YGCMVDL +RAG +DEA +L++ MPMK N V GSLL GCR+H +LA V ++L+ E+
Sbjct: 446 YGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLI-EL 504
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+P +G+ L++N+Y+A++RW + +R + + G++K PG SWV+++GV+H+F+ GD+
Sbjct: 505 EPWN-SGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLVGDT 563
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++ + IY+ L + + GY P + +EE
Sbjct: 564 SHPLSQKIYEKLESLFKDLKEAGYNPTTEFVLFDVEE 600
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 172/496 (34%), Positives = 277/496 (55%), Gaps = 32/496 (6%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
L+ YV L +A ++F++ WN MI G+A+ ++ +++ ++ D
Sbjct: 194 LMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQA----RRLFEESPVRD 249
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
+T++ ++ + G+ E +V + S + M G R
Sbjct: 250 VFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMG-------RE 302
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
LF++MP ++ SWN ++ GY + GD+ A +FD MP R+ VSW +I+G AQNG +A
Sbjct: 303 LFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEA 362
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
+++ EM+R L++ ALSACA+I L+LGK +H V G E + + NA
Sbjct: 363 MNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQV---VRTGYEKGCL-VGNA 418
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------------- 343
L+ MY CG I+EAY VF+ +Q ++ VSW +M+ G+A+ G+ ++AL
Sbjct: 419 LVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPD 478
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
+T +GVLSACSH G D G ++F MN+++GI P +HY CM+DL RAG ++EA +L+
Sbjct: 479 EITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLI 538
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKR 462
+NMP +P+ A G+LL RIH N EL Q A+ +V +++P + Y+ L++N+YAA+ R
Sbjct: 539 RNMPFEPDAATWGALLGASRIHGNMELGEQAAE-MVFKMEPHNSGMYV-LLSNLYAASGR 596
Query: 463 WQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQ 522
W DV+ +R KM ++GV+K PG SWV++ +H F GD + + IY L E+ ++
Sbjct: 597 WVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEELDLKMKH 656
Query: 523 EGYKPDISELFLGIEE 538
EGY + +EE
Sbjct: 657 EGYVSSTKLVLHDVEE 672
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 197/433 (45%), Gaps = 73/433 (16%)
Query: 63 VTSGYLINA-----HKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
+ SGYL NA +F+K + WN M+ G+AR+ + L+ M +K D
Sbjct: 70 MISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMPEK----D 125
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCS-----NVFIRT--------------- 157
+++ +LS R G E V R+ S ++R+
Sbjct: 126 VVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLFESKSD 185
Query: 158 -NLMNLYLMSGGECG---VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
L++ + GG +G AR LFD +P R ++SWN+++ GY + GD+ A ++F+E
Sbjct: 186 WELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEES 245
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK 273
P R+V +WT M+ Q+G +A +F+EM + R +++ ++ A+ + +G+
Sbjct: 246 PVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKR----EMSYNVMIAGYAQYKRMDMGR 301
Query: 274 WIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF 333
E F P + S N +I Y G++ +A +F M +R++VSW ++I G+
Sbjct: 302 -------ELFEEMPFPNIGSW-NIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGY 353
Query: 334 AKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
A+ G +EA+ TF LSAC+ ++ G+Q ++
Sbjct: 354 AQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQV-----HGQVVRTG 408
Query: 379 IEHYGC-----MVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQV 433
E GC +V ++ + G +DEA+ + Q + K + ++L G H A V
Sbjct: 409 YEK-GCLVGNALVGMYCKCGCIDEAYDVFQGVQHK-DIVSWNTMLAGYARHGFGRQALTV 466
Query: 434 AQKLV-AEIDPEQ 445
+ ++ A + P++
Sbjct: 467 FESMITAGVKPDE 479
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 143/325 (44%), Gaps = 52/325 (16%)
Query: 165 MSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTM 224
M G C + A +FD MP R+ VS+N+++ GY++ A +FD+MPH+++ SW M
Sbjct: 44 MRNGHCDL--ALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLM 101
Query: 225 ISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFS 284
++G A+N + R A LF+ M D V+ A LS G + + + + S
Sbjct: 102 LTGYARNRRLRDARMLFDSMPEK----DVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNS 157
Query: 285 VGREPVLVSL-----------------------NNALIHMYASCGEIEEAYGVFRKMQRR 321
+ +L + N L+ Y + +A +F ++ R
Sbjct: 158 ISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVR 217
Query: 322 NTVSWTSMITGFAKQGYAQEA-----------LLTFLGVLSACSHGGFVDEGRQFFECMN 370
+ +SW +MI+G+A+ G +A + T+ ++ A G +DE R+ F+ M
Sbjct: 218 DLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMP 277
Query: 371 QNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG-CRIHNNAEL 429
Q R Y M+ +++ MD L + MP PN ++ G C+ N +L
Sbjct: 278 QK-----REMSYNVMIAGYAQYKRMDMGRELFEEMPF-PNIGSWNIMISGYCQ---NGDL 328
Query: 430 ASQVAQKLVAEIDPEQAAGYLALVA 454
A A+ L + + + A++A
Sbjct: 329 AQ--ARNLFDMMPQRDSVSWAAIIA 351
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 28/223 (12%)
Query: 197 YVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVAL 256
+++ G D A +FD MP RN VS+ MISG +N K A LF++M D +
Sbjct: 43 HMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHK----DLFSW 98
Query: 257 VAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFR 316
L+ A L+ + + F E +VS NA++ Y G ++EA VF
Sbjct: 99 NLMLTGYARNRRLRDARML-------FDSMPEKDVVSW-NAMLSGYVRSGHVDEARDVFD 150
Query: 317 KMQRRNTVSWTSMITGFAKQGYAQEALLTFLG------VLSACSHGGFVD-----EGRQF 365
+M +N++SW ++ + + G +EA F + C GG+V + RQ
Sbjct: 151 RMPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQL 210
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
F+ + ++ I + M+ +++ G + +A L + P++
Sbjct: 211 FDQI----PVRDLIS-WNTMISGYAQDGDLSQARRLFEESPVR 248
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 9/184 (4%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H Q++ G+ + + L+ Y G + A+ VF+ ++ WN M+ G+AR
Sbjct: 399 QVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHG 458
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG-EQVHGRVLASGYCSNVFIR 156
+++ +++ MI +PDE T +LS C+ GL G E H G N
Sbjct: 459 FGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHY 518
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPAR-SVVSWNSLLKGYVKRGDID----GAWKIFD 211
+++L +G C + A+ L +MP +W +LL G+++ A +F
Sbjct: 519 ACMIDLLGRAG--C-LEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFK 575
Query: 212 EMPH 215
PH
Sbjct: 576 MEPH 579
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 172/483 (35%), Positives = 285/483 (59%), Gaps = 37/483 (7%)
Query: 80 NPSTAIWNQMIRGHARS--ETP--EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFR 135
N + +WN +IR RS + P ++ LY +M PD +T+ FLL
Sbjct: 21 NIESFVWNNLIRASTRSRVQNPAFPPALSLYLRMRLHAVLPDLHTFPFLLQ---SINTPH 77
Query: 136 EGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGC-ARLLFDDMPARSVVSWNSLL 194
G Q+H ++L G ++ F++T+L+N+Y CG AR FD++ + SWN+++
Sbjct: 78 RGRQLHAQILLLGLANDPFVQTSLINMY----SSCGTPTFARQAFDEITQPDLPSWNAII 133
Query: 195 KGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR---ARVGL 251
K G I A K+FD+MP +NV+SW+ MI G G+ + ALSLF ++ +++
Sbjct: 134 HANAKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRP 193
Query: 252 DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEA 311
++ + + LSACA +G L+ GKW+H+Y+++ G + + V L +LI MYA CG IE A
Sbjct: 194 NEFTMSSVLSACARLGALQHGKWVHAYIDKT---GMK-IDVVLGTSLIDMYAKCGSIERA 249
Query: 312 YGVFRKM-QRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSH 355
+F + ++ ++W++MIT F+ G ++E L +TF+ VL AC H
Sbjct: 250 KCIFDNLGPEKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACVH 309
Query: 356 GGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLG 415
GG V EG ++F+ M +G+ P I+HYGCMVDL+SRAG +++A+++V++MPM+P+ + G
Sbjct: 310 GGLVSEGNEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWG 369
Query: 416 SLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIK 475
+LL G RIH + E KL+ E+DP ++ Y+ L++NVYA RW++V +R M
Sbjct: 370 ALLNGARIHGDVETCEIAITKLL-ELDPANSSAYV-LLSNVYAKLGRWREVRHLRDLMEV 427
Query: 476 MGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLG 535
G++K PG S V+++GV+ +F AGD+++ + +Y L EI + + GY+ + E+ L
Sbjct: 428 RGIKKLPGCSLVEVDGVIREFFAGDNSHPELLNLYVMLDEIMKRLEKHGYERNTGEVLLD 487
Query: 536 IEE 538
++E
Sbjct: 488 LDE 490
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 146/349 (41%), Gaps = 75/349 (21%)
Query: 26 LLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI 85
LLQ NT Q+H+QI++ G + ++ L+ Y + G A + F++ P
Sbjct: 69 LLQSINTPHRGRQLHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQAFDEITQPDLPS 128
Query: 86 WNQMIRGHARS-----------ETPEKSVYLYKQMID----------------------- 111
WN +I +A++ + PEK+V + MI
Sbjct: 129 WNAIIHANAKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEG 188
Query: 112 KETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG 171
+ P+E+T S +LS CAR G + G+ VH + +G +V + T+L+++Y +CG
Sbjct: 189 SQLRPNEFTMSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMY----AKCG 244
Query: 172 -VGCARLLFDDM-PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCA 229
+ A+ +FD++ P + V++W++ MI+ +
Sbjct: 245 SIERAKCIFDNLGPEKDVMAWSA-------------------------------MITAFS 273
Query: 230 QNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREP 289
+G S + L LF M V + V VA L AC G + G + + V
Sbjct: 274 MHGLSEECLELFARMVNDGVRPNAVTFVAVLCACVHGGLVSEGNEYFKRMMNEYGVSP-- 331
Query: 290 VLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAKQG 337
++ ++ +Y+ G IE+A+ V + M + + W +++ G G
Sbjct: 332 -MIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGARIHG 379
>gi|125541284|gb|EAY87679.1| hypothetical protein OsI_09093 [Oryza sativa Indica Group]
Length = 493
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 174/435 (40%), Positives = 250/435 (57%), Gaps = 39/435 (8%)
Query: 116 PDEYTYSFLLSVCARCG----LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG 171
P++ T +LS CA R VH RVL + S++ + T L+ Y S
Sbjct: 65 PNDVTLLTVLSACADSPSSPLARRLALSVHARVLKL-FPSHLLLSTCLVRFYFASRLP-- 121
Query: 172 VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQN 231
A LFD MP RS V++N+++ G ++ G + A+++FD MP + VSWT +I GC +N
Sbjct: 122 -HLALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKN 180
Query: 232 GKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV-----EENFSVG 286
G+ +A++ F M V D V L+A +SACAE+G L LG W+H V E N
Sbjct: 181 GRHDEAINCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERN---- 236
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--- 343
V + N+LI MYA CG++E A VF M++R VSW SMI GFA G +A+
Sbjct: 237 -----VRIANSLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHF 291
Query: 344 ------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSR 391
+TF GVL+ACSHGG DEG ++++ M +GI R+EHYGC+VDL R
Sbjct: 292 EAMRREGFKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGR 351
Query: 392 AGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLA 451
+G ++EA +V MPM+PN+ VLG+LL GCR+H + +A Q+ Q L+ E+DP A Y+
Sbjct: 352 SGRLEEAMRVVTTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLL-ELDPGGDANYV- 409
Query: 452 LVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYK 511
L++N+YAA +W VR M G+RK PG S V+I+G +H+FV+GD ++ QA I +
Sbjct: 410 LLSNIYAAVGKWDGAGKVRSLMKARGLRKRPGYSAVEIDGDVHEFVSGDRSHPQAEEISQ 469
Query: 512 TLGEITMQAMQEGYK 526
LG + + Y
Sbjct: 470 MLGLLMHEMAGHDYD 484
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
Q+ + + N +++ L+ +G + A +VF+ P W +I G ++
Sbjct: 125 LQLFDAMPVRSAVTYNTVISGLM----RNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKN 180
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
++++ ++ M+ EPD T ++S CA G G VH V+ G NV I
Sbjct: 181 GRHDEAINCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIA 240
Query: 157 TNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
+L+++Y CG V AR +F M R+VVSWNS++ G+ G A + F+ M
Sbjct: 241 NSLIDMY----ARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRR 296
Query: 216 R----NVVSWTTMISGCAQNGKSRQALSLFNEMR 245
+ V++T +++ C+ G + + L ++ MR
Sbjct: 297 EGFKPDAVTFTGVLTACSHGGLTDEGLRYYDLMR 330
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 180/515 (34%), Positives = 267/515 (51%), Gaps = 64/515 (12%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
H QI+ GF + LL FY G L A +VF N MI ++
Sbjct: 33 HCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRVFMGMPRRDVVANNAMISALSKHGYV 92
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
E++ + + D TE + +++ +++ + G
Sbjct: 93 EEA----RNLFDNMTERNSCSWNSMITCYCKLG--------------------------- 121
Query: 160 MNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM-PHRNV 218
+ ARL+FD P + VVSWN+++ GY K + A ++F M RN
Sbjct: 122 -----------DINSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNS 170
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
V+W TMIS Q G+ A+S+F +M+ V +V +V+ LSACA +G L +G+WIH Y
Sbjct: 171 VTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGY 230
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ R + V L NALI MY CG +E A VF + R+N W S+I G G
Sbjct: 231 IRTK----RLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGR 286
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
+EA+ +TF+G+LS CSH G + G+++F M +G++P +EHYG
Sbjct: 287 GEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYG 346
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
CMVDL RAG + EA L++ MPMKPN VLGSLL C+IH + +L QV Q+L+ E+DP
Sbjct: 347 CMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLL-ELDP 405
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
Y+ L +N+YA+ RW DV R+ MIK GV K PG S +++N ++H+FVAGD+++
Sbjct: 406 CDGGNYVFL-SNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSH 464
Query: 504 KQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
Q + I L EI + +G+ P+ + + IEE
Sbjct: 465 PQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEE 499
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 193/577 (33%), Positives = 297/577 (51%), Gaps = 68/577 (11%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILA-KLLAFYVTSGYLINAHKVFE 76
LT +L K L ++HS+I I+ N L KL+ Y G + +F+
Sbjct: 36 LTENLCGQILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFD 95
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
+ + +N MIR + + ++ ++K M +PD YTY +L +
Sbjct: 96 EIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWV 155
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG--VGCARLLFDDMPARSVVSWNSLL 194
G Q+H V+ G NVF+ L+++Y G+CG V R+L D MP R VVSWNSL+
Sbjct: 156 GMQIHAAVVRVGLDLNVFVGNGLISMY----GKCGCLVEACRVL-DQMPCRDVVSWNSLV 210
Query: 195 KGYVKRGDIDGAWKIFDEM-------------------------------------PHRN 217
G + G D A ++ EM +++
Sbjct: 211 AGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKS 270
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+VSW MI+ N +A+ +F +M V D +++ + L AC ++ L LG+ IH
Sbjct: 271 LVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHE 330
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
YV +P L+ L NALI MYA CG +E A VF +M+ R+ VSWTSMI+ + G
Sbjct: 331 YVVRK---RLQPNLL-LENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNG 386
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
++A+ + F+ VLSACSH G +DEGR +F+ M + I PRIEH+
Sbjct: 387 KGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHF 446
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
CMVDL RAG +DEA+ ++ MPM+PN+ V G+LL CR+++N + A +L ++
Sbjct: 447 VCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLF-QLC 505
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
PEQ +GY L++N+YA A RW+DV VR M G++K PG S +++ +H F+AGD +
Sbjct: 506 PEQ-SGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQS 564
Query: 503 YKQASLIYKTLGEITMQAMQE-GYKPDISELFLGIEE 538
+ Q+ IY+ L ++++ M+E GY P+ +EE
Sbjct: 565 HPQSKQIYEEL-DVSVGKMKEAGYVPETDSALHDVEE 600
>gi|46805412|dbj|BAD16914.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215704291|dbj|BAG93131.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 527
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 174/434 (40%), Positives = 249/434 (57%), Gaps = 39/434 (8%)
Query: 116 PDEYTYSFLLSVCARCG----LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG 171
P++ T +LS CA R VH RVL + S++ + T L+ Y S
Sbjct: 99 PNDVTLLTVLSACADSPSSPLARRLALSVHARVLKL-FPSHLLLSTCLVRFYFASRLP-- 155
Query: 172 VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQN 231
A LFD MP RS V++N+++ G ++ G + A+++FD MP + VSWT +I GC +N
Sbjct: 156 -HLALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKN 214
Query: 232 GKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV-----EENFSVG 286
G+ +A+ F M V D V L+A +SACAE+G L LG W+H V E N
Sbjct: 215 GRHDEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERN---- 270
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--- 343
V + N+LI MYA CG++E A VF M++R VSW SMI GFA G +A+
Sbjct: 271 -----VRIANSLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHF 325
Query: 344 ------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSR 391
+TF GVL+ACSHGG DEG ++++ M +GI R+EHYGC+VDL R
Sbjct: 326 EAMRREGFKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGR 385
Query: 392 AGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLA 451
+G ++EA +V MPM+PN+ VLG+LL GCR+H + +A Q+ Q L+ E+DP A Y+
Sbjct: 386 SGQLEEAMRVVTTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLL-ELDPGGDANYV- 443
Query: 452 LVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYK 511
L++N+YAA +W VR M G+RK PG S V+I+G +H+FV+GD ++ QA I +
Sbjct: 444 LLSNIYAAVGKWDGAGKVRSLMKARGLRKRPGYSAVEIDGDVHEFVSGDRSHPQAEEISQ 503
Query: 512 TLGEITMQAMQEGY 525
LG + + Y
Sbjct: 504 MLGLLMHEMAGHDY 517
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
Q+ + + N +++ L+ +G + A +VF+ P W +I G ++
Sbjct: 159 LQLFDAMPVRSAVTYNTVISGLM----RNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKN 214
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
++++ ++ M+ EPD T ++S CA G G VH V+ G NV I
Sbjct: 215 GRHDEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIA 274
Query: 157 TNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
+L+++Y CG V AR +F M R+VVSWNS++ G+ G A + F+ M
Sbjct: 275 NSLIDMY----ARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRR 330
Query: 216 R----NVVSWTTMISGCAQNGKSRQALSLFNEMR 245
+ V++T +++ C+ G + + L ++ MR
Sbjct: 331 EGFKPDAVTFTGVLTACSHGGLTDEGLRYYDLMR 364
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 169/480 (35%), Positives = 276/480 (57%), Gaps = 36/480 (7%)
Query: 85 IWNQMIRGHARSETPEK---SVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVH 141
+WN +IR + +P + + +Y +M PD +T+ FLL G++ H
Sbjct: 25 VWNIIIRAIVHNVSPPQRHSPISVYFRMRHHCVSPDFHTFPFLLPSFHNPIHLPLGQRTH 84
Query: 142 GRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKR 200
++L G + F+RT+L+N+Y CG + A +FD+ ++ + +WNS++ Y K
Sbjct: 85 AQILLFGLDKDPFVRTSLLNMY----SSCGDLSSALRIFDESVSKDLPAWNSVVNAYAKA 140
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR-----VGLDQVA 255
G I+ A K+FDEMP RNV+SW+ +I+G GK ++AL LF EM+ + V ++
Sbjct: 141 GLINHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFT 200
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
+ LSAC +G L+ GKW+HSY+++ G E + + L ALI MYA CG +E A VF
Sbjct: 201 MSTVLSACGRLGALEQGKWVHSYIDK---YGVE-IDIVLGTALIDMYAKCGSLERAKRVF 256
Query: 316 RKM-QRRNTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGF 358
+ +++ ++++MI A G E +TF+G+L AC H G
Sbjct: 257 DALGSKKDVKAYSAMICCLAMYGLTDECFQVFSEMTTSNNINPNSVTFVGILGACVHRGL 316
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLL 418
+++G+ +F+ M + +GI P I+HYGCMVDL+ R+GL+ EA S + +MPM+P+ + GSLL
Sbjct: 317 INKGKSYFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLL 376
Query: 419 LGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
G R+ + + ++L+ E+DP + Y+ L++NVYA RW +V +R +M G+
Sbjct: 377 SGSRMLGDIKTCEGALKRLI-ELDPMNSGAYV-LLSNVYAKTGRWIEVKRIRHEMEVKGI 434
Query: 479 RKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+K PG S+V++ GV+H+FV GD + +++ IY L EI + + GY D E+ L +EE
Sbjct: 435 KKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLEEIMQRLREAGYVSDTKEVLLDLEE 494
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 138/334 (41%), Gaps = 76/334 (22%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS- 96
+ H+QI++ G + ++ LL Y + G L +A ++F+++ + WN ++ +A++
Sbjct: 82 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLSSALRIFDESVSKDLPAWNSVVNAYAKAG 141
Query: 97 ----------ETPEKSV---------YL----YKQMIDKETE------------PDEYTY 121
E PE++V Y+ YK+ +D E P+++T
Sbjct: 142 LINHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTM 201
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDD 181
S +LS C R G +G+ VH + G ++ + T L+++
Sbjct: 202 STVLSACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDM------------------- 242
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM-PHRNVVSWTTMISGCAQNGKSRQALSL 240
Y K G ++ A ++FD + ++V +++ MI A G + + +
Sbjct: 243 ---------------YAKCGSLERAKRVFDALGSKKDVKAYSAMICCLAMYGLTDECFQV 287
Query: 241 FNEMRRA-RVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
F+EM + + + V V L AC G + GK + E F + + ++
Sbjct: 288 FSEMTTSNNINPNSVTFVGILGACVHRGLINKGKSYFKMMTEEFGITPS---IQHYGCMV 344
Query: 300 HMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITG 332
+Y G I+EA M + + W S+++G
Sbjct: 345 DLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 378
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 191/576 (33%), Positives = 294/576 (51%), Gaps = 66/576 (11%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILA-KLLAFYVTSGYLINAHKVFE 76
LT +L K L ++HS+I I+ N L KL+ Y G + +F+
Sbjct: 1025 LTENLCGQILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFD 1084
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
+ + +N MIR + + ++ ++K M +PD YTY +L +
Sbjct: 1085 EIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWV 1144
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG--VGCARLLFDDMPARSVVSWNSLL 194
G Q+H V+ G NVF+ L+++Y G+CG V R+L D+MP R VVSWNSL+
Sbjct: 1145 GMQIHAAVVRVGLDLNVFVGNGLISMY----GKCGCLVEACRVL-DZMPCRDVVSWNSLV 1199
Query: 195 KGYVKRGDIDGAWKIFDEM-------------------------------------PHRN 217
G + G D A ++ EM +++
Sbjct: 1200 AGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKS 1259
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+VSW MI+ N +A+ +F +M V D +++ + L AC ++ L LG+ IH
Sbjct: 1260 LVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHE 1319
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
YV +P L+ L NALI MYA CG +E A VF +M+ R+ VSWTSMI+ + G
Sbjct: 1320 YVVRK---RLQPNLL-LENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNG 1375
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
++A+ + F+ VLSACSH G +DEGR +F+ M + I PRIEH+
Sbjct: 1376 KGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHF 1435
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
CMVDL RAG +DEA+ ++ MPM+PN+ V G+LL CR+++N + A +L ++
Sbjct: 1436 VCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLF-QLC 1494
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
PEQ +GY L++N+YA A RW+DV VR M G++K PG S +++ +H F+AGD +
Sbjct: 1495 PEQ-SGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQS 1553
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ Q+ IY+ L + + + GY P+ +EE
Sbjct: 1554 HPQSKQIYEELDVLVGKMKEAGYVPETDSALHDVEE 1589
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 109/285 (38%), Gaps = 42/285 (14%)
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR-----NVVSWTTMISGCAQNGKSRQ 236
+P RS N + A D P R N++ +IS + +Q
Sbjct: 947 LPRRSSSDDNDPQDHGTHSSSVSKALFQDDRTPSRIKLCDNLIDPVDLISASPPSA-VKQ 1005
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEI----GDLKLGKWIHSYVEENFSVGREPVLV 292
+L +++ + V L L C +I D+K K +HS + + + P
Sbjct: 1006 LQTLVLSIQKPKFTQQXVVLTENL--CGQILDKNPDIKYLKKLHSKICIDHDLHSNP--- 1060
Query: 293 SLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSA 352
SL L+ YA CGE +F ++ ++N V + MI + +ALL F +
Sbjct: 1061 SLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNM--- 1117
Query: 353 CSHGGFVDEGRQFFECM-------NQNW------------GIKPRIEHYGCMVDLFSRAG 393
HG +D + C+ W G+ + ++ ++ + G
Sbjct: 1118 AGHG--IDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCG 1175
Query: 394 LMDEAFSLVQNMPMKPNDAV-LGSLLLGCRIHNNAELASQVAQKL 437
+ EA ++ MP + D V SL+ GC + + A +V +++
Sbjct: 1176 CLVEACRVLDZMPCR--DVVSWNSLVAGCARNGQFDDALEVCKEM 1218
>gi|297599966|ref|NP_001048246.2| Os02g0769900 [Oryza sativa Japonica Group]
gi|46805413|dbj|BAD16915.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255671273|dbj|BAF10160.2| Os02g0769900 [Oryza sativa Japonica Group]
Length = 438
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 174/435 (40%), Positives = 249/435 (57%), Gaps = 39/435 (8%)
Query: 116 PDEYTYSFLLSVCARCG----LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG 171
P++ T +LS CA R VH RVL + S++ + T L+ Y S
Sbjct: 10 PNDVTLLTVLSACADSPSSPLARRLALSVHARVLKL-FPSHLLLSTCLVRFYFASRLP-- 66
Query: 172 VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQN 231
A LFD MP RS V++N+++ G ++ G + A+++FD MP + VSWT +I GC +N
Sbjct: 67 -HLALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKN 125
Query: 232 GKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV-----EENFSVG 286
G+ +A+ F M V D V L+A +SACAE+G L LG W+H V E N
Sbjct: 126 GRHDEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERN---- 181
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--- 343
V + N+LI MYA CG++E A VF M++R VSW SMI GFA G +A+
Sbjct: 182 -----VRIANSLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHF 236
Query: 344 ------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSR 391
+TF GVL+ACSHGG DEG ++++ M +GI R+EHYGC+VDL R
Sbjct: 237 EAMRREGFKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGR 296
Query: 392 AGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLA 451
+G ++EA +V MPM+PN+ VLG+LL GCR+H + +A Q+ Q L+ E+DP A Y+
Sbjct: 297 SGQLEEAMRVVTTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLL-ELDPGGDANYV- 354
Query: 452 LVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYK 511
L++N+YAA +W VR M G+RK PG S V+I+G +H+FV+GD ++ QA I +
Sbjct: 355 LLSNIYAAVGKWDGAGKVRSLMKARGLRKRPGYSAVEIDGDVHEFVSGDRSHPQAEEISQ 414
Query: 512 TLGEITMQAMQEGYK 526
LG + + Y
Sbjct: 415 MLGLLMHEMAGHDYD 429
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
Q+ + + N +++ L+ +G + A +VF+ P W +I G ++
Sbjct: 70 LQLFDAMPVRSAVTYNTVISGLM----RNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKN 125
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
++++ ++ M+ EPD T ++S CA G G VH V+ G NV I
Sbjct: 126 GRHDEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIA 185
Query: 157 TNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
+L+++Y CG V AR +F M R+VVSWNS++ G+ G A + F+ M
Sbjct: 186 NSLIDMY----ARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRR 241
Query: 216 R----NVVSWTTMISGCAQNGKSRQALSLFNEMR 245
+ V++T +++ C+ G + + L ++ MR
Sbjct: 242 EGFKPDAVTFTGVLTACSHGGLTDEGLRYYDLMR 275
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 175/531 (32%), Positives = 285/531 (53%), Gaps = 63/531 (11%)
Query: 29 IRNTTKT--LFQIHSQIIINGFSQKNYILAKLL--AFYVTSGYLINAHKVFEKTENPSTA 84
I+ T+ L I + ++ +Q ++ +KL+ + SG++ AH++F T +P+
Sbjct: 14 IKRCTRVGDLKAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFSCTHHPNLF 73
Query: 85 IWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFR--EGEQVHG 142
+WN +IRG++ S++P ++ LY+ M P+ YT+ F+L C C L R EG+++H
Sbjct: 74 MWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKAC--CKLLRLCEGQELHS 131
Query: 143 RVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGD 202
+++ G + T L+N L+K Y G
Sbjct: 132 QIVKVG----LDFETPLVN------------------------------GLIKLYAACGC 157
Query: 203 IDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSA 262
+D A +FDEMP + SW+TM+SG AQNG++ +AL LF EM+ V D L + +
Sbjct: 158 MDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGV 217
Query: 263 CAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRN 322
C ++G L LGKW+HSY+++ + V L AL+ MY+ CG ++ A VF+ M R+
Sbjct: 218 CGDLGALDLGKWVHSYMDKEGV----KIDVVLGTALVGMYSKCGSLDNALKVFQGMAERD 273
Query: 323 TVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFE 367
+W++MI G+A G+ ++AL +TF VLSACSH G V++G Q FE
Sbjct: 274 VTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFE 333
Query: 368 CMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNA 427
M + I P+I+HYGCMVDLF RAG++ A +Q MP++PN + +LL C+ H
Sbjct: 334 TMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYK 393
Query: 428 ELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWV 487
+L +++K++ ++DP Y+ LV+NVYA+ RW V VR M +K G S +
Sbjct: 394 DLGEHISRKIL-KLDPSSPENYV-LVSNVYASLGRWSSVCQVRSLMKDKAPKKQHGWSSI 451
Query: 488 QINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+IN ++H F+ GD ++ + IY L ++ + Q G+ ++ I+E
Sbjct: 452 EINFMVHKFIMGDESHPEREKIYGMLHQMARKLKQVGHVNSTVDVLHDIDE 502
>gi|297843364|ref|XP_002889563.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
gi|297335405|gb|EFH65822.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
Length = 500
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 172/472 (36%), Positives = 273/472 (57%), Gaps = 34/472 (7%)
Query: 75 FEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLF 134
++ + +T W I R+ ++ + M EP+ T+ +LS CG F
Sbjct: 28 LNQSTSENTVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIAILS---GCGDF 84
Query: 135 REGEQVHGRVLASGYC------SNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVV 188
G + G +L C ++V + T ++ +Y G V AR +FD M ++ V
Sbjct: 85 PSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGR---VKKARCVFDYMEDKNSV 141
Query: 189 SWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR 248
+WN+++ GY++ G +D A K+FD+MP R+++SWT MI+G G +AL+ F EM+ +
Sbjct: 142 TWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFREMQISG 201
Query: 249 VGLDQVALVAALSACAEIGDLKLGKWIHSYV-EENFSVGREPVLVSLNNALIHMYASCGE 307
V D VA++AAL+AC +G L G W+H YV ++F V ++N+LI +Y CG
Sbjct: 202 VKPDYVAIIAALNACTNLGALSFGLWVHRYVMSQDFKNN-----VRVSNSLIDLYCRCGC 256
Query: 308 IEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALL---------------TFLGVLSA 352
+E A VF KM++R VSW S+I GFA G A E+L+ TF G L+A
Sbjct: 257 VEFARQVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEERFKPDAVTFTGALTA 316
Query: 353 CSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDA 412
CSH G V+EG ++F+ M ++ I PRIEHYGC+VDL+SRAG +++A LVQ+MPMKPN+
Sbjct: 317 CSHVGLVEEGLRYFQIMISDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEV 376
Query: 413 VLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQK 472
V+GSLL CR H N + ++ K + +++ + + Y+ L +N+YAA +W+ + +R+K
Sbjct: 377 VIGSLLAACRNHGNNTVLAEKLMKHLTDLNVKSHSNYVIL-SNMYAADGKWEGASKMRRK 435
Query: 473 MIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEG 524
M +G++K PG S ++I+ H F+AGDS + + + I + L I+ +G
Sbjct: 436 MKGLGLKKQPGFSSIEIDDCTHVFMAGDSAHVETTNICEVLKLISSNLRLQG 487
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 140/350 (40%), Gaps = 80/350 (22%)
Query: 50 QKNYIL--AKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS----------- 96
+N+++ ++ Y G + A VF+ E+ ++ WN MI G+ RS
Sbjct: 105 DRNHVMVGTAIIGMYSKRGRVKKARCVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFD 164
Query: 97 ETPEKSVYLYKQMID--------------------KETEPDEYTYSFLLSVCARCGLFRE 136
+ PE+ + + MI+ +PD L+ C G
Sbjct: 165 KMPERDLISWTAMINGFVNKGFHEEALAWFREMQISGVKPDYVAIIAALNACTNLGALSF 224
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGC---ARLLFDDMPARSVVSWNSL 193
G VH V++ + +NV + +L++LY C GC AR +FD M R+VVSWNS+
Sbjct: 225 GLWVHRYVMSQDFKNNVRVSNSLIDLY------CRCGCVEFARQVFDKMEKRTVVSWNSV 278
Query: 194 LKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQ 253
+ G+ A NG + ++L F +M+ R D
Sbjct: 279 IVGF-------------------------------AANGNAHESLVYFRKMQEERFKPDA 307
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
V AL+AC+ +G ++ G Y + S R + L+ +Y+ G +E+A
Sbjct: 308 VTFTGALTACSHVGLVEEGL---RYFQIMISDYRISPRIEHYGCLVDLYSRAGRLEDALK 364
Query: 314 VFRKM-QRRNTVSWTSMITGFAKQG---YAQEALLTFLGVLSACSHGGFV 359
+ + M + N V S++ G E L+ L L+ SH +V
Sbjct: 365 LVQSMPMKPNEVVIGSLLAACRNHGNNTVLAEKLMKHLTDLNVKSHSNYV 414
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H ++ F + L+ Y G + A +VF+K E + WN +I G A +
Sbjct: 228 VHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGN 287
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+S+ +++M ++ +PD T++ L+ C+ GL EG
Sbjct: 288 AHESLVYFRKMQEERFKPDAVTFTGALTACSHVGLVEEG 326
>gi|357154550|ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 657
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 167/494 (33%), Positives = 277/494 (56%), Gaps = 26/494 (5%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
H ++ GF Q+ ++ LL F+ ++G L ++ + F + + + WN MI G+A++
Sbjct: 137 HGVVVKLGFVQQIFVANALLHFHASAGSLRDSRRFFGEMADRNVVSWNTMIGGYAQAGEV 196
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
++ L+ +M + D +T LL C+ G G VH +L SG + + L
Sbjct: 197 SEACALFGEMRHQGLLADVFTLVSLLFACSSEGNLEVGRLVHCHMLVSGSRVDRILGNAL 256
Query: 160 MNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
+++Y G+CG + A FD MP ++VV+W S+L K G +D F++MP RN+
Sbjct: 257 LDMY----GKCGDLWMAHRCFDMMPIKNVVTWTSMLCAQAKHGSVDAVRDWFEQMPERNI 312
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
VSW MIS Q G+ + L L+N MR + D+ L LSAC + GDL GK IH Y
Sbjct: 313 VSWNAMISCYVQCGRLHETLDLYNRMRSLGITPDEFTLAGVLSACGQNGDLASGKMIHCY 372
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
V +NF+ +P V+L N+L+ MYA CG+++ A G+F +M +N +SW +I A G
Sbjct: 373 VRDNFN---DPG-VTLLNSLLDMYARCGQVDTAIGLFTEMPNKNVISWNVIIGALAMHGR 428
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
AQE + +TF+G+LSACSHGG ++ G +FE M + + ++P +EHYG
Sbjct: 429 AQETVTFFRTMVSDAFSPDEITFVGLLSACSHGGLLEAGEYYFEAMARVYNVEPEVEHYG 488
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
CMVDL R G + +A +L+++M +KP+ V G+LL CRIH N E+ V ++L+ E++
Sbjct: 489 CMVDLLGRRGHLAKAVNLIKDMSIKPDVVVWGALLGACRIHGNVEIGKLVIKQLL-ELEG 547
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
G L+ N++ +W+D+ +R+ M + G +K G S +++ ++H+F D +
Sbjct: 548 -ITGGLFVLICNLFYETNQWEDMKKLRKLMKEQGTKKDMGVSSIEVKNIIHEFGVEDLRH 606
Query: 504 KQASLIYKTLGEIT 517
+ + IY + +++
Sbjct: 607 ESTNEIYAAVDQLS 620
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 201/446 (45%), Gaps = 91/446 (20%)
Query: 15 SKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVT------SGYL 68
+ + +R + LL+ + + L QIH+ ++++GFS + + ++L+A Y T G L
Sbjct: 5 AAVVASRHVLELLRQCRSIQHLDQIHAHLVVHGFSDVSSVASQLIASYCTLSAGDRDGGL 64
Query: 69 INAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVC 128
+A ++F++ P ++N ++R ++ S+ P++++ L++ ++ + P+E+T F+L C
Sbjct: 65 CHARRLFDRIPEPDRFMYNTLVRAYSNSDCPQEALRLHRGVLQRGILPNEFTLPFVLKAC 124
Query: 129 ARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVV 188
HG V+ G+ +F+ L++ + +G + +R F +M R+VV
Sbjct: 125 TTVRAVEHALAAHGVVVKLGFVQQIFVANALLHFHASAG---SLRDSRRFFGEMADRNVV 181
Query: 189 SWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR 248
SWN+++ GY + G++ A +F EM H+ +++
Sbjct: 182 SWNTMIGGYAQAGEVSEACALFGEMRHQGLLA---------------------------- 213
Query: 249 VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEI 308
D LV+ L AC+ G+L++G+ +H ++ V V L NAL+ MY CG++
Sbjct: 214 ---DVFTLVSLLFACSSEGNLEVGRLVHCHM----LVSGSRVDRILGNALLDMYGKCGDL 266
Query: 309 EEAYGVFRKMQRRNTVSWTSMITGFAKQG--------------------------YAQ-- 340
A+ F M +N V+WTSM+ AK G Y Q
Sbjct: 267 WMAHRCFDMMPIKNVVTWTSMLCAQAKHGSVDAVRDWFEQMPERNIVSWNAMISCYVQCG 326
Query: 341 ---EAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
E L T GVLSAC G + G+ + N+ P +
Sbjct: 327 RLHETLDLYNRMRSLGITPDEFTLAGVLSACGQNGDLASGKMIHCYVRDNFN-DPGVTLL 385
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMK 408
++D+++R G +D A L MP K
Sbjct: 386 NSLLDMYARCGQVDTAIGLFTEMPNK 411
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 174/487 (35%), Positives = 275/487 (56%), Gaps = 22/487 (4%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
++A YV + L+ A ++ E + WN MI G+ E++ L ++M + D
Sbjct: 214 IIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLD 273
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCAR 176
EYTY+ ++S + GLF G QVH VL + + ++ N + CG + AR
Sbjct: 274 EYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEAR 333
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
+FD MP + +VSWN++L G V I+ A IF EMP R++++WT MISG AQNG +
Sbjct: 334 RVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEE 393
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
L LFN+M+ + A A+++C+ +G L G+ +HS + +G + L S+ N
Sbjct: 394 GLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQI---IQLGHDSSL-SVGN 449
Query: 297 ALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------- 343
ALI MY+ CG +E A VF M ++VSW +MI A+ G+ +A+
Sbjct: 450 ALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILP 509
Query: 344 --LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
+TFL +LSACSH G V EGR +F+ M +GI P +HY ++DL RAG+ EA ++
Sbjct: 510 DRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNV 569
Query: 402 VQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAK 461
++MP +P + +LL GC IH N EL Q A +L+ E+ P+Q Y++L +N+YAA
Sbjct: 570 TESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLL-ELMPQQDGTYISL-SNMYAALG 627
Query: 462 RWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAM 521
+W +VA VR+ M + GV+K PG SW+++ ++H F+ D+ + + +Y+ L ++ +
Sbjct: 628 QWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEVHAVYRYLEQLVHEMR 687
Query: 522 QEGYKPD 528
+ GY PD
Sbjct: 688 KLGYVPD 694
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 194/449 (43%), Gaps = 66/449 (14%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENP--STAIWNQMIRGHARSETPEKSVYLYKQMIDKETE 115
+L+ Y +G + AH++F T T +N MI + S ++ L+ QM
Sbjct: 68 MLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFV 127
Query: 116 PDEYTYSFLLSVCARCGLFREGE----QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG 171
PD +T+S SV L + E Q+H V G S + LM+ Y+
Sbjct: 128 PDPFTFS---SVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPL 184
Query: 172 V------GCARLLFDDMPA--RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTT 223
V AR LFD+ P R +W +++ GYV+ D+ A ++ + M V+W
Sbjct: 185 VNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNA 244
Query: 224 MISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENF 283
MISG G +A L M + LD+ + +SA + G +G+ +H+YV
Sbjct: 245 MISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTV 304
Query: 284 SVGREPVLVSLNNALIHMYASCGE-------------------------------IEEAY 312
++S+NNALI +Y CG+ IEEA
Sbjct: 305 VQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEAN 364
Query: 313 GVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF---------------LGVLSACSHGG 357
+FR+M R+ ++WT MI+G A+ G+ +E L F G +++CS G
Sbjct: 365 SIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLG 424
Query: 358 FVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSL 417
+D G+Q + Q G + ++ ++SR GL++ A ++ MP + ++
Sbjct: 425 SLDNGQQLHSQIIQ-LGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYV-DSVSWNAM 482
Query: 418 LLGCRIHNNAELASQVAQKLVAE-IDPEQ 445
+ H + A Q+ +K++ E I P++
Sbjct: 483 IAALAQHGHGVQAIQLYEKMLKEDILPDR 511
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 147/363 (40%), Gaps = 75/363 (20%)
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVK 199
VH +L SG+ I L++ Y S + AR LFD +P +V+ ++L Y
Sbjct: 18 VHAHILTSGFKPFPLIINRLIDHYCKS---FNIPYARYLFDKIPKPDIVAATTMLSAYSA 74
Query: 200 RGDIDGAWKIFDEMPH--RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
G+I A ++F+ P R+ VS+ MI+ + + AL LF +M+R D
Sbjct: 75 AGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFS 134
Query: 258 AALSACAEIGDLKLG-KWIHSYVEENFSVGREPVLVSLNNALIHMYASCG---------- 306
+ L A + I D + + +H E F G V S+ NAL+ Y SC
Sbjct: 135 SVLGALSLIADEETHCQQLHC---EVFKWGALSV-PSVLNALMSCYVSCASSPLVNSCVL 190
Query: 307 --------------------------------EIEEAYGVFRKMQRRNTVSWTSMITGFA 334
++ A + M V+W +MI+G+
Sbjct: 191 MAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYV 250
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
+G+ +EA T+ V+SA S+ G + GRQ + + ++P
Sbjct: 251 HRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTV-VQPS- 308
Query: 380 EHY-----GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVA 434
H+ ++ L++R G + EA + MP+K + ++L GC E A+ +
Sbjct: 309 GHFVLSVNNALITLYTRCGKLVEARRVFDKMPVK-DLVSWNAILSGCVNARRIEEANSIF 367
Query: 435 QKL 437
+++
Sbjct: 368 REM 370
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+HSQII G + L+ Y G + A VF + WN MI A+
Sbjct: 431 QLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHG 490
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
+++ LY++M+ ++ PD T+ +LS C+ GL +EG
Sbjct: 491 HGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRH 532
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 178/508 (35%), Positives = 279/508 (54%), Gaps = 30/508 (5%)
Query: 50 QKNYILAKLLAFYVTSGYLINAHKVFEK-TENPSTAIWNQMIRGHARSETPEKSVYLYKQ 108
+ +I L+ YV +G L A ++ + TE P A WN MI G+ E ++ L+++
Sbjct: 221 RNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIA-WNAMISGYLHHGLFEDALTLFRK 279
Query: 109 MIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSN----VFIRTNLMNLYL 164
M + DE TY+ ++S CA G F G+QVH +L + + + + L+ LY
Sbjct: 280 MRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYW 339
Query: 165 MSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTM 224
G V AR +F +MP + +++WN+LL GYV G ++ A F +MP +N+++WT M
Sbjct: 340 KYGK---VDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVM 396
Query: 225 ISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFS 284
ISG AQNG QAL LFN+M+ + A A++AC+ +G L+ G+ +H+ +
Sbjct: 397 ISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQI---VH 453
Query: 285 VGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL- 343
+G + L S+ NA+I MYA CG +E A +F M + VSW SMI + G+ +A+
Sbjct: 454 LGHDSTL-SVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIE 512
Query: 344 --------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLF 389
TFL VLSACSH G V+EG ++F M +N+GI P +HY M+DLF
Sbjct: 513 LYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLF 572
Query: 390 SRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGY 449
RAG +A +++ +MP + + +LL GCR H N +L + A+KL I P+ Y
Sbjct: 573 CRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLI-PQHDGTY 631
Query: 450 LALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLI 509
+ L++N+YA+ RW DVA R+ M GV+K P SW ++ +H F+ D+ + + I
Sbjct: 632 V-LLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPEVLSI 690
Query: 510 YKTLGEITMQAMQEGYKPDISELFLGIE 537
Y L ++ ++ + GY PD + +E
Sbjct: 691 YNYLEKLNLEMKKIGYIPDTKYVLHDME 718
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/457 (25%), Positives = 204/457 (44%), Gaps = 91/457 (19%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPS---------------- 82
+H +I +GF + +I+ +L+ Y S + A K+F++ P
Sbjct: 35 VHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAYSALGN 94
Query: 83 -----------------TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
T +N MI G++ ++ L++ M +PD++T++ +L
Sbjct: 95 LKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVL 154
Query: 126 SVCARCGLF---REGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG------VGCAR 176
S A +F R+ Q+HG V+ G + L+++Y+ + AR
Sbjct: 155 S--ASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMASAR 212
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
LFD+MP R+ W +L+ GYV+ GD+ GA +I D M + ++W MISG +G
Sbjct: 213 KLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFED 272
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
AL+LF +MR V +D+ + +SACA+ G LGK +H+Y+ +N L+S+ N
Sbjct: 273 ALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGN 332
Query: 297 ALIHM-------------------------------YASCGEIEEAYGVFRKMQRRNTVS 325
LI + Y + G +EEA F +M +N ++
Sbjct: 333 TLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLT 392
Query: 326 WTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMN 370
WT MI+G A+ G+ ++AL F G ++ACS G ++ GRQ +
Sbjct: 393 WTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQI- 451
Query: 371 QNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM 407
+ G + M+ +++R G+++ A ++ MP
Sbjct: 452 VHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPF 488
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 11/187 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H+QI+ G + ++ Y G + A +F WN MI +
Sbjct: 446 QLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHG 505
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLAS-GYCSNVFIR 156
K++ LY+QM+ + PD T+ +LS C+ GL EG + +L + G
Sbjct: 506 HGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHY 565
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMP--ARSVVSWNSLLKGYVKRGDID----GAWKIF 210
+++L+ +G A+ + D MP AR+ + W +LL G G++D A K+F
Sbjct: 566 ARMIDLFCRAG---KFSDAKNVIDSMPFEARAPI-WEALLAGCRTHGNMDLGIEAAEKLF 621
Query: 211 DEMPHRN 217
+P +
Sbjct: 622 KLIPQHD 628
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 164/519 (31%), Positives = 290/519 (55%), Gaps = 27/519 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H+QII G +Q I LL Y G + +A ++F+ W ++ S
Sbjct: 24 KLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACNLSN 83
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLF--REGEQVHGRVLASGYCSNVFI 155
P +++ + + ++ PD + ++ L+ CA G+ ++G+QVH R S + + +
Sbjct: 84 RPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDDVV 143
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
+++L+++Y G R +FD + + + +SW +++ GY + G A+++F + P+
Sbjct: 144 KSSLIDMYAKFGLP---DYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPY 200
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL-DQVALVAALSACAEIGDLKLGKW 274
RN+ +WT +ISG Q+G A LF EMR + + D + L + + ACA + +LGK
Sbjct: 201 RNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQ 260
Query: 275 IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
+H V ++G E L ++NALI MYA C ++ A +F +M R++ VSWTS+I G A
Sbjct: 261 MHGVV---ITLGYESCLF-ISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTA 316
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
+ G A+EAL +TF+G++ ACSH G V +GR F M ++ GI P +
Sbjct: 317 QHGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSL 376
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
+HY C++DLFSR+G +DEA +L++ MP+ P++ +LL C+ H N ++A ++A L+
Sbjct: 377 QHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLL- 435
Query: 440 EIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG 499
+ PE + Y+ L++N+YA A W+DV+ VR+ M+ + +K PG S + + H F AG
Sbjct: 436 NLKPEDPSSYI-LLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCIDLGKGSHVFYAG 494
Query: 500 DSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++++ I + E+ + + GY PD S + +++
Sbjct: 495 ETSHPMRDEIIGLMRELDEEMRKRGYAPDTSSVLHDMDQ 533
>gi|108862877|gb|ABA99065.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 491
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 178/512 (34%), Positives = 275/512 (53%), Gaps = 64/512 (12%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+HS ++ G + ++ L+ Y +G +A KVF++ WN + R
Sbjct: 27 VHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVR--- 83
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
E + +++ D+ E D +++ +L G + GE
Sbjct: 84 -EGELAGVRKLFDEMPEKDTVSWNTILD-----GYTKAGE-------------------- 117
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
V A LF MP R+VVSW++++ GY K+GD++ A IFD+MP +N+
Sbjct: 118 -------------VEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNL 164
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
V+WT M+S CAQ G +A LF +M+ A V LD A+V+ L+ACAE G L LGK IH Y
Sbjct: 165 VTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRY 224
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF-RKMQRRNTVSWTSMITGFAKQG 337
V + ++GR + NALI M+ CG + A VF + ++++VSW S+I GFA G
Sbjct: 225 VRKR-NLGRS---THVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHG 280
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+ +AL +T + VLSAC+H GFVDEGR+ F M +++GI P+IEHY
Sbjct: 281 HGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHY 340
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
GCM+DL R GL+ EA L+++MP +PN+ + GSLL CR+H N E A ++A ++++
Sbjct: 341 GCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYA-EIAVNELSKLQ 399
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P A Y A+++N+YA A +W D+A R +M G +K G SWV++N H+F GD
Sbjct: 400 PSNAGNY-AVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRK 458
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFL 534
++ + I + + ++ G P EL +
Sbjct: 459 HQDSDQISEMVDRLSSHVKHVGCVPAGHELLV 490
>gi|297837569|ref|XP_002886666.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
gi|297332507|gb|EFH62925.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
Length = 608
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 299/545 (54%), Gaps = 67/545 (12%)
Query: 2 LVEEIIPAN-PATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKN---YILAK 57
L I PAN P+ S+ R+I SL + + L Q+H+ + + + ++ K
Sbjct: 10 LSPHIQPANSPSASTAGNHHRRILSLAETCSDMSQLKQLHAFTLRTTYPDEPATLFLYGK 69
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET-PEKSVYLYKQMIDK-ETE 115
+L + + A +VF+ EN S+ +WN +IR A + E++ LY++M+++ E+
Sbjct: 70 ILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESA 129
Query: 116 PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGC 174
PD++T+ F+L CA EG+QVH +++ G+ +V++ L++ Y G CG +
Sbjct: 130 PDKHTFPFVLKACAYIFGLSEGKQVHCQIVKHGFSGDVYVNNGLIHFY----GSCGCLDL 185
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
AR +FD+MP RS+VSWNS++ V+ G+ D
Sbjct: 186 ARKVFDEMPERSLVSWNSMIDALVRVGEYDS----------------------------- 216
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
AL LF +M+++ D + + LSACA +G L LG W H ++ N V + V +
Sbjct: 217 --ALQLFRDMQKS-FEPDGYTMQSVLSACAGLGSLSLGTWSHVFLLRNCDVD-VAMDVLI 272
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------- 343
N+LI MY CG + A VF+ M++ + SW +MI GFA G A+EA+
Sbjct: 273 KNSLIEMYCKCGSLRMAEQVFQGMRKHDLASWNAMILGFATHGKAEEAMNCFDCMVKEGK 332
Query: 344 ------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDE 397
+TF+ +L AC+H G V++GRQ+F+ M + +GI+P +EHYGC++DL +RAG + E
Sbjct: 333 NVKPNSVTFVALLIACNHRGMVNKGRQYFDMMVREYGIEPALEHYGCIIDLLARAGYITE 392
Query: 398 AFSLVQNMPMKPNDAVLGSLLLG-CRIHNNAELASQVAQKLVAEIDPEQA-----AGYLA 451
A +V +MPMKP+ + SLL C+ + EL+ ++A+ ++ ++ Q+ +G
Sbjct: 393 AIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTMEDNQSSNSNCSGAYV 452
Query: 452 LVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYK 511
L++ VYA+A RW DV VR+ M G+RK PG S ++ING+ ++F AGD+++ Q IY+
Sbjct: 453 LLSRVYASANRWNDVGIVRKLMSDHGIRKEPGCSSIEINGISNEFFAGDTSHPQTKQIYQ 512
Query: 512 TLGEI 516
L I
Sbjct: 513 QLKVI 517
>gi|19071652|gb|AAL84319.1|AC073556_36 putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
Length = 545
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 174/515 (33%), Positives = 275/515 (53%), Gaps = 55/515 (10%)
Query: 32 TTKTLFQIHSQIIINGFSQKNYILAKLL--AFYVTSGYLINAHKVFEKTENPSTAIWNQM 89
+ + + Q+H+ + + GF L +LL + G + +A+ VF++ P ++N +
Sbjct: 20 SLRHIKQMHAVMALRGFLSDPSELRELLFASAVAVRGAIAHAYLVFDQIPRPDRFMYNTL 79
Query: 90 IRGHARSETPEKSVYLYKQMIDKE----TEPDEYTYSFLLSVCARCGLFREGEQVHGRVL 145
IRG A + P +V LY +M+ + PD+ T+ F+L C G G QVH V+
Sbjct: 80 IRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQVHAHVV 139
Query: 146 ASGYCSNVFIRTNLMNLYLMSGG----------------------------ECGVGCARL 177
+G S+ F++ L+ ++ G +G AR
Sbjct: 140 KAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCARRGDIGAARD 199
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
LFD+ P + +VSWN ++ Y KRGD+ A ++FD++P R+VVSW MISG + G A
Sbjct: 200 LFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHA 259
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
L LF +M+R D V +++ LSACA+ GDL +G+ +HS + + FS PV+ L NA
Sbjct: 260 LELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGFPVV--LGNA 317
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------------- 343
LI MYA CG ++ A+ VF M+ ++ +W S++ G A G+ E++
Sbjct: 318 LIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPD 377
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
+TF+ VL ACSHGG VD+GR+FF M + ++P I+HYGCMVD+ RAGL+ EAF +
Sbjct: 378 EITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFI 437
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKR 462
M +PN + +LL CR+H ELA ++L+ + E +G L++N+YA+
Sbjct: 438 DTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQLLKARNDE--SGDYVLLSNIYASVGE 495
Query: 463 WQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
W +R+ M GV K GQ++V +G + D +
Sbjct: 496 WFGSEKMRKLMDDSGVNKEAGQTFV--DGSVKDII 528
>gi|359492781|ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 658
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 179/495 (36%), Positives = 276/495 (55%), Gaps = 36/495 (7%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVT-SGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
IH +I+ GF ++ LL FY S L +A++VFE+ WN MI +
Sbjct: 96 IHGEILKLGFGSSVFVQNSLLGFYANCSENLGSAYRVFEEMPERDVISWNSMISAYMTRG 155
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE-QVHGRVLASGYCSNVFIR 156
+ ++ L +DK E + T++ ++ CGL + G ++ V N
Sbjct: 156 EIQSAIGL----LDKMPERNIVTWNSVV-----CGLSKAGNMELAHSVFEQMPLRNEVSW 206
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
++++ Y+ G V A+ +F MP ++VVSW +++ GY GD+ A IF+ MP +
Sbjct: 207 NSMISGYVRIGD---VRAAQSIFYQMPEKTVVSWTAMISGYATNGDLKSAENIFNHMPVK 263
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMR-RARVGLDQVALVAALSACAEIGDLKLGKWI 275
NVVSW MISG N + QAL +F+ M DQ L++ LSACA +G L+ GKWI
Sbjct: 264 NVVSWNAMISGYVHNHEFDQALCVFHHMLINGECRPDQTTLISILSACAHLGSLEHGKWI 323
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
+SY+++N + + + L NALI M+A CG++E A VF M +R ++WT+M++G A
Sbjct: 324 NSYIKKN----KLHLSIPLGNALIDMFAKCGDVENAKEVFHHMSKRCIITWTTMVSGLAV 379
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
G +EA+ + F+ VLSAC+HGG V+EG++ F+ M Q +GIKPRIE
Sbjct: 380 NGKCREAINLFDKMCLEGTKPDDVIFIAVLSACTHGGLVEEGKRVFDQMVQEFGIKPRIE 439
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HYGCMVDL RAG ++EA M +KPN + +LL C+IH N +L V +K++ +
Sbjct: 440 HYGCMVDLLGRAGKLEEAVRFTARMHLKPNAVIWATLLFCCKIHGNGDLLKSVTEKIMDQ 499
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
+P + YL LV+N+ A+ RW+DV + R M + + K PG S +Q+ +H+F+A D
Sbjct: 500 -EPSNPS-YLTLVSNLSASFGRWEDVLSFRVAMRQQRMEKVPGCSSIQVGNRVHEFLAKD 557
Query: 501 STYKQASLIYKTLGE 515
+ + Q IY+ L
Sbjct: 558 TRHVQRKEIYRALSH 572
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 195/403 (48%), Gaps = 61/403 (15%)
Query: 21 RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTEN 80
+++ +LQ + L Q H QI I+G +++L KL+ V+S + + +
Sbjct: 3 QKMLRILQHCKNIRELKQTHLQIFIHGLQHSDFMLPKLIT--VSSAFNLLDYA------- 53
Query: 81 PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
T ++++ +Y +M E + +T++FLL +G +
Sbjct: 54 -----------------THKEALRVYSRMKALMVEANSFTFTFLLKCFETSQALEDGRVI 96
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECG--VGCARLLFDDMPARSVVSWNSLLKGYV 198
HG +L G+ S+VF++ +L+ Y C +G A +F++MP R V+SWNS++ Y+
Sbjct: 97 HGEILKLGFGSSVFVQNSLLGFY----ANCSENLGSAYRVFEEMPERDVISWNSMISAYM 152
Query: 199 KRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVA 258
RG+I A + D+MP RN+V+W +++ G ++ G A S+F +M ++V+ +
Sbjct: 153 TRGEIQSAIGLLDKMPERNIVTWNSVVCGLSKAGNMELAHSVFEQMPLR----NEVSWNS 208
Query: 259 ALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM 318
+S IGD++ + I F E +VS A+I YA+ G+++ A +F M
Sbjct: 209 MISGYVRIGDVRAAQSI-------FYQMPEKTVVSW-TAMISGYATNGDLKSAENIFNHM 260
Query: 319 QRRNTVSWTSMITGFAKQGYAQEALLTF----------------LGVLSACSHGGFVDEG 362
+N VSW +MI+G+ +AL F + +LSAC+H G ++ G
Sbjct: 261 PVKNVVSWNAMISGYVHNHEFDQALCVFHHMLINGECRPDQTTLISILSACAHLGSLEHG 320
Query: 363 RQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
+ + +N + I ++D+F++ G ++ A + +M
Sbjct: 321 KWINSYIKKN-KLHLSIPLGNALIDMFAKCGDVENAKEVFHHM 362
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 172/496 (34%), Positives = 264/496 (53%), Gaps = 53/496 (10%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
L+ Y + GY+ NA K+F++ WN MI G+ + ++++ LYK M+ +PD
Sbjct: 137 LITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPD 196
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
E T ++S CA+ G G Q+H + G+ SN+ I L++LY
Sbjct: 197 ESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLY-------------- 242
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
K G+++ A +F + ++V+SW T+I G ++A
Sbjct: 243 --------------------SKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEA 282
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
L LF EM R+ + V +++ L ACA +G + +G+WIH Y+ + SL +
Sbjct: 283 LLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNAS--SLLTS 340
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------------- 343
LI MYA CG+IE A VF M R+ SW +MI GFA G A A
Sbjct: 341 LIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPD 400
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
+TF+G+LSACSH G +D GR F M+Q++ I P++EHYGCM+DL GL EA ++
Sbjct: 401 DITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMI 460
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKR 462
+ MPM+P+ + SLL C++HNN EL AQ L+ +I+PE Y+ L++N+YA A R
Sbjct: 461 RTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLI-KIEPENPGSYV-LLSNIYATAGR 518
Query: 463 WQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQ 522
W VA +R + G++K PG S ++I+ V+H+F+ GD + + IY+ L E+ M +
Sbjct: 519 WDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIGDKFHPRNREIYRMLEEMEMLMEE 578
Query: 523 EGYKPDISELFLGIEE 538
G+ PD SE+ +EE
Sbjct: 579 TGFVPDTSEVLQEMEE 594
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 221/409 (54%), Gaps = 28/409 (6%)
Query: 57 KLLAFYVTSGY---LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKE 113
+L+ F V S + L A +FE + P+ IWN M RGHA + ++ LY MI
Sbjct: 1 QLIEFSVLSPHFDGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLG 60
Query: 114 TEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVG 173
P+ Y++ FLL CA+ EG+Q+HG VL GY ++++ T+L+++Y +G +
Sbjct: 61 LLPNSYSFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNG---RLE 117
Query: 174 CARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGK 233
A +FD R VVS+ +L+ GY RG I+ A K+FDE+ ++VVSW MISG +
Sbjct: 118 DAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCN 177
Query: 234 SRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVS 293
++AL L+ +M + V D+ +V +SACA+ G ++LG+ +HS++E++ G +
Sbjct: 178 FKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDH-GFGSN---IK 233
Query: 294 LNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF------- 346
+ N LI +Y+ CGE+E A G+F+ + +++ +SW ++I G +EALL F
Sbjct: 234 IVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSG 293
Query: 347 --------LGVLSACSHGGFVDEGRQFFECMNQNW-GIKPRIEHYGCMVDLFSRAGLMDE 397
L VL AC+H G +D GR +N+ G+ ++D++++ G ++
Sbjct: 294 ESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEA 353
Query: 398 AFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE-IDPEQ 445
A + +M + + + +++ G +H A A + K+ IDP+
Sbjct: 354 AKQVFDSM-LTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDD 401
>gi|359476090|ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Vitis vinifera]
Length = 515
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 166/520 (31%), Positives = 296/520 (56%), Gaps = 33/520 (6%)
Query: 36 LFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHAR 95
L +IH+ ++ S ++++ K++ G A+ +F++ +P+ ++N MIR +
Sbjct: 4 LKKIHAHVVKFSLSXSSFLVTKMVDMCNHHGETEYANLLFKRVADPNAFLYNAMIRAYKH 63
Query: 96 SETPEKSVYLYKQMI-----DKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYC 150
++ ++ ++KQM+ + PD++T+ F++ CA + G+QVHG G
Sbjct: 64 NKVYILAITVHKQMLGHSHGENPXFPDKFTFPFVVKXCAGLMCYNLGKQVHGHAFKFGPK 123
Query: 151 SNVFIRTNLMNLYLMSGGEC-GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKI 209
SN I +L+ +Y+ +C + A +F++M R VSWN+L+ G+V+ G + A I
Sbjct: 124 SNTVIENSLVEMYV----KCDSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQMRRARAI 179
Query: 210 FDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDL 269
F+E+ + + SWT ++SG A+ G AL F M+ + LD+++LV+ L ACA++G L
Sbjct: 180 FEELQDKTIFSWTAIVSGYARIGCHAVALEFFRRMQMVDIELDEISLVSVLPACAQLGAL 239
Query: 270 KLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSM 329
+LGKWIH Y ++ R+ + + NALI +YA G ++E +F KM R+ +SW++M
Sbjct: 240 ELGKWIHIYADKA-GFLRD---ICVCNALIEVYAKRGSMDEGRRLFHKMNERDVISWSTM 295
Query: 330 ITGFAKQGYAQEA---------------LLTFLGVLSACSHGGFVDEGRQFFECMNQNWG 374
I G A G A+EA ++TF+G+LSAC+H G ++EG +FE M ++
Sbjct: 296 IVGLANHGRAREAIELFQEMQKAKVEPNIITFVGLLSACAHAGLLNEGLGYFESMERDDN 355
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVA 434
I+P +EHYGC+V+L +G +D+A L++ MPMKP+ + G L CR H N E+ + +A
Sbjct: 356 IEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSDIWGLLSSSCRSHGNLEIVA-IA 414
Query: 435 QKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLH 494
+ + E++P+ Y+ L +N+YA +W V+ +R+ M + K PG S ++++ ++
Sbjct: 415 MEHLLELEPDDTGNYITL-SNLYADLGKWDGVSRMRKLMSSKYMNKTPGCSSIEVDNMVQ 473
Query: 495 DFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFL 534
++ +GD + + IY+ L + M Q DI E+ +
Sbjct: 474 EYASGDDSKPFSKAIYRVLKLLVMH--QSKMDDDIIEIMV 511
>gi|317106766|dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
Length = 563
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 177/518 (34%), Positives = 300/518 (57%), Gaps = 63/518 (12%)
Query: 34 KTLFQIHSQII--INGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKTENPSTAIWNQM 89
+ L QIH++I+ + S +++++K+L+F S G A K+F + NP +N +
Sbjct: 2 QILRQIHARILTHVPPISSVSFLISKILSFAALSPFGNFDYARKIFSQIPNPGIFAYNSV 61
Query: 90 IRGHARSETPEKS-VYLYKQMIDK-ETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLAS 147
IRG ++ P K ++L+K M+ K P+ +T +F+L C+ EG+Q+H ++L S
Sbjct: 62 IRGCLYTKIPSKEPIHLFKDMVGKGYPNPNTFTMAFVLKACSIIMALEEGKQIHAQILRS 121
Query: 148 GYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAW 207
G+ S+ +++++L+N Y K +I A
Sbjct: 122 GFSSSPYVQSSLVNFY----------------------------------SKCEEITIAR 147
Query: 208 KIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIG 267
K+FDE+ RN+V W+ M+SG A+ G +AL +F EM+ + D+V+LV LSACA +G
Sbjct: 148 KVFDEITERNLVCWSAMVSGYARLGMINEALIMFREMQVVGIEPDEVSLVGVLSACAMVG 207
Query: 268 DLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
L +GKW+H+Y+++ V + LN ALI+MYA CG IE+A +F +M+ +++ +W+
Sbjct: 208 ALDIGKWVHAYIKKRMI----HVDLELNTALINMYAKCGCIEKAREIFDEMRVKDSKAWS 263
Query: 328 SMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQN 372
SMI G A G A++AL +TF+G+LSAC+HGG V +G++++ M +
Sbjct: 264 SMIVGLAIHGLAEDALNVFSRMEEAQAKPNHVTFIGILSACAHGGLVSDGKRYWSSMLE- 322
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQ 432
GI+P +EHYGCMVDL R GL+DEA+ +P P+ + +LL+ + + A
Sbjct: 323 LGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEM 381
Query: 433 VAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGV 492
VA KL+ E++P +A Y+ L AN+YA+ + + V+ VR+ M + G++ PG + ++++G
Sbjct: 382 VAGKLL-ELEPWKAENYIIL-ANLYASVSQLEKVSHVRKMMKENGIKALPGCTSIEVDGF 439
Query: 493 LHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
+H+FV GD ++ +A I KTL ++ ++ + GYKP +S
Sbjct: 440 VHNFVTGDWSHPEAEEIKKTLRDVALKILISGYKPFVS 477
>gi|357133649|ref|XP_003568436.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Brachypodium distachyon]
Length = 610
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 175/525 (33%), Positives = 293/525 (55%), Gaps = 28/525 (5%)
Query: 32 TTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIR 91
+ ++L + H+++I G +Q A L++ Y S L + +F++T +++ ++
Sbjct: 18 SPRSLRRAHARLIKEGLAQHPPAPALLVSAYAKSRLLPDTRLLFDETPRRDLHLYSSLLA 77
Query: 92 GHARSETPEKSVYLYKQMIDKET-EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYC 150
+ SE+PE + L ++M+ + PD + + + S AR G+Q+HG +AS Y
Sbjct: 78 AVSHSESPELVLPLLRRMLSADALRPDHFVLASIASATARLRSLCLGKQLHGHFVASPYS 137
Query: 151 SNVFIRTNLMNLYLMSGGECGV-GCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKI 209
S+ ++++L+++Y +CGV AR +FD + A++ V W +L+ GYV G D A ++
Sbjct: 138 SDDVVKSSLIDMYC----KCGVPDDARKVFDSIVAKNSVMWTALISGYVLNGRSDEALEL 193
Query: 210 FDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQV-ALVAALSACAEIGD 268
F MP R + +WT +ISG ++G+S A+ LF +MRR V +D L +A+ A++
Sbjct: 194 FRSMPGRTLFAWTALISGFVRSGESVSAVKLFVDMRRDGVSIDDAFVLSSAIGGAADLAA 253
Query: 269 LKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTS 328
LG+ +HS +G ++ + NA++ MY+ C +I A VF ++ R+ +SWT+
Sbjct: 254 HVLGRQLHSL---TMRLGFSSSMI-VGNAVVDMYSKCSDIHSAREVFEEITGRDIISWTT 309
Query: 329 MITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNW 373
M+ G A+ G A+EA +TF+G++ ACSH G V +GRQ F+ M +
Sbjct: 310 MLVGEAQHGRAEEAFSLYDRMVLAGVKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKGEY 369
Query: 374 GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQV 433
GI PR++HY C +DL SR+G + EA L+ MP P++A SLL C+ +NNAE++ +V
Sbjct: 370 GINPRLQHYTCYLDLLSRSGHLAEAEELITTMPYVPDEATWASLLSACKKYNNAEMSIRV 429
Query: 434 AQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVL 493
A L+ E+ P+ + Y+ L++NVYA +W V VR+ M M +RK PG SW+++
Sbjct: 430 ADNLL-ELRPKYPSTYV-LLSNVYAVNGKWDSVDTVRKLMADMEIRKEPGYSWIEVGREF 487
Query: 494 HDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
F AG+ I L E+ + Q GY PD S + +EE
Sbjct: 488 RLFHAGEVPIDLREEILGFLEELVSEMRQRGYVPDTSSVMHDLEE 532
>gi|297729323|ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group]
gi|255670427|dbj|BAH95753.1| Os12g0577900, partial [Oryza sativa Japonica Group]
Length = 614
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 178/512 (34%), Positives = 275/512 (53%), Gaps = 64/512 (12%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+HS ++ G + ++ L+ Y +G +A KVF++ WN + R
Sbjct: 150 VHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVR--- 206
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
E + +++ D+ E D +++ +L G + GE
Sbjct: 207 -EGELAGVRKLFDEMPEKDTVSWNTILD-----GYTKAGE-------------------- 240
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
V A LF MP R+VVSW++++ GY K+GD++ A IFD+MP +N+
Sbjct: 241 -------------VEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNL 287
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
V+WT M+S CAQ G +A LF +M+ A V LD A+V+ L+ACAE G L LGK IH Y
Sbjct: 288 VTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRY 347
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF-RKMQRRNTVSWTSMITGFAKQG 337
V + ++GR + NALI M+ CG + A VF + ++++VSW S+I GFA G
Sbjct: 348 VRKR-NLGRS---THVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHG 403
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+ +AL +T + VLSAC+H GFVDEGR+ F M +++GI P+IEHY
Sbjct: 404 HGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHY 463
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
GCM+DL R GL+ EA L+++MP +PN+ + GSLL CR+H N E A ++A ++++
Sbjct: 464 GCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYA-EIAVNELSKLQ 522
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P A Y A+++N+YA A +W D+A R +M G +K G SWV++N H+F GD
Sbjct: 523 PSNAGNY-AVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRK 581
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFL 534
++ + I + + ++ G P EL +
Sbjct: 582 HQDSDQISEMVDRLSSHVKHVGCVPAGHELLV 613
>gi|297817744|ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322593|gb|EFH53014.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 597
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 186/541 (34%), Positives = 288/541 (53%), Gaps = 64/541 (11%)
Query: 18 LTTRQIFSLLQIRNTT-KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFE 76
LT + + LL+ ++ K L +IH+ +I GFS+KN +L +LL V G + A +VF+
Sbjct: 8 LTKQMLSELLRASSSKPKQLKKIHAVVIRTGFSEKNSLLTQLLENLVLVGDMCYARQVFD 67
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
+ P +WN + +G+ R++ P +SV LYK+M D PDE+TY F++ ++ G+
Sbjct: 68 EMPKPRIFLWNTLFKGYVRNQLPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQLGVLPC 127
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKG 196
G +H VL +G+ + T L+ +Y M GE + A LF+ M + +V+WN+
Sbjct: 128 GVSLHAHVLKNGFECLGIVATELVMMY-MKFGE--LSSAEFLFESMQVKDLVAWNAF--- 181
Query: 197 YVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVAL 256
I+ C Q G S AL FN+M V D +
Sbjct: 182 ----------------------------IAVCVQTGNSAIALEYFNKMCADAVQFDSFTV 213
Query: 257 VAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL---VSLNNALIHMYASCGEIEEAYG 313
V+ LSAC ++G L +G EE + R+ + + + NA + M+ CG E A
Sbjct: 214 VSMLSACGQLGSLDIG-------EEIYDRARKEEIECNIIVENARLDMHLKCGSTEAARV 266
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGF 358
+F M++RN VSW++MI G+A G + EAL +TFLGVLSACSH G
Sbjct: 267 LFDDMKQRNVVSWSTMIVGYAMNGDSGEALALFTMMQNEGLRPNYVTFLGVLSACSHAGL 326
Query: 359 VDEGRQFFECMNQ--NWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGS 416
V+EG+++F M + + ++PR EHY CMVDL R+GL++EA+ ++ M ++P+ + G+
Sbjct: 327 VNEGKRYFSLMVRLNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMRVEPDTGIWGA 386
Query: 417 LLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKM 476
LL C +H + L +VA LV E P+ Y L++N+YAAA +W V VR KM K+
Sbjct: 387 LLGACAVHRDMILGQKVADVLV-ETAPD-IGSYHVLLSNIYAAAGKWDCVDKVRSKMRKL 444
Query: 477 GVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGI 536
G +K S V+ +G +H F GD ++ Q+ IY+ L EI + GY PD +F +
Sbjct: 445 GTKKVAAYSSVEFDGKIHFFNRGDISHPQSKAIYEKLDEILKKIRNMGYVPDTGSVFHDV 504
Query: 537 E 537
E
Sbjct: 505 E 505
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 181/499 (36%), Positives = 268/499 (53%), Gaps = 39/499 (7%)
Query: 60 AFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEY 119
A VTSG+L S + N +IR A S P ++ LY ++ P +
Sbjct: 159 AALVTSGWL-----------RRSADLHNALIRALAGSARPHLALPLYAHLLRAGHHPTPH 207
Query: 120 TYSFLLSVCARC----GLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCA 175
T LL A G VH + G + + L+ ++ +G + A
Sbjct: 208 TLPSLLKSLALSPAVPGARGLALAVHAHAVKLGLAGFLLVSNALIRVH--AGILGRLSDA 265
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
+L + ++N+L+ Y + G + A +FDEMP RN VSW+ M++G Q G R
Sbjct: 266 LVLLRTAASVDASTFNTLITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGR 325
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
+AL LF M+ V D LV L+ACA++G L+ GKW+H Y++ N + V L
Sbjct: 326 EALGLFARMQADGVRPDDTVLVGVLAACAQLGVLEQGKWVHGYLKAN----NIRITVFLG 381
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------ 343
AL+ MYA CGE++ A VF+ M+ +N ++WT+MI G A G EAL
Sbjct: 382 TALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVK 441
Query: 344 ---LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFS 400
+ F+G L AC+H G VD+GR+ F+ M + +GIKP+IEHYGCMVDL +R GL++EA
Sbjct: 442 PDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEARE 501
Query: 401 LVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAA 460
+V+ MPMKP+ + G+L+ GCR H N ELA V + + E++P+++ Y+ L+ N+YAA+
Sbjct: 502 MVEKMPMKPDALIWGALMAGCRFHKNVELAEYVVKHWI-ELEPDKSGAYV-LLGNIYAAS 559
Query: 461 KRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQA 520
R +R M + GV K PG S V+I GV+H F+ GD ++ I EI +
Sbjct: 560 GRHASAREIRHLMREKGVDKTPGCSTVEIKGVIHQFIVGDLSHPFIEEILSKWDEIDSRI 619
Query: 521 -MQEGYKPDISELFLGIEE 538
++EGY PD E+ L IEE
Sbjct: 620 RLEEGYVPDKKEVLLDIEE 638
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 127/277 (45%), Gaps = 40/277 (14%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
L+ Y +G + +A +F++ + W+ M+ G+ ++ +++ L+ +M PD
Sbjct: 283 LITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPD 342
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCAR 176
+ +L+ CA+ G+ +G+ VHG + A+ VF+ T L+++Y +CG + A
Sbjct: 343 DTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMY----AKCGEMQLAM 398
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
+F M ++V++W +++K G A +G+ +
Sbjct: 399 EVFKVMKEKNVLAWTTMIK-------------------------------GLAMHGRGSE 427
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
AL LF++M R V D +A + AL AC G + G+ + + + + + +
Sbjct: 428 ALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPK---IEHYG 484
Query: 297 ALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITG 332
++ + A G + EA + KM + + + W +++ G
Sbjct: 485 CMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAG 521
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 102/260 (39%), Gaps = 28/260 (10%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H + N ++ L+ Y G + A +VF+ + + W MI+G A
Sbjct: 365 VHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGR 424
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ----------VHGRVLASG 148
+++ L+ QM +PD+ + L C GL +G + + ++ G
Sbjct: 425 GSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYG 484
Query: 149 YCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPAR-SVVSWNSLLKGYVKRGDIDGA- 206
++ R L+N AR + + MP + + W +L+ G +++ A
Sbjct: 485 CMVDLLARNGLLNE------------AREMVEKMPMKPDALIWGALMAGCRFHKNVELAE 532
Query: 207 --WKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACA 264
K + E+ ++ + + A +G+ A + + MR G+D+ + +
Sbjct: 533 YVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREK--GVDKTPGCSTVEIKG 590
Query: 265 EIGDLKLGKWIHSYVEENFS 284
I +G H ++EE S
Sbjct: 591 VIHQFIVGDLSHPFIEEILS 610
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 179/538 (33%), Positives = 289/538 (53%), Gaps = 34/538 (6%)
Query: 25 SLLQIRNTTKTL---FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENP 81
SLL NT + L +IHS I G + L+ Y + +A + F++
Sbjct: 285 SLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKR 344
Query: 82 STAIWNQMIRGHARS-----ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
W+ MI G+A+S E+ ++ L ++M + P++ T+ +L C+ G +
Sbjct: 345 DVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQ 404
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLK 195
G Q+H + G+ S+ ++T + N+Y +CG + A +F M ++VV+W SLL
Sbjct: 405 GRQIHAEISKVGFESDRSLQTAIFNMY----AKCGSIYEAEQVFSKMENKNVVAWASLLT 460
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVA 255
Y+K GD+ A K+F EM RNVVSW MI+G AQ+G + L + M+ D+V
Sbjct: 461 MYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVT 520
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
+++ L AC + L+ GK +H+ E +G E V + +LI MY+ CGE+ EA VF
Sbjct: 521 IISILEACGALSALERGKLVHA---EAVKLGLESDTV-VATSLIGMYSKCGEVTEARTVF 576
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVD 360
K+ R+TV+W +M+ G+ + G EA+ +TF V+SAC G V
Sbjct: 577 DKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQ 636
Query: 361 EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
EGR+ F M +++ +KP +HYGCMVDL RAG + EA +Q MP +P+ +V +LL
Sbjct: 637 EGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGA 696
Query: 421 CRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRK 480
C+ H+N +LA A ++ ++P A+ Y+ L +N+YA A RW D VR+ M G++K
Sbjct: 697 CKSHDNVQLAEWAAHHIL-RLEPSNASVYVTL-SNIYAQAGRWDDSTKVRKVMDDKGLKK 754
Query: 481 PPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
G+S ++I+G +H FVA D + + I+ L +T + + GY PD+ + ++E
Sbjct: 755 DRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPDMRFVLHDVDE 812
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/463 (26%), Positives = 213/463 (46%), Gaps = 74/463 (15%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H Q+ G + Y+ L+ FY G + + +VF + W+ MI +A +
Sbjct: 100 VHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNH 159
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
P K+ +++M D EP+ T+ +L C + + ++H V ASG ++V + T
Sbjct: 160 PAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATA 219
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
L+ +Y K G+I A +IF +M RNV
Sbjct: 220 LITMY----------------------------------SKCGEISLACEIFQKMKERNV 245
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
VSWT +I AQ+ K +A L+ +M +A + + V V+ L++C L G+ IHS+
Sbjct: 246 VSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSH 305
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ E G E +V + NALI MY C I++A F +M +R+ +SW++MI G+A+ GY
Sbjct: 306 ISER---GLETDVV-VANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGY 361
Query: 339 A-QEAL-------------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
+E+L +TF+ +L ACS G +++GRQ +++ G +
Sbjct: 362 QDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISK-VGFESD 420
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLL---LGCRIHNNAELASQVAQ 435
+ +++++ G + EA + M K N SLL + C +L S A+
Sbjct: 421 RSLQTAIFNMYAKCGSIYEAEQVFSKMENK-NVVAWASLLTMYIKC-----GDLTS--AE 472
Query: 436 KLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
K+ +E+ + ++A YA + D+A V + + M V
Sbjct: 473 KVFSEMSTRNVVSWNLMIAG-YAQSG---DIAKVFELLSSMKV 511
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 170/391 (43%), Gaps = 69/391 (17%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH+ + +G + L+ Y G + A ++F+K + + W +I+ +A+
Sbjct: 200 EIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHR 259
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++ LY++M+ P+ T+ LL+ C G ++H + G ++V +
Sbjct: 260 KLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVAN 319
Query: 158 NLMNLYLMSGGECGVGC---ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP 214
L+ +Y C C AR FD M R V+SW++++ GY + G D + DE+
Sbjct: 320 ALITMY------CKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDK--ESLDEV- 370
Query: 215 HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKW 274
L MRR V ++V ++ L AC+ G L+ G+
Sbjct: 371 -----------------------FQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQ 407
Query: 275 IHSYVEE-NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF 333
IH+ + + F R SL A+ +MYA CG I EA VF KM+ +N V+W S++T +
Sbjct: 408 IHAEISKVGFESDR-----SLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMY 462
Query: 334 AKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAG 393
K C G + F E +N + + M+ ++++G
Sbjct: 463 IK-----------------C--GDLTSAEKVFSEMSTRN------VVSWNLMIAGYAQSG 497
Query: 394 LMDEAFSLVQNMPM---KPNDAVLGSLLLGC 421
+ + F L+ +M + +P+ + S+L C
Sbjct: 498 DIAKVFELLSSMKVEGFQPDRVTIISILEAC 528
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 166/408 (40%), Gaps = 94/408 (23%)
Query: 120 TYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLF 179
TY ++ CA+ F +G+ VH ++ G ++++ +L+N Y G V +F
Sbjct: 80 TYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFG---DVASVEQVF 136
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
M R VV+W+S++ Y A N +A
Sbjct: 137 RRMTLRDVVTWSSMIAAY-------------------------------AGNNHPAKAFD 165
Query: 240 LFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
F M+ A + +++ ++ L AC L+ + IH+ V+ + G E V++ ALI
Sbjct: 166 TFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKAS---GME-TDVAVATALI 221
Query: 300 HMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------L 344
MY+ CGEI A +F+KM+ RN VSWT++I A+ EA +
Sbjct: 222 TMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAV 281
Query: 345 TFLGVLSACSHGGFVDEGRQFFECMNQNWGI----------------------------- 375
TF+ +L++C+ ++ GR+ +++ G+
Sbjct: 282 TFVSLLNSCNTPEALNRGRRIHSHISER-GLETDVVVANALITMYCKCNCIQDARETFDR 340
Query: 376 --KPRIEHYGCMVDLFSRAGL-----MDEAFSLVQNMPMK---PNDAVLGSLLLGCRIHN 425
K + + M+ ++++G +DE F L++ M + PN S+L C +H
Sbjct: 341 MSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHG 400
Query: 426 NAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKM 473
E Q+ + ++++ E + N+YA + V KM
Sbjct: 401 ALEQGRQIHAE-ISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKM 447
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 93/189 (49%), Gaps = 20/189 (10%)
Query: 232 GKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL 291
G+ ++A+ L +++ + ++ + CA++ + GK +H ++E +G +
Sbjct: 57 GRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDE---LGL-AID 112
Query: 292 VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------- 343
+ L N+LI+ Y+ G++ VFR+M R+ V+W+SMI +A + +A
Sbjct: 113 IYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKD 172
Query: 344 -------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMD 396
+TFL +L AC++ +++ R+ + + G++ + ++ ++S+ G +
Sbjct: 173 ANIEPNRITFLSILKACNNYSMLEKAREIHTVVKAS-GMETDVAVATALITMYSKCGEIS 231
Query: 397 EAFSLVQNM 405
A + Q M
Sbjct: 232 LACEIFQKM 240
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 174/513 (33%), Positives = 274/513 (53%), Gaps = 57/513 (11%)
Query: 44 IINGFSQKNYI-LAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKS 102
+ + SQ++ + L+ Y + G + +A KVF+ WN MI G+ + E++
Sbjct: 140 VFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEA 199
Query: 103 VYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNL 162
+ L+K+M+ PDE T +LS CA+ G G ++H
Sbjct: 200 LELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIH--------------------- 238
Query: 163 YLMSGGECGVGCARLLFDDMPA--RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVS 220
L DD S+ N+ + Y K GD++ A +F+ + ++VVS
Sbjct: 239 --------------TLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVS 284
Query: 221 WTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVE 280
W T+I G ++AL LF EM R+ + V +++ L ACA +G + +G+WIH Y++
Sbjct: 285 WNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYID 344
Query: 281 ENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQ 340
+ +L +LI MYA CG+IE A+ VF M ++ SW +MI GFA G A
Sbjct: 345 KRLKGVTNGS--ALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRAN 402
Query: 341 EAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCM 385
A +T +G+LSACSH G +D GR F+ + Q++ I P++EHYGCM
Sbjct: 403 AAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCM 462
Query: 386 VDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQ 445
+DL AGL EA ++ MPM+P+ + SLL C++H N ELA AQKL+ EI+PE
Sbjct: 463 IDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLM-EIEPEN 521
Query: 446 AAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQ 505
+ Y+ L++N+YA A RW+DVA +R+ + G++K PG S ++I+ V+H+F+ GD + Q
Sbjct: 522 SGSYV-LLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQ 580
Query: 506 ASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ IY+ L E+ + + G+ PD SE+ +EE
Sbjct: 581 SREIYRMLEEMDVLLEEAGFVPDTSEVLQEMEE 613
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/426 (32%), Positives = 225/426 (52%), Gaps = 27/426 (6%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGY---LINAHKVFEKTENPSTAIWNQMIRGHARS 96
H+Q++ G NY L+KLL V S + L A VFE + P+ IWN M+RG A S
Sbjct: 2 HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
+ +Y +M+ P+ YT+ FLL CA+ F EG Q+H +V+ G + +
Sbjct: 62 SDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAH 121
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
T+L+++Y +G + AR +FD R VVS +L+ GY RGD+ A K+FD + R
Sbjct: 122 TSLISMYARNG---RLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITER 178
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
+VVSW MI+G +N +AL LF EM R V D+ LV+ LSACA+ G ++LG+ IH
Sbjct: 179 DVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIH 238
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+ V+++ G +V NA I +Y+ CG++E A G+F + ++ VSW ++I G+
Sbjct: 239 TLVDDHHGFGSSLKIV---NAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHM 295
Query: 337 GYAQEALLTF---------------LGVLSACSHGGFVDEGRQFFECMNQNW-GIKPRIE 380
+EALL F L VL AC+H G +D GR +++ G+
Sbjct: 296 NLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSA 355
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
++D++++ G ++ A + +M M + + +++ G +H A A + ++
Sbjct: 356 LRTSLIDMYAKCGDIEAAHQVFNSM-MHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKN 414
Query: 441 -IDPEQ 445
I+P+
Sbjct: 415 GIEPDD 420
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 187/555 (33%), Positives = 297/555 (53%), Gaps = 65/555 (11%)
Query: 4 EEIIPANPATSSKALTTRQIFSLLQIRNTTKT--LFQIHSQIIINGFSQKNYILAKLLAF 61
+IP +T + L+ + I LL + TT L Q H+ I+ G Q +YI L+
Sbjct: 37 HHLIPNGHSTETSKLSHKAILHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKS 96
Query: 62 YV---TSGYLI--NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEP 116
Y T+ YL ++ +VF+ P+ +WN MI+ + P K++ LY +M+ P
Sbjct: 97 YANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRP 156
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCAR 176
++YTY +L C+ G+ EG QVH ++ G + I ++ + +Y G + AR
Sbjct: 157 NKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGR---LVEAR 213
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
+ DD K G++D MP R GC +
Sbjct: 214 RILDD-----------------KGGEVDAVC-----MPDRK---------GCFM-----E 237
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
AL +F++M++ ++ + L + LSACA +G L G+WIH+Y + N S+ + VL
Sbjct: 238 ALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRN-SIQLDGVL---GT 293
Query: 297 ALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------L 344
+L+ MYA CG I+ A+ VF KM + SW +MI G A G A++A+ +
Sbjct: 294 SLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMDINPNEI 353
Query: 345 TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQN 404
TF+GVL+AC+HGG V +G F M + +G++P+IEHYGC+VDL RAGL+ EA +V +
Sbjct: 354 TFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSS 413
Query: 405 MPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQ 464
+P +P AV G+LL CR H N EL +V K++ E++P Q +G L++N+YA A RW+
Sbjct: 414 IPTEPTPAVWGALLGACRKHGNVELGERVG-KILLELEP-QNSGRYTLLSNIYAKAGRWE 471
Query: 465 DVAAVRQKMIKMGVRKPPGQSWVQI-NGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQE 523
+V VR+ M + G++ PG S + + G +H F+ GD ++ Q IY+ L ++ + E
Sbjct: 472 EVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQME 531
Query: 524 GYKPDISELFLGIEE 538
GY+PD S++ I+E
Sbjct: 532 GYEPDPSQVLFDIDE 546
>gi|186478293|ref|NP_172391.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099767|sp|O80488.1|PPR23_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09190
gi|3249103|gb|AAC24086.1| Contains similarity to membrane-associated salt-inducible protein
homolog TM021B04.10 gb|2191192 from A. thaliana BAC
gb|AF007271 [Arabidopsis thaliana]
gi|28393182|gb|AAO42022.1| unknown protein [Arabidopsis thaliana]
gi|332190289|gb|AEE28410.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 484
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 181/486 (37%), Positives = 274/486 (56%), Gaps = 30/486 (6%)
Query: 21 RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLIN---AHKVFEK 77
R++ LL NT L +IH+ ++ + N +LA F G L N A++VF
Sbjct: 5 RKLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAH---FISICGSLSNSDYANRVFSH 61
Query: 78 TENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+NP+ ++N MI+ ++ P +S+ + M + DEYTY+ LL C+ R G
Sbjct: 62 IQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFG 121
Query: 138 EQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGY 197
+ VHG ++ +G+ IR ++ LY SGG +G A+ +FD+M R+VV WN +++G+
Sbjct: 122 KCVHGELIRTGFHRLGKIRIGVVELY-TSGGR--MGDAQKVFDEMSERNVVVWNLMIRGF 178
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
GD++ +F +M R++VSW +MIS ++ G+ R+AL LF EM D+ +V
Sbjct: 179 CDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVV 238
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
L A +G L GKWIHS E S G +++ NAL+ Y G++E A +FRK
Sbjct: 239 TVLPISASLGVLDTGKWIHSTAE---SSGLFKDFITVGNALVDFYCKSGDLEAATAIFRK 295
Query: 318 MQRRNTVSWTSMITGFAKQGYAQ------EALL----------TFLGVLSACSHGGFVDE 361
MQRRN VSW ++I+G A G + +A++ TFLGVL+ CS+ G V+
Sbjct: 296 MQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVER 355
Query: 362 GRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGC 421
G + F M + + ++ R EHYG MVDL SR+G + EAF ++NMP+ N A+ GSLL C
Sbjct: 356 GEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSAC 415
Query: 422 RIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKP 481
R H + +LA A +LV +I+P + Y+ L++N+YA RWQDV VR M K +RK
Sbjct: 416 RSHGDVKLAEVAAMELV-KIEPGNSGNYV-LLSNLYAEEGRWQDVEKVRTLMKKNRLRKS 473
Query: 482 PGQSWV 487
GQS +
Sbjct: 474 TGQSTI 479
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 187/578 (32%), Positives = 302/578 (52%), Gaps = 62/578 (10%)
Query: 11 PATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLIN 70
P T ++A SL+ T L QIH+QIII+ S + I +L++ + +
Sbjct: 76 PTTPTEA----HFISLIHGSKTILQLHQIHAQIIIHNLSSSSLITTQLISSSSLRKSINH 131
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
+ VF + + +N +IRG + +++ ++ M+ +PD TY F+L A
Sbjct: 132 SLAVFNHHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLKSMA- 190
Query: 131 CGLFRE--GEQVHGRVLASGYCSNVFIRTNLMNLYL------------------------ 164
GLF G +H +L G + F+R +L+++Y+
Sbjct: 191 -GLFSTELGMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSS 249
Query: 165 ------MSGGECGVGC---ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
+ G C G A LF MP + VSW++L+ G+ K GD+D A ++FD+MP
Sbjct: 250 ALLWNVLIKGCCKAGSMKKAVKLFKAMPKKENVSWSTLIDGFAKNGDMDRAMELFDQMPE 309
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
+NVVSWTTM+ G ++NG S +ALS+F++M V + +V+ALSACA+IG L+ G I
Sbjct: 310 KNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRI 369
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
H Y+++N E +L AL+ MYA CG IE A VF + ++++ +WT MI G+A
Sbjct: 370 HKYIKDNGLHLTE----ALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAI 425
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
G++++A+ + FL +L+AC H G VD G FF+ M ++ I+P ++
Sbjct: 426 HGHSEQAIACFKQMMFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMK 485
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HY +VD+ R+G + EA ++ MPM P+ + G+L CR H ++A KL+ +
Sbjct: 486 HYTLIVDMLGRSGQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKFALNKLL-K 544
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
++P Y+ L +N YAA +W+D VR M GV K G S +++ G +H FV+GD
Sbjct: 545 LEPTHTGNYIFL-SNAYAALGQWEDAERVRVLMQNRGVHKNSGWSCIEVEGQVHRFVSGD 603
Query: 501 STYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+K + I L EI A+++GY P + +E+
Sbjct: 604 HDHKDSKAICLKLEEIMAGAVKQGYIPGTEWVLHNMEQ 641
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 172/497 (34%), Positives = 271/497 (54%), Gaps = 55/497 (11%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
L+ YV+ G L +A ++F++ WN MI G+ +S E+++ + +M + P+
Sbjct: 203 LITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPN 262
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
+ T +LS C G+ + V +G+ SN+ +
Sbjct: 263 KSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLT--------------------- 301
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
N+L+ Y K G+ D A ++FD + ++V+SW TMI G + +A
Sbjct: 302 -------------NALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEA 348
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
L+LF M R+ V + V + L ACA +G L LGKW+H+Y+++N R SL +
Sbjct: 349 LALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNL---RNSSNASLWTS 405
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------------- 343
LI MYA CG IE A VFR M RN SW +M++GFA G+A+ AL
Sbjct: 406 LIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRP 465
Query: 344 --LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
+TF+GVLSAC+ G VD G Q+F M Q++GI P+++HYGCM+DL +RA +EA L
Sbjct: 466 DDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEIL 525
Query: 402 VQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAK 461
++NM M+P+ A+ GSLL C+ H E VA++L +++PE AG L++N+YA A
Sbjct: 526 MKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLF-QLEPEN-AGAFVLLSNIYAGAG 583
Query: 462 RWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAM 521
RW DVA +R ++ G++K PG + ++I+G +H+F+ GD + + + IYK L E+
Sbjct: 584 RWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLLE 643
Query: 522 QEGYKPDISELFLGIEE 538
+ G+ P+ SE+ ++E
Sbjct: 644 ENGFVPNTSEVLYDMDE 660
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 143/450 (31%), Positives = 240/450 (53%), Gaps = 30/450 (6%)
Query: 11 PATSS--KALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--G 66
PA+ K L +LL+ T QIHS II G + ++ +KL+ F S G
Sbjct: 17 PASDPPYKILEQHPYLNLLEKCKNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSG 76
Query: 67 YLINAHKVFEKTE---NPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSF 123
L A +FE+ + + IWN +IRG++ S +P S++L+ +M+ +P+ +T+ F
Sbjct: 77 DLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPF 136
Query: 124 LLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMP 183
L C + EG+Q+H L N + T+++++Y S GE + ARL+FD
Sbjct: 137 LFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMY-ASVGE--MDFARLVFDKSS 193
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
R VS+ +L+ GYV +G +D A ++FDE+P ++VVSW MISG Q+G+ +A+ F E
Sbjct: 194 LRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYE 253
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
M+ A V ++ +V LSAC +LGKWI S+V +N G + L NALI MY
Sbjct: 254 MQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDN-GFGSN---LQLTNALIDMYC 309
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLG 348
CGE + A +F ++ ++ +SW +MI G++ +EAL +TFLG
Sbjct: 310 KCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLG 369
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
+L AC+ G +D G+ +++N + ++D++++ G ++ A + ++M +
Sbjct: 370 ILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSR 429
Query: 409 PNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
N A ++L G +H +AE A + ++V
Sbjct: 430 -NLASWNAMLSGFAMHGHAERALALFSEMV 458
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 181/499 (36%), Positives = 267/499 (53%), Gaps = 39/499 (7%)
Query: 60 AFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEY 119
A VTSG+L S + N +IR A S P ++ LY ++ P +
Sbjct: 159 AALVTSGWL-----------RRSADLHNALIRALAGSARPHLALPLYAHLLRAGHHPTPH 207
Query: 120 TYSFLLSVCARC----GLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCA 175
T LL A G VH + G + + L+ ++ G + A
Sbjct: 208 TLPSLLKSLALSPAVPGARGLALAVHAHAVKLGLAGFLLVSNALIRVHAGILGR--LSDA 265
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
+L + ++N+L+ Y + G + A +FDEMP RN VSW+ M++G Q G R
Sbjct: 266 LVLLRTAASVDASTFNTLITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGR 325
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
+AL LF M+ V D LV L+ACA++G L+ GKW+H Y++ N + V L
Sbjct: 326 EALGLFARMQADGVRPDDTVLVGVLAACAQLGVLEQGKWVHGYLKAN----NIRITVFLG 381
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------ 343
AL+ MYA CGE++ A VF+ M+ +N ++WT+MI G A G EAL
Sbjct: 382 TALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVK 441
Query: 344 ---LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFS 400
+ F+G L AC+H G VD+GR+ F+ M + +GIKP+IEHYGCMVDL +R GL++EA
Sbjct: 442 PDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEARE 501
Query: 401 LVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAA 460
+V+ MPMKP+ + G+L+ GCR H N ELA V + + E++P+++ Y+ L+ N+YAA+
Sbjct: 502 MVEKMPMKPDALIWGALMAGCRFHKNVELAEYVVKHWI-ELEPDKSGAYV-LLGNIYAAS 559
Query: 461 KRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQA 520
R +R M + GV K PG S V+I GV+H F+ GD ++ I EI +
Sbjct: 560 GRHASAREIRHLMREKGVDKTPGCSTVEIKGVIHQFIVGDLSHPFIEEILSKWDEIDSRI 619
Query: 521 -MQEGYKPDISELFLGIEE 538
++EGY PD E+ L IEE
Sbjct: 620 RLEEGYVPDKKEVLLDIEE 638
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 127/277 (45%), Gaps = 40/277 (14%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
L+ Y +G + +A +F++ + W+ M+ G+ ++ +++ L+ +M PD
Sbjct: 283 LITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPD 342
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCAR 176
+ +L+ CA+ G+ +G+ VHG + A+ VF+ T L+++Y +CG + A
Sbjct: 343 DTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMY----AKCGEMQLAM 398
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
+F M ++V++W +++KG A +G+ +
Sbjct: 399 EVFKVMKEKNVLAWTTMIKGL-------------------------------AMHGRGSE 427
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
AL LF++M R V D +A + AL AC G + G+ + + + + + +
Sbjct: 428 ALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPK---IEHYG 484
Query: 297 ALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITG 332
++ + A G + EA + KM + + + W +++ G
Sbjct: 485 CMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAG 521
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 102/260 (39%), Gaps = 28/260 (10%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H + N ++ L+ Y G + A +VF+ + + W MI+G A
Sbjct: 365 VHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGR 424
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ----------VHGRVLASG 148
+++ L+ QM +PD+ + L C GL +G + + ++ G
Sbjct: 425 GSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYG 484
Query: 149 YCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPAR-SVVSWNSLLKGYVKRGDIDGA- 206
++ R L+N AR + + MP + + W +L+ G +++ A
Sbjct: 485 CMVDLLARNGLLNE------------AREMVEKMPMKPDALIWGALMAGCRFHKNVELAE 532
Query: 207 --WKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACA 264
K + E+ ++ + + A +G+ A + + MR G+D+ + +
Sbjct: 533 YVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREK--GVDKTPGCSTVEIKG 590
Query: 265 EIGDLKLGKWIHSYVEENFS 284
I +G H ++EE S
Sbjct: 591 VIHQFIVGDLSHPFIEEILS 610
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 170/519 (32%), Positives = 279/519 (53%), Gaps = 57/519 (10%)
Query: 26 LLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI 85
LLQ L Q+H+ II++G+ + +L KLL +G + ++F NP + +
Sbjct: 18 LLQAGPRLYLLHQVHAHIIVSGYGRSRSLLTKLLNLACAAGSISYTRQIFLAVPNPDSFL 77
Query: 86 WNQMIRGHARSETPE-KSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRV 144
+ +I+ ++S S+Y Y +M+ P YT++ ++ CA + G VHG V
Sbjct: 78 FTSLIKSTSKSHNFSIYSLYFYSRMVLSNVSPSNYTFTSVIKSCADLSALKHGRVVHGHV 137
Query: 145 LASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDID 204
L G+ +V+++ L+ LY G+CG D+
Sbjct: 138 LVHGFGLDVYVQAALVALY----GKCG------------------------------DLI 163
Query: 205 GAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACA 264
A K+FD++ R++V+W +MISG QNG +++A+ LF+ M+ V D V+ LSACA
Sbjct: 164 NARKVFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACA 223
Query: 265 EIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTV 324
+G LG W+H Y+ N G + + V L +LI+MY CG + +A VF M+ RN V
Sbjct: 224 HLGAFSLGCWVHEYIVGN---GLD-LNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVV 279
Query: 325 SWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECM 369
+WT+MI+G+ GY +A+ +TF+ VLSAC+H G V+EGR+ F +
Sbjct: 280 AWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEGRRLFASI 339
Query: 370 NQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV-QNMPMKPNDAVLGSLLLGCRIHNNAE 428
+ + + P +EH C+VD+ RAGL+DEA++ + + +P P A+L ++L C++H N +
Sbjct: 340 REEYHLVPGVEHNVCLVDMLGRAGLLDEAYNFIKEEIPENPAPAILTAMLGACKMHKNFD 399
Query: 429 LASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
L +QVA+ L+A +PE A Y+ L +N+YA A R V VR MI+ ++K G S V+
Sbjct: 400 LGAQVAEHLLAA-EPENPAHYVIL-SNIYALAGRMDQVEIVRNNMIRKCLKKQVGYSTVE 457
Query: 489 INGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
++ + F GD ++ + + IY L E+ + + GY P
Sbjct: 458 VDQKTYLFSMGDKSHSETNAIYHYLDELMWKCSEAGYVP 496
>gi|356553601|ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Glycine max]
Length = 534
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 179/518 (34%), Positives = 290/518 (55%), Gaps = 26/518 (5%)
Query: 15 SKALTTRQIFSLLQIRNTT-KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLIN-AH 72
+K ++ + ++LQ + T K L +IH+ II G + +++L F +S IN A+
Sbjct: 19 AKFISDQPCLTMLQTQCTNMKDLQKIHAHIIKTGLAHHTVAASRVLTFCASSSGDINYAY 78
Query: 73 KVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCG 132
+F +P+ WN +IRG +RS TP ++ L+ M+ P TY + A+ G
Sbjct: 79 LLFTTIPSPNLYCWNTIIRGFSRSSTPHLAISLFVDMLCSSVLPQRLTYPSVFKAYAQLG 138
Query: 133 LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNS 192
+G Q+HGRV+ G + FI+ ++ +Y SG + AR +FD++ VV+ NS
Sbjct: 139 AGYDGAQLHGRVVKLGLEKDQFIQNTIIYMYANSGL---LSEARRVFDELVDLDVVACNS 195
Query: 193 LLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLD 252
++ G K G++D + ++FD MP R V+W +MISG +N + +AL LF +M+ RV
Sbjct: 196 MIMGLAKCGEVDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEALELFRKMQGERVEPS 255
Query: 253 QVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAY 312
+ +V+ LSACA +G LK G+W+H YV+ G + V + A+I MY CG I +A
Sbjct: 256 EFTMVSLLSACAHLGALKHGEWVHDYVKR----GHFELNVIVLTAIIDMYCKCGVIVKAI 311
Query: 313 GVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGG 357
VF R W S+I G A GY ++A+ ++F+GVL+AC + G
Sbjct: 312 EVFEASPTRGLSCWNSIIIGLALNGYERKAIEYFSKLEASDLKPDHVSFIGVLTACKYIG 371
Query: 358 FVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSL 417
V + R +F M + I+P I+HY CMV++ +A L++EA L++ MP+K + + GSL
Sbjct: 372 AVGKARDYFSLMMNKYEIEPSIKHYTCMVEVLGQAALLEEAEQLIKGMPLKADFIIWGSL 431
Query: 418 LLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMG 477
L CR H N E+A + AQ+ V E++P A+GYL L++NV AA+ ++++ R M +
Sbjct: 432 LSSCRKHGNVEIAKRAAQR-VCELNPSDASGYL-LMSNVQAASNQFEEAMEQRILMRERL 489
Query: 478 VRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGE 515
K PG S +++ G +H+F+AG + +A IY L +
Sbjct: 490 AEKEPGCSSIELYGEVHEFLAGGRLHPKAREIYYLLND 527
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 172/519 (33%), Positives = 290/519 (55%), Gaps = 28/519 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH+QI+ +G +Q + LL Y L +AH +F++ W ++ + +++
Sbjct: 23 KIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAYNQAK 82
Query: 98 TPEKSVYLYKQMIDKE-TEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
P K++ ++ M + +PD + Y+ LL CA R G+QVH R + S + + ++
Sbjct: 83 LPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVK 142
Query: 157 TNLMNLYLMSGGECGV-GCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
++L+++Y +CG+ AR +FD + ++ VSW ++L GY + G D A ++F P
Sbjct: 143 SSLVDMY----AKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPV 198
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL-DQVALVAALSACAEIGDLKLGKW 274
RN+ SWT +ISG Q+G +F EMRR V + D + L + + ACA + L LGK
Sbjct: 199 RNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQ 258
Query: 275 IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
IH V G E L ++NAL+ MYA C +I A VF +M R+ VSWTS+I G A
Sbjct: 259 IHGLV---IGSGYESCLF-ISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAA 314
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
+ G A+EAL +TF+G++ ACSH G V +GR+ F+ M +++ I P +
Sbjct: 315 QHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSL 374
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
+ + C +DL SR+G ++EA L++ MP KP++ +LL C+ H N E+ ++A +L++
Sbjct: 375 QLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADRLLS 434
Query: 440 EIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG 499
++ + + Y+ L++NVYA A +W+ ++ VR+ M M V++ PG S + + F AG
Sbjct: 435 -LNMHEPSTYV-LLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSIDLGKESQVFHAG 492
Query: 500 DSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++ + I+ L E+ + + GY PD S + +EE
Sbjct: 493 ETCHPMKDEIFGLLKELDAEMRKRGYIPDTSYVLHDMEE 531
>gi|297820424|ref|XP_002878095.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323933|gb|EFH54354.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 651
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 180/529 (34%), Positives = 280/529 (52%), Gaps = 59/529 (11%)
Query: 21 RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKT 78
R I +LQ N+ L +IHS +IING I LL F S G L A +F++
Sbjct: 6 RVIVRMLQGCNSMNKLRKIHSHVIINGLHHHPSIFNHLLRFCAVSVNGSLSYAQLLFDRF 65
Query: 79 E-NPSTAIWNQMIRGHARSETPEKSVYLYKQMI-DKETEPDEYTYSFLLSVCARCGLFRE 136
+ +PST+ WN +IRG + S +P ++ Y +M+ + PD +T+SF L C R L +
Sbjct: 66 DSDPSTSAWNYLIRGFSISSSPLYTILYYNRMLLSSVSRPDIFTFSFALKACERIRLIPK 125
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKG 196
++HG V+ SG+ ++ + TNL ++
Sbjct: 126 CLELHGSVIRSGFLADAIVSTNL----------------------------------VRC 151
Query: 197 YVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVAL 256
Y G ++ A K+FDEMP R++VSW MIS + G QA S+++ M V +D +
Sbjct: 152 YSANGSVEIASKVFDEMPVRDLVSWNAMISCFSHAGLHHQAFSMYSRMANEGVCVDAYTI 211
Query: 257 VAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFR 316
VA LS+CA + L +G +H + R V + NALI MYA CG +E A GVF+
Sbjct: 212 VALLSSCAHVSALNMGVMLHRIACDI----RCESSVFVCNALIDMYAKCGSLENAVGVFK 267
Query: 317 KMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDE 361
M++R+ ++W SMI G+ G+ EA+ +TFLG+L CSH G V E
Sbjct: 268 GMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAVTFLGLLLGCSHQGLVKE 327
Query: 362 GRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGC 421
G + FE M+ + + P ++HYGCMVDLF RAG +++A ++ + + +LL C
Sbjct: 328 GVEHFEIMSSQFHLTPNVKHYGCMVDLFGRAGQLEKALEMIHTSSCHEDPVLWRTLLGSC 387
Query: 422 RIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKP 481
+IH N EL +VA K + +++ A Y+ L+ ++Y+AA Q A++R+ + +R
Sbjct: 388 KIHRNLELG-EVAMKKLVQLEAFNAGDYV-LMTSIYSAANDAQGFASMRKLIRSHDLRTI 445
Query: 482 PGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
PG SW++I +H FV D + +++LIY LGE+ +A+ GYKP+ S
Sbjct: 446 PGWSWIEIGDQVHKFVIDDKMHPESALIYSELGEVINRAILAGYKPEDS 494
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 193/556 (34%), Positives = 290/556 (52%), Gaps = 78/556 (14%)
Query: 12 ATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS-----G 66
+T+ + T+ I+ L ++ L IH+ I +G N + K L F + S
Sbjct: 11 STTPEYPLTKCIYLLQFCASSKHKLRXIHAFSIRHGVLLNNPDMGKHLIFTIVSLSAPMS 70
Query: 67 YLIN--------AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDE 118
Y N A+ VF NP+ WN M RG+A S+ P ++ Y+QMI EPD
Sbjct: 71 YAYNVFTWVLSYAYNVFTMIHNPNVFTWNTMTRGYAESDNPSPALRFYRQMIVSRIEPDT 130
Query: 119 YTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLL 178
+TY FLL ++ REGE +H + +G+ S VF++
Sbjct: 131 HTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQ---------------------- 168
Query: 179 FDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQAL 238
NSLL Y GD + A +F+ M R++V+ ++I+G A NG+ +AL
Sbjct: 169 ------------NSLLHIYAACGDTESAHNVFELMRDRDLVAXISVINGFALNGRPSEAL 216
Query: 239 SLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVG-REPVLVSLNNA 297
+LF EM V D +V+ LSA AE+G L+LG+ +H Y+ VG RE V+ N+
Sbjct: 217 TLFREMSAEGVEPDGFTVVSLLSASAELGALELGRRVHVYL---LKVGLRENSHVT--NS 271
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------------- 343
L+ +YA C I E RN VSWTS+I G A G+ +EAL
Sbjct: 272 LLDLYAKCDAIWEX--------ERNAVSWTSLIVGLAVNGFGEEALELFREMEGQGLVPS 323
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
+TF+GVL ACSH G +DEG +F M + +GI PRIEHYGCMVDL SRAGL+ +A+ +
Sbjct: 324 EITFVGVLYACSHCGMLDEGFDYFRRMKEEFGIMPRIEHYGCMVDLLSRAGLVKQAYEYI 383
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKR 462
QNMP++PN +LL C IH + L + A+ + +++P+ + Y+ L++N+Y + R
Sbjct: 384 QNMPVQPNAVTWRTLLGACTIHGHLGLG-ETARSHLLKLEPKHSGDYV-LLSNLYTSECR 441
Query: 463 WQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQ 522
W DV +R+ M+K GV+K G S V++ +++F G+ ++ Q+ +Y L +IT
Sbjct: 442 WADVQLIRRSMLKDGVKKTSGYSLVELGNRVYEFTMGNRSHPQSQDVYALLEKITELLKL 501
Query: 523 EGYKPDISELFLGIEE 538
EGY P + + IEE
Sbjct: 502 EGYVPHTANVLADIEE 517
>gi|413944078|gb|AFW76727.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 794
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 175/520 (33%), Positives = 284/520 (54%), Gaps = 27/520 (5%)
Query: 23 IFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAK-LLAFYVTSGYLINAHKVFEKTENP 81
+F++ ++ IH GF ++ + L+ Y +S L +A K+F++ +
Sbjct: 136 VFAVKAAATSSSPTEAIHCVAFKRGFIGQSVLAGNALVHMYTSSMLLPDARKLFDEMADR 195
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKETE-PDEYTYSFLLSVCARCGLFREGEQV 140
W +I G+AR P+++ ++ +M+ E+ P+E T S + GL G V
Sbjct: 196 DVVSWTTLIDGYARGGLPDEAWRVFCRMVVAESVWPNEVTLVAAASAAGQMGLLGLGRTV 255
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVK 199
H ++ SG +V + L++++ G+CG V A+ +FD MP + V SW S++ Y K
Sbjct: 256 HQCIVESGGRMSVNLENALVDMF----GKCGCVAAAKEVFDGMPIKDVYSWTSMVSAYAK 311
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
GD++ A K+F E+P+RNVVSW+ M++ + +A+ +FN+M A V LV+
Sbjct: 312 CGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVEPIDATLVSV 371
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
LSACA++ L +G W++ + V P +L+NA I M+A CG++ A +F M+
Sbjct: 372 LSACAQLCSLDVGTWLYDTYIVSHKVELTP---NLSNAFIDMFAKCGDVGAASRLFSNME 428
Query: 320 RRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQ 364
+N VSW +MI G +EAL T++GVLSACSHGG V EGR
Sbjct: 429 DKNVVSWNTMIMAHGLHGQPEEALHLFQEFKGNGILPDEATYIGVLSACSHGGLVSEGRC 488
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
F+ M +GI+PR EHY CM+DL + GL+ EAF + ++MP+ ++A G+LL CR+H
Sbjct: 489 HFKEMKIVYGIEPRAEHYACMIDLLGKVGLLQEAFEVARSMPVGADEAGWGALLNACRMH 548
Query: 425 NNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQ 484
N E+ A KL A +DP + Y+ L++ +YA+ +W V +R M V+K PG
Sbjct: 549 GNVEIGKCAADKL-AGLDPSDSGIYV-LMSQIYASKSKWGQVKMLRTVMRDRRVKKNPGC 606
Query: 485 SWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEG 524
S ++++G H+F+ D ++ + IY LG I + + EG
Sbjct: 607 SSIEVDGKCHEFLVADVSHVHSEDIYAALGNIYLHSKAEG 646
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 188/416 (45%), Gaps = 71/416 (17%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAH 72
T+ + T + S+L+ + + L Q+ + + ++G + + ++LLAF S AH
Sbjct: 24 TNCNLVVTHPLLSVLESCASFRRLLQLQALLTVSGLASNRFPASRLLAFCALSDPPRLAH 83
Query: 73 K---VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
+ + TE P+ + M+RG R+ P ++ L+++++ D T F + A
Sbjct: 84 AAAVLAQCTEGPNAYMLATMMRGFLRAGKPTHALTLFRRVLRDRLAVDARTIVFAVKAAA 143
Query: 130 RCGLFREGEQVHGRVLASGYCSNVFIRTN-LMNLYLMSGGECGVGCARLLFDDMPARSVV 188
E +H G+ + N L+++Y S + AR LFD+M R VV
Sbjct: 144 TSS--SPTEAIHCVAFKRGFIGQSVLAGNALVHMYTSS---MLLPDARKLFDEMADRDVV 198
Query: 189 SWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR 248
SW +L+ GY + G D AW++F M VV+ +
Sbjct: 199 SWTTLIDGYARGGLPDEAWRVFCRM----VVAES-------------------------- 228
Query: 249 VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEI 308
V ++V LVAA SA ++G L LG+ +H + E S GR + V+L NAL+ M+ CG +
Sbjct: 229 VWPNEVTLVAAASAAGQMGLLGLGRTVHQCIVE--SGGR--MSVNLENALVDMFGKCGCV 284
Query: 309 EEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFEC 368
A VF M ++ SWTSM++ +AK G + A + F E
Sbjct: 285 AAAKEVFDGMPIKDVYSWTSMVSAYAKCGDLENA-------------------AKLFKEI 325
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM---PMKPNDAVLGSLLLGC 421
N+N + + CMV +S A + DEA + +M ++P DA L S+L C
Sbjct: 326 PNRN------VVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVEPIDATLVSVLSAC 375
>gi|242047142|ref|XP_002461317.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
gi|241924694|gb|EER97838.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
Length = 640
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 187/530 (35%), Positives = 287/530 (54%), Gaps = 29/530 (5%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEK 77
LT + +LL + + ++H+ + G Q + +L Y SG L A + +
Sbjct: 28 LTADRAAALLAGCASARRASELHAAAVRAGVDQDKAVDFRLQRAYAASGRLDLAVALLRR 87
Query: 78 TENPSTAIWNQMIRGHARSETPEKSVYLYKQMI-DKETEPDEYTYSFLLSVCARCGLFRE 136
T +P+ + I H+ ++ L +M+ P +T S L C G
Sbjct: 88 TPDPTAVFYTSAIHAHSSRGLHHAALALLSEMLLSHGLLPTAHTLSASLPAC---GGLAV 144
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDM-PARSVVSWNSLLK 195
G +HG + ++ T L+ +Y +G AR+LFD M P VVS ++L
Sbjct: 145 GRALHGYAVKLALSGEPYVATALLGMYARAGDAA---AARVLFDGMQPDPHVVSVTAMLT 201
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVA 255
Y K G +D A +FD +P ++++ W M+ G Q+G+ +AL LF M R+ V D+V+
Sbjct: 202 CYAKMGLLDDARSLFDGLPSKDLICWNAMMDGYTQHGRPSEALRLFRRMLRSGVEPDEVS 261
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
+V ALSA A++G + G+W+HS+V N S R + + ALI MY CG +E+A VF
Sbjct: 262 VVLALSAVAQLGTAESGRWLHSFVT-NSSSRRVRLNARVGTALIDMYYKCGSLEDAVAVF 320
Query: 316 RKMQ--RRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGF 358
+ R+ V+W +M+ G+A G+++EAL +TF+GVL+ACSH G
Sbjct: 321 GDLGAGDRDIVAWNAMVNGYAMHGHSREALAAFGQLRAQGLWPTDITFIGVLNACSHSGL 380
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL-GSL 417
VDEGR+ F M + +GI+P++EHYGCMVDL RAG ++EAF LVQ+M DAV+ SL
Sbjct: 381 VDEGRELFRSMAEEYGIEPKVEHYGCMVDLLGRAGRVEEAFELVQSMTRTKPDAVMWASL 440
Query: 418 LLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMG 477
L CR+H N EL ++A LVA + +G L++N+YAAA W++V VR M G
Sbjct: 441 LAACRLHKNMELGQRIADHLVA--NGLANSGTYVLLSNMYAAAGNWREVGRVRAMMRASG 498
Query: 478 VRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
++K PG S V++ + +FVAGD ++ +A+ IY L E+ A G+ P
Sbjct: 499 IQKEPGCSAVEVGRRVVEFVAGDRSHPRAAEIYAKLEEVNGMARARGHVP 548
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 187/565 (33%), Positives = 294/565 (52%), Gaps = 74/565 (13%)
Query: 3 VEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLF---QIHSQII--INGFSQKNYILAK 57
+ E IP P T A R +LL++ + +L Q+H++ + G + + +LAK
Sbjct: 1 MREAIPRAPCTHPAAAALRHCVALLRLHLASPSLATAKQLHARALRAAPGVTPSHPLLAK 60
Query: 58 LLAFYVTS------GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMID 111
L F++ + Y + + +P + N ++R A S P ++ L+++ +
Sbjct: 61 HLLFHLAALKAPPLRYAVAVLSGLLPSPDPFS--LNTVLRIFASSARPRVALALHRRHL- 117
Query: 112 KETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG 171
PD +TY LL CAR R GE +H +G S VF++ +L++LY G CG
Sbjct: 118 --APPDTHTYPPLLQACARLLALRYGEGLHAEACKNGLVSLVFVKNSLVHLY----GACG 171
Query: 172 VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP--HRNVVSWTTMISGCA 229
+ + A ++FDE+P RN+VSW ++++G A
Sbjct: 172 L------------------------------FESAHRVFDEIPPPERNLVSWNSVLNGFA 201
Query: 230 QNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREP 289
NG+ + L++F EM D +V+ L+ACAEIG L LG+ +H +V + VG
Sbjct: 202 ANGRPNEVLTVFREMLEVEFAPDGFTVVSVLTACAEIGVLALGRRVHVFVAKVGLVGN-- 259
Query: 290 VLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQGYAQEAL----- 343
NALI +YA CG +++A +F +M R VSWTS+I G A G+ +AL
Sbjct: 260 --AHAGNALIDLYAKCGGVDDARKMFGEMGVGRTVVSWTSLIVGLAVNGFGMDALQLFSM 317
Query: 344 ----------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAG 393
+T +GVL ACSH G VD+G ++F+ M +GI PRIEH GCMVDL RAG
Sbjct: 318 MEREKLMPTEITMVGVLYACSHCGLVDDGFRYFDQMKAEYGITPRIEHLGCMVDLLGRAG 377
Query: 394 LMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALV 453
++EA + + MP++PN V +LL C +H E+ +LV E+DP + Y+ L+
Sbjct: 378 RVEEAHNYITTMPLEPNAVVWRTLLGACAMHKKLEIGEAAWARLV-ELDPGHSGDYV-LL 435
Query: 454 ANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTL 513
+N+YA RW DV +R+ M+ GVRK PG S V++ +++FV GD ++ + IY+ L
Sbjct: 436 SNLYAGVGRWADVHVLRKTMVTHGVRKNPGHSLVELRNSVYEFVMGDRSHPETDQIYEML 495
Query: 514 GEITMQAMQEGYKPDISELFLGIEE 538
G+I + ++GY P S + IE+
Sbjct: 496 GDIAERLRRQGYIPHTSNVLADIED 520
>gi|222617355|gb|EEE53487.1| hypothetical protein OsJ_36641 [Oryza sativa Japonica Group]
Length = 921
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 178/512 (34%), Positives = 275/512 (53%), Gaps = 64/512 (12%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+HS ++ G + ++ L+ Y +G +A KVF++ WN + R
Sbjct: 457 VHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVR--- 513
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
E + +++ D+ E D +++ +L G + GE
Sbjct: 514 -EGELAGVRKLFDEMPEKDTVSWNTILD-----GYTKAGE-------------------- 547
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
V A LF MP R+VVSW++++ GY K+GD++ A IFD+MP +N+
Sbjct: 548 -------------VEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNL 594
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
V+WT M+S CAQ G +A LF +M+ A V LD A+V+ L+ACAE G L LGK IH Y
Sbjct: 595 VTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRY 654
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF-RKMQRRNTVSWTSMITGFAKQG 337
V + ++GR + NALI M+ CG + A VF + ++++VSW S+I GFA G
Sbjct: 655 VRKR-NLGRS---THVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHG 710
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+ +AL +T + VLSAC+H GFVDEGR+ F M +++GI P+IEHY
Sbjct: 711 HGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHY 770
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
GCM+DL R GL+ EA L+++MP +PN+ + GSLL CR+H N E A ++A ++++
Sbjct: 771 GCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYA-EIAVNELSKLQ 829
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P A Y A+++N+YA A +W D+A R +M G +K G SWV++N H+F GD
Sbjct: 830 PSNAGNY-AVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRK 888
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFL 534
++ + I + + ++ G P EL +
Sbjct: 889 HQDSDQISEMVDRLSSHVKHVGCVPAGHELLV 920
>gi|225423493|ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 536
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 172/515 (33%), Positives = 279/515 (54%), Gaps = 31/515 (6%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAF--YVTSGYLINAHKVFEKTENPSTAIWNQMIR 91
K L + H+Q++ G ++ L++LLAF + G L +A K+F++ ++P+ I N MI+
Sbjct: 19 KQLKEAHAQVLTCGLGTDSFALSRLLAFCSHPLHGSLPHAWKLFQQIQHPTICICNTMIK 78
Query: 92 GHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCS 151
++ +Y QM++ PD YT ++L CA GE HG+ + G+
Sbjct: 79 AFVLKGKLINTIQIYSQMLENGLYPDNYTLPYVLKACAGLQSCHLGESAHGQSVKLGFWF 138
Query: 152 NVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFD 211
++F+ L+ +Y G V AR +FD+MP + VSW ++ GY K GD++ A +FD
Sbjct: 139 DIFVGNTLIAMYSSFGN---VRAARCIFDEMPWHTAVSWTVMISGYAKVGDVETARMLFD 195
Query: 212 EMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKL 271
E P ++ W ++ISG QN ++ L +F M+ + D+ LV+ L ACA +G +++
Sbjct: 196 EAPMKDRGIWGSIISGYVQNNCFKEGLQMFRLMQSTGLEPDEAILVSILCACAHLGAMEI 255
Query: 272 GKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMIT 331
G W+H Y+++ +G P+ V L+ LI MYA CG ++ A +F M +R+T+ W +MI+
Sbjct: 256 GVWVHRYLDQ---LGH-PLSVRLSTGLIDMYAKCGSLDIAKKLFDGMSQRDTICWNAMIS 311
Query: 332 GFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIK 376
G A G AL +TF+ + +ACS+ G E + M + ++
Sbjct: 312 GMAMNGDGDNALRLFSEMEKAGVKPDDITFIAIFTACSYSGMAHEAIRLLNSMCTVYNME 371
Query: 377 PRIEHYGCMVDLFSRAGLMDEAFSLVQNMP--MKPNDAVLG--SLLLGCRIHNNAELASQ 432
P+ EHYGC+VDL RAGL+ EA L+ MP P + + +LL C H E+A
Sbjct: 372 PKSEHYGCIVDLLGRAGLLKEAKELILKMPNSSSPTEQAIAWRALLSACCSHGQTEVAED 431
Query: 433 VAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGV 492
AQ+L E +G L++N+YAAA + V +R+ M GV K PG S V+INGV
Sbjct: 432 AAQRL---FHLEHHSGAYVLLSNLYAAAGKQDHVRRIRKMMENRGVDKAPGCSSVKINGV 488
Query: 493 LHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
+H+F+AG+ T+ Q +++ L ++ Q G+ P
Sbjct: 489 VHEFIAGEETHLQMEEVHRVLEKMNKQMGYSGFNP 523
>gi|224141025|ref|XP_002323875.1| predicted protein [Populus trichocarpa]
gi|222866877|gb|EEF04008.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 169/434 (38%), Positives = 258/434 (59%), Gaps = 34/434 (7%)
Query: 31 NTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKTENPSTAIWNQ 88
N+ L QIH+ ++ G + ILAK+L F S G L A ++F++ +P+T +N
Sbjct: 6 NSMSRLKQIHAHSLLAGLHDHSIILAKMLRFAAVSPSGDLAYAQRLFDQLPHPNTFFYNT 65
Query: 89 MIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARC--------GLFREGEQV 140
+IRG+A+S P S++L QM +PDE+T++FL+ +R L E +++
Sbjct: 66 LIRGYAKSSIPSYSLHLVNQMRQNGVDPDEFTFNFLIKARSRVRVNINRNLPLVVECDEI 125
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKR 200
HG VL G+ S++F+R L++LY G A +FD+ VVSW+ L+ +V+
Sbjct: 126 HGAVLKLGFSSHLFVRNALIHLYAARGNPV---VAWRVFDETVGVDVVSWSGLVLAHVRA 182
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
G+++ A +FD+MP R+VVSWTTM+S +Q SR+AL L+ M V D+V LV+ +
Sbjct: 183 GELERARWVFDQMPERDVVSWTTMVSAYSQAKYSREALELYVTMLDKGVRPDEVTLVSVI 242
Query: 261 SACAEIGDLKLGKWIHSYVEEN-FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
SAC +GDL++G +HSY++EN F +VSL NALI MYA CG ++ A+ VF M
Sbjct: 243 SACTNLGDLQMGYSVHSYIDENGFR-----WMVSLCNALIDMYAKCGCMDRAWQVFNSMS 297
Query: 320 RRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQ 364
R++ V+W SMI+ A ++A +TFL VL+A +H G VDEG +
Sbjct: 298 RKSLVTWNSMISACANNRNPEDAFGLFSRMFNYGVAPDGVTFLAVLTAYAHVGLVDEGYR 357
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
FE M ++ GI+ RIEHYGC+V++ +AG ++EAF L+ +MP+ ND V G LL CR H
Sbjct: 358 LFESMQRDHGIEARIEHYGCVVNMLGQAGWLEEAFELITSMPLPSNDVVWGVLLAACRKH 417
Query: 425 NNAELASQVAQKLV 438
+ + +V +KL+
Sbjct: 418 GDVYMGERVVKKLL 431
>gi|145335149|ref|NP_172066.3| protein pigment defective 247 [Arabidopsis thaliana]
gi|75191933|sp|Q9MA50.1|PPR13_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05750, chloroplastic; AltName: Full=Protein PIGMENT
DEFECTIVE 247; Flags: Precursor
gi|6850304|gb|AAF29381.1|AC009999_1 Contains similarity to a hypothetical protein from Arabidopsis
thaliana gb|AC007109.6, and contains two DUF17 PF|01535
domains [Arabidopsis thaliana]
gi|62320576|dbj|BAD95203.1| hypothetical protein [Arabidopsis thaliana]
gi|332189766|gb|AEE27887.1| protein pigment defective 247 [Arabidopsis thaliana]
Length = 500
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 170/470 (36%), Positives = 272/470 (57%), Gaps = 34/470 (7%)
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
++ + +T W I R+ ++ + M EP+ T+ LLS CG F
Sbjct: 30 QSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLS---GCGDFTS 86
Query: 137 GEQVHGRVLASGYC------SNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSW 190
G + G +L C ++V + T ++ +Y G ARL+FD M ++ V+W
Sbjct: 87 GSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGR---FKKARLVFDYMEDKNSVTW 143
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG 250
N+++ GY++ G +D A K+FD+MP R+++SWT MI+G + G +AL F EM+ + V
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYV-EENFSVGREPVLVSLNNALIHMYASCGEIE 309
D VA++AAL+AC +G L G W+H YV ++F V ++N+LI +Y CG +E
Sbjct: 204 PDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNN-----VRVSNSLIDLYCRCGCVE 258
Query: 310 EAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALL---------------TFLGVLSACS 354
A VF M++R VSW S+I GFA G A E+L+ TF G L+ACS
Sbjct: 259 FARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACS 318
Query: 355 HGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL 414
H G V+EG ++F+ M ++ I PRIEHYGC+VDL+SRAG +++A LVQ+MPMKPN+ V+
Sbjct: 319 HVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVI 378
Query: 415 GSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMI 474
GSLL C H N + ++ K + +++ + + Y+ L +N+YAA +W+ + +R+KM
Sbjct: 379 GSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVIL-SNMYAADGKWEGASKMRRKMK 437
Query: 475 KMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEG 524
+G++K PG S ++I+ +H F+AGD+ + + + I + L I+ +G
Sbjct: 438 GLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQG 487
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 141/327 (43%), Gaps = 48/327 (14%)
Query: 41 SQIIINGFSQKNYIL-AKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
++++ + KN + ++ Y+ SG + NA K+F+K W MI G +
Sbjct: 128 ARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQ 187
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
E+++ +++M +PD L+ C G G VH VL+ + +NV + +L
Sbjct: 188 EEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSL 247
Query: 160 MNLYLMSGGECGVGC---ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
++LY C GC AR +F +M R+VVSWNS++ G+
Sbjct: 248 IDLY------CRCGCVEFARQVFYNMEKRTVVSWNSVIVGF------------------- 282
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
A NG + ++L F +M+ D V AL+AC+ +G ++ G
Sbjct: 283 ------------AANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYF 330
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAK 335
++ ++ + + L+ +Y+ G +E+A + + M + N V S++ +
Sbjct: 331 QIMKCDYRISPR---IEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSN 387
Query: 336 QG---YAQEALLTFLGVLSACSHGGFV 359
G E L+ L L+ SH +V
Sbjct: 388 HGNNIVLAERLMKHLTDLNVKSHSNYV 414
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H ++ F + L+ Y G + A +VF E + WN +I G A +
Sbjct: 228 VHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGN 287
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+S+ +++M +K +PD T++ L+ C+ GL EG
Sbjct: 288 AHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG 326
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 172/542 (31%), Positives = 285/542 (52%), Gaps = 57/542 (10%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
+L E+I A S ++T + + K +IH I+ +G + ++ + L+
Sbjct: 160 LLFSEMISA--GVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALID 217
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y + A K+F+++ N + +I G+ + ++ +++ +++++ P+ T
Sbjct: 218 IYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVT 277
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFD 180
+ +L CA G+++H +L G + + +M++Y
Sbjct: 278 LASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMY----------------- 320
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSL 240
K G +D A++IF MP ++ V W +I+ C+QNGK ++A+ L
Sbjct: 321 -----------------AKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDL 363
Query: 241 FNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIH 300
F +M R + D V++ AALSACA + L GK IHS++ + G V +ALI
Sbjct: 364 FRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIK----GAFDSEVFAESALID 419
Query: 301 MYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LT 345
MY CG + A VF M+ +N VSW S+I + G+ + +L +T
Sbjct: 420 MYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVT 479
Query: 346 FLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
FL +LSAC H G VD+G Q+F CM + +GI R+EHY C+VDLF RAG ++EAF ++NM
Sbjct: 480 FLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNM 539
Query: 406 PMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQD 465
P P+D V G+LL CR+H N ELA +VA + + ++DPE + Y+ L++NV+A A +W
Sbjct: 540 PFSPDDGVWGTLLGACRVHGNVELA-EVASRCLLDLDPENSGCYV-LLSNVHADAGQWGS 597
Query: 466 VAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGY 525
V +R M K GV+K PG SW+++N H FVA D ++ +++ IY L + ++ +EGY
Sbjct: 598 VRKIRSLMKKRGVQKVPGYSWIEVNKTTHMFVAADGSHPESAQIYSVLNNLLLELRKEGY 657
Query: 526 KP 527
P
Sbjct: 658 CP 659
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 105/452 (23%), Positives = 199/452 (44%), Gaps = 56/452 (12%)
Query: 10 NPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLI 69
N T ++T + S+ ++ Q+H +I GF + L+A Y G L
Sbjct: 66 NCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLS 125
Query: 70 NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
+A K+F + + WN MI G ++ +++ L+ +MI PD T++ L
Sbjct: 126 DALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVT 185
Query: 130 RCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVS 189
++G+++HG +L G +VF+++ L+++Y
Sbjct: 186 ESASLKQGKEIHGYILRHGIALDVFLKSALIDIYF------------------------- 220
Query: 190 WNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARV 249
K D+ A KIF + + ++V T +ISG NG + AL +F + ++
Sbjct: 221 ---------KCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKM 271
Query: 250 GLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIE 309
+ V L + L ACA + L LGK +H+ + ++ R V +A++ MYA CG ++
Sbjct: 272 SPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHV----GSAIMDMYAKCGRLD 327
Query: 310 EAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFL---------------GVLSACS 354
AY +FR+M ++ V W ++IT ++ G QEA+ F LSAC+
Sbjct: 328 LAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACA 387
Query: 355 HGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL 414
+ + G+ M + + ++D++ + G + A V +M + N+
Sbjct: 388 NLPALHHGKAIHSFMIKG-AFDSEVFAESALIDMYGKCGNLSVA-RCVFDMMREKNEVSW 445
Query: 415 GSLLLGCRIHNNAELASQVAQKLVAE-IDPEQ 445
S++ H + E++ + K++ + I P+
Sbjct: 446 NSIIAAYGSHGHLEVSLALFHKMLEDGIQPDH 477
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 182/382 (47%), Gaps = 56/382 (14%)
Query: 47 GFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLY 106
GF+ ++ + L+ Y +G + +A ++F+K N +WN M+ G + P +V ++
Sbjct: 2 GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61
Query: 107 KQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMS 166
+ M + +T+P+ T++ +LS+CA L G Q+HG V++ G+ + + L+ +Y
Sbjct: 62 EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121
Query: 167 GGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMIS 226
G + A LF+ MP +VV+WN ++ G+V+ G +D
Sbjct: 122 G---QLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMD---------------------- 156
Query: 227 GCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVG 286
+A LF+EM A V D + + L + E LK GK IH Y+ + +
Sbjct: 157 ---------EASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRH-GIA 206
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--- 343
+ V L +ALI +Y C ++ A +F++ + V T++I+G+ G +AL
Sbjct: 207 LD---VFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIF 263
Query: 344 ------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSR 391
+T VL AC+ ++ G++ + ++ G+ R ++D++++
Sbjct: 264 RWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKH-GLDERRHVGSAIMDMYAK 322
Query: 392 AGLMDEAFSLVQNMPMKPNDAV 413
G +D A+ + + MP K DAV
Sbjct: 323 CGRLDLAYQIFRRMPEK--DAV 342
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 176/513 (34%), Positives = 273/513 (53%), Gaps = 63/513 (12%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI--WNQMIRGHAR 95
+IHS + G ++ L++ + + G + A VF+ + WN MI G+ +
Sbjct: 148 EIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQ 207
Query: 96 SETPEKSVYLYKQMI-DKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVF 154
S E ++ ++ +++ D PDE T LSVC R GL G+++HG SG+ +VF
Sbjct: 208 SHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVF 267
Query: 155 IRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP 214
+ ++L+++Y K G I+ A K+FD +P
Sbjct: 268 VGSSLIDMY----------------------------------SKCGQIEDARKVFDRIP 293
Query: 215 HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKW 274
HRN V WT+MI+G AQ+ ++A+ LF EM+ D + LSAC G L G+W
Sbjct: 294 HRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRW 353
Query: 275 IHSYVEENFSVGREPVLVSLN--NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
IH Y E N + + LN NALI MY+ CG+I++A +F + + + SW+++I+G
Sbjct: 354 IHLYCERN------SIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISG 407
Query: 333 FAKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIK 376
A G + +AL +TFLGVL AC+HGGFVD+G +F M Q + +
Sbjct: 408 LAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLT 467
Query: 377 PRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQK 436
P IEHYGCMVDL RA L+ EA ++ +P++P+ + SLL CR H N ELA + A K
Sbjct: 468 PGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLLFACRNHGNIELA-EFAAK 526
Query: 437 LVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDF 496
+ E++P + G L++NVYA+A RW DV VR+ M ++K PG S+V+I+G++H+
Sbjct: 527 QIEELEPRR-CGARVLLSNVYASASRWGDVKRVRKDMATQRIKKQPGCSFVEIDGLVHEL 585
Query: 497 VAGDSTYKQASLIYKTLGEITMQAMQEGYKPDI 529
D ++ + IY+T+ I +G+ P I
Sbjct: 586 FVADRSHPEMGAIYETMISINKALQSKGFDPGI 618
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/446 (29%), Positives = 214/446 (47%), Gaps = 67/446 (15%)
Query: 24 FSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY-LINAHKVFEKTENPS 82
SLLQ + ++ QI S I +G + + +KLL + ++ + + +F + P+
Sbjct: 32 LSLLQNLSHPRSFNQILSHAIASGVFRDPVVSSKLLYYSLSHDHDFAFSRTLFFQIHKPN 91
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHG 142
WN M R ++RS P +++ LY M+ T PD Y++ F+L CAR L +G ++H
Sbjct: 92 VFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGREIHS 151
Query: 143 RVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPA--RSVVSWNSLLKGYVK 199
L G +VF++ L++ + CG V AR +FD +PA R VVSWNS++ GY++
Sbjct: 152 STLKLGVHLDVFVQNALISAF----SSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQ 207
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
+ A K+F W + G + D+V LV+A
Sbjct: 208 SHRYELALKVF----------WELLGDG--------------------SLSPDEVTLVSA 237
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVL-VSLNNALIHMYASCGEIEEAYGVFRKM 318
LS C +G L LGK IH G VL V + ++LI MY+ CG+IE+A VF ++
Sbjct: 238 LSVCGRLGLLDLGKKIHGLF-----TGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRI 292
Query: 319 QRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGR 363
RNTV WTSMI G+A+ +EA+ T VLSAC H G + +GR
Sbjct: 293 PHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGR 352
Query: 364 QFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPN----DAVLGSLLL 419
+N I+ + ++ ++S+ G + +A + + +P+ AV+ L +
Sbjct: 353 WIHLYCERN-SIEMDLNARNALIGMYSKCGDIQKALEIFHGL-TQPDIFSWSAVISGLAM 410
Query: 420 GCRIHNNAELASQVAQKLVAEIDPEQ 445
L SQ+ +++++I P +
Sbjct: 411 NGESDKALHLFSQM--EMISDIRPNE 434
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 125/280 (44%), Gaps = 28/280 (10%)
Query: 209 IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGD 268
+F ++ NV SW M +++ + ++L+N M R D + L ACA +
Sbjct: 83 LFFQIHKPNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSL 142
Query: 269 LKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR--RNTVSW 326
L G+ IHS +G + V + NALI ++SCG +E A VF + R+ VSW
Sbjct: 143 LHKGREIHS---STLKLGVH-LDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSW 198
Query: 327 TSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFECMN 370
SMI+G+ + + AL +T + LS C G +D G++
Sbjct: 199 NSMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFT 258
Query: 371 QNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELA 430
+ G + ++D++S+ G +++A + +P + N S++ G + ++L
Sbjct: 259 GS-GFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHR-NTVCWTSMIAG---YAQSDLF 313
Query: 431 SQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVR 470
+ A +L E+ A A +A V +A W +A R
Sbjct: 314 KE-AIELFREMQIGGFAADAATIACVLSACGHWGALAQGR 352
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 182/515 (35%), Positives = 282/515 (54%), Gaps = 30/515 (5%)
Query: 44 IINGFSQKNYILAK-LLAFYVTSGYLINAHKVFE--KTENPSTAIWNQMIRGHARSETPE 100
+ G ++N I + ++A + G + A ++F + W+ M+ + ++E E
Sbjct: 193 VFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGE 252
Query: 101 KSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLM 160
+++ L+ +M DE LS C+R G VHG + G V ++ L+
Sbjct: 253 EALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALI 312
Query: 161 NLYLMSGGECG-VGCARLLFDDM-PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
+LY CG + AR +FDD ++SWNS++ GY++ G I A +F MP ++V
Sbjct: 313 HLY----SSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDV 368
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
VSW+ MISG AQ+ +AL+LF EM+ V D+ ALV+A+SAC + L LGKWIH+Y
Sbjct: 369 VSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAY 428
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ N + V V L+ LI MY CG +E A VF M+ + +W ++I G A G
Sbjct: 429 ISRN----KLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGS 484
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
+++L +TF+GVL AC H G V++GR +F M I+ I+HYG
Sbjct: 485 VEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYG 544
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
CMVDL RAGL+ EA L+ +MPM P+ A G+LL CR H + E+ ++ +KL+ ++ P
Sbjct: 545 CMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLI-QLQP 603
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
+ G+ L++N+YA+ W +V +R M + GV K PG S ++ NG +H+F+AGD T+
Sbjct: 604 DH-DGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDKTH 662
Query: 504 KQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
Q + I L + + EGY P SE+ L I+E
Sbjct: 663 PQINDIEHMLDVVAAKLKIEGYVPTTSEVSLDIDE 697
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 141/469 (30%), Positives = 228/469 (48%), Gaps = 94/469 (20%)
Query: 25 SLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAH---KVFEKTENP 81
SLLQ + Q+ SQ I+ G Y ++L+ F S L+ H ++F NP
Sbjct: 8 SLLQSCKCPRHFKQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIFNHLRNP 67
Query: 82 STAIWNQMIRGHAR-SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA-RCGLFREGEQ 139
+T WN ++R H +P +++ YK + +PD YTY LL CA R F EG Q
Sbjct: 68 NTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARVSEF-EGRQ 126
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVK 199
+H ++SG+ +V++R LMNLY + G VG AR +F++ P +VSWN+LL GYV+
Sbjct: 127 LHAHAVSSGFDGDVYVRNTLMNLYAVCGS---VGSARRVFEESPVLDLVSWNTLLAGYVQ 183
Query: 200 RGDIDGAWKIFDEMPHRN---------------------------------VVSWTTMIS 226
G+++ A ++F+ MP RN +VSW+ M+S
Sbjct: 184 AGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVS 243
Query: 227 GCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVG 286
QN +AL LF EM+ + V +D+V +V+ALSAC+ + ++++G+W+H VG
Sbjct: 244 CYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLA---VKVG 300
Query: 287 REPVLVSLNNALIHMYASCGE--------------------------------IEEAYGV 314
E VSL NALIH+Y+SCGE I++A +
Sbjct: 301 VED-YVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEML 359
Query: 315 FRKMQRRNTVSWTSMITGFAKQGYAQEALLTF---------------LGVLSACSHGGFV 359
F M ++ VSW++MI+G+A+ EAL F + +SAC+H +
Sbjct: 360 FYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATL 419
Query: 360 DEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
D G+ +++N ++ + ++D++ + G ++ A + M K
Sbjct: 420 DLGKWIHAYISRN-KLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEK 467
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 39 IHSQIIINGFSQKNYILAK-LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
IH+ I N Q N IL+ L+ Y+ G + NA +VF E + WN +I G A +
Sbjct: 425 IHAYISRNKL-QVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNG 483
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+ E+S+ ++ M T P+E T+ +L C GL +G ++ I
Sbjct: 484 SVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHK-----IEA 538
Query: 158 NLMNLYLMSG--GECG-VGCARLLFDDMP-ARSVVSWNSLLKGYVKRGD 202
N+ + M G G + A L D MP A V +W +LL K D
Sbjct: 539 NIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRD 587
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 169/518 (32%), Positives = 278/518 (53%), Gaps = 57/518 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+ H +++ NGF +++ L+ FY G A VF+++ WN MI H
Sbjct: 132 RFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKG 191
Query: 98 TPEKSVYLYKQMIDKET-EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
EK+ L +M + PDE T L+ CA+ G G+ +H G N +R
Sbjct: 192 LSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDEN--LR 249
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
N N++L Y K DI+ A ++F+ + +
Sbjct: 250 VN--------------------------------NAILDMYCKCDDIESAQEVFNRIREK 277
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
+V+SWT+M+SG A++G ++AL+LF +M+ ++ LD++ LV LSACA+ G L GK+IH
Sbjct: 278 DVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIH 337
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+++ F + + VL AL+ MYA CG I+ A VFR+M+ RN +W ++I G A
Sbjct: 338 LLIDK-FEINCDLVL---ETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMH 393
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G+ ++A+ +TF+ +L ACSH G VDEG F+ M + I+PR+EH
Sbjct: 394 GHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEH 453
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YGC+VDL RA +D+A + ++NMP+K N + +LL CR + +LA ++ ++++ E+
Sbjct: 454 YGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVI-EL 512
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+P+ Y+ L +N+YA +W +R++M G+ K PG SW+++NG++H FVAGD
Sbjct: 513 EPDSCGRYVML-SNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDR 571
Query: 502 TYKQASLIYKTLGEITMQA-MQEGYKPDISELFLGIEE 538
++ Q IY + E+T + + G+ P + + IEE
Sbjct: 572 SHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEE 609
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/411 (31%), Positives = 217/411 (52%), Gaps = 58/411 (14%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKTENPSTAIWNQMIRGHAR 95
Q H+ ++ +KL++F S G L A K+F + +NP I N MIRG+AR
Sbjct: 29 QAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYAR 88
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
S+ P ++V LY M+++ D YTY F+L+ CAR G + G + H VL +G+ S++F+
Sbjct: 89 SQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFV 148
Query: 156 RTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP 214
L+ Y CG GCA +FD+ R VV+WN ++ ++ +G + A+ + DEM
Sbjct: 149 INALIQFY----HNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEM- 203
Query: 215 HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKW 274
+ + +R D+V +V+ + ACA++G+L+ GK+
Sbjct: 204 ------------------------TKLDNLRP-----DEVTMVSLVPACAQLGNLERGKF 234
Query: 275 IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
+HSY +E +G + L +NNA++ MY C +IE A VF +++ ++ +SWTSM++G A
Sbjct: 235 LHSYSKE---LGLDENL-RVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLA 290
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
K GY QEAL +T +GVLSAC+ G +D+G+ + + + I +
Sbjct: 291 KSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGK-YIHLLIDKFEINCDL 349
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELA 430
+VD++++ G +D A + + M ++ N +L+ G +H + E A
Sbjct: 350 VLETALVDMYAKCGSIDLALQVFRRMRVR-NVFTWNALIGGLAMHGHGEDA 399
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 116/249 (46%), Gaps = 10/249 (4%)
Query: 2 LVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAF 61
L++E+ + + + + Q+ N + F +HS G + + +L
Sbjct: 199 LLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKF-LHSYSKELGLDENLRVNNAILDM 257
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
Y + +A +VF + W M+ G A+S ++++ L+++M + E DE T
Sbjct: 258 YCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITL 317
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFD 180
+LS CA+ G +G+ +H + ++ + T L+++Y +CG + A +F
Sbjct: 318 VGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMY----AKCGSIDLALQVFR 373
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV----VSWTTMISGCAQNGKSRQ 236
M R+V +WN+L+ G G + A +FD+M H + V++ ++ C+ G +
Sbjct: 374 RMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDE 433
Query: 237 ALSLFNEMR 245
L++F M+
Sbjct: 434 GLAMFQAMK 442
>gi|347954508|gb|AEP33754.1| chloroplast biogenesis 19, partial [Nasturtium officinale]
Length = 447
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 167/433 (38%), Positives = 264/433 (60%), Gaps = 34/433 (7%)
Query: 114 TEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYC------SNVFIRTNLMNLYLMSG 167
EP+ T+ LLS CG F G + G +L C ++V + T ++ +Y G
Sbjct: 14 VEPNHITFIALLS---GCGDFPSGSEALGDLLHGYACKLGLDRTHVMVGTAILGMYSKRG 70
Query: 168 GECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISG 227
ARL+FD M ++ V+WN+++ GY++ G ++ A K+FDEM +R+++SWT M++G
Sbjct: 71 R---FRKARLIFDYMEDKNSVTWNTMIDGYMRSGQVNTAVKLFDEMLNRDLISWTAMVNG 127
Query: 228 CAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV-EENFSVG 286
+ G +ALS F EM+ + V D VA++AAL+AC +G L G WIH YV ++F
Sbjct: 128 FVKKGFHEEALSWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVMSQDFKNN 187
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--- 343
V ++N+LI +Y CG +E A VF KM++R VSW S+I GFA G A E+L
Sbjct: 188 -----VRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNAHESLFYF 242
Query: 344 ------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSR 391
+TF G L+ACSH G V+EG ++F+ M +++ I PRIEHYGC+VDL+SR
Sbjct: 243 RKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDYRISPRIEHYGCIVDLYSR 302
Query: 392 AGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLA 451
AG +++A +VQ+MPMKPN+ V+GSLL C+ H N L ++ K +++++ + + Y+
Sbjct: 303 AGRLEDALKVVQSMPMKPNEVVIGSLLAACKNHGNNTLLAERLMKHLSDLNVKSHSNYVI 362
Query: 452 LVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYK 511
L +N+YAA +W+ + +R+KM +G++K PG S ++I+ H F+AGDS + + + I +
Sbjct: 363 L-SNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDECTHVFMAGDSAHVETANIRE 421
Query: 512 TLGEITMQAMQEG 524
LG ++ +G
Sbjct: 422 ILGLMSSDLRLQG 434
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 140/327 (42%), Gaps = 48/327 (14%)
Query: 41 SQIIINGFSQKNYIL-AKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
+++I + KN + ++ Y+ SG + A K+F++ N W M+ G +
Sbjct: 75 ARLIFDYMEDKNSVTWNTMIDGYMRSGQVNTAVKLFDEMLNRDLISWTAMVNGFVKKGFH 134
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
E+++ +++M +PD L+ C G G +H V++ + +NV + +L
Sbjct: 135 EEALSWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVMSQDFKNNVRVSNSL 194
Query: 160 MNLYLMSGGECGVGC---ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
++LY C GC AR +FD M R+VVSWNS++ G+
Sbjct: 195 IDLY------CRCGCVEFARQVFDKMEKRTVVSWNSVIVGF------------------- 229
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
A NG + ++L F +M+ D V AL+AC+ +G ++ G
Sbjct: 230 ------------AANGNAHESLFYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYF 277
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAK 335
++ ++ + + ++ +Y+ G +E+A V + M + N V S++
Sbjct: 278 QTMKRDYRISPR---IEHYGCIVDLYSRAGRLEDALKVVQSMPMKPNEVVIGSLLAACKN 334
Query: 336 QG---YAQEALLTFLGVLSACSHGGFV 359
G E L+ L L+ SH +V
Sbjct: 335 HGNNTLLAERLMKHLSDLNVKSHSNYV 361
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 241 FNEMRRARVGLDQVALVAALSACAEI--GDLKLGKWIHSYVEENFSVGREPVLVSLNNAL 298
F++MR A V + + +A LS C + G LG +H Y +G + V + A+
Sbjct: 6 FSDMRFAGVEPNHITFIALLSGCGDFPSGSEALGDLLHGYA---CKLGLDRTHVMVGTAI 62
Query: 299 IHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEA-----------LLTFL 347
+ MY+ G +A +F M+ +N+V+W +MI G+ + G A L+++
Sbjct: 63 LGMYSKRGRFRKARLIFDYMEDKNSVTWNTMIDGYMRSGQVNTAVKLFDEMLNRDLISWT 122
Query: 348 GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL-----V 402
+++ GF +E +F M Q G+KP ++ + L + L +F L V
Sbjct: 123 AMVNGFVKKGFHEEALSWFREM-QISGVKP--DYVAIIAALAACTNLGALSFGLWIHRYV 179
Query: 403 QNMPMKPNDAVLGSLL-LGCRIHNNAELASQVAQKL 437
+ K N V SL+ L CR E A QV K+
Sbjct: 180 MSQDFKNNVRVSNSLIDLYCRC-GCVEFARQVFDKM 214
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
IH ++ F + L+ Y G + A +VF+K E + WN +I G A +
Sbjct: 175 IHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGN 234
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+S++ +++M ++ +PD T++ L+ C+ GL EG
Sbjct: 235 AHESLFYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEG 273
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 174/506 (34%), Positives = 279/506 (55%), Gaps = 25/506 (4%)
Query: 33 TKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRG 92
++T Q+H + + + +I + L+ Y +A +VF+ + WN +I
Sbjct: 167 SRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNVVSWNSLITC 226
Query: 93 HARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSN 152
+ ++ +++ L+ +M+ PDE T S ++S CA REG QVH ++ +
Sbjct: 227 YEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRD 286
Query: 153 VFIRTN-LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIF 210
+ N L+++Y +CG AR +FD MP+RS+VS S+L GY K +++ A +F
Sbjct: 287 DMVLNNALVDMY----AKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVF 342
Query: 211 DEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLK 270
+M +NV++W +I+ AQNG+ +A+ LF +++R + L+AC I DL+
Sbjct: 343 SQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQ 402
Query: 271 LGKWIHSYV-EENFSVGREP-VLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTS 328
LG+ H +V +E F P V + N+L+ MY G I++ VF +M R+ VSW +
Sbjct: 403 LGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNA 462
Query: 329 MITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNW 373
MI G+A+ G A++AL +T +GVLSAC H G VDEGR++F M ++
Sbjct: 463 MIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFHSMTEDH 522
Query: 374 GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQV 433
GI P +HY CMVDL RAG + EA L+ +MPM+P+ + SLL CR+H N EL
Sbjct: 523 GITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLLGACRLHKNVELGEWT 582
Query: 434 AQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVL 493
A +L E+DP+ + Y+ L++N+YA +W +V VR+ M GV K PG SW++I +
Sbjct: 583 AGRLF-ELDPQNSGPYV-LLSNMYAEMGKWAEVFRVRRSMKDRGVSKQPGCSWIEIGRKM 640
Query: 494 HDFVAGDSTYKQASLIYKTLGEITMQ 519
+ F+A D + + I+ TL I M+
Sbjct: 641 NVFLARDKRHPCRNEIHNTLRIIQME 666
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 161/345 (46%), Gaps = 80/345 (23%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
H++I+ + + + ++L L++ Y G L +A +VF++ +T +N ++ +AR P
Sbjct: 40 HARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGRP 99
Query: 100 EKSVYLYKQMIDKETEPDE-------------------------------------YTYS 122
+++ L++ + D PD+ Y+++
Sbjct: 100 DEARALFEAIPD----PDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFA 155
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDD 181
LS CA R GEQVHG V S + +V IR+ L+++Y +C AR +FD
Sbjct: 156 SALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMY----AKCERPEDARRVFDA 211
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
MP R+VVSWNSL+ Y QNG +AL LF
Sbjct: 212 MPERNVVSWNSLITCY-------------------------------EQNGPVGEALMLF 240
Query: 242 NEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHM 301
EM A D+V L + +SACA + + G+ +H+++ + + + V LNNAL+ M
Sbjct: 241 VEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMV---LNNALVDM 297
Query: 302 YASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
YA CG EA +F M R+ VS TS++TG+AK ++A + F
Sbjct: 298 YAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVF 342
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 136/287 (47%), Gaps = 28/287 (9%)
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKR 200
H R+L S F+ L++ Y G + AR +FD++P R+ S+N+LL Y +
Sbjct: 40 HARILKSPVAGETFLLNTLVSTYARLGR---LRDARRVFDEIPLRNTFSYNALLSAYARL 96
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR--QALSLFNEMRRARVGLDQVALVA 258
G D A +F+ +P + S+ +++ A++G+ AL M L+ + +
Sbjct: 97 GRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFAS 156
Query: 259 ALSACAEIGDLKLGKWIHSYVEENFSVGREPVL--VSLNNALIHMYASCGEIEEAYGVFR 316
ALSACA D + G+ +H V R P V + +AL+ MYA C E+A VF
Sbjct: 157 ALSACAAEKDSRTGEQVHGL------VARSPHADDVHIRSALVDMYAKCERPEDARRVFD 210
Query: 317 KMQRRNTVSWTSMITGFAKQGYAQEALLTFL---------------GVLSACSHGGFVDE 361
M RN VSW S+IT + + G EAL+ F+ V+SAC+ E
Sbjct: 211 AMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADRE 270
Query: 362 GRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
GRQ M + ++ + +VD++++ G EA + +MP +
Sbjct: 271 GRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSR 317
>gi|15228653|ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29230
gi|9293916|dbj|BAB01819.1| unnamed protein product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 179/589 (30%), Positives = 305/589 (51%), Gaps = 90/589 (15%)
Query: 11 PATSSKALTTRQIF-----SLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS 65
P + +++R+IF L + N + + Q+H+QII + +I KL++
Sbjct: 6 PVRAPSWVSSRRIFEERLQDLPKCANLNQ-VKQLHAQIIRRNLHEDLHIAPKLISALSLC 64
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
A +VF + + P+ + N +IR HA++ P ++ +++ +M D +TY FLL
Sbjct: 65 RQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLL 124
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYL--------------------- 164
C+ + +H + G S++++ L++ Y
Sbjct: 125 KACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERD 184
Query: 165 ------MSGGECGVG---CARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
M GG G AR LFD+MP R ++SWN++L GY + ++ A+++F++MP
Sbjct: 185 TVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPE 244
Query: 216 RNVVSWTTM---------------------------------ISGCAQNGKSRQALSLFN 242
RN VSW+TM I+G A+ G ++A L +
Sbjct: 245 RNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVD 304
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMY 302
+M + + D A+++ L+AC E G L LG IHS ++ + ++G ++ NAL+ MY
Sbjct: 305 QMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRS-NLGSNAYVL---NALLDMY 360
Query: 303 ASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFL 347
A CG +++A+ VF + +++ VSW +M+ G G+ +EA+ +TF+
Sbjct: 361 AKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFI 420
Query: 348 GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM 407
VL +C+H G +DEG +F M + + + P++EHYGC+VDL R G + EA +VQ MPM
Sbjct: 421 AVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPM 480
Query: 408 KPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVA 467
+PN + G+LL CR+HN ++A +V LV ++DP Y +L++N+YAAA+ W+ VA
Sbjct: 481 EPNVVIWGALLGACRMHNEVDIAKEVLDNLV-KLDPCDPGNY-SLLSNIYAAAEDWEGVA 538
Query: 468 AVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEI 516
+R KM MGV KP G S V++ +H+F D ++ ++ IY+ LG +
Sbjct: 539 DIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 170/505 (33%), Positives = 284/505 (56%), Gaps = 28/505 (5%)
Query: 38 QIHSQIIINGFSQKN-YILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
++ ++ + + S +N Y +L+ Y G + A K+F+K WN M+ HA+
Sbjct: 111 EVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQC 170
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
++++ Y + + + ++++ +L+VC + QVHG++L +G+ SNV +
Sbjct: 171 GYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLS 230
Query: 157 TNLMNLYLMSGGECGV-GCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
+++++ Y+ +CG+ G AR LFD+M AR V++W +++ GY K GD+ A ++F EMP
Sbjct: 231 SSVLDAYV----KCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPE 286
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
+N VSWT +ISG A+NG +AL LF +M V DQ + L ACA I LK GK I
Sbjct: 287 KNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQI 346
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFA 334
H+Y+ + +P + + +ALI MY+ CG + VF M + + V W ++I+ A
Sbjct: 347 HAYL---LRINFQPNTIVV-SALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALA 402
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
+ G +EA+ +TF+ +L+ACSH G V +G FFE M+ ++GI P
Sbjct: 403 QHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQ 462
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
EHY C++DL RAG +E ++ MP KP+D V +LL CRIH + EL + A++L+
Sbjct: 463 EHYACLIDLLGRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCRIHGHIELGRKAAERLI- 521
Query: 440 EIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG 499
E++P+ + Y+ L++++YA RW+ V VRQ M + V+K SW++I +H F
Sbjct: 522 ELEPQSSTAYV-LLSSIYAVLGRWESVQKVRQLMNERQVKKERAISWLEIENKVHSFSVS 580
Query: 500 DSTYKQASLIYKTLGEITMQAMQEG 524
DS++ IY L ++ Q ++
Sbjct: 581 DSSHPLKEQIYSVLEQLAGQMEEDA 605
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 133/295 (45%), Gaps = 39/295 (13%)
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK 273
P R ++ C +N K +A+S + R + LD L + L CA+ L+ GK
Sbjct: 21 PRRRPCLVEAIVKLCKKN-KLNEAVSSLENLARRGLRLDSRTLASLLQHCADSRALREGK 79
Query: 274 WIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF 333
+H +++ G + L+N LI+MYA CG+ EA VF KM RN SW +M++G+
Sbjct: 80 RVHLHLK---LTGLKRPGTFLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGY 136
Query: 334 AKQGYAQEA-----------LLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
AK G + A ++++ ++ A + G+ DE +F+ Q
Sbjct: 137 AKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQ----------L 186
Query: 383 GCMVDLFSRAGLMDEAFSLVQ-NMPMKPNDAVLGSLLLGCRIHNNAELASQV-------A 434
G + FS AG++ L + + + + +L + L + +++ L + V A
Sbjct: 187 GIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDA 246
Query: 435 QKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQI 489
+KL E+ + +V+ YA +W D+ + + ++M + P SW +
Sbjct: 247 RKLFDEMSARDVLAWTTMVSG-YA---KWGDMKSANELFVEMPEKNPV--SWTAL 295
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 70/258 (27%)
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYC-SNVFIRTNLMNLYLMSGGECGVGCA 175
D T + LL CA REG++VH + +G F+ +L+N+Y +CG
Sbjct: 58 DSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMY----AKCG---- 109
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
++ AR K+FD+M RN+ SW M+SG A+ G +
Sbjct: 110 ----KEVEAR----------------------KVFDKMSARNLYSWNNMLSGYAKLGMIK 143
Query: 236 QALSLFNEM-------------------------------RRARVGLDQVALVAALSACA 264
A LF++M R+ + + + L+ C
Sbjct: 144 PARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCV 203
Query: 265 EIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTV 324
++ ++ L + +H + V V L+++++ Y CG + +A +F +M R+ +
Sbjct: 204 KLKEVGLTRQVHGQI----LVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVL 259
Query: 325 SWTSMITGFAKQGYAQEA 342
+WT+M++G+AK G + A
Sbjct: 260 AWTTMVSGYAKWGDMKSA 277
>gi|7671499|emb|CAB89340.1| putative protein [Arabidopsis thaliana]
Length = 514
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 175/496 (35%), Positives = 270/496 (54%), Gaps = 57/496 (11%)
Query: 43 IIINGFSQKNYILAKLL--AFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPE 100
+++NG ++ +L+ A G L AHK+F++ P +I N ++RG A+S PE
Sbjct: 1 MVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPE 60
Query: 101 KSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLM 160
K+V LY +M + PD YT++F+L C++ G HG+V+ G+ N +++ L+
Sbjct: 61 KTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALI 120
Query: 161 NLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVV 219
+ CG +G A LFDD V+W+S+ GY KRG ID A ++FDEMP+++ V
Sbjct: 121 LFH----ANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQV 176
Query: 220 SWTTMISGCAQN-------------------------------GKSRQALSLFNEMRRAR 248
+W MI+GC + G ++AL +F EMR A
Sbjct: 177 AWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAG 236
Query: 249 VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREP-VLVSLNNALIHMYASCGE 307
D V +++ LSACA +GDL+ GK +H Y+ E SV V + NALI MYA CG
Sbjct: 237 EHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGS 296
Query: 308 IEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSA 352
I+ A VFR ++ R+ +W ++I G A +A+ ++ +TF+GV+ A
Sbjct: 297 IDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILA 355
Query: 353 CSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDA 412
CSH G VDEGR++F M + I+P I+HYGCMVD+ RAG ++EAF V++M ++PN
Sbjct: 356 CSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAI 415
Query: 413 VLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQK 472
V +LL C+I+ N EL +KL++ E +G L++N+YA+ +W V VR+
Sbjct: 416 VWRTLLGACKIYGNVELGKYANEKLLSMRKDE--SGDYVLLSNIYASTGQWDGVQKVRKM 473
Query: 473 MIKMGVRKPPGQSWVQ 488
V+KP G S ++
Sbjct: 474 FDDTRVKKPTGVSLIE 489
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 157/353 (44%), Gaps = 50/353 (14%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
F H +++ +GF Y+ L+ F+ G L A ++F+ + W+ M G+A+
Sbjct: 98 FAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKR 157
Query: 97 ETPEKSVYLYKQM---------------------------IDKETEPDEYTYSFLLSVCA 129
++++ L+ +M D+ TE D T++ ++S
Sbjct: 158 GKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYV 217
Query: 130 RCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGG-ECGVGCARLLFDDMPARSVV 188
CG +E + + +G +V +L++ + G E G RL + SV
Sbjct: 218 NCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETG---KRLHIYILETASVS 274
Query: 189 S--------WNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSL 240
S WN+L+ Y K G ID A ++F + R++ +W T+I G A + + ++ +
Sbjct: 275 SSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEM 333
Query: 241 FNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIH 300
F EM+R +V ++V + + AC+ G + G+ S + + +++ EP + ++
Sbjct: 334 FEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNI--EPN-IKHYGCMVD 390
Query: 301 MYASCGEIEEAYGVFRKMQ-RRNTVSWTSM-----ITGFAKQG-YAQEALLTF 346
M G++EEA+ M+ N + W ++ I G + G YA E LL+
Sbjct: 391 MLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSM 443
>gi|255572939|ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533210|gb|EEF34966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 621
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 179/545 (32%), Positives = 288/545 (52%), Gaps = 60/545 (11%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
IH ++ GF ++ +L+ Y G + +A +F++ S WN M+ +A +
Sbjct: 64 IHGHVLEMGFQSHLHVGNELIGMYAKLGRMRDARHLFDRMSVRSYISWNTMVSAYAFNYD 123
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE-----------GEQVHGRVLAS 147
++ ++++M + EP+ T++ L+S AR G E G +V G LA
Sbjct: 124 CNGALEIFQRMESEGMEPNLVTWTSLISSYARSGWHEEAMELFGLMRMKGVEVSGEALAV 183
Query: 148 --GYCSNV--FIRTNLMNLYLMSGG-----------------ECGVGCARLLFDDMPARS 186
C+++ F+R +++ Y + GG V A LF +M +S
Sbjct: 184 VISICADLGAFVRAKIIHEYAVKGGFEEYSFVKSALICVYGKHGDVNGAWNLFLEMKNKS 243
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHR--------NVVSWTTMISGCAQNGKSRQAL 238
+ SWN+L+ + + G D A +IF ++ NVVSW+ +I G A G+ ++AL
Sbjct: 244 LASWNALITSHAEAGLCDEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFASKGREKEAL 303
Query: 239 SLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNAL 298
LF M+ A++ + V + LS CAE+ L LG+ IH +V V + + N L
Sbjct: 304 ELFRRMQHAKILANAVTISTVLSLCAELAALHLGREIHGHVVRAVMVNN----ILVGNGL 359
Query: 299 IHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------------- 343
++MYA CG ++E + +F K +R++ +SW SMITG+ G AL
Sbjct: 360 VNMYAKCGCLKEGHMIFEKTERKDLISWNSMITGYGMHGLGMNALETFDQMIKLGFKPDG 419
Query: 344 LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQ 403
+TF+ VLS+CSH G V EGR+ F+ M + + I+P++EHY CMVDL RAGL+ EA +V+
Sbjct: 420 VTFVAVLSSCSHSGLVHEGRRLFDQMLKKYRIEPQMEHYACMVDLLGRAGLLREASEIVK 479
Query: 404 NMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRW 463
NMP+ PN V G+LL CR+HNN E+A + A L + + G L++N+YAA+ RW
Sbjct: 480 NMPVAPNACVWGALLNSCRMHNNTEIAEETASHLF-NLSHRETTGTYMLLSNIYAASGRW 538
Query: 464 QDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQE 523
+D A VR G++K PGQSW+++ ++ F AG++ + I++ L E+T Q +E
Sbjct: 539 EDSARVRTSAKTKGLKKNPGQSWIKVEKNVYTFSAGNNMQRGFEQIFEILEELTFQMERE 598
Query: 524 GYKPD 528
G D
Sbjct: 599 GTVHD 603
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 161/336 (47%), Gaps = 44/336 (13%)
Query: 107 KQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMS 166
++M T D +T+ ++ CA G F G+ +HG VL G+ S++ + L+ +Y
Sbjct: 31 RRMRKIGTLGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKL 90
Query: 167 GGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR----NVVSWT 222
G + AR LFD M RS +SWN+++ Y D +GA +IF M N+V+WT
Sbjct: 91 G---RMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWT 147
Query: 223 TMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVE-- 280
++IS A++G +A+ LF MR V + AL +S CA++G K IH Y
Sbjct: 148 SLISSYARSGWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKG 207
Query: 281 --ENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
E +S + +ALI +Y G++ A+ +F +M+ ++ SW ++IT A+ G
Sbjct: 208 GFEEYSF--------VKSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGL 259
Query: 339 AQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEA 398
EAL F S G +C ++P + + ++D F+ G EA
Sbjct: 260 CDEALEIF----SQLERSG---------DCPR----LRPNVVSWSAIIDGFASKGREKEA 302
Query: 399 FSL---VQNMPMKPNDAVLGSLLLGCRIHNNAELAS 431
L +Q+ + N + ++L C AELA+
Sbjct: 303 LELFRRMQHAKILANAVTISTVLSLC-----AELAA 333
>gi|147771783|emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 161/482 (33%), Positives = 280/482 (58%), Gaps = 26/482 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H+ ++ GF+ ++ LL FYV G + +VF++ P +W +IR +
Sbjct: 112 EVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVT 171
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
PEK++ L++ M + PD S ++S C G + +H + SG + F+ +
Sbjct: 172 FPEKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSS 231
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L++ Y GECG + A F + P +++V WN+++ V+ +++ ++F MP R
Sbjct: 232 TLISTY----GECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDR 287
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
+VVSW +MI G A+ G+ ++AL+ F+EM + V + + L++ LSACA G L G WIH
Sbjct: 288 DVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIH 347
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+YV++N + R+ SL+++LI MY+ CG+I++A +F + RR+ +WTS++ G A
Sbjct: 348 AYVDKN-DMNRDG---SLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMH 403
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G ++AL +T +GVLSAC+H G +D+G +F+ M + +G+ P++EH
Sbjct: 404 GRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEH 463
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YG MVDL R G + EA+ L+ MPM+ N+ + G+ L CR+HNN EL A++L+ +
Sbjct: 464 YGXMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLG-L 522
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
P + L +N+YA +W +R+++ K G++K PG S +++NG +H F+ GD+
Sbjct: 523 XPRDPWARVML-SNMYAEEAKWDRSMGLRKEIKKKGLKKSPGCSSIEVNGSVHGFLVGDN 581
Query: 502 TY 503
++
Sbjct: 582 SH 583
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 182/441 (41%), Gaps = 100/441 (22%)
Query: 78 TENPSTA---------IWNQMIRGHARSE--TPEKSVYLYKQMIDKETEPDEYTYSFLLS 126
E+PS A +WN MIR + T + + Y Q + P+ +T+ +LL
Sbjct: 40 VEDPSAASRLDCANVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLK 99
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPAR 185
+EGE+VH V+ +G+ + F+ L+ Y+ CG VG R +FD+M
Sbjct: 100 ALVSGQEVKEGEEVHASVVRTGFACSEFVSGALLGFYV----ACGLVGKGRQVFDEMRQP 155
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
+V W +++ YV F E +AL LF MR
Sbjct: 156 GLVLWTLIIRAYVC--------VTFPE-----------------------KALELFRTMR 184
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC 305
+ D VA+ +SAC +GDL + K +H ++E++ G E V +++ LI Y C
Sbjct: 185 EVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKS---GIE-VDAFVSSTLISTYGEC 240
Query: 306 GEIEEAY-------------------------------GVFRKMQRRNTVSWTSMITGFA 334
G ++ AY +F+ M R+ VSW SMI GFA
Sbjct: 241 GSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFA 300
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
+ G QEAL LT L LSAC+ G +D G +++N +
Sbjct: 301 RIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKN-DMNRDG 359
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV- 438
++D++S+ G +D+A + + + + S++ G +H E A K+
Sbjct: 360 SLDSSLIDMYSKCGDIDKAVQIFEE-STRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKE 418
Query: 439 AEIDPEQAAGYLALVANVYAA 459
A++ P+ L A +A
Sbjct: 419 AQVQPDDVTMVGVLSACAHAG 439
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%)
Query: 12 ATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINA 71
S ALT S T IH+ + N ++ + + L+ Y G + A
Sbjct: 319 GVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKA 378
Query: 72 HKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARC 131
++FE++ W ++ G A EK+++ + +M + + +PD+ T +LS CA
Sbjct: 379 VQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHA 438
Query: 132 GLFREG 137
GL +G
Sbjct: 439 GLLDQG 444
>gi|297739912|emb|CBI30094.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 167/499 (33%), Positives = 288/499 (57%), Gaps = 41/499 (8%)
Query: 49 SQKNYIL-AKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYK 107
++KN + ++ Y+ S + +A K+F + N + WN MI G+A++ + ++YL++
Sbjct: 126 AKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFE 185
Query: 108 QMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSG 167
+M E + +++ ++S+ A+CG E ++ R+ S + L++ L
Sbjct: 186 KM----PERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLLDEALD-- 239
Query: 168 GECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISG 227
LF+ MP R + SWN+++ G ++ GD+ A K+F+EMP +NV+SWTTMI+G
Sbjct: 240 ----------LFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITG 289
Query: 228 CAQNGKSRQALSLFNEMRRAR-VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVG 286
C Q G+S +AL +F+ M +Q V+ L AC+ + L G+ +H + + +V
Sbjct: 290 CVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISK--TVY 347
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRK--MQRRNTVSWTSMITGFAKQGYAQEAL- 343
++ V +ALI+MY+ CGE+ A +F +R+ VSW +I +A GY +EA+
Sbjct: 348 QDSTFVV--SALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAIN 405
Query: 344 --------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLF 389
+T++G+LSACSH G V+EG ++F+ + ++ I R +HY C+VDL
Sbjct: 406 FFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLC 465
Query: 390 SRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGY 449
RAG + EAF ++ + KP+ V G+LL GC +H N ++ Q A+KL+ E++PE A Y
Sbjct: 466 GRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLL-EVEPENAGTY 524
Query: 450 LALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLI 509
L L++N+YA+ +W++ A VR KM G++K PG SW+++ +H FV GD ++ Q+ LI
Sbjct: 525 L-LLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNRVHVFVVGDKSHSQSKLI 583
Query: 510 YKTLGEITMQAMQEGYKPD 528
Y L ++ + + GY+P+
Sbjct: 584 YSLLRDLHSKMKKAGYEPN 602
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 180/367 (49%), Gaps = 54/367 (14%)
Query: 28 QIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVF-------EKTEN 80
+ N T+ F I QI I N L ++ FY+ + IN ++ + T +
Sbjct: 9 DVGNFTRMPFLICVQITIPALI--NLKLLRIPGFYLY--HSINDYRTAKISIPRKDFTVD 64
Query: 81 PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
+ A N MI ++ + + +++ D+ EPD T++ ++S +CG+ E ++
Sbjct: 65 GNVARCNWMITNLSK----DGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRL 120
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKR 200
RV A NV T ++ Y+ S + A LF++MP ++VVSWN+++ GY +
Sbjct: 121 FDRVDAK---KNVVTWTAMVGGYIRSN---KISDAEKLFNEMPNKNVVSWNTMIDGYAQN 174
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
G ID A +F++MP RNVVSW T++S AQ G+ +A LF+ M V + A++A L
Sbjct: 175 GRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDV-ISWTAMIAGL 233
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
E DL F E L S N + + + G++ A +F +M +
Sbjct: 234 --LDEALDL-------------FERMPERDLPSWNTMITGLIQN-GDLRRARKLFNEMPK 277
Query: 321 RNTVSWTSMITGFAKQGYAQEALL----------------TFLGVLSACSHGGFVDEGRQ 364
+N +SWT+MITG ++G ++EAL TF+ VL ACS+ + EG+Q
Sbjct: 278 KNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQ 337
Query: 365 FFECMNQ 371
+ +++
Sbjct: 338 VHQIISK 344
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 117/260 (45%), Gaps = 23/260 (8%)
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
+V N ++ K G I A ++FDEM +V++WTT+ISG + G +A LF+ +
Sbjct: 66 NVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVD 125
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC 305
+ + A+V +I D E+ F+ +VS N +I YA
Sbjct: 126 AKKNVVTWTAMVGGYIRSNKISD----------AEKLFNEMPNKNVVSW-NTMIDGYAQN 174
Query: 306 GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF-----LGVLSACSH-GGFV 359
G I+ A +F KM RN VSW ++++ A+ G +EA F V+S + G +
Sbjct: 175 GRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLL 234
Query: 360 DEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLL 419
DE FE M + + + M+ + G + A L MP K N +++
Sbjct: 235 DEALDLFERMPER-----DLPSWNTMITGLIQNGDLRRARKLFNEMP-KKNVISWTTMIT 288
Query: 420 GCRIHNNAELASQVAQKLVA 439
GC +E A ++ ++++
Sbjct: 289 GCVQEGESEEALKIFSRMLS 308
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEK--TENPSTAIWNQMIRGHAR 95
Q+H I + ++++ L+ Y G L A K+F+ T WN +I +A
Sbjct: 337 QVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAH 396
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
++++ +K+M +PD+ TY LLS C+ GL EG
Sbjct: 397 HGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEG 438
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 160/459 (34%), Positives = 265/459 (57%), Gaps = 26/459 (5%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
L++ YV S + A ++F+K S W M+ G+ + +S+ L++QM + PD
Sbjct: 308 LVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPD 367
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCAR 176
E +LS C F G VH ++ G + F+ L++LY +CG + A
Sbjct: 368 EVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLY----AKCGKLDEAL 423
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
F+ +P +S SWNS+L G+ + G +D A F+++P +++VSW TM++ ++ +
Sbjct: 424 RTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNE 483
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
+ +F +M+ + V D+ L++ LS+CA++G L G W++ Y+E+N +G + +L
Sbjct: 484 SFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKN-EIGIDAML---GT 539
Query: 297 ALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------- 343
ALI MY CG +E AY +F ++ +N WT+M+ +A +G A EA+
Sbjct: 540 ALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKP 599
Query: 344 --LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
+TF+ +L+ACSHGG VDEG ++F + + I P I HYGCMVDL R G ++E
Sbjct: 600 DHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKF 659
Query: 402 VQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAK 461
++ MP++P+ ++ SL+ CR H+N ELA Q ++L+ EIDP ++ L++N+YA A
Sbjct: 660 IERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLI-EIDPTNNGAHV-LLSNIYADAG 717
Query: 462 RWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
RW DV+ VR K+ + GV K PG + ++ NGV+H+FVA +
Sbjct: 718 RWDDVSKVRTKLHETGVPKQPGFTMIEQNGVVHEFVASN 756
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 123/392 (31%), Positives = 198/392 (50%), Gaps = 43/392 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H +I+ GF + + L+ Y G L ++FEK + WN MI +
Sbjct: 154 EVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKG 213
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ L+ +M+ PDE T L+S CA+ G+++H ++ + ++IR
Sbjct: 214 MYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDN----KLWIRG 269
Query: 158 NLMNLYLMSGGECG-VGCARLLFD--DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP 214
+L+N + +CG + A L D VV W +L+ GYVK ID A ++FD+M
Sbjct: 270 SLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMN 329
Query: 215 HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKW 274
R++VSWTTM+SG Q G ++L LF +MR V D+VALV LSAC + D LG+
Sbjct: 330 ERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRS 389
Query: 275 IHSYVEENFSVGREPVLVS--LNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
+H+++ + G +LV L NAL+ +YA CG+++EA F ++ ++ SW SM+ G
Sbjct: 390 VHAFI---VTYG---MLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDG 443
Query: 333 FAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRA 392
F C GG VD+ R FF N + I + MV+ + +
Sbjct: 444 F-------------------CRSGG-VDKARDFF-----NKIPEKDIVSWNTMVNAYVKH 478
Query: 393 GLMDEAFSL---VQNMPMKPNDAVLGSLLLGC 421
L +E+F + +Q+ +KP+ L SLL C
Sbjct: 479 DLFNESFEIFCKMQSSNVKPDKTTLISLLSSC 510
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 129/472 (27%), Positives = 209/472 (44%), Gaps = 109/472 (23%)
Query: 10 NPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLI 69
NP TS L I LL+ + + IH+ +I I +++LAF ++ L
Sbjct: 25 NPKTSHSVLRPHWIIDLLKSCSNIREFSPIHAHLITANLIHDPEITSQVLAFLLSVNNLD 84
Query: 70 NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
AH++ + P + IWN ++ + P++ + Y M+ + D T+ FL+ C
Sbjct: 85 CAHQILSYSHEPESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACC 144
Query: 130 RCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVV 188
+ + G +VHGR+L G+ N + NLM LY +CG + LF+ M R V+
Sbjct: 145 KNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLY----SKCGKLKEVCQLFEKMTHRDVI 200
Query: 189 SWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR 248
SWN+++ YV +G A +FDEM ++SG
Sbjct: 201 SWNTMISCYVLKGMYREALDLFDEM----------LVSG--------------------- 229
Query: 249 VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEI 308
V D++ +V+ +S CA++ DL++GK +H Y+ +N + + SL N L+ MY+ CG++
Sbjct: 230 VLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDN----KLWIRGSLLNCLVDMYSKCGKM 285
Query: 309 EEAYG---------------------------------VFRKMQRRNTVSWTSMITGFAK 335
+EA+G +F KM R+ VSWT+M++G+ +
Sbjct: 286 DEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQ 345
Query: 336 QGYAQEALLTF---------------LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
GY E+L F + VLSAC H D GR + I
Sbjct: 346 GGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGR----------SVHAFIV 395
Query: 381 HYGCMV---------DLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG-CR 422
YG +V DL+++ G +DEA + +P K + A S+L G CR
Sbjct: 396 TYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCK-SAASWNSMLDGFCR 446
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 119/255 (46%), Gaps = 25/255 (9%)
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
++D A +I + W T++ + G ++ L + M V LD +
Sbjct: 81 NNLDCAHQILSYSHEPESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLI 140
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
AC + D+KLG +H + + GR SLNN L+ +Y+ CG+++E +F KM
Sbjct: 141 HACCKNFDVKLGSEVHGRILK-CGFGRNK---SLNNNLMGLYSKCGKLKEVCQLFEKMTH 196
Query: 321 RNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQF 365
R+ +SW +MI+ + +G +EAL +T + ++S C+ ++ G++
Sbjct: 197 RDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRL 256
Query: 366 --FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRI 423
+ N+ W R C+VD++S+ G MDEA L+ D VL + L+ +
Sbjct: 257 HLYIVDNKLW---IRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYV 313
Query: 424 HNNA-ELASQVAQKL 437
+N + A Q+ K+
Sbjct: 314 KSNKIDKARQLFDKM 328
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 170/510 (33%), Positives = 281/510 (55%), Gaps = 26/510 (5%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H+Q I G + +L YV +++A +VF+ + + WN MI G+++
Sbjct: 159 VHAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSKMGF 218
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
++++ L+++M+ E D +T LLS ++ G VH ++ +G + +
Sbjct: 219 CDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVTNA 278
Query: 159 LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y +CG + A+ +FD M + VVSW S++ Y +G ++ A +IF+ MP +N
Sbjct: 279 LIDMY----AKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKN 334
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VVSW ++I Q G+ +A+ LF+ M + V D LV+ LS C+ GDL LGK H
Sbjct: 335 VVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAHC 394
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y+ +N V V+L N+LI MYA CG ++ A +F M +N VSW +I A G
Sbjct: 395 YICDNIIT----VSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHG 450
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+ +EA+ +TF G+LSACSH G VD GR +F+ M + I P +EHY
Sbjct: 451 FGEEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRYYFDIMISTFRISPGVEHY 510
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
CMVDL R G + EA +L+Q MP+KP+ V G+LL CRI+ N E+A Q+ ++L+ E+
Sbjct: 511 ACMVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLGACRIYGNLEIAKQIMKQLL-ELG 569
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
+ Y+ L++N+Y+ ++RW D+ +R+ M G++K S+++I+G + F+ D
Sbjct: 570 RFNSGLYV-LLSNMYSESQRWDDMKKIRKIMDDSGIKKCRAISFIEIDGCCYQFMVDDKR 628
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISEL 532
+ ++ IY L ++ GY SE+
Sbjct: 629 HCASTGIYSILDQLMDHLKSVGYPCKSSEV 658
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 171/336 (50%), Gaps = 48/336 (14%)
Query: 16 KALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVF 75
K+ T + + LL ++ K L +H+QII++G + + L KLL+ V G L AH +F
Sbjct: 35 KSPTHQTLHHLLDQCSSMKRLKLVHAQIILHGLAAQVVTLGKLLSLCVQEGDLRYAHLLF 94
Query: 76 EKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFR 135
++ P+ ++N +IRG++ S P KS+ L++QM+ P+++T+ F+L CA +
Sbjct: 95 DQIPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPFYW 154
Query: 136 EGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGC-----ARLLFDDMPARSVVSW 190
E VH + + G + ++ ++ Y V C AR +FDD+ R++VSW
Sbjct: 155 EAVIVHAQAIKLGMGPHACVQNAILTAY--------VACRLILSARQVFDDISDRTIVSW 206
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG 250
NS++ GY K G D +A+ LF EM + V
Sbjct: 207 NSMIAGYSKMGFCD-------------------------------EAILLFQEMLQLGVE 235
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEE 310
D LV+ LSA ++ +L LG+++H Y+ G E + + NALI MYA CG ++
Sbjct: 236 ADVFTLVSLLSASSKHCNLDLGRFVHLYI---VITGVE-IDSIVTNALIDMYAKCGHLQF 291
Query: 311 AYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
A VF +M ++ VSWTSM+ +A QG + A+ F
Sbjct: 292 AKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIF 327
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 73/177 (41%), Gaps = 3/177 (1%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q H I N + + L+ Y G L A +F + WN +I A
Sbjct: 391 QAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHG 450
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E+++ ++K M PDE T++ LLS C+ GL G ++++ S
Sbjct: 451 FGEEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRYYFDIMISTFRISPGVEHY 510
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPAR-SVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
M L GG +G A L MP + VV W +LL G+++ A +I ++
Sbjct: 511 ACMVDLLGRGG--FLGEAMTLIQKMPVKPDVVVWGALLGACRIYGNLEIAKQIMKQL 565
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 176/510 (34%), Positives = 275/510 (53%), Gaps = 59/510 (11%)
Query: 48 FSQKNY----ILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSV 103
F Q N+ L+A Y GY+ A ++F++ WN MI G+A+ ++++
Sbjct: 187 FDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEAL 246
Query: 104 YLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLY 163
L++ M P+E T +LS CA+ G + + G CSN+
Sbjct: 247 LLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNL---------- 296
Query: 164 LMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTT 223
+L+ N+L+ Y K GD+ A ++FD+M R+V+SW
Sbjct: 297 ------------KLV------------NALIDMYSKCGDLQTARELFDDMLERDVISWNV 332
Query: 224 MISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENF 283
MI G ++AL+LF EM + V ++ ++ L +CA +G + LGKWIH+Y+ +NF
Sbjct: 333 MIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNF 392
Query: 284 SVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL 343
+ V SL+ +LI +YA CG I A VF M+ ++ SW +MI G A G A +A
Sbjct: 393 NS----VSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAF 448
Query: 344 ---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDL 388
+TF+G+LSAC H G VD G+QFF M Q++ I P+ +HYGCM+DL
Sbjct: 449 ELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDL 508
Query: 389 FSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAG 448
RAGL +EA SL+QNM +KP+ A+ GSLL CR H EL VA++L E++P+
Sbjct: 509 LGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLF-ELEPDNPGA 567
Query: 449 YLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASL 508
Y+ L++N+YA A +W DVA +R ++ G++K PG + ++++ V+H+F+ GD + Q+
Sbjct: 568 YV-LLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSED 626
Query: 509 IYKTLGEITMQAMQEGYKPDISELFLGIEE 538
IY+ L E+ Q G+ D SE+ ++E
Sbjct: 627 IYRMLEEVDEQLKVFGFVADTSEVLYDMDE 656
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 161/530 (30%), Positives = 259/530 (48%), Gaps = 61/530 (11%)
Query: 16 KALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHK 73
+ L LL + +T QIH+ II G + L+KL+ F S G + A
Sbjct: 25 RVLQEHPSLKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAIS 84
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGL 133
+F E P+ IWN MIRG + S +P ++ + +MI EP+ YT+ FLL CA+
Sbjct: 85 LFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLAS 144
Query: 134 FREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSL 193
EG+Q+H VL G+ S+VFI T+L+N+Y SG + A+L+FD R +S+ +L
Sbjct: 145 AHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGE---MNNAQLVFDQSNFRDAISFTAL 201
Query: 194 LKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQ 253
+ GY G +D A ++FDEMP ++VVSW MI+G AQ G+S++AL LF +MR+A V ++
Sbjct: 202 IAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNE 261
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
+V+ LSACA+ L LG + S++E+ + L NALI MY+ CG+++ A
Sbjct: 262 STIVSVLSACAQSNALDLGNSMRSWIEDRGLCSN----LKLVNALIDMYSKCGDLQTARE 317
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGF 358
+F M R+ +SW MI G+ +EAL +TFL +L +C+H G
Sbjct: 318 LFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGA 377
Query: 359 VDEGRQFFECMNQNW-----------------------------GIKPR-IEHYGCMVDL 388
+D G+ +N+N+ G+K + + + M+
Sbjct: 378 IDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICG 437
Query: 389 FSRAGLMDEAFSLVQNMP---MKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQ 445
+ G D+AF L M ++PN+ +L C+ +L Q +V +
Sbjct: 438 LAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISP 497
Query: 446 AAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHD 495
+ + + ++ A +++ ++ Q M KP G W + G D
Sbjct: 498 KSQHYGCMIDLLGRAGLFEEAESLLQNM----EVKPDGAIWGSLLGACRD 543
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 186/536 (34%), Positives = 276/536 (51%), Gaps = 59/536 (11%)
Query: 17 ALTTRQIFSLLQIRNTTKTLFQ---IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHK 73
AL S+L +T+K L IHS I +G S I L++ Y G L A +
Sbjct: 327 ALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARE 386
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGL 133
+F WN +I G+AR E +++ LYKQM + +P T+ LLS CA
Sbjct: 387 LFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSA 446
Query: 134 FREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSL 193
+ +G+ +H +L SG SN + LMN+Y CG SL
Sbjct: 447 YADGKMIHEDILRSGIKSNGHLANALMNMYR----RCG--------------------SL 482
Query: 194 LKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQ 253
++ A +F+ R+V+SW +MI+G AQ+G A LF EM+ + D
Sbjct: 483 ME----------AQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDN 532
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
+ + LS C L+LGK IH + E+ G + + V+L NALI+MY CG +++A
Sbjct: 533 ITFASVLSGCKNPEALELGKQIHGRITES---GLQ-LDVNLGNALINMYIRCGSLQDARN 588
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGG 357
VF +Q R+ +SWT+MI G A QG +A+ TF +LSAC+H G
Sbjct: 589 VFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAG 648
Query: 358 FVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSL 417
V EG Q F M +G+ P IEHYGC+V L RA EA +L+ MP P+ AV +L
Sbjct: 649 LVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETL 708
Query: 418 LLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMG 477
L CRIH N LA A + +++ A Y+ L++NVYAAA RW DVA +R+ M G
Sbjct: 709 LGACRIHGNIALAEHAANNAL-KLNARNPAVYI-LLSNVYAAAGRWDDVAKIRRVMEGRG 766
Query: 478 VRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELF 533
+RK PG+SW++++ ++H+F+A D ++ + + IY L ++++ + GY PD +
Sbjct: 767 IRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVL 822
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 183/411 (44%), Gaps = 62/411 (15%)
Query: 19 TTRQIFSLLQIRNTTKTLF----QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKV 74
T R + L T K L +IH+Q++ G ++ L+ YV +++AH+V
Sbjct: 25 TDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQV 84
Query: 75 FEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLF 134
F++ WN +I +A+ +K+ L+++M + P++ TY +L+ C
Sbjct: 85 FKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAEL 144
Query: 135 REGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSL 193
G+++H +++ +GY + ++ +L+++Y G+CG + AR +F + R VVS+N++
Sbjct: 145 ENGKKIHSQIIKAGYQRDPRVQNSLLSMY----GKCGDLPRARQVFAGISPRDVVSYNTM 200
Query: 194 LKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQ 253
L Y AQ ++ L LF +M + D+
Sbjct: 201 LGLY-------------------------------AQKAYVKECLGLFGQMSSEGISPDK 229
Query: 254 VALVAALSACAEIGDLKLGKWIHSY-VEENFSVGREPVLVSLNNALIHMYASCGEIEEAY 312
V + L A L GK IH VEE + + + AL+ M CG+++ A
Sbjct: 230 VTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSD-----IRVGTALVTMCVRCGDVDSAK 284
Query: 313 GVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGG 357
F+ + R+ V + ++I A+ G+ EA T+L +L+ACS
Sbjct: 285 QAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSK 344
Query: 358 FVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
++ G+ ++++ G ++ ++ +++R G + +A L MP +
Sbjct: 345 ALEAGKLIHSHISED-GHSSDVQIGNALISMYARCGDLPKARELFYTMPKR 394
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 145/302 (48%), Gaps = 54/302 (17%)
Query: 112 KETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG 171
+ TE D TY LL C R L E +++H +++ +G ++F+ L+N+Y
Sbjct: 21 RPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMY-------- 72
Query: 172 VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQN 231
V C RSV+ A ++F EMP R+V+SW ++IS AQ
Sbjct: 73 VKC----------RSVLD----------------AHQVFKEMPRRDVISWNSLISCYAQQ 106
Query: 232 GKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL 291
G ++A LF EM+ A +++ ++ L+AC +L+ GK IHS + + R+P
Sbjct: 107 GFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKA-GYQRDP-- 163
Query: 292 VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------- 343
+ N+L+ MY CG++ A VF + R+ VS+ +M+ +A++ Y +E L
Sbjct: 164 -RVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSS 222
Query: 344 -------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMD 396
+T++ +L A + +DEG++ + + G+ I +V + R G +D
Sbjct: 223 EGISPDKVTYINLLDAFTTPSMLDEGKRIHK-LTVEEGLNSDIRVGTALVTMCVRCGDVD 281
Query: 397 EA 398
A
Sbjct: 282 SA 283
>gi|413944077|gb|AFW76726.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 646
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 174/519 (33%), Positives = 283/519 (54%), Gaps = 27/519 (5%)
Query: 23 IFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAK-LLAFYVTSGYLINAHKVFEKTENP 81
+F++ ++ IH GF ++ + L+ Y +S L +A K+F++ +
Sbjct: 136 VFAVKAAATSSSPTEAIHCVAFKRGFIGQSVLAGNALVHMYTSSMLLPDARKLFDEMADR 195
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKETE-PDEYTYSFLLSVCARCGLFREGEQV 140
W +I G+AR P+++ ++ +M+ E+ P+E T S + GL G V
Sbjct: 196 DVVSWTTLIDGYARGGLPDEAWRVFCRMVVAESVWPNEVTLVAAASAAGQMGLLGLGRTV 255
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVK 199
H ++ SG +V + L++++ G+CG V A+ +FD MP + V SW S++ Y K
Sbjct: 256 HQCIVESGGRMSVNLENALVDMF----GKCGCVAAAKEVFDGMPIKDVYSWTSMVSAYAK 311
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
GD++ A K+F E+P+RNVVSW+ M++ + +A+ +FN+M A V LV+
Sbjct: 312 CGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVEPIDATLVSV 371
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
LSACA++ L +G W++ + V P +L+NA I M+A CG++ A +F M+
Sbjct: 372 LSACAQLCSLDVGTWLYDTYIVSHKVELTP---NLSNAFIDMFAKCGDVGAASRLFSNME 428
Query: 320 RRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQ 364
+N VSW +MI G +EAL T++GVLSACSHGG V EGR
Sbjct: 429 DKNVVSWNTMIMAHGLHGQPEEALHLFQEFKGNGILPDEATYIGVLSACSHGGLVSEGRC 488
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
F+ M +GI+PR EHY CM+DL + GL+ EAF + ++MP+ ++A G+LL CR+H
Sbjct: 489 HFKEMKIVYGIEPRAEHYACMIDLLGKVGLLQEAFEVARSMPVGADEAGWGALLNACRMH 548
Query: 425 NNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQ 484
N E+ A KL A +DP + Y+ L++ +YA+ +W V +R M V+K PG
Sbjct: 549 GNVEIGKCAADKL-AGLDPSDSGIYV-LMSQIYASKSKWGQVKMLRTVMRDRRVKKNPGC 606
Query: 485 SWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQE 523
S ++++G H+F+ D ++ + IY LG I + + E
Sbjct: 607 SSIEVDGKCHEFLVADVSHVHSEDIYAALGNIYLHSKAE 645
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 188/416 (45%), Gaps = 71/416 (17%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAH 72
T+ + T + S+L+ + + L Q+ + + ++G + + ++LLAF S AH
Sbjct: 24 TNCNLVVTHPLLSVLESCASFRRLLQLQALLTVSGLASNRFPASRLLAFCALSDPPRLAH 83
Query: 73 K---VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
+ + TE P+ + M+RG R+ P ++ L+++++ D T F + A
Sbjct: 84 AAAVLAQCTEGPNAYMLATMMRGFLRAGKPTHALTLFRRVLRDRLAVDARTIVFAVKAAA 143
Query: 130 RCGLFREGEQVHGRVLASGYCSNVFIRTN-LMNLYLMSGGECGVGCARLLFDDMPARSVV 188
E +H G+ + N L+++Y S + AR LFD+M R VV
Sbjct: 144 TSS--SPTEAIHCVAFKRGFIGQSVLAGNALVHMYTSS---MLLPDARKLFDEMADRDVV 198
Query: 189 SWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR 248
SW +L+ GY + G D AW++F M VV+ +
Sbjct: 199 SWTTLIDGYARGGLPDEAWRVFCRM----VVAES-------------------------- 228
Query: 249 VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEI 308
V ++V LVAA SA ++G L LG+ +H + E S GR + V+L NAL+ M+ CG +
Sbjct: 229 VWPNEVTLVAAASAAGQMGLLGLGRTVHQCIVE--SGGR--MSVNLENALVDMFGKCGCV 284
Query: 309 EEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFEC 368
A VF M ++ SWTSM++ +AK G + A + F E
Sbjct: 285 AAAKEVFDGMPIKDVYSWTSMVSAYAKCGDLENA-------------------AKLFKEI 325
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM---PMKPNDAVLGSLLLGC 421
N+N + + CMV +S A + DEA + +M ++P DA L S+L C
Sbjct: 326 PNRN------VVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVEPIDATLVSVLSAC 375
>gi|242047426|ref|XP_002461459.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
gi|241924836|gb|EER97980.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
Length = 568
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 194/557 (34%), Positives = 288/557 (51%), Gaps = 80/557 (14%)
Query: 13 TSSKALTTRQIFSLLQIR---NTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS---G 66
T S R +LL++ + T+ Q+H++ + G + +LAK L F++ S
Sbjct: 9 TPSTHPALRHCVALLRLHLAAPSLATVKQLHARALRAGVPPAHPLLAKHLLFHLASLRAP 68
Query: 67 YLINAHKVFEKT-ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
L A V + +P N ++R A S P ++ L+ + + PD +TY LL
Sbjct: 69 PLRYAVAVLTRVLPDPDPFSLNTVLRIAASSSRPSLALALHARRL---APPDTHTYPPLL 125
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV-GCARLLFDDMPA 184
CAR R GE++H +G + VF++ +L++LY G CG+ A +FD++P
Sbjct: 126 QACARLLSLRHGERIHAEAAKNGLATLVFVKNSLVHLY----GACGLFESAHRVFDEIPV 181
Query: 185 --RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
R++VSWNS+L G+ A NG+ + L++F
Sbjct: 182 GERNLVSWNSMLNGF-------------------------------AANGRPNEVLTIFR 210
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVE-----ENFSVGREPVLVSLNNA 297
EM D +V+ L+A AEIG L LG+ +H Y+ EN VG NA
Sbjct: 211 EMLDVNFMPDGFTVVSVLTASAEIGALALGRRVHVYLTKVGLVENSHVG---------NA 261
Query: 298 LIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAKQGYAQEAL------------- 343
LI +YA CG +E+A VF +M RR VSWTS+I G A G+ +EAL
Sbjct: 262 LIDLYAKCGGVEDARRVFEEMGARRTVVSWTSLIVGLAVNGFGKEALELFGIMEREKLVP 321
Query: 344 --LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
+T +GVL ACSH G VD+G +F M + + I PRIEH GCMVDL RAG + EA+
Sbjct: 322 TEITMVGVLYACSHCGLVDDGFMYFNRMKEEYNIAPRIEHLGCMVDLLGRAGKVKEAYDY 381
Query: 402 VQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAK 461
+ MP++PN V +LL C +H EL +LV E+DP + Y+ L++N+YAA
Sbjct: 382 ILTMPLEPNAVVWRTLLGACAMHKKLELGEAAWARLV-ELDPGHSGDYV-LLSNLYAAVG 439
Query: 462 RWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAM 521
RW DV +R+ M+K GVRK PG+S V++ +++FV GD ++ ++ IY+ L E+
Sbjct: 440 RWADVHVLRKTMVKDGVRKNPGRSLVELRNSVYEFVMGDRSHPESEQIYQMLAEVADSLR 499
Query: 522 QEGYKPDISELFLGIEE 538
+EGY P S + IEE
Sbjct: 500 REGYIPRTSNVLADIEE 516
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 176/509 (34%), Positives = 286/509 (56%), Gaps = 37/509 (7%)
Query: 49 SQKNYILAK---LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYL 105
S++N+ L LL +V ++ A + F+ WN +I G+A+S +++
Sbjct: 213 SRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEA--- 269
Query: 106 YKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLM 165
+Q+ D+ D +T++ ++S + + E ++ ++ S N M +
Sbjct: 270 -RQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVS-----WNAMLAGYV 323
Query: 166 SGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMI 225
G + A+ LFD MP R+V +WN+++ GY + G I A +FD+MP R+ VSW MI
Sbjct: 324 QGERMEM--AKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMI 381
Query: 226 SGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS-YVEENFS 284
+G +Q+G S +AL LF +M R L++ + +ALS CA++ L+LGK +H V+ +
Sbjct: 382 AGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYE 441
Query: 285 VGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL- 343
G + NAL+ MY CG IEEA +F++M ++ VSW +MI G+++ G+ + AL
Sbjct: 442 TG-----CFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALR 496
Query: 344 --------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLF 389
T + VLSACSH G VD+GRQ+F M Q++G+ P +HY CMVDL
Sbjct: 497 FFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLL 556
Query: 390 SRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGY 449
RAGL+++A +L++NMP +P+ A+ G+LL R+H N ELA A K+ A ++PE + Y
Sbjct: 557 GRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFA-MEPENSGMY 615
Query: 450 LALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLI 509
+ L++N+YA++ RW DV +R +M GV+K PG SW++I H F GD + + I
Sbjct: 616 V-LLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEI 674
Query: 510 YKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ L E+ ++ + GY S + +EE
Sbjct: 675 FAFLEELDLRMKKAGYVSKTSVVLHDVEE 703
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 192/443 (43%), Gaps = 107/443 (24%)
Query: 63 VTSGYLIN-----AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
+ SGYL N A K+F++ WN MI+G+ R+ K+ L++ M E D
Sbjct: 101 MISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIM----PERD 156
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRV----------LASGYCSNVFIRTNLM------N 161
+++ +LS A+ G + V R+ L S Y N + M N
Sbjct: 157 VCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSREN 216
Query: 162 LYLMSGGECGVGC---------ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDE 212
L+S C +G AR FD M R VVSWN+++ GY + G ID A ++FDE
Sbjct: 217 WALVSWN-CLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE 275
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
P ++V +WT M+SG QN +A LF++M ++V+ A L+ + +++
Sbjct: 276 SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMA 331
Query: 273 KWIHSYVEENFSVGREPVL-VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMIT 331
K E F V P VS N +I YA CG+I EA +F KM +R+ VSW +MI
Sbjct: 332 K-------ELFDV--MPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIA 382
Query: 332 GFAKQGYAQEALLTFL---------------GVLSACS-----------HG--------- 356
G+++ G++ EAL F+ LS C+ HG
Sbjct: 383 GYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET 442
Query: 357 ---------------GFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
G ++E F+ M I + M+ +SR G + A
Sbjct: 443 GCFVGNALLLMYCKCGSIEEANDLFKEM-----AGKDIVSWNTMIAGYSRHGFGEVALRF 497
Query: 402 VQNMP---MKPNDAVLGSLLLGC 421
++M +KP+DA + ++L C
Sbjct: 498 FESMKREGLKPDDATMVAVLSAC 520
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 159/361 (44%), Gaps = 70/361 (19%)
Query: 59 LAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDE 118
++ Y+ +G A +VF++ S+ +N MI G+ R+ E L +++ D+ E D
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFE----LARKLFDEMPERDL 126
Query: 119 YTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLL 178
+++ V+ GY N +G AR L
Sbjct: 127 VSWN---------------------VMIKGYVRNR-----------------NLGKAREL 148
Query: 179 FDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQAL 238
F+ MP R V SWN++L GY + G +D A +FD MP +N VSW ++S QN K +A
Sbjct: 149 FEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEAC 208
Query: 239 SLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNAL 298
LF + ALV+ C G +K K + + + F +VS N +
Sbjct: 209 MLFKSR-------ENWALVSW--NCLLGGFVKKKKIVEA--RQFFDSMNVRDVVSW-NTI 256
Query: 299 IHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-----------LTFL 347
I YA G+I+EA +F + ++ +WT+M++G+ + +EA +++
Sbjct: 257 ITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWN 316
Query: 348 GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM 407
+L+ G ++ ++ F+ M + + M+ +++ G + EA +L MP
Sbjct: 317 AMLAGYVQGERMEMAKELFDVMPCR-----NVSTWNTMITGYAQCGKISEAKNLFDKMPK 371
Query: 408 K 408
+
Sbjct: 372 R 372
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 28/234 (11%)
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
+ WN + Y++ G + A ++F MP + VS+ MISG +NG+ A LF+EM
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC 305
D V+ + + + LGK E F + E + S N ++ YA
Sbjct: 123 ER----DLVSWNVMIK--GYVRNRNLGK-----ARELFEIMPERDVCSW-NTMLSGYAQN 170
Query: 306 GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLG------VLSACSHGGFV 359
G +++A VF +M +N VSW ++++ + + +EA + F V C GGFV
Sbjct: 171 GCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFV 230
Query: 360 D-----EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
E RQFF+ MN + + ++ ++++G +DEA L P++
Sbjct: 231 KKKKIVEARQFFDSMNVR-----DVVSWNTIITGYAQSGKIDEARQLFDESPVQ 279
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 51/102 (50%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H +++ G+ ++ LL Y G + A+ +F++ WN MI G++R
Sbjct: 430 QLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHG 489
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
E ++ ++ M + +PD+ T +LS C+ GL +G Q
Sbjct: 490 FGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 531
>gi|449447707|ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
gi|449510706|ref|XP_004163739.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
Length = 563
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 171/506 (33%), Positives = 282/506 (55%), Gaps = 36/506 (7%)
Query: 36 LFQIHSQIIINGFSQKNYILAKLLAF-YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHA 94
L Q+ +I +G SQ + KL+ F +T L A +F+ +P+ ++ MI +A
Sbjct: 59 LKQLQGFLISHGHSQTQFFAFKLVRFCNLTLADLCYARYIFDNLTSPNVFLYTAMITAYA 118
Query: 95 RSETPEKSVYLYKQMIDK-ETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNV 153
P+ + LY+ M+ + P+ + Y +L C + VH +VL SG+
Sbjct: 119 SYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLGSNATKMVHTQVLKSGFGGYP 178
Query: 154 FIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
++T +++ Y S +G AR +FD+M R+VVSW +++ GY + G+ D A ++F+ M
Sbjct: 179 VVQTAIVDSY--SRFSSDIGSARQMFDEMLERTVVSWTAMISGYARLGNFDSAIELFESM 236
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEM---------RRARVGLDQVALVAALSACA 264
P R+V +W +I+GCAQNG +A+ LF M ++ L +ALSAC
Sbjct: 237 PERDVPAWNALIAGCAQNGFFCEAIWLFKRMVLLALEGNNNDRENKPNKTTLGSALSACG 296
Query: 265 EIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTV 324
G L LGKWIH YV + + G++ + +NAL+ MY CG ++ A VF + +N
Sbjct: 297 HTGMLHLGKWIHGYVFKTYP-GQDSFI---SNALLDMYGKCGNLKVARRVFDMITLKNLT 352
Query: 325 SWTSMITGFAKQGYAQEAL-----------------LTFLGVLSACSHGGFVDEGRQFFE 367
SW S+I A G++ A+ +TF+GVL+AC+HGG V++G +FE
Sbjct: 353 SWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGVLNACTHGGLVEKGYSYFE 412
Query: 368 CMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNA 427
M +++ I+P+IEH+GC++DL RAG +EA +V+ M ++P++ V GSLL C+IH +
Sbjct: 413 MMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNACKIHGRS 472
Query: 428 ELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWV 487
+LA +KL+ E+DP+ GY ++AN+YA +W +V VR+ + + K PG SW+
Sbjct: 473 DLAEYSVKKLI-EMDPKN-GGYRIMLANIYAEFGKWDEVRKVRRLLKEKNAYKTPGCSWI 530
Query: 488 QINGVLHDFVAGDSTYKQASLIYKTL 513
+++ ++ F + D ++ IYKTL
Sbjct: 531 EVDNQVYQFYSFDMSHPSVEEIYKTL 556
>gi|357455473|ref|XP_003598017.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487065|gb|AES68268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 479
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 177/500 (35%), Positives = 275/500 (55%), Gaps = 52/500 (10%)
Query: 11 PATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLIN 70
P ++ T + + +L +T L QIH++I + GF+ + K++ F S +
Sbjct: 3 PKNTTLWKTEQTLMNLFNHCSTLNHLKQIHARIFLTGFNHNLILSGKIIMFCAVSQNMNY 62
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSET-PEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
A VF+K P + +WN MIRG S T +++ +K+M PD +T+SF+L + A
Sbjct: 63 ALNVFDKIPKPDSFLWNTMIRGFGNSTTHSHNAIHFFKRM-QLAHRPDNFTFSFILKIIA 121
Query: 130 RCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVS 189
R G+Q+H + G+ ++ ++R +L+++Y M + A LF++M ++VS
Sbjct: 122 RLRFVNLGKQLHCSLFKFGFENHTYVRNSLIHMYGMLK---DIEIAHQLFEEMYQPNLVS 178
Query: 190 WNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARV 249
WNS++ +V G + A +F +M + NG Q
Sbjct: 179 WNSIIDCHVYCGKYNEAIDLFTKMVQQQ------------HNGMELQP------------ 214
Query: 250 GLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIE 309
D LV LSAC IG L G+ +HS+V + + E +S+ NAL+ MYA CG +E
Sbjct: 215 --DHATLVVTLSACGAIGSLDFGRKVHSFVRDGVNSFGES--ISVFNALVDMYAKCGAVE 270
Query: 310 EAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSAC 353
EAY F M+R+N VSW MI GFA G +EAL +TFL VL AC
Sbjct: 271 EAYETFSNMKRKNVVSWNVMILGFASHGNGEEALALFTRMLHENVERPDEITFLCVLCAC 330
Query: 354 SHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAV 413
SHGG VDEGR++FE MN+++ IKP I+HYGCMVDL RAGL EA+ L+++MP++ N +
Sbjct: 331 SHGGLVDEGRRYFEIMNRDYNIKPTIKHYGCMVDLLGRAGLFVEAYELIKSMPVECNAII 390
Query: 414 LGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKM 473
+LL CR + N EL +V + L+ E++P+ ++ Y+ L+AN+YA+ +W +++ R+ M
Sbjct: 391 WRTLLAACRNYGNVELGEKVRKHLM-ELEPDHSSDYV-LLANMYASTGQWNEMSKERRSM 448
Query: 474 IKMGVRKP-PGQSWVQINGV 492
+ VRKP PG S++ I G
Sbjct: 449 QERRVRKPEPGNSFIGIPGT 468
>gi|297811673|ref|XP_002873720.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319557|gb|EFH49979.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 178/518 (34%), Positives = 286/518 (55%), Gaps = 30/518 (5%)
Query: 38 QIHSQIIINGFSQ--KNYILAKLLAFYVTSGYLINAHKVFEKT--ENPSTAIWNQMIRGH 93
++H+ + +G + ++Y+ L FY +SG + A K+F++ + W ++
Sbjct: 27 ELHAVLTTSGLKKAPRSYLSNALFQFYASSGEIATAQKLFDEIPLSDKDNVDWTTLLSSF 86
Query: 94 ARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNV 153
+R S+ L+ +M K E D + L VCA+ R GEQ HG + G+ ++V
Sbjct: 87 SRFGLLVNSMKLFVEMRRKRVEIDHVSLVCLFGVCAKLEDLRFGEQGHGVAVKMGFLTSV 146
Query: 154 FIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDE 212
+ LM++Y G+CG V + +F + +SVVSW +L VK + ++FDE
Sbjct: 147 KVCNALMDMY----GKCGFVSEVKRIFQALEEKSVVSWTVVLDTLVKWEGLKRGREVFDE 202
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR-RARVGLDQVALVAALSACAEIGDLKL 271
MP RNVV+WT M++G G +R+ L L EM R GL+ V L + LSACA+ G+L +
Sbjct: 203 MPERNVVAWTLMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVI 262
Query: 272 GKWIHSY-VEENFSVGREPVL--VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTS 328
G+W+H Y +++ +G E V + AL+ MYA CG I+ + VFR M++RN V+W +
Sbjct: 263 GRWVHVYALKKAMMMGEEETYDGVMVGTALVDMYAKCGNIDSSIKVFRLMRKRNVVTWNA 322
Query: 329 MITGFAKQGYAQEAL--------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWG 374
+ +G A G + + LTF +LSACSH G VDEG + F + Q +G
Sbjct: 323 LFSGLAMHGKGRMVIDMFPEMVREVKPDDLTFTALLSACSHLGMVDEGWRCFHSL-QFYG 381
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVA 434
++P+++HY CMVD+ RAG ++EA L++ MP+ PN+ VLGSLL C +H E+A ++
Sbjct: 382 LEPKVDHYACMVDILGRAGRIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKLEIAERIK 441
Query: 435 QKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLH 494
++L+ ++ P Y L++N+Y A R +R + G+RK PG S + +N +H
Sbjct: 442 RELI-QMSPGHTE-YQILMSNMYVAEGRSDIADGLRGSLRNRGIRKIPGLSSIYVNDSVH 499
Query: 495 DFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISEL 532
F +GD ++ + +Y L E+ + GY PDIS L
Sbjct: 500 RFSSGDRSHPRTKEVYLKLNEVIERIRSAGYVPDISGL 537
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 168/496 (33%), Positives = 266/496 (53%), Gaps = 53/496 (10%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
L+ Y + GY+ +A K+F++ WN MI G+A + ++++ L+K+M+ PD
Sbjct: 206 LIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPD 265
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
E T ++S CA+ G G QVH + G+ SN+ I +LM+LY
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLY-------------- 311
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
K G+++ A +F+ + +++V+SW T+I G ++A
Sbjct: 312 --------------------SKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEA 351
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
L LF EM R+ + V +++ L ACA +G + +G+WIH Y+++ SL +
Sbjct: 352 LLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNAS--SLRTS 409
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------------- 343
LI MYA CG+IE A+ VF + ++ SW +MI GFA G A A
Sbjct: 410 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPD 469
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
+TF+G+LSACS G +D GR F M Q++ I P++EHYGCM+DL +GL EA ++
Sbjct: 470 DITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI 529
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKR 462
NM M+P+ + SLL C+I N EL AQ L+ +I+PE Y+ L++N+YA A R
Sbjct: 530 NNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLI-KIEPENPGCYV-LLSNIYATAGR 587
Query: 463 WQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQ 522
W +VA +R + G++K PG S ++I+ V+H+F+ GD + + IY L E+ + +
Sbjct: 588 WNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK 647
Query: 523 EGYKPDISELFLGIEE 538
G+ PD SE+ +EE
Sbjct: 648 AGFVPDTSEVLQEMEE 663
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 152/452 (33%), Positives = 248/452 (54%), Gaps = 27/452 (5%)
Query: 5 EIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVT 64
+P++ +L SLL T ++L IH+Q+I G NY L+KLL V
Sbjct: 18 HFLPSSSDPPYDSLRNHPSLSLLHNCKTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVI 77
Query: 65 SGY---LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
S + L A VFE + P+ IWN M RGHA S P ++ LY MI P+ YT+
Sbjct: 78 SPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTF 137
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDD 181
FLL CA+ F+EG+Q+HG VL GY ++F+ T+L+++Y+ +G + AR +FD
Sbjct: 138 PFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGR---LEDARKVFDR 194
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
P R VVS+ +L+KGY RG I+ A K+FDE+P ++VVSW MISG A+ G ++AL LF
Sbjct: 195 SPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELF 254
Query: 242 NEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHM 301
EM + + D+ +V +SACA+ G ++LG+ +HS+++++ G +V N+L+ +
Sbjct: 255 KEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDH-GFGSNLKIV---NSLMDL 310
Query: 302 YASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF--------------- 346
Y+ CGE+E A G+F + ++ +SW ++I G+ +EALL F
Sbjct: 311 YSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTM 370
Query: 347 LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY-GCMVDLFSRAGLMDEAFSLVQNM 405
L +L AC+H G +D GR +++ ++D++++ G + EA V N
Sbjct: 371 LSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDI-EAAHQVFNS 429
Query: 406 PMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
+ + + +++ G +H A+ A + ++
Sbjct: 430 ILHKSLSSWNAMIFGFAMHGRADAAFDIFSRM 461
>gi|224064340|ref|XP_002301427.1| predicted protein [Populus trichocarpa]
gi|222843153|gb|EEE80700.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 167/440 (37%), Positives = 261/440 (59%), Gaps = 30/440 (6%)
Query: 109 MIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGG 168
M+ K P+E T++FL CA G+ +H + SG+ +V+ T L+++Y G
Sbjct: 1 MLLKGCPPNELTFTFLFPACASFYSLLHGKVIHTHFIKSGFDFDVYALTALVDMYAKLGV 60
Query: 169 ECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGC 228
+ AR +FD+M R + +WNSL+ GY + GD++GA ++F MP R+VVSWTTMISG
Sbjct: 61 ---LMLARQVFDEMTVRDIPTWNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGY 117
Query: 229 AQNGKSRQALSLFNEMRRAR-VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGR 287
+QNG +AL +F +M + + V ++V + + SACA++G L++G+ I SY +N +
Sbjct: 118 SQNGMYTKALEMFLKMEKDKEVRPNEVTIASVFSACAKLGALEVGERIESYARDNGLMKN 177
Query: 288 EPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAKQGYAQEAL--- 343
+ ++N L+ MYA CG+I+ A VF ++ +RRN SW SM+ G A G + EAL
Sbjct: 178 ----LYVSNTLLEMYARCGKIDAARHVFNEIGKRRNLCSWNSMMMGLAVHGRSNEALQLY 233
Query: 344 ------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSR 391
+TF+G++ AC+HGG V +G Q F+ M N+ I P++EHYGCMVDL R
Sbjct: 234 DQMLGEGIEPDDVTFVGLILACTHGGLVAKGWQLFQSMETNFSIVPKLEHYGCMVDLLGR 293
Query: 392 AGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLA 451
AG + EA+ LV++MPMKP+ + G+LL C H+N E A A+ L +++P Y+
Sbjct: 294 AGELQEAYDLVKSMPMKPDSVIWGTLLGACSFHSNVEFAEIAAESLF-QVEPWNPGNYVI 352
Query: 452 LVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYK 511
L N+YA+A+RW VA +R+ M + K G S ++ G +H F+ D ++ + IY
Sbjct: 353 L-CNIYASAQRWDGVAKLRKLMKGGQITKAAGYSVIEGEGEIHKFIVEDKSHPRHYEIYA 411
Query: 512 TLGEIT----MQAMQEGYKP 527
L EI+ +Q ++ +KP
Sbjct: 412 LLNEISTKMKLQITEDDFKP 431
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 138/327 (42%), Gaps = 73/327 (22%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
IH+ I +GF Y L L+ Y G L+ A +VF++ WN +I G++RS
Sbjct: 32 IHTHFIKSGFDFDVYALTALVDMYAKLGVLMLARQVFDEMTVRDIPTWNSLIAGYSRSGD 91
Query: 99 -----------PEKSVYLYKQMI---------------------DKETEPDEYTYSFLLS 126
P +SV + MI DKE P+E T + + S
Sbjct: 92 MEGALELFKLMPSRSVVSWTTMISGYSQNGMYTKALEMFLKMEKDKEVRPNEVTIASVFS 151
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDM-PA 184
CA+ G GE++ +G N+++ L+ +Y CG + AR +F+++
Sbjct: 152 ACAKLGALEVGERIESYARDNGLMKNLYVSNTLLEMY----ARCGKIDAARHVFNEIGKR 207
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
R++ SWNS++ G A +G+S +AL L+++M
Sbjct: 208 RNLCSWNSMMMG-------------------------------LAVHGRSNEALQLYDQM 236
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYAS 304
+ D V V + AC G + G + +E NFS+ P L ++ +
Sbjct: 237 LGEGIEPDDVTFVGLILACTHGGLVAKGWQLFQSMETNFSI--VPKLEHY-GCMVDLLGR 293
Query: 305 CGEIEEAYGVFRKM-QRRNTVSWTSMI 330
GE++EAY + + M + ++V W +++
Sbjct: 294 AGELQEAYDLVKSMPMKPDSVIWGTLL 320
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVF-E 76
+T +FS + +I S NG + Y+ LL Y G + A VF E
Sbjct: 144 VTIASVFSACAKLGALEVGERIESYARDNGLMKNLYVSNTLLEMYARCGKIDAARHVFNE 203
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
+ + WN M+ G A +++ LY QM+ + EPD+ T+ L+ C GL +
Sbjct: 204 IGKRRNLCSWNSMMMGLAVHGRSNEALQLYDQMLGEGIEPDDVTFVGLILACTHGGLVAK 263
Query: 137 GEQV 140
G Q+
Sbjct: 264 GWQL 267
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 187/550 (34%), Positives = 301/550 (54%), Gaps = 34/550 (6%)
Query: 12 ATSSKALTTRQIFSLLQIRNTTKTLFQI---HSQIIINGFSQKNYILAKLLAFYVTSGYL 68
TS+K + L+ + ++ K++ QI H+Q+I KLL + L
Sbjct: 5 TTSAKPFHSDHYSRLVSLIDSCKSMQQIKQTHAQLITTALISHPVSANKLLKLAACAS-L 63
Query: 69 INAHKVFEKTENPSTAIWNQMIRGHARS-ETPEKSVYLYKQMI-DKETEPDEYTYSFLLS 126
AHK+F++ P I+N MI+ H+ S + S+ +++ + D P+ Y++ F S
Sbjct: 64 SYAHKLFDQIPQPDLFIYNTMIKAHSLSPHSCHNSLIVFRSLTQDLGLFPNRYSFVFAFS 123
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPAR 185
C +EGEQV + G +NVF+ L+ +Y G+ G VG ++ +F R
Sbjct: 124 ACGNGLGVQEGEQVRIHAVKVGLENNVFVVNALIGMY----GKWGLVGESQKVFQWAVDR 179
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
+ SWN+L+ YV G++ A ++FD M R+VVSW+T+I+G Q G +AL F++M
Sbjct: 180 DLYSWNTLIAAYVGSGNMSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALDFFHKML 239
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC 305
+ ++ LV+AL+AC+ + L GKWIH+Y+ + E +L S+ I MYA C
Sbjct: 240 QIGPKPNEYTLVSALAACSNLVALDQGKWIHAYIGKGEIKMNERLLASI----IDMYAKC 295
Query: 306 GEIEEAYGVFRKMQRRNTV-SWTSMITGFAKQGYAQEAL---------------LTFLGV 349
GEIE A VF + + + V W +MI GFA G EA+ +TF+ +
Sbjct: 296 GEIESASRVFFEHKVKQKVWLWNAMIGGFAMHGMPNEAINVFEQMKVEKISPNKVTFIAL 355
Query: 350 LSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKP 409
L+ACSHG V+EG+ +F M ++ I P IEHYGCMVDL SR+GL+ EA ++ +MPM P
Sbjct: 356 LNACSHGYMVEEGKLYFRLMVSDYAITPEIEHYGCMVDLLSRSGLLKEAEDMISSMPMAP 415
Query: 410 NDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAV 469
+ A+ G+LL CRI+ + E ++ +++ +DP G L++N+Y+ + RW + +
Sbjct: 416 DVAIWGALLNACRIYKDMERGYRIG-RIIKGMDPNH-IGCHVLLSNIYSTSGRWNEARIL 473
Query: 470 RQK-MIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
R+K I +K PG S +++ G H F+ GD ++ Q+ IY L E+T + GY P+
Sbjct: 474 REKNEISRDRKKIPGCSSIELKGTFHQFLVGDQSHPQSREIYSFLDEMTTKLKSAGYVPE 533
Query: 529 ISELFLGIEE 538
+ EL I++
Sbjct: 534 LGELLHDIDD 543
>gi|359491588|ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61800 [Vitis vinifera]
Length = 576
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 174/521 (33%), Positives = 285/521 (54%), Gaps = 48/521 (9%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQIHSQIIINGF----SQKNYILAKLLAFYVT--------- 64
+ T + ++++ + K L Q+H+ I G + +L +L +
Sbjct: 13 VNTSEAITVIRQCKSLKQLHQVHAHTITTGLLWGLHHSSLLLTNILTAFTALLPTTNASP 72
Query: 65 ------SGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDE 118
+GY A VF + NPST +N MIR H +P ++ ++ +M PD
Sbjct: 73 TTPAALTGY---ALSVFNRIPNPSTFGYNTMIRAHTLLSSPLAALVIFVRMRRLSVPPDT 129
Query: 119 YTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLL 178
+T+ F L C+ + +H + G+ +++F+ L+++Y ++ + A +
Sbjct: 130 HTFPFCLKACSLLPALSLAQTLHSQAFKFGFGADLFVCNTLIHVYSVNKH---LHHACQV 186
Query: 179 FDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGK-SRQA 237
F++ + VVS+N+L+ G++K GD D A ++FD+MP R+ VSW T+++G AQ+G A
Sbjct: 187 FNETSLKDVVSYNALIGGFIKVGDTDRARRLFDKMPIRDAVSWGTLLAGYAQSGDLCMDA 246
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
+ LFN M + V D +ALV+ALSACA++G+L+ GK IH Y+++N R P+ L+
Sbjct: 247 IQLFNRMLISTVRPDNIALVSALSACAQLGELEQGKSIHVYIKQN----RIPINAFLSTG 302
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------------- 343
L+ +YA CG IE A +F +N +W +++ G G +L
Sbjct: 303 LVDLYAKCGCIETAREIFESSPDKNLFTWNALLVGLGMHGRGHLSLHYFSRMIEAGIKPD 362
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
++FLG+L C H G V E R FF+ M + + ++HYGCM DL RAGL+ EA ++
Sbjct: 363 GVSFLGILVGCGHAGLVCEARNFFQEMEVVYRVPRELKHYGCMADLLGRAGLIREAMEMI 422
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKR 462
+ MPM + V G +L GCRIH N E+A + A+ ++A ++PE Y +++A++YA A R
Sbjct: 423 ERMPMGGDVFVWGGVLGGCRIHGNVEIAEKAAENVMA-LNPEDDGVY-SIMADIYANAGR 480
Query: 463 WQDVAAVRQKMIKMGVRKPPGQSWVQI-NGVLHDFVAGDST 502
W+DVA +R+ M V+K PG S VQ+ NGV H FVAG ++
Sbjct: 481 WEDVARIRRLMHSRQVKKNPGCSLVQLNNGVFHGFVAGSAS 521
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 176/500 (35%), Positives = 279/500 (55%), Gaps = 28/500 (5%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKET-EP 116
+++ Y G + A +FE E S WN +I G+ ++ + ++ + +M+ + EP
Sbjct: 235 MVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEP 294
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCAR 176
DE+T + +LS CA + + G+Q+H +L +G + I L++ Y SG V AR
Sbjct: 295 DEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGS---VETAR 351
Query: 177 LLFDD--MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
+ D + +V+S+ +LL+GYVK GD A ++FD M +R+V++WT MI G QNG++
Sbjct: 352 RIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQN 411
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
+A+ LF M R+ + L A LSACA + L GK IH + + VS+
Sbjct: 412 DEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSL----QEQSVSV 467
Query: 295 NNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAKQGYAQEALL--------- 344
+NA+I +YA G + A VF ++ R+ TV+WTSMI A+ G ++A++
Sbjct: 468 SNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVG 527
Query: 345 ------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEA 398
T++GV SAC+H GF+D+G++++E M GI P + HY CMVDL +RAGL+ EA
Sbjct: 528 VKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEA 587
Query: 399 FSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYA 458
+Q MP+ P+ V GSLL CR+ NA+LA A+KL++ IDP+ + Y AL ANVY+
Sbjct: 588 HEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLS-IDPDNSGAYSAL-ANVYS 645
Query: 459 AAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITM 518
A RW D A + + V+K G SW + +H F A D + Q I K E+
Sbjct: 646 ACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAICKKAAEMWE 705
Query: 519 QAMQEGYKPDISELFLGIEE 538
+ + G+ PD++ + +++
Sbjct: 706 EIKKAGFVPDLNSVLHDVDD 725
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 181/382 (47%), Gaps = 41/382 (10%)
Query: 48 FSQKN-YILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLY 106
++++N + LL+ Y SG L +A VF + W M+ G R+ +V +
Sbjct: 92 YARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTF 151
Query: 107 KQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMS 166
M+ + P ++ + +LS CA G +VH V+ G S V + +++ +Y
Sbjct: 152 LDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMY--- 208
Query: 167 GGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMI 225
G+CG AR +F+ M RS SWN+++ Y +G +D A +F+ M R++VSW +I
Sbjct: 209 -GKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAII 267
Query: 226 SGCAQNGKSRQALSLFNEMRRA-RVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFS 284
+G QNG AL F+ M A + D+ + + LSACA + LK+GK +HSY+
Sbjct: 268 AGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYI---LR 324
Query: 285 VGREPVLVSLNNALIHMYASCGEIEEAYGVFRK--MQRRNTVSWTSMITGFAKQGYAQEA 342
G P + NALI YA G +E A + K + N +S+T+++ G+ K G ++A
Sbjct: 325 TGM-PYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQA 383
Query: 343 LLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
R+ F+ MN I + M+ + + G DEA L
Sbjct: 384 --------------------REVFDVMNNRDVIA-----WTAMIVGYEQNGQNDEAMELF 418
Query: 403 QNMPM---KPNDAVLGSLLLGC 421
++M +PN L ++L C
Sbjct: 419 RSMIRSGPEPNSHTLAAVLSAC 440
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 139/294 (47%), Gaps = 40/294 (13%)
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGC---ARLLFDDMP--ARSVVSWN 191
G +H + +G + ++ NL++ Y +G G GC AR LFDD+P R+ +WN
Sbjct: 44 GRAIHAHAVKAGLLVSAYLCNNLLSYYARAG--VGRGCFHEARRLFDDIPYARRNAFTWN 101
Query: 192 SLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL 251
SLL Y K G + A +F +MP R+ VSWT M+ G + G+ A+ F +M +
Sbjct: 102 SLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAP 161
Query: 252 DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEA 311
Q L LS+CA +G+ +HS+V +G V + N++++MY CG+ E A
Sbjct: 162 SQFMLTNVLSSCAATEARGIGRKVHSFV---IKLGLSSC-VPVANSVLYMYGKCGDAETA 217
Query: 312 YGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQ 371
VF +M+ R+ SW +M++ + +H G +D FE M +
Sbjct: 218 RAVFERMKVRSESSWNAMVSLY--------------------THQGRMDLALSMFENMEE 257
Query: 372 NWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM----PMKPNDAVLGSLLLGC 421
I + ++ +++ GL D A M M+P++ + S+L C
Sbjct: 258 R-----SIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSAC 306
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 171/477 (35%), Positives = 260/477 (54%), Gaps = 28/477 (5%)
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARC----GLFREG 137
S + + +IR +RS P ++ LY ++ P +T LL A G
Sbjct: 36 SVELHDALIRALSRSARPHLALPLYAHLLRAGLLPTPHTLPSLLKSMALSPAVPGAAVLA 95
Query: 138 EQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGY 197
VH + G V + L+ ++ G G LL A ++N+L+ Y
Sbjct: 96 LTVHTHAVKLGLDRFVLVSNALIRVHAGFLGSLADGL--LLLRTAAAVDASTFNTLITAY 153
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
+ G + A +FDEMP RN VSW+ M++G Q G R+AL +F M+ V D LV
Sbjct: 154 ARAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLV 213
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
L+ACA+ G L+ GKW+H Y++ + + + AL+ MY+ CGE++ A VF +
Sbjct: 214 GVLAACAQHGALEQGKWVHGYLKAHGI----KINLFFGTALVDMYSKCGEVQLAMDVFER 269
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEALL---------------TFLGVLSACSHGGFVDEG 362
MQ +N ++WT+MI G A G EA++ F+GVL AC+H G VD+G
Sbjct: 270 MQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVDKG 329
Query: 363 RQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCR 422
R+ F+ M + +GIKP+IEHYGCMVDL +R G + EA ++Q MPM+P+ + G+L+ GCR
Sbjct: 330 RELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMAGCR 389
Query: 423 IHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPP 482
H N E A VA+ + ++P+++ Y+ L++N+YAA+ R +R M + GV K P
Sbjct: 390 FHKNVEFAEYVAKHWIL-LEPDKSGAYV-LLSNIYAASGRHASAREIRHLMREKGVDKTP 447
Query: 483 GQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEI-TMQAMQEGYKPDISELFLGIEE 538
G S V++NGV+H F+ GD ++ + I EI T ++EGY PD+ E+ L IEE
Sbjct: 448 GCSTVEVNGVIHQFIVGDLSHPRIKDILSKWYEIDTRIRLEEGYIPDMKEVLLDIEE 504
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 126/277 (45%), Gaps = 40/277 (14%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
L+ Y +G L +A +F++ + W+ M+ G+ ++ +++ ++ +M ++ PD
Sbjct: 149 LITAYARAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPD 208
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCAR 176
+ +L+ CA+ G +G+ VHG + A G N+F T L+++Y +CG V A
Sbjct: 209 DTVLVGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMY----SKCGEVQLAM 264
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
+F+ M ++V++W + MI G A +G+ +
Sbjct: 265 DVFERMQYKNVLAWTT-------------------------------MIKGLAMHGRGSE 293
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
A+ LF +M + + D +A + L AC G + G+ + + + + + +
Sbjct: 294 AVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPK---IEHYG 350
Query: 297 ALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITG 332
++ + A G + EA + +KM + + W +++ G
Sbjct: 351 CMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMAG 387
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 44/102 (43%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H + +G + L+ Y G + A VFE+ + + W MI+G A
Sbjct: 231 VHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTMIKGLAMHGR 290
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
++V L+ QM PD+ + +L C GL +G ++
Sbjct: 291 GSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVDKGREL 332
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 183/555 (32%), Positives = 300/555 (54%), Gaps = 57/555 (10%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
++ E P +P S K L ++ SLL+ + + Q H++I+ G ++ + L+A
Sbjct: 13 LVSREDPPQSPELSFK-LGEKECVSLLKKCSNMEEFKQSHARILKLGLFGDSFCASNLVA 71
Query: 61 FYVTS--GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDE 118
S G + A +F + + + +N M+RGH + E+++ YK+M ++ +PD
Sbjct: 72 TCALSDWGSMDYACSIFRQMDELGSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDN 131
Query: 119 YTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLL 178
+TY LL CAR EG QVH +L G ++VF++ +L+++Y GE GV CA +
Sbjct: 132 FTYPTLLKACARLPAVEEGMQVHAHILKLGLENDVFVQNSLISMY-GKCGEIGVCCA--V 188
Query: 179 FDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQAL 238
F+ M RSV SW++L+ + G ++ +M N W
Sbjct: 189 FEQMNERSVASWSALITAHASLGMWSDCLRLLGDMS--NEGYW----------------- 229
Query: 239 SLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNAL 298
RA ++ LV+ LSAC +G L LG+ +H ++ N S + V + +L
Sbjct: 230 -------RA----EESILVSVLSACTHLGALDLGRSVHGFLLRNVS----GLNVIVETSL 274
Query: 299 IHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------------- 343
I MY CG + + +F+KM ++N +S++ MI+G A GY +E L
Sbjct: 275 IEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDD 334
Query: 344 LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQ 403
+ ++GVL+ACSH G V EG Q F M GI+P I+HYGCMVDL RAG +DEA L++
Sbjct: 335 IVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIK 394
Query: 404 NMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRW 463
+MPM+PND + SLL ++HNN + A ++A K + ++D ++A+ Y+ L +N+YA A+RW
Sbjct: 395 SMPMEPNDVLWRSLLSASKVHNNLQ-AGEIAAKQLFKLDSQKASDYVVL-SNMYAQAQRW 452
Query: 464 QDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQE 523
+DVA R M G+ + PG S V++ +H FV+ D+ + Q+ +Y+ L ++ Q E
Sbjct: 453 EDVAKTRTNMFSKGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLKFE 512
Query: 524 GYKPDISELFLGIEE 538
GY PD +++ ++E
Sbjct: 513 GYSPDTTQVLCDVDE 527
>gi|449528479|ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 180/529 (34%), Positives = 294/529 (55%), Gaps = 27/529 (5%)
Query: 21 RQIF-SLLQIRNTTKTLFQIHSQIIINGF-SQKNYILAKLLAFYVTSGYLINAHKVFEKT 78
RQ F LLQ + QIH ++ G S++ Y+ L+ YV +G A ++F++
Sbjct: 65 RQTFLYLLQTTKFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEM 124
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE 138
+ + +N MI G A+ + L+ M EPD++T LL +C + G + G+
Sbjct: 125 SDRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGK 184
Query: 139 QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGY 197
VH ++ S SN+ + L+++Y+ +C + AR +FD + VSWN+++ GY
Sbjct: 185 SVHAQIEKSIGSSNLILYNALLDMYV----KCNELKLARKVFDGPMEKDTVSWNTIIAGY 240
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
K G+++ A +F+++P R++VSW ++ISG AQNG LF M V D+V +V
Sbjct: 241 AKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIV 300
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
+SA AE+G L G+WIH + + + +ALI MY CG IE A+ +F +
Sbjct: 301 NLISAVAEMGALDQGRWIHGLAVKMLT----KIEAFSGSALIDMYCKCGSIERAFVIFNQ 356
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEAL--------------LTFLGVLSACSHGGFVDEGR 363
+ ++ +WT+MITGFA G+ +AL +TF+ VL+ACSH G VDEG
Sbjct: 357 IPEKDVTTWTTMITGFAFHGFGNKALELFSVMQAETKPNDVTFVSVLAACSHSGLVDEGL 416
Query: 364 QFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRI 423
+ F M + + I+P +EHYGC+VDL R+G + +A +++ MPM+P+ ++ G++L CR+
Sbjct: 417 KIFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRM 476
Query: 424 HNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPG 483
H N ELA + +L+ +++PE+ GY+ L++NVYA RW ++R+ M GV+K G
Sbjct: 477 HRNMELAERALMELL-KLEPEKEGGYI-LLSNVYATCGRWSYSDSIREVMNSRGVKKIAG 534
Query: 484 QSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISEL 532
S V ++G++HDF A + + + I L +T + E P S L
Sbjct: 535 CSSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMRLEADVPSKSHL 583
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 183/428 (42%), Gaps = 100/428 (23%)
Query: 78 TENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
T P+ I+N MI G S EK+ +Y+ M+ T PD T+ +LL E
Sbjct: 27 TPYPNLYIFNTMILGFPFSN--EKAFTIYRSMLQNGTYPDRQTFLYLLQTTK---FVAEV 81
Query: 138 EQVHGRVLASGYCSN-VFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKG 196
+Q+H L G S ++R +L+ Y+ +G C CAR LFD+M R+VVS+N+++ G
Sbjct: 82 KQIHCHALVFGLLSKEEYLRNSLIKRYVDNG--C-FECARQLFDEMSDRNVVSYNTMILG 138
Query: 197 YVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVAL 256
+ K G+I G L LF++MR + D +
Sbjct: 139 FAKVGNILG-------------------------------ILELFHDMRSHGLEPDDFTM 167
Query: 257 VAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFR 316
+ L C ++G+ KLGK +H+ +E+ S+G ++ L NAL+ MY C E++ A VF
Sbjct: 168 LGLLLLCGQLGETKLGKSVHAQIEK--SIGSSNLI--LYNALLDMYVKCNELKLARKVFD 223
Query: 317 KMQRRNTVSWTSMITGFAK--------------------------QGYAQEA-------- 342
++TVSW ++I G+AK GYAQ
Sbjct: 224 GPMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCL 283
Query: 343 ------------LLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIK--PRIEHY--GCMV 386
+T + ++SA + G +D+GR +K +IE + ++
Sbjct: 284 FTRMFAENVKPDKVTIVNLISAVAEMGALDQGRWI-----HGLAVKMLTKIEAFSGSALI 338
Query: 387 DLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQA 446
D++ + G ++ AF + +P K + +++ G H A ++ + AE P
Sbjct: 339 DMYCKCGSIERAFVIFNQIPEK-DVTTWTTMITGFAFHGFGNKALELFSVMQAETKPNDV 397
Query: 447 AGYLALVA 454
L A
Sbjct: 398 TFVSVLAA 405
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 282/518 (54%), Gaps = 57/518 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H+ +I + Y+ +L+ Y L +A +V ++ + W MI G+++
Sbjct: 31 RVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRG 90
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++++L+ +M+ T P+E+T++ +L+ C F+ G Q+H V+ + + S++F+ +
Sbjct: 91 YASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGS 150
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
+L+++Y K G I A ++FD +P R+
Sbjct: 151 SLLDMY----------------------------------AKAGKICEARRVFDGLPERD 176
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VVS T +ISG AQ G +AL LF ++R + + V + L+A + + L G+ +HS
Sbjct: 177 VVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHS 236
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
+V + P V L N+LI MY+ CG + + +F M R +SW +M+ G++K G
Sbjct: 237 HVLR----AKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHG 292
Query: 338 YAQEAL----------------LTFLGVLSACSHGGFVDEGRQ-FFECMNQNWGIKPRIE 380
+EA+ +TFL VLS CSHGG D G + F+E +NQ G +P IE
Sbjct: 293 LGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIE 352
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HYGC+VDLF RAG ++EAF ++ MP +P A+ GSLL CR+H N + VA++L+ E
Sbjct: 353 HYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLL-E 411
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
I+ E A Y+ L +N+YA+A RW DV VR+ M + V K PG+SW++++ LH F A D
Sbjct: 412 IESENAGNYVIL-SNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASD 470
Query: 501 STYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++ + ++ + E++++ + GY P++S + +++
Sbjct: 471 RSHPRKEEVFAKVRELSIKIKEAGYVPELSCVLYDVDD 508
>gi|242069679|ref|XP_002450116.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
gi|241935959|gb|EES09104.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
Length = 597
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 177/516 (34%), Positives = 270/516 (52%), Gaps = 56/516 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVF-EKTENPSTAIWNQMIRGHARS 96
Q+H++ + ++L LL Y G L +A K F E + PST W +I + +
Sbjct: 96 QLHARSLKLPSHSNPHVLTSLLNLYARCGRLHDAQKAFDEMRQPPSTVSWTALITAYMDA 155
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
+++ + + PD +T +L+ CAR GE+V G NVF+
Sbjct: 156 GRGLEAIGVARSAFASGVRPDSFTAVRVLTACARVADLVTGEEVWTAAEKEGIAGNVFVA 215
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
T ++LY VK G++D A +FD+M ++
Sbjct: 216 TAAVDLY----------------------------------VKCGEMDKARGVFDKMKNK 241
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
+VV+W M+ G A NG R+AL LF M+ + D + ALSAC +G L LG+ +
Sbjct: 242 DVVAWGAMVGGYASNGHPREALELFFAMQVEGMRPDCYTVAGALSACTRLGALDLGRRVV 301
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
++ + +G PVL ALI MYA CG EA+ VF+KM+ R+ + W +MI G
Sbjct: 302 GMLQWDEVLG-NPVL---GTALIDMYAKCGSTGEAWMVFQKMRNRDIIVWNAMILGLGMT 357
Query: 337 GYAQEALL---------------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G+ + A TF+G+L +C+H G V +GR++F M Q + I+PRIEH
Sbjct: 358 GHEKIAFALVGQMKKSGMTLNDNTFIGLLCSCTHTGLVKDGRRYFRNMTQLYHIRPRIEH 417
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YG MVDL SRAGL+ EA L+Q+MPM+ N V G+LL GC+IH NA+LA V ++L+ ++
Sbjct: 418 YGIMVDLLSRAGLLQEAHQLIQDMPMEANAVVWGALLGGCKIHRNADLAEHVLKQLI-QL 476
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+P + Y+ L +N+Y+ + RW+D A +R +M GV K P SWV+++G +H+F GD
Sbjct: 477 EPWNSGNYVVL-SNIYSNSGRWEDAAKLRLEMKAKGVEKVPASSWVELDGKVHEFHVGDK 535
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIE 537
++ + IY L E+ M+ GYKP + IE
Sbjct: 536 SHPLSDQIYAKLDELGMEMKAMGYKPSTEVVMFDIE 571
>gi|449443225|ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 180/529 (34%), Positives = 294/529 (55%), Gaps = 27/529 (5%)
Query: 21 RQIF-SLLQIRNTTKTLFQIHSQIIINGF-SQKNYILAKLLAFYVTSGYLINAHKVFEKT 78
RQ F LLQ + QIH ++ G S++ Y+ L+ YV +G A ++F++
Sbjct: 130 RQTFLYLLQTTKFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEM 189
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE 138
+ + +N MI G A+ + L+ M EPD++T LL +C + G + G+
Sbjct: 190 SDRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGK 249
Query: 139 QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGY 197
VH ++ S SN+ + L+++Y+ +C + AR +FD + VSWN+++ GY
Sbjct: 250 SVHAQIEKSIGSSNLILYNALLDMYV----KCNELKLARKVFDGPMEKDTVSWNTIIAGY 305
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
K G+++ A +F+++P R++VSW ++ISG AQNG LF M V D+V +V
Sbjct: 306 AKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIV 365
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
+SA AE+G L G+WIH + + + +ALI MY CG IE A+ +F +
Sbjct: 366 NLISAVAEMGALDQGRWIHGLAVKMLT----KIEAFSGSALIDMYCKCGSIERAFVIFNQ 421
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEAL--------------LTFLGVLSACSHGGFVDEGR 363
+ ++ +WT+MITGFA G+ +AL +TF+ VL+ACSH G VDEG
Sbjct: 422 IPEKDVTTWTTMITGFAFHGFGNKALELFSVMQAETKPNDVTFVSVLAACSHSGLVDEGL 481
Query: 364 QFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRI 423
+ F M + + I+P +EHYGC+VDL R+G + +A +++ MPM+P+ ++ G++L CR+
Sbjct: 482 KIFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRM 541
Query: 424 HNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPG 483
H N ELA + +L+ +++PE+ GY+ L++NVYA RW ++R+ M GV+K G
Sbjct: 542 HRNMELAERALMELL-KLEPEKEGGYI-LLSNVYATCGRWSYSDSIREVMNSRGVKKIAG 599
Query: 484 QSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISEL 532
S V ++G++HDF A + + + I L +T + E P S L
Sbjct: 600 CSSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMRLEADVPSKSHL 648
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 123/483 (25%), Positives = 206/483 (42%), Gaps = 103/483 (21%)
Query: 26 LLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSG--YLINAHKVFEK-TENPS 82
LL+ N+ QI ++ N + + +++LL F S L A +F T P+
Sbjct: 37 LLEKCNSRTQFKQILGHMMRNNLVGQTFPMSRLLFFSAVSHPENLELAILLFNHFTPYPN 96
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHG 142
I+N MI G S EK+ +Y+ M+ T PD T+ +LL E +Q+H
Sbjct: 97 LYIFNTMILGFPFSN--EKAFTIYRSMLQNGTYPDRQTFLYLLQTTK---FVAEVKQIHC 151
Query: 143 RVLASGYCSN-VFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRG 201
L G S ++R +L+ Y+ +G C CAR LFD+M R+VVS+N+++ G+ K G
Sbjct: 152 HALVFGLLSKEEYLRNSLIKRYVDNG--C-FECARQLFDEMSDRNVVSYNTMILGFAKVG 208
Query: 202 DIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALS 261
+I G L LF++MR + D ++ L
Sbjct: 209 NILG-------------------------------ILELFHDMRSHGLEPDDFTMLGLLL 237
Query: 262 ACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR 321
C ++G+ KLGK +H+ +E+ S+G ++ L NAL+ MY C E++ A VF +
Sbjct: 238 LCGQLGETKLGKSVHAQIEK--SIGSSNLI--LYNALLDMYVKCNELKLARKVFDGPMEK 293
Query: 322 NTVSWTSMITGFAK--------------------------QGYAQEA------------- 342
+TVSW ++I G+AK GYAQ
Sbjct: 294 DTVSWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMF 353
Query: 343 -------LLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIK--PRIEHY--GCMVDLFSR 391
+T + ++SA + G +D+GR +K +IE + ++D++ +
Sbjct: 354 AENVKPDKVTIVNLISAVAEMGALDQGRWI-----HGLAVKMLTKIEAFSGSALIDMYCK 408
Query: 392 AGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLA 451
G ++ AF + +P K + +++ G H A ++ + AE P
Sbjct: 409 CGSIERAFVIFNQIPEK-DVTTWTTMITGFAFHGFGNKALELFSVMQAETKPNDVTFVSV 467
Query: 452 LVA 454
L A
Sbjct: 468 LAA 470
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 282/518 (54%), Gaps = 57/518 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H+ +I + Y+ +L+ Y L +A +V ++ + W MI G+++
Sbjct: 498 RVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRG 557
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++++L+ +M+ T P+E+T++ +L+ C F+ G Q+H V+ + + S++F+ +
Sbjct: 558 YASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGS 617
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
+L+++Y K G I A ++FD +P R+
Sbjct: 618 SLLDMY----------------------------------AKAGKICEARRVFDGLPERD 643
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VVS T +ISG AQ G +AL LF ++R + + V + L+A + + L G+ +HS
Sbjct: 644 VVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHS 703
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
+V + P V L N+LI MY+ CG + + +F M R +SW +M+ G++K G
Sbjct: 704 HVLR----AKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHG 759
Query: 338 YAQEAL----------------LTFLGVLSACSHGGFVDEGRQ-FFECMNQNWGIKPRIE 380
+EA+ +TFL VLS CSHGG D G + F+E +NQ G +P IE
Sbjct: 760 LGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIE 819
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HYGC+VDLF RAG ++EAF ++ MP +P A+ GSLL CR+H N + VA++L+ E
Sbjct: 820 HYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLL-E 878
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
I+ E A Y+ L +N+YA+A RW DV VR+ M + V K PG+SW++++ LH F A D
Sbjct: 879 IESENAGNYVIL-SNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASD 937
Query: 501 STYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++ + ++ + E++++ + GY P++S + +++
Sbjct: 938 RSHPRKEEVFAKVRELSIKIKEAGYVPELSCVLYDVDD 975
>gi|356513796|ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 595
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 188/581 (32%), Positives = 300/581 (51%), Gaps = 96/581 (16%)
Query: 23 IFSLLQIRNTTKTLFQIHSQIIINGFSQKNYI----LAKLLAFYVTSGYLINAHKVFEKT 78
+F+ L+ L Q+ SQ+I++G SQ + KL + VT A +F+
Sbjct: 10 LFAALESWKNLHELNQVLSQLIVSGLSQHPLFATSAIKKLCSHSVT---FPRATFLFDHL 66
Query: 79 ENPSTAIWNQMIRGHARS-ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+P N +IR +AR + P + Y +M+ + P+ YT+ L+ VC G FREG
Sbjct: 67 HHPDAFHCNTIIRAYARKPDFPAALRFYYCKMLARSVPPNHYTFPLLIKVCTDIGSFREG 126
Query: 138 EQVHGRVLASGYCSNVFIRTNLMNLYLMSG------------------------------ 167
+ H R++ G+ S++F R +L+ +Y + G
Sbjct: 127 LKGHARIVKFGFGSDLFARNSLIRMYSVFGRIGNARMVFDESCWLDLVSYNSMIDGYVKN 186
Query: 168 GECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISG 227
GE +G AR +F++MP R V+SWN L+ GYV GD+D A ++F+ +P R+ VSW MI G
Sbjct: 187 GE--IGAARKVFNEMPDRDVLSWNCLIAGYVGVGDLDAANELFETIPERDAVSWNCMIDG 244
Query: 228 CAQNGKSRQALSLFNEMR---------------RARVG-------------------LDQ 253
CA+ G A+ F+ M ARV ++
Sbjct: 245 CARVGNVSLAVKFFDRMPAAVRNVVSWNSVLALHARVKNYGECLMLFGKMVEGREAVPNE 304
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
LV+ L+ACA +G L +G W+HS++ N ++ + +L++ L+ MYA CG ++ A G
Sbjct: 305 ATLVSVLTACANLGKLSMGMWVHSFIRSN-NIKPDVLLLT---CLLTMYAKCGAMDLAKG 360
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGF 358
VF +M R+ VSW SMI G+ G +AL TF+ VLSAC+H G
Sbjct: 361 VFDEMPVRSVVSWNSMIMGYGLHGIGDKALELFLEMEKAGQQPNDATFISVLSACTHAGM 420
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLL 418
V EG +F+ M + + I+P++EHYGCMVDL +RAGL++ + L++ +P+K A+ G+LL
Sbjct: 421 VMEGWWYFDLMQRVYKIEPKVEHYGCMVDLLARAGLVENSEELIRMVPVKAGSAIWGALL 480
Query: 419 LGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
GC H ++EL VA++ + E++P+ Y+ L++N+YAA RW DV VR + + G+
Sbjct: 481 SGCSNHLDSELGEIVAKRFI-ELEPQDIGPYI-LLSNMYAAKGRWDDVEHVRLMIKEKGL 538
Query: 479 RKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
+K S V + +V +S Y++ ++Y L E+ Q
Sbjct: 539 QKEAASSLVHLEDFESKYVKNNSGYRK-KIMYSMLSELGTQ 578
>gi|224143723|ref|XP_002325053.1| predicted protein [Populus trichocarpa]
gi|222866487|gb|EEF03618.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 189/560 (33%), Positives = 303/560 (54%), Gaps = 69/560 (12%)
Query: 2 LVEEIIPANPATSSKALTTRQIFSLLQIRNTTKT---LFQIHS---QIIINGFSQKNYIL 55
+V +I + P + T LLQ N K L QIH+ + + S ++
Sbjct: 1 MVLGVIQSPPPQIVTSKPTNHYNLLLQHLNECKDMSQLKQIHALSLRSTLPNHSTTLFLY 60
Query: 56 AKLLAFYVTSGYLIN-AHKVFEKTENPSTAIWNQMIRGHARSET---PEKSVYLYKQMID 111
+++L F +S + +N A++VF++ +NP++ +WN +IR A+S++ +++ LY M+
Sbjct: 61 SRILHF--SSLHDLNYAYRVFDQVDNPNSFMWNILIRACAQSQSVHLKREAILLYNTMLQ 118
Query: 112 KETE-PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGEC 170
+ + PD +T+ F+L CA EG+Q H +L G+ S+V+I
Sbjct: 119 RSSPFPDNHTFPFVLKACAYLFALFEGKQAHAHLLKLGFQSDVYIN-------------- 164
Query: 171 GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQ 230
NSL+ Y G ++ A +FD+MP R++VSW MI
Sbjct: 165 --------------------NSLIHFYASCGSLESAKNVFDKMPQRSLVSWNAMIDAFVL 204
Query: 231 NGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEEN--FSVGRE 288
G+ AL LF + ++ D + + ++ACA + L LG W H+++ N SV R+
Sbjct: 205 FGEFETALQLFVQFQQQFFEPDGYTIQSVINACAGLCALSLGMWAHAFLLRNCGVSVARD 264
Query: 289 PVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----- 343
VLV NN+L+ MY CG ++ A +F MQ+ + SW SMI GFA G + AL
Sbjct: 265 HVLV--NNSLLDMYCKCGSLDIATQIFEGMQKHDVTSWNSMILGFAMHGKGELALECFER 322
Query: 344 -----------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRA 392
+TF+GVLSAC+H V+EGR++F+ M + I+P++EHYGC+VD+ +RA
Sbjct: 323 MIRISRFVPNSITFVGVLSACNHRYMVNEGRKYFDMMVNEYKIEPQLEHYGCLVDILARA 382
Query: 393 GLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHN-NAELASQVAQKLVAEIDPEQAAGYLA 451
GL+DEA LV +MPMKP+ + SLL C N + EL+ +A++++ E + ++G
Sbjct: 383 GLIDEALELVASMPMKPDVVIWRSLLDSCCKKNASVELSENIARQIL-ESEEADSSGVYV 441
Query: 452 LVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYK 511
L++ VYA+A RW DV VR+ M G+ K PG S ++++GV H+F AGD+++ Q IY+
Sbjct: 442 LLSRVYASASRWNDVGLVRKLMTNNGILKEPGCSLIEVDGVTHEFFAGDTSHPQTKEIYQ 501
Query: 512 TLGEITMQAMQEGYKPDISE 531
L + + GYKPD S+
Sbjct: 502 VLNVVEERIDSTGYKPDYSQ 521
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 167/496 (33%), Positives = 269/496 (54%), Gaps = 53/496 (10%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
L+ Y ++GY+ +A K+F++ WN +I G+A + ++++ L+K+M+ +PD
Sbjct: 175 LIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPD 234
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
E T +LS CA+ G QVH + G+ SN+ I L++LY
Sbjct: 235 ESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLY-------------- 280
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
+K G+++ A +F+ + +++V+SW T+I G ++A
Sbjct: 281 --------------------IKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEA 320
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
L LF EM R+ ++V +++ L ACA +G + +G+WIH Y+++ P SL +
Sbjct: 321 LLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPS--SLRTS 378
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------------- 343
LI MYA CG+IE A VF M R+ SW +MI GFA G A A
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPD 438
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
+TF+G+LSACSH G +D GR F M +++ I P++EHYGCM+DL +GL EA ++
Sbjct: 439 DITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI 498
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKR 462
+M M P+ + SLL C++H N EL AQ L+ +I+P+ + Y+ L++N+YA A R
Sbjct: 499 NSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLI-KIEPKNSGSYV-LLSNIYATAGR 556
Query: 463 WQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQ 522
W +VA R + G++K PG S ++I+ V+H+F+ GD + + IY L E+ + +
Sbjct: 557 WNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIYGMLEEMEVLLEE 616
Query: 523 EGYKPDISELFLGIEE 538
G+ PD SE+ +EE
Sbjct: 617 AGFVPDTSEVLQEMEE 632
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 149/442 (33%), Positives = 243/442 (54%), Gaps = 28/442 (6%)
Query: 24 FSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY---LINAHKVFEKTEN 80
SLL T ++L IH+++I G NY L+KL+ F V S + L A VF+ +
Sbjct: 6 LSLLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQE 65
Query: 81 PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
P+ IWN M RGHA S P ++YLY MI P+ YT+ FLL CA+ FREG+Q+
Sbjct: 66 PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQI 125
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKR 200
HG VL G ++++ T+L+ +Y+ +G AR +FD R VVS+ +L+KGY
Sbjct: 126 HGHVLKLGCDLDLYVHTSLIAMYVKNGRXED---ARKVFDQSSHRDVVSYTALIKGYASN 182
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
G I A K+FDE+P ++VVSW +ISG A+ G ++AL LF EM + V D+ +V L
Sbjct: 183 GYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVL 242
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
SACA+ ++LG+ +HS+++++ G +V NALI +Y CGE+E A G+F +
Sbjct: 243 SACAQSASIELGRQVHSWIDDH-GFGSNLKIV---NALIDLYIKCGEVETASGLFEGLSY 298
Query: 321 RNTVSWTSMITGFAKQGYAQEALLTF---------------LGVLSACSHGGFVDEGRQF 365
++ +SW ++I G+ +EALL F L +L AC+H G +D GR
Sbjct: 299 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWI 358
Query: 366 FECMNQNW-GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
+++ G+ ++D++++ G ++ A + +M + + + +++ G +H
Sbjct: 359 HVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSM-LNRSLSSWNAMIFGFAMH 417
Query: 425 NNAELASQVAQKLVAE-IDPEQ 445
A A + ++ + I+P+
Sbjct: 418 GRANPAFDIFSRMRKDGIEPDD 439
>gi|356529920|ref|XP_003533534.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g15300-like [Glycine max]
Length = 555
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 179/507 (35%), Positives = 274/507 (54%), Gaps = 62/507 (12%)
Query: 35 TLFQIHSQIIINGFSQKNYILAKLLAFYV--------TSGYLINAHKVFEKTENPSTAIW 86
TL QIH+ +I+NGF+ L KL+ T+ A ++F + P T +W
Sbjct: 16 TLRQIHALMIVNGFTSNVGFLRKLVLTTAMSMVGPAATTAVTQYAVQMFAQIPQPDTFMW 75
Query: 87 NQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLA 146
N IRG ++S P +V LY QM + +PD +T+ +L C + G VHGRV
Sbjct: 76 NTYIRGSSQSHDPVHAVALYAQMTHRSVKPDNFTFPLVLKACTKLFWVNTGSVVHGRVFR 135
Query: 147 SGYCSNVFIRTNLMNLYLMSG------------------------------GECGVGCAR 176
G+ SNV +R L+ + G G+ V AR
Sbjct: 136 LGFGSNVVVRNTLLVFHAKCGDLKVANDIFDDSDKGDVVAWSALIAGYAQRGDLSV--AR 193
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
LFD+MP R +VSWN ++ Y K G+++ A ++FDE P ++VVSW M+ G + +++
Sbjct: 194 KLFDEMPKRDLVSWNVMITAYTKHGEMECARRLFDEAPMKDVVSWNAMVGGYVLHNLNQE 253
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
AL LF+EM D+V +++ LSACA++GD G+ +H+ + E + G+ L L N
Sbjct: 254 ALELFDEMCEVGECPDEVTMLSLLSACADLGD--XGEKVHAKIME-LNKGKLSTL--LGN 308
Query: 297 ALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------- 343
AL+ MYA CG I + VF ++ ++ VSW S+I G A G+A+E+L
Sbjct: 309 ALVDMYAKCGNIGKGVCVFWLIRDKDMVSWNSVIGGLAFHGHAEESLGLFREMQRTKVCP 368
Query: 344 --LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
+TF+GVL+ACSH G VDEG ++F M + I+P I H GC+VD+ +RAGL+ EAF
Sbjct: 369 DEITFVGVLAACSHTGNVDEGNRYFYLMKNKYKIEPNIRHCGCVVDMLARAGLLKEAFDF 428
Query: 402 VQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAK 461
+ +M ++PN V SLL C++H + ELA + ++L+ + +Q+ Y+ L++NVYA+
Sbjct: 429 IASMKIEPNAIVWRSLLGACKVHGDVELAKRATEQLL-RMRVDQSGDYV-LLSNVYASHG 486
Query: 462 RWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
W VR+ M GV K G S+V+
Sbjct: 487 EWDGAENVRKLMDDNGVTKTRGSSFVE 513
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 172/516 (33%), Positives = 285/516 (55%), Gaps = 56/516 (10%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H Q++ YI LL Y G L +A +FE+ + + +W MI G+ ++
Sbjct: 101 LHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHC 160
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
P +++ LYK+M + PDE T + L+S CA G ++H IR
Sbjct: 161 PNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSH-----------IREM 209
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
M + CA V ++L+ Y K GD+ A ++FD++ ++V
Sbjct: 210 DMKI-----------CA------------VLGSALVNMYAKCGDLKTARQVFDKLSDKDV 246
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRR-ARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+W+ +I G +N +S +AL LF E+ + + ++V ++A +SACA++GDL+ G+W+H
Sbjct: 247 YAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHD 306
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y+ ++ VSLNN+LI M++ CG+I+ A +F M ++ +SW SM+ GFA G
Sbjct: 307 YITRT----QKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHG 362
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+EAL +TF+GVL+ACSH G V EG++ F + +G++ + EHY
Sbjct: 363 LGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHY 422
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
GCMVDL RAGL+ EA ++ MP++P+ A+ GS+L CR++NN EL + A+ L+ +++
Sbjct: 423 GCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLL-KLE 481
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P Y+ L++N+YA K W +V VR+ M + G++K PG S V I+ + H F+AGD +
Sbjct: 482 PTNDGVYI-LLSNIYAKRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCS 540
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ + + I L ++ + GY D SE+ L I++
Sbjct: 541 HPEIAEISIMLRQVREKLKLAGYVADTSEVLLNIDD 576
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 182/386 (47%), Gaps = 60/386 (15%)
Query: 43 IIINGFSQKNYILAKLLAFYVTSGYLI--NAHKVFEKTENPSTAIWNQMIRGHARSETPE 100
+++ GF L KL+A ++ G L A+ VF T WN M+R S P
Sbjct: 1 MVVTGFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPR 60
Query: 101 KSVYLYKQMIDKETE-PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
+++ Y +M+++ PD +T+ LL CA F+ G+ +HG+V+ S+++I T L
Sbjct: 61 RALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTL 120
Query: 160 MNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
+N+Y CG + AR LF+ M R+ V W S++ GY+K
Sbjct: 121 LNMY----AACGDLKSARFLFERMGHRNKVVWTSMISGYMK------------------- 157
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
N +AL L+ +M D+V + +SACAE+ DL +G +HS+
Sbjct: 158 ------------NHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSH 205
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ E + L +AL++MYA CG+++ A VF K+ ++ +W+++I G+ K
Sbjct: 206 IREM----DMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNR 261
Query: 339 AQEAL----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+ EAL +T L V+SAC+ G ++ GR + + + +
Sbjct: 262 STEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQK-GHSVSLN 320
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMK 408
++D+FS+ G +D A + +M K
Sbjct: 321 NSLIDMFSKCGDIDAAKRIFDSMSYK 346
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 175/510 (34%), Positives = 269/510 (52%), Gaps = 57/510 (11%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
HS ++ +G ++ L+ Y G L A +VF++ WN MI G++R
Sbjct: 149 HSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYA 208
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
+V L+ +M D EPDE T +L C G G + G V+ + N F+ + L
Sbjct: 209 GDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSAL 268
Query: 160 MNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVV 219
+ +Y G+CG D+ A ++FD M ++VV
Sbjct: 269 IGMY----GKCG------------------------------DLSSARRVFDRMVKKDVV 294
Query: 220 SWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV 279
+W MI+G AQNG S +A+ LF+ MR + V D++ LV LSACA IG L GKW+ +Y
Sbjct: 295 TWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALDFGKWLDTYA 354
Query: 280 EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYA 339
E + + VS ALI MYA CG +++A VF M ++N VSW +MI+ A G
Sbjct: 355 SERGL--QNDIYVS--TALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRP 410
Query: 340 QEAL-----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
QE+L ++F+GVLSAC H G VDEGRQ F+ M+ ++G+ P+IEH+
Sbjct: 411 QESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVPKIEHH 470
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
CMVDL +RAG + EA+ ++ MP KP++ VLG+LL C+ N +++ +V L+ E++
Sbjct: 471 SCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGACQKRRNVDVSERVMHMLL-EME 529
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P + Y+ + + ++A KRW D A +R M + GV K PG SW++I +H+F AGD
Sbjct: 530 PLNSGNYI-ISSKIFANMKRWDDSARMRVLMRQRGVTKTPGCSWIEIENQVHEFHAGDVL 588
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISEL 532
+ + + + + + + EGY P + L
Sbjct: 589 HFISQDMCQVINLLNEEMKVEGYGPKVDFL 618
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 233/461 (50%), Gaps = 67/461 (14%)
Query: 20 TRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTE 79
T ++ SLL+ +TK+L QIH+Q+IIN + N++L + ++ NA +F +
Sbjct: 31 TDKLLSLLKQCTSTKSLQQIHTQMIINAIHKPNFLLHR----FIDLKDFNNASLLFSQIP 86
Query: 80 NPSTAIWNQMIRGHARS-ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE 138
P+ +N MIRG + + ++ Y QM D P+ +TY F+ CA + G+
Sbjct: 87 YPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQ 146
Query: 139 QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGY 197
H VL SG C++ +R +L+ +Y CG +GCAR
Sbjct: 147 CAHSGVLKSGLCADGHVRHSLITMY----SRCGELGCAR--------------------- 181
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
++FDE+ +++VSW +MISG ++ G + A+ LF EMR A D++ LV
Sbjct: 182 ----------RVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLV 231
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVS-LNNALIHMYASCGEIEEAYGVFR 316
+ L AC ++GDL LG WI +V EN E L S + +ALI MY CG++ A VF
Sbjct: 232 SILGACGDLGDLGLGSWIEGFVVEN-----EMDLNSFVGSALIGMYGKCGDLSSARRVFD 286
Query: 317 KMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDE 361
+M +++ V+W +MITG+A+ G + EA+ +T +GVLSAC+ G +D
Sbjct: 287 RMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALDF 346
Query: 362 GRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGC 421
G+ + + G++ I ++D++++ G +D+A + ++MP K N+ +++
Sbjct: 347 GK-WLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQK-NEVSWNAMISAL 404
Query: 422 RIHNNAELASQVAQKLVAE---IDPEQAAGYLALVANVYAA 459
H + + + +++ E + P + L A V+A
Sbjct: 405 AFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAG 445
>gi|357113878|ref|XP_003558728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 532
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 179/518 (34%), Positives = 276/518 (53%), Gaps = 62/518 (11%)
Query: 21 RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLL--AFYVTSGYLINAHKVFEKT 78
R+ SL QI+ Q+H+ +++ GF L +LL + G + +A+ VF++
Sbjct: 16 RRCRSLRQIK-------QVHALMVLRGFLSDPSALRELLFASAVAVRGAIAHAYLVFDQI 68
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKET----EPDEYTYSFLLSVCARCGLF 134
P ++N +IRG A + P +V LY +M + + PD+ T+ F+L C G
Sbjct: 69 PRPDLFMYNTLIRGAAHTAAPRDAVSLYARMARRGSCGGVRPDKITFPFVLRACTAMGAG 128
Query: 135 REGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV---------------------G 173
G QVH V+ +G S+ F+R L+ ++ S GE GV G
Sbjct: 129 GTGAQVHAHVVKAGCESDAFVRNALIGMH-ASCGELGVASALFDGRAREDAVAWSAMITG 187
Query: 174 CARL--------LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMI 225
CAR LFD+ P + VSWN ++ Y KRG++ A +F+ +P R+VVSW MI
Sbjct: 188 CARRGDIVAARKLFDECPVKDHVSWNVMITAYAKRGEMAPARVLFNRIPERDVVSWNAMI 247
Query: 226 SGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSV 285
SG + G A+ LF +M+R D V +++ LSACA+ GD+ +G+ +HS + E F
Sbjct: 248 SGHVRCGSHVYAMELFEQMQRMGQKPDVVTMLSLLSACADSGDIDVGRRLHSSLSEMFL- 306
Query: 286 GREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-- 343
R V L NALI MYA CG ++ A VF M+ ++ +W S+I G A G+ E++
Sbjct: 307 -RTGFTVILGNALIDMYAKCGSMKSALQVFWVMRDKDVSTWNSIIGGLALHGHVLESIDV 365
Query: 344 -------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFS 390
+TF+ VL ACSHGG VD+GR++F M ++ I+P ++HYGCMVD+
Sbjct: 366 FKKMLKEKVRPDEITFVAVLIACSHGGMVDKGREYFNLMQHHYRIEPNVKHYGCMVDMLG 425
Query: 391 RAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYL 450
RAGL+ EAF + M ++PN + +LL CR+H ELA ++L+ + E +G
Sbjct: 426 RAGLLKEAFEFIDTMKVEPNSVIWRTLLGACRVHGEIELAEHANRQLLKARNDE--SGDY 483
Query: 451 ALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
L++N+YA+A W + +R+ M GV K G++ V
Sbjct: 484 VLLSNIYASAGEWSESEKMRKLMDDSGVNKQAGRTVVD 521
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/517 (32%), Positives = 277/517 (53%), Gaps = 58/517 (11%)
Query: 26 LLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI 85
LLQ K L Q+H+ +I++G+ ++L KLL +G + ++F NP + +
Sbjct: 18 LLQAGPRLKLLHQVHAHVIVSGYGCSRFLLTKLLNLACAAGSISYTRQIFLIVPNPDSFL 77
Query: 86 WNQMIRGHARSET-PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRV 144
+ +IR ++ S+Y Y +M+ P YT++ ++ CA R G +HG V
Sbjct: 78 FTSLIRSTSKFHNFSVYSLYFYTRMVLSNVAPSNYTFTSVIKSCADLVALRHGRIIHGHV 137
Query: 145 LASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDID 204
L +G+ S+V+++T LM+ Y G+CGV C
Sbjct: 138 LVNGFGSDVYVQTALMSFY----GKCGVLC------------------------------ 163
Query: 205 GAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACA 264
A K+FD+M R+VV+W +MISG QNG +++A+ LF+ M+ V + V+ LSACA
Sbjct: 164 NARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACA 223
Query: 265 EIGDLKLGKWIHSYVEENFSVGREPVL-VSLNNALIHMYASCGEIEEAYGVFRKMQRRNT 323
+G LG W+H Y +VG L V L +LI+MY CG + +A VF M+ RN
Sbjct: 224 HLGAFILGCWVHEY-----AVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNV 278
Query: 324 VSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFEC 368
V+WT+MI+G+ GY +A+ +TF+ VLSAC+H G V+EGR+ FE
Sbjct: 279 VAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPNSITFVAVLSACAHAGLVNEGRRVFES 338
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAE 428
M + + + P +EH+ C+VD+ RAGL+DEA++ ++ + +P A+ ++L C++H N
Sbjct: 339 MREEYRLVPEVEHHVCLVDMLGRAGLLDEAYNFIKEIHEEPAPAIWTAMLGACKMHKNFG 398
Query: 429 LASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
L +QVA+ +A +P A Y+ L +N+YA A R V VR MI+ ++K G S +
Sbjct: 399 LGAQVAEHRLAS-EPGNPAHYVIL-SNIYALAGRMDQVEMVRDNMIRKCLKKQVGYSTID 456
Query: 489 INGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGY 525
++ + F GD ++ + + IY L ++ + + GY
Sbjct: 457 LDRKTYLFSMGDKSHTETNEIYHYLDQLMRKCREAGY 493
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 126/249 (50%), Gaps = 14/249 (5%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
M++ + P+N +S + + +L R IH +++NGF Y+ L++
Sbjct: 102 MVLSNVAPSNYTFTSVIKSCADLVALRHGR-------IIHGHVLVNGFGSDVYVQTALMS 154
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
FY G L NA KVF+K + S WN MI G+ ++ ++++ L+ +M + EP+ T
Sbjct: 155 FYGKCGVLCNARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSAT 214
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFD 180
+ +LS CA G F G VH + +G NV + T+L+N+Y G V AR +FD
Sbjct: 215 FVSVLSACAHLGAFILGCWVHEYAVGNGLDLNVVLGTSLINMYTRCG---NVSKAREVFD 271
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR----NVVSWTTMISGCAQNGKSRQ 236
M R+VV+W +++ GY G A ++F EM N +++ ++S CA G +
Sbjct: 272 SMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPNSITFVAVLSACAHAGLVNE 331
Query: 237 ALSLFNEMR 245
+F MR
Sbjct: 332 GRRVFESMR 340
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 165/517 (31%), Positives = 278/517 (53%), Gaps = 55/517 (10%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
+HS +I GF ++ L+ Y +G+L +A KVF++ + W +I G+ S
Sbjct: 122 LSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIES 181
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
+++ L++ +++ PD +T +L C+R G G + G + SG NVF+
Sbjct: 182 GCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVA 241
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
T+L+++Y K G ++ A ++FD M +
Sbjct: 242 TSLVDMY----------------------------------AKCGSMEEARRVFDGMVEK 267
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
+VV W+ +I G A NG ++AL +F EM+R V D A+V SAC+ +G L+LG W
Sbjct: 268 DVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWAR 327
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
++ + PVL ALI YA CG + +A VF+ M+R++ V + ++I+G A
Sbjct: 328 GLMDGD-EFLSNPVL---GTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMC 383
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G+ A TF+G+L C+H G VD+G ++F M+ + + P IEH
Sbjct: 384 GHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEH 443
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YGCMVDL +RAGL+ EA L+++MPM+ N V G+LL GCR+H + +LA V ++L+ E+
Sbjct: 444 YGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLI-EL 502
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+P +G+ L++N+Y+A+ RW + +R + + G++K PG SWV+++GV+H+F+ GD+
Sbjct: 503 EPWN-SGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVGDT 561
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++ + IY+ L + + GY P + +EE
Sbjct: 562 SHPLSHKIYEKLESLFKDLREAGYNPTTEFVLFDVEE 598
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 183/387 (47%), Gaps = 55/387 (14%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q H ++ G Q Y++ LL + A VF +T +P+ ++N +IRG ++
Sbjct: 21 QCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSND 80
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARC-GLFREGEQVHGRVLASGYCSNVFIR 156
+V +Y M PD +T+ F+L C R F G +H V+ +G+ +VF++
Sbjct: 81 AFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVK 140
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
T L+ LY +G + AR +FD++P ++VVSW +++ GY++
Sbjct: 141 TGLVCLYSKNG---FLTDARKVFDEIPEKNVVSWTAIICGYIE----------------- 180
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
SGC +AL LF + + D LV L AC+ +GDL G+WI
Sbjct: 181 ---------SGCFG-----EALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWID 226
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
Y+ E+ SVG V + +L+ MYA CG +EEA VF M ++ V W+++I G+A
Sbjct: 227 GYMRESGSVGN----VFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASN 282
Query: 337 GYAQEALLTF---------------LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G +EAL F +GV SACS G ++ G M+ + + +
Sbjct: 283 GMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLG 342
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMK 408
++D +++ G + +A + + M K
Sbjct: 343 TA-LIDFYAKCGSVAQAKEVFKGMRRK 368
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 192/554 (34%), Positives = 291/554 (52%), Gaps = 70/554 (12%)
Query: 12 ATSSKALTTRQIFSLLQIRNTTKTLF---QIHSQIIINGFSQKNYILAKLLAFYVTS--- 65
A S R +LL++ +L QIH++ + G + +LAK L F++ +
Sbjct: 4 AIPSTRPALRHCVALLRLHLAAPSLAAAKQIHARALRAGVPTSHPLLAKHLLFHLAALRA 63
Query: 66 GYLINAHKVFEK--TENPSTAI-WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYS 122
L A V + P N ++R A S P ++ L+++ + PD +TY
Sbjct: 64 PPLRYAVAVLSRLLPHGPLDPFPLNTVLRIAAGSPRPRVALELHRRRL---ALPDTHTYP 120
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDM 182
L+ CAR REGE +H +G+ + VF++ +L++LY G CG+
Sbjct: 121 PLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLY----GACGL---------- 166
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP--HRNVVSWTTMISGCAQNGKSRQALSL 240
+ A K+FDEMP RN+VSW +M++ A NG+ + L++
Sbjct: 167 --------------------FESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTV 206
Query: 241 FNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIH 300
F EM D +V+ L+ACAE G L LG+ +H YVE+ V V +NALI
Sbjct: 207 FWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVENSHV----SNALID 262
Query: 301 MYASCGEIEEAYGVFRKMQR-RNTVSWTSMITGFAKQGYAQEAL---------------L 344
+YA CG + +A +F +M R VSWTS+I G A G+ +EAL +
Sbjct: 263 LYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEI 322
Query: 345 TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQN 404
T +GVL ACSH G VD+G ++F+ M +++GI PRIEH GCMVDL RAG ++EA+ +
Sbjct: 323 TMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIIT 382
Query: 405 MPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQ 464
MP++PN V +LL C +H EL ++LV E+DP + Y+ L++N+YAA W
Sbjct: 383 MPLEPNAVVWRTLLGSCAMHKKLELGKVAWERLV-ELDPGHSGDYV-LLSNLYAAVGMWA 440
Query: 465 DVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEG 524
DV +R+ M+K VRK PG S V++ +++FV GD ++ ++ IY+ L EI + +EG
Sbjct: 441 DVHVLRKTMVKDRVRKNPGHSLVELRNSVYEFVMGDRSHPESEQIYEMLAEIAERLRREG 500
Query: 525 YKPDISELFLGIEE 538
Y P S + IEE
Sbjct: 501 YIPRTSNVLADIEE 514
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 169/492 (34%), Positives = 270/492 (54%), Gaps = 22/492 (4%)
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
YV + L A + T WN MI G+A ++ ++++MI + + DE+T+
Sbjct: 233 YVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTF 292
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFD 180
+ ++SVCA G FR G+++H L + + + N + +CG V A+ +F+
Sbjct: 293 TSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFN 352
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSL 240
MP R +VSWN +L GYV +D A F+EMP +N++SW MISG AQ G + +AL
Sbjct: 353 KMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKF 412
Query: 241 FNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIH 300
FN M+ A A+ +C+ +G LK G+ +H+ V G E L S NALI
Sbjct: 413 FNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQV---VRYGYESSL-SAGNALIT 468
Query: 301 MYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LT 345
MYA CG ++ A+ +F M + +SW +MI + G +A+ ++
Sbjct: 469 MYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRIS 528
Query: 346 FLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
FL V+SACSH G V EGR++F+ M+ +G+ P EHY ++DL RAG EA ++++M
Sbjct: 529 FLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESM 588
Query: 406 PMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQD 465
P +P + +LL GCRIH N +L + A++L E+ P+ Y+ L++N+YA A +W D
Sbjct: 589 PFEPGAPIWEALLAGCRIHGNIDLGIEAAERLF-ELKPQHDGTYV-LLSNMYAVAGQWND 646
Query: 466 VAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGY 525
+A VR+ M GV+K PG SW+++ +H F+ GD+ + + IY L ++ ++ + GY
Sbjct: 647 MAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDANHPEVRQIYNYLEQLVLEMRKIGY 706
Query: 526 KPDISELFLGIE 537
PD + +E
Sbjct: 707 VPDTKCVLHDVE 718
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 200/461 (43%), Gaps = 101/461 (21%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPS---------------- 82
+H+ +I +GF + +IL +L+ Y S L A +F++ P
Sbjct: 35 VHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGD 94
Query: 83 -----------------TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
+ +N MI ++ + ++ L+ M PD YT++ +L
Sbjct: 95 LKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVL 154
Query: 126 SVCARCGLFREGE----QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG---------- 171
A L E E Q+H V+ SG F+ T+++N + S +C
Sbjct: 155 GALA---LVAEKEKHCQQLHCAVVKSG---TGFV-TSVLNALISSYVKCAASPSAQSSSL 207
Query: 172 VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQN 231
+ AR LFD+MP R +SW +++ GYVK D+D A + + + V+W MISG A
Sbjct: 208 MAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHR 267
Query: 232 GKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL 291
G +A +F +M +++ LD+ + +S CA G +LGK +H+Y + + V
Sbjct: 268 GLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVA 327
Query: 292 VSLNNALIHMYASCGEIEEAYGVFRKMQRR------------------------------ 321
+ +NNALI Y CG+++ A +F KM R
Sbjct: 328 MPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPE 387
Query: 322 -NTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQF 365
N +SW MI+G A+ G+A+EAL F G + +CS G + GRQ
Sbjct: 388 KNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQL 447
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP 406
+ + +G + + ++ +++R G++D A L NMP
Sbjct: 448 HAQVVR-YGYESSLSAGNALITMYARCGVVDAAHCLFINMP 487
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 133/313 (42%), Gaps = 51/313 (16%)
Query: 114 TEPDEYT-----YSFLLSVCARCGL--FREGEQVHGRVLASGYCSNVFIRTNLMNLYLMS 166
T PD Y LL +C + VH ++ASG+ I L+++Y S
Sbjct: 2 TTPDSIRTAANRYGSLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKS 61
Query: 167 GGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP--HRNVVSWTTM 224
+ AR LFD++P +V+ +L+ Y GD+ + KIF + P R+ V + M
Sbjct: 62 SK---LNYARYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAM 118
Query: 225 ISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDL-KLGKWIHSYVEENF 283
I+ + N A+ LF +M+R D + L A A + + K + +H V ++
Sbjct: 119 ITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSG 178
Query: 284 SVGREPVLVSLNNALIHMYASCGE---------IEEAYGVFRKMQRRNTVSWTSMITGFA 334
+ + S+ NALI Y C + EA +F +M R+ +SWT++ITG+
Sbjct: 179 T----GFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYV 234
Query: 335 KQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGL 394
K +D ++F ++ G+ + M+ ++ GL
Sbjct: 235 KNND--------------------LDAAKEFLNGTSKKLGVA-----WNAMISGYAHRGL 269
Query: 395 MDEAFSLVQNMPM 407
EAF + + M M
Sbjct: 270 YLEAFEMFRKMIM 282
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 79/186 (42%), Gaps = 9/186 (4%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H+Q++ G+ L+ Y G + AH +F WN MI +
Sbjct: 446 QLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHG 505
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVL-ASGYCSNVFIR 156
+++ L+++M+ + PD ++ ++S C+ GL +EG + + G +
Sbjct: 506 QGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHY 565
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVS-WNSLLKGYVKRGDID----GAWKIFD 211
+++L +G A+ + + MP W +LL G G+ID A ++F+
Sbjct: 566 ARIIDLLCRAG---KFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFE 622
Query: 212 EMPHRN 217
P +
Sbjct: 623 LKPQHD 628
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 184/541 (34%), Positives = 292/541 (53%), Gaps = 59/541 (10%)
Query: 17 ALTTRQIFSLLQIRNTTKT-LFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHK 73
+ R+ SL+Q+ ++++ L QIH+ I +G +N K L F + S + A +
Sbjct: 31 SFILRKCISLVQLCGSSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQ 90
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQM-IDKETEPDEYTYSFLLSVCARCG 132
+F + + P+ WN MIRG A SE P +V L+ QM PD +T+ FL A+
Sbjct: 91 IFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLM 150
Query: 133 LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNS 192
GE +H V+ +G+ S F++ +L+++Y SV+
Sbjct: 151 DVSLGEGIHSVVVRNGFDSLRFVQNSLVHMY----------------------SVL---- 184
Query: 193 LLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLD 252
G + A+++F+ M +R+ V+W ++I+G A NG +AL+L+ EM V D
Sbjct: 185 --------GSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPD 236
Query: 253 QVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAY 312
+V+ LSAC E+G L LG+ +H Y+ + V + +NAL+ +Y+ CG +A
Sbjct: 237 GFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHA----SNALLDLYSKCGNFRDAQ 292
Query: 313 GVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGG 357
VF +M+ R+ VSWTS+I G A G EAL +TF+GVL ACSH G
Sbjct: 293 KVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCG 352
Query: 358 FVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSL 417
+DEG +F M + +GI PRIEH+GCMVDL RAG + +A+ ++NMP+ PN + +L
Sbjct: 353 MLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTL 412
Query: 418 LLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMG 477
L C IH + EL +VA+ + ++ ++ +G L++N+YA+ +RW DV VR+ M+ G
Sbjct: 413 LGACTIHGHLELG-EVARAEIQRLE-QRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKG 470
Query: 478 VRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIE 537
V+K PG S V++ +++F+ GD ++ Q+ Y L +IT EGY P + IE
Sbjct: 471 VKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLADIE 530
Query: 538 E 538
E
Sbjct: 531 E 531
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 168/515 (32%), Positives = 280/515 (54%), Gaps = 55/515 (10%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
I + + G ++L+ L+ Y + + A +F+ E +WN +I + ++
Sbjct: 141 IQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGN 200
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
+ V ++K M++ DE T +++ C R G + G+ V V G N N
Sbjct: 201 WMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRN----RN 256
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
LM +L+ Y K G++ A ++FD M R+V
Sbjct: 257 LMT------------------------------ALIDMYAKCGELGKARRLFDGMQSRDV 286
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
V+W+ MISG Q + R+AL+LF+EM+ A V + V +V+ LSACA +G L+ GKW+HSY
Sbjct: 287 VAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSY 346
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ R + + L AL+ YA CG I++A F M +N+ +WT++I G A G
Sbjct: 347 IRRK----RLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGR 402
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
+EAL +TF+GVL ACSH V+EGR+ F+ M Q++GIKPR EHYG
Sbjct: 403 GREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYG 462
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
C+VDL RAGL+DEA+ ++ MP++PN + +LL C +H N E+ + +++V+ ++P
Sbjct: 463 CVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVS-LNP 521
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
+ Y+ L++N+YA+ +W++ A +R++M G+ K PG S ++++GV+ +F A DS +
Sbjct: 522 SHSGDYI-LLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIELDGVVVEFFAEDSDH 580
Query: 504 KQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
Q IY+ + E+ + GY P+ +++ L ++E
Sbjct: 581 PQLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVDE 615
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 52/122 (42%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEK 77
+T + S + +T +HS I S + L+ FY G + +A + FE
Sbjct: 322 VTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFES 381
Query: 78 TENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
++ W +I+G A + +++ L+ M EP + T+ +L C+ L EG
Sbjct: 382 MPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEG 441
Query: 138 EQ 139
+
Sbjct: 442 RR 443
>gi|225451356|ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Vitis vinifera]
Length = 654
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 174/514 (33%), Positives = 284/514 (55%), Gaps = 28/514 (5%)
Query: 10 NPATSSKALTTRQIF-SLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYL 68
N SS R F LLQ + QIH II G Y+ L+ Y+ + +
Sbjct: 119 NSLLSSCIYPNRSTFLFLLQASKFLSQVMQIHCHAIITGSFYYGYLQNTLMKIYLENEKM 178
Query: 69 INAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVC 128
A++VF++ P +N MI G+A+ +++ +M+ +PDE+T LL C
Sbjct: 179 GLAYQVFQQMAAPDAVSFNIMIFGYAKKGHNIEALKFLHEMVGLGLKPDEFTMLGLLICC 238
Query: 129 ARCGLFREGEQVHGRVLASGYC--SNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPAR 185
R G + G+ VH + G SN+ + L+++Y+ +C + A+ +F+ + +
Sbjct: 239 GRLGDAQLGKSVHAWIERRGLIKSSNLILNNALLDMYV----KCKELRIAQSIFNVIVRK 294
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
+SWN+++ GY K G+++ A F++MP R++VSW ++I+G AQ G LF M
Sbjct: 295 DTISWNTMIAGYAKVGNLEIAHNFFEDMPCRDLVSWNSIIAGYAQKGDCLMVQRLFENMV 354
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC 305
+ D V ++ +SA AEIG L G+WIH +V + + L +A I MY C
Sbjct: 355 AENIWPDFVTIINLVSAAAEIGALHHGRWIHGWVVRM----QMKIDAFLGSAFIDMYWKC 410
Query: 306 GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------------LTFLGVLS 351
G I+ A VFR++ ++ WT+MITGFA GY +AL +TF+ VL+
Sbjct: 411 GSIKRACMVFREVTEKDVTVWTTMITGFAFHGYGSKALQLFYEMQEYVMPNQVTFVAVLT 470
Query: 352 ACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPND 411
ACSH GFV +G + F M + +GI+P +EHYGC+VDL R+G E +++ MPMKP+
Sbjct: 471 ACSHSGFVSQGLRIFNSMKERYGIEPGVEHYGCLVDLLGRSGRFSEVKDVIEMMPMKPSR 530
Query: 412 AVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQ 471
++ G++L CR + N E+A ++A K + +++PE+ GY+ L++N+YA + RW+ +R+
Sbjct: 531 SIWGAVLSACRAYGNIEIA-EIAGKELLKLEPEKEGGYV-LLSNIYATSGRWKHSDKIRE 588
Query: 472 KMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQ 505
M GV+K G S V ++G++H+FVA D + +
Sbjct: 589 IMESRGVKKTAGCSSVVVDGIIHEFVAADKRHPR 622
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 114/258 (44%), Gaps = 51/258 (19%)
Query: 95 RSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARC---------------GLFREGEQ 139
R TP ++Y+Y MI + +++F S+ + C + Q
Sbjct: 89 RHHTPHPNLYIYNTMISALSLSLNQSFAFYNSLLSSCIYPNRSTFLFLLQASKFLSQVMQ 148
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVK 199
+H + +G +++ LM +YL + +G A +F M A VS+N ++ GY K
Sbjct: 149 IHCHAIITGSFYYGYLQNTLMKIYLENE---KMGLAYQVFQQMAAPDAVSFNIMIFGYAK 205
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
+G N+ +AL +EM + D+ ++
Sbjct: 206 KG--------------HNI-----------------EALKFLHEMVGLGLKPDEFTMLGL 234
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
L C +GD +LGK +H+++E + ++ LNNAL+ MY C E+ A +F +
Sbjct: 235 LICCGRLGDAQLGKSVHAWIERRGLIKSSNLI--LNNALLDMYVKCKELRIAQSIFNVIV 292
Query: 320 RRNTVSWTSMITGFAKQG 337
R++T+SW +MI G+AK G
Sbjct: 293 RKDTISWNTMIAGYAKVG 310
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 160/379 (42%), Positives = 230/379 (60%), Gaps = 21/379 (5%)
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
A+ LF + +R++V +++ GY + G ++ A IFD+M +++V W+ MISG A++ K
Sbjct: 2 AQKLFTKISSRNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKP 61
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
++AL+LF+EM+ + DQV +++ +SACA +G L KWIH YV++N G PV
Sbjct: 62 QEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPV---- 117
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------- 343
NNALI MYA CG + A GVF KMQ RN +SWTSMI FA G A AL
Sbjct: 118 NNALIDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENI 177
Query: 344 ----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAF 399
+TF+GVL ACSH G V+EGR+ F M I P+ EHYGCMVDLF RA L+ +A
Sbjct: 178 KPNGVTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDAL 237
Query: 400 SLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAA 459
LV+ MP+ PN + GSL+ C+IH EL + A K V E++P+ G L ++N+YA
Sbjct: 238 ELVETMPLAPNVVIWGSLMAACQIHGENELG-EFAAKQVLELEPDH-DGALVQLSNIYAK 295
Query: 460 AKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
+RWQDV +R M + G+ K G S +++N +++FV D +KQA IY+ L E+ +
Sbjct: 296 DRRWQDVGELRNLMKQRGISKERGCSRIELNNQVYEFVMADKKHKQADKIYEKLDEVVKE 355
Query: 520 AMQEGYKPDISELFLGIEE 538
GY P+ + + +EE
Sbjct: 356 LKLVGYTPNTRSVLVDVEE 374
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 107/210 (50%), Gaps = 10/210 (4%)
Query: 41 SQIIINGFSQKNYI-LAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
+Q + S +N + L +++ Y G + +A +F++ E W+ MI G+A S+ P
Sbjct: 2 AQKLFTKISSRNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKP 61
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
++++ L+ +M +PD+ T ++S CAR G+ + +H V +G + + L
Sbjct: 62 QEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNAL 121
Query: 160 MNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
+++Y +CG +G AR +F+ M +R+V+SW S++ + GD A K F +M N+
Sbjct: 122 IDMY----AKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENI 177
Query: 219 ----VSWTTMISGCAQNGKSRQALSLFNEM 244
V++ ++ C+ G + F M
Sbjct: 178 KPNGVTFVGVLYACSHAGLVEEGRRTFASM 207
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 66/167 (39%), Gaps = 23/167 (13%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
IH + NG + L+ Y G L A VFEK ++ + W MI A
Sbjct: 102 IHMYVDKNGLGGALPVNNALIDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGD 161
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLAS----------G 148
++ + QM D+ +P+ T+ +L C+ GL EG + + G
Sbjct: 162 ASNALKFFYQMKDENIKPNGVTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHYG 221
Query: 149 YCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMP-ARSVVSWNSLL 194
++F R NL+ L L + MP A +VV W SL+
Sbjct: 222 CMVDLFGRANLLRDALE------------LVETMPLAPNVVIWGSLM 256
>gi|15242278|ref|NP_197038.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180838|sp|Q9LXE8.1|PP386_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g15340, mitochondrial; Flags: Precursor
gi|7671503|emb|CAB89344.1| putative protein [Arabidopsis thaliana]
gi|332004768|gb|AED92151.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 176/518 (33%), Positives = 287/518 (55%), Gaps = 30/518 (5%)
Query: 38 QIHSQIIINGFSQ--KNYILAKLLAFYVTSGYLINAHKVFEKT--ENPSTAIWNQMIRGH 93
++H+ + +G + ++Y+ L FY +SG ++ A K+F++ W ++
Sbjct: 27 ELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSF 86
Query: 94 ARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNV 153
+R S+ L+ +M K E D+ + L VCA+ +Q HG + G ++V
Sbjct: 87 SRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSV 146
Query: 154 FIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDE 212
+ LM++Y G+CG V + +F+++ +SVVSW +L VK ++ ++F E
Sbjct: 147 KVCNALMDMY----GKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHE 202
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR-RARVGLDQVALVAALSACAEIGDLKL 271
MP RN V+WT M++G G +R+ L L EM R GL+ V L + LSACA+ G+L +
Sbjct: 203 MPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVV 262
Query: 272 GKWIHSY-VEENFSVGREPVL--VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTS 328
G+W+H Y +++ +G E V + AL+ MYA CG I+ + VFR M++RN V+W +
Sbjct: 263 GRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNA 322
Query: 329 MITGFAKQGYAQEAL--------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWG 374
+ +G A G + + LTF VLSACSH G VDEG + F + + +G
Sbjct: 323 LFSGLAMHGKGRMVIDMFPQMIREVKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYG 381
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVA 434
++P+++HY CMVDL RAGL++EA L++ MP+ PN+ VLGSLL C +H E+A ++
Sbjct: 382 LEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIK 441
Query: 435 QKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLH 494
++L+ ++ P Y L++N+Y A R +R + K G+RK PG S + +N +H
Sbjct: 442 RELI-QMSPGNTE-YQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVH 499
Query: 495 DFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISEL 532
F +GD ++ + IY L E+ + GY PD+S L
Sbjct: 500 RFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGL 537
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 151/380 (39%), Gaps = 96/380 (25%)
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDM 182
LL CA R G+++H + SG
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGL-------------------------------KK 39
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP--HRNVVSWTTMISGCAQNGKSRQALSL 240
RS +S N+L + Y G++ A K+FDE+P ++ V WTT++S ++ G ++ L
Sbjct: 40 APRSYLS-NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKL 98
Query: 241 FNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN--NAL 298
F EMRR RV +D V++V CA++ DL + H + VL S+ NAL
Sbjct: 99 FVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAV------KMGVLTSVKVCNAL 152
Query: 299 IHMYASCG----------EIEE---------------------AYGVFRKMQRRNTVSWT 327
+ MY CG E+EE VF +M RN V+WT
Sbjct: 153 MDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWT 212
Query: 328 SMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFF----- 366
M+ G+ G+ +E L +T +LSAC+ G + GR
Sbjct: 213 VMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALK 272
Query: 367 -ECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHN 425
E M + +VD++++ G +D + ++ + M K N +L G +H
Sbjct: 273 KEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLM-RKRNVVTWNALFSGLAMHG 331
Query: 426 NAELASQVAQKLVAEIDPEQ 445
+ + +++ E+ P+
Sbjct: 332 KGRMVIDMFPQMIREVKPDD 351
>gi|356513527|ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Glycine max]
Length = 579
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 181/515 (35%), Positives = 276/515 (53%), Gaps = 60/515 (11%)
Query: 36 LFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINA---HKVFEKTENPSTAIWNQMIRG 92
L QIH+ II Q + + L+ SG L +A + F + +P + +N MIR
Sbjct: 19 LLQIHAHIIRTTLIQYPTVSLQFLSRIALSGPLQDASYSQRFFGQLSHPLVSHYNTMIRA 78
Query: 93 HARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSN 152
+ S++P+K + LY+ M + D + SF + C R G QVH + G+ +
Sbjct: 79 CSMSDSPQKGLLLYRDMRRRGIAADPLSSSFAVKSCIRFLYLPGGVQVHCNIFKDGHQWD 138
Query: 153 VFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDE 212
+ T +M+LY + C R GD A K+FDE
Sbjct: 139 TLLLTAVMDLYSL--------CQR-----------------------GGD---ACKVFDE 164
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRA--RVGLDQVALVAALSACAEIGDLK 270
MPHR+ V+W MIS C +N ++R ALSLF+ M+ + + D V + L ACA + L+
Sbjct: 165 MPHRDTVAWNVMISCCIRNNRTRDALSLFDVMQGSSYKCEPDDVTCLLLLQACAHLNALE 224
Query: 271 LGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMI 330
G+ IH Y+ E G L +L N+LI MY+ CG +++AY VF+ M +N VSW++MI
Sbjct: 225 FGERIHGYIMER---GYRDAL-NLCNSLISMYSRCGCLDKAYEVFKGMGNKNVVSWSAMI 280
Query: 331 TGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGI 375
+G A GY +EA+ TF GVLSACS+ G VDEG FF M++ +G+
Sbjct: 281 SGLAMNGYGREAIEAFEEMLRIGVLPDDQTFTGVLSACSYSGMVDEGMSFFHRMSREFGV 340
Query: 376 KPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQ 435
P + HYGCMVDL RAGL+D+A+ L+ +M +KP+ + +LL CRIH + L +V
Sbjct: 341 TPNVHHYGCMVDLLGRAGLLDKAYQLIMSMVVKPDSTMWRTLLGACRIHGHVTLGERVIG 400
Query: 436 KLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHD 495
L+ E+ ++A Y+ L+ N+Y++A W+ VA VR+ M ++ PG S +++ G +H+
Sbjct: 401 HLI-ELKAQEAGDYV-LLLNIYSSAGHWEKVAEVRKLMKNKSIQTTPGCSTIELKGAVHE 458
Query: 496 FVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
FV D ++ + IY+TL EI Q GY ++S
Sbjct: 459 FVVDDVSHSRNREIYETLDEINHQLRIAGYVVELS 493
>gi|297824259|ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325851|gb|EFH56271.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 542
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 183/527 (34%), Positives = 286/527 (54%), Gaps = 30/527 (5%)
Query: 7 IPANPATSSKALTTRQIFSLLQIR-NTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS 65
+PA P SS ++ L+ R +T + L QIH+ +I G +++LAF S
Sbjct: 13 VPAIP--SSGFVSGNTCLRLIDTRCSTMRELKQIHANLIKTGLISDTVAASRVLAFCCAS 70
Query: 66 GYLIN-AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMI--DKETEPDEYTYS 122
N A+ VF + + + +WN +IRG +RS PE ++ ++ M+ +P TY
Sbjct: 71 PSDRNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYP 130
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDM 182
+ A GL R+G Q+HGRV+ G + FIR ++++Y+ G C V RL F M
Sbjct: 131 SVFKAYASLGLARDGRQLHGRVIKEGLEDDSFIRNTMLHMYVTCG--CLVEAWRL-FVGM 187
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
VV+WNS++ G K G ID A K+FDEMP RN VSW +MISG +NG+ + AL +F
Sbjct: 188 MGFDVVAWNSIIMGLAKCGLIDQAQKLFDEMPQRNGVSWNSMISGFVRNGRFKDALEMFR 247
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMY 302
EM+ V D +V+ L+ACA +G + G+WIH Y+ N R + + ALI MY
Sbjct: 248 EMQERDVKPDGFTMVSLLNACAYLGASEQGRWIHKYIVRN----RFELNSIVITALIDMY 303
Query: 303 ASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFL 347
CG EE VF + W SMI G A G + A+ ++F+
Sbjct: 304 CKCGCFEEGLKVFECAPTKQLSCWNSMILGLANNGCEERAMDLFLELERTGLEPDSVSFI 363
Query: 348 GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM 407
GVL+AC+H G V + +FF M + + I+P I+HY CMV++ AGL+DEA +L++ MP+
Sbjct: 364 GVLTACAHSGEVHKAGEFFRLMREKYMIEPSIKHYTCMVNVLGGAGLLDEAEALIKKMPV 423
Query: 408 KPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVA 467
+ + + SLL CR + N E+A + A L +DP++ GY+ L++N YA+ +++
Sbjct: 424 EGDTIIWSSLLAACRKNGNVEMAKRAANCL-KNLDPDETCGYV-LMSNAYASYGLFEEAV 481
Query: 468 AVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLG 514
R M + + K G S ++++ +H+FV+ + +++ IY LG
Sbjct: 482 EQRLLMKERQMEKEVGCSSIEVDFEVHEFVSCGKKHPKSTEIYSLLG 528
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 154/373 (41%), Gaps = 75/373 (20%)
Query: 5 EIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVT 64
+++ ++P+ + LT +F + Q+H ++I G ++I +L YVT
Sbjct: 114 DMLCSSPSVKPQRLTYPSVFKAYASLGLARDGRQLHGRVIKEGLEDDSFIRNTMLHMYVT 173
Query: 65 SGYLI-------------------------------NAHKVFEKTENPSTAIWNQMIRGH 93
G L+ A K+F++ + WN MI G
Sbjct: 174 CGCLVEAWRLFVGMMGFDVVAWNSIIMGLAKCGLIDQAQKLFDEMPQRNGVSWNSMISGF 233
Query: 94 ARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNV 153
R+ + ++ ++++M +++ +PD +T LL+ CA G +G +H ++ + + N
Sbjct: 234 VRNGRFKDALEMFREMQERDVKPDGFTMVSLLNACAYLGASEQGRWIHKYIVRNRFELNS 293
Query: 154 FIRTNLMNLYLMSGGECGVGC---ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIF 210
+ T L+++Y C GC +F+ P + + WNS
Sbjct: 294 IVITALIDMY------CKCGCFEEGLKVFECAPTKQLSCWNS------------------ 329
Query: 211 DEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLK 270
MI G A NG +A+ LF E+ R + D V+ + L+ACA G++
Sbjct: 330 -------------MILGLANNGCEERAMDLFLELERTGLEPDSVSFIGVLTACAHSGEVH 376
Query: 271 LGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSM 329
+ E + + EP + ++++ G ++EA + +KM +T+ W+S+
Sbjct: 377 KAGEFFRLMREKYMI--EPS-IKHYTCMVNVLGGAGLLDEAEALIKKMPVEGDTIIWSSL 433
Query: 330 ITGFAKQGYAQEA 342
+ K G + A
Sbjct: 434 LAACRKNGNVEMA 446
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 172/536 (32%), Positives = 287/536 (53%), Gaps = 51/536 (9%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++ ++ GF + + +L ++ G + A + FE+ E +WN M+ G+
Sbjct: 132 DVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKG 191
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYC------- 150
+K++ ++++M+ + +P+ T + +S C L R G ++HG YC
Sbjct: 192 EFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHG------YCIKVEELD 245
Query: 151 SNVFIRTNLMNLYLMSGGEC-GVGCARLLFDDMPARSVVSWNSLL--KGYVKRGDIDGAW 207
S++ + +L++ Y +C V AR F + +VSWN++L G+ + GD A
Sbjct: 246 SDLLVGNSLVDYY----AKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAAL 301
Query: 208 K----------IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
+ +F E+ R+VV W ++IS CAQ+G+S AL L EM + V ++ V +V
Sbjct: 302 EFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMV 361
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
+AL AC+++ L+ GK IH ++ G + LN +LI MY CG I+++ +F
Sbjct: 362 SALPACSKLAALRQGKEIHQFI---IRCGLDTCNFILN-SLIDMYGRCGSIQKSRRIFDL 417
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEG 362
M +R+ VSW MI+ + G+ +A+ +TF +LSACSH G ++EG
Sbjct: 418 MPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEG 477
Query: 363 RQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCR 422
++F+ M + + P +E Y CMVDL SRAG +E ++ MP +PN AV GSLL CR
Sbjct: 478 WKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACR 537
Query: 423 IHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPP 482
IH N +LA A+ L E++P+ + Y+ L+AN+Y+AA RW+D A +R M + GV KPP
Sbjct: 538 IHCNPDLAEYAARYLF-ELEPQSSGNYV-LMANIYSAAGRWEDAAKIRCLMKERGVTKPP 595
Query: 483 GQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
G SW+++ LH FV GD+++ I + + + GY PD + + ++E
Sbjct: 596 GCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDE 651
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 160/324 (49%), Gaps = 47/324 (14%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
FQ+H+Q+++NG ++ ++LL Y +G + +A ++F+K + W ++ +
Sbjct: 30 FQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGL 89
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
E+++ L+ M+++ PD + + + C+ +R G+ V+ +L+ G+ N ++
Sbjct: 90 GDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVK 149
Query: 157 TNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
+++++++ +CG + AR F+++ + V WN ++ GY +G+
Sbjct: 150 GSILDMFI----KCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF------------ 193
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
++AL++F +M V + + + +A+SAC + L+ G+ I
Sbjct: 194 -------------------KKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREI 234
Query: 276 HSY---VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSM--I 330
H Y VEE S +LV N+L+ YA C +E A F +++ + VSW +M +
Sbjct: 235 HGYCIKVEELDS----DLLVG--NSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAV 288
Query: 331 TGFAKQGYAQEALLTFLGVLSACS 354
TGF + G + AL F + ACS
Sbjct: 289 TGFTQYGDGKAALEFFQRMHIACS 312
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 175/541 (32%), Positives = 290/541 (53%), Gaps = 63/541 (11%)
Query: 14 SSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHK 73
S+ A+T ++ +R + +H + NG+ K +++ L+ YV G L A
Sbjct: 13 SADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARN 72
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGL 133
+F++ + + W MI ++ S K++ M+ + P+ YTYS +L C GL
Sbjct: 73 LFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACD--GL 130
Query: 134 FREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSL 193
Q+HG +L G S+VF+R+ +L
Sbjct: 131 LNL-RQLHGSILKVGLESDVFVRS----------------------------------AL 155
Query: 194 LKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQ 253
+ Y K G+ A +F+EM ++V W ++I G AQN + L L+ M+RA DQ
Sbjct: 156 IDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQ 215
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
L + L AC + L+LG+ +H +V + + L+ LNNAL+ MY CG +E+A
Sbjct: 216 STLTSVLRACTGLALLELGRQVHVHV-----LKYDQDLI-LNNALLDMYCKCGSLEDANL 269
Query: 314 VF-RKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGG 357
+F R M ++ +SW++MI G A+ G++ +AL +T LGVL ACSH G
Sbjct: 270 LFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAG 329
Query: 358 FVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSL 417
V++G +F+ M +++GI P EHYGC++DL RAG +DEA L+ M +P DAV +
Sbjct: 330 LVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEP-DAVTWRI 388
Query: 418 LLG-CRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKM 476
LLG CR+H N +LA A++++ ++DP A Y+ L++N+YA +++W+DVA VR+KM
Sbjct: 389 LLGACRVHKNVDLAIYAAKEIL-KLDPADAGTYI-LLSNIYANSQKWEDVAEVRRKMRTR 446
Query: 477 GVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGI 536
GV+K PG SW++++ +H F+ GD+++ + I + L ++ + M+ GY PD + + +
Sbjct: 447 GVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQRLMRLGYVPDTNFVLQDL 506
Query: 537 E 537
E
Sbjct: 507 E 507
>gi|347954490|gb|AEP33745.1| chloroplast biogenesis 19, partial [Arabis hirsuta]
Length = 435
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 163/422 (38%), Positives = 258/422 (61%), Gaps = 34/422 (8%)
Query: 114 TEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYC------SNVFIRTNLMNLYLMSG 167
EP+ T+ LLS G G + G +L C ++V + T ++ +Y G
Sbjct: 10 VEPNHITFIALLS---GWGDLLSGSEALGDLLHGYACKLGLDRAHVMVGTAILGMYSKRG 66
Query: 168 GECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISG 227
ARL+FD M ++ V+WN+++ GY++ G +D A K+FDEMP R+++SWT MI+G
Sbjct: 67 R---FRKARLVFDYMEEKNSVTWNTMIDGYMRNGQVDDAVKLFDEMPERDLISWTAMING 123
Query: 228 CAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV-EENFSVG 286
+ G +AL+ F EM+ + V D VA++AAL+AC +G L G WIH YV ++F
Sbjct: 124 FVKKGFHEEALAWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVVSQDFKNN 183
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALL-- 344
V ++N+LI +Y CG +E A VF KM++R VSW S+I GFA G+A E+L+
Sbjct: 184 -----VRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGHAHESLVYF 238
Query: 345 -------------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSR 391
TF G L+AC+H G V+EG ++F+ M +++ I PRIEHYGC+VDL+SR
Sbjct: 239 RKMQEEGFKPNAVTFTGALAACNHVGLVEEGLRYFQSMKRDYRISPRIEHYGCLVDLYSR 298
Query: 392 AGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLA 451
AG +++A +VQ+MPMKPN+ V+GSLL CR N + ++ K +++++ + + Y+
Sbjct: 299 AGRLEDALKVVQSMPMKPNEVVIGSLLAACRTQGNNTVLAERVMKHLSDLNVKSHSNYVI 358
Query: 452 LVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYK 511
L +N+YAA +W+ + +R+KM +G++K PG S ++I+ H F+AGD+T+ + + I +
Sbjct: 359 L-SNMYAADGKWEGASKMRRKMKGLGLKKEPGFSSIEIDDCTHVFMAGDNTHVETTNIRE 417
Query: 512 TL 513
L
Sbjct: 418 VL 419
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 141/327 (43%), Gaps = 48/327 (14%)
Query: 41 SQIIINGFSQKNYIL-AKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
++++ + +KN + ++ Y+ +G + +A K+F++ W MI G +
Sbjct: 71 ARLVFDYMEEKNSVTWNTMIDGYMRNGQVDDAVKLFDEMPERDLISWTAMINGFVKKGFH 130
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
E+++ +++M +PD L+ C G G +H V++ + +NV + +L
Sbjct: 131 EEALAWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVVSQDFKNNVRVSNSL 190
Query: 160 MNLYLMSGGECGVGC---ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
++LY C GC AR +FD M R+VVSWNS++ G+
Sbjct: 191 IDLY------CRCGCVEFARQVFDKMEKRTVVSWNSVIVGF------------------- 225
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
A NG + ++L F +M+ + V AL+AC +G ++ G
Sbjct: 226 ------------AANGHAHESLVYFRKMQEEGFKPNAVTFTGALAACNHVGLVEEGLRYF 273
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAK 335
++ ++ + + L+ +Y+ G +E+A V + M + N V S++
Sbjct: 274 QSMKRDYRISPR---IEHYGCLVDLYSRAGRLEDALKVVQSMPMKPNEVVIGSLLAACRT 330
Query: 336 QG---YAQEALLTFLGVLSACSHGGFV 359
QG E ++ L L+ SH +V
Sbjct: 331 QGNNTVLAERVMKHLSDLNVKSHSNYV 357
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
IH ++ F + L+ Y G + A +VF+K E + WN +I G A +
Sbjct: 171 IHRYVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGH 230
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+S+ +++M ++ +P+ T++ L+ C GL EG
Sbjct: 231 AHESLVYFRKMQEEGFKPNAVTFTGALAACNHVGLVEEG 269
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 172/516 (33%), Positives = 284/516 (55%), Gaps = 56/516 (10%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H Q++ YI LL Y G L +A +FE+ + + +W MI G+ ++
Sbjct: 101 LHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHC 160
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
P +++ LYK+M + PDE T + L+S CA G ++H IR
Sbjct: 161 PNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSH-----------IREM 209
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
M + CA V ++L+ Y K GD+ A ++FD++ ++V
Sbjct: 210 DMKI-----------CA------------VLGSALVNMYAKCGDLKTARQVFDQLSDKDV 246
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRR-ARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+W+ +I G +N +S +AL LF E+ + + ++V ++A +SACA++GDL+ G+W+H
Sbjct: 247 YAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHD 306
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y+ ++ VSLNN+LI M++ CG+I+ A +F M ++ +SW SM+ G A G
Sbjct: 307 YITRT----QKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHG 362
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+EAL +TF+GVL+ACSH G V EG++ F + +G++ + EHY
Sbjct: 363 LGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHY 422
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
GCMVDL RAGL+ EA ++ MP++P+ A+ GS+L CR++NN EL + A+ L+ E++
Sbjct: 423 GCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLL-ELE 481
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P Y+ L++N+YA K W +V VR+ M + G++K PG S V I+ + H F+AGD +
Sbjct: 482 PTNDGVYI-LLSNIYARRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCS 540
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ + + I L ++ + GY D SE+ L I++
Sbjct: 541 HPEIAEISIMLRQVREKLKLVGYVADTSEVLLNIDD 576
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 182/386 (47%), Gaps = 60/386 (15%)
Query: 43 IIINGFSQKNYILAKLLAFYVTSGYLI--NAHKVFEKTENPSTAIWNQMIRGHARSETPE 100
+++ GF L KL+A ++ G L A+ VF T WN M+R S P
Sbjct: 1 MVVTGFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPR 60
Query: 101 KSVYLYKQMIDKETE-PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
+++ Y +M+++ PD +T+ LL CA F+ G+ +HG+V+ S+++I T L
Sbjct: 61 RALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTL 120
Query: 160 MNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
+N+Y CG + AR LF+ M R+ V W S++ GY+K
Sbjct: 121 LNMY----AACGDLKSARFLFERMGHRNKVVWTSMISGYMK------------------- 157
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
N +AL L+ +M D+V + +SACAE+ DL +G +HS+
Sbjct: 158 ------------NHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSH 205
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ E + L +AL++MYA CG+++ A VF ++ ++ +W+++I G+ K
Sbjct: 206 IREM----DMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNR 261
Query: 339 AQEAL----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+ EAL +T L V+SAC+ G ++ GR + + + +
Sbjct: 262 STEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQK-GHSVSLN 320
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMK 408
++D+FS+ G +D A + +M K
Sbjct: 321 NSLIDMFSKCGDIDAAKRIFDSMSYK 346
>gi|242036805|ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
gi|241919651|gb|EER92795.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
Length = 531
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 180/522 (34%), Positives = 272/522 (52%), Gaps = 61/522 (11%)
Query: 16 KALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS----GYLINA 71
K+ T R+ +L + + + + Q+H+ +++ GF L +L+ + +S G +A
Sbjct: 4 KSGTERRQPALWRRCRSLRQIKQVHALMVLRGFLSDPSALRELI--FASSVGVRGGTAHA 61
Query: 72 HKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKET------EPDEYTYSFLL 125
VF++ +P ++N +IRG A S P +V +Y +M PD+ T+ F+L
Sbjct: 62 RLVFDRIPHPDRFMYNTLIRGAAHSYAPRDAVSIYARMARHSAGCGGGVRPDKRTFPFVL 121
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSG----------GEC----- 170
CA G G QVH V+ +G S+ F+R L+ ++ G GE
Sbjct: 122 RACAAMGASETGAQVHAHVVKAGCESDAFVRNALIGMHATCGDLGAAAALFDGEAREDAV 181
Query: 171 -------------GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
+G AR LFD+ P + +VSWN ++ Y K GD+ A ++FD P R+
Sbjct: 182 AWSAMISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRD 241
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VVSW MISG + G +QA+ LF +M+ D V +++ LSACA+ GD+ G+ +H
Sbjct: 242 VVSWNAMISGYVRCGSHKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDMDAGRRLHR 301
Query: 278 YVEENFS-VGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
++ FS +G VL NALI MYA CG + A VF MQ +N +W S+I G A
Sbjct: 302 FLSGRFSRIGPSTVL---GNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALH 358
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G+ EA+ +TF+ VL ACSHGG VD+G ++F M Q + I+P ++H
Sbjct: 359 GHVTEAIDVFQKMLQGNVKPDEITFVAVLVACSHGGMVDKGHEYFNLMQQRYMIEPNVKH 418
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YGCMVD+ SRAGL+ EAF + M ++PN + +LL CRIH ELA Q+L+
Sbjct: 419 YGCMVDMLSRAGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGELELAEHANQELLKA- 477
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPG 483
A+G L++N+YA+ W +R+ M GV K G
Sbjct: 478 -RSDASGDFVLLSNIYASVGEWLGSENMRKLMDDSGVNKEAG 518
>gi|357502061|ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496334|gb|AES77537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 605
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 184/569 (32%), Positives = 296/569 (52%), Gaps = 85/569 (14%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH+Q+I Q YI KL+A Y + L +A VF + +P+ ++N +IR ++ S
Sbjct: 40 QIHAQLIKCHLHQDPYIAPKLIASYSLTNNLSSAVNVFNQVPDPNVHLYNYLIRAYSLSG 99
Query: 98 TPEKSVYLYKQMIDKETE---PDEYTYSFLLSVC-ARCGLFREGEQVHGRVLASGYCSNV 153
S+ + ++ + D +TY FLL C + VH V G+ ++
Sbjct: 100 NESNSLCAFGVLLKMHVDGVLADNFTYPFLLKGCNGSSSWLSLVKMVHAHVEKLGFYWDI 159
Query: 154 FIRTNLMNLYL-------------------------MSGGECGVG---CARLLFDDMPAR 185
F+ +L++ Y M GG G A +FD+MP R
Sbjct: 160 FVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMPER 219
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTM--------------------- 224
VSWN++L G+ K G++D A+K+F+ M R++VSW+TM
Sbjct: 220 DRVSWNTMLDGFTKAGEMDKAFKLFERMAERDIVSWSTMVCGYSKNGDMDMARMLFDRCP 279
Query: 225 ----------ISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKW 274
ISG A+ G+ ++A++L +EM ++ + LD ++ L+ACAE G L LGK
Sbjct: 280 VKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAESGMLGLGKK 339
Query: 275 IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGF 333
+H ++F R + N+ I MYA CG +++A+ VF M+ ++ VSW SMI GF
Sbjct: 340 MH----DSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMIHGF 395
Query: 334 AKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
G+ ++++ TF+G+L AC+H G V+EGR +F M + +GI P+
Sbjct: 396 GIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGRGYFYSMQRVYGIVPQ 455
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
IEHYGCMVDL R G + EAF LV++MP +PN +LG+LL CR+HN+ +LA+ V++ L
Sbjct: 456 IEHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLLGACRMHNDVKLATSVSKYLF 515
Query: 439 AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVA 498
+ + G +L++N+YA + W +VA VR++M G +KP G S +++ +H+F
Sbjct: 516 KLVPSD--PGNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQKPSGVSSIEVEEEVHEFTV 573
Query: 499 GDSTYKQASLIYKTLGEITMQAMQEGYKP 527
D ++ ++ IY + + Q GY P
Sbjct: 574 RDWSHPKSGDIYNMIDRLVHDLRQVGYVP 602
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 175/505 (34%), Positives = 278/505 (55%), Gaps = 25/505 (4%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGH 93
+T Q+H + + + +I L+ Y ++A +VF+ + WN +I +
Sbjct: 168 RTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERNVVSWNSLITCY 227
Query: 94 ARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNV 153
++ +++ L+ +M+ PDE T S ++S CA REG QVH ++ +
Sbjct: 228 EQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDD 287
Query: 154 FIRTN-LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFD 211
+ N L+++Y +CG AR +FD MP+RSVVS S+L GY K +++ A +F
Sbjct: 288 MVLNNALVDMY----AKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFS 343
Query: 212 EMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKL 271
+M +NV++W +I+ AQNG+ +A+ LF +++R + L+AC I L+L
Sbjct: 344 QMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQL 403
Query: 272 GKWIHSYV-EENFSVGREP-VLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSM 329
G+ H +V +E F P V + N+L+ MY G I++ VF +M R+ VSW +M
Sbjct: 404 GQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAM 463
Query: 330 ITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWG 374
I G+A+ G A++AL +T +GVLSAC H G VDEGR+ F M ++ G
Sbjct: 464 IVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHG 523
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVA 434
I P +HY CMVDL RAG + EA L+++MP +P+ + SLL CR+H N EL + A
Sbjct: 524 ITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGACRLHKNVELGERTA 583
Query: 435 QKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLH 494
+L E+DPE + Y+ L++N+YA +W DV VR+ M GV K PG SW++I ++
Sbjct: 584 GRLF-ELDPENSGPYV-LLSNMYAEMGKWADVFRVRRSMKDRGVSKQPGCSWIEIGSKMN 641
Query: 495 DFVAGDSTYKQASLIYKTLGEITMQ 519
F+A D+ + + I+ TL I M+
Sbjct: 642 VFLARDNRHPCRNEIHSTLRIIQME 666
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 154/345 (44%), Gaps = 80/345 (23%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
H ++ + + + ++L L++ Y G L A +VF+ +T +N ++ +AR P
Sbjct: 40 HGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYARLGRP 99
Query: 100 EKSVYLYKQMIDKETEPDE-------------------------------------YTYS 122
+++ L++ + D PD+ Y+++
Sbjct: 100 DEARALFEAIPD----PDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFA 155
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGC-ARLLFDD 181
LS CA R GEQVHG V S + +V I T L+++Y +C AR +FD
Sbjct: 156 SALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMY----AKCERPVDARRVFDA 211
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
MP R+VVSWNSL+ Y QNG +AL LF
Sbjct: 212 MPERNVVSWNSLITCY-------------------------------EQNGPVGEALVLF 240
Query: 242 NEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHM 301
EM D+V L + +SACA + + G+ +H+++ + + + V LNNAL+ M
Sbjct: 241 VEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMV---LNNALVDM 297
Query: 302 YASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
YA CG EA +F M R+ VS TS++ G+AK ++A + F
Sbjct: 298 YAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVF 342
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 134/287 (46%), Gaps = 28/287 (9%)
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKR 200
HG VL S F+ L++ Y G + AR +FD +P R+ S+N+LL Y +
Sbjct: 40 HGCVLKSPVAGETFLLNTLVSTYARLGR---LREARRVFDGIPLRNTFSYNALLSAYARL 96
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR--QALSLFNEMRRARVGLDQVALVA 258
G D A +F+ +P + S+ +++ A++G+ AL M L+ + +
Sbjct: 97 GRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFAS 156
Query: 259 ALSACAEIGDLKLGKWIHSYVEENFSVGREPVL--VSLNNALIHMYASCGEIEEAYGVFR 316
ALSACA DL+ G+ +H V R P V + AL+ MYA C +A VF
Sbjct: 157 ALSACAAEKDLRTGEQVHGL------VARSPHADDVHIGTALVDMYAKCERPVDARRVFD 210
Query: 317 KMQRRNTVSWTSMITGFAKQGYAQEALLTFL---------------GVLSACSHGGFVDE 361
M RN VSW S+IT + + G EAL+ F+ V+SAC+ E
Sbjct: 211 AMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAERE 270
Query: 362 GRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
GRQ M + ++ + +VD++++ G EA + +MP +
Sbjct: 271 GRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSR 317
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 161/531 (30%), Positives = 285/531 (53%), Gaps = 58/531 (10%)
Query: 25 SLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTA 84
+LL+ + L Q+H+ II++G + +L KL++ T+G + A ++F NP +
Sbjct: 32 ALLRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSF 91
Query: 85 IWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRV 144
+++ +++ ++ +V Y++M+ YT++ ++ CA R G+++H V
Sbjct: 92 LFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHV 151
Query: 145 LASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDID 204
+ GY S+++++ L+ LY K D+
Sbjct: 152 MVCGYGSDMYVQAALIALY----------------------------------AKASDMK 177
Query: 205 GAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACA 264
A K+FD MP R +++W ++ISG QNG ++++ LF+ M + D +V+ LS+C+
Sbjct: 178 VAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCS 237
Query: 265 EIGDLKLGKWIHSYVEEN-FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNT 323
++G L G W+H Y + N F + V L +LI+MY CG + +A VF M+ RN
Sbjct: 238 QLGALDFGCWLHDYADGNGFDLN-----VVLGTSLINMYTRCGNVSKAREVFDSMKERNV 292
Query: 324 VSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFEC 368
V+WT+MI+G+ GY ++A+ +TF+ VLSAC+H G +D+GR+ F
Sbjct: 293 VTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSS 352
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQN-MPMKPNDAVLGSLLLGCRIHNNA 427
M + +G+ P +EH CMVD+F RAGL+++A+ ++ +P +P AV S+L CR+H N
Sbjct: 353 MKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNF 412
Query: 428 ELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWV 487
+L +VA+ +++ ++PE G+ +++N+YA A R V VR M + ++K G S +
Sbjct: 413 DLGVKVAEHVLS-VEPEN-PGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTI 470
Query: 488 QINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+IN + F GD ++ Q + IY+ L E+ + + GY P L +EE
Sbjct: 471 EINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEE 521
>gi|297815228|ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321335|gb|EFH51756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 629
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 189/608 (31%), Positives = 300/608 (49%), Gaps = 97/608 (15%)
Query: 11 PATSSKALTTRQIF-----SLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS 65
P + +++R+IF L + N + + Q+H+QII Q +I KL++
Sbjct: 6 PVRAPSWVSSRRIFEERLQDLPKCANLNQ-VKQLHAQIIRRNLHQDLHIAPKLISALSLC 64
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
A +VF + + P+ + N +IR HA + P ++ +++ +M D +TY FLL
Sbjct: 65 RQTNLALRVFNQVQEPNVHLCNSLIRAHALNSQPYQAFFVFSEMQRFGLFADNFTYPFLL 124
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPAR 185
C+ + +H + G S++++ L++ Y GG GV A LF+ M R
Sbjct: 125 KACSGLSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGG-LGVRDAMKLFEKMSER 183
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN--- 242
VSWNS+L G VK G++ A K+FDEMP R+++SW TM+ G A+ + +A LF
Sbjct: 184 DTVSWNSMLGGLVKAGELRDARKLFDEMPQRDLISWNTMLDGYARCREMSRAFELFEKMP 243
Query: 243 ------------------EMRRARVGLDQVALVAA--------LSACAEIGDLK------ 270
+M ARV D++ A ++ AE G LK
Sbjct: 244 ERNTVSWSTMVMGYSKAGDMEMARVMFDKMPFPAKNVVTWTIIIAGYAEKGLLKEADKLV 303
Query: 271 -----------------------------LGKWIHSYVEENFSVGREPVLVSLNNALIHM 301
LG HS ++++ VL NAL+ M
Sbjct: 304 DQMVASGLRFDAAAAISILAACAESGLLSLGMRAHSIIKKSNLNSNASVL----NALLDM 359
Query: 302 YASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTF 346
YA CG +++A+ VF M +++ VSW +M+ G G+ +EA+ +TF
Sbjct: 360 YAKCGSLKKAFDVFNDMPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRKEGIWPDKVTF 419
Query: 347 LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP 406
+ VL +C+H G +DEG +F M + + + P++EHYGC+VDL R G + EA +VQ MP
Sbjct: 420 IAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPKVEHYGCLVDLLGRGGRLKEAIKVVQTMP 479
Query: 407 MKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDV 466
M+PN + G+LL CR+HN ++A +V LV ++DP Y L++N+YAAA+ W+ V
Sbjct: 480 MEPNVVIWGALLGACRMHNEVDIAKEVLDNLV-KLDPSDPGNY-TLLSNIYAAAEDWEGV 537
Query: 467 AAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYK 526
A +R KM MGV KP G S V++ +H+F D ++ ++ IY+ LG + E
Sbjct: 538 ADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLI-----EPQD 592
Query: 527 PDISELFL 534
PD+ L L
Sbjct: 593 PDMEVLVL 600
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 177/505 (35%), Positives = 281/505 (55%), Gaps = 25/505 (4%)
Query: 50 QKNYILAK-LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQ 108
++N I + ++ + G + A K+F + + W+ +I + ++E E+++ L+K+
Sbjct: 220 ERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKE 279
Query: 109 MIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGG 168
M DE +LS C+R + G+ VHG V+ G + V ++ L+++Y S
Sbjct: 280 MNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMY--SSC 337
Query: 169 ECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGC 228
E V A+ LF + +SWNS++ GYVK G+I+ A +FD MP ++ VSW+ MISG
Sbjct: 338 E-EVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGY 396
Query: 229 AQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGRE 288
AQ + + L LF EM+ D+ LV+ +SAC + L GKWIH+Y+ +N G +
Sbjct: 397 AQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKN---GLK 453
Query: 289 PVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----- 343
+ + L LI+MY G +E+A VF+ ++ + +W ++I G A G ++L
Sbjct: 454 -INIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSE 512
Query: 344 ----------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAG 393
+TF+ VL AC H G VDEG + F M Q I P I+HYGCMVDL RAG
Sbjct: 513 MKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAG 572
Query: 394 LMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALV 453
++ EA L+++MPM P+ + G+LL C+ + + E ++ +KLV E+ P+ G+ L+
Sbjct: 573 MLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLV-ELHPDH-DGFNVLL 630
Query: 454 ANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTL 513
+N+YA+ W DV VR M + GV K PG S ++ +G +H+F+AGD T+ Q I L
Sbjct: 631 SNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHML 690
Query: 514 GEITMQAMQEGYKPDISELFLGIEE 538
E+ + EGY PD E+ L I+E
Sbjct: 691 DEMAKKLKLEGYAPDTREVSLDIDE 715
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 139/476 (29%), Positives = 237/476 (49%), Gaps = 89/476 (18%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYL-IN- 70
T LT + + LQ K QI SQ+I++GF + ++ ++LL F ++ IN
Sbjct: 19 TLKPTLTLPILETHLQKCQNIKQFNQILSQMILSGFFKDSFAASRLLKFSTELPFININQ 78
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA- 129
++++F ENP+ I N M++G+ + +P K++++YK M++ D YTY L C+
Sbjct: 79 SYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSI 138
Query: 130 RCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVS 189
R F +G+ + VL G+ S+V+I+ L+N+Y + G + AR +FD +VS
Sbjct: 139 RLAEF-DGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGN---LSDARKVFDGSSVLDMVS 194
Query: 190 WNSLLKGYV-------------------------------KRGDIDGAWKIFDEMPHRNV 218
WNS+L GYV K+G+++ A K+F+EM +++
Sbjct: 195 WNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDL 254
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
VSW+ +IS QN +AL LF EM + +D+V +++ LSAC+ + + GK +H
Sbjct: 255 VSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGL 314
Query: 279 VEENFSVGREPVLVSLNNALIHMYAS-------------------------------CGE 307
V VG E V+L NALIHMY+S CGE
Sbjct: 315 V---VKVGIE-TYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGE 370
Query: 308 IEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF---------------LGVLSA 352
IE+A +F M ++ VSW++MI+G+A+Q E L+ F + V+SA
Sbjct: 371 IEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISA 430
Query: 353 CSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
C+H +D+G+ + +N G+K I +++++ + G +++A + + + K
Sbjct: 431 CTHLAALDQGKWIHAYIRKN-GLKINIILGTTLINMYMKLGCVEDALEVFKGLEEK 485
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 3/172 (1%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
IH+ I NG + L+ Y+ G + +A +VF+ E + WN +I G A +
Sbjct: 443 IHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGL 502
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
+KS+ + +M + P+E T+ +L C GL EG + ++
Sbjct: 503 VDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYG 562
Query: 159 LMNLYLMSGGECGVGCARLLFDDMP-ARSVVSWNSLLKGYVKRGDIDGAWKI 209
M L G + A L + MP A V +W +LL K GD + +I
Sbjct: 563 CMVDLLGRAGM--LKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERI 612
>gi|347954488|gb|AEP33744.1| chloroplast biogenesis 19, partial [Aethionema grandiflorum]
Length = 413
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 168/409 (41%), Positives = 249/409 (60%), Gaps = 30/409 (7%)
Query: 115 EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLM---NLYLMSGGECG 171
EP+ T+ L+S CG F G + G +L C RT++M + M C
Sbjct: 14 EPNHITFIALIS---GCGDFPTGSETLGDLLHGYACKLGLDRTHVMVGTAILGMYSKRCR 70
Query: 172 VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQN 231
G AR +FD M ++ V+WN+++ Y++ G +D A K+FDEMP +++SWT MI+G +
Sbjct: 71 FGKARCVFDYMEDKNSVTWNTMIDAYMRSGKVDRAVKLFDEMPDPDLISWTAMINGFVKK 130
Query: 232 GKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV-EENFSVGREPV 290
G +AL F EM+ + V D VA++AAL+AC +G L G W+H YV ++F
Sbjct: 131 GFHEEALVWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWVHRYVLSQDFKNN---- 186
Query: 291 LVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALL------ 344
V +NN+LI +Y CG +E A VF KM++R VSW S+I G A G A E+L+
Sbjct: 187 -VRVNNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGSAANGNAHESLVYFRKMQ 245
Query: 345 ---------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLM 395
TF G L+ACSH G V+EG Q+F+ M +++ I PRIEHYGC+VDL+SRAG +
Sbjct: 246 EEGFNPDAVTFTGALTACSHVGLVEEGIQYFQTMKRDYKISPRIEHYGCLVDLYSRAGRL 305
Query: 396 DEAFSLVQNMPMKPNDAVLGSLLLGCRIH-NNAELASQVAQKLVAEIDPEQAAGYLALVA 454
++A LVQ+M MKPN+ V+GSLL CR H NN ELA ++ + L +E++ + + Y+ L +
Sbjct: 306 EDALKLVQSMSMKPNEVVIGSLLAACRTHGNNTELAERLMKHL-SEMNVKGHSNYVIL-S 363
Query: 455 NVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
N+YAA +W+ +R+KM +G++K PG S ++I+ H F+AGDS +
Sbjct: 364 NMYAADGKWEGAXKMRRKMKGLGLKKQPGFSSIEIDDHTHVFMAGDSAH 412
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 131/309 (42%), Gaps = 47/309 (15%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
++ Y+ SG + A K+F++ +P W MI G + E+++ +++M +PD
Sbjct: 92 MIDAYMRSGKVDRAVKLFDEMPDPDLISWTAMINGFVKKGFHEEALVWFREMQISGVKPD 151
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGC--- 174
L+ C G G VH VL+ + +NV + +L++LY C GC
Sbjct: 152 YVAIIAALAACTNLGALSFGLWVHRYVLSQDFKNNVRVNNSLIDLY------CRCGCVEF 205
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
AR +FD M R+VVSWNS+ I G A NG +
Sbjct: 206 AREVFDKMEKRTVVSWNSV-------------------------------IVGSAANGNA 234
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
++L F +M+ D V AL+AC+ +G ++ G ++ ++ + +
Sbjct: 235 HESLVYFRKMQEEGFNPDAVTFTGALTACSHVGLVEEGIQYFQTMKRDYKISPR---IEH 291
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRR-NTVSWTSMITGFAKQGYAQ---EALLTFLGVL 350
L+ +Y+ G +E+A + + M + N V S++ G E L+ L +
Sbjct: 292 YGCLVDLYSRAGRLEDALKLVQSMSMKPNEVVIGSLLAACRTHGNNTELAERLMKHLSEM 351
Query: 351 SACSHGGFV 359
+ H +V
Sbjct: 352 NVKGHSNYV 360
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H ++ F + L+ Y G + A +VF+K E + WN +I G A +
Sbjct: 174 VHRYVLSQDFKNNVRVNNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGSAANGN 233
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
+S+ +++M ++ PD T++ L+ C+ GL EG Q
Sbjct: 234 AHESLVYFRKMQEEGFNPDAVTFTGALTACSHVGLVEEGIQ 274
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 161/531 (30%), Positives = 285/531 (53%), Gaps = 58/531 (10%)
Query: 25 SLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTA 84
+LL+ + L Q+H+ II++G + +L KL++ T+G + A ++F NP +
Sbjct: 96 ALLRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSF 155
Query: 85 IWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRV 144
+++ +++ ++ +V Y++M+ YT++ ++ CA R G+++H V
Sbjct: 156 LFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHV 215
Query: 145 LASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDID 204
+ GY S+++++ L+ LY K D+
Sbjct: 216 MVCGYGSDMYVQAALIALY----------------------------------AKASDMK 241
Query: 205 GAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACA 264
A K+FD MP R +++W ++ISG QNG ++++ LF+ M + D +V+ LS+C+
Sbjct: 242 VAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCS 301
Query: 265 EIGDLKLGKWIHSYVEEN-FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNT 323
++G L G W+H Y + N F + V L +LI+MY CG + +A VF M+ RN
Sbjct: 302 QLGALDFGCWLHDYADGNGFDLN-----VVLGTSLINMYTRCGNVSKAREVFDSMKERNV 356
Query: 324 VSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFEC 368
V+WT+MI+G+ GY ++A+ +TF+ VLSAC+H G +D+GR+ F
Sbjct: 357 VTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSS 416
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQN-MPMKPNDAVLGSLLLGCRIHNNA 427
M + +G+ P +EH CMVD+F RAGL+++A+ ++ +P +P AV S+L CR+H N
Sbjct: 417 MKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNF 476
Query: 428 ELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWV 487
+L +VA+ +++ ++PE G+ +++N+YA A R V VR M + ++K G S +
Sbjct: 477 DLGVKVAEHVLS-VEPEN-PGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTI 534
Query: 488 QINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+IN + F GD ++ Q + IY+ L E+ + + GY P L +EE
Sbjct: 535 EINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEE 585
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 172/497 (34%), Positives = 268/497 (53%), Gaps = 27/497 (5%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
++A Y +G L A +F+K ++A W MI G ++E +++ L ++ + P
Sbjct: 495 IIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPS 554
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCAR 176
+ +++ LS CA G G +H + +G N ++ L+++Y +CG V
Sbjct: 555 DSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMY----AKCGNVEDGS 610
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
+F + + VSWNSL+ G + +D A +F++MP R+VVSWT +IS Q G
Sbjct: 611 HVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEV 670
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
AL LF +M + +Q+ + + LSAC +G +KLG+ H+ + F +G + L + N
Sbjct: 671 ALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALI---FKLGFDTFLF-VGN 726
Query: 297 ALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------- 343
+LI MY CG E+ + VF +M + ++W +++ G A+ G +EA+
Sbjct: 727 SLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILP 785
Query: 344 --LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
++FLGVL ACSH G VDEG F M Q +GI P + HY CMVDL RAG + EA +L
Sbjct: 786 DQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEAL 845
Query: 402 VQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAK 461
++NMP+KP+ + +LL CRIH N EL +VA++L P+ A L++N++A+
Sbjct: 846 IENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSAT--YVLLSNLFASQG 903
Query: 462 RWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAM 521
W VA +R+ M G+ K PG SW+Q+ LH FV GD T+ Q IY L E
Sbjct: 904 MWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCFR 963
Query: 522 QEGYKPDISELFLGIEE 538
GY PD + + +EE
Sbjct: 964 ATGYMPDTNFVLHDVEE 980
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 170/336 (50%), Gaps = 43/336 (12%)
Query: 89 MIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASG 148
++ + R+ + + +++ ++ M E +EY+++ +++ A+CG + Q++ RV
Sbjct: 402 ILNAYTRNGSLDLAMHFFETM----PERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQ- 456
Query: 149 YCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWK 208
V +T +M Y G + ARL+FD++ +VV+WN+++ GY + G + A
Sbjct: 457 ---TVATKTAMMTAYAQVGR---IQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKD 510
Query: 209 IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGD 268
+F +MP +N SW MI+G QN +SR+AL L E+ R+ + +ALSACA IGD
Sbjct: 511 LFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGD 570
Query: 269 LKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTS 328
+++G+ IHS + V+ N LI MYA CG +E+ VFR ++ ++TVSW S
Sbjct: 571 VEIGRVIHSLAIKTGCQFNSYVM----NGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNS 626
Query: 329 MITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDL 388
+I+G S +D+ R FE M K + + ++
Sbjct: 627 LISGL--------------------SENYMLDDARVVFEKMP-----KRDVVSWTAIISA 661
Query: 389 FSRAGLMDEAFSLVQNM---PMKPNDAVLGSLLLGC 421
+ +AG + A L +M +KPN + SLL C
Sbjct: 662 YVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSAC 697
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 174/366 (47%), Gaps = 32/366 (8%)
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
G + A +VF + WN MI G++++ +++ L+ + K T++ LL
Sbjct: 185 GRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR----TWTILL 240
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPAR 185
+ A+ G E +V S NV +++ Y+ +G + AR LFD+MP +
Sbjct: 241 TGYAKEGRIEEAREV----FESMTERNVVSWNAMISGYVQNGD---LKNARKLFDEMPEK 293
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
+V SWNS++ GY + A ++FD+MP RN VSW MISG +A +F +M
Sbjct: 294 NVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMC 353
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC 305
R DQ V LSA + DL+L I S G E +V + +A+++ Y
Sbjct: 354 RTVARPDQSIFVVVLSAITGLDDLEL---IGSLRPIAIKTGYEGDVV-VGSAILNAYTRN 409
Query: 306 GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-----------LTFLGVLSACS 354
G ++ A F M RN SWT+MI FA+ G +A+ T +++A +
Sbjct: 410 GSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYA 469
Query: 355 HGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL 414
G + + R F+ + + P + + ++ +++ G++ EA L Q MP+K N A
Sbjct: 470 QVGRIQKARLIFDEI-----LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVK-NSASW 523
Query: 415 GSLLLG 420
+++ G
Sbjct: 524 AAMIAG 529
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 156/391 (39%), Gaps = 92/391 (23%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS-- 96
IHS I G +Y++ L++ Y G + + VF T WN +I G + +
Sbjct: 577 IHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYM 636
Query: 97 ---------ETPEKSVY--------------------LYKQMIDKETEPDEYTYSFLLSV 127
+ P++ V L+ M+ + +P++ T + LLS
Sbjct: 637 LDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSA 696
Query: 128 CARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSV 187
C G + GEQ H + G+ + +F+ +L+ +Y G E G +F++MP +
Sbjct: 697 CGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCGYEDGF----CVFEEMPEHDL 752
Query: 188 VSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRA 247
++WN++L G CAQNG ++A+ +F +M
Sbjct: 753 ITWNAVLVG-------------------------------CAQNGLGKEAIKIFEQMEVE 781
Query: 248 RVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGE 307
+ DQ++ + L AC+ G + G W H + G P LV ++ + G
Sbjct: 782 GILPDQMSFLGVLCACSHAGLVDEG-WAH-FNSMTQKYGIMP-LVYHYTCMVDLLGRAGY 838
Query: 308 IEEAYGVFRKMQ-RRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFF 366
+ EA + M + ++V W EAL L AC V+ G++
Sbjct: 839 LSEAEALIENMPVKPDSVIW--------------EAL------LGACRIHRNVELGQRVA 878
Query: 367 ECMNQNWGIKPRIEHYGCMVDLFSRAGLMDE 397
E + Q KP+ Y + +LF+ G+ D+
Sbjct: 879 ERLFQM--TKPKSATYVLLSNLFASQGMWDK 907
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 12/153 (7%)
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSL 240
+ P + N+ ++ + G ++ A ++F+EM R+VVSW +MI+G +QNGK +A L
Sbjct: 165 ETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLL 224
Query: 241 FNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIH 300
F+ A VG + L+ A+ G ++ + E F E +VS NA+I
Sbjct: 225 FD----AFVGKNIRTWTILLTGYAKEGRIEEAR-------EVFESMTERNVVSW-NAMIS 272
Query: 301 MYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF 333
Y G+++ A +F +M +N SW S++TG+
Sbjct: 273 GYVQNGDLKNARKLFDEMPEKNVASWNSVVTGY 305
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALL---TFLG---- 348
N I G +EEA VF +M +R+ VSW SMI G+++ G EA L F+G
Sbjct: 175 NTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR 234
Query: 349 ----VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQN 404
+L+ + G ++E R+ FE M + + + M+ + + G + A L
Sbjct: 235 TWTILLTGYAKEGRIEEAREVFESMTER-----NVVSWNAMISGYVQNGDLKNARKLFDE 289
Query: 405 MPMKPNDAVLGSLLLG-CRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRW 463
MP K N A S++ G C + +E A++L ++ + ++ +++ + W
Sbjct: 290 MPEK-NVASWNSVVTGYCHCYRMSE-----ARELFDQMPERNSVSWMVMISGYVHISDYW 343
Query: 464 Q 464
+
Sbjct: 344 E 344
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 175/530 (33%), Positives = 293/530 (55%), Gaps = 67/530 (12%)
Query: 49 SQKNYIL-AKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYK 107
++KN + ++ Y+ S + +A K+F + N + WN MI G+A++ + ++YL++
Sbjct: 111 AKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFE 170
Query: 108 QMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSG 167
+M E + +++ ++S+ A+CG E ++ R+ I M L
Sbjct: 171 KM----PERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERD-----VISWTAMIAGLSKN 221
Query: 168 GECGVGCARLLFDDMPARSVVSWNSLLKGY------------------------------ 197
G + ARLLFD MP R+VVSWN+++ GY
Sbjct: 222 GR--IDEARLLFDRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITG 279
Query: 198 -VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR-VGLDQVA 255
++ GD+ A K+F+EMP +NV+SWTTMI+GC Q G+S +AL +F+ M +Q
Sbjct: 280 LIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGT 339
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
V+ L AC+ + L G+ +H + + +V ++ V +ALI+MY+ CGE+ A +F
Sbjct: 340 FVSVLGACSNLAGLGEGQQVHQIISK--TVYQDSTFVV--SALINMYSKCGELGTARKMF 395
Query: 316 RK--MQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGF 358
+R+ VSW +I +A GY +EA+ +T++G+LSACSH G
Sbjct: 396 DDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGL 455
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLL 418
V+EG ++F+ + ++ I R +HY C+VDL RAG + EAF ++ + KP+ V G+LL
Sbjct: 456 VEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALL 515
Query: 419 LGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
GC +H N ++ Q A+KL+ E++PE A YL L++N+YA+ +W++ A VR KM G+
Sbjct: 516 AGCNVHANVKIGKQAAKKLL-EVEPENAGTYL-LLSNIYASTGKWREAARVRLKMKDKGL 573
Query: 479 RKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
+K PG SW+++ +H FV GD ++ Q+ LIY L ++ + + GY+P+
Sbjct: 574 KKQPGCSWIEVGNRVHVFVVGDKSHSQSKLIYSLLRDLHSKMKKAGYEPN 623
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 153/302 (50%), Gaps = 45/302 (14%)
Query: 107 KQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMS 166
+++ D+ EPD T++ ++S +CG+ E ++ RV A NV T ++ Y+ S
Sbjct: 72 RRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAK---KNVVTWTAMVGGYIRS 128
Query: 167 GGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMIS 226
+ A LF++MP ++VVSWN+++ GY + G ID A +F++MP RNVVSW T++S
Sbjct: 129 N---KISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMS 185
Query: 227 GCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKL-------------GK 273
AQ G+ +A LF+ M V + A++A LS I + +L
Sbjct: 186 MLAQCGRIEEARRLFDRMPERDV-ISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNA 244
Query: 274 WIHSYVE--------ENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVS 325
I Y + + F E L S N + + + G++ A +F +M ++N +S
Sbjct: 245 MITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQN-GDLRRARKLFNEMPKKNVIS 303
Query: 326 WTSMITGFAKQGYAQEALL----------------TFLGVLSACSHGGFVDEGRQFFECM 369
WT+MITG ++G ++EAL TF+ VL ACS+ + EG+Q + +
Sbjct: 304 WTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQII 363
Query: 370 NQ 371
++
Sbjct: 364 SK 365
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 129/277 (46%), Gaps = 30/277 (10%)
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM-PHRNVVSWTTMISGCAQNGK 233
AR LFD+M V++W +++ GY+K G I+ A ++FD + +NVV+WT M+ G ++ K
Sbjct: 71 ARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYIRSNK 130
Query: 234 SRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVS 293
A LFNEM V V+ + A+ G + ++ + E V
Sbjct: 131 ISDAEKLFNEMPNKNV----VSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSW------ 180
Query: 294 LNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFL------ 347
N ++ M A CG IEEA +F +M R+ +SWT+MI G +K G EA L F
Sbjct: 181 --NTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDRMPERN 238
Query: 348 -----GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
+++ + +DE FE M + + + M+ + G + A L
Sbjct: 239 VVSWNAMITGYAQNLRLDEALDLFERMPER-----DLPSWNTMITGLIQNGDLRRARKLF 293
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
MP K N +++ GC +E A ++ ++++
Sbjct: 294 NEMP-KKNVISWTTMITGCVQEGESEEALKIFSRMLS 329
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEK--TENPSTAIWNQMIRGHAR 95
Q+H I + ++++ L+ Y G L A K+F+ T WN +I +A
Sbjct: 358 QVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAH 417
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
++++ +K+M +PD+ TY LLS C+ GL EG
Sbjct: 418 HGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEG 459
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 179/547 (32%), Positives = 283/547 (51%), Gaps = 84/547 (15%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPS----TAI-------- 85
QIH Q++ GF Y+ L++ YV + L +A+KVF+++ + TA+
Sbjct: 85 QIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRG 144
Query: 86 -------------------WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLS 126
WN MI G+A + ++++ L+++M+ PDE TY +LS
Sbjct: 145 DIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLS 204
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARS 186
CA G G QVH V G+ SN+ I L++LY
Sbjct: 205 ACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLY----------------------- 241
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
K G+++ A +F + +++V+SW T+I G ++AL LF EM R
Sbjct: 242 -----------SKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 290
Query: 247 ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCG 306
+ + V +++ L ACA +G + +G+WIH Y+++ SL +LI MYA CG
Sbjct: 291 SGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNAS--SLRTSLIDMYAKCG 348
Query: 307 EIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLS 351
+IE A+ VF M ++ SW +MI GFA G A + +TF+G+LS
Sbjct: 349 DIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLS 408
Query: 352 ACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPND 411
ACSH G +D GR F M Q++ + P++EHYGCM+DL +GL EA ++ M M+P+
Sbjct: 409 ACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDG 468
Query: 412 AVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQ 471
+ SLL C++H N ELA AQ L+ +I+PE + Y+ L++N+YA+A RW+DVA +R
Sbjct: 469 VIWCSLLKACKMHGNVELAESFAQNLI-KIEPENPSSYI-LLSNIYASAGRWEDVARIRA 526
Query: 472 KMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISE 531
+ ++K PG S ++++ V+ +FV GD + Q IY L E+ + + G+ PD SE
Sbjct: 527 LLNGKCMKKVPGCSSIEVDSVVFEFVVGDKFHPQNREIYGMLEEMEVLLEEAGFVPDTSE 586
Query: 532 LFLGIEE 538
+ +EE
Sbjct: 587 VLQEMEE 593
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/383 (34%), Positives = 216/383 (56%), Gaps = 24/383 (6%)
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
A VFE + P+ IWN MIRGHA S P S+ LY M+ P+ YT+ FLL CA+
Sbjct: 17 ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76
Query: 131 CGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSW 190
F EG+Q+HG+VL G+ ++++ T+L+++Y+ + + A +FD R VVS+
Sbjct: 77 SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNW---RLEDAYKVFDRSSHRDVVSY 133
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG 250
+L+ GY RGDI A K+FDE+P ++VVSW MISG A+ G ++AL LF EM + V
Sbjct: 134 TALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVR 193
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEE 310
D+ V LSACA G ++LG+ +HS+V+++ G + L + NALI +Y+ CGE+E
Sbjct: 194 PDESTYVTVLSACAHSGSIELGRQVHSWVDDH---GFDSNL-KIVNALIDLYSKCGEVET 249
Query: 311 AYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF---------------LGVLSACSH 355
A G+F+ + ++ +SW ++I G+ +EALL F L VL AC+H
Sbjct: 250 ACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAH 309
Query: 356 GGFVDEGRQFFECMNQNW-GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL 414
G +D GR +++ G+ ++D++++ G ++ A + +M K +
Sbjct: 310 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSS-W 368
Query: 415 GSLLLGCRIHNNAELASQVAQKL 437
+++ G +H A+ + + ++
Sbjct: 369 NAMIFGFAMHGRADASFDLFSRM 391
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 172/510 (33%), Positives = 271/510 (53%), Gaps = 55/510 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H+ + GF ++ + +L Y G + +A KVF+ ++ ++ WN MI+G+A +
Sbjct: 348 EVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENG 407
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ L+K+M+ + + + + L C G EG +VH ++ G SNV
Sbjct: 408 DATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNV---- 463
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
N+MN +L+ Y K D A ++FDE+ ++
Sbjct: 464 NVMN------------------------------ALITMYCKCKRTDLAAQVFDELGYKT 493
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VSW MI GC QNG S A+ LF+ M+ V D LV+ + A A+I D +WIH
Sbjct: 494 RVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHG 553
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y + ++ V + ALI MYA CG + A +F + R+ ++W +MI G+ G
Sbjct: 554 Y-SIRLHLDQD---VYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHG 609
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+ A+ TFL VLSACSH G VDEG+++F M +++G++P +EHY
Sbjct: 610 SGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHY 669
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
G MVDL RAG + EA+S +Q MPM+P +V G++L C++H N ELA + AQ++ E++
Sbjct: 670 GTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIF-ELE 728
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
PE+ Y L+AN+YA A W+DVA VR M K G++K PG S VQ+ +H F +G +
Sbjct: 729 PEEGV-YHVLLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTN 787
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISEL 532
++QA IY L ++ + GY PD +
Sbjct: 788 HQQAKDIYARLAKLIEEIKAVGYVPDTDSI 817
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 153/340 (45%), Gaps = 41/340 (12%)
Query: 10 NPATSSKAL--TTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY 67
+PA+ S + T + L R T +H+Q+ G S + L Y
Sbjct: 216 SPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRR 275
Query: 68 LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETE-PDEYTYSFLLS 126
+A +VF++ WN ++ G+AR+ E +V + +M +++ E PD T +L
Sbjct: 276 PGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLP 335
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARS 186
CA +VH + G+ V + T ++++Y
Sbjct: 336 ACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVY----------------------- 372
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
K G +D A K+FD M RN VSW MI G A+NG + +AL+LF M
Sbjct: 373 -----------CKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVG 421
Query: 247 ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCG 306
V + V+++AAL AC E+G L G+ +H + +G E V++ NALI MY C
Sbjct: 422 EGVDVTDVSVLAALHACGELGFLDEGRRVHELL---VRIGLESN-VNVMNALITMYCKCK 477
Query: 307 EIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
+ A VF ++ + VSW +MI G + G +++A+ F
Sbjct: 478 RTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLF 517
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 154/347 (44%), Gaps = 59/347 (17%)
Query: 116 PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCA 175
P T++ LL +CA G VH ++ A G T L N+Y C
Sbjct: 223 PVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMY--------AKCR 274
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
R GD A ++FD MP R+ V+W +++G A+NG +
Sbjct: 275 R-----------------------PGD---ARRVFDRMPARDRVAWNALVAGYARNGLAE 308
Query: 236 QALSLFNEMRRAR-VGLDQVALVAALSACAEIGDLKLGKWIHSY-VEENFSVGREPVLVS 293
A+ + M+ D V LV+ L ACA+ L + +H++ V F V+
Sbjct: 309 AAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQ-----VN 363
Query: 294 LNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF------- 346
++ A++ +Y CG ++ A VF MQ RN+VSW +MI G+A+ G A EAL F
Sbjct: 364 VSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEG 423
Query: 347 --------LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEA 398
L L AC GF+DEGR+ E + + G++ + ++ ++ + D A
Sbjct: 424 VDVTDVSVLAALHACGELGFLDEGRRVHELLVR-IGLESNVNVMNALITMYCKCKRTDLA 482
Query: 399 FSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE-IDPE 444
+ + K +++LGC + ++E A ++ ++ E + P+
Sbjct: 483 AQVFDELGYKTR-VSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPD 528
>gi|15228028|ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g42920, chloroplastic; Flags: Precursor
gi|4512663|gb|AAD21717.1| hypothetical protein [Arabidopsis thaliana]
gi|20197867|gb|AAM15291.1| hypothetical protein [Arabidopsis thaliana]
gi|110738441|dbj|BAF01146.1| hypothetical protein [Arabidopsis thaliana]
gi|330255093|gb|AEC10187.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 177/526 (33%), Positives = 289/526 (54%), Gaps = 30/526 (5%)
Query: 7 IPANPATSSKALTTRQIFSLLQIR-NTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS 65
+PA P SS +L+ L+ + +T + L QIH+ +I G +++LAF S
Sbjct: 13 VPAMP--SSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCAS 70
Query: 66 GYLIN-AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMI--DKETEPDEYTYS 122
+N A+ VF + + + +WN +IRG +RS PE ++ ++ M+ +P TY
Sbjct: 71 PSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYP 130
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDM 182
+ R G R+G Q+HG V+ G + FIR ++++Y+ G C + R+ F M
Sbjct: 131 SVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCG--CLIEAWRI-FLGM 187
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
VV+WNS++ G+ K G ID A +FDEMP RN VSW +MISG +NG+ + AL +F
Sbjct: 188 IGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFR 247
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMY 302
EM+ V D +V+ L+ACA +G + G+WIH Y+ N R + + ALI MY
Sbjct: 248 EMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRN----RFELNSIVVTALIDMY 303
Query: 303 ASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFL 347
CG IEE VF ++ W SMI G A G+ + A+ ++F+
Sbjct: 304 CKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFI 363
Query: 348 GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM 407
GVL+AC+H G V +FF M + + I+P I+HY MV++ AGL++EA +L++NMP+
Sbjct: 364 GVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPV 423
Query: 408 KPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVA 467
+ + + SLL CR N E+A + A K + ++DP++ GY+ L++N YA+ +++
Sbjct: 424 EEDTVIWSSLLSACRKIGNVEMAKRAA-KCLKKLDPDETCGYV-LLSNAYASYGLFEEAV 481
Query: 468 AVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTL 513
R M + + K G S ++++ +H+F++ T+ +++ IY L
Sbjct: 482 EQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLL 527
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 171/497 (34%), Positives = 277/497 (55%), Gaps = 34/497 (6%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
L+A YV + A K+F K WN M+ G+AR ++ +++ D D
Sbjct: 268 LMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEA----RRLFDVAPIRD 323
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
+T++ ++S A+ G+ E + RV + N +M Y+ + A+
Sbjct: 324 VFTWTAIVSGYAQNGMLEEAK----RVFDAMPDKNAVSWNAMMAAYVQRRM---MEEAKE 376
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
LFD MP R+V SWN++L GY + G +D A IF MP ++ VSW M++ +Q G S +
Sbjct: 377 LFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEET 436
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS-YVEENFSVGREPVLVSLNN 296
L LF EM R +++ A LS CA+I L+ G +HS ++ + VG + N
Sbjct: 437 LQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVG-----CFVGN 491
Query: 297 ALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------- 343
AL+ MY CG +EEA+ F +M+ R+ VSW +MI G+A+ G+ +EAL
Sbjct: 492 ALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKP 551
Query: 344 --LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
+T +GVL+ACSH G V++G +F M++++G+ + EHY CM+DL RAG +DEA +L
Sbjct: 552 DDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNL 611
Query: 402 VQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAK 461
+++MP +P+ + G+LL RIH N+EL A+K+ E++PE A Y+ L++N+YA++
Sbjct: 612 MKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIF-ELEPENAGMYV-LLSNIYASSG 669
Query: 462 RWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAM 521
+W+DV +R M + GV+K PG SW+++ +H F GDS + + IY L ++ ++
Sbjct: 670 KWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMK 729
Query: 522 QEGYKPDISELFLGIEE 538
+ GY + +EE
Sbjct: 730 KAGYVSATDMVLHDVEE 746
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 163/355 (45%), Gaps = 61/355 (17%)
Query: 57 KLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEP 116
+ + ++ +G + +A ++F ST+ +N M+ G+A + +++ ++ + P
Sbjct: 112 RAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSI----PRP 167
Query: 117 DEYTYSFLL-------SVCARCGLFRE---GEQVHGRVLASGYCSNVFIR---------- 156
D ++Y+ LL S+ LF E + V V+ S + ++ +
Sbjct: 168 DSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAP 227
Query: 157 -------TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKI 209
++ Y+ +G + AR LFD +SWN+L+ GYV+R I+ A K+
Sbjct: 228 EKDAVSWNGMLAAYVRNGR---IQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKM 284
Query: 210 FDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN--EMRRARVGLDQVALVAALSACAEIG 267
F++MP R+VVSW TM+SG A+ G +A LF+ +R D A +S A+ G
Sbjct: 285 FNKMPQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIR------DVFTWTAIVSGYAQNG 338
Query: 268 DLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
L+ K + + + +V NA++ Y +EEA +F M RN SW
Sbjct: 339 MLEEAKRVFDAMPDKNAVSW--------NAMMAAYVQRRMMEEAKELFDAMPCRNVASWN 390
Query: 328 SMITGFAKQGYAQEALLTF-----------LGVLSACSHGGFVDEGRQFFECMNQ 371
+M+TG+A+ G EA F +L+A S GF +E Q F+ M +
Sbjct: 391 TMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGR 445
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 126/300 (42%), Gaps = 46/300 (15%)
Query: 155 IRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP 214
IR N M G V A LF MP RS ++N++L GY G + A F +P
Sbjct: 108 IRRNRAITAHMRAGR--VPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIP 165
Query: 215 HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKW 274
+ S+ T++ + +LF+EM D V+ +S+ A G + L +
Sbjct: 166 RPDSFSYNTLLHALGVSSSLADVRALFDEMPVK----DSVSYNVMISSHANHGLVSLARH 221
Query: 275 IHSYVEENFSVGREPVLVSLN-----------------------NALIHMYASCGEIEEA 311
E +V +L + NAL+ Y +IEEA
Sbjct: 222 YFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEA 281
Query: 312 YGVFRKMQRRNTVSWTSMITGFAKQGYAQEA-----------LLTFLGVLSACSHGGFVD 360
+F KM +R+ VSW +M++G+A++G EA + T+ ++S + G ++
Sbjct: 282 QKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLE 341
Query: 361 EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
E ++ F+ M + + M+ + + +M+EA L MP + N A ++L G
Sbjct: 342 EAKRVFDAMPDKNAVS-----WNAMMAAYVQRRMMEEAKELFDAMPCR-NVASWNTMLTG 395
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
Q+HS++I G+ ++ LLA Y G + AH FE+ E WN MI G+AR
Sbjct: 472 MQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARH 531
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
++++ ++ M T+PD+ T +L+ C+ GL +G
Sbjct: 532 GFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKG 572
>gi|357154895|ref|XP_003576937.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 661
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 169/488 (34%), Positives = 274/488 (56%), Gaps = 28/488 (5%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMI-DKETEP 116
L+ FY L +A +F++ + W ++ G+AR +++ ++ +M+ +P
Sbjct: 182 LVHFYANHRSLAHARNLFDEMPDRDVVSWTTLVDGYARRGLADEAWRVFCRMVVAGGLQP 241
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGC-A 175
+E T ++S + GL G V+ V G +V + L++++ G+ G A
Sbjct: 242 NEVTLVAVVSAMGQMGLLAFGRMVYRYVADGGVGRSVNLENALIDMF----GKFGCAASA 297
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
R +FD M + V SW +++ Y K GD++ A ++FD+MP RN VSW+ MI+ +Q +
Sbjct: 298 REVFDSMAVKDVYSWTTMVNAYAKCGDLESAARLFDDMPRRNAVSWSCMIAAYSQANQPE 357
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL-VSL 294
+A+ LF M V LV+ LSACA++G L LG+WI+ +N+ + + VL V+L
Sbjct: 358 EAVRLFKAMIEEGVEPINAGLVSVLSACAQLGCLDLGRWIY----DNYVISGKAVLTVNL 413
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------- 343
NA I +YA CG+ + A +F +M RN VSW SMI A G ++E L
Sbjct: 414 GNAFIDVYAKCGDFDAASKLFAEMAERNVVSWNSMIMAHAVHGQSEEVLRLFEQLKGTCI 473
Query: 344 ----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAF 399
+TFLG+LSACSH G V EGR++F+ M +GI+P+ EHY CM+DL + GL++EAF
Sbjct: 474 VPDEITFLGLLSACSHSGLVSEGRRYFKEMKLIYGIEPKSEHYACMIDLLGKIGLLEEAF 533
Query: 400 SLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAA 459
+ + MPM+ ++A G+LL CR++ N E+ A KLV +++P + Y+ L++ +YA+
Sbjct: 534 EVAKGMPMETDEAGWGALLNACRMYGNVEIGEFAADKLV-QLNPLDSGIYV-LMSQIYAS 591
Query: 460 AKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
+W V +R M + GV+K PG S ++++G H+F+ D ++ + IY L I
Sbjct: 592 KNKWDQVKILRVLMRERGVKKNPGCSSIEVDGKFHEFLVADVSHVHSEDIYAALKNIYFH 651
Query: 520 AMQEGYKP 527
EGY P
Sbjct: 652 LKWEGYVP 659
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 119/481 (24%), Positives = 208/481 (43%), Gaps = 98/481 (20%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV--TSGYLIN 70
T+ + T + +LL+ + Q+H+ + ++G + + ++LLAF T + +
Sbjct: 30 TNRNLVVTHPLLALLESCASFPRFLQLHALLTVSGLAAHRFPASRLLAFCALSTPPRVDH 89
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
A + + P+ + M+R R+ P ++ L++++I + D T F + A
Sbjct: 90 AAAILARASAPNAYMLATMMRAFLRARLPSRASALFRRVIRESLPADARTLVFAIKAAAS 149
Query: 131 CGLFRE---GEQVHGRVLASGYCS-NVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARS 186
GE VH L G+ + +V + L++ Y + AR LFD+MP R
Sbjct: 150 EHEHHSPSGGEGVHCVALKWGHVAQSVLVGNALVHFY---ANHRSLAHARNLFDEMPDRD 206
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
VVSW +L+ GY +RG D AW++F M +++G Q
Sbjct: 207 VVSWTTLVDGYARRGLADEAWRVFCRM----------VVAGGLQP--------------- 241
Query: 247 ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHM----- 301
++V LVA +SA ++G L G+ ++ YV + VGR V+L NALI M
Sbjct: 242 -----NEVTLVAVVSAMGQMGLLAFGRMVYRYVADG-GVGRS---VNLENALIDMFGKFG 292
Query: 302 --------------------------YASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
YA CG++E A +F M RRN VSW+ MI +++
Sbjct: 293 CAASAREVFDSMAVKDVYSWTTMVNAYAKCGDLESAARLFDDMPRRNAVSWSCMIAAYSQ 352
Query: 336 QGYAQEALLTF---------------LGVLSACSHGGFVDEGRQFFECMNQNWGIKPR-- 378
+EA+ F + VLSAC+ G +D GR ++ N+ I +
Sbjct: 353 ANQPEEAVRLFKAMIEEGVEPINAGLVSVLSACAQLGCLDLGRWIYD----NYVISGKAV 408
Query: 379 --IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQK 436
+ +D++++ G D A L M + N S+++ +H +E ++ ++
Sbjct: 409 LTVNLGNAFIDVYAKCGDFDAASKLFAEMAER-NVVSWNSMIMAHAVHGQSEEVLRLFEQ 467
Query: 437 L 437
L
Sbjct: 468 L 468
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 167/496 (33%), Positives = 265/496 (53%), Gaps = 53/496 (10%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
L+ Y + GY+ NA K+F++ WN MI G+A + ++++ L+K M+ PD
Sbjct: 163 LIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 222
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
E T ++S CA+ G G QVH + G+ SN+ I L++LY
Sbjct: 223 ESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLY-------------- 268
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
K G+++ A +F+ +P+++V+SW T+I G ++A
Sbjct: 269 --------------------SKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEA 308
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
L LF EM R+ + V +++ L ACA +G + +G+WIH Y+++ SL +
Sbjct: 309 LLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANAS--SLRTS 366
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------------- 343
LI MYA CG+IE A+ VF + ++ SW +MI GFA G A +
Sbjct: 367 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPD 426
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
+TF+G+LSACSH G +D GR F M Q++ + P++EHYGCM+DL +GL EA ++
Sbjct: 427 DITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMI 486
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKR 462
M M+P+ + SLL C++H N EL AQ L+ +I+PE Y+ L++N+YA A R
Sbjct: 487 NTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLI-KIEPENPGSYV-LLSNIYATAGR 544
Query: 463 WQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQ 522
W +VA R + G++K PG S ++I+ V+H+F+ GD + + IY L E+ + +
Sbjct: 545 WNEVANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEE 604
Query: 523 EGYKPDISELFLGIEE 538
G+ PD SE+ +EE
Sbjct: 605 AGFVPDTSEVLQEMEE 620
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 146/432 (33%), Positives = 244/432 (56%), Gaps = 28/432 (6%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY---LINAHKVFEKTENPSTAIWNQMI 90
++L IH+Q+I G NY L+KL+ F + S + L A VFE + P+ IWN M
Sbjct: 4 QSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMF 63
Query: 91 RGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYC 150
RGHA S P ++ LY MI P+ YT+ FLL CA+ F+EG+Q+HG VL G
Sbjct: 64 RGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCD 123
Query: 151 SNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIF 210
++++ T+L+++Y+ +G + A +FD+ P R VVS+ +L+KGY RG I+ A K+F
Sbjct: 124 LDLYVHTSLISMYVQNGR---LEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMF 180
Query: 211 DEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLK 270
DE+P ++VVSW MISG A+ G ++AL LF +M + V D+ +V +SACA+ G ++
Sbjct: 181 DEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIE 240
Query: 271 LGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMI 330
LG+ +HS+++++ G +V NALI +Y+ CGE+E A G+F + ++ +SW ++I
Sbjct: 241 LGRQVHSWIDDH-GFGSNLKIV---NALIDLYSKCGELETACGLFEGLPYKDVISWNTLI 296
Query: 331 TGFAKQGYAQEALLTF---------------LGVLSACSHGGFVDEGRQFFECMNQNW-G 374
G+ +EALL F L +L AC+H G +D GR +++ G
Sbjct: 297 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKG 356
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVA 434
+ ++D++++ G + EA V N + + + +++ G +H A+ + +
Sbjct: 357 VANASSLRTSLIDMYAKCGDI-EAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIF 415
Query: 435 QKLVAE-IDPEQ 445
++ I+P+
Sbjct: 416 SRMRKNGIEPDD 427
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 159/446 (35%), Positives = 256/446 (57%), Gaps = 53/446 (11%)
Query: 109 MIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMS-G 167
M++++ P+++TY F+L CA G G+ VHG V+ G+ V ++ L+++Y G
Sbjct: 1 MLERKKLPNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRG 60
Query: 168 GECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISG 227
GE G+ AR K+FDEM + VSW+ MI G
Sbjct: 61 GEGGIEFAR-------------------------------KVFDEMYKSDSVSWSAMIGG 89
Query: 228 CAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGR 287
+ G+S A++LF EM+ V D++ +V+ LSAC +G L+LGKW+ SYVE+ R
Sbjct: 90 YVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGLGALELGKWVESYVEKE----R 145
Query: 288 EPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---- 343
V L+NALI M+A CG++++A +FR M+ RN VSWTS+I G A G EA+
Sbjct: 146 VQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVIGGLAMHGRGVEAVAVFE 205
Query: 344 -----------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRA 392
+ F+G+LSACSH G VD+G+++F+ M +++ I P+IEHYGCMVD+ RA
Sbjct: 206 EMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCRA 265
Query: 393 GLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLAL 452
GL+ EA VQ MP+ PN V +L+ CR H +L ++ ++L+ +P + Y+ L
Sbjct: 266 GLVKEALKFVQEMPIDPNPVVWRTLINACRAHGELKLGEKITRQLIRN-EPMHESNYV-L 323
Query: 453 VANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKT 512
++N+YA W+ +R+ M G++K PG + ++++ +++FVAGD ++ Q+ IY+
Sbjct: 324 LSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTMIELDNEIYEFVAGDKSHAQSKEIYEM 383
Query: 513 LGEITMQAMQEGYKPDISELFLGIEE 538
+ E+ + + GY P +E+ L I++
Sbjct: 384 VDEMGKEMKRAGYMPTTTEVLLDIDD 409
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 129/304 (42%), Gaps = 42/304 (13%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVT----SGYLINAHKVFEKTENPSTAIWNQMIRGHA 94
+H ++ GF + + L+ Y G + A KVF++ + W+ MI G+
Sbjct: 32 VHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEFARKVFDEMYKSDSVSWSAMIGGYV 91
Query: 95 RSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVF 154
R ++ L+++M K PDE T +LS C G G+ V V NV
Sbjct: 92 RVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGLGALELGKWVESYVEKERVQKNVE 151
Query: 155 IRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP 214
+ N+L+ + K GD+D A +F M
Sbjct: 152 LS----------------------------------NALIDMFAKCGDVDKATNLFRSMR 177
Query: 215 HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKW 274
RN+VSWT++I G A +G+ +A+++F EM R+ V D V + LSAC+ G + GK
Sbjct: 178 ERNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKR 237
Query: 275 IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGF 333
+ ++FS+ + + ++ M G ++EA ++M N V W ++I
Sbjct: 238 YFDSMRKDFSIVPK---IEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINAC 294
Query: 334 AKQG 337
G
Sbjct: 295 RAHG 298
>gi|224131262|ref|XP_002328495.1| predicted protein [Populus trichocarpa]
gi|222838210|gb|EEE76575.1| predicted protein [Populus trichocarpa]
Length = 580
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 173/508 (34%), Positives = 282/508 (55%), Gaps = 28/508 (5%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAH 72
+S + + + LLQ N + QIH Q I+ G Y+ L+ Y+ +G + AH
Sbjct: 59 SSGECPDKQTLLYLLQAVNFISQVKQIHCQAIVTGLFSFGYLQNTLIKVYLENGLVRLAH 118
Query: 73 KVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCG 132
+VFEK +P +N MI G+A+ +++ L+ +M+ EPDE+T LL C + G
Sbjct: 119 QVFEKMPSPDIVSFNVMIVGYAKKGFGLEAMRLFHEMVGLGLEPDEFTILGLLVSCGQLG 178
Query: 133 LFREGEQVHGRV--LASGYCSNVFIRTNLMNLYLMSGGEC-GVGCARLLFDDMPARSVVS 189
+ G+ VHG + SN+ + L+++Y+ +C V A F + + +VS
Sbjct: 179 NVKFGKAVHGWMERRKPTISSNLILGNALLDMYV----KCQKVELALRTFGALKEKDIVS 234
Query: 190 WNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARV 249
WN ++ G K G+++ A F +MP R++VSW ++++G A G L +M +V
Sbjct: 235 WNMIVAGCAKVGELEQARLFFYQMPCRDIVSWNSLVTGYACRGDFASVKELIVDMVMEKV 294
Query: 250 GLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIE 309
D V +++ +SA E G L G+W H +V + + L +ALI MY CG IE
Sbjct: 295 IPDTVTMISLVSAATESGALDQGRWAHGWVIRM----QIKLDAFLGSALIDMYCKCGSIE 350
Query: 310 EAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------------LTFLGVLSACSH 355
A VF+++ +++ WT+MITG A GY +AL +TF+ VLSACSH
Sbjct: 351 RASRVFKEINKKDVTVWTTMITGLAFHGYGSKALELFSEMQEDVSPDDVTFVSVLSACSH 410
Query: 356 GGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLG 415
G VD+G + F M ++GI+P +EHYGC+VDL +R+G + EA ++ MPMKP+ ++ G
Sbjct: 411 SGLVDQGIKVFSSMT-DYGIEPGVEHYGCLVDLLARSGRLSEAKDIIDQMPMKPSRSIWG 469
Query: 416 SLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIK 475
++L C+ + ELA ++A + + +DPE+ GY L++N+YAA+ RW +R+ M
Sbjct: 470 AMLNACQAQGDVELA-EIASRELLNLDPEEEGGY-TLLSNIYAASGRWSYSKKIRETMES 527
Query: 476 MGVRKPPGQSWVQINGVLHDFVAGDSTY 503
GV+K G S V ++GV+H+F++ D +
Sbjct: 528 RGVKKTAGCSSVVVDGVVHNFISADKCH 555
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 183/423 (43%), Gaps = 102/423 (24%)
Query: 78 TENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
T NP+ I+N +I + + E S YLY ++ PD+ T +LL +
Sbjct: 27 TPNPNLFIYNTLISAFSSLKKIE-SFYLYNVLLSSGECPDKQTLLYLLQA---VNFISQV 82
Query: 138 EQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGY 197
+Q+H + + +G S +++ L+ +YL +G V A +F+ MP+ +VS+N ++ GY
Sbjct: 83 KQIHCQAIVTGLFSFGYLQNTLIKVYLENG---LVRLAHQVFEKMPSPDIVSFNVMIVGY 139
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
K+ G +A+ LF+EM + D+ ++
Sbjct: 140 AKK-------------------------------GFGLEAMRLFHEMVGLGLEPDEFTIL 168
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVS---LNNALIHMYASC--------- 305
L +C ++G++K GK +H ++E R+P + S L NAL+ MY C
Sbjct: 169 GLLVSCGQLGNVKFGKAVHGWMER-----RKPTISSNLILGNALLDMYVKCQKVELALRT 223
Query: 306 ----------------------GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG---YAQ 340
GE+E+A F +M R+ VSW S++TG+A +G +
Sbjct: 224 FGALKEKDIVSWNMIVAGCAKVGELEQARLFFYQMPCRDIVSWNSLVTGYACRGDFASVK 283
Query: 341 EAL------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG----C 384
E + +T + ++SA + G +D+GR W I+ +I+
Sbjct: 284 ELIVDMVMEKVIPDTVTMISLVSAATESGALDQGR-----WAHGWVIRMQIKLDAFLGSA 338
Query: 385 MVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPE 444
++D++ + G ++ A + + + K + V +++ G H A ++ ++ ++ P+
Sbjct: 339 LIDMYCKCGSIERASRVFKEIN-KKDVTVWTTMITGLAFHGYGSKALELFSEMQEDVSPD 397
Query: 445 QAA 447
Sbjct: 398 DVT 400
>gi|413924390|gb|AFW64322.1| hypothetical protein ZEAMMB73_176484 [Zea mays]
Length = 496
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 167/418 (39%), Positives = 241/418 (57%), Gaps = 29/418 (6%)
Query: 116 PDEYTYSFLLSVCARCGLFREGE----QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG 171
P++ T +LS CA +H R L + S++ + T L YL S
Sbjct: 67 PNDVTLLTVLSACADSPSSPLASPLALTLHARALKL-FPSHLLLSTCLARFYLASRLP-- 123
Query: 172 VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQN 231
A LFD MP RSVV++N+++ G ++ G +D A+++FD MP + VSWT +I G +N
Sbjct: 124 -HLALQLFDSMPVRSVVTYNTMISGLMRNGLVDAAFEVFDGMPGPDKVSWTALIDGFVKN 182
Query: 232 GKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL 291
G+ +A+ F M V D + LVA +SACAE+G L LG W+H V R
Sbjct: 183 GRHDEAIDCFRAMLLDGVETDYITLVAVVSACAEVGALGLGMWVHRLVLRQ----RLERN 238
Query: 292 VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------- 343
V + N+LI MYA CG++ A VFR +++R VSW SMI GFA G +A+
Sbjct: 239 VRVANSLIDMYARCGQVNLAAQVFRSIRKRTVVSWNSMIVGFAANGRCTDAIELFEEMRR 298
Query: 344 -------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMD 396
+T GVL+ACSH G + G ++++ M +G+ R+EHYGC+VDL RAG +D
Sbjct: 299 QGFKPDAVTLTGVLTACSHAGLTEHGLRYYDLMTTEYGVAARMEHYGCVVDLLGRAGRLD 358
Query: 397 EAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANV 456
EA +V+ MPM+PN+ VLG+LL GCR H N ++A Q+ Q L E+DP+ A Y+ L++N+
Sbjct: 359 EAMHVVETMPMRPNEVVLGALLAGCRTHGNLDMAEQMMQHLF-ELDPQGDANYV-LLSNI 416
Query: 457 YAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLG 514
YAA +W VR M GV+K PG S V+I+G +H+FV+GD ++ A I + LG
Sbjct: 417 YAAVGKWDGAGKVRSLMKARGVKKRPGHSTVEIDGDVHEFVSGDQSHPLAGEIGQMLG 474
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 103/247 (41%), Gaps = 37/247 (14%)
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEM------PHRNVVSWTTMISGCAQNGKSRQAL 238
R VVSW S + ++GD+ A M P N V+ T++S CA + S A
Sbjct: 30 RDVVSWTSTISRAARQGDLHAAAASLCAMVSSPAAPAPNDVTLLTVLSACADSPSSPLAS 89
Query: 239 SLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL-VSLNNA 297
L + + L L+ LS C + L + + F PV V N
Sbjct: 90 PLALTLHARALKLFPSHLL--LSTC--LARFYLASRLPHLALQLFD--SMPVRSVVTYNT 143
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------------- 343
+I G ++ A+ VF M + VSWT++I GF K G EA+
Sbjct: 144 MISGLMRNGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAMLLDGVETD 203
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH----YGCMVDLFSRAGLMDEA 398
+T + V+SAC+ G + G + ++ R+E ++D+++R G ++ A
Sbjct: 204 YITLVAVVSACAEVGALGLGMWVHRLV-----LRQRLERNVRVANSLIDMYARCGQVNLA 258
Query: 399 FSLVQNM 405
+ +++
Sbjct: 259 AQVFRSI 265
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 44/99 (44%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H ++ + + L+ Y G + A +VF + WN MI G A +
Sbjct: 226 VHRLVLRQRLERNVRVANSLIDMYARCGQVNLAAQVFRSIRKRTVVSWNSMIVGFAANGR 285
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
++ L+++M + +PD T + +L+ C+ GL G
Sbjct: 286 CTDAIELFEEMRRQGFKPDAVTLTGVLTACSHAGLTEHG 324
>gi|357441857|ref|XP_003591206.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480254|gb|AES61457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 490
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 165/484 (34%), Positives = 262/484 (54%), Gaps = 26/484 (5%)
Query: 22 QIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENP 81
+I LL T L QIH+ + +G N IL+ ++ + + A +F T +P
Sbjct: 11 KILHLLHNTKTQTHLPQIHAHFLRHGLHHSNQILSHFVSVCTSLHQIPYATTIFNHTHHP 70
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQM-IDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
+ ++N +I+ H+ +S + + M + PD +T+ LL + + G+ +
Sbjct: 71 NILLFNSIIKAHSSFPPFHQSFHFFNLMKMTHNILPDNFTFPPLLKATSYLRDYDLGQCL 130
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVK 199
H V A G+ + + L+ +Y CG + A +FD+M R VV WN ++ G+ K
Sbjct: 131 HAHVTALGFYRHSPVEIGLLEVY----SNCGKMEDANKVFDEMLHREVVVWNIMINGFCK 186
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
GD++ K+F M R+VVSW MIS AQ K +A +F EM D LV
Sbjct: 187 MGDLEIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATLVTV 246
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
L CA +GD+ G+WIHSY + G ++S+ N+L+ Y CG +E A+ VF +M
Sbjct: 247 LPVCARLGDVDAGEWIHSYADGK---GLLRKVISVGNSLVDFYCKCGNLEAAWKVFNEMT 303
Query: 320 RRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQ 364
++N VSW +MI+G G + + TF+GVL+ C+H GFVD+GR+
Sbjct: 304 KKNVVSWNAMISGLGLNGKGELGVELFEKMARKGVTPSDSTFVGVLACCAHAGFVDKGRE 363
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
F+ M + + P++EHYGC+VDL R G + EA+ L++NMP+ PN A+ G+LL CR H
Sbjct: 364 IFDSMTVKFKLSPKLEHYGCVVDLLGRCGHVKEAYDLIRNMPLMPNAALWGALLSACRTH 423
Query: 425 NNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQ 484
+ E+A A++LV ++P + Y+ L++NVYA ++W +V VR M +G++K PGQ
Sbjct: 424 GDREVAEIAAKELV-RLEPGNSGNYV-LLSNVYAEERKWNEVEKVRVLMQGVGIKKNPGQ 481
Query: 485 SWVQ 488
S +Q
Sbjct: 482 SALQ 485
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 185/553 (33%), Positives = 288/553 (52%), Gaps = 63/553 (11%)
Query: 11 PATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLIN 70
P T+ + + + I SLL +T T QIHS I+ G +L K F TS +
Sbjct: 113 PHTTKRRVAEQTILSLLTTCDTLTTFTQIHSLILKLGLHHNPLVLTK---FAATSSHFNA 169
Query: 71 AHKVF-------EKTENPS--TAIWNQMIRGHARS-ETPEKSVYLYKQMIDKETEPDEYT 120
H + T PS ++N +IR A++ + ++ Y M P+++T
Sbjct: 170 VHYASSVLFPNDQTTPPPSHDAFLFNTLIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFT 229
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFD 180
+ F+L CA G VH ++ G+ + +R L+++Y + G
Sbjct: 230 FPFVLKACAGMMRLELGGAVHASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPV----- 284
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSL 240
A K+FDE P ++ V+W+ MI G A+ G S +A++L
Sbjct: 285 ------------------------SAKKVFDESPVKDSVTWSAMIGGYARAGNSARAVTL 320
Query: 241 FNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIH 300
F EM+ V D++ +V+ LSACA++G L+LGKW+ SY+E ++ R V L NALI
Sbjct: 321 FREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERK-NIMRS---VELCNALID 376
Query: 301 MYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF-------------- 346
M+A CG+++ A VFR+M+ R VSWTSMI G A G EA+L F
Sbjct: 377 MFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVA 436
Query: 347 -LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
+GVLSACSH G VD+G +F M + I P+IEHYGCMVD+ SRAG ++EA V+ M
Sbjct: 437 FIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAM 496
Query: 406 PMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQD 465
P++PN + S++ C +L VA++L+ +P + Y+ L++N+YA RW+
Sbjct: 497 PVEPNQVIWRSIVTACHARGELKLGESVAKELIRR-EPSHESNYV-LLSNIYAKLLRWEK 554
Query: 466 VAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGY 525
VR+ M G+RK PG + +++N +++FVAGD ++ Q IY+ + E+ + + GY
Sbjct: 555 KTKVREMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQYKEIYEMVEEMGREIKRAGY 614
Query: 526 KPDISELFLGIEE 538
P S++ L I+E
Sbjct: 615 VPTTSQVLLDIDE 627
>gi|242079743|ref|XP_002444640.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
gi|241940990|gb|EES14135.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
Length = 690
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 187/603 (31%), Positives = 299/603 (49%), Gaps = 89/603 (14%)
Query: 12 ATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFY-----VTSG 66
A S + L + SL + + ++H+Q++ G + +KL+A Y V +
Sbjct: 96 APSQRRLVEEHLASLPHGLPRLRHVQELHAQVLRQGLHRDPRAASKLIASYALLRRVPAC 155
Query: 67 YLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLS 126
+ + + + N ++R +A + P ++ ++ M ++ D +TYSFL+
Sbjct: 156 RCVFSAAAAPPFAPSTALLANTLLRAYALNSLPHAALAVFVDMPLRQR--DTFTYSFLIK 213
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGG------------------ 168
A G+ H V G + F+ L++ Y + G
Sbjct: 214 ALATAGV-TPVRAAHTHVFKLGSVEDTFVGNALIDAYSKNDGLSDAKKVFDEMTTRDVVS 272
Query: 169 ----------ECGVGCARLLFDDMPARSVVSWNSLLKGYVK------------------- 199
+ V AR +FD+MP + VSWN++L GY K
Sbjct: 273 WNTAMAAMVRKGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEEAFELFQRMPGRNV 332
Query: 200 ------------RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRA 247
+GD++ A IFD+MP +N+V+WT M+S CAQ G +A LF EM+ A
Sbjct: 333 VSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVGEAGRLFTEMKEA 392
Query: 248 RVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGE 307
+ LD VA+V+ L+ACAE G L LGK IH +V + +GR ++ NAL+ M+ CG
Sbjct: 393 AIELDVVAVVSILAACAESGCLALGKRIHRHVRQR-KLGRSTLVC---NALMDMFCKCGC 448
Query: 308 IEEAYGVF-RKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLS 351
+ A +F ++ +++VSW +I GFA G+ ++AL +T + VLS
Sbjct: 449 VNRADYIFDTEIVEKDSVSWNIIIGGFAMHGHGEKALNLFTQMKQQGFHPDAVTLINVLS 508
Query: 352 ACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPND 411
AC+H G V+EGR+FF M ++GIKP IEHYGCMVDL R GL+ EA ++++MP +PN+
Sbjct: 509 ACTHMGLVEEGRRFFANMETDYGIKPEIEHYGCMVDLLGRGGLIKEAVDMIKSMPWEPNE 568
Query: 412 AVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQ 471
+ GSLL CR+H N E A A +L + + P A Y A+++N+YA A +W D+A R
Sbjct: 569 VIWGSLLSACRLHKNVEYAELAANEL-SNLQPSNAGNY-AVLSNIYAEAGKWSDMAKARV 626
Query: 472 KMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISE 531
+M G +K G SW++++ H+F GD + ++ I + ++ G P E
Sbjct: 627 QMKGTGSQKTAGSSWIELDEAFHEFTVGDRKHPESDQISDMIDRLSSHVKCVGCVPVGHE 686
Query: 532 LFL 534
L +
Sbjct: 687 LLV 689
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 182/552 (32%), Positives = 284/552 (51%), Gaps = 65/552 (11%)
Query: 9 ANPATSSKALTT--RQIFSLLQ---IRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV 63
+NP S LT SLLQ R K Q+H+Q+ + GF I KL+ Y
Sbjct: 62 SNPHAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYC 121
Query: 64 TSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSF 123
L +A +F++ + +WN +IRG+A + E +V LY QM D PD +T+ F
Sbjct: 122 VCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPF 181
Query: 124 LLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDM 182
+L CA G ++H V+ +G+ +VF+ L+++Y +CG VG AR +FD +
Sbjct: 182 VLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMY----AKCGCVGSAREVFDKI 237
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
R V WNS+L Y +QNG LSL +
Sbjct: 238 LVRDAVLWNSMLAAY-------------------------------SQNGHPDACLSLCS 266
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIH--SYVEENFSVGREPVLVSLNNALIH 300
EM + + LV A+SA A+ L G+ +H S+ +E S + + AL+
Sbjct: 267 EMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDK------VKTALVD 320
Query: 301 MYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------------LTF 346
MYA CG + A +F ++ + VSW +MITG+A G+A EAL +TF
Sbjct: 321 MYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVAKPDHITF 380
Query: 347 LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP 406
+GVLSACSHGG ++EG FFE M +++ I P ++HY CMVDL +G +DEA++L+ M
Sbjct: 381 VGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMK 440
Query: 407 MKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDV 466
+ P+ V G+LL C+IH N EL ++L+ E++P+ A Y+ L +N+YA A +W+ V
Sbjct: 441 VLPDSGVWGALLNSCKIHANVELGEIALERLI-ELEPDDAGNYVIL-SNIYAQAGKWEGV 498
Query: 467 AAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYK 526
A +R+ M ++K SW+++ +H F++GD+++ + IY L + + GY
Sbjct: 499 AKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYS 558
Query: 527 PDISELFLGIEE 538
P +F +E+
Sbjct: 559 PSTGSVFHDVED 570
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 184/528 (34%), Positives = 272/528 (51%), Gaps = 74/528 (14%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
H Q + GF ++ + L+ Y G L +A +F++ + W MI G+ ++E
Sbjct: 1165 HQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQA 1224
Query: 100 EKSVYLYKQMIDKETEP--------DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCS 151
+ ++ L+K +++ETE D +LS C+R E VHG V+ G+
Sbjct: 1225 DNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGF-- 1282
Query: 152 NVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFD 211
G GVG N+L+ Y K G + K+FD
Sbjct: 1283 ---------------DGSIGVG-----------------NTLMDAYAKCGQPLVSKKVFD 1310
Query: 212 EMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM-RRARVGLDQVALVAALSACAEIGDLK 270
M ++ +SW +MI+ AQ+G S +AL +F+ M R V + V L A L ACA G L+
Sbjct: 1311 WMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALR 1370
Query: 271 LGKWIHSYV-----EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVS 325
GK IH V E N VG ++I MY CG +E A F +M+ +N S
Sbjct: 1371 AGKCIHDQVIKMDLEYNVCVG---------TSIIDMYCKCGRVEMAKKTFDRMKEKNVKS 1421
Query: 326 WTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMN 370
WT+M+ G+ G A+EAL +TF+ VL+ACSH G V+EG +F M
Sbjct: 1422 WTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMK 1481
Query: 371 QNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELA 430
+ I+P IEHYGCMVDLF RAG ++EA++L++ M MKP+ V GSLL CRIH N +L
Sbjct: 1482 HKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLG 1541
Query: 431 SQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQIN 490
AQKL E+DP+ GY L++N+YA A RW DV +R M + KPPG S V++
Sbjct: 1542 EIAAQKLF-ELDPDN-CGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELK 1599
Query: 491 GVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
G +H F+ GD + +IYK L ++T++ + GY P+++ + ++E
Sbjct: 1600 GRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDVDE 1647
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/416 (35%), Positives = 228/416 (54%), Gaps = 28/416 (6%)
Query: 3 VEEIIPAN--PATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
++ P+ P T + ++ LLQ K L QIH++II +G S + KL+
Sbjct: 8 THDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIH 67
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y T G + A +F + +NP T WN +IR + + E+++ LYK M+ + D++T
Sbjct: 68 LYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFT 127
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLF 179
+ F++ C G+ VHG ++ G+ +VF++ NL++ Y +CG A +F
Sbjct: 128 FPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYF----KCGHTRFALKVF 183
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
+ M R+VVSW +++ G + GD+ A +IFDE+P +NVVSWT MI+G +N + +AL
Sbjct: 184 EKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALE 243
Query: 240 LFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEEN-FSVGREPVLVSLNNAL 298
LF M+ + ++ +V+ + AC E+G L LG+ IH Y +N +G V L AL
Sbjct: 244 LFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIG-----VYLGTAL 298
Query: 299 IHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------------- 343
I MY+ CG I++A VF M R++ +W SMIT G QEAL
Sbjct: 299 IDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDA 358
Query: 344 LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAF 399
+TF+GVL AC H V EG +F M Q++GI P EHY CM +L++R+ +DEAF
Sbjct: 359 ITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAF 414
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 187/436 (42%), Gaps = 85/436 (19%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H ++ GF + L+ Y G + + KVF+ E WN MI +A+S
Sbjct: 1273 VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGL 1332
Query: 99 PEKSVYLYKQMIDK-ETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ ++ M+ + T S +L CA G R G+ +H +V+ NV + T
Sbjct: 1333 SGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGT 1392
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
+++++Y +CG V A+ FD M ++V SW +++ GY
Sbjct: 1393 SIIDMYC----KCGRVEMAKKTFDRMKEKNVKSWTAMVAGY------------------- 1429
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
+G++++AL +F +M RA V + + V+ L+AC+ G ++ G
Sbjct: 1430 ------------GMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWF 1477
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR-NTVSWTSMITGFAK 335
+ ++ + + EP + ++ ++ G + EAY + ++M+ + + V W S+
Sbjct: 1478 NAMKHKYDI--EPG-IEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSL------ 1528
Query: 336 QGYAQEALLTFLGVLSACSHGGFVDEG----RQFFECMNQNWGIKPRIEHYGCMVDLFSR 391
L AC VD G ++ FE N G +Y + +L++
Sbjct: 1529 --------------LGACRIHKNVDLGEIAAQKLFELDPDNCG------YYVLLSNLYAD 1568
Query: 392 AGL---MDEAFSLVQNMPM-KPNDAVLGSL-------LLGCRIHNNAELASQVAQKLVAE 440
AG ++ L++N + KP L L L+G + H + E+ + +KL E
Sbjct: 1569 AGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLE 1628
Query: 441 IDPEQAAGYLALVANV 456
+ Q GY+ + +V
Sbjct: 1629 L---QKIGYVPNMTSV 1641
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 132/337 (39%), Gaps = 98/337 (29%)
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDM 182
FLL C F+ Q+H +++ SG ++ + L++LY G + A LLF +
Sbjct: 32 FLLQNCKN---FKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGR---IAYAILLFYQI 85
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
+WN +++ N + NG S QAL L+
Sbjct: 86 QNPCTFTWNLIIRA--------------------NTI-----------NGLSEQALMLYK 114
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIH-SYVEENFSVGREPVLVSLNNALIHM 301
M + D+ + AC + LGK +H S ++ FS V + N LI
Sbjct: 115 NMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGD-----VFVQNNLIDF 169
Query: 302 Y-------------------------------ASCGEIEEAYGVFRKMQRRNTVSWTSMI 330
Y SCG+++EA +F ++ +N VSWT+MI
Sbjct: 170 YFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMI 229
Query: 331 TGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGI 375
G+ + +EAL T + ++ AC+ G + GR ++ I
Sbjct: 230 NGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGI-----HDYAI 284
Query: 376 KPRIE---HYG-CMVDLFSRAGLMDEAFSLVQNMPMK 408
K IE + G ++D++S+ G + +A + + MP K
Sbjct: 285 KNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRK 321
>gi|297806919|ref|XP_002871343.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317180|gb|EFH47602.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 511
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 171/509 (33%), Positives = 281/509 (55%), Gaps = 31/509 (6%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H+ + G + +L +LL L+ A K+F+ NP ++N++I+ ++
Sbjct: 6 QLHAHCLRTGVDETKDLLQRLLLI----PNLVYARKLFDLHRNPCIFLYNKLIQSYSVHH 61
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
P +S+ LY + P+ +T++F+ + A R +H + SG+ S+ F T
Sbjct: 62 QPHESIVLYNLLSFDGIRPNHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCT 121
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+ Y G C CAR +FD+M R V WN+++ GY +RGD+ A ++FD MP++N
Sbjct: 122 ALITAYAKLGALC---CARRVFDEMSNRDVPVWNAMITGYQRRGDMKAAMELFDSMPNKN 178
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRAR-VGLDQVALVAALSACAEIGDLKLGKWIH 276
V SWTT+ISG +QNG +AL++F M + + V + + LV+ L ACA +G+L++G+ +
Sbjct: 179 VTSWTTVISGFSQNGNYSEALTMFLCMEKDKSVKPNHITLVSVLPACANLGELEIGRRLE 238
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAK 335
Y EN + + NA + MY+ CG I+ A +F ++ +RN +SW SMI A
Sbjct: 239 GYARENGFFDN----IYVRNATLEMYSKCGMIDVAKRLFDEIGNQRNLISWNSMIGSLAT 294
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
G EAL +TF+G+L AC HGG V +G++ + M + I P++E
Sbjct: 295 HGKHDEALELYAQMLQEGERPDAVTFVGLLLACVHGGMVLKGKELLKSMEEVHKISPKLE 354
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HYGCM+DL R G + EA L++ MPMKP+ V G+LL C H N E+A ++A + + +
Sbjct: 355 HYGCMIDLLGRVGKLQEACDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA-EIASEALMK 413
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGV-LHDFVAG 499
++P G +++N+YAA ++W V +R+ M K + K G S+ GV +H F
Sbjct: 414 LEPTN-PGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEAGVEVHKFTVE 472
Query: 500 DSTYKQASLIYKTLGEITMQAMQEGYKPD 528
D ++ ++ IY+ L EI+ + E + D
Sbjct: 473 DKSHPRSYEIYQVLDEISRRMKPEKSRFD 501
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 140/354 (39%), Gaps = 79/354 (22%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGH 93
+ L +HSQ +GF ++ L+ Y G L A +VF++ N +WN MI G+
Sbjct: 99 RPLRLLHSQFFRSGFESDSFCCTALITAYAKLGALCCARRVFDEMSNRDVPVWNAMITGY 158
Query: 94 AR-----------SETPEKSVYLYKQMI---------------------DKETEPDEYTY 121
R P K+V + +I DK +P+ T
Sbjct: 159 QRRGDMKAAMELFDSMPNKNVTSWTTVISGFSQNGNYSEALTMFLCMEKDKSVKPNHITL 218
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFD 180
+L CA G G ++ G +G+ N+++R + +Y +CG + A+ LFD
Sbjct: 219 VSVLPACANLGELEIGRRLEGYARENGFFDNIYVRNATLEMY----SKCGMIDVAKRLFD 274
Query: 181 DM-PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
++ R+++SWNS MI A +GK +AL
Sbjct: 275 EIGNQRNLISWNS-------------------------------MIGSLATHGKHDEALE 303
Query: 240 LFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
L+ +M + D V V L AC G + GK + +EE + P L +I
Sbjct: 304 LYAQMLQEGERPDAVTFVGLLLACVHGGMVLKGKELLKSMEEVHKIS--PKLEHY-GCMI 360
Query: 300 HMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAKQG------YAQEALLTF 346
+ G+++EA + + M + + V W +++ + G A EAL+
Sbjct: 361 DLLGRVGKLQEACDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALMKL 414
>gi|356529748|ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 604
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 187/553 (33%), Positives = 297/553 (53%), Gaps = 62/553 (11%)
Query: 7 IPANPATSSK--ALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVT 64
+P NP SS+ A Q SLL+ + + Q+H+ I+ G ++ + L+A
Sbjct: 15 LPNNPPQSSELNAKFNVQGLSLLKRCKSMEEFKQVHAHILKLGLFYDSFCGSNLVATCAL 74
Query: 65 S--GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYS 122
S G + A +F + E P + +N MIRG+ S E+++ LY +M+++ EPD +TY
Sbjct: 75 SRWGSMEYACSIFRQIEEPGSFEYNTMIRGNVNSMNLEEALLLYVEMLERGIEPDNFTYP 134
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDD 181
F+L C+ G +EG Q+H V +G +VF++ L+N+Y G+CG + A ++F+
Sbjct: 135 FVLKACSLLGALKEGVQIHAHVFKAGLEGDVFVQNGLINMY----GKCGAIEHASVVFEQ 190
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
M +SV SW+S++ GA H +V W + L L
Sbjct: 191 MDEKSVASWSSII----------GA--------HASVEMW-------------HECLMLL 219
Query: 242 NEMR-RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIH 300
+M R ++ LV+ALSAC +G G+ IH + N S + V++ +LI
Sbjct: 220 GDMSGEGRHRAEESILVSALSACTHLGSPNFGRCIHGILLRNIS----ELNVAVKTSLID 275
Query: 301 MYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LT 345
MY G +E+ VF+ M ++N S+T +ITG A G +EAL +
Sbjct: 276 MYVKSGSLEKGLCVFQNMAQKNRYSYTVIITGLAIHGRGREALSVFSDMLEEGLAPDDVV 335
Query: 346 FLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
++GVLSACSH G V+EG Q F + IKP I+HYGCMVDL RAG++ A+ L+++M
Sbjct: 336 YVGVLSACSHAGLVNEGLQCFNRLQFEHKIKPTIQHYGCMVDLMGRAGMLKGAYDLIKSM 395
Query: 406 PMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQD 465
P+KPND V SLL C++H+N E+ ++A + + +++ YL L AN+YA AK+W D
Sbjct: 396 PIKPNDVVWRSLLSACKVHHNLEIG-EIAAENIFKLNQHNPGDYLVL-ANMYARAKKWAD 453
Query: 466 VAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGY 525
VA +R +M + + + PG S V+ N ++ FV+ D + Q IY + ++ Q EGY
Sbjct: 454 VARIRTEMAEKHLVQTPGFSLVEANRNVYKFVSQDKSQPQCETIYDMIQQMEWQLKFEGY 513
Query: 526 KPDISELFLGIEE 538
PD+S++ L ++E
Sbjct: 514 TPDMSQVLLDVDE 526
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 184/541 (34%), Positives = 288/541 (53%), Gaps = 59/541 (10%)
Query: 17 ALTTRQIFSLLQIRNTTKT-LFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHK 73
+ R+ SL+Q+ ++++ L QIH+ I +G +N K L F + S + A +
Sbjct: 31 SFILRKCISLVQLCGSSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQ 90
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQM-IDKETEPDEYTYSFLLSVCARCG 132
+F + + P+ WN MIRG A SE P +V L+ QM PD +T+ FL A+
Sbjct: 91 IFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLM 150
Query: 133 LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNS 192
GE +H V+ +G+ S F++ NS
Sbjct: 151 DVSLGEGIHSVVVRNGFDSLRFVQ----------------------------------NS 176
Query: 193 LLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLD 252
L+ Y G + A+++F+ M +R+ V+W ++I+G A NG +AL+L+ EM V D
Sbjct: 177 LVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPD 236
Query: 253 QVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAY 312
+V+ LSAC E+G L LG+ +H Y+ + V + +NAL+ +Y+ CG +A
Sbjct: 237 GFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHA----SNALLDLYSKCGNFRDAQ 292
Query: 313 GVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGG 357
VF +M+ R+ VSWTS+I G A G EAL +TF+GVL ACSH G
Sbjct: 293 KVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCG 352
Query: 358 FVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSL 417
+DEG +F M + +GI PRIEH+GCMVDL RAG + +A+ ++NMP+ PN + +L
Sbjct: 353 MLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTL 412
Query: 418 LLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMG 477
L C IH + EL +VA+ + ++ ++ +G L++N+YA+ +RW DV VR+ M+ G
Sbjct: 413 LGACTIHGHLELG-EVARAEIQRLE-QRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKG 470
Query: 478 VRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIE 537
V+K PG S V++ +++F+ GD ++ Q+ Y L +IT EGY P + IE
Sbjct: 471 VKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLADIE 530
Query: 538 E 538
E
Sbjct: 531 E 531
>gi|297846530|ref|XP_002891146.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336988|gb|EFH67405.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 554
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 173/486 (35%), Positives = 270/486 (55%), Gaps = 35/486 (7%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H + G +Y+ L+ Y G + HKVF++ WN +I +
Sbjct: 51 KVHGYAVKTGLESDSYVCNSLMGMYAALGKMEITHKVFDEMPERDVVSWNGLISSYVGHG 110
Query: 98 TPEKSVYLYKQMI-DKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
E ++ ++++M + + DE T LS C+ GE+++ R + + + +V
Sbjct: 111 RFEDAISVFQRMSRESNLKADEGTIVSTLSACSVLKNLEIGERIY-RYVVTEFEMSVRTG 169
Query: 157 TNLMNLYLMSGGECGVGC---ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
L++++ C GC AR +FD M ++V W S++ GYV G D A ++F+
Sbjct: 170 NALVDMF------CKCGCLDKARAIFDSMRDKNVKCWTSMVSGYVSNGRTDEARELFERS 223
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK 273
P ++VV WT M++G Q + +AL LF M+ AR+ D LV+ L+ CA+ G L+ GK
Sbjct: 224 PVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTARIRPDNFVLVSLLTGCAQTGALEQGK 283
Query: 274 WIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF 333
WIH Y+ EN R V + AL+ MYA CG IE A GVF +M+ R+T SWTS+I G
Sbjct: 284 WIHGYIREN----RVTVDKVVGTALVDMYAKCGCIETALGVFYEMKERDTASWTSLIYGL 339
Query: 334 AKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
A G + AL +TF+ VL+ACSHGGFV EGR+ F M + I+P+
Sbjct: 340 ATNGMSGRALDLYYEMENVGVRLDDITFVAVLTACSHGGFVAEGRRIFYSMTERHKIQPK 399
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDA---VLGSLLLGCRIHNNAELASQVAQ 435
EHY C++DL RAGL+DEA L+ M + + V SLL R + N ++A +VA+
Sbjct: 400 SEHYSCLIDLLCRAGLLDEAEELIDKMHGERDKTLVPVYCSLLSAARNYGNVKIAERVAE 459
Query: 436 KLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHD 495
KL +++ ++ + L+A+VYA+A RW+DV VR+KM +G+RK PG S ++++GV H+
Sbjct: 460 KL-EKVEVSDSSAH-TLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEVDGVSHE 517
Query: 496 FVAGDS 501
F+ G+
Sbjct: 518 FIVGND 523
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 151/336 (44%), Gaps = 66/336 (19%)
Query: 89 MIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASG 148
M++ A S++ K + L+ ++ + PD +T +L R EGE+VHG + +G
Sbjct: 1 MLKSLAESKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKTG 60
Query: 149 YCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWK 208
S+ ++ +LM +Y G + +FD+MP R VVSWN L+ YV G + A
Sbjct: 61 LESDSYVCNSLMGMYAALG---KMEITHKVFDEMPERDVVSWNGLISSYVGHGRFEDAIS 117
Query: 209 IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGD 268
+F M R + + D+ +V+ LSAC+ + +
Sbjct: 118 VFQRMS------------------------------RESNLKADEGTIVSTLSACSVLKN 147
Query: 269 LKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTS 328
L++G+ I+ YV F + V NAL+ M+ CG +++A +F M+ +N WTS
Sbjct: 148 LEIGERIYRYVVTEFEMS-----VRTGNALVDMFCKCGCLDKARAIFDSMRDKNVKCWTS 202
Query: 329 MITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDL 388
M++G+ G DE R+ FE +K + + M++
Sbjct: 203 MVSGYVSNGRT--------------------DEARELFE----RSPVKDVV-LWTAMMNG 237
Query: 389 FSRAGLMDEA---FSLVQNMPMKPNDAVLGSLLLGC 421
+ + DEA F +Q ++P++ VL SLL GC
Sbjct: 238 YVQFNRFDEALELFRCMQTARIRPDNFVLVSLLTGC 273
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 175/539 (32%), Positives = 299/539 (55%), Gaps = 37/539 (6%)
Query: 22 QIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENP 81
Q+FSL R ++H+QII +G + + L+ Y G L +A K+F+
Sbjct: 15 QLFSL--GRKNPFIAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQ 72
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCG--LFREGEQ 139
W ++ S P K+ + ++ + +PD + +S L+ CA G + G+Q
Sbjct: 73 DHVAWATVLSACNLSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQ 132
Query: 140 VHGRVLASGYCSNVFIRTNLMNLY----LMSGGECGVGCARLLFDDMPARSVVSWNSLLK 195
+H R L S + + ++++L+++Y L G R +FD + S +SW +++
Sbjct: 133 LHARFLLSPFFEDDVVKSSLVDMYAKFELPDYG-------RAVFDSIFELSSISWTAMIS 185
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL-DQV 254
GY + G A ++F E P +N+ +WT +ISG Q+G + AL LF EMRR V + D +
Sbjct: 186 GYARSGRKLEALELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPL 245
Query: 255 ALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGV 314
L + + ACA +LGK +H V ++G E L ++NAL+ MYA C ++ A +
Sbjct: 246 VLSSVVGACANSAVRELGKQVHCVV---ITLGYESCLF-ISNALVDMYAKCSDVVAAKYI 301
Query: 315 FRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFV 359
F +M+R++ VSWTS+I G A+ G A+EAL +TF+G++ ACSH G V
Sbjct: 302 FCEMRRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLV 361
Query: 360 DEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLL 419
+GR F+ M +++GI+P ++HY C++DLFSR+G +DEA +L++ MP+KP++ +LL
Sbjct: 362 SKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLS 421
Query: 420 GCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVR 479
C+ H N ++A ++A L+ ++ PE + Y+ L++N+YA A W++V+ VR+ M V+
Sbjct: 422 ACKHHGNTKMAVRIADHLL-DLKPEDPSSYI-LLSNIYAGAGMWENVSMVRKLMAVKEVK 479
Query: 480 KPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
K PG S V + F AG+++ I + ++ + + GY PD S + L +++
Sbjct: 480 KVPGYSCVDLGREFQVFHAGEASQPMKDEILGLMTKLDSEMRRRGYVPDTSSVLLDMDQ 538
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 173/518 (33%), Positives = 282/518 (54%), Gaps = 56/518 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKTENPSTAIWNQMIRGHAR 95
Q H++I+ G ++ + L+A S G + A +F + + P + +N M+RGH +
Sbjct: 6 QSHARILKXGLFXDSFCASNLVATCALSDWGSMDYACSIFRQMDEPGSFZFNTMMRGHVK 65
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
E+++ YK+M ++ +PD +TY LL CAR EG QVH +L G ++VF+
Sbjct: 66 DMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLENDVFV 125
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
+ +L+++Y GE GV CA +F+ M RSV SW++L+ + G ++ +M
Sbjct: 126 QNSLISMY-GKCGEIGVCCA--VFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMS- 181
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
N W ++ LV+ LSAC +G L LG+ +
Sbjct: 182 -NEGYWRA----------------------------EESILVSVLSACTHLGALDLGRSV 212
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
H ++ N S + V + +LI MY CG + + +F+KM ++N +S++ MI+G A
Sbjct: 213 HGFLLRNVS----GLNVIVETSLIEMYLKCGXLYKGMCLFQKMAKKNKLSYSVMISGLAM 268
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
GY +E L + ++GVL+ACSH G V EG Q F M GI+P I+
Sbjct: 269 HGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQ 328
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HYGCMVDL RAG +DEA L+++MPM+PND + SLL ++HNN + A ++A K + +
Sbjct: 329 HYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNLQ-AGEIAAKQLFK 387
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
+D ++A+ Y+ L +N+YA A+RW+DVA R M G+ + PG S V++ +H FV+ D
Sbjct: 388 LDSQKASDYVVL-SNMYAQAQRWEDVARTRTNMFSKGLSQRPGFSLVEVKRKMHRFVSQD 446
Query: 501 STYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ + Q+ +Y+ L ++ Q EGY PD +++ ++E
Sbjct: 447 AGHPQSESVYEMLYQMEWQLKFEGYXPDTTQVLCDVDE 484
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 178/488 (36%), Positives = 271/488 (55%), Gaps = 45/488 (9%)
Query: 68 LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSV 127
+I AH V + + S I+ M+R S +L P+ YT+ F+
Sbjct: 1 MIKAHAVIPTSSHNSMRIFLSMVR---------VSGFL----------PNRYTFVFVFKA 41
Query: 128 CARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSV 187
C EGEQ+ + G SN+F+ ++ +Y G V AR +FD + +
Sbjct: 42 CGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGL---VDEARRVFDWSLDQDL 98
Query: 188 VSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRA 247
SWN ++ GYV G+I A ++FDEM R+VVSWTT+I+G Q G ++AL LF+EM +
Sbjct: 99 YSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQT 158
Query: 248 RVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGE 307
++ L +AL+ACA + L G+WIH Y++++ E +L SL + MYA CGE
Sbjct: 159 GPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASL----LDMYAKCGE 214
Query: 308 IEEAYGVFRKMQ--RRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVL 350
I+ A VF + W +MI G+A G ++EA+ +TF+ +L
Sbjct: 215 IDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALL 274
Query: 351 SACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPN 410
+ACSHG V+EGR +F+ M ++GI+P IEHYGCMVDL R+GL+ EA V NMPM P+
Sbjct: 275 NACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPD 334
Query: 411 DAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVR 470
+ G+LL CRIH + E ++ K++ E+D + G L+AN+Y+A+ +W + AVR
Sbjct: 335 ATIWGALLGACRIHKDIERGQRIG-KIIKELDSDH-IGCHVLLANLYSASGQWDEAKAVR 392
Query: 471 QKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
QK+ G +K PG S +++NGV H F+ GD ++ Q +Y L E+T + GY P+
Sbjct: 393 QKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYVPEFG 452
Query: 531 ELFLGIEE 538
E+ L I++
Sbjct: 453 EVLLDIDD 460
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 164/386 (42%), Gaps = 61/386 (15%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QI I G ++ ++ Y G + A +VF+ + + WN MI G+ S
Sbjct: 53 QIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSG 112
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++ K+M D+ +E D +++ +++ + G F+E + +L +G N F
Sbjct: 113 EIGRA----KEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLA 168
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMP-------ARSVVSWN-----SLLKGYVKRGDIDG 205
+ + CA L+ D +S + N SLL Y K G+ID
Sbjct: 169 SAL-----------AACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDF 217
Query: 206 AWKIF-DEMPHR-NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSAC 263
A K+F DE + V W MI G A +GKS++A+ LF +M+ +V ++V VA L+AC
Sbjct: 218 AAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNAC 277
Query: 264 AEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEA-YGVFRKMQRRN 322
+ ++ G+ + ++ + E + ++ + G ++EA VF +
Sbjct: 278 SHGKLVEEGRGYFKSMASSYGIEPE---IEHYGCMVDLLGRSGLLKEAEETVFNMPMAPD 334
Query: 323 TVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
W ++ L AC ++ G++ + + + +H
Sbjct: 335 ATIWGAL--------------------LGACRIHKDIERGQRIGKIIKE-----LDSDHI 369
Query: 383 GCMV---DLFSRAGLMDEAFSLVQNM 405
GC V +L+S +G DEA ++ Q +
Sbjct: 370 GCHVLLANLYSASGQWDEAKAVRQKI 395
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 173/514 (33%), Positives = 287/514 (55%), Gaps = 52/514 (10%)
Query: 57 KLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEP 116
+++ ++ SG L +A +VFE +T WN M+ G++ + + +Q+ D+ EP
Sbjct: 10 RVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRG---KIKVARQLFDRIPEP 66
Query: 117 DEYTYSFLLSV------CARCGLFREGEQVHG----RVLASGYCSN------------VF 154
D ++Y+ +L+ LF + V + SG+ N +
Sbjct: 67 DIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMP 126
Query: 155 IRTNLMNLYLMSGG-ECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDE 212
+R ++ ++SG E G + A+ LF+ P RSVV+W +++ G++K G I+ A K F+E
Sbjct: 127 VRNSVSWNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAMITGFMKFGKIELAEKYFEE 186
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
MP +N+V+W MI+G +N ++ L LF M + + +L + L C+ + LKLG
Sbjct: 187 MPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLG 246
Query: 273 KWIHSYVEENFSVGREPVL--VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMI 330
K +H + + PV ++ +L+ MY CG++E+A+ +F M +++ V+W +MI
Sbjct: 247 KQVHQLI------CKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMI 300
Query: 331 TGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGI 375
+G+A+ G ++AL +TF+ VLSAC+H GFVD G ++F M +++G+
Sbjct: 301 SGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGV 360
Query: 376 KPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQ 435
+ + +HY C+VDL R G + EA L++ MP KP+ A+ G+LL CRIH N ELA A+
Sbjct: 361 EAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAK 420
Query: 436 KLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHD 495
L+ +DPE AAGY+ L ANVYAA RW VA VR+ M V K PG SW+++ V+H+
Sbjct: 421 NLL-NLDPESAAGYVQL-ANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHE 478
Query: 496 FVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDI 529
F +GD + + + I++ L E+ + GY PD+
Sbjct: 479 FRSGDRIHPELAFIHEKLNELERKMRLAGYVPDL 512
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 126/282 (44%), Gaps = 62/282 (21%)
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCA-QNGKSRQALSLFN 242
+ +V+S N ++ +++ GD++ A ++F+ M + V+W +M++G + + GK + A LF+
Sbjct: 2 SSNVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFD 61
Query: 243 ---------------------EMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE 281
++ AR+ DQ+ + S I + E
Sbjct: 62 RIPEPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQ-ARE 120
Query: 282 NFSVGREPVLVSLN-NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG--- 337
F V PV S++ NA+I Y G+++ A +F R+ V+WT+MITGF K G
Sbjct: 121 LFLV--MPVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAMITGFMKFGKIE 178
Query: 338 ----YAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAG 393
Y +E + L +A G+++ C +N G+K LF R
Sbjct: 179 LAEKYFEEMPMKNLVTWNAMI-AGYIE------NCQAEN-GLK-----------LFKR-- 217
Query: 394 LMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQ 435
+++ F +PN + L S+LLGC + +L QV Q
Sbjct: 218 MVESGF--------RPNPSSLSSVLLGCSNLSALKLGKQVHQ 251
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 6/136 (4%)
Query: 2 LVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAF 61
+VE NP++ S L S L++ Q+H I + S LL+
Sbjct: 218 MVESGFRPNPSSLSSVLLGCSNLSALKLGK------QVHQLICKSPVSWNITAGTSLLSM 271
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
Y G L +A K+F WN MI G+A+ EK++YL+ +M D+ +PD T+
Sbjct: 272 YCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITF 331
Query: 122 SFLLSVCARCGLFREG 137
+LS C G G
Sbjct: 332 VAVLSACNHAGFVDLG 347
>gi|449435366|ref|XP_004135466.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 190/544 (34%), Positives = 302/544 (55%), Gaps = 70/544 (12%)
Query: 14 SSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKN---YILAKLLAFYVTSGYLIN 70
+SK +R + L + +K L QIH+Q I N FS N ++ +++L +V+S LI+
Sbjct: 20 NSKTHQSRFLHLLTDCTDLSK-LKQIHAQAIRN-FSTHNSSLFLYSRIL--HVSS--LID 73
Query: 71 ---AHKVFEKTENPSTAIWNQMIRGHARS-ETPEKSVYLYKQMIDK-ETEPDEYTYSFLL 125
A +VF + +NP++ +WN +I ARS + E+++ ++ +M+++ EPD++T+ FLL
Sbjct: 74 FDYACRVFNQIDNPNSFMWNTLIGACARSLDRKEQAIEIFYRMLEEGSVEPDKHTFPFLL 133
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPA 184
CA EG Q H ++ G +V++ +L++LY CG + A +F+ MP
Sbjct: 134 KACAYVFALSEGRQAHAQIFKLGLDLDVYVGNSLIHLY----ASCGCLSMALKVFEKMPL 189
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
RS+VSWN ++ YV+ G + A K+F EM + +G + Q++
Sbjct: 190 RSLVSWNVMIDAYVQSGLFENALKLFVEMQ-----------NSFEPDGYTMQSI------ 232
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYAS 304
+SACA IG L LG W H+YV S G V +N++L+ MY+
Sbjct: 233 ---------------VSACAGIGALSLGMWAHAYVLRKAS-GAMAGDVLINSSLVDMYSK 276
Query: 305 CGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------------LTFLG 348
CG + A VF M + + SW SMI A G Q AL +TF+G
Sbjct: 277 CGSLRMAQQVFETMPKHDLNSWNSMILALAMHGRGQAALQCFSRLVEMEKFLPNSVTFVG 336
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
VLSAC+HGG V +GR++F+ M ++ I+PR+EHYGC+VDL SR+G +DEA LV NM +K
Sbjct: 337 VLSACNHGGMVADGRKYFDMMVNDYKIEPRLEHYGCLVDLLSRSGFIDEALELVANMHIK 396
Query: 409 PNDAVLGSLLLGCRIHN-NAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVA 467
P+ + SLL C N EL+ +VA K++ + + ++G +++ VYA+A++W DV
Sbjct: 397 PDAVIWRSLLDACYKQNAGVELSEEVAFKIL-QSEKTISSGVYVMLSRVYASARQWNDVG 455
Query: 468 AVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
+R+ M MGV K PG S ++I+G+ H+F AGD+++ + IY + I + + GY P
Sbjct: 456 IIRKVMTDMGVTKEPGCSSIEIDGISHEFFAGDTSHPRIKEIYGVIDLIEEKLERRGYSP 515
Query: 528 DISE 531
D S+
Sbjct: 516 DCSQ 519
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 183/551 (33%), Positives = 281/551 (50%), Gaps = 81/551 (14%)
Query: 5 EIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVT 64
+++ A+P + S A + L +T L Q HSQII G S N + +++ F
Sbjct: 5 QLLQASPPSLSSAKAHKLPLYGLDSCSTMAELKQYHSQIIRLGLSADNDAMGRVIKFCAI 64
Query: 65 SGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFL 124
S G+ R + +++Y +M+ K P+++TY L
Sbjct: 65 SK------------------------SGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPL 100
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPA 184
+ C EG+Q+H VL G+ ++ F NL+++Y
Sbjct: 101 IRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMY--------------------- 139
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR--NVVSWTTMISGCAQNGKSRQALSLFN 242
V++ SL + A ++FD MP R N VSW MI+ Q+ + +A +LF+
Sbjct: 140 ---VNFQSL----------EQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFD 186
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMY 302
MR V LD+ + LSAC +G L+ GKWIH Y+E++ G E + L +I MY
Sbjct: 187 RMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKS---GIE-LDSKLATTVIDMY 242
Query: 303 ASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFL 347
CG +E+A VF ++ ++ SW MI G A G + A+ +TF+
Sbjct: 243 CKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFV 302
Query: 348 GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM 407
VLSAC+H G V+EG+ +F+ M + G+KP +EH+GCMVDL RAGL++EA L+ MP+
Sbjct: 303 NVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPV 362
Query: 408 KPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVA 467
P+ VLG+L+ CRIH N EL Q+ +K++ E++P + Y+ L+AN+YA+A RW+DVA
Sbjct: 363 NPDAGVLGALVGACRIHGNTELGEQIGKKVI-ELEPHNSGRYV-LLANLYASAGRWEDVA 420
Query: 468 AVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
VR+ M GV+K PG S ++ + +F+AG + QA IY L EI GY P
Sbjct: 421 KVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVP 480
Query: 528 DISELFLGIEE 538
D + I+E
Sbjct: 481 DTDGVLHDIDE 491
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 184/528 (34%), Positives = 272/528 (51%), Gaps = 74/528 (14%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
H Q + GF ++ + L+ Y G L +A +F++ + W MI G+ ++E
Sbjct: 2038 HQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQA 2097
Query: 100 EKSVYLYKQMIDKETEP--------DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCS 151
+ ++ L+K +++ETE D +LS C+R E VHG V+ G+
Sbjct: 2098 DNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGF-- 2155
Query: 152 NVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFD 211
G GVG N+L+ Y K G + K+FD
Sbjct: 2156 ---------------DGSIGVG-----------------NTLMDAYAKCGQPLVSKKVFD 2183
Query: 212 EMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM-RRARVGLDQVALVAALSACAEIGDLK 270
M ++ +SW +MI+ AQ+G S +AL +F+ M R V + V L A L ACA G L+
Sbjct: 2184 WMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALR 2243
Query: 271 LGKWIHSYV-----EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVS 325
GK IH V E N VG ++I MY CG +E A F +M+ +N S
Sbjct: 2244 AGKCIHDQVIKMDLEYNVCVG---------TSIIDMYCKCGRVEMAKKTFDRMKEKNVKS 2294
Query: 326 WTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMN 370
WT+M+ G+ G A+EAL +TF+ VL+ACSH G V+EG +F M
Sbjct: 2295 WTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMK 2354
Query: 371 QNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELA 430
+ I+P IEHYGCMVDLF RAG ++EA++L++ M MKP+ V GSLL CRIH N +L
Sbjct: 2355 HKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLG 2414
Query: 431 SQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQIN 490
AQKL E+DP+ GY L++N+YA A RW DV +R M + KPPG S V++
Sbjct: 2415 EIAAQKLF-ELDPDN-CGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELK 2472
Query: 491 GVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
G +H F+ GD + +IYK L ++T++ + GY P+++ + ++E
Sbjct: 2473 GRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDVDE 2520
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/416 (35%), Positives = 228/416 (54%), Gaps = 28/416 (6%)
Query: 3 VEEIIPAN--PATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
++ P+ P T + ++ LLQ K L QIH++II +G S + KL+
Sbjct: 8 THDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIH 67
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y T G + A +F + +NP T WN +IR + + E+++ LYK M+ + D++T
Sbjct: 68 LYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFT 127
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLF 179
+ F++ C G+ VHG ++ G+ +VF++ NL++ Y +CG A +F
Sbjct: 128 FPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYF----KCGHTRFALKVF 183
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
+ M R+VVSW +++ G + GD+ A +IFDE+P +NVVSWT MI+G +N + +AL
Sbjct: 184 EKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALE 243
Query: 240 LFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEEN-FSVGREPVLVSLNNAL 298
LF M+ + ++ +V+ + AC E+G L LG+ IH Y +N +G V L AL
Sbjct: 244 LFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIG-----VYLGTAL 298
Query: 299 IHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------------- 343
I MY+ CG I++A VF M R++ +W SMIT G QEAL
Sbjct: 299 IDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDA 358
Query: 344 LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAF 399
+TF+GVL AC H V EG +F M Q++GI P EHY CM +L++R+ +DEAF
Sbjct: 359 ITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAF 414
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 187/436 (42%), Gaps = 85/436 (19%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H ++ GF + L+ Y G + + KVF+ E WN MI +A+S
Sbjct: 2146 VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGL 2205
Query: 99 PEKSVYLYKQMIDK-ETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ ++ M+ + T S +L CA G R G+ +H +V+ NV + T
Sbjct: 2206 SGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGT 2265
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
+++++Y +CG V A+ FD M ++V SW +++ GY
Sbjct: 2266 SIIDMYC----KCGRVEMAKKTFDRMKEKNVKSWTAMVAGY------------------- 2302
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
+G++++AL +F +M RA V + + V+ L+AC+ G ++ G
Sbjct: 2303 ------------GMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWF 2350
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR-NTVSWTSMITGFAK 335
+ ++ + + EP + ++ ++ G + EAY + ++M+ + + V W S+
Sbjct: 2351 NAMKHKYDI--EPG-IEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSL------ 2401
Query: 336 QGYAQEALLTFLGVLSACSHGGFVDEG----RQFFECMNQNWGIKPRIEHYGCMVDLFSR 391
L AC VD G ++ FE N G +Y + +L++
Sbjct: 2402 --------------LGACRIHKNVDLGEIAAQKLFELDPDNCG------YYVLLSNLYAD 2441
Query: 392 AGL---MDEAFSLVQNMPM-KPNDAVLGSL-------LLGCRIHNNAELASQVAQKLVAE 440
AG ++ L++N + KP L L L+G + H + E+ + +KL E
Sbjct: 2442 AGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLE 2501
Query: 441 IDPEQAAGYLALVANV 456
+ Q GY+ + +V
Sbjct: 2502 L---QKIGYVPNMTSV 2514
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 132/337 (39%), Gaps = 98/337 (29%)
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDM 182
FLL C F+ Q+H +++ SG ++ + L++LY G + A LLF +
Sbjct: 32 FLLQNCKN---FKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGR---IAYAILLFYQI 85
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
+WN +++ N + NG S QAL L+
Sbjct: 86 QNPCTFTWNLIIRA--------------------NTI-----------NGLSEQALMLYK 114
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIH-SYVEENFSVGREPVLVSLNNALIHM 301
M + D+ + AC + LGK +H S ++ FS V + N LI
Sbjct: 115 NMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGD-----VFVQNNLIDF 169
Query: 302 Y-------------------------------ASCGEIEEAYGVFRKMQRRNTVSWTSMI 330
Y SCG+++EA +F ++ +N VSWT+MI
Sbjct: 170 YFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMI 229
Query: 331 TGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGI 375
G+ + +EAL T + ++ AC+ G + GR ++ I
Sbjct: 230 NGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGI-----HDYAI 284
Query: 376 KPRIE---HYG-CMVDLFSRAGLMDEAFSLVQNMPMK 408
K IE + G ++D++S+ G + +A + + MP K
Sbjct: 285 KNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRK 321
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 171/511 (33%), Positives = 272/511 (53%), Gaps = 54/511 (10%)
Query: 44 IINGFSQKNYI-LAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKS 102
+ +G S ++ + L+ Y + GY+ +A K+F++ WN +I G+A + +++
Sbjct: 160 VFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEA 219
Query: 103 VYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNL 162
+ L+K+M+ +PDE T ++S CA+ G + G QVH + G SN+ I L++L
Sbjct: 220 LDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDL 279
Query: 163 YLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWT 222
Y K G+++ A +F + +++V+SW
Sbjct: 280 Y----------------------------------SKCGEVETACGLFQGLSNKDVISWN 305
Query: 223 TMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEEN 282
TMI G ++AL LF EM R+ + V +++ L ACA++G + G+WIH Y+++
Sbjct: 306 TMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKR 365
Query: 283 FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEA 342
SL +LI MYA CG+IE A+ VF M R + +MI GFA G A A
Sbjct: 366 IKGVTNAS--SLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAA 423
Query: 343 L---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVD 387
+TF+G+LSACSH G +D GR+ F M QN+ I P++EHYGCM+D
Sbjct: 424 FDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMID 483
Query: 388 LFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAA 447
L GL EA ++ M M+P+ + SLL C++H N EL AQKL+ +I+PE
Sbjct: 484 LLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLI-KIEPENPG 542
Query: 448 GYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQAS 507
Y+ L++N+YA A RW +VA +R + G++K PG S ++I+ V+H+F+ GD + +
Sbjct: 543 SYV-LLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNR 601
Query: 508 LIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
IY L E+ + + G+ PD SE+ +EE
Sbjct: 602 EIYGMLEEMEVLLEEAGFVPDTSEVLQEMEE 632
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 148/442 (33%), Positives = 244/442 (55%), Gaps = 28/442 (6%)
Query: 24 FSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY---LINAHKVFEKTEN 80
SLL T ++L IH+Q+I G NY L++LL F + S L A VFE +
Sbjct: 6 LSLLHNCKTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQE 65
Query: 81 PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
P+ IWN M RGHA S P ++ LY MI P+ YT+ FLL CA+ + +EG+Q+
Sbjct: 66 PNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQI 125
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKR 200
HG VL GY ++++ T+L+++Y+ +G A +FD R VVS+ +L+ GY R
Sbjct: 126 HGHVLKLGYELDLYVHTSLISMYVKNGRWKD---AHKVFDGSSHRDVVSYTALITGYASR 182
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
G I+ A K+FDE+P ++VVSW +ISG A G +++AL LF EM + V D+ +V +
Sbjct: 183 GYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVV 242
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
SACA+ G ++LG+ +HS+++++ +G +V NALI +Y+ CGE+E A G+F+ +
Sbjct: 243 SACAQSGSIQLGRQVHSWIDDH-GLGSNLKIV---NALIDLYSKCGEVETACGLFQGLSN 298
Query: 321 RNTVSWTSMITGFAKQGYAQEALLTF---------------LGVLSACSHGGFVDEGRQF 365
++ +SW +MI G+ +EALL F L +L AC+ G +D GR
Sbjct: 299 KDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWI 358
Query: 366 FECMNQNW-GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
+++ G+ ++D++++ G ++ A + +M + A +++ G +H
Sbjct: 359 HVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSAC-NAMIFGFAMH 417
Query: 425 NNAELASQVAQKLVAE-IDPEQ 445
A A + ++ I+P+
Sbjct: 418 GRANAAFDIFSRMRKNGIEPDD 439
>gi|90265157|emb|CAH67783.1| H0201G08.10 [Oryza sativa Indica Group]
Length = 530
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 172/507 (33%), Positives = 271/507 (53%), Gaps = 35/507 (6%)
Query: 38 QIHSQIIINGFSQKN-YILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
IH ++ G ++ LL+ Y G +A ++F++ M R H S
Sbjct: 30 SIHCLLLKAGLLHVGAHLPTALLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARAHVAS 89
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLF----REGEQVHGRVLASGYCSN 152
+++ ++ M+ PD + L C G + G+ +H V+ SG +
Sbjct: 90 GQAAQAIAVFGDMVADGVFPDNVAVAVALGACHGAGSWTARRNPGKMIHALVVTSGIVPD 149
Query: 153 VFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFD 211
VF+ T L+ +Y GE G + +R +FDDMP+RS ++WN++L Y + G +D A+++F
Sbjct: 150 VFVSTELIRVY----GESGELPVSRRVFDDMPSRSTITWNAMLHQYARHGKVDTAYEMFL 205
Query: 212 EMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM---RRARVGLDQVALVAALSACAEIGD 268
MP R+VVSW T+++G G+ R+AL LF +M V + + L ACA G
Sbjct: 206 AMPRRDVVSWNTVLAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTMSTILGACAGAGC 265
Query: 269 LKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTV-SWT 327
L+ G W+H+Y+E N R L+ LI MY CG I+ A VF K R+ + SWT
Sbjct: 266 LETGIWVHAYIERN----RMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKKDLFSWT 321
Query: 328 SMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQN 372
++I G A G +AL +T +GVL+AC+HGG VDEG +F M
Sbjct: 322 TVICGLAMHGRTTDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAK 381
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQ 432
+ I P+IEHYGCM+DL R G + EA+S+++ MPM PN + G+ L C++H N EL
Sbjct: 382 FRITPKIEHYGCMIDLLGRVGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNMELGKI 441
Query: 433 VAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGV 492
A++L +DP+ G + +++++YA A+ W +A R++M M V+K PG S +++ G
Sbjct: 442 AAEELT-RLDPDDPWGRV-MLSSMYAKAQDWIGLARERREMNSMQVKKTPGCSSIELKGE 499
Query: 493 LHDFVAGDSTYKQASLIYKTLGEITMQ 519
+H+FVAG S + Q + I L ++ Q
Sbjct: 500 VHEFVAGGSQHPQYAEICSVLQDVEAQ 526
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 158/356 (44%), Gaps = 42/356 (11%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
M+ + + P N A + S RN K IH+ ++ +G ++ +L+
Sbjct: 102 MVADGVFPDNVAVAVALGACHGAGSWTARRNPGK---MIHALVVTSGIVPDVFVSTELIR 158
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y SG L + +VF+ + ST WN M+ +AR + + ++ M + D +
Sbjct: 159 VYGESGELPVSRRVFDDMPSRSTITWNAMLHQYARHGKVDTAYEMFLAMPRR----DVVS 214
Query: 121 YSFLLS---VCARC----GLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVG 173
++ +L+ V RC GLFR+ +++ C+ + N+ + + G G G
Sbjct: 215 WNTVLAGYCVAGRCREALGLFRQ-------MVSPSSCA---VHPNVPTMSTILGACAGAG 264
Query: 174 CARLLFDDMPARSVVSWN----------SLLKGYVKRGDIDGAWKIFDEMPH-RNVVSWT 222
C L + + + N L+ Y K G ID A ++F++ P +++ SWT
Sbjct: 265 C---LETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKKDLFSWT 321
Query: 223 TMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEEN 282
T+I G A +G++ AL +F+ M+ + D V LV L+ACA G + G +E
Sbjct: 322 TVICGLAMHGRTTDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAK 381
Query: 283 FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAKQG 337
F + + + +I + G ++EAY + R M NTV W + ++ G
Sbjct: 382 FRITPK---IEHYGCMIDLLGRVGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHG 434
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 161/531 (30%), Positives = 286/531 (53%), Gaps = 56/531 (10%)
Query: 23 IFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPS 82
I +L + RN + + Q+H+Q+ G + KLL L+ AH +F K E
Sbjct: 7 ISTLFKCRNIFQ-IKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERD 65
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHG 142
W+ MI G ++ E+ ++++I ++PD ++ F++ C G +H
Sbjct: 66 PVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHS 125
Query: 143 RVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGD 202
VL +G + F+ + L+++Y +CG+
Sbjct: 126 TVLKNGLHLDNFVCSTLVDMY----AKCGM------------------------------ 151
Query: 203 IDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSA 262
ID A ++FD MP +++V+ T MI+G A+ GK ++ LF++MRR D+VA+V ++A
Sbjct: 152 IDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNA 211
Query: 263 CAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRN 322
CA++G + + +H YV R + V L A+I MYA CG I+ + +F +M+++N
Sbjct: 212 CAKLGAMNKARLVHDYV----CARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKN 267
Query: 323 TVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFE 367
+SW++MI + G +EAL +TF+ +L ACSH G VD+G Q F
Sbjct: 268 VISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFS 327
Query: 368 CMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNA 427
M+ ++G++P ++HY CMVDL RAG +D+A L++NM ++ ++ + + L CRIH
Sbjct: 328 LMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGACRIHRQV 387
Query: 428 ELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWV 487
+LA + A+ L++ Q G+ L++N+YA A RW+DVA +R M K ++K PG +W+
Sbjct: 388 DLAEKAAKLLLSL--QTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKKIPGYTWI 445
Query: 488 QINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+++ +++ F AGD+++ +++ IY+ L ++ + GY PD + + ++E
Sbjct: 446 EVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYVPDTNSVLHDVDE 496
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 173/490 (35%), Positives = 274/490 (55%), Gaps = 32/490 (6%)
Query: 25 SLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTA 84
S+L + L + H +I+ GF ++ L+ Y G + A ++F+K
Sbjct: 171 SILPACTDLEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVV 230
Query: 85 IWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRV 144
WN MI G+ ++ E ++ L++++ + D T++ +++ A+CG ++ ++
Sbjct: 231 SWNAMIAGYVQNGLIEDALKLFQEIPKR----DVITWNTMMAGYAQCGDVENAVELFEKM 286
Query: 145 LASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDID 204
N+ ++ Y+ +G V A LF MP R+V+SWN+++ G+ + G ++
Sbjct: 287 PEQ----NLVSWNTMIAGYVQNGS---VKEAFKLFQIMPERNVISWNAVISGFAQNGQVE 339
Query: 205 GAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACA 264
A K+F MP NVVSW MI+G +QNG++ AL LF +M+ + + L ACA
Sbjct: 340 EALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACA 399
Query: 265 EIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTV 324
+ L+ G H V S + VLV N L+ MYA CG IE+A VF +M+++++
Sbjct: 400 ALAVLEQGNEAHEVVIR--SGFQSDVLVG--NTLVGMYAKCGSIEDARKVFDRMRQQDSA 455
Query: 325 SWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECM 369
S ++MI G+A G ++E+L +TF+GVLSAC H G VDEGRQ+F+ M
Sbjct: 456 SLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIM 515
Query: 370 NQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAEL 429
+ + I P +EHYGCM+DL RAG DEA L+ MP+KP+ + GSLL CR HNN +L
Sbjct: 516 TRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNNIDL 575
Query: 430 ASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQI 489
+VAQ L+A ++P+ A Y+ L++N+YAAA RW D+ +VR +M V+K G SW+ I
Sbjct: 576 GEKVAQHLIA-LNPQNPAPYV-LLSNIYAAAGRWDDIGSVRNRMKDRKVKKKLGCSWIVI 633
Query: 490 NGVLHDFVAG 499
+H F+ G
Sbjct: 634 KKQVHAFLVG 643
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 218/419 (52%), Gaps = 39/419 (9%)
Query: 25 SLLQIRNTTKTLFQ---IHSQIIINGFSQKNYILA-KLLAFYVTSGYLINAHKVFEKTEN 80
SLLQ K+L +H+ +I F ++ L KL++ YV G L+ A +VF++
Sbjct: 69 SLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPV 128
Query: 81 PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
+ W MI +AR E ++++ + +M D +P+ +T++ +L C + E
Sbjct: 129 KNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEVLGE---F 185
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKR 200
H ++ G+ SNVF+ L+++Y G C + AR LFD MP R VVSWN+++ GYV+
Sbjct: 186 HDEIVKGGFESNVFVGNGLVDMYAKRG--C-IEFARELFDKMPQRDVVSWNAMIAGYVQN 242
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
G I+ A K+F E+P R+V++W TM++G AQ G A+ LF +M + V+ +
Sbjct: 243 GLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNL----VSWNTMI 298
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
+ + G +K + F + E ++S NA+I +A G++EEA +F+ M
Sbjct: 299 AGYVQNGSVKEAFKL-------FQIMPERNVISW-NAVISGFAQNGQVEEALKLFKTMPE 350
Query: 321 RNTVSWTSMITGFAKQGYAQEALL---------------TFLGVLSACSHGGFVDEGRQF 365
N VSW +MI G+++ G A+ AL TF VL AC+ +++G +
Sbjct: 351 CNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEA 410
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
E + ++ G + + +V ++++ G +++A + M + + A L ++++G I+
Sbjct: 411 HEVVIRS-GFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQ-DSASLSAMIVGYAIN 467
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 173/519 (33%), Positives = 275/519 (52%), Gaps = 57/519 (10%)
Query: 36 LFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHAR 95
L + H++I G + IL K YV+ + A VFE NP + +WN MIRG A
Sbjct: 736 LKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFAT 795
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
S+ LY +M++K +PD++ + F L CA + G+ +H ++ G +++F+
Sbjct: 796 DGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFV 855
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
L+++Y K GDI+ A +FD+M
Sbjct: 856 DAALVDMY----------------------------------AKCGDIEAARLVFDKMAV 881
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
R++VSWT+MISG A NG + + L F+ MR + V ++V++++ L AC +G L+ G+W
Sbjct: 882 RDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWF 941
Query: 276 HSYVEENFSVGRE-PVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
HSYV G E +LV+ A++ MY+ CG ++ A +F + ++ V W++MI +
Sbjct: 942 HSYV---IQTGFEFDILVA--TAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYG 996
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
G+ ++A+ +TF VLSACSH G ++EG+ +F+ M + + I ++
Sbjct: 997 IHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKL 1056
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
+Y CMVDL RAG + EA L++NMP++P+ ++ GSLL CRIHNN +LA ++A L
Sbjct: 1057 SNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLF- 1115
Query: 440 EIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG 499
+DP AGY L++N+YAA RW +V VR+ M + G K G S V+ + +H F G
Sbjct: 1116 HLDPVH-AGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVG 1174
Query: 500 DSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
D ++ Q +Y L E+ GY P + IEE
Sbjct: 1175 DRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEE 1213
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 153/512 (29%), Positives = 253/512 (49%), Gaps = 58/512 (11%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H +I F ++ LL Y +G A +F K W+ MI +A +E
Sbjct: 228 VHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEA 287
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
+++ L+ +MI+K EP+ T L CA EG+++H + G+ + + T
Sbjct: 288 ANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTA 347
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
L+++Y+ +C D A +F +P ++V
Sbjct: 348 LIDMYM----KCSCP------------------------------DEAVDLFQRLPKKDV 373
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
VSW ++SG AQNG + +++ +F M + D VA+V L+A +E+G + +H Y
Sbjct: 374 VSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGY 433
Query: 279 V-EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
V F+ V + +LI +Y+ CG + +A +F+ M R+ V W+SMI + G
Sbjct: 434 VVRSGFNSN-----VFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHG 488
Query: 338 YAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
EAL +TFL +LSACSH G V+EG + F+ M ++ ++P EH
Sbjct: 489 RGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEH 548
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
+G MVDL R G + +A ++ MP+ V G+LL CRIH+N E+ A+ L +
Sbjct: 549 FGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFW-L 607
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
DP AGY L++N+YA +W +VA +R ++ + G++K GQS V++ G +H F+A D
Sbjct: 608 DPSH-AGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDR 666
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELF 533
+ + IY+ L ++ Q +E Y PD+ L
Sbjct: 667 FHPDSQKIYELLRKLEAQMGKEVYIPDLDFLL 698
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 189/412 (45%), Gaps = 62/412 (15%)
Query: 18 LTTRQIF-SLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFE 76
+ +RQ+ L Q N +++ Q+HSQ+ G + KL + Y L A KVF+
Sbjct: 1 MRSRQVLVDLFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFD 60
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETE-PDEYTYSFLLSVCARCGLFR 135
+T +P+ +WN +R + R + E+++ L+ MI E PD +T L CA +
Sbjct: 61 ETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLE 120
Query: 136 EGEQVHGRVLASGYC-SNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSL 193
G+ +HG + S++F+ + L+ LY +CG +G A +F++ V W S+
Sbjct: 121 LGKVIHGFAKKNDEIGSDMFVGSALVELY----SKCGQMGEALKVFEEFQRPDTVLWTSM 176
Query: 194 LKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR-VGLD 252
+ GY QN +AL+LF++M V LD
Sbjct: 177 VTGY-------------------------------QQNNDPEEALALFSQMVMMDCVVLD 205
Query: 253 QVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAY 312
V LV+ +SACA++ ++K G +H V G P++ N+L+++YA G + A
Sbjct: 206 PVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLV----NSLLNLYAKTGCEKIAA 261
Query: 313 GVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGG 357
+F KM ++ +SW++MI +A A EAL +T + L AC+
Sbjct: 262 NLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSR 321
Query: 358 FVDEGRQFFECMNQNW-GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
++EG++ + W G + ++D++ + DEA L Q +P K
Sbjct: 322 NLEEGKKIHKI--AVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKK 371
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 105/213 (49%), Gaps = 10/213 (4%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH + GF + L+ Y+ A +F++ W ++ G+A++
Sbjct: 328 KIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNG 387
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
KS+ +++ M+ +PD +L+ + G+F++ +HG V+ SG+ SNVF+
Sbjct: 388 MAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGA 447
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
+L+ LY +CG +G A LF M R VV W+S++ Y G A +IFD+M
Sbjct: 448 SLIELY----SKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKN 503
Query: 217 -----NVVSWTTMISGCAQNGKSRQALSLFNEM 244
N V++ +++S C+ G + L +F+ M
Sbjct: 504 STVRPNNVTFLSILSACSHAGLVEEGLKIFDRM 536
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 180/548 (32%), Positives = 280/548 (51%), Gaps = 86/548 (15%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPS----TAI-------- 85
QIH ++ G+ Y+ L++ Y +G L +AHKVF+++ + TA+
Sbjct: 87 QIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSG 146
Query: 86 -------------------WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLS 126
WN MI G+A + + ++++ L+K+M+ PDE T +LS
Sbjct: 147 NIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLS 206
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARS 186
CA+ G QVH + G+ SN+ I L++LY
Sbjct: 207 ACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLY----------------------- 243
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
K G ++ A +F+ + ++VVSW T+I G ++AL LF EM R
Sbjct: 244 -----------SKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLR 292
Query: 247 ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENF-SVGREPVLVSLNNALIHMYASC 305
+ + V +V+ L ACA +G + +G+WIH Y+++ V P SL +LI MYA C
Sbjct: 293 SGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAP---SLRTSLIDMYAKC 349
Query: 306 GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVL 350
G+IE A+ VF M ++ SW +MI GFA G A +TF+G+L
Sbjct: 350 GDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLL 409
Query: 351 SACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPN 410
SACSH G +D GR F+ M Q++ I P++EHYGCM+DL +GL EA +++ MPM+P+
Sbjct: 410 SACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPD 469
Query: 411 DAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVR 470
+ SLL CR H N ELA A+ L+ +++PE Y+ L++N+YA A W +VA VR
Sbjct: 470 GVIWCSLLKACRRHGNLELAESFARNLM-KVEPENPGSYV-LLSNIYATAGEWDEVAKVR 527
Query: 471 QKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
+ G++K PG S ++I+ +H+F+ GD + + IY L E+ + G+ PD S
Sbjct: 528 ALLNGKGMKKVPGCSSIEIDSEVHEFIVGDKLHPRNREIYGMLEEMEALLEEAGFVPDTS 587
Query: 531 ELFLGIEE 538
E+ +EE
Sbjct: 588 EVLQEMEE 595
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 143/487 (29%), Positives = 236/487 (48%), Gaps = 64/487 (13%)
Query: 56 AKLLAFYVTSGYLIN---AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDK 112
+KLL F V S + A VF + P+ IWN M+RG+A S P ++ LY MI
Sbjct: 1 SKLLEFCVLSPHFDGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISL 60
Query: 113 ETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV 172
P+ YT+ FLL CA+ F EG+Q+HG VL GY ++++ T+L+++Y +G +
Sbjct: 61 GLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNG---RL 117
Query: 173 GCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNG 232
A +FD R VVS+ +L+ GY G+I A ++FDE+P ++VVSW MISG A+ G
Sbjct: 118 EDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETG 177
Query: 233 KSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLV 292
++AL LF EM + V D+ +V LSACA+ ++LG+ +HS+++++ G +V
Sbjct: 178 SYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDH-GFGSNLKIV 236
Query: 293 SLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF------ 346
NALI +Y+ CG++E A G+F + ++ VSW ++I G+ +EALL F
Sbjct: 237 ---NALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRS 293
Query: 347 ---------LGVLSACSHGGFVDEGRQF------------------------------FE 367
+ +L AC+H G +D GR E
Sbjct: 294 GESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIE 353
Query: 368 CMNQ--NWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP---MKPNDAVLGSLLLGCR 422
+Q N + + + M+ F+ G + F L M ++P+D LL C
Sbjct: 354 AAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACS 413
Query: 423 IHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPP 482
+L + + + + D + + ++ + +++ ++MIK +P
Sbjct: 414 HSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEA----KEMIKTMPMEPD 469
Query: 483 GQSWVQI 489
G W +
Sbjct: 470 GVIWCSL 476
>gi|125546973|gb|EAY92795.1| hypothetical protein OsI_14599 [Oryza sativa Indica Group]
Length = 530
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 172/507 (33%), Positives = 271/507 (53%), Gaps = 35/507 (6%)
Query: 38 QIHSQIIINGFSQKN-YILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
IH ++ G ++ LL+ Y G +A ++F++ M R H S
Sbjct: 30 SIHCLLLKAGLLHVGAHLPTALLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARAHVAS 89
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLF----REGEQVHGRVLASGYCSN 152
+++ ++ M+ PD + L C G + G+ +H V+ SG +
Sbjct: 90 GQAAQAIAVFGDMVADGVFPDNVAVAVALGACHGAGSWTARRNPGKMIHALVVTSGIVPD 149
Query: 153 VFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFD 211
VF+ T L+ +Y GE G + +R +FDDMP+RS ++WN++L Y + G +D A+++F
Sbjct: 150 VFVSTELIRVY----GESGELPVSRRVFDDMPSRSTITWNAMLHQYARHGKVDTAYEMFL 205
Query: 212 EMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM---RRARVGLDQVALVAALSACAEIGD 268
MP R+VVSW T+++G G+ R+AL LF +M V + + L ACA G
Sbjct: 206 AMPRRDVVSWNTVLAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTMSTILGACAGAGC 265
Query: 269 LKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTV-SWT 327
L+ G W+H+Y+E N R L+ LI MY CG I+ A VF K R+ + SWT
Sbjct: 266 LETGIWVHAYIERN----RMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKKDLFSWT 321
Query: 328 SMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQN 372
++I G A G +AL +T +GVL+AC+HGG VDEG +F M
Sbjct: 322 TVICGLAMHGRTTDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAK 381
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQ 432
+ I P+IEHYGCM+DL R G + EA+S+++ MPM PN + G+ L C++H N EL
Sbjct: 382 FRITPKIEHYGCMIDLLGRIGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNMELGKI 441
Query: 433 VAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGV 492
A++L +DP+ G + +++++YA A+ W +A R++M M V+K PG S +++ G
Sbjct: 442 AAEELT-RLDPDDPWGRV-MLSSMYAKAQDWIGLARERREMNSMQVKKTPGCSSIELKGE 499
Query: 493 LHDFVAGDSTYKQASLIYKTLGEITMQ 519
+H+FVAG S + Q + I L ++ Q
Sbjct: 500 VHEFVAGGSQHPQYAEICSVLQDVEAQ 526
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 158/356 (44%), Gaps = 42/356 (11%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
M+ + + P N A + S RN K IH+ ++ +G ++ +L+
Sbjct: 102 MVADGVFPDNVAVAVALGACHGAGSWTARRNPGK---MIHALVVTSGIVPDVFVSTELIR 158
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y SG L + +VF+ + ST WN M+ +AR + + ++ M + D +
Sbjct: 159 VYGESGELPVSRRVFDDMPSRSTITWNAMLHQYARHGKVDTAYEMFLAMPRR----DVVS 214
Query: 121 YSFLLS---VCARC----GLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVG 173
++ +L+ V RC GLFR+ +++ C+ + N+ + + G G G
Sbjct: 215 WNTVLAGYCVAGRCREALGLFRQ-------MVSPSSCA---VHPNVPTMSTILGACAGAG 264
Query: 174 CARLLFDDMPARSVVSWN----------SLLKGYVKRGDIDGAWKIFDEMPH-RNVVSWT 222
C L + + + N L+ Y K G ID A ++F++ P +++ SWT
Sbjct: 265 C---LETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKKDLFSWT 321
Query: 223 TMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEEN 282
T+I G A +G++ AL +F+ M+ + D V LV L+ACA G + G +E
Sbjct: 322 TVICGLAMHGRTTDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAK 381
Query: 283 FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAKQG 337
F + + + +I + G ++EAY + R M NTV W + ++ G
Sbjct: 382 FRITPK---IEHYGCMIDLLGRIGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHG 434
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 166/521 (31%), Positives = 276/521 (52%), Gaps = 30/521 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H G ++ L+ Y + A +VF+ W + + +
Sbjct: 185 EVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCG 244
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
P K + ++++M +P+ T S +L CA + G+++HG + G N+F+ +
Sbjct: 245 FPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCS 304
Query: 158 NLMNLYLMSGGEC-GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L++LY +C V AR++FD MP R VVSWN +L Y K + + + +F +M
Sbjct: 305 ALVSLY----AKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRD 360
Query: 217 NV----VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
V +W +I GC +NG+S +A+ +F +M++ +++ + + L AC+ +L++G
Sbjct: 361 GVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMG 420
Query: 273 KWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
K IH YV ++ VG ++ AL++MYA CG++ + VF M+R++ V+W +MI
Sbjct: 421 KEIHCYVFRHWKVGD----LTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIA 476
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
A G +EAL +TF GVLS CSH V+EG Q F M ++ ++P
Sbjct: 477 NAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEP 536
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
HY C+VD++SRAG ++EA+ +Q MPM+P + G+LL CR++ N ELA A+KL
Sbjct: 537 DANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKL 596
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
EI+P Y++L N+ AK W + + VR M + G+ K PG SW+Q+ +H FV
Sbjct: 597 F-EIEPNNPGNYVSLF-NILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFV 654
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
GD + ++ IY L E+ + GYKPD + I++
Sbjct: 655 VGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQ 695
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 156/378 (41%), Gaps = 58/378 (15%)
Query: 57 KLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEP 116
+L+ + G A ++F+ P + +I +++ +Y + ++ +P
Sbjct: 103 RLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKP 162
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCA 175
D + CA G ++VH G S+VF+ L++ Y G+C V A
Sbjct: 163 DMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAY----GKCKCVEGA 218
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
R +FDD+ R VVSW SL YVK C G R
Sbjct: 219 RRVFDDLVVRDVVSWTSLSSCYVK----------------------------C---GFPR 247
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
+ + +F EM + V + + + + L ACAE+ DLK GK IH + + V V + +
Sbjct: 248 KGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMV----VNLFVC 303
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSH 355
+AL+ +YA C + EA VF M R+ VSW ++T + K ++ FL +
Sbjct: 304 SALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKM---SRD 360
Query: 356 GGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLG 415
G DE N G GCM + S + E F +Q M KPN+ +
Sbjct: 361 GVRADEA-----TWNAVIG--------GCMENGRSEEAV--EMFRKMQKMGFKPNEITIS 405
Query: 416 SLLLGCRIHNNAELASQV 433
S+L C N + ++
Sbjct: 406 SILPACSFSENLRMGKEI 423
>gi|326489701|dbj|BAK01831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 484
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 175/460 (38%), Positives = 253/460 (55%), Gaps = 41/460 (8%)
Query: 86 WNQMIRGHAR-SETPEKSVYLYKQMIDKETE-PDEYTYSFLLSVCA---RCGLFREGEQV 140
W I AR + P + L + P++ T +LS CA L R
Sbjct: 34 WTAAIARPAREGDLPATAAALSAMLSSPAAPAPNDVTLLTVLSACAGAPSSPLARPLALS 93
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL------LFDDMPARSVVSWNSLL 194
+ A + S++ + T L YL S RL LF M RS+V++N+++
Sbjct: 94 LHALAAKLFPSHLLLCTCLARFYLAS---------RLPHLALQLFGSMTVRSLVTYNTMI 144
Query: 195 KGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQV 254
G ++ G + A ++FD MP + VSWT +I GC +NG+ +A+ F+ M V D V
Sbjct: 145 TGLMRNGLVAAAREVFDGMPEPDKVSWTALIDGCVKNGRHDEAIDCFHAMLLDGVEPDYV 204
Query: 255 ALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGV 314
LVAA+SACAE+G L LG W+H V G + + N+LI MYA CG++E A V
Sbjct: 205 TLVAAISACAEVGALGLGMWVHRLVTRERLEGN----IRIANSLIDMYARCGQVEFARQV 260
Query: 315 FRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFV 359
F M+ R VSW SMI GFA G +A+ +TF GVL+ACSH G
Sbjct: 261 FDSMRNRTVVSWNSMIVGFAANGRCTDAIEHFEAMRRKGFRPDAVTFTGVLTACSHAGLT 320
Query: 360 DEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLL 419
DEG ++++ M GI R+EHYGC+VDL RAG + EA S+V MPM+PN+ VLG+LL
Sbjct: 321 DEGLRYYKAMRAEHGITARMEHYGCVVDLLGRAGRLGEAMSVVATMPMRPNEVVLGALLA 380
Query: 420 GCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVR 479
GCR+H + ++A Q+ Q L+ E DP + Y+ L++N+YAA +W VR M GV+
Sbjct: 381 GCRMHGDVDMAEQLMQHLL-EQDPGGDSNYV-LLSNIYAATGKWDGAGKVRGLMKARGVK 438
Query: 480 KPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
K PG+S V+I+G +H+FV GD ++ QA ++ LG ++ +
Sbjct: 439 KRPGRSAVEIDGDVHEFVCGDRSHPQADEVFDMLGLLSHE 478
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 13/214 (6%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
Q+ + + N ++ L+ +G + A +VF+ P W +I G ++
Sbjct: 126 LQLFGSMTVRSLVTYNTMITGLM----RNGLVAAAREVFDGMPEPDKVSWTALIDGCVKN 181
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
++++ + M+ EPD T +S CA G G VH V N+ I
Sbjct: 182 GRHDEAIDCFHAMLLDGVEPDYVTLVAAISACAEVGALGLGMWVHRLVTRERLEGNIRIA 241
Query: 157 TNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
+L+++Y CG V AR +FD M R+VVSWNS++ G+ G A + F+ M
Sbjct: 242 NSLIDMY----ARCGQVEFARQVFDSMRNRTVVSWNSMIVGFAANGRCTDAIEHFEAMRR 297
Query: 216 R----NVVSWTTMISGCAQNGKSRQALSLFNEMR 245
+ + V++T +++ C+ G + + L + MR
Sbjct: 298 KGFRPDAVTFTGVLTACSHAGLTDEGLRYYKAMR 331
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 5/162 (3%)
Query: 54 ILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKE 113
I L+ Y G + A +VF+ N + WN MI G A + ++ ++ M K
Sbjct: 240 IANSLIDMYARCGQVEFARQVFDSMRNRTVVSWNSMIVGFAANGRCTDAIEHFEAMRRKG 299
Query: 114 TEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-V 172
PD T++ +L+ C+ GL EG + + + A + R + G G +
Sbjct: 300 FRPDAVTFTGVLTACSHAGLTDEGLRYYKAMRAE---HGITARMEHYGCVVDLLGRAGRL 356
Query: 173 GCARLLFDDMPAR-SVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
G A + MP R + V +LL G GD+D A ++ +
Sbjct: 357 GEAMSVVATMPMRPNEVVLGALLAGCRMHGDVDMAEQLMQHL 398
Score = 42.0 bits (97), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 91/241 (37%), Gaps = 27/241 (11%)
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEM------PHRNVVSWTTMISGCAQNGKSRQALS 239
VVSW + + + GD+ M P N V+ T++S CA S
Sbjct: 30 DVVSWTAAIARPAREGDLPATAAALSAMLSSPAAPAPNDVTLLTVLSACAGAPSS----P 85
Query: 240 LFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
L + + L + L C + L + + F LV+ N +
Sbjct: 86 LARPLALSLHALAAKLFPSHLLLCTCLARFYLASRLPHLALQLFGSMTVRSLVTYNTMIT 145
Query: 300 HMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------L 344
+ + G + A VF M + VSWT++I G K G EA+ +
Sbjct: 146 GLMRN-GLVAAAREVFDGMPEPDKVSWTALIDGCVKNGRHDEAIDCFHAMLLDGVEPDYV 204
Query: 345 TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQN 404
T + +SAC+ G + G + + ++ I ++D+++R G ++ A + +
Sbjct: 205 TLVAAISACAEVGALGLGMWVHRLVTRER-LEGNIRIANSLIDMYARCGQVEFARQVFDS 263
Query: 405 M 405
M
Sbjct: 264 M 264
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 167/516 (32%), Positives = 275/516 (53%), Gaps = 55/516 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IHS+++ +GF + L++ Y G + +A +F K W MI G A+S
Sbjct: 467 EIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSG 526
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ +++ M +P+ TY+ +L+ C+ G ++H +V+ +G ++ +
Sbjct: 527 LGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVAN 586
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+N+Y M G + A ++FD M R+
Sbjct: 587 TLVNMYSMCGS----------------------------------VKDARQVFDRMTQRD 612
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+V++ MI G A + ++AL LF+ ++ + D+V + L+ACA G L+ K IHS
Sbjct: 613 IVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHS 672
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
V ++ + SL NAL+ YA CG +A VF KM +RN +SW ++I G A+ G
Sbjct: 673 LVLKDGYLSD----TSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHG 728
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
Q+ L +TF+ +LSACSH G ++EGR++F M++++GI P IEHY
Sbjct: 729 RGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHY 788
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
GCMVDL RAG +DE +L++ MP + N + G+LL CRIH N +A + A+ + ++D
Sbjct: 789 GCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSL-KLD 847
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P+ AA Y+AL +++YAAA W A +R+ M + GV K PG+SW+++ LH FVA D +
Sbjct: 848 PDNAAVYVAL-SHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRS 906
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ ++ IY L ++T EGY PD + ++E
Sbjct: 907 HPESEKIYAELDKLTHAMKMEGYVPDTRSVMHDVDE 942
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 194/423 (45%), Gaps = 58/423 (13%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+HS I+ G + L+ Y G + +VFEK N WN MI G A
Sbjct: 367 VHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGN 426
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
E++ +Y QM + P++ TY LL+ C G ++H RV+ G+ ++ ++
Sbjct: 427 WEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNA 486
Query: 159 LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y CG + ARLLF+ M + ++SW
Sbjct: 487 LISMY----ARCGSIKDARLLFNKMVRKDIISW--------------------------- 515
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
T MI G A++G +AL++F +M++A + ++V + L+AC+ L G+ IH
Sbjct: 516 ----TAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQ 571
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
V E V N L++MY+ CG +++A VF +M +R+ V++ +MI G+A
Sbjct: 572 QVIEAGLATDAHVA----NTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHN 627
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+EAL +T++ +L+AC++ G ++ ++ + ++ G
Sbjct: 628 LGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKD-GYLSDTSLG 686
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE-I 441
+V +++ G +A LV + MK N +++ GC H + Q+ +++ E I
Sbjct: 687 NALVSTYAKCGSFSDAL-LVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGI 745
Query: 442 DPE 444
P+
Sbjct: 746 KPD 748
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 129/541 (23%), Positives = 224/541 (41%), Gaps = 105/541 (19%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI--WNQMIRGHAR 95
++H II + Y + L+ Y+ G + A +V+ K + + WN M+ G+ +
Sbjct: 162 EVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQ 221
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
E+++ L ++M T LLS C G ++H +
Sbjct: 222 YGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMK--------- 272
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
ARLLFD A N +L Y K G I A ++FD+M
Sbjct: 273 -------------------ARLLFDVNVA------NCILNMYAKCGSIHEAREVFDKMET 307
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
++VVSWT +I G A G S A +F +M++ V +++ + L+A + LK GK +
Sbjct: 308 KSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTV 367
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
HS++ + G E L ++ AL+ MYA CG ++ VF K+ R+ ++W +MI G A+
Sbjct: 368 HSHI---LNAGHESDL-AVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAE 423
Query: 336 QGYAQEA---------------LLTFLGVLSACSHGGFVDEGRQF----------FECMN 370
G +EA +T++ +L+AC + + GR+ F+
Sbjct: 424 GGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISV 483
Query: 371 QNWGI--------------------KPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP---M 407
QN I + I + M+ +++GL EA ++ Q+M +
Sbjct: 484 QNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGL 543
Query: 408 KPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVA 467
KPN S+L C + ++ Q+++ E A + N+Y+ +D
Sbjct: 544 KPNRVTYTSILNACSSPAALDWGRRIHQQVI-EAGLATDAHVANTLVNMYSMCGSVKDAR 602
Query: 468 AVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
V +M + + V N ++ + A + K+A ++ L E EG KP
Sbjct: 603 QVFDRMTQRDI--------VAYNAMIGGY-AAHNLGKEALKLFDRLQE-------EGLKP 646
Query: 528 D 528
D
Sbjct: 647 D 647
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 119/252 (47%), Gaps = 29/252 (11%)
Query: 232 GKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL 291
GK R A+ + +++ ++ + L C E+ DL G+ +H ++ ++ +V + +
Sbjct: 121 GKDR-AMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTV 179
Query: 292 VSLNNALIHMYASCGEIEEAYGVFRKMQR--RNTVSWTSMITGFAKQGYAQEAL------ 343
NALI+MY CG IEEA V+ K+ R SW +M+ G+ + GY +EAL
Sbjct: 180 ----NALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREM 235
Query: 344 ---------LTFLGVLSACSHGGFVDEGRQF-FECMNQNWGIKPRIEHYGCMVDLFSRAG 393
T + +LS+C ++ GR+ E M + + C+++++++ G
Sbjct: 236 QQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVAN--CILNMYAKCG 293
Query: 394 LMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH-NNAELASQVAQKLVAE-IDPEQAAGYLA 451
+ EA + M K V ++++G ++E+A ++ QK+ E + P +
Sbjct: 294 SIHEAREVFDKMETKS--VVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINV 351
Query: 452 LVANVYAAAKRW 463
L A AA +W
Sbjct: 352 LNAFSGPAALKW 363
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 180/544 (33%), Positives = 292/544 (53%), Gaps = 81/544 (14%)
Query: 19 TTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKT 78
TT I +LL+ TT TL Q+H++II G Q ++I+++ L + VF
Sbjct: 24 TTSSISTLLKACTTTSTLEQVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNGV 83
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA--------- 129
+PST +WN I+G++ + + +V L+ +M + PD++TY L+ C+
Sbjct: 84 SSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGV 143
Query: 130 -------RCGL--------------------------FRE-GEQ--VHGRVLASGYCS-- 151
RCG+ F E GE+ V + +GY S
Sbjct: 144 AFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFS 203
Query: 152 ---------NVFIRTNLMNLYLMSGG--ECG-VGCARLLFDDMPARSVVSWNSLLKGYVK 199
+ N ++ + G +CG + AR +FD+MP R+VVS+ +++ GY K
Sbjct: 204 DLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYAK 263
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
GD+ A +F+E P R+VV+W+ +ISG QNG+ +A+ +F EM V D+ +V+
Sbjct: 264 SGDMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPDEFIMVSL 323
Query: 260 LSACAEIGDLKLGKWIHSYVEE-NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM 318
+SAC+++G L+L KW+ YV + + V R V+ ALI M A CG ++ A +F +M
Sbjct: 324 MSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIA----ALIDMNAKCGSMDRATKLFEEM 379
Query: 319 QRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGR 363
+R+ +S+ SM+ G + G +A+ + F +L+ACS G VDEG
Sbjct: 380 PKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGC 439
Query: 364 QFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRI 423
+FE M ++ I P +HY CMVDL RAG + EA+ L+++MP++P+ G+LL C++
Sbjct: 440 YYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKL 499
Query: 424 HNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPG 483
H + EL VA +L E++P+ A Y+ L++N+YAAA++W DV+ +R KM + G+RK PG
Sbjct: 500 HCDIELGEVVADQLF-ELEPQNAGNYV-LLSNIYAAAEQWLDVSLLRNKMRERGIRKIPG 557
Query: 484 QSWV 487
SW+
Sbjct: 558 CSWI 561
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 166/521 (31%), Positives = 276/521 (52%), Gaps = 30/521 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H G ++ L+ Y + A +VF+ W + + +
Sbjct: 99 EVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCG 158
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
P K + ++++M +P+ T S +L CA + G+++HG + G N+F+ +
Sbjct: 159 FPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCS 218
Query: 158 NLMNLYLMSGGEC-GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L++LY +C V AR++FD MP R VVSWN +L Y K + + + +F +M
Sbjct: 219 ALVSLY----AKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRD 274
Query: 217 NV----VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
V +W +I GC +NG+S +A+ +F +M++ +++ + + L AC+ +L++G
Sbjct: 275 GVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMG 334
Query: 273 KWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
K IH YV ++ VG ++ AL++MYA CG++ + VF M+R++ V+W +MI
Sbjct: 335 KEIHCYVFRHWKVGD----LTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIA 390
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
A G +EAL +TF GVLS CSH V+EG Q F M ++ ++P
Sbjct: 391 NAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEP 450
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
HY C+VD++SRAG ++EA+ +Q MPM+P + G+LL CR++ N ELA A+KL
Sbjct: 451 DANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKL 510
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
EI+P Y++L N+ AK W + + VR M + G+ K PG SW+Q+ +H FV
Sbjct: 511 F-EIEPNNPGNYVSLF-NILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFV 568
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
GD + ++ IY L E+ + GYKPD + I++
Sbjct: 569 VGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQ 609
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 156/378 (41%), Gaps = 58/378 (15%)
Query: 57 KLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEP 116
+L+ + G A ++F+ P + +I +++ +Y + ++ +P
Sbjct: 17 RLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKP 76
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCA 175
D + CA G ++VH G S+VF+ L++ Y G+C V A
Sbjct: 77 DMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAY----GKCKCVEGA 132
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
R +FDD+ R VVSW SL YVK C G R
Sbjct: 133 RRVFDDLVVRDVVSWTSLSSCYVK----------------------------C---GFPR 161
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
+ + +F EM + V + + + + L ACAE+ DLK GK IH + + V V + +
Sbjct: 162 KGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMV----VNLFVC 217
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSH 355
+AL+ +YA C + EA VF M R+ VSW ++T + K ++ FL +
Sbjct: 218 SALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKM---SRD 274
Query: 356 GGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLG 415
G DE N G GCM + S + E F +Q M KPN+ +
Sbjct: 275 GVRADEAT-----WNAVIG--------GCMENGRSEEAV--EMFRKMQKMGFKPNEITIS 319
Query: 416 SLLLGCRIHNNAELASQV 433
S+L C N + ++
Sbjct: 320 SILPACSFSENLRMGKEI 337
>gi|224136482|ref|XP_002326871.1| predicted protein [Populus trichocarpa]
gi|222835186|gb|EEE73621.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 189/580 (32%), Positives = 297/580 (51%), Gaps = 98/580 (16%)
Query: 21 RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLI---NAHKVFE- 76
R+ LLQ T KTL QIH+ I+ N IL K F T G L +A +F+
Sbjct: 3 RECLFLLQRCRTRKTLLQIHALILRNAIDANVNILTK---FITTCGQLSSTRHARHLFDN 59
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKET--EPDEYTYSFLLSVCARCGLF 134
++ T + N MI+ H + LYK + +ET PD +T++ L CA
Sbjct: 60 RSHRGDTFLCNSMIKSHVVMRQLADAFTLYKDL-RRETCFVPDNFTFTVLAKCCALRMAV 118
Query: 135 REGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLL 194
EG + HG V+ G+C ++++ T L+++Y G +G AR +F+DMP RS+VSW +L+
Sbjct: 119 WEGLETHGHVVKIGFCFDMYVSTALVDMYAKFGN---LGLARKVFNDMPDRSLVSWTALI 175
Query: 195 KGYVKRGDIDGAW-------------------------------KIFDEMPHRNVVSWTT 223
GYV+RGD+ AW +FDEMP RNV+SWT+
Sbjct: 176 GGYVRRGDMGNAWFLFKLMPGRDSAAFNLLIDGYVKVGDMESARSLFDEMPERNVISWTS 235
Query: 224 MISGCAQNG-------------------------------KSRQALSLFNEMRRARV-GL 251
MI G NG + +AL LF E++ + V
Sbjct: 236 MIYGYCNNGDVLSARFLFDAMPEKNLVSWNAMIGGYCQNKQPHEALKLFRELQSSTVFEP 295
Query: 252 DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEA 311
++V +V+ L A A +G L+LG+W+H +V+ + V++ +L+ MY CGEI +A
Sbjct: 296 NEVTVVSILPAIATLGALELGEWVHRFVQRK----KLDAAVNVCTSLVDMYLKCGEISKA 351
Query: 312 YGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHG 356
VF ++ ++ T +W ++I GFA G A EAL +T GVLSACSHG
Sbjct: 352 RKVFSEIPKKETATWNALINGFAMNGLASEALEAFSEMQQEGIKPNDITMTGVLSACSHG 411
Query: 357 GFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGS 416
G V+EG+ F+ M ++ G+ P+IEHYGC+VDL RAG +DEA +L+++MP + N +L S
Sbjct: 412 GLVEEGKGQFKAMIES-GLSPKIEHYGCLVDLLGRAGCLDEAENLIKSMPFEANGIILSS 470
Query: 417 LLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKM 476
C N+ A +V + V ++P Y+ ++ N+YA +RW+DV + M +
Sbjct: 471 FSFACGFSNDVTRAQRVLNQAV-NMEPGNNGIYV-MMRNLYAMEERWKDVKEINGLMRRR 528
Query: 477 GVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEI 516
G +K G S ++++ + +F++G + Q +I +G++
Sbjct: 529 GAKKEVGSSAIEVDSRVSEFISGGIAHPQLDVIESVIGQL 568
>gi|357487459|ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355515352|gb|AES96975.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 525
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 174/527 (33%), Positives = 285/527 (54%), Gaps = 36/527 (6%)
Query: 19 TTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY----LINAHKV 74
+T++ LL+ + K L Q H+Q+ G + L+++LAF + + L A +V
Sbjct: 4 STKRCLVLLEKCKSMKHLKQAHAQVFTTGLENNTFALSRVLAFCSSHKHHHESLTYACRV 63
Query: 75 FEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLF 134
FE+ +NP+ I+N +I+ + + ++ ++ +M+ E +PD YT ++L C G F
Sbjct: 64 FEQIQNPTVCIYNTLIKAFLVNNKFKSALQVFVKMLQSELKPDNYTIPYVLKAC---GTF 120
Query: 135 RE---GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWN 191
+ G+ +HG G ++++ +LM +Y + G V AR +FD++P+ +VVSW+
Sbjct: 121 HDCSFGKMIHGYSSKLGLVFDIYVGNSLMAMYCVFGD---VVAARYVFDEIPSLNVVSWS 177
Query: 192 SLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL 251
++ GY K GD+D A FDE P ++ W MISG QN +++L LF M+ +
Sbjct: 178 VMISGYAKVGDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVP 237
Query: 252 DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEA 311
D+ V+ LSACA +G L++G WIH ++ + + P+ V L+ +L+ MYA CG +E A
Sbjct: 238 DESIFVSILSACAHLGALEIGVWIHQHLNQ---LKLVPLSVRLSTSLLDMYAKCGNLELA 294
Query: 312 YGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHG 356
+F M R+ V W +MI+G A G + AL +TF+ V +ACS+
Sbjct: 295 KRLFDSMNMRDVVCWNAMISGMAMHGDGKGALKLFYDMEKVGVKPDDITFIAVFTACSYS 354
Query: 357 GFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDA---- 412
G EG + M + I P+ EHYGC+VDL SRAGL +EA +++ + N +
Sbjct: 355 GMAYEGLMLLDKMCSVYNIVPKSEHYGCLVDLLSRAGLFEEAMVMIRKITNSWNGSEETL 414
Query: 413 VLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQK 472
+ L C H +LA A+K V ++D +G L++N+YAA+ + D VR
Sbjct: 415 AWRAFLSACCNHGETQLAELAAEK-VLQLDNHIHSGVYVLLSNLYAASGKHSDARRVRDM 473
Query: 473 MIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
M G K PG S V+I+GV+ +F+AG+ T+ Q I+ L ++ MQ
Sbjct: 474 MKIKGTNKAPGCSSVEIDGVISEFIAGEKTHPQMEEIHSVLKKMHMQ 520
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 170/516 (32%), Positives = 267/516 (51%), Gaps = 55/516 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H++ + ++L LL+ Y G L A +VF++ +PST W +I + +
Sbjct: 92 QLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAG 151
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++V++ + PD +T +L+ CAR GE V G +VF+ T
Sbjct: 152 DLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVAT 211
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
++LY VK G++ A ++FD+M H++
Sbjct: 212 AAVDLY----------------------------------VKCGEMAKAREVFDKMRHKD 237
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
V+W M+ G A NG R+AL LF M+ + D A+ ALSAC +G L LG+
Sbjct: 238 AVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIR 297
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
V+ + + PVL ALI MYA CG EA+ VF++M++++ + W +MI G G
Sbjct: 298 MVDWDEFLD-NPVL---GTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTG 353
Query: 338 YAQEALL---------------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+ + A TF+G+L +C+H G + +GR++F M + + I PRIEHY
Sbjct: 354 HEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHY 413
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
GCMVDL SRAGL+ EA LV +MPM N +LG+LL GC+IH N ELA V ++L+ ++
Sbjct: 414 GCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLIL-LE 472
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P + Y+ +++N+Y+ RW+D A +R M GV K P SWV+ G +H+F GD +
Sbjct: 473 PWNSGNYV-MLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKS 531
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ + IYK L E+ ++ GY+P + +E+
Sbjct: 532 HPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVED 567
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 165/519 (31%), Positives = 291/519 (56%), Gaps = 28/519 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H II G Q + L+ Y G + +A +F + + W ++ + ++
Sbjct: 24 KLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQAN 83
Query: 98 TPEKSVYLYKQMIDKE-TEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
P ++ ++ M ++ +PD Y ++ L+ CA G ++G+QVH + S + ++
Sbjct: 84 LPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVK 143
Query: 157 TNLMNLYLMSGGECGV-GCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
++L+++Y +CG+ R++FD + +++ +SW +++ GY + G A ++F +MP
Sbjct: 144 SSLVDMY----AKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPV 199
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL-DQVALVAALSACAEIGDLKLGKW 274
+N++SWT +ISG Q+G + LF EMR + + D L + + A A + L LGK
Sbjct: 200 KNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQ 259
Query: 275 IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
IH V +G E L ++NAL+ MYA C ++ A +F +M +R+ VSWTS+I G A
Sbjct: 260 IHCLV---ILLGYESSLF-VSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTA 315
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
+ G A+EAL +TF+G++ ACSH G V +GR FF M +++GI P +
Sbjct: 316 QHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSL 375
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
+HY C++DL SR+G ++EA +L++ MP KP++A +LL C H N + +VA L++
Sbjct: 376 QHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLS 435
Query: 440 EIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG 499
+ PE + Y+ L++N+YA+A W+ V+ VR+ M M V+K PG S + + F+AG
Sbjct: 436 -LKPEDPSTYI-LLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLGKESQVFLAG 493
Query: 500 DSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++++ I+ L E+ + + GY PD S + +E+
Sbjct: 494 ETSHPAKEEIFGLLEELDAEMKKRGYIPDTSSVLHDLEQ 532
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 41/226 (18%)
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDD 181
+ L CAR G+++H ++ +G + NL+N+Y G+CG + A LF+
Sbjct: 8 YQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMY----GKCGLIQDALNLFNQ 63
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
+P R +SW S+L + +PH LS+F
Sbjct: 64 LPHRDPISWASILTANNQA-----------NLPHLT--------------------LSMF 92
Query: 242 NEM-RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIH 300
M ++ + D + ACA +G +K GK +H+ F V + ++L+
Sbjct: 93 PAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHA----TFIVSPVSDDDVVKSSLVD 148
Query: 301 MYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
MYA CG + VF + +N++SWT+MI+G+A+ G +A+ F
Sbjct: 149 MYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLF 194
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 27/160 (16%)
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
LV L ACA +GK +H ++ G + SL+N LI+MY CG I++A +F
Sbjct: 6 LVYQLQACARHQSPPIGKKLHCHI---IKTGIDQC-KSLSNNLINMYGKCGLIQDALNLF 61
Query: 316 RKMQRRNTVSWTSMIT----------------GFAKQGYAQEALLTFLGVLSACSHGGFV 359
++ R+ +SW S++T KQ Q F ++ AC+ G +
Sbjct: 62 NQLPHRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAM 121
Query: 360 DEGRQFFECMNQNWGIKPRIEH---YGCMVDLFSRAGLMD 396
+G+Q ++ + + P + +VD++++ GL D
Sbjct: 122 KQGKQ----VHATFIVSPVSDDDVVKSSLVDMYAKCGLPD 157
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 177/500 (35%), Positives = 277/500 (55%), Gaps = 28/500 (5%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKET-EP 116
+++ Y G + A +FE S WN +I G+ ++ ++ + +M+ + EP
Sbjct: 419 MVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEP 478
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCAR 176
D +T + +LS CA + + G+Q+H +L +G + I L++ Y SG V AR
Sbjct: 479 DAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGS---VETAR 535
Query: 177 LLFDD--MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
+ D + +V+S+ +LL+GYVK GD A +IFD M +R+V++WT MI G QNG++
Sbjct: 536 RIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQN 595
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
+A+ LF M + L A LSACA + L GK IH + + VS+
Sbjct: 596 DEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSL----QEQSVSV 651
Query: 295 NNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAKQGYAQEAL---------- 343
+NA+I +YA G + A VF ++ R+ T++WTSMI A+ G ++A+
Sbjct: 652 SNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVG 711
Query: 344 -----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEA 398
+T++GVLSAC+H GFVD+G++++E M GI P++ HY CMVDL +RAGL+ EA
Sbjct: 712 VKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEA 771
Query: 399 FSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYA 458
+Q MP+ P+ V GSLL CR+ NA+LA A KL++ IDP + Y AL ANVY+
Sbjct: 772 HEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLS-IDPHNSGAYSAL-ANVYS 829
Query: 459 AAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITM 518
A RW D A + + GV+K G SW + G +H F A D + Q IY+ E+
Sbjct: 830 ACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRDSIYRKAAEMWE 889
Query: 519 QAMQEGYKPDISELFLGIEE 538
+ + G+ PD++ + +++
Sbjct: 890 EIKKAGFVPDLNSVLHDVDD 909
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 123/422 (29%), Positives = 201/422 (47%), Gaps = 48/422 (11%)
Query: 48 FSQKN-YILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLY 106
++++N + LL+ Y SG L +AH VF + + W MI G RS +V +
Sbjct: 276 YARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTF 335
Query: 107 KQMIDKETEPDEYTYSFLLSVCAR---CGLFREGEQVHGRVLASGYCSNVFIRTNLMNLY 163
M+ + P ++T + +LS CA CG+ G +VH V+ G S V + +++ +Y
Sbjct: 336 LDMVSEGFAPSQFTLTNVLSSCAAMEACGV---GRKVHPFVVKLGLSSCVPVANSVLYMY 392
Query: 164 LMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWT 222
G+CG AR +F+ M RSV SWN ++ Y +G ++ A +F+ M R++VSW
Sbjct: 393 ----GKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWN 448
Query: 223 TMISGCAQNGKSRQALSLFNEMRRA-RVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE 281
T+I+G QNG AL F+ M A + D + + LSACA + LK+GK +HSY+
Sbjct: 449 TIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYI-- 506
Query: 282 NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK--MQRRNTVSWTSMITGFAKQGYA 339
G P + NALI YA G +E A + + + N +S+T+++ G+ K G
Sbjct: 507 -LRTGM-PCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDT 564
Query: 340 QEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAF 399
++A R+ F+ MN I + M+ + + G DEA
Sbjct: 565 KQA--------------------REIFDIMNNRDVIA-----WTAMIVGYHQNGQNDEAM 599
Query: 400 SLVQNMPM---KPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANV 456
L ++M + +PN L ++L C + Q+ K + + EQ+ + V
Sbjct: 600 ELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQ-EQSVSVSNAIITV 658
Query: 457 YA 458
YA
Sbjct: 659 YA 660
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 116/231 (50%), Gaps = 11/231 (4%)
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGC---ARL 177
Y+ LL +C G +H + +G + ++ NL+ Y G GC AR
Sbjct: 212 YARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVG--VSRGCFREARC 269
Query: 178 LFDDMP--ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
LFDD+P R+ +WNSLL Y K G + A +F EMP R+ VSWT MI G ++G+
Sbjct: 270 LFDDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFW 329
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
A+ F +M Q L LS+CA + +G+ +H +V +G V +
Sbjct: 330 DAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFV---VKLGLSSC-VPVA 385
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
N++++MY CG+ E A VF +MQ R+ SW M++ + QG + A+ F
Sbjct: 386 NSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMF 436
>gi|347954494|gb|AEP33747.1| chloroplast biogenesis 19, partial [Brassica oleracea]
Length = 485
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 177/464 (38%), Positives = 279/464 (60%), Gaps = 30/464 (6%)
Query: 72 HKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARC 131
H+ ++ + +T W I +R+ ++ + M EP+ T LLS CA C
Sbjct: 18 HQKLNQSTSETTVSWTSRITLLSRNGRLAEAAKEFTAMRLAGVEPNHITLIALLSGCADC 77
Query: 132 GLFREGEQVHGRVLASGYCSN-VFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSW 190
F G+ +HG G N V + T ++ +Y ARL+FD + ++ V+W
Sbjct: 78 EPF--GDSLHGYACKLGLDRNQVMVGTAILGMY---SKRRRFRKARLVFDRVEDKNSVTW 132
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG 250
N+++ GY++ G +D A K+FDEMP R+++SWT MI+G + G +AL+ F EM+ + V
Sbjct: 133 NTMIDGYMRSGRVDDAAKVFDEMPERDLISWTAMINGFVKKGLHEEALAWFREMQVSGVK 192
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYV-EENFSVGREPVLVSLNNALIHMYASCGEIE 309
D VA++AAL+ACA +G L G W+H +V ++F V ++N+LI +Y CG +E
Sbjct: 193 PDYVAVIAALAACANLGALSFGLWVHRFVVSQDFKNN-----VRVSNSLIDLYCRCGCVE 247
Query: 310 EAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALL---------------TFLGVLSACS 354
A VF +M++R VSW S+I GFA G+A E+L+ TF G L+ACS
Sbjct: 248 FARQVFDEMEKRTVVSWNSVIVGFAANGHAHESLVYFRRMQEERFKPDAVTFTGALTACS 307
Query: 355 HGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL 414
H G V+EG ++FE M +++ I PRIEHYGC+VDL+SRAG ++EA +V++MPMKPN+ V+
Sbjct: 308 HVGLVEEGVRYFEAMKRDYRISPRIEHYGCLVDLYSRAGRLEEALKVVESMPMKPNEVVI 367
Query: 415 GSLLLGCRIH-NNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKM 473
GSLL CR H N+ ELA ++ ++L +E+ + + Y+ L +N+YAA +W+ + +R+KM
Sbjct: 368 GSLLAACRTHGNDTELAERMMKRL-SELKVKGHSNYVIL-SNMYAADGQWEGASKMRRKM 425
Query: 474 IKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEIT 517
+G++K PG S ++I+ H F+AGDS + + I + L I+
Sbjct: 426 KGLGLKKQPGFSSIEIDDRTHVFMAGDSAHVENGYIREVLELIS 469
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 139/327 (42%), Gaps = 48/327 (14%)
Query: 41 SQIIINGFSQKNYIL-AKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
++++ + KN + ++ Y+ SG + +A KVF++ W MI G +
Sbjct: 117 ARLVFDRVEDKNSVTWNTMIDGYMRSGRVDDAAKVFDEMPERDLISWTAMINGFVKKGLH 176
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
E+++ +++M +PD L+ CA G G VH V++ + +NV + +L
Sbjct: 177 EEALAWFREMQVSGVKPDYVAVIAALAACANLGALSFGLWVHRFVVSQDFKNNVRVSNSL 236
Query: 160 MNLYLMSGGECGVGC---ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
++LY C GC AR +FD+M R+VVSWNS++ G+
Sbjct: 237 IDLY------CRCGCVEFARQVFDEMEKRTVVSWNSVIVGF------------------- 271
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
A NG + ++L F M+ R D V AL+AC+ +G ++ G
Sbjct: 272 ------------AANGHAHESLVYFRRMQEERFKPDAVTFTGALTACSHVGLVEEGVRYF 319
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAK 335
++ ++ + + L+ +Y+ G +EEA V M + N V S++
Sbjct: 320 EAMKRDYRISPR---IEHYGCLVDLYSRAGRLEEALKVVESMPMKPNEVVIGSLLAACRT 376
Query: 336 QGYAQ---EALLTFLGVLSACSHGGFV 359
G E ++ L L H +V
Sbjct: 377 HGNDTELAERMMKRLSELKVKGHSNYV 403
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H ++ F + L+ Y G + A +VF++ E + WN +I G A +
Sbjct: 217 VHRFVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDEMEKRTVVSWNSVIVGFAANGH 276
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+S+ +++M ++ +PD T++ L+ C+ GL EG
Sbjct: 277 AHESLVYFRRMQEERFKPDAVTFTGALTACSHVGLVEEG 315
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 174/528 (32%), Positives = 279/528 (52%), Gaps = 58/528 (10%)
Query: 24 FSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV---TSGYLINAHKVFEKTEN 80
SLL + L QI + I +L KL+ F T+ Y+ +AH +F++ +
Sbjct: 33 LSLLSKCTSLNELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILD 92
Query: 81 PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
++N M RG+ARS +P + L+ +++ PD+YT+S LL CA REG +
Sbjct: 93 KDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGL 152
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKR 200
H + G N++I L+N+Y EC
Sbjct: 153 HCFAVKLGLNHNIYICPTLINMY----AECN----------------------------- 179
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
D++ A +FDEM +VS+ +I+G A++ + +ALSLF E++ + + V +++ +
Sbjct: 180 -DMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVI 238
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
+CA +G L LGKWIH YV++ G + V +N ALI M+A CG + +A +F M+
Sbjct: 239 MSCALLGALDLGKWIHEYVKKK---GFDKY-VKVNTALIDMFAKCGSLTDAISIFEGMRV 294
Query: 321 RNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQF 365
R+T +W++MI FA G +A+ +TFLG+L ACSH G V++GR +
Sbjct: 295 RDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGY 354
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHN 425
F M++ +GI P I+HYGCMVDL RAG +DEA++ V + +K + +LL C H
Sbjct: 355 FYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHG 414
Query: 426 NAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQS 485
N E+A +V +++ E+D Y+ L +N+YA RW+DV +R+ M GV K PG S
Sbjct: 415 NVEMAKRVIERIF-ELDDAHGGDYVIL-SNLYARVGRWEDVNHLRKLMKDRGVVKVPGCS 472
Query: 486 WVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELF 533
V++N V+H+F +GD + + + + L E+ + GY PD S ++
Sbjct: 473 SVEVNNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVY 520
>gi|15241651|ref|NP_196468.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171895|sp|Q9FNN7.1|PP371_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08510
gi|9759345|dbj|BAB10000.1| unnamed protein product [Arabidopsis thaliana]
gi|50897238|gb|AAT85758.1| At5g08510 [Arabidopsis thaliana]
gi|332003930|gb|AED91313.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 511
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 169/497 (34%), Positives = 275/497 (55%), Gaps = 31/497 (6%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H+ + G + +L +LL L+ A K+F+ +N T ++N++I+ +
Sbjct: 6 QLHAHCLRTGVDETKDLLQRLLLI----PNLVYARKLFDHHQNSCTFLYNKLIQAYYVHH 61
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
P +S+ LY + P +T++F+ + A R +H + SG+ S+ F T
Sbjct: 62 QPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCT 121
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+ Y G C CAR +FD+M R V WN+++ GY +RGD+ A ++FD MP +N
Sbjct: 122 TLITAYAKLGALC---CARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKN 178
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRAR-VGLDQVALVAALSACAEIGDLKLGKWIH 276
V SWTT+ISG +QNG +AL +F M + + V + + +V+ L ACA +G+L++G+ +
Sbjct: 179 VTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLE 238
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAK 335
Y EN + + NA I MY+ CG I+ A +F ++ +RN SW SMI A
Sbjct: 239 GYARENGFFDN----IYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLAT 294
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
G EAL +TF+G+L AC HGG V +G++ F+ M + I P++E
Sbjct: 295 HGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLE 354
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HYGCM+DL R G + EA+ L++ MPMKP+ V G+LL C H N E+A ++A + + +
Sbjct: 355 HYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA-EIASEALFK 413
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSW-VQINGVLHDFVAG 499
++P G +++N+YAA ++W V +R+ M K + K G S+ V++ +H F
Sbjct: 414 LEPTN-PGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVE 472
Query: 500 DSTYKQASLIYKTLGEI 516
D ++ ++ IY+ L EI
Sbjct: 473 DKSHPRSYEIYQVLEEI 489
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 136/344 (39%), Gaps = 73/344 (21%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGH 93
+ L +HSQ +GF ++ L+ Y G L A +VF++ +WN MI G+
Sbjct: 99 RPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGY 158
Query: 94 AR-----------SETPEKSVYLYKQMI---------------------DKETEPDEYTY 121
R P K+V + +I DK +P+ T
Sbjct: 159 QRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITV 218
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFD 180
+L CA G G ++ G +G+ N+++ + +Y +CG + A+ LF+
Sbjct: 219 VSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMY----SKCGMIDVAKRLFE 274
Query: 181 DM-PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
++ R++ SWNS MI A +GK +AL+
Sbjct: 275 ELGNQRNLCSWNS-------------------------------MIGSLATHGKHDEALT 303
Query: 240 LFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
LF +M R D V V L AC G + G+ + +EE + P L +I
Sbjct: 304 LFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKIS--PKLEHY-GCMI 360
Query: 300 HMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAKQGYAQEA 342
+ G+++EAY + + M + + V W +++ + G + A
Sbjct: 361 DLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA 404
>gi|356529553|ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 540
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 183/528 (34%), Positives = 307/528 (58%), Gaps = 53/528 (10%)
Query: 12 ATSSKALTTRQIFSLL--QIRNTTKTLFQIHSQIIIN---GFSQKNYILAKLLAFYVTS- 65
S +LT R S L Q +N + L + H+QI+ + + Y++ +LL YV S
Sbjct: 9 TVESLSLTLRNTLSRLIEQCKNL-RELKKTHTQILKSPTLHTGDQYYLITRLL--YVCSF 65
Query: 66 ---GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPE-----KSVYLYKQMIDKETEPD 117
G A VF +NP +N MIR + E+ + K++ LYKQM K+ P+
Sbjct: 66 SYYGSFSYATNVFHMIKNPDLRAYNIMIRAYISMESGDDTHFCKALMLYKQMFCKDIVPN 125
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
T+ FLL C + G+ +H +V+ G+ +V++ +L++LY M+GG + AR
Sbjct: 126 CLTFPFLLKGCTQWLDGATGQAIHTQVIKFGFLKDVYVANSLISLY-MAGGL--LSNARK 182
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
+FD+M VV+WNS++ G ++ G +D A +F +M RN+++W ++I+G AQ G ++++
Sbjct: 183 VFDEMLVTDVVTWNSMVIGCLRNGGLDMAMDLFRKMNGRNIITWNSIITGLAQGGSAKES 242
Query: 238 LSLFNEMR---RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
L LF+EM+ V D++ + + LSACA++G + GKW+H Y+ N G E +V +
Sbjct: 243 LELFHEMQILSDDMVKPDKITIASVLSACAQLGAIDHGKWVHGYLRRN---GIECDVV-I 298
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------- 343
AL++MY CG++++A+ +F +M ++ +WT MI+ FA G +A
Sbjct: 299 GTALVNMYGKCGDVQKAFEIFEEMPEKDASAWTVMISVFALHGLGWKAFNCFLEMEKAGV 358
Query: 344 ----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAF 399
+TF+G+LSAC+H G V++GR F+ M + + I+P++ HY CMVD+ SRA L DE+
Sbjct: 359 KPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYSIEPQVYHYACMVDILSRARLFDESE 418
Query: 400 SLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALV-----A 454
L+++MPMKP+ V G+LL GC++H N EL +V L+ +++P A Y+ A
Sbjct: 419 ILIRSMPMKPDVYVWGALLGGCQMHGNVELGEKVVHHLI-DLEPHNHAFYVNWCDIYAKA 477
Query: 455 NVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
++ AAKR +++ +++K I+ +K PG S ++ING + +F AG S+
Sbjct: 478 GMFDAAKRIRNI--MKEKRIE---KKIPGCSMIEINGEVQEFSAGGSS 520
>gi|242066664|ref|XP_002454621.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
gi|241934452|gb|EES07597.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
Length = 496
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 242/423 (57%), Gaps = 39/423 (9%)
Query: 116 PDEYTYSFLLSVCA---RCGLFRE-GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG 171
P++ T +LS CA L R +H R L + S++ + T L YL S
Sbjct: 67 PNDVTLLTVLSACADSPSSPLARPLALTLHARALKL-FPSHLLLSTCLARFYLASRLP-- 123
Query: 172 VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQN 231
A LFD MP RSVV++N+++ G ++ G +D A+++FD MP + VSWT +I G +N
Sbjct: 124 -HLALQLFDTMPVRSVVTYNTMVSGLMRNGLVDAAFEVFDGMPGPDKVSWTALIDGFVKN 182
Query: 232 GKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV-----EENFSVG 286
G+ +A+ F M V D V L+A +SACAE+G L LG W+H V E N V
Sbjct: 183 GRHDEAIDCFRAMLLDSVEPDYVTLIAVVSACAEVGALGLGMWVHRLVLRQGLERNVRVA 242
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--- 343
N+LI MYA CG+++ A VF +++R VSW SMI G A G EA+
Sbjct: 243 ---------NSLIDMYARCGQVKLAAQVFHSIRKRTVVSWNSMIVGLAANGLCTEAIELF 293
Query: 344 ------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSR 391
+T GVL+ACSH G + G ++++ M +GI R+EHYGC+VDL R
Sbjct: 294 EEMRRQGFKPDAVTLTGVLTACSHAGLTEHGLRYYDLMTTEYGIAARMEHYGCVVDLLGR 353
Query: 392 AGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLA 451
AG +DEA +V+ MPM+PN+ VLG+LL GCR+H + ++A Q+ Q L E+DP A Y+
Sbjct: 354 AGRLDEAMHVVETMPMRPNEVVLGALLAGCRMHGDLDMAEQLMQHLF-ELDPGGDANYV- 411
Query: 452 LVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYK 511
L++N+YAA +W VR M GV+K PG S V+I+G +H+FV+ D ++ QA I +
Sbjct: 412 LLSNIYAAVGKWDGAGKVRSLMKARGVKKRPGHSIVEIDGDVHEFVSSDRSHPQAEEIGQ 471
Query: 512 TLG 514
LG
Sbjct: 472 MLG 474
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 112/275 (40%), Gaps = 40/275 (14%)
Query: 65 SGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFL 124
+G + A +VF+ P W +I G ++ ++++ ++ M+ EPD T +
Sbjct: 151 NGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAMLLDSVEPDYVTLIAV 210
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMP 183
+S CA G G VH VL G NV + +L+++Y CG V A +F +
Sbjct: 211 VSACAEVGALGLGMWVHRLVLRQGLERNVRVANSLIDMY----ARCGQVKLAAQVFHSIR 266
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
R+VVSWNS++ G A NG +A+ LF E
Sbjct: 267 KRTVVSWNSMIVGL-------------------------------AANGLCTEAIELFEE 295
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
MRR D V L L+AC+ G + G + + + + + ++ +
Sbjct: 296 MRRQGFKPDAVTLTGVLTACSHAGLTEHGLRYYDLMTTEYGIAAR---MEHYGCVVDLLG 352
Query: 304 SCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAKQG 337
G ++EA V M R N V +++ G G
Sbjct: 353 RAGRLDEAMHVVETMPMRPNEVVLGALLAGCRMHG 387
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 27/230 (11%)
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEM------PHRNVVSWTTMISGCAQNGKSRQAL 238
R VVSW S + ++GD+ A M P N V+ T++S CA + S A
Sbjct: 30 RDVVSWTSTIARAARQGDLHAAAASLCAMLSSPAAPAPNDVTLLTVLSACADSPSSPLAR 89
Query: 239 SLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNAL 298
L + + L L+ LS C + L + + F +V+ N +
Sbjct: 90 PLALTLHARALKLFPSHLL--LSTC--LARFYLASRLPHLALQLFDTMPVRSVVTYNT-M 144
Query: 299 IHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------------- 343
+ G ++ A+ VF M + VSWT++I GF K G EA+
Sbjct: 145 VSGLMRNGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAMLLDSVEPDY 204
Query: 344 LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAG 393
+T + V+SAC+ G + G + + G++ + ++D+++R G
Sbjct: 205 VTLIAVVSACAEVGALGLG-MWVHRLVLRQGLERNVRVANSLIDMYARCG 253
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 79/207 (38%), Gaps = 34/207 (16%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H ++ G + + L+ Y G + A +VF + WN MI G A +
Sbjct: 226 VHRLVLRQGLERNVRVANSLIDMYARCGQVKLAAQVFHSIRKRTVVSWNSMIVGLAANGL 285
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
+++ L+++M + +PD T + +L+ C+ GL G
Sbjct: 286 CTEAIELFEEMRRQGFKPDAVTLTGVLTACSHAGLTEHG--------------------- 324
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR-N 217
+ Y + E G+ A + + ++ + G +D A + + MP R N
Sbjct: 325 -LRYYDLMTTEYGI-----------AARMEHYGCVVDLLGRAGRLDEAMHVVETMPMRPN 372
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEM 244
V +++GC +G A L +
Sbjct: 373 EVVLGALLAGCRMHGDLDMAEQLMQHL 399
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 182/578 (31%), Positives = 298/578 (51%), Gaps = 77/578 (13%)
Query: 26 LLQIRNTTKTLFQIHSQIIINGFS-QKNYILAKLLAFYVTSGYLINAHKVFEK------- 77
LLQ + TL IHS + GF + LA+L+ Y G L +A +F+
Sbjct: 31 LLQCCTSLTTLKLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHHHG 90
Query: 78 -TENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
T+ P++ + N M+R +A + +++ LY M + +TY F+L VCA
Sbjct: 91 HTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVF 150
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLK 195
GE VHG+V+ +G+ S++F+ L+++Y +CG +G A +FD M R VV W +++
Sbjct: 151 GEVVHGQVVRTGFGSDLFVEAALVDMY----AKCGEIGDAHEVFDRMLIRDVVCWTAMIT 206
Query: 196 GYVK---------------------------------------RGDIDGAWKIFDEMPHR 216
Y + R I A +FD M R
Sbjct: 207 LYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISRARLVFDRMEER 266
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
N +SW +M+SG QNG+ ALSLFN+M+ + + V + +SAC+ +G LG+ +H
Sbjct: 267 NGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLH 326
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFR--KMQRRNTVSWTSMITGFA 334
++V + + + +L NA++ MY CG+++ A +F ++ R+ SW +I+G+
Sbjct: 327 NFVISS----KMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYG 382
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
G+ +EAL +TF +LSACSH G +DEGR+ F M + ++P +
Sbjct: 383 VHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTK-LSVRPEM 441
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
+HY CMVD+ RAG ++EAF L++ +P +P+D V G+LLL CRIH N EL A L
Sbjct: 442 KHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLF- 500
Query: 440 EIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG 499
+++PE GY L++N+YAA+ +W++V VRQ M G++KP S ++ +H F
Sbjct: 501 QLEPEH-TGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTA 559
Query: 500 DSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIE 537
D + +Y+ + + ++ GY PD+S + +E
Sbjct: 560 DQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVE 597
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 173/470 (36%), Positives = 259/470 (55%), Gaps = 61/470 (12%)
Query: 87 NQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLA 146
N ++R A S P ++ L+++ + PD +TY L+ CAR REGE +H
Sbjct: 776 NTVLRIAAGSPRPRVALELHRRRL---ALPDTHTYPPLIQACARLLALREGECLHAEAAK 832
Query: 147 SGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGA 206
+G+ + VF++ +L++LY G CG+ + A
Sbjct: 833 NGFVTLVFVQNSLVHLY----GACGL------------------------------FESA 858
Query: 207 WKIFDEMP--HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACA 264
K+FDEMP RN+VSW +M++ A NG+ + L++F EM D +V+ L+ACA
Sbjct: 859 HKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACA 918
Query: 265 EIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR-RNT 323
E G L LG+ +H YVE+ V V +NALI +YA CG + +A +F +M R
Sbjct: 919 EFGALALGRRVHVYVEKVGLVENSHV----SNALIDLYAKCGSVNDARRIFEEMGLGRTV 974
Query: 324 VSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFEC 368
VSWTS+I G A G+ +EAL +T +GVL ACSH G VD+G ++F+
Sbjct: 975 VSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDR 1034
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAE 428
M +++GI PRIEH GCMVDL RAG ++EA+ + MP++PN V +LL C +H E
Sbjct: 1035 MKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKLE 1094
Query: 429 LASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
L ++LV E+DP + Y+ L++N+YAA W DV +R+ M+K VRK PG S V+
Sbjct: 1095 LGKVAWERLV-ELDPGHSGDYV-LLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLVE 1152
Query: 489 INGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ +++FV GD ++ ++ IY+ L EI + +EGY P S + IEE
Sbjct: 1153 LRNSVYEFVMGDRSHPESEQIYEMLAEIAERLRREGYIPRTSNVLADIEE 1202
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 131/297 (44%), Gaps = 43/297 (14%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEK--TENPSTAIWNQMIRGHARS 96
+H++ NGF ++ L+ Y G +AHKVF++ + WN M+ A +
Sbjct: 826 LHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAAN 885
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
P + + ++ +M+ + PD +T +L+ CA G G +VH V G N +
Sbjct: 886 GRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVENSHVS 945
Query: 157 TNLMNLYLMSGGECG-VGCARLLFDDMP-ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP 214
L++LY +CG V AR +F++M R+VVSW SL
Sbjct: 946 NALIDLY----AKCGSVNDARRIFEEMGLGRTVVSWTSL--------------------- 980
Query: 215 HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKW 274
I G A NG ++AL LF+ M R ++ ++ +V L AC+ G + G
Sbjct: 981 ----------IVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFR 1030
Query: 275 IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMI 330
++E++ G P + L ++ + G +EEAY M N V W +++
Sbjct: 1031 YFDRMKEDY--GISPRIEHL-GCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLL 1084
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 80/198 (40%), Gaps = 35/198 (17%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI-WNQMIRGHARS 96
++H + G + +++ L+ Y G + +A ++FE+ T + W +I G A +
Sbjct: 928 RVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAAN 987
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
++++ L+ M ++ P E T +L C+ CGL +G + R+
Sbjct: 988 GFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRMKED--------- 1038
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP-H 215
Y +S +GC D+ R+ G ++ A+ MP
Sbjct: 1039 ------YGISPRIEHLGC----MVDLLGRA--------------GRVEEAYDYIITMPLE 1074
Query: 216 RNVVSWTTMISGCAQNGK 233
N V W T++ CA + K
Sbjct: 1075 PNAVVWRTLLGSCAMHKK 1092
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 175/510 (34%), Positives = 279/510 (54%), Gaps = 39/510 (7%)
Query: 49 SQKNYILAK---LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYL 105
SQ N+ L L+ YV L +A ++F++ WN MI G+A+ ++
Sbjct: 195 SQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQA--- 251
Query: 106 YKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCS-NVFIRTNLMNLYL 164
K++ ++ D +T++ ++S + G+ E + + S N + + +
Sbjct: 252 -KRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKM 310
Query: 165 MSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTM 224
+ GE LF+ MP R++ SWN+++ GY + G I A K+FD MP R+ VSW +
Sbjct: 311 VIAGE--------LFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAI 362
Query: 225 ISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS-YVEENF 283
ISG AQNG +AL++F EM+R ++ ALS CA+I L+LGK +H V+ F
Sbjct: 363 ISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGF 422
Query: 284 SVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL 343
G + NAL+ MY CG +EA VF ++ ++ VSW +MI G+A+ G+ ++AL
Sbjct: 423 ETG-----CFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQAL 477
Query: 344 ---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDL 388
+T +GVLSACSH G +D G ++F M++++ +KP +HY CM+DL
Sbjct: 478 VLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDL 537
Query: 389 FSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAG 448
RAG ++EA +L++NMP P A G+LL RIH N EL + A+ +V +++P Q +G
Sbjct: 538 LGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAE-MVFKMEP-QNSG 595
Query: 449 YLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASL 508
L++N+YAA+ RW DV +R KM + GV+K G SWV++ +H F GD + +
Sbjct: 596 MYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDR 655
Query: 509 IYKTLGEITMQAMQEGYKPDISELFLGIEE 538
IY L E+ ++ +EGY + +EE
Sbjct: 656 IYAFLEELDLKMRREGYVSSTKLVLHDVEE 685
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 188/413 (45%), Gaps = 73/413 (17%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
+L YV + L AHK+F+ WN M+ G+A++ +++ +++ +K +
Sbjct: 114 MLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEA----REVFNKMPHRN 169
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
+++ LL+ G +E R+ S + LM Y+ +G AR
Sbjct: 170 SISWNGLLAAYVHNGRLKEAR----RLFESQSNWELISWNCLMGGYVKRN---MLGDARQ 222
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
LFD MP R V+SWN+++ GY + GD+ A ++F+E P R+V +WT M+SG QNG +A
Sbjct: 223 LFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEA 282
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKL-GKWIHSYVEENFSVGREPVLVSLNN 296
F+EM ++++ A L+ + + + G+ + N +S N
Sbjct: 283 RKYFDEMPVK----NEISYNAMLAGYVQYKKMVIAGELFEAMPCRN---------ISSWN 329
Query: 297 ALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------- 343
+I Y G I +A +F M +R+ VSW ++I+G+A+ G+ +EAL
Sbjct: 330 TMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESS 389
Query: 344 --LTFLGVLSACS-----------HGGFVDEGRQ------------FFECMNQN------ 372
TF LS C+ HG V G + +F+C + +
Sbjct: 390 NRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVF 449
Query: 373 WGIKPR-IEHYGCMVDLFSRAGLMDEAFSLVQNMP---MKPNDAVLGSLLLGC 421
GI+ + + + M+ ++R G +A L ++M +KP++ + +L C
Sbjct: 450 EGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSAC 502
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 146/343 (42%), Gaps = 70/343 (20%)
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
K ++P WN+ I H R+ + ++ ++ M P + S+
Sbjct: 40 KFKDPDIVTWNKAISSHMRNGHCDSALRVFNSM------PRRSSVSY------------- 80
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKG 196
+ SGY N AR LFD MP R + SWN +L G
Sbjct: 81 ------NAMISGYLRNA-----------------KFSLARDLFDKMPERDLFSWNVMLTG 117
Query: 197 YVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVAL 256
YV+ + A K+FD MP ++VVSW M+SG AQNG +A +FN+M + ++
Sbjct: 118 YVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHR----NSISW 173
Query: 257 VAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFR 316
L+A G LK + + F L+S N L+ Y + +A +F
Sbjct: 174 NGLLAAYVHNGRLKEARRL-------FESQSNWELISW-NCLMGGYVKRNMLGDARQLFD 225
Query: 317 KMQRRNTVSWTSMITGFAKQGYAQEA-----------LLTFLGVLSACSHGGFVDEGRQF 365
+M R+ +SW +MI+G+A+ G +A + T+ ++S G VDE R++
Sbjct: 226 RMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKY 285
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
F+ M +K I Y M+ + + M A L + MP +
Sbjct: 286 FDEM----PVKNEIS-YNAMLAGYVQYKKMVIAGELFEAMPCR 323
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 6/131 (4%)
Query: 9 ANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYL 68
+N +T S AL+T + L++ Q+H Q++ GF ++ LL Y G
Sbjct: 389 SNRSTFSCALSTCADIAALELGK------QVHGQVVKAGFETGCFVGNALLGMYFKCGST 442
Query: 69 INAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVC 128
A+ VFE E WN MI G+AR +++ L++ M +PDE T +LS C
Sbjct: 443 DEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSAC 502
Query: 129 ARCGLFREGEQ 139
+ GL G +
Sbjct: 503 SHSGLIDRGTE 513
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 170/516 (32%), Positives = 267/516 (51%), Gaps = 55/516 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H++ + ++L LL+ Y G L A +VF++ +PST W +I + +
Sbjct: 547 QLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAG 606
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++V++ + PD +T +L+ CAR GE V G +VF+ T
Sbjct: 607 DLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVAT 666
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
++LY VK G++ A ++FD+M H++
Sbjct: 667 AAVDLY----------------------------------VKCGEMAKAREVFDKMRHKD 692
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
V+W M+ G A NG R+AL LF M+ + D A+ ALSAC +G L LG+
Sbjct: 693 AVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIR 752
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
V+ + + PVL ALI MYA CG EA+ VF++M++++ + W +MI G G
Sbjct: 753 MVDWDEFLD-NPVL---GTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTG 808
Query: 338 YAQEALL---------------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+ + A TF+G+L +C+H G + +GR++F M + + I PRIEHY
Sbjct: 809 HEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHY 868
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
GCMVDL SRAGL+ EA LV +MPM N +LG+LL GC+IH N ELA V ++L+ ++
Sbjct: 869 GCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLIL-LE 927
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P + Y+ +++N+Y+ RW+D A +R M GV K P SWV+ G +H+F GD +
Sbjct: 928 PWNSGNYV-MLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKS 986
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ + IYK L E+ ++ GY+P + +E+
Sbjct: 987 HPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVED 1022
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 170/516 (32%), Positives = 267/516 (51%), Gaps = 55/516 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H++ + ++L LL+ Y G L A +VF++ +PST W +I + +
Sbjct: 571 QLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAG 630
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++V++ + PD +T +L+ CAR GE V G +VF+ T
Sbjct: 631 DLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVAT 690
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
++LY VK G++ A ++FD+M H++
Sbjct: 691 AAVDLY----------------------------------VKCGEMAKAREVFDKMRHKD 716
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
V+W M+ G A NG R+AL LF M+ + D A+ ALSAC +G L LG+
Sbjct: 717 AVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIR 776
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
V+ + + PVL ALI MYA CG EA+ VF++M++++ + W +MI G G
Sbjct: 777 MVDWDEFLD-NPVL---GTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTG 832
Query: 338 YAQEALL---------------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+ + A TF+G+L +C+H G + +GR++F M + + I PRIEHY
Sbjct: 833 HEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHY 892
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
GCMVDL SRAGL+ EA LV +MPM N +LG+LL GC+IH N ELA V ++L+ ++
Sbjct: 893 GCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLIL-LE 951
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P + Y+ +++N+Y+ RW+D A +R M GV K P SWV+ G +H+F GD +
Sbjct: 952 PWNSGNYV-MLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKS 1010
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ + IYK L E+ ++ GY+P + +E+
Sbjct: 1011 HPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVED 1046
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 167/495 (33%), Positives = 281/495 (56%), Gaps = 27/495 (5%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVF-EKTENPSTAIWNQMIRGHARSET 98
H I G+ ++ ++ LL ++G L ++ ++F E + + WN MI G A++
Sbjct: 130 HGVAIKLGYVRQVFVGNALLHSSASAGSLRDSRRLFAEMAPHRNVVSWNTMIGGCAQAGE 189
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
++ L+++M + D +T+ LL VC++ G G VH +LASG ++ +
Sbjct: 190 TSEACALFREMRRQGVLADVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNA 249
Query: 159 LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y G+CG + A FD MP ++VVSW S+L K G +D A F++MP RN
Sbjct: 250 LVDMY----GKCGDLWMAHRCFDVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMPERN 305
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
++SW MIS Q G+ + L L+N M+ + D+V L LS + GDL G+ IH
Sbjct: 306 IISWNAMISCYVQGGRFPETLGLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHC 365
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y++++FS +P + LN +LI MYA CG+++ + +F +M +NT+SW +I A G
Sbjct: 366 YIQDSFS---DPGVTVLN-SLIDMYARCGQVDTSISLFTEMPNKNTISWNVIIGALAMHG 421
Query: 338 YAQEALL---------------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
AQEA++ TF+G+LSACSHGG +++G+ +F+ M + +KP +EHY
Sbjct: 422 RAQEAVMFFRAMVSDAFSPDEITFVGLLSACSHGGLLEDGQYYFKAMRHIYNVKPEVEHY 481
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
CMVDL R G + +A L+++MPMKP+ V G+L+ CRIH + E+ ++A K + E++
Sbjct: 482 ACMVDLLGRHGHLAKAVDLIKDMPMKPDVVVWGALIGACRIHGHVEIG-KLAIKQLLELE 540
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
G L++N+ ++W+D+ +R+ M G +K G S ++IN +H+F D
Sbjct: 541 GIN-GGLFVLISNLLYETRQWEDMKRLRKLMRDRGTKKDMGVSSIEINNSIHEFGVEDIR 599
Query: 503 YKQASLIYKTLGEIT 517
++ +S IY + ++
Sbjct: 600 HESSSQIYAAVDQLA 614
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 210/475 (44%), Gaps = 99/475 (20%)
Query: 22 QIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVT-SGY-----LINAHKVF 75
+ LLQ + + L Q+H+ ++ +G S ++ +L+A Y SG L +A ++F
Sbjct: 5 HVLELLQQCRSIRHLDQLHAHLLAHGPSAVASVVPQLVASYCALSGRAGDVALCHARRMF 64
Query: 76 EKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFR 135
++ +P +N +IR ++ S P++++ L++ ++ + P+E+T F+L C+R
Sbjct: 65 DRVPDPDRFAYNSLIRAYSNSGCPQEALCLHRDVLRRGILPNEFTLPFVLKACSRARAAE 124
Query: 136 EGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDM-PARSVVSWNSLL 194
HG + GY VF+ L++ +G + +R LF +M P R+VVSWN+++
Sbjct: 125 HALATHGVAIKLGYVRQVFVGNALLHSSASAG---SLRDSRRLFAEMAPHRNVVSWNTMI 181
Query: 195 KGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQV 254
G + G+ A CA LF EMRR V D
Sbjct: 182 GGCAQAGETSEA---------------------CA----------LFREMRRQGVLADVF 210
Query: 255 ALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGV 314
V+ L C++ G+L++G+ +H ++ + G L+ L NAL+ MY CG++ A+
Sbjct: 211 TFVSLLLVCSKEGNLEVGRLVHCHM---LASGSRVDLI-LGNALVDMYGKCGDLWMAHRC 266
Query: 315 FRKMQRRNTVSWTSMITGFAKQG--------------------------YAQ-----EAL 343
F M +N VSWTSM+ AK G Y Q E L
Sbjct: 267 FDVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMPERNIISWNAMISCYVQGGRFPETL 326
Query: 344 ---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDL 388
+T GVLS G + GR C Q+ P + ++D+
Sbjct: 327 GLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGR-MIHCYIQDSFSDPGVTVLNSLIDM 385
Query: 389 FSRAGLMDEAFSLVQNMPMKPN---DAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
++R G +D + SL MP K + ++G+L + H A+ A + +V++
Sbjct: 386 YARCGQVDTSISLFTEMPNKNTISWNVIIGALAM----HGRAQEAVMFFRAMVSD 436
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 179/535 (33%), Positives = 286/535 (53%), Gaps = 67/535 (12%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
+L+ Y SG + + VF++ +N +I G + + +++ + +M ++ E
Sbjct: 95 MLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFEST 154
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCAR 176
+YT+ +L C++ + G+Q+HGR++A+ +VF+ L N+Y +CG + AR
Sbjct: 155 DYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMY----AKCGALDQAR 210
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGD---------------------------------- 202
LFD M ++VVSWNS++ GY++ G
Sbjct: 211 WLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCG 270
Query: 203 -IDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALS 261
ID A K F E+ ++ V WTTM+ GCAQNGK AL LF EM V D + + +S
Sbjct: 271 YIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVS 330
Query: 262 ACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR 321
+CA + L G+ +H F V + +LVS +AL+ MY+ CGE +A+ VF++M R
Sbjct: 331 SCARLASLCQGQAVHGKAVI-FGVDHD-LLVS--SALVDMYSKCGETADAWIVFKRMLTR 386
Query: 322 NTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFF 366
N +SW SMI G+A+ G EAL +TF+GVLSAC H G V+ G+ +F
Sbjct: 387 NVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYF 446
Query: 367 ECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH-- 424
+++ G+ P +HY CM++L RAG MD+A L+++M +PN + +LL CRI+
Sbjct: 447 YSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCD 506
Query: 425 -NNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPG 483
NN E+A+ + + E+DP A Y+ L +N+YAA RW+DVAAVR M ++K
Sbjct: 507 VNNGEMAA----RHLFELDPHNAGPYIML-SNIYAACGRWKDVAAVRSLMKNNKIKKFAA 561
Query: 484 QSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
SW++I+ +H FVA D T+ + IY+ L + + + G+ PD + + + E
Sbjct: 562 YSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKKLQESGFTPDTNLVLHDVVE 616
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 164/331 (49%), Gaps = 36/331 (10%)
Query: 120 TYSFLLSVCARCGLFREGEQVHGRVLASGY-CSNVFIRTNLMNLYLMSGGECGVGCARLL 178
+Y+ LL C R + +++ + Y ++ F++ L++LY SG + AR L
Sbjct: 24 SYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHLYAKSGN---LSDARDL 80
Query: 179 FDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQAL 238
FD M R V SWN++L Y K G+++ +FD+M + VS+ T+I+G + NG S QAL
Sbjct: 81 FDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQAL 140
Query: 239 SLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNAL 298
F M+ V+ L AC+++ D+K GK IH + S+G E V V NAL
Sbjct: 141 EFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVAT-SLG-ESVFVW--NAL 196
Query: 299 IHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------------- 343
+MYA CG +++A +F +M +N VSW SMI+G+ + G +
Sbjct: 197 TNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQ 256
Query: 344 LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQ 403
+T +LSA G++DE + F + + + GC ++ G ++A L +
Sbjct: 257 VTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGC-----AQNGKEEDALLLFR 311
Query: 404 NMPM---KPNDAVLGSLLLGCRIHNNAELAS 431
M + +P++ + S++ C A LAS
Sbjct: 312 EMLLENVRPDNFTISSVVSSC-----ARLAS 337
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 143/343 (41%), Gaps = 68/343 (19%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH +I+ + ++ L Y G L A +F++ N + WN MI G+ ++
Sbjct: 176 QIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNG 235
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
PE L+ +M PD+ T S +LS +CG E + + + T
Sbjct: 236 QPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKE----KDKVCWT 291
Query: 158 NLMNLYLMSGGECGVGCAR--------LLF----------DDMPARSVVS---------- 189
+M VGCA+ LLF D+ SVVS
Sbjct: 292 TMM-----------VGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQ 340
Query: 190 -------------------WNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQ 230
++L+ Y K G+ AW +F M RNV+SW +MI G AQ
Sbjct: 341 GQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQ 400
Query: 231 NGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK-WIHSYVEENFSVGREP 289
NGK +AL+L+ EM + D + V LSAC G ++ G+ + +S + + G P
Sbjct: 401 NGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIH---GMNP 457
Query: 290 VLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMIT 331
+ +I++ G +++A + + M N + W+++++
Sbjct: 458 TFDHY-SCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLS 499
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 107/204 (52%), Gaps = 9/204 (4%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGH 93
+T ++ ++ +G ++ +L+ Y GY+ A K F + + W M+ G
Sbjct: 238 ETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGC 297
Query: 94 ARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNV 153
A++ E ++ L+++M+ + PD +T S ++S CAR +G+ VHG+ + G ++
Sbjct: 298 AQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDL 357
Query: 154 FIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDE 212
+ + L+++Y +CG A ++F M R+V+SWNS++ GY + G A +++E
Sbjct: 358 LVSSALVDMY----SKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEE 413
Query: 213 MPHRNV----VSWTTMISGCAQNG 232
M H N+ +++ ++S C G
Sbjct: 414 MLHENLKPDNITFVGVLSACMHAG 437
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 14/149 (9%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
ML+E + P N SS + ++ SL Q + +H + +I G + + L+
Sbjct: 313 MLLENVRPDNFTISSVVSSCARLASLCQGQ-------AVHGKAVIFGVDHDLLVSSALVD 365
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y G +A VF++ + WN MI G+A++ +++ LY++M+ + +PD T
Sbjct: 366 MYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNIT 425
Query: 121 YSFLLSVCARCGLFREGE-------QVHG 142
+ +LS C GL G+ ++HG
Sbjct: 426 FVGVLSACMHAGLVERGQGYFYSISKIHG 454
>gi|356577724|ref|XP_003556973.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Glycine max]
Length = 549
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 172/483 (35%), Positives = 272/483 (56%), Gaps = 27/483 (5%)
Query: 36 LFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHAR 95
L Q ++ G Q + +LA+ + + G A+ VF PS +N +I +
Sbjct: 46 LQQTQGFMLTRGLDQDDILLARFIYTSASLGLSSYAYSVFISNHRPSIFFYNNVIWALS- 104
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
S P +++ L+ + PD Y++ F+L G+Q+H + + SG S+ +
Sbjct: 105 SSNPTRAISLFNAIRLLGMPPDSYSFPFVLKAVVCLSAVHVGKQIHCQAIVSGLDSHPSV 164
Query: 156 RTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP 214
T+L+ +Y C + AR LFD + WN++L GY K G++ A +F+ MP
Sbjct: 165 VTSLVQMY----SSCAHLSSARKLFDGATFKHAPLWNAMLAGYAKVGNMSNARNLFECMP 220
Query: 215 H--RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
R+VVSWTT+ISG Q +A++LF M V D++A++A LSACA++G L+LG
Sbjct: 221 EKDRDVVSWTTLISGYTQTHSPNEAITLFRIMLLQNVQPDEIAILAVLSACADLGALQLG 280
Query: 273 KWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
+WIH+Y+E++ + R+ V L N+LI MYA G+I +A +F+ M+ + ++WT++I+G
Sbjct: 281 EWIHNYIEKHNNKLRKTV--PLCNSLIDMYAKSGDISKARQLFQNMKHKTIITWTTVISG 338
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
A G+ +EAL +T + VLSACSH G V+ GR F M +GI+P
Sbjct: 339 LALHGFGKEALDVFSCMEKARVKPNEVTLIAVLSACSHVGLVELGRNIFTSMRSKYGIEP 398
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
+IEHYGCM+DL RAG + EA LV+ MP + N AV GSLL + +A LA++ + L
Sbjct: 399 KIEHYGCMIDLLGRAGYLQEAMELVRVMPSEANAAVWGSLLSASNRYGDAALAAEALRHL 458
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
+ ++P Y +L++N YAA W++ A VR+ M K PG S+V++N +++F+
Sbjct: 459 -SVLEPHNCGNY-SLLSNTYAALGWWKEAAMVRKVMRDTCAEKVPGVSFVELNNRVYEFI 516
Query: 498 AGD 500
AGD
Sbjct: 517 AGD 519
>gi|147816693|emb|CAN62262.1| hypothetical protein VITISV_013985 [Vitis vinifera]
Length = 531
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 167/504 (33%), Positives = 291/504 (57%), Gaps = 27/504 (5%)
Query: 26 LLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI 85
LLQ+ + + + QIH+Q I++G + +LL YV+ + A VF + +P
Sbjct: 31 LLQMCHNFQEVRQIHAQFIVSGLLARPPNAGRLLDSYVSMSQIYYALLVFNRIPSPDVFA 90
Query: 86 WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVL 145
+N MIRG P S+ LY +++ PD YTY+F+L VC+ EG+QVH +V+
Sbjct: 91 YNAMIRGLTLGNCPYDSLLLYNKLLLGGLTPDNYTYTFVLKVCSHLKAIFEGKQVHCQVI 150
Query: 146 ASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDG 205
+G + I T+L+++Y S +C + CA + + +V++ NS++ GY+ +G ++
Sbjct: 151 KAGVAPDTHIHTSLIHMYAKS--DC-LACAEGVLAECSQENVLAINSMISGYMSQGHVEK 207
Query: 206 AWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM---RRARVGLDQVALVAALSA 262
A +FD+M ++ +W+ MI+G +NG +AL +F EM + V ++ ALV++LSA
Sbjct: 208 ARAMFDKMGAKDAATWSGMITGYTKNGMHEEALVMFREMMMVSNSGVQPNESALVSSLSA 267
Query: 263 CAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRN 322
A +G L G+WIH+Y+ +G + + ++L L+ MYA CG I +Y +FR+MQ+R+
Sbjct: 268 TACLGALDQGRWIHAYIRR---IGAK-ISITLGTGLVDMYAKCGSIHCSYKLFREMQQRD 323
Query: 323 TVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFE 367
V+W M++GFA G A++ + F+ +LSACSH G+++ G +F
Sbjct: 324 VVTWGVMMSGFAMHGQARKCFQLFDEMVAGGTRPNEVIFVAILSACSHAGYLELGHHYFN 383
Query: 368 CMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNA 427
M ++GI+P +EHYGCMVDL RAG + EA L+ +MP +P + G+LL CRIH +
Sbjct: 384 QMVTDFGIRPSVEHYGCMVDLLGRAGQLAEAEELIISMPEEPTAVIWGALLSACRIHKDL 443
Query: 428 ELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWV 487
+ ++L+ +++P + Y L ++++A ++ V + + + + G S++
Sbjct: 444 RRGRRAFRQLM-QLEPLRGDRY-KLAGQMFSSAGEKEEADNVTRFIKENELETTRGSSFI 501
Query: 488 QINGVLHDFVAGDSTYKQASLIYK 511
+INGV+H+FV GD+ + +A +Y+
Sbjct: 502 EINGVVHEFVVGDADHHKAREMYR 525
>gi|326506208|dbj|BAJ86422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 582
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 168/460 (36%), Positives = 263/460 (57%), Gaps = 30/460 (6%)
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
P ++ L+ ++ +PD Y+ L+ CAR + Q+HG G S+ +R
Sbjct: 55 NPHLALRLFDHLLRSGADPDPIAYALALARCARERAYPAAAQLHGHAAKRGAASHRRVRN 114
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L++ Y + G + AR +FD P +++WN LL+GY + D + F +MP R+
Sbjct: 115 GLIHAYSVCGM---LFDARKVFDHGPEVDMIAWNCLLRGYAQGRDTGALREFFAQMPARD 171
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRA-RVGLDQVALVAALSACAEIGDLKLGKWIH 276
VSW T+I+ C NG+ +A+++F EM + D+V LV+ +SA A +G L G W H
Sbjct: 172 SVSWNTVIAWCVANGEHEEAVAVFREMLASNECQPDRVTLVSVISAIAYLGALAQGLWAH 231
Query: 277 SYVEENFSVGREPVLVS--LNNALIHMYASCGEIEEAYGVFRK-MQRRNTVSWTSMITGF 333
+YV R+ + V L++ALI+MY+ CG IE A VF R+ +W +M+ GF
Sbjct: 232 AYV------CRKEIEVDEKLSSALINMYSKCGFIEGAVYVFENSCALRSVDTWNAMLAGF 285
Query: 334 AKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
G ++ AL +TF +L+ACSHGGFV+EG +FE M + I+P
Sbjct: 286 TASGCSERALELFTRMESSGFVPNKITFNTLLNACSHGGFVEEGIGYFERMTNSSSIEPD 345
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
I HYGCMVDLF RAGL ++A ++Q MPM+P+ AV +L+ CR ++N EL + +L+
Sbjct: 346 IAHYGCMVDLFCRAGLFEKAEEMIQMMPMEPDAAVWKALVGACRTYSNFELGKKAGHRLI 405
Query: 439 AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVA 498
E P AGY+ L++N+YA W+ V VR+ M+ GV+K PG S ++++GV+H+F++
Sbjct: 406 -EAAPNDHAGYV-LLSNIYALDGNWKGVYKVRKLMLNCGVQKVPGSSSIELDGVIHEFIS 463
Query: 499 GDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
GD ++ + +Y+ L EI Q GY PD S++ L I++
Sbjct: 464 GDKSHSRKRDVYEMLSEICQQLKVAGYAPDTSQVLLDIDD 503
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 100/245 (40%), Gaps = 42/245 (17%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHAR-- 95
Q+H G + + L+ Y G L +A KVF+ WN ++RG+A+
Sbjct: 96 QLHGHAAKRGAASHRRVRNGLIHAYSVCGMLFDARKVFDHGPEVDMIAWNCLLRGYAQGR 155
Query: 96 ---------SETP--------------------EKSVYLYKQMI-DKETEPDEYTYSFLL 125
++ P E++V ++++M+ E +PD T ++
Sbjct: 156 DTGALREFFAQMPARDSVSWNTVIAWCVANGEHEEAVAVFREMLASNECQPDRVTLVSVI 215
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV--GCARLLFDDMP 183
S A G +G H V + + + L+N+Y +CG G + +
Sbjct: 216 SAIAYLGALAQGLWAHAYVCRKEIEVDEKLSSALINMY----SKCGFIEGAVYVFENSCA 271
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR----NVVSWTTMISGCAQNGKSRQALS 239
RSV +WN++L G+ G + A ++F M N +++ T+++ C+ G + +
Sbjct: 272 LRSVDTWNAMLAGFTASGCSERALELFTRMESSGFVPNKITFNTLLNACSHGGFVEEGIG 331
Query: 240 LFNEM 244
F M
Sbjct: 332 YFERM 336
>gi|15228954|ref|NP_191214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180975|sp|Q9LXY5.1|PP284_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g56550
gi|7594533|emb|CAB88058.1| putative protein [Arabidopsis thaliana]
gi|91806586|gb|ABE66020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646013|gb|AEE79534.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 581
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 177/529 (33%), Positives = 276/529 (52%), Gaps = 59/529 (11%)
Query: 21 RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKT 78
R I +LQ N+ K L +IHS +IING I LL F S G L +A +F+
Sbjct: 6 RVIVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHF 65
Query: 79 E-NPSTAIWNQMIRGHARSETPEKSVYLYKQMI-DKETEPDEYTYSFLLSVCARCGLFRE 136
+ +PST+ WN +IRG + S +P S+ Y +M+ + PD +T++F L C R +
Sbjct: 66 DSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPK 125
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKG 196
++HG V+ SG+ + + T SL++
Sbjct: 126 CLEIHGSVIRSGFLDDAIVAT----------------------------------SLVRC 151
Query: 197 YVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVAL 256
Y G ++ A K+FDEMP R++VSW MI + G QALS++ M V D L
Sbjct: 152 YSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTL 211
Query: 257 VAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFR 316
VA LS+CA + L +G +H + R V ++NALI MYA CG +E A GVF
Sbjct: 212 VALLSSCAHVSALNMGVMLHRIACDI----RCESCVFVSNALIDMYAKCGSLENAIGVFN 267
Query: 317 KMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDE 361
M++R+ ++W SMI G+ G+ EA+ +TFLG+L CSH G V E
Sbjct: 268 GMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKE 327
Query: 362 GRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGC 421
G + FE M+ + + P ++HYGCMVDL+ RAG ++ + ++ + + +LL C
Sbjct: 328 GVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSC 387
Query: 422 RIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKP 481
+IH N EL +VA K + +++ A Y+ L+ ++Y+AA Q A++R+ + ++
Sbjct: 388 KIHRNLELG-EVAMKKLVQLEAFNAGDYV-LMTSIYSAANDAQAFASMRKLIRSHDLQTV 445
Query: 482 PGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
PG SW++I +H FV D + ++++IY LGE+ +A+ GYKP+ S
Sbjct: 446 PGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPEDS 494
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 174/512 (33%), Positives = 273/512 (53%), Gaps = 52/512 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H+ + + +S Y+ + L+ Y G + A +VF + WN +I + ++
Sbjct: 168 QVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNG 227
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ ++ +M+D EPDE T + ++S CA +EG Q+H RV+ + + +
Sbjct: 228 PASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLG 287
Query: 158 N-LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
N L+++Y +C V AR +FD M R+VVS S++ GY + + A +F +M
Sbjct: 288 NALVDMY----AKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQ 343
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
RNVVSW +I+G QNG++ +AL LF ++R + W
Sbjct: 344 RNVVSWNALIAGYTQNGENEEALRLFRLLKRESI------------------------WP 379
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
Y N + + V N+LI MY CG IE+ VF KM+ R+ VSW ++I G+A+
Sbjct: 380 THYTFGNLL--KSDIFV--GNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQ 435
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
GY EAL +T +GVL ACSH G V+EGR +F M ++ G+ P +
Sbjct: 436 NGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEH-GLIPLKD 494
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HY CMVDL RAG ++EA +L++ MP+ P+ V GSLL C++H N E+ A+KL+ E
Sbjct: 495 HYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLL-E 553
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
IDP + Y+ L++N+YA RW DV VR+ M + GV K PG SW+++ +H F+ D
Sbjct: 554 IDPWNSGPYV-LLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKD 612
Query: 501 STYKQASLIYKTLGEITMQAMQEGYKPDISEL 532
++ IY L +T Q + GY PD ++
Sbjct: 613 KSHPHRKQIYSVLKMLTEQMKRVGYIPDANDF 644
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 158/309 (51%), Gaps = 24/309 (7%)
Query: 116 PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGC 174
P+ ++ LL C R R VH R+L + + +FI+ L+++Y G+C +
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVY----GKCDCLDD 68
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
AR LFD MP R+ +WNSL+ K G +D A ++F MP + SW +M+SG AQ+ +
Sbjct: 69 ARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRF 128
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
++L F +M R L++ + +ALSACA + DL +G +H+ V S R V +
Sbjct: 129 EESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALV----SKSRYSTDVYM 184
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------- 343
+ALI MY+ CG + A VF M RN V+W S+IT + + G A EAL
Sbjct: 185 GSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGL 244
Query: 344 ----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAF 399
+T V+SAC+ + EG Q + + + + +VD++++ ++EA
Sbjct: 245 EPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEAR 304
Query: 400 SLVQNMPMK 408
+ M ++
Sbjct: 305 RVFDRMSIR 313
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 148/305 (48%), Gaps = 40/305 (13%)
Query: 44 IINGFSQKN-YILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKS 102
+ + Q+N + L++ SG+L A ++F P WN M+ G A+ + E+S
Sbjct: 72 LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131
Query: 103 VYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNL 162
+ + +M ++ +EY++ LS CA G QVH V S Y ++V++ + L+++
Sbjct: 132 LEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDM 191
Query: 163 YLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSW 221
Y +CG V CA +F M R++V+WNSL+ Y
Sbjct: 192 Y----SKCGSVACAEEVFSGMIERNLVTWNSLITCY------------------------ 223
Query: 222 TTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE 281
QNG + +AL +F M + + D+V L + +SACA + LK G IH+ V +
Sbjct: 224 -------EQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVK 276
Query: 282 NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQE 341
+ V L NAL+ MYA C ++ EA VF +M RN VS TSM++G+A+ +
Sbjct: 277 TNKFRDDLV---LGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKA 333
Query: 342 ALLTF 346
A F
Sbjct: 334 ARFMF 338
>gi|115477555|ref|NP_001062373.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|50725675|dbj|BAD33141.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113624342|dbj|BAF24287.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|215697775|dbj|BAG91968.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 581
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 164/506 (32%), Positives = 274/506 (54%), Gaps = 58/506 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI--WNQMIRGHAR 95
Q H+ + + +++L L+ Y + Y +A V + ++ + WN +I G+ R
Sbjct: 114 QFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWASDVVSWNTIIAGYIR 173
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
P K++ + QM ++ DE T +L CAR G + G H V+ +G+ N +I
Sbjct: 174 GGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNGFEINCYI 233
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
++L+++Y +CG+ ++ A ++F+ MP
Sbjct: 234 GSSLVSMY----AKCGM------------------------------VEEARRVFNRMPE 259
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
RNVV WT+MI+GC Q+G+ ++A+ LF +M+ A V D + +S+C ++G L LG+++
Sbjct: 260 RNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYL 319
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
H+Y + + +G+E +S+ N+LI MY+ CG++ +AY +F + +R+ +WT MI GFA
Sbjct: 320 HAYCDGH-GLGKE---LSVKNSLIDMYSKCGDVNKAYQIFHGLTKRDVFTWTVMIMGFAM 375
Query: 336 QGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
G EAL + FLGVL+ACSHGG V++G F M++ + + PRI
Sbjct: 376 NGLCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGGLVEQGYHHFHRMSKVYNLVPRI 435
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
EHYGCMVDL RA L+ EA +++MP+ P+ V SLL CR LA A++ +
Sbjct: 436 EHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVVWRSLLFACRASGQVGLAEYAAER-IE 494
Query: 440 EIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG 499
+++P++ G++ L++NVYA RW DV VR M K PG S+++++G +H+F AG
Sbjct: 495 QLEPKRCGGHV-LLSNVYATTLRWVDVNNVRTGMGNSRTSKKPGCSFIEVDGCIHEFFAG 553
Query: 500 DSTYKQASLIYKTLGEITMQAMQEGY 525
D ++ + I TL I + E +
Sbjct: 554 DESHFETEAICNTLFGINELLVAESF 579
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 163/517 (31%), Positives = 272/517 (52%), Gaps = 57/517 (11%)
Query: 39 IHSQIIINGFSQKNYI--LAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
+H+ ++ NG K+ + L+ YV L A +VF+ S W MI +
Sbjct: 247 MHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHC 306
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
+ V L+ +M+ + P+E T L+ C G G+ +H L +G+ ++ +
Sbjct: 307 NNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLA 366
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
T +++Y G+CG D+ A +FD +
Sbjct: 367 TAFIDMY----GKCG------------------------------DVRSARSVFDSFKSK 392
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
+++ W+ MIS AQN +A +F M + ++ +V+ L CA+ G L++GKWIH
Sbjct: 393 DLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIH 452
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
SY+++ G + L + + MYA+CG+I+ A+ +F + R+ W +MI+GFA
Sbjct: 453 SYIDKQGIKGD----MILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMH 508
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G+ + AL +TF+G L ACSH G + EG++ F M +G P++EH
Sbjct: 509 GHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEH 568
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YGCMVDL RAGL+DEA L+++MPM+PN AV GS L C++H N +L A++ ++ +
Sbjct: 569 YGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLS-L 627
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+P + +GY L++N+YA+A RW DVA +R+ M G+ K PG S +++NG+LH+F+ GD
Sbjct: 628 EPHK-SGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDR 686
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ A +Y+ + E+ + GY PD+S + I++
Sbjct: 687 EHPDAKKVYEMIDEMREKLEDAGYTPDVSCVLHNIDK 723
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 156/360 (43%), Gaps = 54/360 (15%)
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVH 141
+ AI + +I + ++ P + +Y M +TE D + +L C F G++VH
Sbjct: 88 NAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVH 147
Query: 142 GRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRG 201
G V+ +G+ +VF+ L+ +Y G + ARLLFD + + VVSW+++++ Y + G
Sbjct: 148 GFVVKNGFHGDVFVCNALIMMYSEVG---SLALARLLFDKIENKDVVSWSTMIRSYDRSG 204
Query: 202 DIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALS 261
+D +AL L +M RV ++ +++
Sbjct: 205 LLD-------------------------------EALDLLRDMHVMRVKPSEIGMISITH 233
Query: 262 ACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR 321
AE+ DLKLGK +H+YV N G+ V L ALI MY C + A VF + +
Sbjct: 234 VLAELADLKLGKAMHAYVMRNGKCGKSG--VPLCTALIDMYVKCENLAYARRVFDGLSKA 291
Query: 322 NTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFF 366
+ +SWT+MI + E + +T L ++ C G ++ G+
Sbjct: 292 SIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLH 351
Query: 367 ECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNN 426
+N G + +D++ + G + A S+ + K D ++ S ++ NN
Sbjct: 352 AFTLRN-GFTLSLVLATAFIDMYGKCGDVRSARSVFDS--FKSKDLMMWSAMISSYAQNN 408
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 175/506 (34%), Positives = 275/506 (54%), Gaps = 25/506 (4%)
Query: 33 TKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRG 92
++T Q+H+ + + ++ YI + LL Y + A +VFE + WN +I
Sbjct: 908 SRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITC 967
Query: 93 HARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASG-YCS 151
+ ++ +++ L+ M+ PDE T + ++S CA REG QVH RV+ S +
Sbjct: 968 YEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFRE 1027
Query: 152 NVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIF 210
++ + L+++Y +CG AR +FD M +RSVVS SL+ GY + +++ A +F
Sbjct: 1028 DMVLSNALVDMY----AKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVF 1083
Query: 211 DEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLK 270
+M +NV++W +I+ AQNG+ +AL LF ++R V L+AC + DL+
Sbjct: 1084 SQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQ 1143
Query: 271 LGKWIHSYV-EENFSVGREP-VLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTS 328
LG+ H +V +E F P V + N+L+ MY G I++ VF +M R+ VSW +
Sbjct: 1144 LGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNA 1203
Query: 329 MITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNW 373
MI G A+ G A++AL +T +GVLSAC H G V+EGR++F M ++
Sbjct: 1204 MIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDH 1263
Query: 374 GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQV 433
GI P +HY CM+DL RAG + E L++ M M+P+ + SLL CR+H N E+
Sbjct: 1264 GIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRLHKNVEMGEWA 1323
Query: 434 AQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVL 493
A KL E+DP + Y+ L++N+YA +W DV VR M GV K PG SW++I +
Sbjct: 1324 AGKLF-ELDPRNSGPYV-LLSNMYAELGKWADVFRVRSSMKHRGVSKQPGCSWIEIGRKV 1381
Query: 494 HDFVAGDSTYKQASLIYKTLGEITMQ 519
F+A D+ + + I+ L I MQ
Sbjct: 1382 SVFLARDNGHPCKNEIHAILRIIQMQ 1407
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 200/430 (46%), Gaps = 57/430 (13%)
Query: 41 SQIIINGFSQKNYILA-KLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
+Q + N K+ +++ +++ + G + +A +VFE + + WN M+ G+ RS
Sbjct: 306 AQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDL 365
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
++ L++QM + E D T +LS C +GE+VH + G+ S+ ++ L
Sbjct: 366 TGALLLFQQMRQETREFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNAL 425
Query: 160 MNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVV 219
+ +Y +CG C R S LL +F+ R+
Sbjct: 426 VRMY----SKCG--CLR------------SAERLL--------------LFEMGSERDSY 453
Query: 220 SWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY- 278
SW ++ISG ++ S AL +M+ + V +Q +AL+ACA I LK G IH+Y
Sbjct: 454 SWNSLISGYERHSMSEAALYALTKMQ-SEVTPNQSTFSSALAACANIFLLKQGMQIHAYM 512
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ + + + + +L S+ LI MY C + + + +F R+ + W SMI G A G
Sbjct: 513 IRKGYEI--DDILRSV---LIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGK 567
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
+ L +TFLG L +C G V GR +F M + I PRIEHY
Sbjct: 568 GEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLM-MDESIIPRIEHYE 626
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
CM++L + G M E V++MP +P A+ + CR + N +L + A K + + +P
Sbjct: 627 CMIELLGKHGCMVELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERAA-KCINDSNP 685
Query: 444 EQAAGYLALV 453
++A V
Sbjct: 686 LTPVQFVATV 695
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 195/413 (47%), Gaps = 37/413 (8%)
Query: 38 QIHSQIIINGFSQKNYILAK-LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
Q+H I F Q N IL L+ Y L +A + F+ P+ WN ++R + +
Sbjct: 172 QLHGHIAKRDF-QSNVILGTALVDVYGNCFLLADARRAFDDILEPNAISWNVIVRRYHLA 230
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
+ +V ++ +M+ P YT S + C EG +H VL GY +V +R
Sbjct: 231 GMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVR 290
Query: 157 TNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
++++++Y +CG + A+ LF+ P + +V S++ G G I A ++F+ M
Sbjct: 291 SSVVDMY----AKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKE 346
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
RN+VSW M++G ++ AL LF +MR+ D + L + LSAC I D+ G+ +
Sbjct: 347 RNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGKGEEV 406
Query: 276 HSYVEEN--FSVGREPVLVSLNNALIHMYASCGEIEEAYG--VFRKMQRRNTVSWTSMIT 331
H++ + FS P+ L NAL+ MY+ CG + A +F R++ SW S+I+
Sbjct: 407 HAFAIKCGFFS---SPI---LKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLIS 460
Query: 332 GFAKQGYAQEALL--------------TFLGVLSACSHGGFVDEGRQFFECM-NQNWGIK 376
G+ + ++ AL TF L+AC++ + +G Q M + + I
Sbjct: 461 GYERHSMSEAALYALTKMQSEVTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEID 520
Query: 377 PRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL-GSLLLGCRIHNNAE 428
+ ++D++ + D + + + P + D +L S++ GC E
Sbjct: 521 DILR--SVLIDMYCKCRQFDYSIRIFEARPSR--DVILWNSMIFGCAYSGKGE 569
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 150/339 (44%), Gaps = 86/339 (25%)
Query: 48 FSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYK 107
F + ++L L++ Y G L +A +VF++ +P+T +N ++ HAR P + L+
Sbjct: 791 FVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALFH 850
Query: 108 QMIDKETEPDE-----------------------------------YTYSFLLSVCARCG 132
+ D PD+ Y+++ LS CA
Sbjct: 851 AIPD----PDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEK 906
Query: 133 LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGC-----ARLLFDDMPARSV 187
R G QVH V S + +V+I + L+++Y C AR +F+ MP R++
Sbjct: 907 DSRTGVQVHALVSKSPHAKDVYIGSALLDMY--------AKCEWPEEARRVFEAMPERNI 958
Query: 188 VSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRA 247
VSWNSL+ Y QNG +AL LF M +A
Sbjct: 959 VSWNSLITCY-------------------------------EQNGPVGEALVLFVSMMKA 987
Query: 248 RVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGE 307
D+V L + +SACA + + G+ +H+ V ++ + V L+NAL+ MYA CG
Sbjct: 988 GFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMV---LSNALVDMYAKCGR 1044
Query: 308 IEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
A VF +M R+ VS TS+ITG+A+ ++A + F
Sbjct: 1045 TRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVF 1083
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 142/311 (45%), Gaps = 27/311 (8%)
Query: 145 LASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDID 204
L S + + F+ L++ Y G + AR +FD++P + S+N+LL + + G
Sbjct: 787 LKSPFVAETFLLNTLVSAYARLGR---LPDARRVFDEIPHPNTFSYNALLSAHARLGRPA 843
Query: 205 GAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACA 264
A +F +P + S+ +I+ AQ+ + AL M L+ + +ALSACA
Sbjct: 844 DARALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACA 903
Query: 265 EIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTV 324
D + G +H+ V ++ V + +AL+ MYA C EEA VF M RN V
Sbjct: 904 AEKDSRTGVQVHALVSKSPHAKD----VYIGSALLDMYAKCEWPEEARRVFEAMPERNIV 959
Query: 325 SWTSMITGFAKQGYAQEALLTFL---------------GVLSACSHGGFVDEGRQFFECM 369
SW S+IT + + G EAL+ F+ V+SAC+ EGRQ +
Sbjct: 960 SWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARV 1019
Query: 370 NQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLG--SLLLGCRIHNNA 427
++ + + +VD++++ G A + M + +V+ SL+ G N
Sbjct: 1020 VKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASR---SVVSETSLITGYARSANV 1076
Query: 428 ELASQVAQKLV 438
E A V ++V
Sbjct: 1077 EDAQMVFSQMV 1087
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 108/238 (45%), Gaps = 37/238 (15%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKV--FEKTENPSTAIWNQMIRGHAR 95
++H+ I GF + L+ Y G L +A ++ FE + WN +I G+ R
Sbjct: 405 EVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYER 464
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
E ++Y +M E P++ T+S L+ CA L ++G Q+H ++ GY + +
Sbjct: 465 HSMSEAALYALTKM-QSEVTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDIL 523
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
R+ L+++Y K D + +IF+ P
Sbjct: 524 RSVLIDMY----------------------------------CKCRQFDYSIRIFEARPS 549
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK 273
R+V+ W +MI GCA +GK L LF+EM++ + D V + AL +C G ++LG+
Sbjct: 550 RDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGR 607
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 185/440 (42%), Gaps = 58/440 (13%)
Query: 52 NYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMID 111
++ + + G + +A ++F+ WN +I +R+ P +++ L+ M
Sbjct: 85 TFLFNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNS 144
Query: 112 KETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG 171
P + T + +LS CA C Q+HG + + SNV + T L+++Y G C
Sbjct: 145 LGIRPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVY----GNCF 200
Query: 172 -VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMIS---- 226
+ AR FDD+ + +SWN +++ Y G D A +F M V +S
Sbjct: 201 LLADARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVL 260
Query: 227 GCAQN-----GKSRQALSLFNEMR-----RARVGLDQVALVAALSACAEIGDLKLGKWIH 276
C N G+ A L + R+ V +D A A+ A + +L K +
Sbjct: 261 ACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSV-VDMYAKCGAMDAAQSLFNLAPMKDM- 318
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
++ +++ ASCG I +A VF M+ RN VSW +M+TG+ +
Sbjct: 319 ----------------VMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRS 362
Query: 337 GYAQEALLTF--------------LG-VLSACSHGGFVDEGR-QFFECMNQNWGIKPRIE 380
ALL F LG VLSAC+ G +D G+ + G
Sbjct: 363 MDLTGALLLFQQMRQETREFDAITLGSVLSACT--GILDIGKGEEVHAFAIKCGFFSSPI 420
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQ-NMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
+V ++S+ G + A L+ M + + SL+ G H+ +E A K+ +
Sbjct: 421 LKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQS 480
Query: 440 EIDPEQA--AGYLALVANVY 457
E+ P Q+ + LA AN++
Sbjct: 481 EVTPNQSTFSSALAACANIF 500
>gi|255570475|ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534500|gb|EEF36200.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 491
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 171/497 (34%), Positives = 280/497 (56%), Gaps = 27/497 (5%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSG---YLI 69
+S+ +++ LL T + QI + + ++G + Y AK+++F S L
Sbjct: 3 SSTYVKASKKTLFLLDKCRTISQIKQIQTHLTVSGTLKDPYAAAKIISFCALSSNQFSLS 62
Query: 70 NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
+A+++F + ST IWN +IR A P K++ L+K M+ P+ YTYSFL C
Sbjct: 63 HAYRLFLGLRHRSTFIWNTVIRAFAEKNEPRKAIMLFKNMLYSNFLPNNYTYSFLFKACT 122
Query: 130 RCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVS 189
G H + + G+ F++ L++++ + G C + AR LFD R V++
Sbjct: 123 DLNNLYLGLACHCQSIKLGWEFYDFVQNGLVHMFAIFG--C-MDSARKLFDLSSNRDVIT 179
Query: 190 WNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARV 249
W +L+ GYV+ G + ++FD+MP RN VSW+ MI+G + G +AL LFN M +
Sbjct: 180 WTALINGYVRAGQVLIGRELFDKMPERNSVSWSAMITGYVRVGFFEEALELFNAMLISGF 239
Query: 250 GLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIE 309
+ +V A++ACA +G L G+WIH Y++ N R + + ALI MYA CG IE
Sbjct: 240 WPNHAGIVCAINACASLGALDQGRWIHCYIKRN----RMDLDRVMGAALIDMYAKCGCIE 295
Query: 310 EAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACS 354
A +F +++ R+ +T +I+G A G + A+ +TF+ VL+ACS
Sbjct: 296 IACSIFGELRNRDVHVYTCLISGLANHGQSATAVELFERMHSEGVVPNEVTFVSVLNACS 355
Query: 355 HGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL 414
G VD+G + FE M++ +G +P+++HYGC+VDL RAG ++EA LV+ MPMKP+ VL
Sbjct: 356 RMGLVDKGLRIFENMSKIYGDEPQVQHYGCLVDLLGRAGKLEEAKKLVKEMPMKPDSYVL 415
Query: 415 GSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMI 474
G+LL R++ + EL + + L A++ + + ++ L +N+YA+A +W +VA VR+ M
Sbjct: 416 GALLNASRVYGDVELGEETVESL-AQLSLDHSGVHVVL-SNMYASANKWDEVARVRRGMG 473
Query: 475 KMGVRKPPGQSWVQING 491
VRK PG S ++++G
Sbjct: 474 DKKVRKVPGCSLIKVDG 490
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/516 (32%), Positives = 266/516 (51%), Gaps = 55/516 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H++ + ++L LL Y G L A +VF++ +PST W +I + +
Sbjct: 139 QLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAG 198
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++V++ + PD +T +L+ CAR GE V G +VF+ T
Sbjct: 199 DLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVAT 258
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
++LY VK G++ A ++FD+M ++
Sbjct: 259 AAVDLY----------------------------------VKCGEMAKAREVFDKMRDKD 284
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
V+W M+ G A NG R+AL LF M+ V D A+ ALSAC +G L LG+
Sbjct: 285 AVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIR 344
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
V+ + + PVL ALI MYA CG EA+ VF++M++++ + W +MI G G
Sbjct: 345 MVDWDEFLD-NPVL---GTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTG 400
Query: 338 YAQEALL---------------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+ + A TF+G+L +C+H G + +GR++F M + + I PRIEHY
Sbjct: 401 HEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHY 460
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
GC+VDL SRAGL+ EA L+ +MPM N +LG+LL GC+IH NAELA V +L+ ++
Sbjct: 461 GCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLI-RLE 519
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P + Y+ +++N+Y+ RW+D A +R M + GV K P SWV+ G +H+F GD +
Sbjct: 520 PWNSGNYV-MLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKS 578
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ + IYK L E+ ++ GY+P + +E+
Sbjct: 579 HPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVED 614
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 154/420 (36%), Positives = 253/420 (60%), Gaps = 56/420 (13%)
Query: 135 REGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLL 194
R GE +H V+ SG+ S ++++ +L++LY CG
Sbjct: 5 RLGETIHSVVIRSGFGSLIYVQNSLLHLY----ANCG----------------------- 37
Query: 195 KGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQV 254
D+ A+K+FD+MP +++V+W ++I+G A+NGK +AL+L+ EM + D
Sbjct: 38 -------DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGF 90
Query: 255 ALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGV 314
+V+ LSACA+IG L LGK +H Y+ VG L S +N L+ +YA CG +EEA +
Sbjct: 91 TIVSLLSACAKIGALTLGKRVHVYM---IKVGLTRNLHS-SNVLLDLYARCGRVEEAKTL 146
Query: 315 FRKMQRRNTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGF 358
F +M +N+VSWTS+I G A G+ +EA+ +TF+G+L ACSH G
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLL 418
V EG ++F M + + I+PRIEH+GCMVDL +RAG + +A+ +++MPM+PN + +LL
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Query: 419 LGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
C +H +++LA + A+ + +++P + Y+ L++N+YA+ +RW DV +R++M++ GV
Sbjct: 267 GACTVHGDSDLA-EFARIQILQLEPNHSGDYV-LLSNMYASEQRWSDVQKIRKQMLRDGV 324
Query: 479 RKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+K PG S V++ +H+F+ GD ++ Q+ IY L E+T + EGY P IS +++ +EE
Sbjct: 325 KKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEE 384
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 142/315 (45%), Gaps = 41/315 (13%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
IHS +I +GF Y+ LL Y G + +A+KVF+K WN +I G A +
Sbjct: 10 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 69
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
PE+++ LY +M K +PD +T LLS CA+ G G++VH ++ G N+
Sbjct: 70 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNV 129
Query: 159 LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L++LY CG V A+ LFD+M ++ VSW
Sbjct: 130 LLDLY----ARCGRVEEAKTLFDEMVDKNSVSW--------------------------- 158
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLD-QVALVAALSACAEIGDLKLGKWIH 276
T++I G A NG ++A+ LF M L ++ V L AC+ G +K G
Sbjct: 159 ----TSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYF 214
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAK 335
+ E + + EP + ++ + A G++++AY + M + N V W +++
Sbjct: 215 RRMREEYKI--EPRIEHF-GCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTV 271
Query: 336 QGYAQEALLTFLGVL 350
G + A + +L
Sbjct: 272 HGDSDLAEFARIQIL 286
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 91/171 (53%), Gaps = 23/171 (13%)
Query: 266 IGDLKLGKWIHSYV-EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTV 324
+ D++LG+ IHS V F L+ + N+L+H+YA+CG++ AY VF KM ++ V
Sbjct: 1 MADVRLGETIHSVVIRSGFGS-----LIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 55
Query: 325 SWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECM 369
+W S+I GFA+ G +EAL T + +LSAC+ G + G++ M
Sbjct: 56 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 115
Query: 370 NQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
+ G+ + ++DL++R G ++EA +L M K N SL++G
Sbjct: 116 IK-VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK-NSVSWTSLIVG 164
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 83/202 (41%), Gaps = 35/202 (17%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H +I G ++ + LL Y G + A +F++ + ++ W +I G A +
Sbjct: 110 RVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNG 169
Query: 98 TPEKSVYLYKQMIDKE-TEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
++++ L+K M E P E T+ +L C+ CG+ +EG + R
Sbjct: 170 FGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRR------------- 216
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
+ Y + GC D+ AR+ G + A++ MP +
Sbjct: 217 --MREEYKIEPRIEHFGC----MVDLLARA--------------GQVKKAYEYIKSMPMQ 256
Query: 217 -NVVSWTTMISGCAQNGKSRQA 237
NVV W T++ C +G S A
Sbjct: 257 PNVVIWRTLLGACTVHGDSDLA 278
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 174/546 (31%), Positives = 283/546 (51%), Gaps = 60/546 (10%)
Query: 6 IIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFY--- 62
+ P P S+ T SLL + + L Q+ + I +L K + F
Sbjct: 8 VTPMCPPNSNS--NTTHPLSLLPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFINFCSLN 65
Query: 63 VTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYS 122
T+ + +AH +F++ P ++N M RG+AR++TP ++ L+ Q++ PD+YT+
Sbjct: 66 PTTTSMQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFP 125
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDM 182
LL CA C EG Q+H + G NV++ L+N+Y + CAR +FD +
Sbjct: 126 SLLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACN---EMDCARRVFDKI 182
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
VV++N+++ GY + + A +F E+ RN+
Sbjct: 183 WEPCVVTYNAMITGYARGSRPNEALSLFRELQARNLKP---------------------- 220
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMY 302
V +++ LS+CA +G L LGKW+H YV++N R V ++ ALI MY
Sbjct: 221 ---------TDVTMLSVLSSCALLGALDLGKWMHEYVKKN-GFNR---FVKVDTALIDMY 267
Query: 303 ASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFL 347
A CG +++A VF M R+T +W++MI +A G+ +A+ +TFL
Sbjct: 268 AKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFL 327
Query: 348 GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM 407
G+L ACSH G V+EG ++F M +G+ P I+HYGCMVDL RAG ++EA+ + +P+
Sbjct: 328 GLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPI 387
Query: 408 KPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVA 467
+P + +LL C H N EL +V +++ E+D Y+ L +N+ A A RW+DV
Sbjct: 388 RPTPILWRTLLSACGSHGNVELGKRVIEQIF-ELDDSHGGDYIIL-SNLCARAGRWEDVN 445
Query: 468 AVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
VR+ M + GV K PG S V++N V+H+F +GD + ++ +++ L E+ + GY P
Sbjct: 446 YVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDELVKELKLVGYVP 505
Query: 528 DISELF 533
+ S +F
Sbjct: 506 NTSLVF 511
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/494 (34%), Positives = 275/494 (55%), Gaps = 54/494 (10%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
L+ +V L +A +F+K WN MI G+A+ ++ +++ D+ D
Sbjct: 210 LMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQA----RRLFDESPTRD 265
Query: 118 EYTYSFLLSVCARCGLFREGE----------QVHGRVLASGYCSNVFIRTNLMNLYLMSG 167
+T++ ++S + G+ E + +V + +GY ++T M++
Sbjct: 266 VFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGY-----VQTKKMDI----- 315
Query: 168 GECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISG 227
AR LF+ MP R++ SWN+++ GY + GDI A K FD MP R+ VSW +I+G
Sbjct: 316 -------ARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAG 368
Query: 228 CAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY-VEENFSVG 286
AQ+G +AL++F E+++ L++ ALS CA+I L+LGK IH V+ + G
Sbjct: 369 YAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTG 428
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--- 343
+ NAL+ MY CG I+EA F ++ ++ VSW +M+ G+A+ G+ ++AL
Sbjct: 429 -----CFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVF 483
Query: 344 ------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSR 391
+T +GVLSACSH G +D G ++F M +++G+ P +HY CM+DL R
Sbjct: 484 ESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGR 543
Query: 392 AGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLA 451
AG ++EA L++NMP +P A G+LL RIH N EL + A+ +V +++P Q +G
Sbjct: 544 AGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAE-MVFKMEP-QNSGMYV 601
Query: 452 LVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYK 511
L++N+YAA+ RW D +R KM +GV+K PG SWV++ +H F GD ++ + IY
Sbjct: 602 LLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYA 661
Query: 512 TLGEITMQAMQEGY 525
L E+ ++ +EGY
Sbjct: 662 YLEELDLKMREEGY 675
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 151/353 (42%), Gaps = 81/353 (22%)
Query: 57 KLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEP 116
K ++ ++ +G+ +A VF S+ +N MI G+ R+ L + + D+ E
Sbjct: 54 KAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRN----SKFNLARNLFDQMPER 109
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCAR 176
D ++++ +L+ GY N C +G AR
Sbjct: 110 DLFSWNVMLT---------------------GYVRN-----------------CRLGDAR 131
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
LFD MP + VVSWNSLL GY + G +D A ++FD MP +N +SW +++ NG+ +
Sbjct: 132 RLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEE 191
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN- 295
A LF ++ D ++ + L +W+ + PV +++
Sbjct: 192 ACLLF----ESKSDWDLISWNCLMGGFVRKKKLGDARWLFD---------KMPVRDAISW 238
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSH 355
N +I YA G + +A +F + R+ +WT+M++G+ +
Sbjct: 239 NTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQN------------------- 279
Query: 356 GGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
G +DE + FF+ M + + Y M+ + + MD A L ++MP +
Sbjct: 280 -GMLDEAKTFFDEMPEKNEVS-----YNAMIAGYVQTKKMDIARELFESMPCR 326
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 122/539 (22%), Positives = 213/539 (39%), Gaps = 100/539 (18%)
Query: 10 NPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLI 69
N AT AL+T + L++ QIH Q + G+ ++ LLA Y G +
Sbjct: 393 NRATFGCALSTCADIAALELGK------QIHGQAVKMGYGTGCFVGNALLAMYFKCGSID 446
Query: 70 NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
A+ FE E WN M+ G+AR +++ +++ M +PDE T +LS C+
Sbjct: 447 EANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACS 506
Query: 130 RCGLFREG-EQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPAR-SV 187
GL G E + G T +++L +G + A+ L +MP +
Sbjct: 507 HTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAG---RLEEAQDLIRNMPFQPGA 563
Query: 188 VSWNSLLKGYVKRGDI---DGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
SW +LL G+ + A ++ +M +N + + + A +G+ A + ++M
Sbjct: 564 ASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKM 623
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLG-------KWIHSYVEENFSVGREPVLVSLNNA 297
R +G+ +V + + +I +G + I++Y+EE RE VSL
Sbjct: 624 R--DIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKL 681
Query: 298 LIH----------MYASCGEIEEAYGVF--------RKMQR-------RNTVSWTSMITG 332
++H + ++ A+G+ R M+ + + S I G
Sbjct: 682 VLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVG 741
Query: 333 ------------FAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
+G+ L + G +D G ++F MN+ + + P +
Sbjct: 742 RLIILRDSHRFHHFNEGFCSCGDYWLQFFLLVVIYTGLLDTGAEYFYPMNEEYSVTPTSK 801
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HY CM+DL R ++E G+LL RIH N EL + AQ + +
Sbjct: 802 HYTCMIDLLGRVDRLEE-----------------GALLGASRIHGNTELGEKAAQ-MFFK 843
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG 499
+ P+ + KM +GV+K PG SW ++ +H F G
Sbjct: 844 MGPQNSG----------------------ISKMRDVGVQKVPGYSWFEVQNKIHTFSVG 880
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 126/293 (43%), Gaps = 35/293 (11%)
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
++ WN + +++ G D A +F+ MP R+ VS+ MISG +N K A +LF++M
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC 305
+ V L + C +GD + F + E +VS N+L+ YA
Sbjct: 108 ERDLFSWNVMLTGYVRNC-RLGDAR----------RLFDLMPEKDVVSW-NSLLSGYAQN 155
Query: 306 GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLG------VLSACSHGGFV 359
G ++EA VF M +N++SW ++ + G +EA L F + C GGFV
Sbjct: 156 GYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFV 215
Query: 360 -----DEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL 414
+ R F+ M I + M+ +++ G + +A L P + D
Sbjct: 216 RKKKLGDARWLFDKMPVRDAIS-----WNTMISGYAQGGGLSQARRLFDESPTR--DVFT 268
Query: 415 GSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVA 467
+ ++ + N A+ E+ + Y A++A Y K+ D+A
Sbjct: 269 WTAMVSGYVQNG---MLDEAKTFFDEMPEKNEVSYNAMIAG-YVQTKK-MDIA 316
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 171/507 (33%), Positives = 279/507 (55%), Gaps = 54/507 (10%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
L+ +V L +A +F+K WN MI G+A+ ++ +++ D+ D
Sbjct: 210 LMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQA----RRLFDESPTRD 265
Query: 118 EYTYSFLLSVCARCGLFREGE----------QVHGRVLASGYCSNVFIRTNLMNLYLMSG 167
+T++ ++S + G+ E + +V + +GY ++T M++
Sbjct: 266 VFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGY-----VQTKKMDI----- 315
Query: 168 GECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISG 227
AR LF+ MP R++ SWN+++ GY + GDI A K FD MP R+ VSW +I+G
Sbjct: 316 -------ARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAG 368
Query: 228 CAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY-VEENFSVG 286
AQ+G +AL++F E+++ L++ ALS CA+I L+LGK IH V+ + G
Sbjct: 369 YAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTG 428
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--- 343
+ NAL+ MY CG I+EA F ++ ++ VSW +M+ G+A+ G+ ++AL
Sbjct: 429 -----CFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVF 483
Query: 344 ------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSR 391
+T +GVLSACSH G +D G ++F M +++G+ P +HY CM+DL R
Sbjct: 484 ESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGR 543
Query: 392 AGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLA 451
AG ++EA L++NMP +P A G+LL RIH N EL + A+ +V +++P Q +G
Sbjct: 544 AGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAE-MVFKMEP-QNSGMYV 601
Query: 452 LVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYK 511
L++N+YAA+ RW D +R KM +GV+K PG SWV++ +H F GD ++ + IY
Sbjct: 602 LLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYA 661
Query: 512 TLGEITMQAMQEGYKPDISELFLGIEE 538
L E+ ++ +EGY + +EE
Sbjct: 662 YLEELDLKMREEGYVSLTKLVLHDVEE 688
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 151/353 (42%), Gaps = 81/353 (22%)
Query: 57 KLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEP 116
K ++ ++ +G+ +A VF S+ +N MI G+ R+ L + + D+ E
Sbjct: 54 KAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRN----SKFNLARNLFDQMPER 109
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCAR 176
D ++++ +L+ GY N C +G AR
Sbjct: 110 DLFSWNVMLT---------------------GYVRN-----------------CRLGDAR 131
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
LFD MP + VVSWNSLL GY + G +D A ++FD MP +N +SW +++ NG+ +
Sbjct: 132 RLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEE 191
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN- 295
A LF ++ D ++ + L +W+ + PV +++
Sbjct: 192 ACLLF----ESKSDWDLISWNCLMGGFVRKKKLGDARWLFD---------KMPVRDAISW 238
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSH 355
N +I YA G + +A +F + R+ +WT+M++G+ +
Sbjct: 239 NTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQN------------------- 279
Query: 356 GGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
G +DE + FF+ M + + Y M+ + + MD A L ++MP +
Sbjct: 280 -GMLDEAKTFFDEMPEKNEVS-----YNAMIAGYVQTKKMDIARELFESMPCR 326
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 28/234 (11%)
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
++ WN + +++ G D A +F+ MP R+ VS+ MISG +N K A +LF++M
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC 305
+ V L + C +GD + F + E +VS N+L+ YA
Sbjct: 108 ERDLFSWNVMLTGYVRNC-RLGDAR----------RLFDLMPEKDVVSW-NSLLSGYAQN 155
Query: 306 GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLG------VLSACSHGGFV 359
G ++EA VF M +N++SW ++ + G +EA L F + C GGFV
Sbjct: 156 GYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFV 215
Query: 360 -----DEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
+ R F+ M I + M+ +++ G + +A L P +
Sbjct: 216 RKKKLGDARWLFDKMPVRDAIS-----WNTMISGYAQGGGLSQARRLFDESPTR 264
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 132/303 (43%), Gaps = 23/303 (7%)
Query: 10 NPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLI 69
N AT AL+T + L++ QIH Q + G+ ++ LLA Y G +
Sbjct: 393 NRATFGCALSTCADIAALELGK------QIHGQAVKMGYGTGCFVGNALLAMYFKCGSID 446
Query: 70 NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
A+ FE E WN M+ G+AR +++ +++ M +PDE T +LS C+
Sbjct: 447 EANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACS 506
Query: 130 RCGLFREG-EQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPAR-SV 187
GL G E + G T +++L +G + A+ L +MP +
Sbjct: 507 HTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAG---RLEEAQDLIRNMPFQPGA 563
Query: 188 VSWNSLLKGYVKRGDI---DGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
SW +LL G+ + A ++ +M +N + + + A +G+ A + ++M
Sbjct: 564 ASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKM 623
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLG-------KWIHSYVEENFSVGREPVLVSLNNA 297
R +G+ +V + + +I +G + I++Y+EE RE VSL
Sbjct: 624 R--DIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKL 681
Query: 298 LIH 300
++H
Sbjct: 682 VLH 684
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/516 (32%), Positives = 266/516 (51%), Gaps = 55/516 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H++ + ++L LL Y G L A +VF++ +PST W +I + +
Sbjct: 92 QLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAG 151
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++V++ + PD +T +L+ CAR GE V G +VF+ T
Sbjct: 152 DLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVAT 211
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
++LY VK G++ A ++FD+M ++
Sbjct: 212 AAVDLY----------------------------------VKCGEMAKAREVFDKMRDKD 237
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
V+W M+ G A NG R+AL LF M+ V D A+ ALSAC +G L LG+
Sbjct: 238 AVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIR 297
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
V+ + + PVL ALI MYA CG EA+ VF++M++++ + W +MI G G
Sbjct: 298 MVDWDEFLD-NPVL---GTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTG 353
Query: 338 YAQEALL---------------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+ + A TF+G+L +C+H G + +GR++F M + + I PRIEHY
Sbjct: 354 HEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHY 413
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
GC+VDL SRAGL+ EA L+ +MPM N +LG+LL GC+IH NAELA V +L+ ++
Sbjct: 414 GCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLI-RLE 472
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P + Y+ +++N+Y+ RW+D A +R M + GV K P SWV+ G +H+F GD +
Sbjct: 473 PWNSGNYV-MLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKS 531
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ + IYK L E+ ++ GY+P + +E+
Sbjct: 532 HPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVED 567
>gi|15217517|ref|NP_174603.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168867|sp|Q9C501.1|PPR70_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g33350
gi|12322383|gb|AAG51215.1|AC051630_12 unknown protein; 15445-13829 [Arabidopsis thaliana]
gi|12322567|gb|AAG51281.1|AC027035_4 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193465|gb|AEE31586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 538
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 167/505 (33%), Positives = 277/505 (54%), Gaps = 33/505 (6%)
Query: 36 LFQIHSQIIINGFSQKNYILAKLLAF-YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHA 94
L Q+ S +I++G S +++ KLL F + L A +F++ P+T ++ ++ ++
Sbjct: 40 LKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAYS 99
Query: 95 RSETPEKS--VYLYKQMIDKET-EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCS 151
S S ++ M+++ P+ + Y +L VH + SG+
Sbjct: 100 SSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHL 159
Query: 152 NVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFD 211
V ++T L++ Y S + AR LFD+M R+VVSW ++L GY + GDI A +F+
Sbjct: 160 YVVVQTALLHSYASSVSH--ITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFE 217
Query: 212 EMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM-RRARVGLDQVALVAALSACAEIGDLK 270
+MP R+V SW +++ C QNG +A+SLF M + ++V +V LSACA+ G L+
Sbjct: 218 DMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQ 277
Query: 271 LGKWIHSYV-EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSM 329
L K IH++ + S V ++N+L+ +Y CG +EEA VF+ +++ +W SM
Sbjct: 278 LAKGIHAFAYRRDLSSD-----VFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSM 332
Query: 330 ITGFAKQGYAQEAL------------------LTFLGVLSACSHGGFVDEGRQFFECMNQ 371
I FA G ++EA+ +TF+G+L+AC+HGG V +GR +F+ M
Sbjct: 333 INCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTN 392
Query: 372 NWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELAS 431
+GI+PRIEHYGC++DL RAG DEA ++ M MK ++A+ GSLL C+IH + +LA
Sbjct: 393 RFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAE 452
Query: 432 QVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQING 491
+ LVA ++P GY+A++AN+Y W++ R+ + KPPG S ++I+
Sbjct: 453 VAVKNLVA-LNPNN-GGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDN 510
Query: 492 VLHDFVAGDSTYKQASLIYKTLGEI 516
+H F + D ++ + IY L +
Sbjct: 511 EVHQFYSLDKSHPETEEIYMILDSL 535
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 167/527 (31%), Positives = 278/527 (52%), Gaps = 60/527 (11%)
Query: 30 RNTTKTL-FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQ 88
R +++ L +HS ++ GF+ + LL+ Y SG L +AHK+F++ + S W
Sbjct: 123 RASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTA 182
Query: 89 MIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASG 148
+ G+ S +++ L+K+M++ +PD Y +LS C G GE + +
Sbjct: 183 LFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEME 242
Query: 149 YCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWK 208
N F+RT L+NLY K G ++ A
Sbjct: 243 MQKNSFVRTTLVNLY----------------------------------AKCGKMEKARS 268
Query: 209 IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGD 268
+FD M +++V+W+TMI G A N ++ + LF +M + + DQ ++V LS+CA +G
Sbjct: 269 VFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGA 328
Query: 269 LKLGKWIHSYVEENFSVGREPVLVSL--NNALIHMYASCGEIEEAYGVFRKMQRRNTVSW 326
L LG+W S ++ R L +L NALI MYA CG + + VF++M+ ++ V
Sbjct: 329 LDLGEWGISLID------RHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIM 382
Query: 327 TSMITGFAKQGYAQEALL---------------TFLGVLSACSHGGFVDEGRQFFECMNQ 371
+ I+G AK G+ + + TFLG+L C H G + +G +FF ++
Sbjct: 383 NAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISC 442
Query: 372 NWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELAS 431
+ +K +EHYGCMVDL+ RAG++D+A+ L+ +MPM+PN V G+LL GCR+ + +LA
Sbjct: 443 VYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAE 502
Query: 432 QVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQING 491
V ++L+A ++P A Y+ L +N+Y+ RW + A VR M K G++K PG SW+++ G
Sbjct: 503 TVLKELIA-LEPWNAGNYVQL-SNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEG 560
Query: 492 VLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+H+F+A D ++ + IY L ++ + G+ P +F +EE
Sbjct: 561 KVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEE 607
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 128/287 (44%), Gaps = 26/287 (9%)
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG 250
N LLK + ++ +F N+ + ++I+G N + L LF +R+ +
Sbjct: 49 NLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLY 108
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEE 310
L L AC KLG +HS V G + ++ +L+ +Y+ G + +
Sbjct: 109 LHGFTFPLVLKACTRASSRKLGIDLHSLV---VKCGFNHDVAAM-TSLLSIYSGSGRLND 164
Query: 311 AYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF---------------LGVLSACSH 355
A+ +F ++ R+ V+WT++ +G+ G +EA+ F + VLSAC H
Sbjct: 165 AHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVH 224
Query: 356 GGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLG 415
G +D G + M + K +V+L+++ G M++A S+ +M K D V
Sbjct: 225 VGDLDSGEWIVKYMEEMEMQKNSFVR-TTLVNLYAKCGKMEKARSVFDSMVEK--DIVTW 281
Query: 416 SLLLGCRIHNN--AELASQVAQKLVAEIDPEQAA--GYLALVANVYA 458
S ++ N+ E Q L + P+Q + G+L+ A++ A
Sbjct: 282 STMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGA 328
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 177/560 (31%), Positives = 298/560 (53%), Gaps = 69/560 (12%)
Query: 35 TLFQIHSQIIINGFSQKNYILA-KLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGH 93
TL ++H +++ + + + N + KL+ Y G A +F++ + + +N MIR +
Sbjct: 36 TLKKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSY 95
Query: 94 ARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNV 153
+ + ++ +YK M + PD YTY +L +R G Q+HG VL G N+
Sbjct: 96 VNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNL 155
Query: 154 FIRTNLMNLYLMSGGEC-GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDE 212
++ L+ +Y G+C + A+ + D++P R VVSWNS++ Y + G + A ++ E
Sbjct: 156 YVGNGLIAMY----GKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCRE 211
Query: 213 M-------------------------------------PHRNVVSWTTMISGCAQNGKSR 235
M ++V+SW MI+ N +
Sbjct: 212 MEALNLKPNDCTMASLLPAVTNTTSDNVLYVKEMFLKLTKKSVISWNVMIAMYVNNSMPK 271
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL- 294
+A+ L+++M V D V++V+ L A ++ L LG+ +H + E R+ +L +L
Sbjct: 272 EAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAE------RKKLLPNLL 325
Query: 295 -NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------- 343
NALI MYA CG + +A VF +MQ R+ VSWTS+I+ + K G ++A+
Sbjct: 326 LENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSG 385
Query: 344 -----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEA 398
+ F+ VL+ACSH G +D+GR +F M + GI P++EH+ C+VDL RAG +DEA
Sbjct: 386 LNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAE-CGITPKLEHFACVVDLLGRAGKIDEA 444
Query: 399 FSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYA 458
+ ++ MP++P++ V G LL CR+++N + A KL+ ++PE + GY L++N+YA
Sbjct: 445 YGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLM-LNPEHS-GYYVLLSNIYA 502
Query: 459 AAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITM 518
A RW DVAA+R M + G++K PG S V++N +H F+AGD ++ Q+ IY+ L +
Sbjct: 503 KAGRWADVAAIRSIMERKGIKKLPGISNVELNDGVHTFLAGDHSHPQSKKIYEELDVLVG 562
Query: 519 QAMQEGYKPDISELFLGIEE 538
+ + GY P+ +EE
Sbjct: 563 KMKELGYMPETDSALHDVEE 582
>gi|224141427|ref|XP_002324074.1| predicted protein [Populus trichocarpa]
gi|222867076|gb|EEF04207.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 179/530 (33%), Positives = 284/530 (53%), Gaps = 33/530 (6%)
Query: 30 RNTT-KTLFQIHSQIIINGF---SQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI 85
RN++ T ++H+ I+ +G S ++L L Y + G +A +F + +
Sbjct: 27 RNSSLSTGKKLHAVILTSGLASSSPNTFLLNALHHLYASCGVTSSARHLFYQIPRSHKDV 86
Query: 86 --WNQMIRGHARSET-PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHG 142
W ++ + T P + + +K+M + D+ + +C R G Q G
Sbjct: 87 TDWTTLLTSLVQHGTKPSEGFFFFKEMRKEGVVLDDVAMISVFVLCTRVEDLGMGRQAQG 146
Query: 143 RVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRG 201
++ G V + +MN+Y+ +CG V R +F +M R+VVSW++LL+G VK
Sbjct: 147 CLVKMGLGLGVKVCNAIMNMYV----KCGLVEEVRRVFCEMNERNVVSWSTLLEGVVKWE 202
Query: 202 DIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM-RRARVGLDQVALVAAL 260
++ +FDEMP RN V WT MI+G NG SR+ L +EM R R+GL+ V L + L
Sbjct: 203 GVENGRVVFDEMPERNEVGWTIMIAGYVGNGFSREGFLLLDEMVLRFRLGLNFVTLSSIL 262
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
SACA+ GD+ +G+W+H Y + +GRE + + + AL+ MYA CG I+ A+ VF+ + +
Sbjct: 263 SACAQSGDVLMGRWVHVYALKG--MGRE-MHIMVGTALVDMYAKCGPIDMAFKVFKYLPK 319
Query: 321 RNTVSWTSMITGFAKQGYAQEAL--------------LTFLGVLSACSHGGFVDEGRQFF 366
RN V+W +M+ G A G + L LTF+ VLSACSH G VD+G +F
Sbjct: 320 RNVVAWNAMLGGLAMHGRGKFVLDIFPKMIEEAKPDDLTFMAVLSACSHSGLVDQGYHYF 379
Query: 367 ECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNN 426
+ +G P+IEHY CMVD+ RAG ++EA L++ MPM PN+ VLGSLL C H
Sbjct: 380 RSLESEYGTTPKIEHYACMVDILGRAGHLEEAVMLIKKMPMCPNEVVLGSLLGSCNAHGK 439
Query: 427 AELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSW 486
+L ++ Q+L+ ++D Y L++N+Y + ++RQ + G+RK PG S
Sbjct: 440 LQLGERILQELI-QMDGHNTE-YHVLLSNMYVLEGKQDKANSLRQILKSKGIRKVPGVSS 497
Query: 487 VQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS-ELFLG 535
+ + G +H F AGD ++ IY L + + GY P+ + ++F G
Sbjct: 498 IYVGGNIHQFSAGDKSHPLTKEIYHALNNMIQRLRLAGYVPNTTNQVFPG 547
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 167/474 (35%), Positives = 269/474 (56%), Gaps = 31/474 (6%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H+ ++ G Y+ + Y G + +VFE+ + WN MI G+ R +
Sbjct: 129 KVHAFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPDRDAVSWNIMISGYVRCK 188
Query: 98 TPEKSVYLYKQMIDKETE-PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
E++V +Y++M + E P+E T LS CA G+++H + AS +
Sbjct: 189 RFEEAVDVYRRMWTESNEKPNEATVVSTLSACAVLRNLELGKEIHDYI-ASELDLTTIMG 247
Query: 157 TNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
L+++Y +CG V AR +FD M ++V W S++ GYV G +D A +F+ P
Sbjct: 248 NALLDMYC----KCGHVSVAREIFDAMTVKNVNCWTSMVTGYVICGQLDQARNLFERSPS 303
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
R++V WT MI+G Q + + ++LF EM+ V D+ +V L+ CA+ G L+ GKWI
Sbjct: 304 RDIVLWTAMINGYVQFNRFEETIALFGEMQIRGVKPDKFIVVTLLTGCAQSGALEQGKWI 363
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
H+Y++EN R V + ALI MYA CG IE+++ +F ++ ++T SWTS+I G A
Sbjct: 364 HNYIDEN----RIKVDAVVGTALIEMYAKCGCIEKSFEIFNGLKEKDTTSWTSIICGLAM 419
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
G EAL +TF+ VLSACSH G V+EGR+ F M+ + I+P +E
Sbjct: 420 NGKPSEALELFKAMQTCGLKPDDITFVAVLSACSHAGLVEEGRKLFHSMSSMYHIEPNLE 479
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL---GSLLLGCRIHNNAELASQVAQKL 437
HYGC +DL RAGL+ EA LV+ +P + N+ ++ G+LL CR + N ++ ++A L
Sbjct: 480 HYGCFIDLLGRAGLLQEAEELVKKLPAQNNEIIVPLYGALLSACRTYGNIDMGERLATAL 539
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQING 491
A++ ++ + L+A++YA+A RW+DV VR KM +G++K PG S ++++G
Sbjct: 540 -AKVKSSDSSLH-TLLASIYASADRWEDVRKVRNKMKDLGIKKVPGYSAIEVDG 591
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 179/402 (44%), Gaps = 68/402 (16%)
Query: 25 SLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKTENPS 82
SLL+ + L QI + I G Q L KL+AF + S G A+++F +PS
Sbjct: 13 SLLKSCKSMSQLKQIQAHIFCVGLQQDRDTLNKLMAFSMDSSLGDFNYANRIFNYIHDPS 72
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHG 142
I+N MI+ +S + ++ L++Q+ + PD YTY ++L G REGE+VH
Sbjct: 73 LFIYNLMIKAFVKSGSFRSAISLFQQLREHGVWPDNYTYPYVLKGIGCIGEVREGEKVHA 132
Query: 143 RVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGD 202
V+ +G + ++ + M++Y G G +F++MP R VSWN ++ GYV+
Sbjct: 133 FVVKTGLEFDPYVCNSFMDMYAELGLVEGF---TQVFEEMPDRDAVSWNIMISGYVRCKR 189
Query: 203 IDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSA 262
+ A ++ M WT N K +A +V+ LSA
Sbjct: 190 FEEAVDVYRRM-------WT------ESNEKPNEA-----------------TVVSTLSA 219
Query: 263 CAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRN 322
CA + +L+LGK IH Y+ + + NAL+ MY CG + A +F M +N
Sbjct: 220 CAVLRNLELGKEIHDYIASELD-----LTTIMGNALLDMYCKCGHVSVAREIFDAMTVKN 274
Query: 323 TVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
WTSM+TG+ C G +D+ R FE I +
Sbjct: 275 VNCWTSMVTGYV-----------------IC---GQLDQARNLFE-----RSPSRDIVLW 309
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPM---KPNDAVLGSLLLGC 421
M++ + + +E +L M + KP+ ++ +LL GC
Sbjct: 310 TAMINGYVQFNRFEETIALFGEMQIRGVKPDKFIVVTLLTGC 351
>gi|222619002|gb|EEE55134.1| hypothetical protein OsJ_02921 [Oryza sativa Japonica Group]
Length = 493
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 164/506 (32%), Positives = 274/506 (54%), Gaps = 58/506 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI--WNQMIRGHAR 95
Q H+ + + +++L L+ Y + Y +A V + ++ + WN +I G+ R
Sbjct: 26 QFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWASDVVSWNTIIAGYIR 85
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
P K++ + QM ++ DE T +L CAR G + G H V+ +G+ N +I
Sbjct: 86 GGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNGFEINCYI 145
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
++L+++Y +CG+ ++ A ++F+ MP
Sbjct: 146 GSSLVSMY----AKCGM------------------------------VEEARRVFNRMPE 171
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
RNVV WT+MI+GC Q+G+ ++A+ LF +M+ A V D + +S+C ++G L LG+++
Sbjct: 172 RNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYL 231
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
H+Y + + +G+E +S+ N+LI MY+ CG++ +AY +F + +R+ +WT MI GFA
Sbjct: 232 HAYCDGH-GLGKE---LSVKNSLIDMYSKCGDVNKAYQIFHGLTKRDVFTWTVMIMGFAM 287
Query: 336 QGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
G EAL + FLGVL+ACSHGG V++G F M++ + + PRI
Sbjct: 288 NGLCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGGLVEQGYHHFHRMSKVYNLVPRI 347
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
EHYGCMVDL RA L+ EA +++MP+ P+ V SLL CR LA A++ +
Sbjct: 348 EHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVVWRSLLFACRASGQVGLAEYAAER-IE 406
Query: 440 EIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG 499
+++P++ G++ L++NVYA RW DV VR M K PG S+++++G +H+F AG
Sbjct: 407 QLEPKRCGGHV-LLSNVYATTLRWVDVNNVRTGMGNSRTSKKPGCSFIEVDGCIHEFFAG 465
Query: 500 DSTYKQASLIYKTLGEITMQAMQEGY 525
D ++ + I TL I + E +
Sbjct: 466 DESHFETEAICNTLFGINELLVAESF 491
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 176/549 (32%), Positives = 286/549 (52%), Gaps = 88/549 (16%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPS----TAI-------- 85
QIH+QI+ G + ++ L++ Y +G + +AHKVF+ + + TA+
Sbjct: 99 QIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRG 158
Query: 86 -------------------WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLS 126
WN MI G+A ++++ L+ +M+ + +PDE T + +LS
Sbjct: 159 NMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLS 218
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARS 186
C G G Q+H + G+ SN+ + L++LY
Sbjct: 219 TCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLY----------------------- 255
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
K G+++ A +F+ + +++V+SW T+I G A ++AL +F EM +
Sbjct: 256 -----------SKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLK 304
Query: 247 ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLV--SLNNALIHMYAS 304
+ V +++ L ACA +G + +G+WIH Y+++ + ++ SL +LI MYA
Sbjct: 305 LGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKL----KGIITNTSLQTSLIDMYAK 360
Query: 305 CGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGV 349
CG IE A VF + ++ S +MI GFA G A A +TF+G+
Sbjct: 361 CGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGL 420
Query: 350 LSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKP 409
LSACSH G D GR+ F+ M ++ I+P++EHYGCM+DL R+GL EA L+ +M M+P
Sbjct: 421 LSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEP 480
Query: 410 NDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAV 469
+ + GSLL C+IH N EL +AQKL+ +I+P+ Y+ L++N+YA + RW DVA V
Sbjct: 481 DGVIWGSLLKACKIHKNLELGELIAQKLM-KIEPKNPGSYV-LLSNIYATSARWDDVARV 538
Query: 470 RQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDI 529
R + G++K PG S ++I+ ++H+F+ GD + Q IYK L EI + G+ D
Sbjct: 539 RTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEIYKMLEEIDSLLAETGFVSDT 598
Query: 530 SELFLGIEE 538
SE+ +EE
Sbjct: 599 SEVLQEMEE 607
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 142/422 (33%), Positives = 232/422 (54%), Gaps = 34/422 (8%)
Query: 47 GFSQKNYILAKLLAFYVTSGY---LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSV 103
G NY L+KLL F + + Y L A VF+ + P+ WN MIRGHA S P ++
Sbjct: 4 GLHNTNYALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISAL 63
Query: 104 YLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLY 163
LY MI P+ YT+ FL CA+ +EG+Q+H ++L G ++ + T+L+++Y
Sbjct: 64 NLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMY 123
Query: 164 LMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTT 223
+G V A +FD R VVS+ +++ GY RG++D A K+FDE+P ++VVSW
Sbjct: 124 AQNG---IVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNA 180
Query: 224 MISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENF 283
MISG A+ G+ ++AL LFNEM + V D+ + LS C G+++LG+ IHS++ +N
Sbjct: 181 MISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWI-DNH 239
Query: 284 SVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL 343
G LV NALI +Y+ CGE+E A+G+F +Q ++ +SW ++I G+A + +EAL
Sbjct: 240 GFGSNLKLV---NALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEAL 296
Query: 344 LTF---------------LGVLSACSHGGFVDEGRQFFECMNQNW-GIKPRIEHYGCMVD 387
L F L +L AC+H G +D GR +++ GI ++D
Sbjct: 297 LVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLID 356
Query: 388 LFSRAGLMDEA---FSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE-IDP 443
++++ G ++ A F + N + +A ++ G +H A+ A + ++ + I+P
Sbjct: 357 MYAKCGNIEAANQVFDTILNKSLSSCNA----MIFGFAMHGRADAAFDLLSRMKKDGIEP 412
Query: 444 EQ 445
+
Sbjct: 413 DD 414
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/507 (33%), Positives = 265/507 (52%), Gaps = 58/507 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H I+ G+ ++ + LL FY+ G + NA +VF++ + WN +I G+AR
Sbjct: 126 EVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQG 185
Query: 98 TPEKSVYLYKQMID-KETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
S ++K+M++ KE P+E T L+ C + G +HG
Sbjct: 186 MVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHG-------------- 231
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNS-LLKGYVKRGDIDGAWKIFDEMPH 215
Y+M DM R V + L+ YVK G +DGA K+FDE+P
Sbjct: 232 ------YMMK--------------DMVLREGVKLEAALINLYVKCGYLDGARKLFDEIPE 271
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
+N V W ++I G Q G + + L EM + + D+ + LSACA++G LG W+
Sbjct: 272 KNTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTVSGVLSACAQMGAFNLGNWV 331
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
H + E+ G V + ALI MYA CG I A VF +M RN +W ++++G+A
Sbjct: 332 HRFAEKK---GIWDVFIG--TALIDMYAKCGFIGAARKVFDQMNERNVATWNAILSGYAS 386
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
G A+ A+ +TFL VL AC+H G V+ G+Q+F+ M Q + I PR+E
Sbjct: 387 HGQAESAIELFSEMRESGARPDSITFLAVLHACAHSGLVENGKQYFDLMLQYYKIPPRVE 446
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HYGCMVDL RAGL+ EA L++ M ++PN V G+LL C IH N E+ A ++ +
Sbjct: 447 HYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGALLSACSIHGNIEIGEWAAHHMI-K 505
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
++ Y+ L AN+YA+A+R+ V AVR+ M++ G+ K G S ++I V+H+FV D
Sbjct: 506 LNAMDGGSYVIL-ANLYASAQRFNRVKAVREMMVEKGICKSHGCSMIEIGDVVHEFVVAD 564
Query: 501 STYKQASLIYKTLGEITMQAMQEGYKP 527
+ ++ IY L E++ + GY P
Sbjct: 565 KMHPRSEEIYSVLDELSKKLKMAGYVP 591
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 218/443 (49%), Gaps = 71/443 (16%)
Query: 19 TTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKT 78
T + + +L++ + L QIH++ II+ S +I+ K++ +++ L A +VF +T
Sbjct: 5 TPKSVLALIETCTNIQQLKQIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVFNQT 64
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQM-IDKETEPDEYTYSFLLSVCARCGLFREG 137
+ P I+N MIR ++ S+TP ++ +Y +M + D+YTY F+ CA +G
Sbjct: 65 QEPDGFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKG 124
Query: 138 EQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGY 197
++VHG ++ GY + F++++L+N Y++ G +G A+ +FD+ A+ VV WN+L+ GY
Sbjct: 125 KEVHGVIVRIGYELDGFLQSSLLNFYMVCG---EIGNAQQVFDEFDAKDVVFWNALITGY 181
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
++G + ++ +F EM E++ R ++ ++
Sbjct: 182 ARQGMVLDSFGVFKEMV----------------------------EVKEVRP--NEGTMM 211
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
+ AC E +LKLG+ IH Y+ ++ V RE V L ALI++Y CG ++ A +F +
Sbjct: 212 GLIVACIESKNLKLGRAIHGYMMKDM-VLREG--VKLEAALINLYVKCGYLDGARKLFDE 268
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEG 362
+ +NTV W S+I G+ + G E + T GVLSAC+ G + G
Sbjct: 269 IPEKNTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTVSGVLSACAQMGAFNLG 328
Query: 363 RQFFECMNQNWGIKPRIEHYG--------CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL 414
NW + E G ++D++++ G + A + M + N A
Sbjct: 329 ---------NW-VHRFAEKKGIWDVFIGTALIDMYAKCGFIGAARKVFDQMNER-NVATW 377
Query: 415 GSLLLGCRIHNNAELASQVAQKL 437
++L G H AE A ++ ++
Sbjct: 378 NAILSGYASHGQAESAIELFSEM 400
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 192/563 (34%), Positives = 292/563 (51%), Gaps = 75/563 (13%)
Query: 4 EEIIPANPATSSKALTTRQIFSLLQIRNTTKTLF---QIHSQII-INGFSQKNYILAKLL 59
E I PA P+T R +LL++ + ++ QIH++ + G + +LAK L
Sbjct: 3 EAIAPA-PSTHP---ALRHCVALLRLHLPSPSVAAAKQIHARALRAAGVPLSHPLLAKHL 58
Query: 60 AFYVTS-----GYLINAHKVFE-KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKE 113
F++ S L+ A V +P N ++R A S P ++ L+++ +
Sbjct: 59 LFHLASLRAGPPPLLYAVTVLSCLLPDPDPFSLNTVLRIAASSAHPRIALALHRRRL--- 115
Query: 114 TEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVG 173
PD +TY LL C R REGE +H +G + VF++ +L++ Y G CG+
Sbjct: 116 APPDTHTYPPLLQACTRLLALREGESLHAEAAKNGLVALVFVKNSLVHHY----GACGL- 170
Query: 174 CARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP--HRNVVSWTTMISGCAQN 231
+ A ++FDE+P RN+VSW ++++G A N
Sbjct: 171 -----------------------------FESAHRVFDEIPVLERNLVSWNSVMNGFAAN 201
Query: 232 GKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL 291
G+ + L++F E A + D +V+ L+ACAEIG L LG+ +H + + VG V
Sbjct: 202 GRPNEVLTIFRETLEADLMPDGFTIVSVLTACAEIGALTLGRRVHVFASKVGLVGNSHV- 260
Query: 292 VSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQGYAQEAL------- 343
NALI +YA CG +E+A+ VF +M R VSWTS+I G A G+ ++AL
Sbjct: 261 ---GNALIDLYAKCGGVEDAWKVFEEMGVARTVVSWTSLIVGLAGNGFGKDALELFGLME 317
Query: 344 --------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLM 395
+T +GVL ACSH G VD+G ++F M +GI P IEH GCMVDL RAG +
Sbjct: 318 RERLIPTDITMVGVLYACSHCGLVDDGFRYFNEMQDKYGIAPGIEHLGCMVDLLGRAGRV 377
Query: 396 DEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVAN 455
+EA + + MP++PN V +LL C +H EL +LV E+DP + Y+ L++N
Sbjct: 378 EEAHNYITTMPVEPNAVVWRTLLGACAMHKKLELGEAAWARLV-ELDPGHSGDYV-LLSN 435
Query: 456 VYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGE 515
+YAA RW D +R+ M GVRK PG S V++ +++FV GD ++ ++ IY+TL E
Sbjct: 436 LYAAVGRWADAHVLRKTMATHGVRKNPGHSLVELRNSVYEFVMGDRSHPESDQIYQTLAE 495
Query: 516 ITMQAMQEGYKPDISELFLGIEE 538
I + +GY P S + IEE
Sbjct: 496 IAERLRCQGYVPRTSNVLADIEE 518
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 183/572 (31%), Positives = 279/572 (48%), Gaps = 88/572 (15%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
IH I+ +G ++ L+ Y G ++ A VFE T WN MI GHA+ +
Sbjct: 508 IHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGS 567
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGY--------- 149
E + L+ +M + EPD+ T++ +L C G Q+H ++ SG
Sbjct: 568 YEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNA 627
Query: 150 CSNVFIRT----------------NLMNLYLMSGGECGVGCARLLFDDM---------PA 184
N++IR N+M+ M GG G R F+ P
Sbjct: 628 LINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPV 687
Query: 185 RSVVS---------------------------------WNSLLKGYVKRGDIDGAWKIFD 211
+S S N+L+ Y K G + A K+FD
Sbjct: 688 KSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFD 747
Query: 212 EMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKL 271
+MP+R+++SW MI+G AQNG AL +M+ V L++ + V+ L+AC+ L+
Sbjct: 748 KMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEE 807
Query: 272 GKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMIT 331
GK +H+ + + G V + ALI MYA CG +EEA VF +N V+W +MI
Sbjct: 808 GKRVHAEIVKRKMQGD----VRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMIN 863
Query: 332 GFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIK 376
+A+ G A +AL TF +LSAC+H G V EG + F + G+
Sbjct: 864 AYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLS 923
Query: 377 PRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQK 436
P IEHYGC+V L RAG EA +L+ MP P+ AV +LL CRIH N LA A
Sbjct: 924 PTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANN 983
Query: 437 LVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDF 496
+ +++ A Y+ L++NVYAAA RW DVA +R+ M G+RK PG+SW++++ ++H+F
Sbjct: 984 AL-KLNARNPAVYV-LLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEF 1041
Query: 497 VAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
+A D ++ + + IY+ L ++++ + GY PD
Sbjct: 1042 IAADRSHPETAEIYEELKRLSLEMERAGYSPD 1073
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 190/404 (47%), Gaps = 59/404 (14%)
Query: 24 FSLLQIRNTTKTLFQ---IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTEN 80
S+L +T+K L IHS I G S I L++ Y G L A ++F
Sbjct: 389 LSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPK 448
Query: 81 PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
WN +I G+AR E +++ LYKQM + +P T+ LLS C + +G+ +
Sbjct: 449 RDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMI 508
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKR 200
H +L SG SN + LMN+Y G + A+ +F+ AR ++SWNS++ G+ +
Sbjct: 509 HEDILRSGIKSNGHLANALMNMYRRCG---SIMEAQNVFEGTRARDIISWNSMIAGHAQH 565
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
G + A+K LF EM++ + D++ + L
Sbjct: 566 GSYEAAYK-------------------------------LFLEMKKEGLEPDKITFASVL 594
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
C L+LG+ IH + E+ G + + V+L NALI+MY CG +++AY VF ++
Sbjct: 595 VGCKNPEALELGRQIHMLIIES---GLQ-LDVNLGNALINMYIRCGSLQDAYEVFHSLRH 650
Query: 321 RNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQF 365
RN +SWT+MI GFA QG ++A TF +L AC +DEG++
Sbjct: 651 RNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKV 710
Query: 366 F-ECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
+N + + + + ++ +S++G M +A + MP +
Sbjct: 711 IAHILNSGYELDTGVGN--ALISAYSKSGSMTDARKVFDKMPNR 752
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/496 (22%), Positives = 217/496 (43%), Gaps = 99/496 (19%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH+Q++ G ++ L+ YV + +AH+VF K WN +I +A+
Sbjct: 103 RIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQG 162
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+K+ L+++M P + TY +L+ C G+++H +++ +GY + ++
Sbjct: 163 FKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQN 222
Query: 158 NLMNLYLMSGGEC-GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
+L+N+Y G+C + AR +F + R VVS+N++L Y ++ ++ +F +M
Sbjct: 223 SLLNMY----GKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSE 278
Query: 217 NV------------------------------------------VSWTTMISGCAQNGKS 234
+ + TM C +
Sbjct: 279 GIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGA 338
Query: 235 RQALSLFNE----------------------------MRRARVGLDQVALVAALSACAEI 266
+QAL F + MR V +++ ++ L+AC+
Sbjct: 339 KQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTS 398
Query: 267 GDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSW 326
L G+ IHS++ E VG V + N+LI MYA CG++ A +F M +R+ +SW
Sbjct: 399 KALGAGELIHSHISE---VGHSSD-VQIGNSLISMYARCGDLPRARELFNTMPKRDLISW 454
Query: 327 TSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQ 371
++I G+A++ EA+ +TFL +LSAC++ +G+ E + +
Sbjct: 455 NAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILR 514
Query: 372 NWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAV-LGSLLLGCRIHNNAELA 430
+ GIK +++++ R G + EA ++ + + D + S++ G H + E A
Sbjct: 515 S-GIKSNGHLANALMNMYRRCGSIMEAQNVFEG--TRARDIISWNSMIAGHAQHGSYEAA 571
Query: 431 SQVAQKLVAE-IDPEQ 445
++ ++ E ++P++
Sbjct: 572 YKLFLEMKKEGLEPDK 587
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 138/297 (46%), Gaps = 54/297 (18%)
Query: 112 KETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG 171
+ TE + Y L+ C R E +++H +++ +G ++F+ L+N+Y
Sbjct: 76 RPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMY-------- 127
Query: 172 VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQN 231
VK + A ++F +MP R+V+SW ++IS AQ
Sbjct: 128 --------------------------VKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQ 161
Query: 232 GKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL 291
G ++A LF EM+ A ++ ++ L+AC +L+ GK IHS + E R+P
Sbjct: 162 GFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEA-GYQRDP-- 218
Query: 292 VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------- 343
+ N+L++MY C ++ A VF + RR+ VS+ +M+ +A++ Y +E +
Sbjct: 219 -RVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSS 277
Query: 344 -------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAG 393
+T++ +L A + +DEG++ + + N G+ I + +F R G
Sbjct: 278 EGIPPDKVTYINLLDAFTTPSMLDEGKRIHK-LAVNEGLNSDIRVGTALATMFVRCG 333
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 126/282 (44%), Gaps = 39/282 (13%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++ + I+ +G+ + L++ Y SG + +A KVF+K N WN+MI G+A++
Sbjct: 709 KVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNG 768
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++ QM ++ +++++ +L+ C+ EG++VH ++ +V +
Sbjct: 769 LGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGA 828
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L+++Y +CG + A+ +FD+ ++VV+WN+++ Y
Sbjct: 829 ALISMY----AKCGSLEEAQEVFDNFTEKNVVTWNAMINAY------------------- 865
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
AQ+G + +AL FN M + + D + LSAC G + G I
Sbjct: 866 ------------AQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIF 913
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM 318
S +E G P + L+ + G +EA + +M
Sbjct: 914 SSLESQH--GLSPTIEHY-GCLVGLLGRAGRFQEAETLINQM 952
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 173/486 (35%), Positives = 269/486 (55%), Gaps = 28/486 (5%)
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
YV + L A +VFE A WN MI G+ ++++ L ++M + D+ TY
Sbjct: 233 YVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITY 292
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSN----VFIRTNLMNLYLMSGGECGVGCARL 177
+ ++S CA G F+ G+Q+H +L + N + + L+ LY + V AR
Sbjct: 293 TTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNK---VDEARK 349
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
+F MP R++++WN++L GYV G ++ A F+EMP +N+++ T MISG AQNG +
Sbjct: 350 IFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEG 409
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
L LF +MR A AL+AC+ +G L+ G+ +H+ + +G E L S+ NA
Sbjct: 410 LKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQL---VHLGYESSL-SVGNA 465
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------------- 343
+I MYA CG +E A VF M + VSW SMI + G+ +A+
Sbjct: 466 MISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPD 525
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
+TFL VL+ACSH G V++GR +F M +++GI P +HY MVDLF RAG+ A ++
Sbjct: 526 RITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVI 585
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKR 462
+MP KP V +LL GCRIH N +L + A++L ++ P+ Y+ L++N+YA R
Sbjct: 586 DSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLF-KLMPQNDGTYV-LLSNIYADVGR 643
Query: 463 WQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQ 522
W DVA VR+ M VRK P SW+++ +H F+ D + + +Y+ L ++ ++ +
Sbjct: 644 WNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKK 703
Query: 523 EGYKPD 528
GY PD
Sbjct: 704 LGYIPD 709
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 194/393 (49%), Gaps = 58/393 (14%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPS---------------- 82
+H+ +I +GF + + L +LL Y S ++ A ++FE+ NP
Sbjct: 35 VHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAYCALGN 94
Query: 83 -----------------TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
+ +N MI G+A + ++ L++ M + PD++T++ +L
Sbjct: 95 LELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVL 154
Query: 126 SVCARCGLFREGEQ----VHGRVLASGY-CSNVFIRTNLMNLYLMSGGECGVGC-----A 175
S LF EQ +H V+ +G C + + L+++Y+ E G+ C A
Sbjct: 155 SALV---LFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSA 211
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
R LFD+MP R ++W +++ GYV+ D++GA ++F+ M +W MISG G +
Sbjct: 212 RKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQ 271
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
+AL+L +MR + D + +SACA +G ++GK +H+Y+ +N +S++
Sbjct: 272 EALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVS 331
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEA-----------LL 344
NALI +Y +++EA +F M RN ++W ++++G+ G +EA LL
Sbjct: 332 NALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLL 391
Query: 345 TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
T ++S + GF DEG + F+ M + G +P
Sbjct: 392 TLTVMISGLAQNGFGDEGLKLFKQMRLD-GFEP 423
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 13/188 (6%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H+Q++ G+ + +++ Y G + A VF + WN MI +
Sbjct: 446 QLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHG 505
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLAS---GYCSNVF 154
K++ L+ QM+ + PD T+ +L+ C+ GL +G +L S C + +
Sbjct: 506 HGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHY 565
Query: 155 IRTNLMNLYLMSGGECGVGCARLLFDDMPAR-SVVSWNSLLKGYVKRGDID----GAWKI 209
R +++L+ +G AR++ D MP++ W +LL G G++D A ++
Sbjct: 566 AR--MVDLFCRAG---MFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQL 620
Query: 210 FDEMPHRN 217
F MP +
Sbjct: 621 FKLMPQND 628
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 180/533 (33%), Positives = 279/533 (52%), Gaps = 107/533 (20%)
Query: 89 MIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASG 148
M+R ++ + K V +Y+QM PD + Y L+ G+ H VL G
Sbjct: 1 MLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTGGI-----GFHAHVLKLG 55
Query: 149 YCSNVFIRTNLMNLY---------LMSG-------GEC---------------------- 170
+ S+ F+R ++++Y ++SG G+
Sbjct: 56 HGSDAFVRNAVIDMYARKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGY 115
Query: 171 ----GVGCARLLFDDMPARSVVSWNSLLKGYVKRG------------------------- 201
+ AR FD MP RSVVSWN++L GY + G
Sbjct: 116 AKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMLGAYRNSVTWNAM 175
Query: 202 --------DIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR-VGLD 252
D+D A K+F+ MP RNVV+W +MI+G AQNG+S A+ LF EM A+ + D
Sbjct: 176 ISAYMRVGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPD 235
Query: 253 QVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAY 312
+V +V+ +SAC +G L+LG W+ ++ EN + + +S +NA+I MY+ CG +E+A
Sbjct: 236 EVTMVSVISACGHLGALELGNWVVRFLTEN----QIKLSISGHNAMIFMYSRCGSMEDAK 291
Query: 313 GVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGG 357
VF++M R+ VS+ ++I+GFA G+ EA+ +TF+GVL+ACSH G
Sbjct: 292 RVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAG 351
Query: 358 FVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSL 417
++EGR+ FE + P I+HY CMVDL R G +++A ++ MPM+P+ V GSL
Sbjct: 352 LLEEGRKVFESIKD-----PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSL 406
Query: 418 LLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMG 477
L RIH EL A KL E++P+ + ++ L++N+YA+A RW+DV +R+ M K G
Sbjct: 407 LNASRIHKQVELGELAANKLF-ELEPDNSGNFI-LLSNIYASAGRWKDVERIREAMKKGG 464
Query: 478 VRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
V+K G SWV+ G LH F+ D +++++ IY+ L E+ + + GY D S
Sbjct: 465 VKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKS 517
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 118/262 (45%), Gaps = 43/262 (16%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMID-KETEP 116
+++ Y+ G L +A K+F + WN MI G+A++ ++ L+K+MI K+ P
Sbjct: 175 MISAYMRVGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTP 234
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCAR 176
DE T ++S C G G V R
Sbjct: 235 DEVTMVSVISACGHLGALELGNWV----------------------------------VR 260
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
L ++ S+ N+++ Y + G ++ A ++F EM R+VVS+ T+ISG A +G +
Sbjct: 261 FLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVE 320
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
A++L + M+ + D+V + L+AC+ G L+ G+ + F ++P +
Sbjct: 321 AINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKV-------FESIKDPA-IDHYA 372
Query: 297 ALIHMYASCGEIEEAYGVFRKM 318
++ + GE+E+A +M
Sbjct: 373 CMVDLLGRVGELEDAKRTMERM 394
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 180/500 (36%), Positives = 263/500 (52%), Gaps = 58/500 (11%)
Query: 56 AKLLAFYVTS-GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKET 114
+KLL Y S G L A F + PST WN +IRG +S P + YK MI K
Sbjct: 42 SKLLELYALSLGNLSFAILTFSQIRTPSTNDWNAIIRGFIQSPNPTNAFAWYKSMISKSR 101
Query: 115 EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGC 174
+ D T SF+L CAR E Q+H ++ G+ ++ + T L+++Y
Sbjct: 102 KVDALTCSFVLKACARVLARLESIQIHTHIVRKGFIADALLGTTLLDVY----------- 150
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
K G+ID A K+FDEM R++ SW +ISG AQ K
Sbjct: 151 -----------------------AKVGEIDSAEKVFDEMVKRDIASWNALISGFAQGSKP 187
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
+ALSLF M ++++++ ALSACA++GD K G+ IH Y++ V R + +
Sbjct: 188 TEALSLFKRMEIDGFKPNEISVLGALSACAQLGDFKEGEKIHGYIK----VERFDMNAQV 243
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQGYAQEAL---------- 343
N +I MYA CG +++AY VF M R++ V+W +MI FA G +AL
Sbjct: 244 CNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQSG 303
Query: 344 -----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEA 398
+++L VL AC+HGG V+EG + F M +N G+KP ++HYG +VDL RAG + EA
Sbjct: 304 VSPDDVSYLAVLCACNHGGLVEEGFRLFNSM-ENCGVKPNVKHYGSVVDLLGRAGRLHEA 362
Query: 399 FSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYA 458
+ +V +MP P+ + +LL R H N E+A V++KLV E+ G L++NVYA
Sbjct: 363 YDIVNSMPTVPDIVLWQTLLGASRTHRNVEIAETVSRKLV-EMGSNH-CGDFVLLSNVYA 420
Query: 459 AAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITM 518
A +RW DV VR+ M V+K PG S+++ NGV+H F D +++ IY L EI
Sbjct: 421 ARERWADVGRVREAMKNRDVKKVPGLSYIEGNGVIHKFYNADKSHESWREIYAKLDEIRF 480
Query: 519 QAMQEGYKPDISELFLGIEE 538
+ + GY + S + I E
Sbjct: 481 RVKEYGYVAETSFVLHDIGE 500
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 110/218 (50%), Gaps = 10/218 (4%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH+ I+ GF + LL Y G + +A KVF++ A WN +I G A+
Sbjct: 126 QIHTHIVRKGFIADALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISGFAQGS 185
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
P +++ L+K+M +P+E + LS CA+ G F+EGE++HG + + N +
Sbjct: 186 KPTEALSLFKRMEIDGFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMNAQVCN 245
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPAR-SVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
++++Y +CG V A L+F+ M R +V+WN+++ + G+ A ++F++M
Sbjct: 246 VVIDMY----AKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQ 301
Query: 216 RNV----VSWTTMISGCAQNGKSRQALSLFNEMRRARV 249
V VS+ ++ C G + LFN M V
Sbjct: 302 SGVSPDDVSYLAVLCACNHGGLVEEGFRLFNSMENCGV 339
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 180/532 (33%), Positives = 273/532 (51%), Gaps = 77/532 (14%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH Q + G+ ++ + L+ Y GYL +A K+F++ + W MI G+ ++E
Sbjct: 107 QIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNE 166
Query: 98 TPEKSVYLYKQ-MIDKETEPDEYTYSF----------LLSVCARCGLFREGEQVHGRVLA 146
++V+L+K+ ++ ET+ DE ++S CAR + E VHG +
Sbjct: 167 RAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVK 226
Query: 147 SGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGA 206
G+ G VG N+L+ Y K G+I +
Sbjct: 227 KGF-----------------EGCLAVG-----------------NTLMDAYAKCGEISVS 252
Query: 207 WKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM-RRARVGLDQVALVAALSACAE 265
K+FD M +V SW ++I+ AQNG S +A SLF++M +R V + V L A L ACA
Sbjct: 253 RKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAH 312
Query: 266 IGDLKLGKWIHSYV-----EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
G L++GK IH V E+N VG +++ MY CG +E A F +++R
Sbjct: 313 SGALQIGKCIHDQVVKMELEDNLVVG---------TSIVDMYCKCGRVEMARKAFDRLKR 363
Query: 321 RNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQF 365
+N SWT M+ G+ G+ +EA+ +TF+ VL+ACSH G + EG +
Sbjct: 364 KNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHW 423
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHN 425
F M + ++P IEHY CMVDL RAG + EA+ L+Q M +KP+ V GSLL CRIH
Sbjct: 424 FNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHK 483
Query: 426 NAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQS 485
N EL A+KL ++DP GY L++N+YA A RW DV +R M G+ K PG S
Sbjct: 484 NVELGEISARKLF-KLDPSN-CGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYS 541
Query: 486 WVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIE 537
V+ G +H F+ GD + Q IY+ L E+ ++ + GY P+++ + ++
Sbjct: 542 IVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPNVTSVLYDVD 593
>gi|449436862|ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 174/559 (31%), Positives = 300/559 (53%), Gaps = 64/559 (11%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
+L + +P + + + ++ L++ + + Q+H QI+ G ++ + +LA
Sbjct: 13 LLPSKDLPQSSSELNLKQKEQEYLCLVKKCKSLEEFKQVHVQILKFGLFLDSFCSSSVLA 72
Query: 61 FYVTSGY--LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDE 118
S + + A +F++ + P+T +N MIRG+ + E ++YLY M+ +E EPD
Sbjct: 73 TCALSDWNSMDYACSIFQQLDEPTTFDFNTMIRGYVNNMNFENAIYLYNDMLQREVEPDN 132
Query: 119 YTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGEC---GVGCA 175
+TY +L CAR + +EG Q+HG V G +V+++ +L+N+Y G+C + CA
Sbjct: 133 FTYPVVLKACARLAVIQEGMQIHGHVFKLGLEDDVYVQNSLINMY----GKCRDIEMSCA 188
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
+F M +SV SW++++ H ++ W
Sbjct: 189 --IFRRMEQKSVASWSAIIAA------------------HASLAMWW------------- 215
Query: 236 QALSLFNEMRRARV-GLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
+ L+LF +M R ++ LV LSAC +G LG+ H + +N + + V++
Sbjct: 216 ECLALFEDMSREGCWRAEESILVNVLSACTHLGAFHLGRCAHGSLLKNIT----ELNVAV 271
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------- 343
+L+ MY CG +++ +F+ M R+N +S++ +I+G GY ++AL
Sbjct: 272 MTSLMDMYVKCGSLQKGLCLFQNMTRKNQLSYSVIISGLGLHGYGRQALQIFSEMVEEGL 331
Query: 344 ----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAF 399
+T++ VLSACSH G VDEG F+ M + I+P ++HYGCMVDL RAGL++EAF
Sbjct: 332 EPDDVTYVSVLSACSHSGLVDEGLDLFDKMKFEYRIEPTMQHYGCMVDLKGRAGLLEEAF 391
Query: 400 SLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAA 459
LVQ+MP+K ND + SLL C++H+N +L A+ L + + YL L +N+YA
Sbjct: 392 QLVQSMPIKANDVLWRSLLSACKVHDNLKLGEIAAENLF-RLSSHNPSDYLVL-SNMYAR 449
Query: 460 AKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
A++W++ A +R KMI G+ + PG S V++ ++ FV+ D +Y ++ IYK + ++ Q
Sbjct: 450 AQQWENAAKIRTKMINRGLIQTPGYSLVEVKSKVYKFVSQDKSYCKSGNIYKMIHQMEWQ 509
Query: 520 AMQEGYKPDISELFLGIEE 538
EGY PD S++ L ++E
Sbjct: 510 LRFEGYMPDTSQVMLDVDE 528
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/518 (32%), Positives = 274/518 (52%), Gaps = 59/518 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IHS++ GF+ + L++ Y G + +A VF+K W MI G A+S
Sbjct: 349 EIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSG 408
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ +Y++M EP+ TY+ +L+ C+ G ++H +V+ +G ++ +
Sbjct: 409 FGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGN 468
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+N+Y M G + A ++FD M R+
Sbjct: 469 TLVNMYSMCG----------------------------------SVKDARQVFDRMIQRD 494
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+V++ MI G A + ++AL LF+ ++ + D+V + L+ACA G L+ + IH+
Sbjct: 495 IVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHT 554
Query: 278 YVEEN--FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
V + FS S+ NAL+ YA CG +A VF KM +RN +SW ++I G A+
Sbjct: 555 LVRKGGFFSD------TSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQ 608
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
G Q+AL +TF+ +LSACSH G ++EGR++F M+Q++ I P IE
Sbjct: 609 HGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIE 668
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HYGCMVDL RAG +DEA +L++ MP + N + G+LL CRIH N +A + A+ + +
Sbjct: 669 HYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSL-K 727
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
+D + A Y+AL +++YAAA W A +R+ M + GV K PG+SW+Q+ LH FVA D
Sbjct: 728 LDLDNAVVYVAL-SHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAED 786
Query: 501 STYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++ Q+ IY L +T +GY PD + ++E
Sbjct: 787 RSHPQSEKIYAELDRLTHAMKMKGYVPDTRSVMHDVDE 824
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 196/423 (46%), Gaps = 58/423 (13%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+HS+I+ G + L+ Y G + +VFEK N WN MI G A
Sbjct: 249 VHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGY 308
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
E++ +Y QM + P++ TY LL+ C G+++H RV +G+ S++ ++
Sbjct: 309 WEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNA 368
Query: 159 LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y CG + ARL+FD M + V+SW ++
Sbjct: 369 LISMY----SRCGSIKDARLVFDKMVRKDVISWTAM------------------------ 400
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
I G A++G +AL+++ EM++A V ++V + L+AC+ L+ G+ IH
Sbjct: 401 -------IGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQ 453
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
V E V N L++MY+ CG +++A VF +M +R+ V++ +MI G+A
Sbjct: 454 QVVEAGLATDAHV----GNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHN 509
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+EAL +T++ +L+AC++ G ++ R+ + + G
Sbjct: 510 LGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKG-GFFSDTSVG 568
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE-I 441
+V +++ G +A + + M K N +++ G H + A Q+ +++ E +
Sbjct: 569 NALVSTYAKCGSFSDASIVFEKMT-KRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGV 627
Query: 442 DPE 444
P+
Sbjct: 628 KPD 630
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/523 (24%), Positives = 229/523 (43%), Gaps = 77/523 (14%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH Q + G + +L Y G + A +VF+K E S W I G+A
Sbjct: 147 EIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCG 206
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E + ++++M + P+ TY +L+ + + G+ VH R+L +G+ S+ + T
Sbjct: 207 RSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGT 266
Query: 158 NLMNLYLMSGG--ECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
L+ +Y G +C R +F+ + R +++WN+
Sbjct: 267 ALVKMYAKCGSYKDC-----RQVFEKLVNRDLIAWNT----------------------- 298
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
MI G A+ G +A ++N+M+R V +++ V L+AC L GK I
Sbjct: 299 --------MIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEI 350
Query: 276 HSYV-EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
HS V + F+ + + NALI MY+ CG I++A VF KM R++ +SWT+MI G A
Sbjct: 351 HSRVAKAGFTSD-----IGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLA 405
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
K G+ EAL +T+ +L+ACS ++ GR+ + + + G+
Sbjct: 406 KSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEA-GLATDA 464
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
+V+++S G + +A + M ++ + +++ G HN + A ++ +L
Sbjct: 465 HVGNTLVNMYSMCGSVKDARQVFDRM-IQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQE 523
Query: 440 E-IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVA 498
E + P++ L A + + W + I VRK S + L A
Sbjct: 524 EGLKPDKVTYINMLNACANSGSLEW-------AREIHTLVRKGGFFSDTSVGNALVSTYA 576
Query: 499 GDSTYKQASLIYKTLGE--------ITMQAMQEGYKPDISELF 533
++ AS++++ + + I + Q G D +LF
Sbjct: 577 KCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLF 619
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 132/546 (24%), Positives = 225/546 (41%), Gaps = 115/546 (21%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI--WNQMIRGHAR 95
Q+H II + Y + L+ Y+ G + A +V++K + WN M+ G+ +
Sbjct: 44 QVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQ 103
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
EK++ L +QM PD T LS C G G ++H + + +G
Sbjct: 104 YGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAG------- 156
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
LLFD A N +L Y K G I+ A ++FD+M
Sbjct: 157 ---------------------LLFDVKVA------NCILNMYAKCGSIEEAREVFDKMEK 189
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
++VVSWT I G A G+S A +F +M + V +++ ++ L+A + LK GK +
Sbjct: 190 KSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAV 249
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
HS + + G E ++ AL+ MYA CG ++ VF K+ R+ ++W +MI G A+
Sbjct: 250 HSRI---LNAGHESD-TAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAE 305
Query: 336 QGYAQEA---------------LLTFLGVLSAC--------------------------- 353
GY +EA +T++ +L+AC
Sbjct: 306 GGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGV 365
Query: 354 --------SHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
S G + + R F+ M ++ + + M+ +++G EA ++ Q M
Sbjct: 366 QNALISMYSRCGSIKDARLVFDKM-----VRKDVISWTAMIGGLAKSGFGAEALTVYQEM 420
Query: 406 P---MKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKR 462
++PN S+L C E ++ Q++V E A + N+Y+
Sbjct: 421 QQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVV-EAGLATDAHVGNTLVNMYSMCGS 479
Query: 463 WQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQ 522
+D V +MI+ + V N ++ + A + K+A ++ L E
Sbjct: 480 VKDARQVFDRMIQRDI--------VAYNAMIGGY-AAHNLGKEALKLFDRLQE------- 523
Query: 523 EGYKPD 528
EG KPD
Sbjct: 524 EGLKPD 529
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 160/366 (43%), Gaps = 68/366 (18%)
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLF 179
Y +L C G QVH ++ + + L+N+Y+ +CG + AR ++
Sbjct: 26 YMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYI----QCGSIEEARQVW 81
Query: 180 DDMP--ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
+ R+V SWN+++ GY++ G I+ +A
Sbjct: 82 KKLSYMERTVHSWNAMVVGYIQYGYIE-------------------------------KA 110
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL--VSLN 295
L L +M++ + D+ +++ LS+C G L+ G+ IH F + +L V +
Sbjct: 111 LKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIH------FQAMQAGLLFDVKVA 164
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------ 343
N +++MYA CG IEEA VF KM++++ VSWT I G+A G ++ A
Sbjct: 165 NCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVV 224
Query: 344 ---LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDE--- 397
+T++ VL+A S + G+ + N G + +V ++++ G +
Sbjct: 225 PNRITYISVLNAFSSPAALKWGKAVHSRI-LNAGHESDTAVGTALVKMYAKCGSYKDCRQ 283
Query: 398 AFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVY 457
F + N + + ++G L G +E+ +Q+ ++ V P + + L A V
Sbjct: 284 VFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVM---PNKITYVILLNACVN 340
Query: 458 AAAKRW 463
+AA W
Sbjct: 341 SAALHW 346
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 127/274 (46%), Gaps = 35/274 (12%)
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
L C E+ DL G+ +H ++ ++ +V + + NALI+MY CG IEEA V++K+
Sbjct: 30 LKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTV----NALINMYIQCGSIEEARQVWKKLS 85
Query: 320 --RRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEG 362
R SW +M+ G+ + GY ++AL T + LS+C G ++ G
Sbjct: 86 YMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWG 145
Query: 363 RQF-FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGC 421
R+ F+ M G+ ++ C+++++++ G ++EA + M K V ++ +G
Sbjct: 146 REIHFQAMQA--GLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKS--VVSWTITIGG 201
Query: 422 RIH-NNAELASQVAQKLVAE-IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVR 479
+E A ++ QK+ E + P + L A AA +W AV +++ G
Sbjct: 202 YADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGK--AVHSRILNAG-- 257
Query: 480 KPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTL 513
+S + L A +YK +++ L
Sbjct: 258 ---HESDTAVGTALVKMYAKCGSYKDCRQVFEKL 288
>gi|255582129|ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinus communis]
gi|223528509|gb|EEF30537.1| Cell division protein ftsH, putative [Ricinus communis]
Length = 1157
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 177/519 (34%), Positives = 281/519 (54%), Gaps = 65/519 (12%)
Query: 24 FSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAF--YVTSGYLINAHKVFEKTENP 81
SLL++ ++ K L+QIHSQI ++G +++ +L+ F S L A + + + +P
Sbjct: 668 LSLLKLCSSIKHLYQIHSQIQVSGLQGDTFLVTQLIKFSSLSPSKDLSYAQSILDHSVHP 727
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVH 141
WN +IRG+A S TP+ ++++Y+ M ++ P+ T+ FLL CA C +EG+QVH
Sbjct: 728 VPLPWNILIRGYADSNTPKDALFVYRNMRNEGIRPNSLTFPFLLKACAACFATKEGKQVH 787
Query: 142 GRVLASGYCSNVFIRTNLMNLYLMSGGEC-GVGCARLLFDDMPARSVVSWNSLLKGYVKR 200
V+ G +V++ NL+N Y G C + A +FD+MP R+VVSWN++
Sbjct: 788 VEVIKYGLDCDVYVNNNLVNFY----GSCKKILDACKVFDEMPERTVVSWNAV------- 836
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
I+ C ++ K +A+ F +MR D +V L
Sbjct: 837 ------------------------ITSCVESLKLGEAIRYFLKMRDFGFEPDGTTMVLML 872
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVL-VSLNNALIHMYASCGEIEEAYGVFRKMQ 319
CAE+G+L LG+WIHS V E R VL L AL+ MYA G + A VF +M+
Sbjct: 873 VICAEMGNLGLGRWIHSQVIE-----RGLVLNYQLGTALVDMYAKSGAVGYAKLVFDRMK 927
Query: 320 RRNTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGR 363
+N +W++MI G A+ G+A+E L +TFLGVL ACSH G V +G
Sbjct: 928 EKNVWTWSAMILGLAQHGFAKEGLELFLDMMRSSLIHPNYVTFLGVLCACSHAGLVSDGF 987
Query: 364 QFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRI 423
++F M +GIKP + HYG MVD+ RAGL+ EA++ + MP +P+ V +LL C I
Sbjct: 988 RYFHEMGHTYGIKPMMVHYGAMVDILGRAGLLKEAYNFITKMPFQPDPIVWRTLLSACSI 1047
Query: 424 H---NNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRK 480
H ++ +A +V ++L+ E++P + +G +VAN+YA A W+ A VR+ M G++K
Sbjct: 1048 HDVKDSTGVAYKVRKRLL-ELEPRR-SGNFVMVANMYADAGMWEKAAKVRRVMRDGGLKK 1105
Query: 481 PPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
G+S V+++G +H F +G + +Y+ L + +
Sbjct: 1106 KAGESCVELSGSIHRFFSGYDSQDDKEGMYQLLDGLNLH 1144
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 173/486 (35%), Positives = 269/486 (55%), Gaps = 28/486 (5%)
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
YV + L A +VFE A WN MI G+ ++++ L ++M + D+ TY
Sbjct: 233 YVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITY 292
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSN----VFIRTNLMNLYLMSGGECGVGCARL 177
+ ++S CA G F+ G+QVH +L + N + + L+ LY + V AR
Sbjct: 293 TTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNK---VDEARK 349
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
+F MP R++++WN++L GYV G ++ A F+EMP +N+++ T MISG AQNG +
Sbjct: 350 IFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEG 409
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
L LF +MR A AL+AC+ +G L+ G+ +H+ + +G E L S+ NA
Sbjct: 410 LKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQL---VHLGYESSL-SVGNA 465
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------------- 343
+I MYA CG +E A VF M + VSW SMI + G+ +A+
Sbjct: 466 MISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPD 525
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
+TFL VL+ACSH G V++GR +F M +++GI P +HY MVDLF RAG+ A ++
Sbjct: 526 RITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVI 585
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKR 462
+MP KP V +LL GCRIH N +L + A++L ++ P+ Y+ L++N+YA R
Sbjct: 586 DSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLF-KLMPQNDGTYV-LLSNIYADVGR 643
Query: 463 WQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQ 522
W +VA VR+ M VRK P SW+++ +H F+ D + + +Y+ L ++ ++ +
Sbjct: 644 WNEVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKK 703
Query: 523 EGYKPD 528
GY PD
Sbjct: 704 LGYIPD 709
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 194/393 (49%), Gaps = 58/393 (14%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPS---------------- 82
+H+ +I +GF + + L +LL Y S L+ A ++FE+ NP
Sbjct: 35 VHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAYCALGN 94
Query: 83 -----------------TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
+ +N MI G+A + ++ L++ M + PD++T++ +L
Sbjct: 95 LELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVL 154
Query: 126 SVCARCGLFREGEQ----VHGRVLASGY-CSNVFIRTNLMNLYLMSGGECGVGC-----A 175
S LF EQ +H V+ +G C + + L+++Y+ E G+ C A
Sbjct: 155 SALV---LFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSA 211
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
R LFD+MP R ++W +++ GYV+ D++GA ++F+ M +W MISG G +
Sbjct: 212 RKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQ 271
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
+AL+L +MR + D + +SACA +G ++GK +H+Y+ +N +S++
Sbjct: 272 EALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVS 331
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEA-----------LL 344
NALI +Y +++EA +F M RN ++W ++++G+ G +EA LL
Sbjct: 332 NALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLL 391
Query: 345 TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
T ++S + GF DEG + F+ M + G +P
Sbjct: 392 TLTVMISGLAQNGFGDEGLKLFKQMRLD-GFEP 423
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 13/188 (6%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H+Q++ G+ + +++ Y G + A VF + WN MI +
Sbjct: 446 QLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHG 505
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLAS---GYCSNVF 154
K++ L+ QM+ + PD T+ +L+ C+ GL +G +L S C + +
Sbjct: 506 HGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHY 565
Query: 155 IRTNLMNLYLMSGGECGVGCARLLFDDMPAR-SVVSWNSLLKGYVKRGDID----GAWKI 209
R +++L+ +G AR++ D MP++ W +LL G G++D A ++
Sbjct: 566 AR--MVDLFCRAG---MFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQL 620
Query: 210 FDEMPHRN 217
F MP +
Sbjct: 621 FKLMPQND 628
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 183/551 (33%), Positives = 290/551 (52%), Gaps = 59/551 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++HS ++ +G S + LL Y SG + A VF++ + ST+ WN MI H +S
Sbjct: 166 KVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSG 225
Query: 98 TPEKSVYLYKQMI--------------------------------DKETEPDEYTYSFLL 125
+ + ++QMI D ++PD++T + L
Sbjct: 226 LVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASAL 285
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDD--MP 183
S CA + G+Q+H ++ + + + + L+++Y SGG V A+ + + +
Sbjct: 286 SACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGG---VEIAQKIIEQSMIS 342
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
V+++ +LL GYVK GDI+ A +IFD + R+VV+WT MI G QNG ++ A+ LF
Sbjct: 343 NLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRS 402
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
M + + L LS + + L G+ IH+ + + VS++NALI MYA
Sbjct: 403 MIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASS----VSVSNALITMYA 458
Query: 304 SCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQGYAQEAL---------------LTFL 347
G I +A VF + +R+T++WTSMI A+ G +EAL +T++
Sbjct: 459 KSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYV 518
Query: 348 GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM 407
GVLSAC+H G V++GR ++ M I P HY CM+DLF RAGL+ EA + ++NMP+
Sbjct: 519 GVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPI 578
Query: 408 KPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVA 467
+P+ GSLL C++H N ELA A++L+ I+PE + Y AL ANVY+A +W++ A
Sbjct: 579 EPDVIAWGSLLASCKVHKNVELAEVAAERLLL-IEPENSGAYSAL-ANVYSACGQWENAA 636
Query: 468 AVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
+R+ M GV+K G SWVQI +H F D + Q IY+ + +I + + G+ P
Sbjct: 637 NIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEMMAKIWKEIKKMGFVP 696
Query: 528 DISELFLGIEE 538
D + +EE
Sbjct: 697 DTESVLHDLEE 707
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 169/319 (52%), Gaps = 33/319 (10%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
+L+ Y G L AH+VFE+ P + W MI G+ + E ++ ++++M+ + P
Sbjct: 85 ILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPT 144
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
++T + +L+ CA G +VH V+ G S + + +L+N+Y SG A++
Sbjct: 145 QFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPV---TAKI 201
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
+FD M +S SWN+++ +++ G +D A F++M R+VVSW MISG Q+G R+A
Sbjct: 202 VFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREA 261
Query: 238 LSLFNEM-RRARVGLDQVALVAALSACAEIGDLKLGKWIHSY------------------ 278
L +F++M + D+ L +ALSACA + +LKLGK IH++
Sbjct: 262 LDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALIS 321
Query: 279 -------VEENFSVGREPVLVSLN----NALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
VE + + ++ +L+ AL+ Y G+I A +F ++ R+ V+WT
Sbjct: 322 MYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWT 381
Query: 328 SMITGFAKQGYAQEALLTF 346
+MI G+ + G+ Q+A+ F
Sbjct: 382 AMIVGYVQNGFNQDAMELF 400
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 166/343 (48%), Gaps = 44/343 (12%)
Query: 114 TEPDEYTYSFLLSVCARCGLFRE---GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGEC 170
T P + SFL R F++ G+ +H R++ +G VF+ NLMN Y +G
Sbjct: 10 TSPSDPYTSFL----QRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGF-- 63
Query: 171 GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQ 230
+ A +FD+MP +SV SWN +L GY K G ++ A ++F+EMP + VSWT MI G Q
Sbjct: 64 -IYDAHRVFDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQ 122
Query: 231 NGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPV 290
G+ A+ +F EM V Q L L++CA + L +G+ +HS+V ++ G
Sbjct: 123 MGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKH---GLSS- 178
Query: 291 LVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVL 350
+S+ N+L++MYA G+ A VF +M+ ++T SW +MI
Sbjct: 179 YISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMI-------------------- 218
Query: 351 SACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM--- 407
S+ G VD + FE M I+ + + M+ +++ G EA + M M
Sbjct: 219 SSHMQSGLVDLAQVQFEQM-----IERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSS 273
Query: 408 -KPNDAVLGSLLLGCRIHNNAELASQVAQKLV-AEIDPEQAAG 448
KP+ L S L C N +L Q+ ++ E D A G
Sbjct: 274 SKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVG 316
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 175/514 (34%), Positives = 281/514 (54%), Gaps = 76/514 (14%)
Query: 41 SQIIINGFSQKNYIL-AKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
+Q + + ++N I ++ Y L A + F+ S WN M+ G+A++
Sbjct: 182 AQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLA 241
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCG-------LFREGEQVHGRVLASGYCSN 152
E+++ L+ +M++ EPDE T+ ++S C+ G L R Q ++ N
Sbjct: 242 EEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQL-------N 294
Query: 153 VFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDE 212
F+RT L+++Y K GD+D A K+F+
Sbjct: 295 CFVRTALLDMY----------------------------------AKFGDLDSARKLFNT 320
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR-VGLDQVALVAALSACAEIGDLKL 271
MP RNVV+W +MI+G AQNG+S A+ LF EM A+ + D+V +V+ +SAC +G L+L
Sbjct: 321 MPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALEL 380
Query: 272 GKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMIT 331
G W+ ++ EN + + +S +NA+I MY+ CG +E+A VF++M R+ VS+ ++I+
Sbjct: 381 GNWVVRFLTEN----QIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLIS 436
Query: 332 GFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIK 376
GFA G+ EA+ +TF+GVL+ACSH G ++EGR+ FE +
Sbjct: 437 GFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD----- 491
Query: 377 PRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQK 436
P I+HY CMVDL R G +++A ++ MPM+P+ V GSLL RIH EL A K
Sbjct: 492 PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANK 551
Query: 437 LVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDF 496
L E++P+ + ++ L++N+YA+A RW+DV +R+ M K GV+K G SWV+ G LH F
Sbjct: 552 LF-ELEPDNSGNFI-LLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKF 609
Query: 497 VAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
+ D +++++ IY+ L E+ + + GY D S
Sbjct: 610 IVADRSHERSDDIYQLLIELRKKMREAGYIADKS 643
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 126/423 (29%), Positives = 199/423 (47%), Gaps = 63/423 (14%)
Query: 36 LFQIHSQIIINGFSQKNYILAKLL----AFYVTSGYLINAHKVFEKTENPSTAIWNQMIR 91
L Q+H+QII N NY +A L+ Y H +F T NP+ ++ M+R
Sbjct: 17 LRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHY---THLLFNSTLNPNVFVFTSMLR 73
Query: 92 GHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCS 151
++ + K V +Y+QM PD + Y L+ G+ H VL G+ S
Sbjct: 74 FYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTGGI-----GFHAHVLKLGHGS 128
Query: 152 NVFIRTNLMNLYLMSG--GEC----------------------------GVGCARLLFDD 181
+ F+R ++++Y G G G A+ LFD
Sbjct: 129 DAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDV 188
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
MP R+V++W +++ GY K D++ A + FD MP R+VVSW M+SG AQNG + +AL LF
Sbjct: 189 MPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLF 248
Query: 242 NEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHM 301
+EM A + D+ V +SAC+ GD L + + + R + + AL+ M
Sbjct: 249 DEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQK----RIQLNCFVRTALLDM 304
Query: 302 YASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------------LT 345
YA G+++ A +F M RN V+W SMI G+A+ G + A+ +T
Sbjct: 305 YAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVT 364
Query: 346 FLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
+ V+SAC H G ++ G + +N IK I + M+ ++SR G M++A + Q M
Sbjct: 365 MVSVISACGHLGALELGNWVVRFLTEN-QIKLSISGHNAMIFMYSRCGSMEDAKRVFQEM 423
Query: 406 PMK 408
+
Sbjct: 424 ATR 426
>gi|296086445|emb|CBI32034.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 186/551 (33%), Positives = 283/551 (51%), Gaps = 82/551 (14%)
Query: 7 IPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQ--KNYILAKLLAFYVT 64
+P + S R++ L L Q+H+Q I S + L + + +
Sbjct: 13 LPHAISNSDSFTHHRRLLLFLNSCTCISQLKQLHAQTIRTTSSHHPNTFFLYSRILHFSS 72
Query: 65 SGYLINAHKVFEKTENPSTAIWNQMIRGHARS-ETPEKSVYLYKQMIDK-ETEPDEYTYS 122
L A +VF + ENP++ +WN +IR ARS + + ++ LY +M+++ D++T+
Sbjct: 73 LHDLRYAFRVFHQIENPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFP 132
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL----- 177
F+L CA EGEQ+H ++L G+ S+V+I +L++ Y C RL
Sbjct: 133 FVLKACAYLFALSEGEQIHAQILKLGFDSDVYINNSLVHFY--------ATCDRLDFAKG 184
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
+FD M RS+VSWN ++ +V+ G+ D A +F EM +G + Q+
Sbjct: 185 VFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGEMQ-----------KFFEPDGYTIQS 233
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
++ +ACA +G L LG V + V LN +
Sbjct: 234 IA---------------------NACAGMGSLSLG-----IVND----------VLLNTS 257
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------------- 343
L+ MY CG +E A +F +M +R+ SW SMI GF+ G AL
Sbjct: 258 LVDMYCKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCMVRTEKLMP 317
Query: 344 --LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
+TF+GVLSAC+HGG V EGR++F+ M + IKP +EHYGC+VDL +RAGL+DEA +
Sbjct: 318 NAITFVGVLSACNHGGLVSEGRRYFDVMVTEYKIKPELEHYGCLVDLLARAGLIDEALDV 377
Query: 402 VQNMPMKPNDAVLGSLLLGCRIHN-NAELASQVAQKLVAEIDPEQAAGYLALVANVYAAA 460
V NMPM+P+ + SLL C N EL+ ++A++ V E + +G L++ VYA+A
Sbjct: 378 VSNMPMRPDLVIWRSLLDACCKQNAGVELSEEMARR-VLEAEGGVCSGVYVLLSRVYASA 436
Query: 461 KRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQA 520
RW DV VR+ M GV K PG S ++I+GV H+F AGD+++ Q IY L I +
Sbjct: 437 SRWNDVGMVRKLMTDKGVVKEPGCSSIEIDGVAHEFFAGDTSHPQTEEIYSALDVIEERV 496
Query: 521 MQEGYKPDISE 531
+ GY PD S+
Sbjct: 497 ERVGYSPDSSQ 507
>gi|296087773|emb|CBI35029.3| unnamed protein product [Vitis vinifera]
Length = 1596
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/521 (33%), Positives = 280/521 (53%), Gaps = 59/521 (11%)
Query: 21 RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV--TSGYLINAHKVFEKT 78
++ SL Q + + IH+ I+NG NY ++KL++F SG L A +F +
Sbjct: 5 KRCISLAQSCSNMRQFKAIHALFIVNGLHLNNYAISKLISFCALSNSGSLSYASLIFSQI 64
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKET-EPDEYTYSFLLSVCARCGLFREG 137
+NP+ +N +IR ++RS TP+ +++ ++ M+D E PD++T+ F++S C G
Sbjct: 65 QNPNLFAYNTLIRAYSRSSTPQLALHYFQLMLDDENVGPDQHTFPFIISACTNSLWMLLG 124
Query: 138 EQVHGRVLASGYCS-NVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKG 196
+Q+H VL +G S + ++T L+ Y C +G AR
Sbjct: 125 KQIHNWVLKNGVASSDRHVQTALVRFYAEC---CAMGDAR-------------------- 161
Query: 197 YVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVAL 256
K+FDE+P+ +VV W +++G + G + +AL+ F M + V D+ L
Sbjct: 162 -----------KLFDEIPNLDVVQWNVLLNGYVRRGLAPEALNAFRNMLVSGVEPDEFCL 210
Query: 257 VAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFR 316
AL CA++G L+ GKWIH YV + + + V + AL+ MYA CG I+ + VF
Sbjct: 211 TTALKGCAQLGALQQGKWIHEYVTKRKWLEAD---VFIGTALVDMYAKCGCIDRSVEVFE 267
Query: 317 KMQRRNTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFVD 360
M +RN SW++MI GFA G+ ++A+ + LGV+ AC+H G +
Sbjct: 268 GMTKRNVFSWSAMIGGFALHGHVRKAMQCLERMQVEDGLRPDGVVLLGVIMACAHAGLQE 327
Query: 361 EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
EG+ E M +GI P+ EHY CMVDL RAG +DEA L++ MPMKP AV G+LL G
Sbjct: 328 EGQFLLENMEARYGILPKHEHYSCMVDLLCRAGQLDEALKLIRRMPMKPRAAVWGALLSG 387
Query: 421 CRIHNNAELASQVAQKL--VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
CR HNN +LA A++L V D + G ++N+Y AA++ +D +R+ + +
Sbjct: 388 CRTHNNVDLAELAARELLMVGNGDGTEEDGAYVQLSNIYLAAQKCEDACRIRRMIGDKRI 447
Query: 479 RKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
+ PG S +++ G ++ FV+GD ++ + I++ L +++Q
Sbjct: 448 KTKPGCSLIEVEGEVNQFVSGDISHPCLAQIHEMLDLVSLQ 488
>gi|225452668|ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g28640-like [Vitis vinifera]
Length = 511
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 175/521 (33%), Positives = 282/521 (54%), Gaps = 59/521 (11%)
Query: 21 RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV--TSGYLINAHKVFEKT 78
++ SL Q + + IH+ I+NG NY ++KL++F SG L A +F +
Sbjct: 5 KRCISLAQSCSNMRQFKAIHALFIVNGLHLNNYAISKLISFCALSNSGSLSYASLIFSQI 64
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKE-TEPDEYTYSFLLSVCARCGLFREG 137
+NP+ +N +IR ++RS TP+ +++ ++ M+D E PD++T+ F++S C G
Sbjct: 65 QNPNLFAYNTLIRAYSRSSTPQLALHYFQLMLDDENVGPDQHTFPFIISACTNSLWMLLG 124
Query: 138 EQVHGRVLASGYCS-NVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKG 196
+Q+H VL +G S + ++T L+ Y EC CA
Sbjct: 125 KQIHNWVLKNGVASSDRHVQTALVRFY----AEC---CAM-------------------- 157
Query: 197 YVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVAL 256
GD A K+FDE+P+ +VV W +++G + G + +AL+ F M + V D+ L
Sbjct: 158 ----GD---ARKLFDEIPNLDVVQWNVLLNGYVRRGLAPEALNAFRNMLVSGVEPDEFCL 210
Query: 257 VAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFR 316
AL CA++G L+ GKWIH YV + + + V + AL+ MYA CG I+ + VF
Sbjct: 211 TTALKGCAQLGALQQGKWIHEYVTKRKWLEAD---VFIGTALVDMYAKCGCIDRSVEVFE 267
Query: 317 KMQRRNTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFVD 360
M +RN SW++MI GFA G+ ++A+ + LGV+ AC+H G +
Sbjct: 268 GMTKRNVFSWSAMIGGFALHGHVRKAMQCLERMQVEDGLRPDGVVLLGVIMACAHAGLQE 327
Query: 361 EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
EG+ E M +GI P+ EHY CMVDL RAG +DEA L++ MPMKP AV G+LL G
Sbjct: 328 EGQFLLENMEARYGILPKHEHYSCMVDLLCRAGQLDEALKLIRRMPMKPRAAVWGALLSG 387
Query: 421 CRIHNNAELASQVAQKL--VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
CR HNN +LA A++L V D + G ++N+Y AA++ +D +R+ + +
Sbjct: 388 CRTHNNVDLAELAARELLMVGNGDGTEEDGAYVQLSNIYLAAQKCEDACRIRRMIGDKRI 447
Query: 479 RKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
+ PG S +++ G ++ FV+GD ++ + I++ L +++Q
Sbjct: 448 KTKPGCSLIEVEGEVNQFVSGDISHPCLAQIHEMLDLVSLQ 488
>gi|356561772|ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Glycine max]
Length = 522
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 173/515 (33%), Positives = 276/515 (53%), Gaps = 33/515 (6%)
Query: 20 TRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAF-YVTSGYLINAHKVFEKT 78
+ L N L Q+ + + G + ++ KL+ F +T L A +F+
Sbjct: 6 NEHVLDTLSKSNHLNHLKQLQAYLTTLGHAHTHFYAFKLIRFCTLTLSNLTYARLIFDHI 65
Query: 79 ENPSTAIWNQMIRGHA-RSETPEKSVYLYKQMI-DKETEPDEYTYSFLLSVCAR-CGLFR 135
+ +T ++ MI +A T ++ L++ M+ + P+ + + L C C
Sbjct: 66 PSLNTHLFTAMITAYAAHPATHPSALSLFRHMLRSQPPRPNHFIFPHALKTCPESCA--- 122
Query: 136 EGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLK 195
E +H +++ SG+ ++T L++ Y G G+G A+ +FD+M RSVVS+ +++
Sbjct: 123 -AESLHAQIVKSGFHEYPVVQTALVDSYSKVSG--GLGNAKKVFDEMSDRSVVSFTAMVS 179
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVA 255
G+ + GD++ A ++F EM R+V SW +I+GC QNG Q + LF M + V
Sbjct: 180 GFARVGDVESAVRVFGEMLDRDVPSWNALIAGCTQNGAFTQGIELFRRMVFECNRPNGVT 239
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
+V ALSAC +G L+LG+WIH YV +N VL NAL+ MY CG + +A VF
Sbjct: 240 VVCALSACGHMGMLQLGRWIHGYVYKNGLAFDSFVL----NALVDMYGKCGSLGKARKVF 295
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEAL-----------------LTFLGVLSACSHGGF 358
+ SW SMI FA G + A+ +TF+G+L+AC+HGG
Sbjct: 296 EMNPEKGLTSWNSMINCFALHGQSDSAIAIFEQMVEGGGGVRPDEVTFVGLLNACTHGGL 355
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLL 418
V++G +FE M Q +GI+P+IEHYGC++DL RAG DEA +V+ M M+P++ V GSLL
Sbjct: 356 VEKGYWYFEMMVQEYGIEPQIEHYGCLIDLLGRAGRFDEAMDVVKGMSMEPDEVVWGSLL 415
Query: 419 LGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
GC++H +LA A+KL+ EIDP GY ++ANVY +W +V V + + +
Sbjct: 416 NGCKVHGRTDLAEFAAKKLI-EIDPHN-GGYRIMLANVYGELGKWDEVRNVWRTLKQQKS 473
Query: 479 RKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTL 513
K PG SW++++ +H F + D + + +Y L
Sbjct: 474 YKVPGCSWIEVDDQVHQFYSLDKSNPKTEDLYIVL 508
>gi|7362769|emb|CAB83139.1| putative protein [Arabidopsis thaliana]
Length = 558
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 167/480 (34%), Positives = 272/480 (56%), Gaps = 47/480 (9%)
Query: 85 IWNQMIRGHARS-ETPEK--SVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVH 141
+WN +IR + +P++ + +Y +M + PD +T+ FLL G++ H
Sbjct: 26 LWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTH 85
Query: 142 GRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKR 200
++L G + F+RT+L+N+Y CG + A+ +FDD ++ + +WNS++ Y K
Sbjct: 86 AQILLFGLDKDPFVRTSLLNMY----SSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKA 141
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR-----RARVGLDQVA 255
G ID A K+FDEMP RNV+SW+ +I+G GK ++AL LF EM+ A V ++
Sbjct: 142 GLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFT 201
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
+ LSAC +G L+ GKW+H+Y+++ + V + + L ALI MYA CG +E A VF
Sbjct: 202 MSTVLSACGRLGALEQGKWVHAYIDK-YHV---EIDIVLGTALIDMYAKCGSLERAKRVF 257
Query: 316 RKM-QRRNTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGF 358
+ +++ ++++MI A G E +TF+G+L AC H G
Sbjct: 258 NALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGL 317
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLL 418
++EG+ +F+ M + +GI P I+HYGCMVDL+ R+GL+ EA S + +MPM+P+ + GSLL
Sbjct: 318 INEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLL 377
Query: 419 LGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
G R+ + + ++L+ E+DP + Y+ L++NVYA RW + G+
Sbjct: 378 SGSRMLGDIKTCEGALKRLI-ELDPMNSGAYV-LLSNVYAKTGRWME-----------GI 424
Query: 479 RKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
K PG S+V++ GV+H+FV GD + +++ IY L EI + + GY D E+ L + E
Sbjct: 425 NKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNE 484
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 135/334 (40%), Gaps = 76/334 (22%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS- 96
+ H+QI++ G + ++ LL Y + G L +A +VF+ + + WN ++ +A++
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 97 ----------ETPEKSV---------YL----YKQMIDKETE------------PDEYTY 121
E PE++V Y+ YK+ +D E P+E+T
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDD 181
S +LS C R G +G+ VH Y + +
Sbjct: 203 STVLSACGRLGALEQGKWVH------AYIDKYHVEID----------------------- 233
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM-PHRNVVSWTTMISGCAQNGKSRQALSL 240
+V +L+ Y K G ++ A ++F+ + ++V +++ MI A G + + L
Sbjct: 234 -----IVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQL 288
Query: 241 FNEMRRA-RVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
F+EM + + + V V L AC G + GK + E F + + ++
Sbjct: 289 FSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPS---IQHYGCMV 345
Query: 300 HMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITG 332
+Y G I+EA M + + W S+++G
Sbjct: 346 DLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 164/448 (36%), Positives = 254/448 (56%), Gaps = 52/448 (11%)
Query: 137 GEQVHGRVLASGYCS-NVFIRTNLMNLYL-MSGGECG----------------------- 171
G +H R L SG+ + ++F+RT L+ +Y + GE
Sbjct: 66 GASLHARALRSGFAAADLFVRTALVEMYAKTAAGEIALARAAFDEAPRRDVFLCNVMLAA 125
Query: 172 ------VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMI 225
V AR +FD M R +VSWN+++ GY RGD+ A +IFD R+ SW++MI
Sbjct: 126 YVARGEVAEARKVFDGMSGRDLVSWNTMIHGYAVRGDVGMAREIFDGTRDRDAFSWSSMI 185
Query: 226 SGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSV 285
S A+ S++AL L+ EMR A V D +++V+ LSAC+ +G L +G +H +VE N
Sbjct: 186 SAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHRFVESN--- 242
Query: 286 GREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-- 343
R V + L AL+ MYA CG+IE + VF M ++ ++W+SMI G A G +AL
Sbjct: 243 -RVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGHDALSL 301
Query: 344 -------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFS 390
+TF+GVL AC+H G V++G+++F M+ G+ PR+EHYGCMVDL
Sbjct: 302 FSEMISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLG 361
Query: 391 RAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYL 450
RAG ++EA L+++M KP+ + +LL CRIH N E+A + KL +DP A G+
Sbjct: 362 RAGHVEEAMELIRSMTFKPDPIIWRTLLGACRIHKNVEIAEEAMAKLKV-LDP-LADGHY 419
Query: 451 ALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIY 510
L++N+YA A W+ VA +R+ + + +++ PG+S ++ +H+FV+GD ++ + IY
Sbjct: 420 VLLSNIYAQANSWEGVAEMRKTIRRENIQRVPGRSSIEWENTVHEFVSGDRSHPRIEEIY 479
Query: 511 KTLGEITMQAMQEGYKPDISELFLGIEE 538
K L E+ + Q GY+P S + I+E
Sbjct: 480 KMLEEMMDRLRQAGYRPMTSLVLQDIDE 507
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 137/306 (44%), Gaps = 11/306 (3%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
+LA YV G + A KVF+ WN MI G+A V + +++ D + D
Sbjct: 122 MLAAYVARGEVAEARKVFDGMSGRDLVSWNTMIHGYA----VRGDVGMAREIFDGTRDRD 177
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMN-LYLMSGGECGVGCAR 176
+++S ++S A+ +E ++ + +G + ++++ M G R
Sbjct: 178 AFSWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHR 237
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
+ + + +L+ Y K GDI+ + K+F MP ++V++W++MI G A +G
Sbjct: 238 FVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGHD 297
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
ALSLF+EM + +++ + L AC +G + GK S + + V +
Sbjct: 298 ALSLFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPR---MEHYG 354
Query: 297 ALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITG--FAKQGYAQEALLTFLGVLSAC 353
++ + G +EEA + R M + + + W +++ K E + L VL
Sbjct: 355 CMVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGACRIHKNVEIAEEAMAKLKVLDPL 414
Query: 354 SHGGFV 359
+ G +V
Sbjct: 415 ADGHYV 420
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 168/490 (34%), Positives = 273/490 (55%), Gaps = 27/490 (5%)
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
G L +A + + + W +I G++R+ ++V + M+ EPDE T LL
Sbjct: 185 GLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLL 244
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDM-P 183
S CA+ G +H V G + + L+++Y +CG +G A +FD +
Sbjct: 245 SACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMY----AKCGDIGRAWEVFDALGR 300
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
R SWN+++ GY K G +D A +FD+M R++V++ ++I+G G+ R+AL LF +
Sbjct: 301 GRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQ 360
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
MRR + D +V+ L+ACA +G L G+ +H+ +E+ V + L AL+ MY
Sbjct: 361 MRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLV----EVDIYLGTALLDMYL 416
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLG 348
CG +EEA VF+ M R+ +W++MI G A G + AL +T++
Sbjct: 417 KCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIA 476
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
+L+ACSH +DEGR +FE M I+P IEHYGCM+DL R+GL+DEA LV+ MPM+
Sbjct: 477 ILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQ 536
Query: 409 PNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAA 468
PN + S+L CR+H +A LA A+ L+ +++P++ A Y+ L N+Y +++W+D +
Sbjct: 537 PNAVIWASILSACRVHKDANLARNAAEHLL-KLEPDEDAVYVQLY-NIYIDSRQWEDASQ 594
Query: 469 VRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
+R+ M + GV+K G S + + G +H F+ D T+ Q I + EIT + GY P
Sbjct: 595 IRRLMEERGVKKAAGYSSITVAGQVHKFIVCDRTHPQIMEITAMMEEITRRLKSVGYSPI 654
Query: 529 ISELFLGIEE 538
S++ + ++E
Sbjct: 655 TSQITVDVDE 664
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 183/377 (48%), Gaps = 58/377 (15%)
Query: 82 STAIWNQMIRGHARSET-PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARC-GLFREGEQ 139
ST +++ +R R+ + PE + LY++M D +T+ FL CAR +
Sbjct: 66 STFLFDTALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLCQM 125
Query: 140 VHGRVLASGYCSNVFIRTN-LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYV 198
+H + S V + +N ++++Y+ G G AR FDD+P + V+W +++ G
Sbjct: 126 LHAACFRTMLPSAVPLVSNPIIHMYVELGL---AGDARRAFDDIPVKDAVAWTTVISGLA 182
Query: 199 KRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVA 258
K G +D AW + P RNV+SWT +ISG ++ G++ +A+ FN M + D+V ++
Sbjct: 183 KLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIG 242
Query: 259 ALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGV---- 314
LSACA++ DL G+ +H V E + ++V ALI MYA CG+I A+ V
Sbjct: 243 LLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVV----ALIDMYAKCGDIGRAWEVFDAL 298
Query: 315 ----------------------------FRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
F +M+ R+ V++ S+ITG+ G +EALL F
Sbjct: 299 GRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLF 358
Query: 347 L---------------GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSR 391
+ +L+AC+ G + +GR C+ Q ++ I ++D++ +
Sbjct: 359 MQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRL-VEVDIYLGTALLDMYLK 417
Query: 392 AGLMDEAFSLVQNMPMK 408
G ++EA + Q M ++
Sbjct: 418 CGRVEEASLVFQAMSVR 434
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 16/181 (8%)
Query: 209 IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAE-IG 267
+FD MP + T + + + L L+ MRR V D CA
Sbjct: 59 LFDRMPCSTFLFDTALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRA 118
Query: 268 DLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
+ L + +H+ P+ ++N +IHMY G +A F + ++ V+WT
Sbjct: 119 HVLLCQMLHAACFRTMLPSAVPL---VSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWT 175
Query: 328 SMITGFAKQGYAQEA-----------LLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIK 376
++I+G AK G +A ++++ G++S S G E F M + GI+
Sbjct: 176 TVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSD-GIE 234
Query: 377 P 377
P
Sbjct: 235 P 235
>gi|224056897|ref|XP_002299078.1| predicted protein [Populus trichocarpa]
gi|222846336|gb|EEE83883.1| predicted protein [Populus trichocarpa]
Length = 488
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 163/506 (32%), Positives = 280/506 (55%), Gaps = 48/506 (9%)
Query: 19 TTRQIFSLLQIR--NTTKTLFQIHSQIIINGFSQKNYILAK-LLAFYVTSGYLINAHKVF 75
+TR +++ +R + + + Q+H+Q +++G + + A+ LL YVT + A +F
Sbjct: 10 STRAPATIISLRTCHDFQEVKQLHAQFVVSGLLGYHPLCARRLLEAYVTMSQIYYAFSIF 69
Query: 76 EKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFR 135
E+ +P ++N MIRG D +TY+F+L C+
Sbjct: 70 ERIPSPDVFVYNTMIRG---------------------LTMDNFTYTFVLKACSHLKAPF 108
Query: 136 EGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLK 195
EG+QVH +++ +G + I ++L+++Y SG + A + + + ++ N+++
Sbjct: 109 EGKQVHCQIIKAGIVPDTHIHSSLIHMYTNSGS---IDDAERVLGEFSEENTLAKNAMIS 165
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVA 255
GY+ G +D A K+FD+M ++ SW+ +I+G +NG +AL+LF +M + + ++ A
Sbjct: 166 GYLTEGRVDKARKMFDDMAAKDAASWSALITGYTKNGMHTEALALFQDMMVSHILPNEAA 225
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
LV+ LSAC ++G L G+WIH+Y+++ R + L ALI MYA G IE YG+F
Sbjct: 226 LVSLLSACGQLGTLHQGRWIHAYIDKT----RVLMSTKLTTALIDMYAKSGSIECGYGLF 281
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVD 360
+KM RR+ V+W MI+ FA G+A + + F+ +LSACSH G V+
Sbjct: 282 QKMARRDVVTWGVMISAFAIHGHASKCFQLFDEMLADGIRPNKVIFVAILSACSHAGCVE 341
Query: 361 EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
EGRQ+F M +GIKP IEHYGCMVDL RAGL+ +A L+ +MP +PN + GSLL
Sbjct: 342 EGRQYFSQMEHGFGIKPSIEHYGCMVDLLGRAGLLADAEQLILSMPKQPNSIIWGSLLGA 401
Query: 421 CRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRK 480
CR HN+ + + + L+ E++P + L ++A A ++ A +R+ + + +
Sbjct: 402 CRTHNDLKRGTWAFENLM-ELEPTSGDRH-KLAGLMFANAGEKEEAAKIRKMIHEKEMVT 459
Query: 481 PPGQSWVQINGVLHDFVAGDSTYKQA 506
G S++++ G +H+F G + + +A
Sbjct: 460 TCGSSFIEVEGAVHEFTVGYTVHNKA 485
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 166/485 (34%), Positives = 272/485 (56%), Gaps = 56/485 (11%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
QIH+ I G S ++ L+ FY SG++ KVF++ + W +I+ +++
Sbjct: 158 LQIHAHSIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKM 217
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
P +++ + +M D T +LS C++ G F G+ ++LA ++
Sbjct: 218 GYPSEAIAAFFRM---NCTADRMTLVVVLSACSQLGDFTLGK----KILA-------YMD 263
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
+L +++ V N+LL Y+K G A ++F MP +
Sbjct: 264 HHLFDVH---------------------SDVFLGNALLDMYLKCGQPHLARQLFHLMPVK 302
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
N+VSW +MISG A G ++AL +F M+ + D V LV L++CA +GDL+LGKW+H
Sbjct: 303 NLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVH 362
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
SY+++N V NAL+ MYA CG I++A+ VF+ M+ ++ S+T+MI GFA
Sbjct: 363 SYIDKNHMKADGYV----ANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMH 418
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G A AL +T +GVLSACSH G ++EGR+ F+ M++ + ++P+ EH
Sbjct: 419 GKADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYHLQPQTEH 478
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YGCMVDL RAGL+ EA + MP+ P+ +V GSLL C+IH EL V QKL+ E+
Sbjct: 479 YGCMVDLLGRAGLISEAEAFTNKMPIVPDASVWGSLLGACKIHAKVELGETVIQKLI-EM 537
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+PE+ Y+ L++N+Y++A RW+D R+ M + ++K PG S ++++G++H+F G+
Sbjct: 538 EPERDGAYI-LMSNIYSSANRWRDALKWRKAMKQNNIKKTPGCSSIEVDGMVHEFRKGEK 596
Query: 502 TYKQA 506
++ ++
Sbjct: 597 SHPKS 601
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 179/369 (48%), Gaps = 60/369 (16%)
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVY-LYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+NP I+N +I+ + S ++ LY+QM+ PD YT +LL C++ F E
Sbjct: 99 QNP-VYIFNAIIQSLSTSNNTFTHIFSLYRQMLLIGLSPDTYTLPYLLKACSQSHAFIEA 157
Query: 138 EQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGY 197
Q+H + +G SN+F++ LM Y +SG + +FD P ++SW +L++ Y
Sbjct: 158 LQIHAHSIKTGLSSNLFVKNTLMRFYAVSG---FIEAVEKVFDQGPHWDLISWTTLIQAY 214
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
K G +A++ F R D++ LV
Sbjct: 215 SKM-------------------------------GYPSEAIAAF---FRMNCTADRMTLV 240
Query: 258 AALSACAEIGDLKLGKWIHSYVEEN-FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFR 316
LSAC+++GD LGK I +Y++ + F V + V L NAL+ MY CG+ A +F
Sbjct: 241 VVLSACSQLGDFTLGKKILAYMDHHLFDVHSD---VFLGNALLDMYLKCGQPHLARQLFH 297
Query: 317 KMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDE 361
M +N VSW SMI+G A QG +EAL +T +GVL++C++ G ++
Sbjct: 298 LMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLEL 357
Query: 362 GRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGC 421
G+ +++N +K +VD++++ G +D+AF + Q M K + ++++G
Sbjct: 358 GKWVHSYIDKN-HMKADGYVANALVDMYAKCGSIDQAFMVFQAMKCK-DVYSYTAMIVGF 415
Query: 422 RIHNNAELA 430
+H A+ A
Sbjct: 416 AMHGKADRA 424
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 18/216 (8%)
Query: 36 LFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHAR 95
LF +HS + + LL Y+ G A ++F + WN MI G A
Sbjct: 266 LFDVHSDVFLGN---------ALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAH 316
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
+++++++++M +PD T +L+ CA G G+ VH + + ++ ++
Sbjct: 317 QGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHMKADGYV 376
Query: 156 RTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP 214
L+++Y +CG + A ++F M + V S+ +++ G+ G D A IF EMP
Sbjct: 377 ANALVDMY----AKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHGKADRALAIFSEMP 432
Query: 215 HRNV----VSWTTMISGCAQNGKSRQALSLFNEMRR 246
V V+ ++S C+ G + F +M R
Sbjct: 433 RMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSR 468
>gi|357146237|ref|XP_003573921.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 531
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 171/492 (34%), Positives = 272/492 (55%), Gaps = 34/492 (6%)
Query: 53 YILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDK 112
++ LL+ Y G +A +F++ N S M R HA S +++ L++ MI
Sbjct: 47 HLPTALLSAYGALGRSGHARDLFDEMPNQSLVARTAMARAHAVSGQAAQALDLFQDMIAD 106
Query: 113 ETEPDEYTYSFLLSVC---ARCGLFRE-GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGG 168
PD + +L+ C C R G VH ++A G +VF+ T L+ +Y G
Sbjct: 107 GFMPDNVALAVVLAACHGAGSCTARRSPGRMVHAFIVACGIEPDVFVSTELIRVY----G 162
Query: 169 ECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISG 227
E G + AR +FD MP +S ++WN+++ YV+ DI+ A+++F MP R+VVSW T+I+G
Sbjct: 163 ERGEMTVARRVFDSMPTKSTIAWNTMVHQYVRNKDIEAAYRLFLAMPRRDVVSWNTVIAG 222
Query: 228 CAQNGKSRQALSLFNEM---RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFS 284
G+ ++AL LF +M V + + LSACA G L+ G W+H Y+++N
Sbjct: 223 YCLVGRCKEALGLFRQMVSPSSCTVHPNGPTMSTVLSACAGAGCLETGIWVHLYIDKNQM 282
Query: 285 VGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQGYAQEAL 343
+L+ LI MYA CG I++A VF K +R+ SWT++I G A G A + L
Sbjct: 283 NDNG----TLDRCLIDMYAKCGSIDKALQVFEKAPGKRDLYSWTTVICGLAMHGRANDVL 338
Query: 344 ---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDL 388
+TF+GVL+AC+HGG VDEG F M + + I P+IEHYGCM+DL
Sbjct: 339 RMFSMMQDSGMCPDDVTFVGVLNACAHGGLVDEGLHHFYSMQEKYRITPKIEHYGCMIDL 398
Query: 389 FSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAG 448
R G + EA+ ++Q MPMKPN + G+ L C++H++ EL ++A V +DP+
Sbjct: 399 LGRVGRLPEAYRMIQTMPMKPNMVIWGAFLSACKVHSSVELG-EIAAAEVTRLDPDDPWA 457
Query: 449 YLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASL 508
+ +++++YA A+ W +A R++M + ++K PG S V ++G +H+FVAG + + +
Sbjct: 458 RV-MMSSMYAKAQDWSGLARERREMNSLQMKKTPGCSSVALDGEVHEFVAGGNQHPLCAE 516
Query: 509 IYKTLGEITMQA 520
I L + Q+
Sbjct: 517 ICSVLETVEAQS 528
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 133/329 (40%), Gaps = 73/329 (22%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H+ I+ G ++ +L+ Y G + A +VF+ ST WN M+ + R++
Sbjct: 138 VHAFIVACGIEPDVFVSTELIRVYGERGEMTVARRVFDSMPTKSTIAWNTMVHQYVRNKD 197
Query: 99 -----------PEKSVY--------------------LYKQMIDKET---EPDEYTYSFL 124
P + V L++QM+ + P+ T S +
Sbjct: 198 IEAAYRLFLAMPRRDVVSWNTVIAGYCLVGRCKEALGLFRQMVSPSSCTVHPNGPTMSTV 257
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPA 184
LS CA G G VH ++I N MN G R L D
Sbjct: 258 LSACAGAGCLETGIWVH-----------LYIDKNQMN----DNGTLD----RCLID---- 294
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEMP-HRNVVSWTTMISGCAQNGKSRQALSLFNE 243
Y K G ID A ++F++ P R++ SWTT+I G A +G++ L +F+
Sbjct: 295 -----------MYAKCGSIDKALQVFEKAPGKRDLYSWTTVICGLAMHGRANDVLRMFSM 343
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
M+ + + D V V L+ACA G + G ++E + + + + +I +
Sbjct: 344 MQDSGMCPDDVTFVGVLNACAHGGLVDEGLHHFYSMQEKYRITPK---IEHYGCMIDLLG 400
Query: 304 SCGEIEEAYGVFRKM-QRRNTVSWTSMIT 331
G + EAY + + M + N V W + ++
Sbjct: 401 RVGRLPEAYRMIQTMPMKPNMVIWGAFLS 429
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 170/500 (34%), Positives = 271/500 (54%), Gaps = 57/500 (11%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
FQ H+ I+ GF ++ L++ Y G +VF+ TE+ W MI G R+
Sbjct: 123 FQFHAHILKFGFDSDLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRN 182
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYC-SNVFI 155
++ +++ + +M +E T +L + R G +HG L +G +VFI
Sbjct: 183 DSSLEAMTYFVEMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFI 242
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
++L+++Y G+CG +DD A K+FDEMP
Sbjct: 243 GSSLVDMY----GKCGC------YDD------------------------AQKVFDEMPS 268
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
RNVV+WT +I+G Q + + +F EM ++ V ++ L + LSACA +G L G+ +
Sbjct: 269 RNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRV 328
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
H YV +N S+ + ++ LI YA CG +EEA VF +++ +N +WT+MI GFA
Sbjct: 329 HCYVIKN-SI---EINTTVGTTLIDFYAKCGCLEEAILVFERLREKNVYTWTAMINGFAA 384
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
GYA A+ +TF+ VLSAC+HGG V+EGR+ F M + + ++P+ +
Sbjct: 385 HGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGRRLFLSMKERFNLEPKAD 444
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HY CMVDLF R GL++EA +L++ MPM+P +AV G+L C IH + EL A +++ +
Sbjct: 445 HYACMVDLFGRKGLLEEAKALIERMPMEPTNAVWGALFGSCLIHKDYELGKYAASRVI-K 503
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
+ P + Y L+AN+Y+ ++ W DVA VR++M V K PG SW+++ G LH+F+A D
Sbjct: 504 LQPSHSGRY-TLLANLYSESQNWDDVARVRKQMKDQQVVKSPGCSWIEVKGKLHEFIAFD 562
Query: 501 STYK-QASLIYKTLGEITMQ 519
++ +YKTL + +Q
Sbjct: 563 DKKPLESDDLYKTLDNVGVQ 582
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 180/394 (45%), Gaps = 66/394 (16%)
Query: 38 QIHSQIIING--FSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGH-- 93
QIH ++ + +++++ L++LL + A ++ + + PS +W+ ++ GH
Sbjct: 20 QIHCLVLTSPIFYTRRDLFLSRLLRRCTAATQFRYARRLLCQIQTPSIQLWDSLV-GHFS 78
Query: 94 ARSETPEKSVYL-YKQMIDKETEPDEYTYSFLLSVCARCGLFREGE--QVHGRVLASGYC 150
R + +L Y+QM P +T+ LL + R+ Q H +L G+
Sbjct: 79 GRVTLNRRLSFLSYRQMRRNGVVPSRHTFPPLLKAVFK---LRDANPFQFHAHILKFGFD 135
Query: 151 SNVFIRTNLMNLYLMSGGECGV-GCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKI 209
S++F+R +L++ Y CG+ +FD + VVSW +++ G+V+
Sbjct: 136 SDLFVRNSLISGY----SNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVR---------- 181
Query: 210 FDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDL 269
N S +A++ F EM+R+ V +++ +V+ L A + D+
Sbjct: 182 ---------------------NDSSLEAMTYFVEMKRSGVAANEMTVVSVLKATRKAEDV 220
Query: 270 KLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSM 329
+ G+ IH + E GR V + ++L+ MY CG ++A VF +M RN V+WT++
Sbjct: 221 RFGRSIHGFYLE---AGRVRCDVFIGSSLVDMYGKCGCYDDAQKVFDEMPSRNVVTWTAL 277
Query: 330 ITG------FAKQGYAQEALL---------TFLGVLSACSHGGFVDEGRQFFECMNQNWG 374
I G F K + E +L T VLSAC+H G + GR+ C
Sbjct: 278 IAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRR-VHCYVIKNS 336
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
I+ ++D +++ G ++EA + + + K
Sbjct: 337 IEINTTVGTTLIDFYAKCGCLEEAILVFERLREK 370
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 171/515 (33%), Positives = 276/515 (53%), Gaps = 55/515 (10%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H ++ + Y+ LL Y G + +VFE+ W+ MI +A+S
Sbjct: 164 VHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQ 223
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
++V L+ QM P+++T++ +L CA + G+QVH VL G NVF+
Sbjct: 224 SREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNA 283
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
LM++Y K G +D + K+F E+P+RN
Sbjct: 284 LMDVY----------------------------------AKCGRLDNSMKLFMELPNRNE 309
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
V+W TMI G Q+G +ALSL+ M +V +V + L ACA + ++LG IHS
Sbjct: 310 VTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSL 369
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ ++ + V+V NALI MYA CG I+ A VF + R+ +SW +MI+G++ G
Sbjct: 370 SLK--TIYDKDVVVG--NALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGL 425
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
EAL LTF+ +LSACS+ G +D G+ +F+ M Q++GI+P +EHY
Sbjct: 426 VGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYT 485
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
CMV L R+G +D+A L++ +P++PN V +LL C IHN+ +L AQ+++ +IDP
Sbjct: 486 CMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQIL-QIDP 544
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
+ A ++ L++N+YA +RW VA+VR+ M GV+K PG SW++ G++H F GD+++
Sbjct: 545 QDEATHV-LLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGDTSH 603
Query: 504 KQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+I L + M+ + GY PD++ + +E+
Sbjct: 604 PDMKMISGMLEWLNMKTEKAGYVPDLNAVLRDVED 638
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 195/418 (46%), Gaps = 57/418 (13%)
Query: 23 IFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPS 82
I LL + + +H+ I G ++ L+ Y G + +A + F+
Sbjct: 47 ILKLLVSVECAELAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKD 106
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHG 142
W M+ +A ++ + S+ L+ +M P+ +T++ +L C F G+ VHG
Sbjct: 107 MVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHG 166
Query: 143 RVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGD 202
VL + Y M+LY+ GVG LL Y K GD
Sbjct: 167 CVLKTCY---------EMDLYV------GVG-------------------LLDLYTKFGD 192
Query: 203 IDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSA 262
+ ++F+EMP +V+ W+ MIS AQ+ +SR+A+ LF +MRRA V +Q + L +
Sbjct: 193 ANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQS 252
Query: 263 CAEIGDLKLGKWIHSYVEENFSVGRE-PVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR 321
CA I +L+LGK +H +V VG + V VS NAL+ +YA CG ++ + +F ++ R
Sbjct: 253 CASIENLQLGKQVHCHV---LKVGLDGNVFVS--NALMDVYAKCGRLDNSMKLFMELPNR 307
Query: 322 NTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFF 366
N V+W +MI G+ + G +AL +T+ VL AC+ ++ G Q
Sbjct: 308 NEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIH 367
Query: 367 ECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
+ K + ++D++++ G + A LV +M + ++ +++ G +H
Sbjct: 368 SLSLKTIYDKDVVVG-NALIDMYAKCGSIKNA-RLVFDMLSERDEISWNAMISGYSMH 423
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 20/209 (9%)
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
MP RN VS+ T+I G Q+ + + + LF+ + R L+ L + +L
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 273 KWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
+H+ + + +G E + ALI YA CG + A F + ++ VSWT M+
Sbjct: 61 YSLHACI---YKLGHESNAF-VGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVAC 116
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
+A+ Q++L TF GVL AC G+ C+ +
Sbjct: 117 YAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMD 176
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMP 406
G ++DL+++ G ++ + + MP
Sbjct: 177 LYVGVG-LLDLYTKFGDANDVLRVFEEMP 204
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 3/168 (1%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIHS + + + + L+ Y G + NA VF+ WN MI G++
Sbjct: 365 QIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHG 424
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ ++ M + E P++ T+ +LS C+ GL G Q + + + Y +
Sbjct: 425 LVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIG-QNYFKSMVQDYGIEPCMEH 483
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPAR-SVVSWNSLLKGYVKRGDID 204
++L+ G + A L +++P +V W +LL V D+D
Sbjct: 484 YTCMVWLL-GRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVD 530
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 163/518 (31%), Positives = 271/518 (52%), Gaps = 59/518 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+HS ++ GF+ + LL+ Y SG L +AHKVFE+ S W + G+ +
Sbjct: 132 DLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAG 191
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ L+K+M++ PD Y +LS C G GE + + N F+RT
Sbjct: 192 KHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRT 251
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+NLY K G ++ A +FD M ++
Sbjct: 252 TLVNLY----------------------------------AKCGKMEKARSVFDSMGEKD 277
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+V+W+TMI G A N ++ + F +M + + DQ ++V LS+CA +G L LG+W S
Sbjct: 278 IVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGIS 337
Query: 278 YVEENFSVGREPVLVSL--NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
++ R L +L NALI MYA CG + + VF++M+ ++ V + I+G AK
Sbjct: 338 LID------RHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAK 391
Query: 336 QGYAQEALL---------------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
G+ + + TFLG+L C H G + +G +FF ++ + +K +E
Sbjct: 392 NGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVE 451
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HYGCMVDL+ RAG++D+A+ L+ +MPM+PN V G+LL GCR+ + +LA V ++L+A
Sbjct: 452 HYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIA- 510
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
++P A Y+ L +N+Y+ + RW + A VR M + G++K PG SW+++ G +H+F+A D
Sbjct: 511 LEPWNAGNYVQL-SNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIELEGTVHEFLADD 569
Query: 501 STYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++ + IY L ++ + G+ P +F +E+
Sbjct: 570 KSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVED 607
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 168/518 (32%), Positives = 278/518 (53%), Gaps = 58/518 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H +I+ G + + L+ Y G + A +F++ + W +I G+A+
Sbjct: 169 KVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQG 228
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+ ++ L + M E P++ T++ +L C G++VH ++ SGY
Sbjct: 229 QVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGY-------- 280
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
R + NSL+ Y K G ++ A K+F ++PHR+
Sbjct: 281 --------------------------GRELWVVNSLITMYCKCGGLEEARKLFSDLPHRD 314
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VV+WT M++G AQ G +A++LF M++ + D++ + L++C+ L+ GK IH
Sbjct: 315 VVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQ 374
Query: 278 -YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF-AK 335
V +++ V L +AL+ MYA CG +++A VF +M RN V+WT++ITG A+
Sbjct: 375 QLVHAGYNLD-----VYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQ 429
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
G +EAL +TF VLSAC+H G V+EGR+ F M ++GIKP +E
Sbjct: 430 HGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVE 489
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HY C VDL RAG ++EA +++ +MP P +V G+LL CR+H++ E + A+ V +
Sbjct: 490 HYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAEN-VLK 548
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
+DP+ Y+AL +++YAAA R++D VRQ M K V K PGQSW++++G +H F D
Sbjct: 549 LDPDDDGAYVAL-SSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVED 607
Query: 501 STYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++ ++ IY LG++T Q + GY PD + ++E
Sbjct: 608 KSHPESEQIYVELGKLTEQIKEMGYVPDTRFVLHDVDE 645
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 191/400 (47%), Gaps = 57/400 (14%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H+ I+ +G Y+ LL+ Y G L +A +VF+ + + W MI
Sbjct: 68 EVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGN 127
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++ Y+ M +PD+ T+ LL+ L + G++VH ++ +G + T
Sbjct: 128 KNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGT 187
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
+L+ +Y +CG + AR++FD +P ++VV+W L+ GY ++G +D
Sbjct: 188 SLVGMY----AKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVD------------ 231
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
AL L M++A V +++ + L C L+ GK +H
Sbjct: 232 -------------------VALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVH 272
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
Y+ ++ GRE +V N+LI MY CG +EEA +F + R+ V+WT+M+TG+A+
Sbjct: 273 RYIIQS-GYGRELWVV---NSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQL 328
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G+ EA+ +TF VL++CS F+ EG++ + + + G +
Sbjct: 329 GFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQL-VHAGYNLDVYL 387
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGC 421
+V ++++ G MD+A SLV N + N +++ GC
Sbjct: 388 QSALVSMYAKCGSMDDA-SLVFNQMSERNVVAWTAIITGC 426
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 148/363 (40%), Gaps = 86/363 (23%)
Query: 124 LLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMP 183
LL CAR +G +VH +L SG N ++
Sbjct: 53 LLQECARLRSLEQGREVHAAILKSGIQPNRYLE--------------------------- 85
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
N+LL Y K G + A ++FD + RN+VSWT MI K+ +A +
Sbjct: 86 -------NTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYET 138
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
M+ A D+V V+ L+A L+LG+ +H + E + EP + +L+ MYA
Sbjct: 139 MKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEA-GLELEP---RVGTSLVGMYA 194
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLG 348
CG+I +A +F ++ +N V+WT +I G+A+QG AL +TF
Sbjct: 195 KCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFAS 254
Query: 349 VLSACSHGGFVDEGRQFFECMNQN------WGIKPRIEHY-------------------- 382
+L C+ ++ G++ + Q+ W + I Y
Sbjct: 255 ILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRD 314
Query: 383 ----GCMVDLFSRAGLMDEAFSLVQNMP---MKPNDAVLGSLLLGCRIHNNAELASQVAQ 435
MV +++ G DEA +L + M +KP+ S+L C + ++ Q
Sbjct: 315 VVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQ 374
Query: 436 KLV 438
+LV
Sbjct: 375 QLV 377
>gi|108706388|gb|ABF94183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 823
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 162/462 (35%), Positives = 249/462 (53%), Gaps = 51/462 (11%)
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKE----TEPDEYTY 121
G + +A+ VF++ P ++N +IRG A + P +V LY +M+ + PD+ T+
Sbjct: 26 GAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTF 85
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGG------------- 168
F+L C G G QVH V+ +G S+ F++ L+ ++ G
Sbjct: 86 PFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAR 145
Query: 169 ---------------ECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
+G AR LFD+ P + +VSWN ++ Y KRGD+ A ++FD++
Sbjct: 146 EDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQV 205
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK 273
P R+VVSW MISG + G AL LF +M+R D V +++ LSACA+ GDL +G+
Sbjct: 206 PERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQ 265
Query: 274 WIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF 333
+HS + + FS PV+ L NALI MYA CG ++ A+ VF M+ ++ +W S++ G
Sbjct: 266 RLHSSLSDMFSRNGFPVV--LGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGL 323
Query: 334 AKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
A G+ E++ +TF+ VL ACSHGG VD+GR+FF M + ++P
Sbjct: 324 ALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPN 383
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
I+HYGCMVD+ RAGL+ EAF + M +PN + +LL CR+H ELA ++L+
Sbjct: 384 IKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQLL 443
Query: 439 AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRK 480
+ E +G L++N+YA+ W +R+ M GV K
Sbjct: 444 KARNDE--SGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNK 483
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 125/281 (44%), Gaps = 36/281 (12%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
++ Y G + A ++F++ WN MI G+ R + ++ L++QM +PD
Sbjct: 185 MITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPD 244
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
T LLS CA G G+++H + S++F R
Sbjct: 245 IVTMLSLLSACADSGDLDVGQRLHSSL------SDMFSRNGF------------------ 280
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
VV N+L+ Y K G + A ++F M ++V +W +++ G A +G ++
Sbjct: 281 --------PVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLES 332
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
+ +F +M + +V D++ VA L AC+ G + G+ + ++ + V EP +
Sbjct: 333 IDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRV--EPNIKHY-GC 389
Query: 298 LIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQG 337
++ M G ++EA+ M+ N+V W ++++ G
Sbjct: 390 MVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHG 430
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 27/240 (11%)
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM----RRARVGLDQVA 255
RG I A+ +FD++P + + T+I G A R A+SL+ M V D++
Sbjct: 25 RGAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLT 84
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
L AC +G G +H++V G E + NALI M+ASCG + A +F
Sbjct: 85 FPFVLRACTAMGAGDTGVQVHAHV---VKAGCESDAF-VKNALIGMHASCGNLGIAAALF 140
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEA-----------LLTFLGVLSACSHGGFVDEGRQ 364
R + V+W++MITG A++G A L+++ +++A + G + R+
Sbjct: 141 DGRAREDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARE 200
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL---VQNMPMKPNDAVLGSLLLGC 421
F+ + + + + M+ + R G A L +Q M KP+ + SLL C
Sbjct: 201 LFDQVPER-----DVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSAC 255
>gi|22328607|ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635650|sp|O23266.3|PP308_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14050, mitochondrial; Flags: Precursor
gi|332657965|gb|AEE83365.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 166/529 (31%), Positives = 298/529 (56%), Gaps = 29/529 (5%)
Query: 30 RNTTKTLFQ-IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQ 88
RN T T + +H+ I+ G Q + L+ Y G +A +VF++ + W
Sbjct: 15 RNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWAS 74
Query: 89 MIRGHARSETPEKSVYLYKQMIDKET-EPDEYTYSFLLSVCARCGLFREGEQVHGRVLAS 147
++ ++ K++ ++ + PD++ +S L+ CA G G QVH + S
Sbjct: 75 VLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVS 134
Query: 148 GYCSNVFIRTNLMNLYLMSGGECGV-GCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGA 206
Y ++ ++++L+++Y +CG+ A+ +FD + ++ +SW +++ GY K G + A
Sbjct: 135 EYANDEVVKSSLVDMY----AKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEA 190
Query: 207 WKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG-LDQVALVAALSACAE 265
++F +P +N+ SWT +ISG Q+GK +A S+F EMRR RV LD + L + + ACA
Sbjct: 191 LELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACAN 250
Query: 266 IGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVS 325
+ G+ +H V ++G + V ++NALI MYA C ++ A +F +M+ R+ VS
Sbjct: 251 LAASIAGRQVHGLV---IALGFDSC-VFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVS 306
Query: 326 WTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMN 370
WTS+I G A+ G A++AL +TF+G++ ACSH GFV++GR+ F+ M
Sbjct: 307 WTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMT 366
Query: 371 QNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELA 430
+++GI+P ++HY C++DL R+GL+DEA +L+ MP P++ +LL C+ ++
Sbjct: 367 KDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMG 426
Query: 431 SQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQIN 490
++A LV+ + + Y+ L++N+YA+A W V+ R+K+ +M VRK PG S V++
Sbjct: 427 IRIADHLVSSFKLKDPSTYI-LLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVR 485
Query: 491 GVLHDFVAGDSTYKQASLIYKTLGEITMQA-MQEGYKPDISELFLGIEE 538
F AG++++ I++ L ++ + ++ GY PD S + ++E
Sbjct: 486 KETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDE 534
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 39/227 (17%)
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL-LF 179
Y L +CAR + +H ++ G + L+N+Y G+CG L +F
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVY----GKCGAASHALQVF 61
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
D+MP R ++W S+L T ++ +GK+ S
Sbjct: 62 DEMPHRDHIAWASVL----------------------------TALNQANLSGKTLSVFS 93
Query: 240 LFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
R D A + ACA +G + G+ +H + F V + ++L+
Sbjct: 94 SVGSSSGLRP--DDFVFSALVKACANLGSIDHGRQVHCH----FIVSEYANDEVVKSSLV 147
Query: 300 HMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
MYA CG + A VF ++ +NT+SWT+M++G+AK G +EAL F
Sbjct: 148 DMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELF 194
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 162/517 (31%), Positives = 283/517 (54%), Gaps = 25/517 (4%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH+ +I ++ + +L+ Y G L A ++F + + WN MI G+ ++
Sbjct: 500 QIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNG 559
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++++ L+KQM +PD ++ S +LS C ++G ++H ++ + ++
Sbjct: 560 ETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQV 619
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L+++Y +CG + A ++D + V+ N ++ +V G + A +FD+M R
Sbjct: 620 VLVDMY----AKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQR 675
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
N W ++++G A G +++ + F EM + + D + +V ++ C+ + L+ G +H
Sbjct: 676 NTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLH 735
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
S + G V L AL+ MY+ CG I +A VF M +N VSW +MI+G++K
Sbjct: 736 SLI---IKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKH 792
Query: 337 GYAQEALL---------------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G ++EAL+ TFL +LSACSH G V+EG + F M +++ I+ + EH
Sbjct: 793 GCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEH 852
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
Y CMVDL RAG +++A V+ MP++P + G+LL CR+H + ++ AQ+L E+
Sbjct: 853 YTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLF-EL 911
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
DP+ Y+ +++N+YAAA RW++V +RQ M GV+K PG SW++IN + F AG
Sbjct: 912 DPQNPGPYV-IMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSK 970
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
T+ + IY L +T+Q+ GY PD S + +++
Sbjct: 971 THPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKD 1007
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 126/471 (26%), Positives = 208/471 (44%), Gaps = 62/471 (13%)
Query: 7 IPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSG 66
I PA+ L + N+ + IH+Q+I NG++ Y++ K+L Y SG
Sbjct: 61 IHTKPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSG 120
Query: 67 YLIN---AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSF 123
L + A K+FE+ + WN MI +AR + + + LY +M D++T+
Sbjct: 121 CLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPS 180
Query: 124 LLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMP 183
++ C Q+ V+ +G N+F+ L++ Y G + A D++
Sbjct: 181 VIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFG---WMDDAVTSLDEIE 237
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
SVV+WN+++ GYVK + AW IFD M I C N AL +
Sbjct: 238 GTSVVTWNAVIAGYVKILSWEEAWGIFDRM---------LKIGVCPDNFTFASALRVCGA 288
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
+ R+R G QV + L AC GD +G NALI MYA
Sbjct: 289 L-RSRDGGKQVH--SKLIACGFKGDTFVG-----------------------NALIDMYA 322
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFL---------------G 348
C + E VF +M RN V+W S+I+ A+ G+ +AL+ FL
Sbjct: 323 KCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGS 382
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
+L A + + +GR+ + +N + I +VD++S+ G+++EA + +++ ++
Sbjct: 383 ILMASAGLADIGKGRELHGHLVRNL-LNSDIILGSALVDMYSKCGMVEEAHQVFRSL-LE 440
Query: 409 PNDAVLGSLLLGCRIHNNAELASQVAQKLVAE--IDPEQ--AAGYLALVAN 455
N+ +LL G AE A ++ + +E I P+Q L L AN
Sbjct: 441 RNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCAN 491
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/490 (23%), Positives = 212/490 (43%), Gaps = 88/490 (17%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+ S ++ G + ++ L+ Y G++ +A ++ E S WN +I G+ +
Sbjct: 196 QLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKIL 255
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+ E++ ++ +M+ PD +T++ L VC G+QVH +++A G+ + F+
Sbjct: 256 SWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGN 315
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y E C + +FD+M R+ V+WNS+
Sbjct: 316 ALIDMYAKCDDE--ESCLK-VFDEMGERNQVTWNSI------------------------ 348
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
IS AQ G AL LF M+ + ++ L + L A A + D+ G+ +H
Sbjct: 349 -------ISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHG 401
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
++ N + L +AL+ MY+ CG +EEA+ VFR + RN VS+ +++ G+ ++G
Sbjct: 402 HLVRNLLNSD----IILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEG 457
Query: 338 YAQEAL----------------LTFLGVLSACSHGGFVDEGRQ----------------- 364
A+EAL TF +L+ C++ ++GRQ
Sbjct: 458 KAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVE 517
Query: 365 ------FFECMNQNWG--IKPRIEH-----YGCMVDLFSRAGLMDEAFSLVQNMPM---K 408
+ EC N+ I R+ + M++ + + G EA L + M + K
Sbjct: 518 TELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIK 577
Query: 409 PNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAA 468
P+ L S+L C ++++ ++ +V E+ + LV ++YA
Sbjct: 578 PDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLV-DMYAKCGSMDYAWK 636
Query: 469 VRQKMIKMGV 478
V + IK V
Sbjct: 637 VYDQTIKKDV 646
>gi|356496086|ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 185/554 (33%), Positives = 294/554 (53%), Gaps = 63/554 (11%)
Query: 7 IPANPATSSK---ALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV 63
+P +P SS+ + SLL+ + + ++H+ I+ G ++ + L+A
Sbjct: 15 LPNSPLQSSELNAKFNEQGWLSLLKRCKSMEEFKKVHAHILKLGLFYDSFCGSNLVASCA 74
Query: 64 TS--GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
S G + A +F + E P + +N MIRG+ S E+++ LY +M+++ EPD +TY
Sbjct: 75 LSRWGSMEYACSIFRQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTY 134
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFD 180
F+L C+ +EG Q+H V +G +VF++ L+++Y G+CG + A ++F+
Sbjct: 135 PFVLKACSLLVALKEGVQIHAHVFNAGLEVDVFVQNGLISMY----GKCGAIEHAGVVFE 190
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSL 240
M +SV SW+S++ GA H +V W + L L
Sbjct: 191 QMDEKSVASWSSII----------GA--------HASVEMW-------------HECLML 219
Query: 241 FNEM-RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
+M R R ++ LV+ALSAC +G LG+ IH + N S + V + +LI
Sbjct: 220 LGDMSREGRHRAEESILVSALSACTHLGSPNLGRCIHGILLRNIS----ELNVVVKTSLI 275
Query: 300 HMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF------------- 346
MY CG +E+ VF+ M +N S+T MI G A G +EAL F
Sbjct: 276 DMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREALRVFSDMLEEGLTPDDV 335
Query: 347 --LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQN 404
+GVLSACSH G V EG Q F M IKP I+HYGCMVDL RAG++ EA+ L+++
Sbjct: 336 VYVGVLSACSHAGLVKEGFQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKS 395
Query: 405 MPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQ 464
MP+KPND V SLL C++H+N E+ ++A + +++ YL L AN+YA A++W
Sbjct: 396 MPIKPNDVVWRSLLSACKVHHNLEIG-EIAADNIFKLNKHNPGDYLVL-ANMYARAQKWA 453
Query: 465 DVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEG 524
+VA +R +M++ + + PG S V+ N ++ FV+ D + Q IY + ++ Q EG
Sbjct: 454 NVARIRTEMVEKNLVQTPGFSLVEANRNVYKFVSQDKSQPQCETIYDMIQQMEWQLKFEG 513
Query: 525 YKPDISELFLGIEE 538
Y PD+S++ L ++E
Sbjct: 514 YTPDMSQVLLDVDE 527
>gi|222624265|gb|EEE58397.1| hypothetical protein OsJ_09562 [Oryza sativa Japonica Group]
Length = 523
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 165/463 (35%), Positives = 252/463 (54%), Gaps = 53/463 (11%)
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKE----TEPDEYTY 121
G + +A+ VF++ P ++N +IRG A + P +V LY +M+ + PD+ T+
Sbjct: 26 GAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTF 85
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV--------- 172
F+L C G G QVH V+ +G S+ F++ L+ ++ S G G+
Sbjct: 86 PFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMH-ASCGNLGIAAALFDGRA 144
Query: 173 ------------GCARL--------LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDE 212
GCAR LFD+ P + +VSWN ++ Y KRGD+ A ++FD+
Sbjct: 145 REDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQ 204
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
+P R+VVSW MISG + G AL LF +M+R D V +++ LSACA+ GDL +G
Sbjct: 205 VPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVG 264
Query: 273 KWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
+ +HS + + FS PV+ L NALI MYA CG ++ A+ VF M+ ++ +W S++ G
Sbjct: 265 QRLHSSLSDMFSRNGFPVV--LGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGG 322
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
A G+ E++ +TF+ VL ACSHGG VD+GR+FF M + ++P
Sbjct: 323 LALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEP 382
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
I+HYGCMVD+ RAGL+ EAF + M +PN + +LL CR+H ELA ++L
Sbjct: 383 NIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQL 442
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRK 480
+ + E +G L++N+YA+ W +R+ M GV K
Sbjct: 443 LKARNDE--SGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNK 483
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 125/281 (44%), Gaps = 36/281 (12%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
++ Y G + A ++F++ WN MI G+ R + ++ L++QM +PD
Sbjct: 185 MITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPD 244
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
T LLS CA G G+++H + S++F R
Sbjct: 245 IVTMLSLLSACADSGDLDVGQRLHSSL------SDMFSRNGF------------------ 280
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
VV N+L+ Y K G + A ++F M ++V +W +++ G A +G ++
Sbjct: 281 --------PVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLES 332
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
+ +F +M + +V D++ VA L AC+ G + G+ + ++ + V EP +
Sbjct: 333 IDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRV--EPN-IKHYGC 389
Query: 298 LIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQG 337
++ M G ++EA+ M+ N+V W ++++ G
Sbjct: 390 MVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHG 430
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 116/256 (45%), Gaps = 27/256 (10%)
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM----RRARVGLDQVA 255
RG I A+ +FD++P + + T+I G A R A+SL+ M V D++
Sbjct: 25 RGAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLT 84
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
L AC +G G +H++V G E + NALI M+ASCG + A +F
Sbjct: 85 FPFVLRACTAMGAGDTGVQVHAHV---VKAGCESDAF-VKNALIGMHASCGNLGIAAALF 140
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEA-----------LLTFLGVLSACSHGGFVDEGRQ 364
R + V+W++MITG A++G A L+++ +++A + G + R+
Sbjct: 141 DGRAREDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARE 200
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL---VQNMPMKPNDAVLGSLLLGC 421
F+ + + + + M+ + R G A L +Q M KP+ + SLL C
Sbjct: 201 LFDQVPER-----DVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSAC 255
Query: 422 RIHNNAELASQVAQKL 437
+ ++ ++ L
Sbjct: 256 ADSGDLDVGQRLHSSL 271
>gi|297851626|ref|XP_002893694.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339536|gb|EFH69953.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 174/549 (31%), Positives = 293/549 (53%), Gaps = 60/549 (10%)
Query: 10 NPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQII-INGFSQKNYILAKLLAFYVTSGY- 67
NP ++ ++ LL+ N Q+H++ I ++ F ++ + +LA SG+
Sbjct: 21 NPEVNNCGGKEQECLYLLKRCNNIDEFKQVHARFIKLSLFCSSSFSASSVLAKCAHSGWE 80
Query: 68 --LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
+ A +F ++P T + MIRG+ + E ++ Y +M+++ EPD +TY LL
Sbjct: 81 NSMNYAASIFRGIDDPCTFDFKTMIRGYVNEMSFEVALCFYNEMMERGIEPDNFTYPCLL 140
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPAR 185
C R REG+Q+HG V G ++VF++ +L+N+Y G CG
Sbjct: 141 KACTRLKAIREGKQIHGHVFKLGLEADVFVQNSLINMY----GRCG-------------- 182
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM- 244
+++ + +F+++ ++ SW++M S C G + L LF EM
Sbjct: 183 ----------------EMELSSTVFEKLEFKSAASWSSMFSACVGMGMWSECLMLFREMC 226
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYAS 304
R + ++ +V+ALSACA G L LG IH ++ N S + + + +L+ MY
Sbjct: 227 RETNLKAEESGMVSALSACANTGALNLGMSIHGFLLRNIS----ELNIIVKTSLVDMYVK 282
Query: 305 CGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGV 349
CG I+ A +F+KM++RN +++++MI+GFA G + AL + ++ +
Sbjct: 283 CGCIDNALHIFQKMEKRNNLTYSAMISGFALHGEGESALRMFSEMIKEGLEPDHVVYVSL 342
Query: 350 LSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKP 409
L+ACSH G V EGR+ F M + ++P EHYGC+VDL RAGL++EA +Q++P++
Sbjct: 343 LNACSHSGLVKEGRRVFGEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEQ 402
Query: 410 NDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAV 469
ND V S L CR+H N EL AQ+L+ ++ YL L++N+Y+ A W DVA
Sbjct: 403 NDVVWRSFLSQCRVHQNIELGQIAAQELL-KLCSHNPGDYL-LISNMYSQAHMWDDVARS 460
Query: 470 RQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDI 529
R ++ G+++ PG S V++ G H FV+ D ++ Q IYK L ++ Q EGY PD+
Sbjct: 461 RTEIAIKGLKQTPGFSTVKVKGKTHRFVSQDRSHPQCKEIYKMLHQMEWQLKFEGYSPDL 520
Query: 530 SELFLGIEE 538
+++ L ++E
Sbjct: 521 TQILLNVDE 529
>gi|356533546|ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Glycine max]
Length = 483
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 167/481 (34%), Positives = 256/481 (53%), Gaps = 25/481 (5%)
Query: 21 RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTEN 80
R+I LL T L +IH + +G Q N ILA ++ + + A ++F T N
Sbjct: 9 RKILRLLHGGKTRSHLTEIHGHFLRHGLQQSNQILAHFVSVCASLRRVPYATRLFAHTHN 68
Query: 81 PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
P+ ++N +I+ H+ S + M + PDEYT + L + + G V
Sbjct: 69 PNILLFNAIIKAHSLHPPFHASFSFFSLMKTRAISPDEYTLAPLFKSASNLRYYVLGGCV 128
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVK 199
H V+ G+ + +R + +Y C +G A +FD+M VV WN +++G+ K
Sbjct: 129 HAHVVRLGFTRHASVRVAALEVY----ASCERMGDASKVFDEMRDPDVVVWNLMIRGFCK 184
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
GD++ K+F +M R VVSW M+S A+N K +AL LFNEM D +LV
Sbjct: 185 MGDLETGMKVFGQMKERTVVSWNLMMSCLAKNNKEEKALELFNEMLEQGFEPDDASLVTV 244
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
L CA +G + +G+WIHSY S G +++ N+L+ Y CG ++ A+ +F M
Sbjct: 245 LPVCARLGAVDIGEWIHSYAN---SKGFLQDTINVGNSLVDFYCKCGNLQAAWSIFNDMA 301
Query: 320 RRNTVSWTSMITGFAKQGYAQ------EALL---------TFLGVLSACSHGGFVDEGRQ 364
+N VSW +MI+G A G + E ++ TF+GVL+ C+H G VD GR
Sbjct: 302 SKNVVSWNAMISGLAYNGEGEVGVNLFEEMVHGGFEPNDSTFVGVLACCAHVGLVDRGRD 361
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
F M+ + + P++EHYGC+VDL R G + EA L+ +MP+KP A+ G+LL CR +
Sbjct: 362 LFASMSVKFKVSPKLEHYGCVVDLLGRCGHVREARDLITSMPLKPTAALWGALLSACRTY 421
Query: 425 NNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQ 484
+ E+A A++LV ++P + Y+ L++NVYA RW +V VR M GV+K PGQ
Sbjct: 422 GDREIAENAAKELV-RLEPWNSGNYV-LLSNVYAEEGRWDEVEKVRVLMRGGGVKKVPGQ 479
Query: 485 S 485
S
Sbjct: 480 S 480
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 174/492 (35%), Positives = 273/492 (55%), Gaps = 28/492 (5%)
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKET-EPDEYTYSFL 124
G + A +FE + + WN +I G+ ++ K+++ + +M+ T PDE+T + +
Sbjct: 242 GRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSV 301
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDD--M 182
LS CA G+ G+QVH +L S + L+++Y SG V AR + M
Sbjct: 302 LSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGS---VENARGVMQQAVM 358
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
+V+S+ +LL+GYVK GD+ A ++FD M +R+VV+WT MI G QNG + +A+ LF
Sbjct: 359 ADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFR 418
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMY 302
M R+ + + A LS CA + L+ GK IH + + S++N+++ MY
Sbjct: 419 LMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSL----QEQSSSVSNSIVTMY 474
Query: 303 ASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQGYAQEAL---------------LTF 346
A G + A VF ++ R+ TV+WTSMI A+ G ++A+ +TF
Sbjct: 475 ARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITF 534
Query: 347 LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP 406
+GVLSAC+H GFVDEG+++F+ + GI P + HY CMVDL +RAGL EA +Q MP
Sbjct: 535 VGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMP 594
Query: 407 MKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDV 466
++P+ GSLL CR+H NA+LA A+KL++ IDP + Y AL +NVY+A RW D
Sbjct: 595 VEPDAIAWGSLLSACRVHKNADLAELAAEKLLS-IDPGNSGAYSAL-SNVYSACGRWNDA 652
Query: 467 AAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYK 526
A + ++ V+K G SW I +H F A D + Q +Y+T ++ + G+
Sbjct: 653 AKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGFV 712
Query: 527 PDISELFLGIEE 538
PD+ + +++
Sbjct: 713 PDLQSVLHDVDD 724
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 201/418 (48%), Gaps = 42/418 (10%)
Query: 49 SQKN-YILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYK 107
+Q+N + LL+ Y SG L +A VF + W M+ G R +++ ++
Sbjct: 92 AQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFL 151
Query: 108 QMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSG 167
M+ P ++T + +LS CA G +VH V+ G S V + +++N+Y
Sbjct: 152 DMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMY---- 207
Query: 168 GECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMIS 226
G+CG AR +F+ MP RSV SWN+++ G +D A +F+ MP R +VSW +I+
Sbjct: 208 GKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIA 267
Query: 227 GCAQNGKSRQALSLFNEM-RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSV 285
G QNG + +AL F+ M + + D+ + + LSACA +G + +GK +H+Y+ +
Sbjct: 268 GYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRS--- 324
Query: 286 GREPVLVSLNNALIHMYASCGEIEEAYGVFRK--MQRRNTVSWTSMITGFAKQGYAQEAL 343
R P + + NALI MYA G +E A GV ++ M N +S+T+++ G+ K G + A
Sbjct: 325 -RMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHA- 382
Query: 344 LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQ 403
R+ F+ M+ + + M+ + + G DEA L +
Sbjct: 383 -------------------REMFDVMSNR-----DVVAWTAMIVGYEQNGHNDEAMELFR 418
Query: 404 NMPM---KPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYA 458
M +PN + ++L C E Q+ K + + EQ++ + +YA
Sbjct: 419 LMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQ-EQSSSVSNSIVTMYA 475
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 159/351 (45%), Gaps = 64/351 (18%)
Query: 124 LLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGC--ARLLFDD 181
LL C G +H R + +G ++ ++ NL++ Y G G AR LFD+
Sbjct: 29 LLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDE 88
Query: 182 MPA--RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
+PA R+V +WNSLL Y K G + A +F EMP R+ VSWT M+ G + G+ +A+
Sbjct: 89 IPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIK 148
Query: 240 LFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
+F +M + Q L LS+CA +G+ +HS+V +G V + N+++
Sbjct: 149 MFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFV---VKLGLSSC-VPVANSVL 204
Query: 300 HMYASCGEIEEAYGVFRKMQRRNT-------------------------------VSWTS 328
+MY CG+ E A VF +M R+ VSW +
Sbjct: 205 NMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNA 264
Query: 329 MITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFECMNQN 372
+I G+ + G +AL T VLSAC++ G V G+Q
Sbjct: 265 VIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQV-----HA 319
Query: 373 WGIKPRIEHYG----CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLL 419
+ ++ R+ + G ++ +++++G ++ A ++Q M + + + LL
Sbjct: 320 YILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALL 370
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 124/277 (44%), Gaps = 39/277 (14%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
LL YV G + +A ++F+ N W MI G+ ++ ++++ L++ MI EP+
Sbjct: 369 LLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPN 428
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
YT + +LSVCA G+Q+H + + S
Sbjct: 429 SYTVAAVLSVCASLACLEYGKQIHCKAIRS------------------------------ 458
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN-VVSWTTMISGCAQNGKSRQ 236
+ +S NS++ Y + G + A ++FD + R V+WT+MI AQ+G
Sbjct: 459 ----LQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGED 514
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
A+ LF EM R V D++ V LSAC +G + GK +++ + E +S
Sbjct: 515 AVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPE---MSHYA 571
Query: 297 ALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITG 332
++ + A G EA ++M + ++W S+++
Sbjct: 572 CMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSA 608
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 177/523 (33%), Positives = 285/523 (54%), Gaps = 37/523 (7%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H+ + F +I +LL Y G L++A +F++ + WN MI G+A+
Sbjct: 108 RVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLG 167
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E++ L+ +M + D ++++ +S RE ++ RV+ S+ +
Sbjct: 168 RLEQARKLFDEMPQR----DNFSWNAAISGYVTHNQPREALELF-RVMQRHERSS----S 218
Query: 158 NLMNLYLMSGGECGVGCARL-------LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIF 210
N L + C RL L V W++LL Y K G +D A IF
Sbjct: 219 NKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIF 278
Query: 211 DEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLK 270
D+M R+VVSWTTMI C ++G+ + LF ++ ++ V ++ L+ACA+
Sbjct: 279 DQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEH 338
Query: 271 LGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMI 330
LGK +H Y+ G +P +++ AL+HMY+ CG A VF +M + + VSWTS+I
Sbjct: 339 LGKEVHGYM---MHAGYDPGSFAIS-ALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLI 394
Query: 331 TGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGI 375
G+A+ G EAL +T++GVLSAC+H G VD+G ++F + + G+
Sbjct: 395 VGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGL 454
Query: 376 KPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQ 435
+HY C++DL +R+G EA +++ NMP+KP+ + SLL GCRIH N ELA + A+
Sbjct: 455 MHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAK 514
Query: 436 KLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHD 495
L EI+PE A Y+ L AN+YA A W +VA VR+ M MG+ K PG+SW++I +H
Sbjct: 515 ALY-EIEPENPATYITL-ANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWIEIKRQVHV 572
Query: 496 FVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
F+ GD+++ + S I++ LGE++ + +EGY PD + + +EE
Sbjct: 573 FLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEE 615
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 166/325 (51%), Gaps = 27/325 (8%)
Query: 113 ETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG- 171
+ P YS L++ C R G +VH AS + VFI L+++Y +CG
Sbjct: 82 DHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMY----AKCGS 137
Query: 172 VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQN 231
+ A++LFD+M R + SWN+++ GY K G ++ A K+FDEMP R+ SW ISG +
Sbjct: 138 LVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTH 197
Query: 232 GKSRQALSLFNEMRR-ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPV 290
+ R+AL LF M+R R ++ L +AL+A A I L+LGK IH Y+ + + V
Sbjct: 198 NQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRT-ELNLDEV 256
Query: 291 LVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALL------ 344
+ S AL+ +Y CG ++EA G+F +M+ R+ VSWT+MI + G +E L
Sbjct: 257 VWS---ALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLM 313
Query: 345 ---------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLM 395
TF GVL+AC+ G++ M + G P +V ++S+ G
Sbjct: 314 QSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYM-MHAGYDPGSFAISALVHMYSKCGNT 372
Query: 396 DEAFSLVQNMPMKPNDAVLGSLLLG 420
A + M +P+ SL++G
Sbjct: 373 RVARRVFNEM-HQPDLVSWTSLIVG 396
>gi|356545987|ref|XP_003541414.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 613
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 175/521 (33%), Positives = 282/521 (54%), Gaps = 27/521 (5%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
Q+H+ + +GF +++ LL Y G NA +VF+++ + +N +I G R+
Sbjct: 100 LQVHTHVFKSGFESNVFVVNALLQVYFVFGDARNACRVFDESPVRDSVSYNTVINGLVRA 159
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYC--SNVF 154
S+ ++ +M EPDEYT+ LLS C+ G VHG V C N
Sbjct: 160 GRAGCSMRIFAEMRGGFVEPDEYTFVALLSACSLLEDRGIGRVVHGLVYRKLGCFGENEL 219
Query: 155 IRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP 214
+ L+++Y G C R++ + V +W SL+ Y RG+++ A ++FD+M
Sbjct: 220 LVNALVDMYAKCG--CLEVAERVVRNGNGKSGVAAWTSLVSAYALRGEVEVARRLFDQMG 277
Query: 215 HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKW 274
R+VVSWT MISG G ++AL LF E+ + D+V +VAALSACA +G L+LG+
Sbjct: 278 ERDVVSWTAMISGYCHAGCFQEALELFVELEDLGMEPDEVVVVAALSACARLGALELGRR 337
Query: 275 IH-SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM--QRRNTVSWTSMIT 331
IH Y +++ G A++ MYA CG IE A VF K + T + S+++
Sbjct: 338 IHHKYDRDSWQCGHNR---GFTCAVVDMYAKCGSIEAALDVFLKTSDDMKTTFLYNSIMS 394
Query: 332 GFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIK 376
G A G + A+ +T++ +L AC H G VD G++ FE M +G+
Sbjct: 395 GLAHHGRGEHAMALFEEMRLVGLEPDEVTYVALLCACGHSGLVDHGKRLFESMLSEYGVN 454
Query: 377 PRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQK 436
P++EHYGCMVDL RAG ++EA+ L+QNMP K N + +LL C++ + ELA +Q+
Sbjct: 455 PQMEHYGCMVDLLGRAGHLNEAYLLIQNMPFKANAVIWRALLSACKVDGDVELARLASQE 514
Query: 437 LVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDF 496
L+A ++ + A Y+ L +N+ + + A+VR+ + +G++KPPG S V++NG LH F
Sbjct: 515 LLA-MENDHGARYVML-SNMLTLMDKHDEAASVRRAIDNVGIQKPPGWSHVEMNGTLHKF 572
Query: 497 VAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIE 537
+AGD ++ +A L +I M G+ +S++ ++
Sbjct: 573 LAGDKSHPEAKATEFMLRDIDMGLKSIGHSISVSKMVFDVD 613
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 210/466 (45%), Gaps = 93/466 (19%)
Query: 43 IIINGFSQKNYILAKLLAFYV--TSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPE 100
+++ G +++ L++F+ S L ++H +F + NP ++N +IR + S+TP
Sbjct: 1 MVVTGRHHDPFLMTPLISFFAAANSNALHHSHLLFTQIPNPDLFLFNLIIRAFSLSQTPH 60
Query: 101 KSVYLYKQMIDKETE--PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
++ LYK+M+ PD +T+ FLL CA+ L R G QVH V SG+ SNVF+
Sbjct: 61 NALSLYKKMLSSSPPIFPDTFTFPFLLKSCAKLSLPRLGLQVHTHVFKSGFESNVFVVNA 120
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
L+ +Y + G+ C +FD+ P R VS+N+++ G V+ G
Sbjct: 121 LLQVYFVF-GDARNACR--VFDESPVRDSVSYNTVINGLVRAGR---------------- 161
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
+GC ++ +F EMR V D+ VA LSAC+ + D +G+ +H
Sbjct: 162 -------AGC--------SMRIFAEMRGGFVEPDEYTFVALLSACSLLEDRGIGRVVHGL 206
Query: 279 VEENFSV-GREPVLVSLNNALIHMYASC-------------------------------- 305
V G +LV NAL+ MYA C
Sbjct: 207 VYRKLGCFGENELLV---NALVDMYAKCGCLEVAERVVRNGNGKSGVAAWTSLVSAYALR 263
Query: 306 GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF---------------LGVL 350
GE+E A +F +M R+ VSWT+MI+G+ G QEAL F + L
Sbjct: 264 GEVEVARRLFDQMGERDVVSWTAMISGYCHAGCFQEALELFVELEDLGMEPDEVVVVAAL 323
Query: 351 SACSHGGFVDEGRQFFECMNQN-WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKP 409
SAC+ G ++ GR+ +++ W +VD++++ G ++ A +
Sbjct: 324 SACARLGALELGRRIHHKYDRDSWQCGHNRGFTCAVVDMYAKCGSIEAALDVFLKTSDDM 383
Query: 410 NDAVL-GSLLLGCRIHNNAELASQVAQKL-VAEIDPEQAAGYLALV 453
L S++ G H E A + +++ + ++P++ Y+AL+
Sbjct: 384 KTTFLYNSIMSGLAHHGRGEHAMALFEEMRLVGLEPDEVT-YVALL 428
>gi|414885893|tpg|DAA61907.1| TPA: hypothetical protein ZEAMMB73_945776 [Zea mays]
Length = 584
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 173/460 (37%), Positives = 261/460 (56%), Gaps = 28/460 (6%)
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGY-CSNVFIR 156
P ++ L+ ++ +PD Y + CAR Q+H G S+ +R
Sbjct: 55 NPHLALRLFDHLLRSGADPDPAAYELAFASCARARDRATAAQLHAHAAKRGLVASHRRVR 114
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRG-DIDGAWKIFDEMPH 215
L++ Y + G + AR +FD +V+WN LL+GY + G D D F MP
Sbjct: 115 CRLVHAYAVCGM---LPHARRVFDGGTDNDMVAWNCLLRGYAQEGGDEDLLRDFFARMPS 171
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR-VGLDQVALVAALSACAEIGDLKLGKW 274
R+ VSW T++S C NG+ +A+++F EM ++ D+V LV+ +SA A +G L G W
Sbjct: 172 RDSVSWNTVLSWCVVNGEYDEAIAVFREMLASQECQPDRVTLVSVVSAIAYLGALAHGLW 231
Query: 275 IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGF 333
H+YV E L++ALI+MY+ CG IE A VF + +R+ +W +M+ GF
Sbjct: 232 AHAYVFRKCIEVEE----KLSSALINMYSKCGFIEGAVYVFDNVGGKRSLDTWNAMLAGF 287
Query: 334 AKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
GY++ AL +TF VL+ACSHGG V+EG ++F+ M++ +GI+P
Sbjct: 288 TANGYSERALELFTRMESTRLMPNKITFNTVLNACSHGGLVEEGMKYFQRMSRFYGIEPD 347
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
I HYGCMVDLF RAG+ ++A ++Q MPM+P+ ++L +LL CR H N EL +V +L+
Sbjct: 348 IAHYGCMVDLFCRAGMFEKAEEIIQTMPMEPDASMLKALLGACRTHKNLELGKKVGHRLI 407
Query: 439 AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVA 498
E AGY+ L++N+YA W V VR+ M+ GV K PG S V++NGV+H+F++
Sbjct: 408 -EAAANDHAGYV-LLSNIYALDGNWGGVHKVRKLMLDRGVLKTPGSSSVELNGVIHEFIS 465
Query: 499 GDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
GD ++ + IYK LGEI Q GY PD S++ L I++
Sbjct: 466 GDKSHSRKRDIYKMLGEICQQLKSSGYTPDTSQVLLDIDD 505
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 128/302 (42%), Gaps = 10/302 (3%)
Query: 38 QIHSQIIINGF-SQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
Q+H+ G + + +L+ Y G L +A +VF+ + WN ++RG+A+
Sbjct: 96 QLHAHAAKRGLVASHRRVRCRLVHAYAVCGMLPHARRVFDGGTDNDMVAWNCLLRGYAQE 155
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYC--SNVF 154
E L + + D +++ +LS C G + E V +LAS C V
Sbjct: 156 GGDED---LLRDFFARMPSRDSVSWNTVLSWCVVNGEYDEAIAVFREMLASQECQPDRVT 212
Query: 155 IRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM- 213
+ + + + + G+ +F ++L+ Y K G I+GA +FD +
Sbjct: 213 LVSVVSAIAYLGALAHGLWAHAYVFRKCIEVEEKLSSALINMYSKCGFIEGAVYVFDNVG 272
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK 273
R++ +W M++G NG S +AL LF M R+ +++ L+AC+ G ++ G
Sbjct: 273 GKRSLDTWNAMLAGFTANGYSERALELFTRMESTRLMPNKITFNTVLNACSHGGLVEEGM 332
Query: 274 WIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF 333
+ + + EP + ++ ++ G E+A + + M S + G
Sbjct: 333 KYFQRMSRFYGI--EPDIAHY-GCMVDLFCRAGMFEKAEEIIQTMPMEPDASMLKALLGA 389
Query: 334 AK 335
+
Sbjct: 390 CR 391
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 183/521 (35%), Positives = 272/521 (52%), Gaps = 62/521 (11%)
Query: 36 LFQIHSQIIINGFSQKNYILAKLLAFYVTSG--YLINAHKVFEKTENPSTAIWNQMIRGH 93
++++H++++ G L +LL S L A +F+ P T +N +IR H
Sbjct: 4 IYKLHARLLKTGHHNHPLALRRLLLSCAASAPASLSYARSIFDLIAFPDTFAFNTIIRAH 63
Query: 94 ARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNV 153
A S K M PD +T+ F+L CAR + G +H + G+ S+V
Sbjct: 64 ADSSPSFSLSLFSK-MAMAGVSPDHFTFPFVLKACAR---LQTGLDLHSLLFKLGFDSDV 119
Query: 154 FIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
+++ L++ Y GC G +D A K+F+EM
Sbjct: 120 YVQNGLIHFY---------GCC-------------------------GFLDFALKVFEEM 145
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR-ARVGLDQVALVAALSACAEIGDLKLG 272
P R++VSW++MI+ A+NG +AL+LF M+ V D+V +++ +SA + +GDL+LG
Sbjct: 146 PERDLVSWSSMIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELG 205
Query: 273 KWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
KWI ++ N G E VSL AL+ M++ CG IEE+ VF +M RN ++WT++I G
Sbjct: 206 KWIRGFISRN---GLE-FTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALING 261
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
A G + EAL +TF GVL ACSHGG V EG FE + +G++P
Sbjct: 262 LAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEP 321
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
EHYGCMVDL RAGL++EA V MP++PN + +LL C HN ELA +V +K
Sbjct: 322 LPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNHNYIELAEKVKEK- 380
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
+ E+D Y+ L++NVY RW + A VR M + + K PG S + +N ++H+FV
Sbjct: 381 INELDSYHDGDYV-LLSNVYGGVGRWAEKAGVRNSMREKRISKKPGCSLINVNHLIHEFV 439
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
AGD+ + Q I + L + GY PDIS + IEE
Sbjct: 440 AGDNNHPQFESIREFLVSMIDSLKVVGYTPDISNVLFDIEE 480
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 131/312 (41%), Gaps = 41/312 (13%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGH 93
+T +HS + GF Y+ L+ FY G+L A KVFE+ W+ MI
Sbjct: 101 QTGLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKVFEEMPERDLVSWSSMIACF 160
Query: 94 ARSETPEKSVYLYKQM-IDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSN 152
A++ +++ L+++M + +PDE ++S + G G+ + G + +G
Sbjct: 161 AKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFT 220
Query: 153 VFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFD 211
V + T L++++ CG + + +FD+M R+V++W +L
Sbjct: 221 VSLGTALVDMF----SRCGCIEESMRVFDEMGERNVLTWTAL------------------ 258
Query: 212 EMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKL 271
I+G A +G+S +AL +F EMR D V L AC+ G +
Sbjct: 259 -------------INGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHGGLVSE 305
Query: 272 GKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMI 330
G + + + G EP L ++ + G + EA M R N++ W +++
Sbjct: 306 GWHVFESIRNEY--GMEP-LPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLL 362
Query: 331 TGFAKQGYAQEA 342
Y + A
Sbjct: 363 GACVNHNYIELA 374
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 175/519 (33%), Positives = 281/519 (54%), Gaps = 25/519 (4%)
Query: 32 TTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIR 91
++T Q+H+ + + YI L+ Y A KVF+ + WN +I
Sbjct: 162 ASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLIT 221
Query: 92 GHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASG-YC 150
+ ++ ++++ L+ +M+ PDE T + ++S CA REG QVH R++ S +
Sbjct: 222 CYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFR 281
Query: 151 SNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKI 209
++ + L+++Y +CG A+ +FD M RSVVS S++ GY K ++ A +
Sbjct: 282 EDMVLNNALVDMY----AKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAV 337
Query: 210 FDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDL 269
F +M +NVV+W +I+ A N + +AL LF ++R V L+ACA + +L
Sbjct: 338 FLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANL 397
Query: 270 KLGKWIHSYV-EENFSVGREP-VLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
+LG+ H +V +E F P V + N+L+ MY G I + VF +M R+ VSW
Sbjct: 398 QLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDNVSWN 457
Query: 328 SMITGFAKQGYAQEALLTF---------------LGVLSACSHGGFVDEGRQFFECMNQN 372
+MI G+A+ G A++ALL F +GVLSAC H G V EGR++F+ M ++
Sbjct: 458 AMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGRRYFQSMTED 517
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQ 432
GI P +HY CM+DL RAG + E L++NMPM+P+ + SLL CR+H N ++
Sbjct: 518 HGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEPDAVLWASLLGACRLHKNIDMGEW 577
Query: 433 VAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGV 492
A KL E+DP+ + Y+ L++N+YA +W DV VR+ M GV K PG SW++I
Sbjct: 578 AAGKLF-ELDPDNSGPYV-LLSNMYAELGKWADVFRVRRSMKHRGVSKQPGCSWIEIGRK 635
Query: 493 LHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISE 531
++ F+A D+ + + I+ TL I MQ + +I++
Sbjct: 636 VNVFLARDNIHPCRNEIHDTLRIIQMQMSRMSIDAEIAD 674
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 153/336 (45%), Gaps = 78/336 (23%)
Query: 48 FSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYK 107
F+ + ++L LL+ Y G L +A +VF+ + +T +N ++ AR + ++ L+
Sbjct: 46 FAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFG 105
Query: 108 QMIDKETEPDE-----------------------------------YTYSFLLSVCARCG 132
+ D PD+ Y+++ LS CA
Sbjct: 106 AIPD----PDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEK 161
Query: 133 LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWN 191
R GEQVH V S + S+V+I T L+++Y +C A+ +FD MP R++VSWN
Sbjct: 162 ASRTGEQVHALVTKSSHGSDVYIGTALVDMY----AKCERPEEAQKVFDAMPERNIVSWN 217
Query: 192 SLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL 251
SL+ Y + G +D +AL+LF M +
Sbjct: 218 SLITCYEQNGPVD-------------------------------EALALFVRMMKDGFVP 246
Query: 252 DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEA 311
D+V L + +SACA + + G+ +H+ + ++ + V LNNAL+ MYA CG EA
Sbjct: 247 DEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMV---LNNALVDMYAKCGRTWEA 303
Query: 312 YGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFL 347
VF +M R+ VS TSMITG+AK +A FL
Sbjct: 304 KCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFL 339
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 130/277 (46%), Gaps = 22/277 (7%)
Query: 147 SGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGA 206
S + F+ L++ Y G + AR +FD MP R+ S+N+LL + G D A
Sbjct: 44 SPFAGETFLLNTLLSAYARLGS---LHDARRVFDGMPHRNTFSYNALLSACARLGRADDA 100
Query: 207 WKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEI 266
+F +P + S+ +++ AQ+G+ AL M L+ + +ALSACA
Sbjct: 101 LALFGAIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASE 160
Query: 267 GDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSW 326
+ G+ +H+ V ++ S G + V + AL+ MYA C EEA VF M RN VSW
Sbjct: 161 KASRTGEQVHALVTKS-SHGSD---VYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSW 216
Query: 327 TSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQ 371
S+IT + + G EAL +T V+SAC+ EGRQ M +
Sbjct: 217 NSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVK 276
Query: 372 NWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
+ + + +VD++++ G EA + M ++
Sbjct: 277 SDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIR 313
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 178/543 (32%), Positives = 279/543 (51%), Gaps = 57/543 (10%)
Query: 2 LVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAF 61
L E+I A S +T LL T + +IH II NG S ++ + L+
Sbjct: 336 LFHEMISARMKPDS--ITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDI 393
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
Y + A K+F++ + MI G+ + ++ +++ ++ + + T
Sbjct: 394 YFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTL 453
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDD 181
+ +L CA G+++HG +L +G+ GG C VG A
Sbjct: 454 ASVLPACAGLAALTLGKELHGHILKNGH-----------------GGSCYVGSA------ 490
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
++ Y K G +D A + F + ++ V W +MI+ C+QNGK +A+ LF
Sbjct: 491 -----------IMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLF 539
Query: 242 NEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHM 301
+M A D V++ AALSACA + L GK IH+++ R + +ALI M
Sbjct: 540 RQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMR--GAFRSDLFAE--SALIDM 595
Query: 302 YASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTF 346
Y+ CG ++ A VF M+ +N VSW S+I + G +++L +TF
Sbjct: 596 YSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTF 655
Query: 347 LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP 406
L ++SAC H G VDEG +F CM + GI R+EHY CMVDLF RAG ++EAF ++ +MP
Sbjct: 656 LAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMP 715
Query: 407 MKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDV 466
P+ V G+LL CR+H N ELA +VA + + ++DP Q +GY L++NV+A A +W+ V
Sbjct: 716 FSPDAGVWGTLLGACRLHGNVELA-EVASRNLFDLDP-QNSGYYVLLSNVHANAGQWESV 773
Query: 467 AAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYK 526
+R M + GV+K PG SW+ +N H FVA D ++ Q+S IY L + ++ +EGY
Sbjct: 774 LKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIYLLLKNLFLELRKEGYV 833
Query: 527 PDI 529
P +
Sbjct: 834 PQL 836
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 169/396 (42%), Gaps = 66/396 (16%)
Query: 22 QIFSLLQIRNTTKTLFQ---IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKT 78
Q+ S+LQ L Q H+Q+++NG + KLL YV G ++A +F +
Sbjct: 48 QLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQL 107
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE 138
+ WN MIRG + ++ Y +M+ T PD+YT+ +++ C G
Sbjct: 108 RLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGR 167
Query: 139 QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYV 198
VH ++ G+ +VF+ ++L+ Y +G C + AR LFD MP++ V WN +L GYV
Sbjct: 168 VVHDKIQFMGFELDVFVGSSLIKFYSENG--C-IHDARYLFDRMPSKDGVLWNVMLNGYV 224
Query: 199 KRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVA 258
K GD D A + F EMRR + V
Sbjct: 225 KNGDWDNATGV-------------------------------FMEMRRTETNPNSVTFAC 253
Query: 259 ALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM 318
LS CA + G +H V + PV N L+ MYA CG + +A +F M
Sbjct: 254 VLSVCASEIMINFGSQLHGLVVSSGLEMDSPVA----NTLLAMYAKCGHLFDARRLFDMM 309
Query: 319 QRRNTVSWTSMITGFAKQGYAQEA---------------LLTFLGVLSACSHGGFVDEGR 363
+ + V+W MI+G+ + G+ EA +TF L S G + +G+
Sbjct: 310 PKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGK 369
Query: 364 QFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAF 399
+ I I G +D+F ++ L+D F
Sbjct: 370 E----------IHCYIIRNGVSLDVFLKSALIDIYF 395
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/458 (22%), Positives = 209/458 (45%), Gaps = 59/458 (12%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H ++ +G + + LLA Y G+L +A ++F+ WN MI G+ ++
Sbjct: 269 QLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNG 328
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ L+ +MI +PD T+S L + + R+G+++H ++ +G +VF+++
Sbjct: 329 FMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKS 388
Query: 158 NLMNLYLMSGGEC-GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L+++Y +C V AR +FD +V +++ GYV
Sbjct: 389 ALIDIYF----KCRDVEMARKIFDQRTPVDIVVCTAMISGYV------------------ 426
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
NG + AL +F + + R+ + V L + L ACA + L LGK +H
Sbjct: 427 -------------LNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELH 473
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
++ +N G + +A++ MYA CG ++ A+ F + ++ V W SMIT ++
Sbjct: 474 GHILKNGHGGS----CYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQN 529
Query: 337 GYAQEALLTF--LGV-------------LSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G +EA+ F +G+ LSAC++ + G++ M + + +
Sbjct: 530 GKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRG-AFRSDLFA 588
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE- 440
++D++S+ G +D A + M K N+ S++ H + + + ++ +
Sbjct: 589 ESALIDMYSKCGNLDLACRVFDTMEEK-NEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDG 647
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
I P+ +LA+++ A + + + R ++G+
Sbjct: 648 IQPDHVT-FLAIISACGHAGQVDEGIHYFRCMTEELGI 684
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 184/588 (31%), Positives = 302/588 (51%), Gaps = 83/588 (14%)
Query: 27 LQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKTENPSTA 84
LQ T + Q+H+ I + ++LLA Y L AH +F+ + P+
Sbjct: 22 LQNCGTEREANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLV 81
Query: 85 IWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRV 144
WN +I+ + ++ ++ L+ +++ + PD +T +L CAR G +EG+Q+HG V
Sbjct: 82 SWNLLIKCYIENQRSNDAIALFCKLL-CDFVPDSFTLPCVLKGCARLGALQEGKQIHGLV 140
Query: 145 LASGY----------------------CSNVFIRTNLMNLY----LMSG-GECG------ 171
L G+ C VF R ++ L+ G CG
Sbjct: 141 LKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELAL 200
Query: 172 --------------------------VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDG 205
+ AR +FD MP R+ VSWN+++ GY+K GD +
Sbjct: 201 EMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSWNAMINGYMKAGDSNT 260
Query: 206 AWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAE 265
A ++FD+MP R++V+W +MI+G +N + +AL LF M R + + ++ A+SA +
Sbjct: 261 AKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAASG 320
Query: 266 IGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVS 325
+ L G+W+HSY+ ++ + VL +L LI MY+ CG ++ A VFR + ++
Sbjct: 321 MVSLGTGRWVHSYIVKS-GFKTDGVLGTL---LIEMYSKCGSVKSALRVFRSIPKKKLGH 376
Query: 326 WTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMN 370
WTS+I G G ++ L +TF+GVL+ACSH GF ++ ++F+ M
Sbjct: 377 WTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMT 436
Query: 371 QNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELA 430
++GIKP IEHYGC++D+ RAG ++EA ++ MP+K N + SLL G R H N +
Sbjct: 437 YDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNIRMG 496
Query: 431 SQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQIN 490
AQ L+ ++ P+ Y+ L +N+YAAA W+ V VR+ M K G++K PG S ++
Sbjct: 497 EYAAQHLI-DLAPDTTGCYVIL-SNMYAAAGLWEKVRQVREMMKKKGMKKDPGCSSIEHQ 554
Query: 491 GVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
G +H+F+ GD ++ Q IY L E+ + G+ PD +++ L +EE
Sbjct: 555 GSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEE 602
>gi|297821463|ref|XP_002878614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324453|gb|EFH54873.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 161/471 (34%), Positives = 267/471 (56%), Gaps = 44/471 (9%)
Query: 59 LAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDE 118
+ + + G + NA KVF+++ WN +I G+ + EK++ +YK M + +PD+
Sbjct: 123 IHMFASCGEMENARKVFDESPVRDLVSWNCLINGYKKIGEGEKAIEVYKVMESEGVKPDD 182
Query: 119 YTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARL 177
T L+S CA G G++ + V A+G + + LM+++ +CG + AR
Sbjct: 183 VTMIGLVSSCAMLGDLNRGKEFYEYVKANGLRMTIPLANALMDMF----SKCGDIHEARR 238
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
+FD++ R++VS K+FD+M ++VV W MI G Q +S+ A
Sbjct: 239 IFDNLEKRTIVS------------------KLFDDMEEKDVVMWNAMIGGSVQAKRSQDA 280
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
L+LF EM+ + D++ ++ LSAC+++G L +G WIH Y+E++ + V+L +
Sbjct: 281 LALFQEMQTSNTDPDEITMIHCLSACSQLGALDVGIWIHRYIEKH----SLSLNVALGTS 336
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------------- 343
L+ MYA CG I EA VF +Q RN++++T++I G A G A A+
Sbjct: 337 LVDMYAKCGNISEALCVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPD 396
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
+TF+G+LSAC HGG + GR +F M + + P+++HY MVDL RAGL++EA L+
Sbjct: 397 EITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADKLM 456
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKR 462
++MPM+ + AV G+LL GCR+H N +L + A+KL+ E+DP + Y+ L+ +Y A
Sbjct: 457 ESMPMEADAAVWGALLFGCRMHGNVKLGEKAAKKLL-ELDPSDSGIYV-LLDGMYGEANM 514
Query: 463 WQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTL 513
W+D R+ M + GV K PG S +++NG++ +F+ D + ++ IY L
Sbjct: 515 WEDAKRARRMMNERGVEKIPGCSSIEVNGIVSEFIVRDKSRPESEKIYDCL 565
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 196/438 (44%), Gaps = 76/438 (17%)
Query: 43 IIINGFSQKNYILAKLLAFYV--TSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPE 100
++I G + ++L+AF S YL K+ + ENP+ WN IRG + SE P+
Sbjct: 1 MVITGLVLDPFASSRLIAFCALSESRYLNYCVKILKGIENPNAFSWNVTIRGFSESENPK 60
Query: 101 KSVYLYKQMIDK---ETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+V YKQM+ + E+ PD +TY L VCA L G + G V + + +
Sbjct: 61 DAVLAYKQMLRRGCCESRPDHFTYPVLFKVCADLRLNSLGHMILGHVFK----LRLELVS 116
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
++ N + CG + AR +FD+ P R +VSWN L+ GY K G+
Sbjct: 117 HVHNASIHMFASCGEMENARKVFDESPVRDLVSWNCLINGYKKIGE-------------- 162
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
+A+ ++ M V D V ++ +S+CA +GDL GK +
Sbjct: 163 -----------------GEKAIEVYKVMESEGVKPDDVTMIGLVSSCAMLGDLNRGKEFY 205
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVS----------- 325
YV+ N + + L NAL+ M++ CG+I EA +F +++R VS
Sbjct: 206 EYVKAN----GLRMTIPLANALMDMFSKCGDIHEARRIFDNLEKRTIVSKLFDDMEEKDV 261
Query: 326 --WTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFEC 368
W +MI G + +Q+AL +T + LSACS G +D G
Sbjct: 262 VMWNAMIGGSVQAKRSQDALALFQEMQTSNTDPDEITMIHCLSACSQLGALDVGIWIHRY 321
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAE 428
+ ++ + + +VD++++ G + EA + + + N +++ G +H +A
Sbjct: 322 IEKH-SLSLNVALGTSLVDMYAKCGNISEALCVFHGIQTR-NSLTYTAIIGGLALHGDAS 379
Query: 429 LASQVAQKLV-AEIDPEQ 445
A +++ A I P++
Sbjct: 380 TAISYFNEMIDAGIAPDE 397
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 128/284 (45%), Gaps = 47/284 (16%)
Query: 208 KIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR---ARVGLDQVALVAALSACA 264
KI + + N SW I G +++ + A+ + +M R D CA
Sbjct: 33 KILKGIENPNAFSWNVTIRGFSESENPKDAVLAYKQMLRRGCCESRPDHFTYPVLFKVCA 92
Query: 265 EIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTV 324
DL+L H + F + R ++ ++NA IHM+ASCGE+E A VF + R+ V
Sbjct: 93 ---DLRLNSLGHMILGHVFKL-RLELVSHVHNASIHMFASCGEMENARKVFDESPVRDLV 148
Query: 325 SWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECM 369
SW +I G+ K G ++A+ +T +G++S+C+ G ++ G++F+E +
Sbjct: 149 SWNCLINGYKKIGEGEKAIEVYKVMESEGVKPDDVTMIGLVSSCAMLGDLNRGKEFYEYV 208
Query: 370 NQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAEL 429
N G++ I ++D+FS+ G + EA + N+ +
Sbjct: 209 KAN-GLRMTIPLANALMDMFSKCGDIHEARRIFDNLEKR--------------------- 246
Query: 430 ASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKM 473
+ KL +++ + + A++ AKR QD A+ Q+M
Sbjct: 247 --TIVSKLFDDMEEKDVVMWNAMIGG-SVQAKRSQDALALFQEM 287
Score = 42.0 bits (97), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
IH I + S + L+ Y G + A VF + ++ + +I G A
Sbjct: 318 IHRYIEKHSLSLNVALGTSLVDMYAKCGNISEALCVFHGIQTRNSLTYTAIIGGLALHGD 377
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
++ + +MID PDE T+ LLS C G+ + G
Sbjct: 378 ASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRD 418
>gi|218186152|gb|EEC68579.1| hypothetical protein OsI_36919 [Oryza sativa Indica Group]
Length = 586
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 174/519 (33%), Positives = 282/519 (54%), Gaps = 30/519 (5%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H++I+ G + A L++ Y S L +A +F++T I++ ++ + S +
Sbjct: 1 MHARILKEGLAHHPPNPAALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAISHSAS 60
Query: 99 PEKSVYLYKQMIDKET-EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
PE ++ + + M+ + PD + S + SV AR R G Q+H +AS Y + +++
Sbjct: 61 PELALPILRCMLSADALHPDHFVISSVASVFARLRSRRLGRQLHAHFVASPYNGDDVVKS 120
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
+L+++Y G R +FD M A++ V W +L+ GY G + A ++F MP RN
Sbjct: 121 SLVDMYCKCGSPDD---GRKVFDSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRN 177
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQV-ALVAALSACAEIGDLKLGKWIH 276
+ +WT +ISG G+S A+ LF EMRR V +D L + A A++ LG+ +H
Sbjct: 178 LFAWTALISGLVNTGESVGAVELFVEMRRDGVRIDDAFVLSIVIGASADLAAFVLGRQLH 237
Query: 277 SYVEENFSVGREPVLVSL--NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
S R L ++ NALI MY+ C +I A VF + R+ +SWT+M+ G A
Sbjct: 238 G------SAMRLGFLSNMIVGNALIDMYSKCSDILSAREVFEGITFRDVISWTTMVVGEA 291
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
+ G A+EAL +TF+G++ ACSH G V +GRQ FE M +GI PR+
Sbjct: 292 QHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRL 351
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
+HY C +DL SR+G + EA L+ MP +P++A G+LL C + +AE+ +++ KL+
Sbjct: 352 QHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATWGALLSACTKYKDAEMCIRISDKLL- 410
Query: 440 EIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG 499
E+ P+ ++ Y+ L++NVYA +W VA VR+ MI + +RK PG SW++ F AG
Sbjct: 411 ELRPKDSSTYI-LLSNVYAVNGKWDSVAKVRKCMIGLEIRKEPGYSWIEAGREFRLFHAG 469
Query: 500 DSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ I L E+ ++ + GY PD S + +EE
Sbjct: 470 EVPLDVREEIMVFLEEMVLEMRKRGYVPDTSSVMHDLEE 508
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 111/261 (42%), Gaps = 44/261 (16%)
Query: 22 QIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENP 81
+F+ L+ R + Q+H+ + + ++ + + + L+ Y G + KVF+
Sbjct: 89 SVFARLRSRRLGR---QLHAHFVASPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAK 145
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMI------------------------------- 110
++ +W ++ G+A + E+++ L++ M
Sbjct: 146 NSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMR 205
Query: 111 -DKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGE 169
D D + S ++ A F G Q+HG + G+ SN+ + L+++Y +
Sbjct: 206 RDGVRIDDAFVLSIVIGASADLAAFVLGRQLHGSAMRLGFLSNMIVGNALIDMY----SK 261
Query: 170 CG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM----PHRNVVSWTTM 224
C + AR +F+ + R V+SW +++ G + G + A ++D M N V++ +
Sbjct: 262 CSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGL 321
Query: 225 ISGCAQNGKSRQALSLFNEMR 245
I C+ G ++ LF M+
Sbjct: 322 IYACSHAGLVQKGRQLFESMK 342
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 8/201 (3%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H + GF + L+ Y +++A +VFE W M+ G A+
Sbjct: 235 QLHGSAMRLGFLSNMIVGNALIDMYSKCSDILSAREVFEGITFRDVISWTTMVVGEAQHG 294
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLAS-GYCSNVFIR 156
E+++ LY +M+ +P+E T+ L+ C+ GL ++G Q+ + G +
Sbjct: 295 RAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHY 354
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPAR-SVVSWNSLLKGYVKRGDIDGAWKIFD---E 212
T ++L SG A L MP +W +LL K D + +I D E
Sbjct: 355 TCYLDLLSRSGHLLE---AEELMTTMPYEPDEATWGALLSACTKYKDAEMCIRISDKLLE 411
Query: 213 MPHRNVVSWTTMISGCAQNGK 233
+ ++ ++ + + A NGK
Sbjct: 412 LRPKDSSTYILLSNVYAVNGK 432
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 175/528 (33%), Positives = 279/528 (52%), Gaps = 68/528 (12%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q H Q +I GF ++ + L+ Y G L +A +F++ + + W MI G+ +++
Sbjct: 173 QAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQND 232
Query: 98 TPEKSVYLYKQMI--------DKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGY 149
+++ L+K+ + D E D +LS C+R E VHG ++ G+
Sbjct: 233 DAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGF 292
Query: 150 CSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWK 208
++ + LM+ Y +CG +G +R +FD M R V+SWNS++ Y
Sbjct: 293 EGDLGVENTLMDAY----AKCGELGVSRRVFDGMAERDVISWNSIIAVY----------- 337
Query: 209 IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM-RRARVGLDQVALVAALSACAEIG 267
AQNG S +++ +F+ M + + + V L A L ACA G
Sbjct: 338 --------------------AQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSG 377
Query: 268 DLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
+LGK IH V +G E V + ++I MY CG++E A F +M+ +N SW+
Sbjct: 378 SQRLGKCIHDQV---IKMGLESN-VFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWS 433
Query: 328 SMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQN 372
+M+ G+ G+A+EAL +TF+ VL+ACSH G ++EG +F+ M+
Sbjct: 434 AMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHE 493
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQ 432
+ ++P +EHYGCMVDL RAG + EAF L++ M ++P+ V G+LL CR+H N +L
Sbjct: 494 FDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEI 553
Query: 433 VAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGV 492
A+KL E+DP+ GY L++N+YA A RW+DV +R M G+ KPPG S V I G
Sbjct: 554 SARKLF-ELDPKN-CGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGR 611
Query: 493 LHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELF--LGIEE 538
+H F+ GD + Q IY+ L +++M+ + GY PD++ + +G EE
Sbjct: 612 VHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEE 659
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 206/456 (45%), Gaps = 63/456 (13%)
Query: 27 LQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI- 85
+QI +F H+ +GFS++ I A + S N +F K + +
Sbjct: 61 VQITAQHFLIFPEHTAFQFSGFSKRRSICAGAVLRRRYSNN-PNLTTLFNKYVDKTNVFS 119
Query: 86 WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVL 145
WN +I ARS +++ + M +P+ T+ + C+ G Q H + L
Sbjct: 120 WNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQAL 179
Query: 146 ASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDID 204
G+ ++F+ + L+++Y +CG + AR LFD++ R++VSW S++ GYV+ D
Sbjct: 180 IFGFEPDLFVSSALVDMY----SKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAH 235
Query: 205 GAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACA 264
A +F E + SG +G+ V +D +A+V+ LSAC+
Sbjct: 236 RALLLFKE--------FLVEESGSEGDGE---------------VCVDPIAMVSVLSACS 272
Query: 265 EIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTV 324
+ + + + +H ++ + G + + N L+ YA CGE+ + VF M R+ +
Sbjct: 273 RVSEKSITEGVHGFLIKRGFEGD----LGVENTLMDAYAKCGELGVSRRVFDGMAERDVI 328
Query: 325 SWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFEC 368
SW S+I +A+ G + E++ +T VL AC+H G ++ +C
Sbjct: 329 SWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSG----SQRLGKC 384
Query: 369 MNQ---NWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHN 425
++ G++ + ++D++ + G ++ A M K N +++ G +H
Sbjct: 385 IHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREK-NVKSWSAMVAGYGMHG 443
Query: 426 NAELASQVAQKL-VAEIDPEQAAGYLALVANVYAAA 460
+A+ A +V ++ +A + P Y+ V+ + A +
Sbjct: 444 HAKEALEVFYEMNMAGVKP----NYITFVSVLAACS 475
>gi|242052493|ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
gi|241927367|gb|EES00512.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
Length = 506
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 159/418 (38%), Positives = 247/418 (59%), Gaps = 25/418 (5%)
Query: 137 GEQVHGRVLASGY-CSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLK 195
G Q+H +L +G+ S+ + +L+ LY V AR +F +M R VV+WN ++
Sbjct: 97 GPQLHSLLLRTGHVASDTHVSASLVQLYCTCRH---VADARSVFHEMAVRDVVAWNVMIA 153
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVA 255
GYVK GD+ A ++FD MP RNVVSWTT+I G AQ + +A+ +F M+ + D VA
Sbjct: 154 GYVKAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPDGVA 213
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
L++ LSAC ++G + LG+W+H +V + +E + L N++I MY CG IE+A VF
Sbjct: 214 LLSVLSACGDLGAVDLGEWVHRFVVRR-GLRQE---IPLMNSIIDMYMKCGCIEKAVEVF 269
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVD 360
M+ ++ V+WT++I GFA G +A+ +TFL +LSACSH G D
Sbjct: 270 EGMEEKSVVTWTTLIAGFALHGLGLQAVEMFRRMERENMAPNDVTFLAILSACSHVGLTD 329
Query: 361 EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
GR +F M + IKP++EHYGCMVDL RAG + EA LV++MP+K N A+ G+LL
Sbjct: 330 LGRWYFNIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLAA 389
Query: 421 CRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRK 480
R H +A+L + L+ E++P + Y+ L++N++A +RW DV+ +R+ M + G+R
Sbjct: 390 SRTHGDADLGEEALVHLI-ELEPSNSGNYI-LLSNIFAEQERWDDVSKLRKAMKERGLRN 447
Query: 481 PPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
PG S ++++G++H+F + D ++ I + L EI G+ E+ IEE
Sbjct: 448 VPGASSIEVDGMVHEFTSRDGSHPFLHKICEVLCEINTNMKSVGFASVFPEVLHAIEE 505
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 134/295 (45%), Gaps = 43/295 (14%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
++A YV +G L +A ++F+ + W +I G+A+ PE++V ++++M + EPD
Sbjct: 151 MIAGYVKAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPD 210
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCAR 176
+LS C G GE VH V+ G + + +++++Y+ +CG + A
Sbjct: 211 GVALLSVLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYM----KCGCIEKAV 266
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
+F+ M +SVV+W +L+ G+ A +G Q
Sbjct: 267 EVFEGMEEKSVVTWTTLIAGF-------------------------------ALHGLGLQ 295
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
A+ +F M R + + V +A LSAC+ +G LG+W + + + + + V
Sbjct: 296 AVEMFRRMERENMAPNDVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPQ---VEHYG 352
Query: 297 ALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQGYA---QEALLTFL 347
++ + G ++EA + + M + N W +++ G A +EAL+ +
Sbjct: 353 CMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLAASRTHGDADLGEEALVHLI 407
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 165/497 (33%), Positives = 265/497 (53%), Gaps = 55/497 (11%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
L+ Y + GY+ +A K+F++ WN MI G+A + ++++ L+K+M+ PD
Sbjct: 160 LITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPD 219
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
E T ++S CA+ G QVH + G+ SN+ I L++LY
Sbjct: 220 ESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLY-------------- 265
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
+K G+++ A +F+ + +++V+SW T+I G ++A
Sbjct: 266 --------------------IKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEA 305
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFS-VGREPVLVSLNN 296
L LF EM R+ + V +++ L ACA +G +++G+WIH Y+ + V S
Sbjct: 306 LLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANAS---SHRT 362
Query: 297 ALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------- 343
+LI MYA CG+IE A VF + R+ SW +MI GFA G A A
Sbjct: 363 SLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEP 422
Query: 344 --LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
+TF+G+LSACSH G +D GR F M +++ I P++EHYGCM+DL +GL EA +
Sbjct: 423 DDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEM 482
Query: 402 VQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAK 461
+ M M+P+ + SLL C++H N EL AQ L+ +I+P+ Y+ L++N+YA A
Sbjct: 483 INTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLI-KIEPKNPGSYV-LLSNIYATAG 540
Query: 462 RWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAM 521
RW +VA +R + G++K PG S ++I+ V+H+F+ GD + + IY L E+ +
Sbjct: 541 RWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLE 600
Query: 522 QEGYKPDISELFLGIEE 538
+ G+ PD SE+ +EE
Sbjct: 601 EAGFVPDTSEVLQEMEE 617
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 151/434 (34%), Positives = 243/434 (55%), Gaps = 34/434 (7%)
Query: 35 TLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY---LINAHKVFEKTENPSTAIWNQMIR 91
+L IH+Q+I G NY L+KL+ F V S + L A VFE + P+ IWN M R
Sbjct: 2 SLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFR 61
Query: 92 GHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCS 151
GHA S P ++YLY MI P+ YT+ FLL CA+ FREG+Q+HG VL GY
Sbjct: 62 GHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDL 121
Query: 152 NVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFD 211
++++ T+L+++Y+ +G + AR +FD R VVS+ +L+ GY +G I A K+FD
Sbjct: 122 DLYVHTSLISMYVQNGR---LEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFD 178
Query: 212 EMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKL 271
E+P ++VVSW MISG A+ G +++AL LF EM + V D+ +V+ +SACA+ ++L
Sbjct: 179 EIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIEL 238
Query: 272 GKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMIT 331
G+ +HS+++++ G +V NALI +Y CGE+E A G+F + ++ +SW ++I
Sbjct: 239 GRQVHSWIDDH-GFGSNLKIV---NALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIG 294
Query: 332 GFAKQGYAQEALLTF---------------LGVLSACSHGGFVDEGRQFFECMNQNW-GI 375
G+ +EALL F L +L AC+H G ++ GR +N+ G+
Sbjct: 295 GYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGV 354
Query: 376 KPRIEHYGCMVDLFSRAGLMDEA---FSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQ 432
H ++D++++ G ++ A F + N + +A ++ G +H A A
Sbjct: 355 ANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNA----MIFGFAMHGRANAAFD 410
Query: 433 VAQKLVA-EIDPEQ 445
+ ++ EI+P+
Sbjct: 411 IFSRMRKNEIEPDD 424
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 175/547 (31%), Positives = 275/547 (50%), Gaps = 84/547 (15%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINA-------------------------- 71
Q+H Q++ GF YI L++ YV +G L +A
Sbjct: 124 QLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRG 183
Query: 72 -----HKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLS 126
HK+F++ WN I G+A + ++++ L+K+M+ PDE T +LS
Sbjct: 184 XIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLS 243
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARS 186
CA+ G G QVH + G+ N+ I L++LY
Sbjct: 244 ACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLY----------------------- 280
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
K G+++ A +F + +++V+SW T+I G ++AL LF +M R
Sbjct: 281 -----------SKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLR 329
Query: 247 ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCG 306
+ + V +++ LSACA +G + +G+WIH Y+++ SL +LI MYA CG
Sbjct: 330 SGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNAS--SLRTSLIDMYAKCG 387
Query: 307 EIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLS 351
+IE A VF M R+ SW +MI GFA G A A +TF+G+LS
Sbjct: 388 DIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLS 447
Query: 352 ACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPND 411
ACSH G +D GR F M +++ + P++EHYGCM+DL +GL EA ++ M M+P+
Sbjct: 448 ACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDG 507
Query: 412 AVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQ 471
+ SLL C++H N EL AQ L+ +I+PE Y+ L++N+YA A+RW +VA R
Sbjct: 508 VIWCSLLKACKMHGNVELGESYAQNLI-KIEPENPGSYV-LLSNIYATAERWNEVAKTRA 565
Query: 472 KMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISE 531
+ G++K PG S ++I+ V+H+F+ GD + + IY L E+ + + G+ PD SE
Sbjct: 566 LLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSE 625
Query: 532 LFLGIEE 538
+ +EE
Sbjct: 626 VLQEMEE 632
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 147/442 (33%), Positives = 245/442 (55%), Gaps = 28/442 (6%)
Query: 24 FSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY---LINAHKVFEKTEN 80
SLL T ++L IH+Q+I G NY L+KLL V S + L A VF+ +
Sbjct: 6 LSLLHXCKTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQE 65
Query: 81 PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
P IWN M RGHA S P ++ LY M+ P+ YT+ FLL CA+ F+EG+Q+
Sbjct: 66 PXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQL 125
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKR 200
HG+VL G+ +++I T+L+++Y+ +G + A+ + D R VVS+ +L+ GY R
Sbjct: 126 HGQVLKFGFDLDLYIHTSLISMYVQNG---RLEDAQKVXDKSSHRDVVSYTALITGYASR 182
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
G I+ A K+FDE+P ++VVSW ISG A+ G ++AL LF +M + V D+ +V L
Sbjct: 183 GXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVL 242
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
SACA+ G ++LG+ +HS++ ++ G +V NALI +Y+ CGE+E A G+F+ +
Sbjct: 243 SACAQSGSIELGRQVHSWINDH-GFGXNLKIV---NALIDLYSKCGELETACGLFQGLSN 298
Query: 321 RNTVSWTSMITGFAKQGYAQEALLTF---------------LGVLSACSHGGFVDEGRQF 365
++ +SW ++I G+ +EALL F L +LSAC+H G +D GR
Sbjct: 299 KDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWI 358
Query: 366 FECMNQNW-GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
+++ G+ ++D++++ G ++ A + +M + + + +++ G +H
Sbjct: 359 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSM-LNRSLSSWNAMIFGFAMH 417
Query: 425 NNAELASQVAQKLVAE-IDPEQ 445
A A + ++ I+P+
Sbjct: 418 GRANAAFDIFSRMRKNGIEPDD 439
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 166/467 (35%), Positives = 248/467 (53%), Gaps = 57/467 (12%)
Query: 89 MIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASG 148
MIR S + Y M+ + P + ++S +L CA G + GE H +++ G
Sbjct: 1 MIRVSLESGVCPDFLGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMG 60
Query: 149 YCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWK 208
+ ++ ++T L++ Y K G ++ A
Sbjct: 61 FEYDMILQTGLLDFY----------------------------------AKHGYVEEARN 86
Query: 209 IFDEMPHRNV--VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEI 266
+FD M RN V+W TMIS Q G+ A+S+F +M+ V +V +V+ LSACA +
Sbjct: 87 LFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHL 146
Query: 267 GDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSW 326
G L +G+WIH Y+ R + V L NALI MY CG +E A VF + R+N W
Sbjct: 147 GALDMGEWIHGYIRTK----RLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCW 202
Query: 327 TSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQ 371
S+I G G +EA+ +TF+G+LS CSH G + G+++F M
Sbjct: 203 NSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLG 262
Query: 372 NWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELAS 431
+G++P +EHYGCMVDL RAG + EA L++ MPMKPN VLGSLL C+IH + +L
Sbjct: 263 VYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGE 322
Query: 432 QVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQING 491
QV Q+L+ E+DP Y+ L +N+YA+ RW DV R+ MIK GV K PG S +++N
Sbjct: 323 QVTQQLL-ELDPCDGGNYVFL-SNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNN 380
Query: 492 VLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++H+FVAGD+++ Q + I L EI + +G+ P+ + + IEE
Sbjct: 381 IVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEE 427
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 138/326 (42%), Gaps = 44/326 (13%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEK-TE-NPSTAIWNQMIRGHARSE 97
H QI+ GF + LL FY GY+ A +F+ TE N ++ WN MI + +
Sbjct: 53 HCQIMKMGFEYDMILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCG 112
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++ +++QM + +P E T LLS CA G GE +HG +IRT
Sbjct: 113 EFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHG-----------YIRT 161
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
RL D VV N+L+ Y K G ++ A +F + +N
Sbjct: 162 K-----------------RLKID------VVLGNALIDMYCKCGALEAAIDVFHGLSRKN 198
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+ W ++I G NG+ +A++ F M + + D V V LS C+ G L G+
Sbjct: 199 IFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQ---R 255
Query: 278 YVEENFSV-GREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITG--F 333
Y E V G EP V ++ + G ++EA + R M + N++ S++
Sbjct: 256 YFSEMLGVYGLEPG-VEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQI 314
Query: 334 AKQGYAQEALLTFLGVLSACSHGGFV 359
K E + L L C G +V
Sbjct: 315 HKDTKLGEQVTQQLLELDPCDGGNYV 340
>gi|242079801|ref|XP_002444669.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
gi|241941019|gb|EES14164.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
Length = 581
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 164/494 (33%), Positives = 271/494 (54%), Gaps = 58/494 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPS--TAIWNQMIRGHAR 95
Q+HS + G ++L L+ Y + Y A +V + + T WN +I G+ R
Sbjct: 114 QLHSLSVKLGLVSDTFVLNSLINMYSSCSYPATARQVLDSAPQGACDTVSWNTIISGYLR 173
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
P K++ + QM+ ++ D+ T L A+ G + G H V+ +G N ++
Sbjct: 174 GGMPNKALQAFGQMVKEQVTLDDVTLLNALVASAKAGKVKVGRLCHSLVVVNGAGINCYM 233
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
++L+++Y +CG+ ++ A K+F M
Sbjct: 234 GSSLISMY----AKCGL------------------------------VEDARKVFHGMHE 259
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
RNVV WT+MISG Q GK ++A++LF +M+ + +D + +S+CA++G L LG+++
Sbjct: 260 RNVVCWTSMISGYTQLGKFKEAVNLFRDMQITGMKVDDGTIATVVSSCAQMGALDLGRYV 319
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
H+Y + + +G+E +S+ N+LI MY+ CG+I +A+ +F + +R+ SWT+MI GF
Sbjct: 320 HAYCDVH-GLGKE---LSVKNSLIDMYSKCGDINKAHEIFCGLTKRDVFSWTAMIMGFTV 375
Query: 336 QGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
G EAL +TFLGVL++CSHGG V++G +F+ M+ + + PRI
Sbjct: 376 NGLCSEALDLFAQMEGEGKVMPNEVTFLGVLTSCSHGGLVEQGFHYFQRMSMVYKLAPRI 435
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
EHYGCMVDL RA L+ EA ++NMP+ P+ V SLL CR LA VA++++
Sbjct: 436 EHYGCMVDLLGRAKLLTEAEQFIKNMPIAPDVVVWRSLLFACRACGEVGLAEFVAERIL- 494
Query: 440 EIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG 499
E++P++ AG++ L++NVYA RW DV +R M + K PG S+++++G +H+F AG
Sbjct: 495 ELEPKKCAGHV-LLSNVYATTSRWVDVNELRTSMDNSRMSKQPGCSFIEVDGCVHEFFAG 553
Query: 500 DSTYKQASLIYKTL 513
D ++ + IY L
Sbjct: 554 DESHLETEAIYNIL 567
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 138/300 (46%), Gaps = 58/300 (19%)
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV-GCA 175
D Y+ + S +R G Q+H + G S+ F+ +L+N+Y C A
Sbjct: 92 DNYSLNIAFSATSRLPSVSVGAQLHSLSVKLGLVSDTFVLNSLINMY----SSCSYPATA 147
Query: 176 RLLFDDMP--ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGK 233
R + D P A VSWN+++ GY++ G MP++
Sbjct: 148 RQVLDSAPQGACDTVSWNTIISGYLRGG-----------MPNK----------------- 179
Query: 234 SRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVS 293
AL F +M + +V LD V L+ AL A A+ G +K+G+ HS V N + +
Sbjct: 180 ---ALQAFGQMVKEQVTLDDVTLLNALVASAKAGKVKVGRLCHSLVVVNGA----GINCY 232
Query: 294 LNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF------- 346
+ ++LI MYA CG +E+A VF M RN V WTSMI+G+ + G +EA+ F
Sbjct: 233 MGSSLISMYAKCGLVEDARKVFHGMHERNVVCWTSMISGYTQLGKFKEAVNLFRDMQITG 292
Query: 347 --------LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEA 398
V+S+C+ G +D GR + G+ + ++D++S+ G +++A
Sbjct: 293 MKVDDGTIATVVSSCAQMGALDLGR-YVHAYCDVHGLGKELSVKNSLIDMYSKCGDINKA 351
>gi|356505262|ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Glycine max]
Length = 566
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 183/569 (32%), Positives = 291/569 (51%), Gaps = 99/569 (17%)
Query: 6 IIPANPATSSKALTTRQIF---------SLLQIRNTTKTLFQIHSQIIINGFSQKNYILA 56
+IP +TS ++++ F +LL+ + L Q+H+ II G Q ++++
Sbjct: 6 VIPIPTSTSMRSISHSSPFRLHSAASITTLLKACKKREHLEQVHACIIHRGLEQDHFLVF 65
Query: 57 KLLA-FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETE 115
++ + L A VF + PST +WN +I+ H + ++ + +M
Sbjct: 66 LFISRAHTLLSTLSYASSVFHRVLAPSTVLWNTLIKSHCQKNLFSHTLSAFARMKAHGAL 125
Query: 116 PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG---- 171
PD +TY ++ C+ REG+ +HG G ++++ T+L+++Y G+CG
Sbjct: 126 PDSFTYPSVIKACSGTCKAREGKSLHGSAFRCGVDQDLYVGTSLIDMY----GKCGEIAD 181
Query: 172 ----------------------------VGCARLLFDDMPARSVVSWNSLLKGYVKRGDI 203
V AR LFD+MP R+V SWNS+L+G+VK GD+
Sbjct: 182 ARKVFDGMSDRNVVSWTAMLVGYVAVGDVVEARKLFDEMPHRNVASWNSMLQGFVKMGDL 241
Query: 204 DGAWKIFDEMPHRNVVS-------------------------------WTTMISGCAQNG 232
GA +FD MP +NVVS W+ +ISG QNG
Sbjct: 242 SGARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFDCSLEKDVVAWSALISGYVQNG 301
Query: 233 KSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE-NFSVGREPVL 291
QAL +F EM V D+ LV+ +SA A++G L+L +W+ SYV + + ++ V+
Sbjct: 302 LPNQALRVFLEMELMNVKPDEFILVSLMSASAQLGHLELAQWVDSYVSKICIDLQQDHVI 361
Query: 292 VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------- 343
AL+ M A CG +E A +F + RR+ V + SMI G + G +EA+
Sbjct: 362 A----ALLDMNAKCGNMERALKLFDEKPRRDVVLYCSMIQGLSIHGRGEEAVNLFNRMLM 417
Query: 344 -------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMD 396
+ F +L+ACS G VDEGR +F+ M Q + I P +HY CMVDL SR+G +
Sbjct: 418 EGLTPDEVAFTVILTACSRAGLVDEGRNYFQSMKQKYCISPLPDHYACMVDLLSRSGHIR 477
Query: 397 EAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANV 456
+A+ L++ +P +P+ G+LL C+++ ++EL VA +L E++P AA Y+ L++++
Sbjct: 478 DAYELIKLIPWEPHAGAWGALLGACKLYGDSELGEIVANRLF-ELEPLNAANYV-LLSDI 535
Query: 457 YAAAKRWQDVAAVRQKMIKMGVRKPPGQS 485
YAAA+RW DV+ VR KM + VRK PG S
Sbjct: 536 YAAAERWIDVSLVRSKMRERRVRKIPGSS 564
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 173/552 (31%), Positives = 277/552 (50%), Gaps = 84/552 (15%)
Query: 33 TKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPS----TAI--- 85
+K QIH ++ G+ Y+ L++ YV + L +AHKVF+++ + TA+
Sbjct: 79 SKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTG 138
Query: 86 ------------------------WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
WN MI G+ + ++++ L+K+M+ PDE T
Sbjct: 139 YASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTM 198
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDD 181
++S AR G G QVH + G+ SN+ I
Sbjct: 199 VTVISASARSGSIELGRQVHSWIADHGFGSNLKIV------------------------- 233
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
N+L+ Y K G+++ A +F + +++V+SW +I G ++AL LF
Sbjct: 234 ---------NALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLF 284
Query: 242 NEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHM 301
EM R+ + V +++ L ACA +G + +G+WIH Y+++ SL +LI M
Sbjct: 285 QEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNAS--SLRTSLIDM 342
Query: 302 YASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTF 346
Y+ CG+IE A+ VF M ++ +W +MI GFA G A A +TF
Sbjct: 343 YSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITF 402
Query: 347 LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP 406
+G+LSACSH G +D GR F M N+ I P++EHYGCM+DL +GL EA ++ M
Sbjct: 403 VGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMT 462
Query: 407 MKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDV 466
M+P+ + SLL C++H N EL + AQ L +I+P Y+ L++N+YA A RW +V
Sbjct: 463 MEPDGVIWCSLLKACKMHGNVELGEKFAQNLF-KIEPNNPGSYV-LLSNIYATAGRWNEV 520
Query: 467 AAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYK 526
A +R + G++K PG S ++I+ V+H+F+ GD + + IY L E+ + + G+
Sbjct: 521 ARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFV 580
Query: 527 PDISELFLGIEE 538
PD SE+ +EE
Sbjct: 581 PDTSEVLQEMEE 592
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 129/389 (33%), Positives = 208/389 (53%), Gaps = 25/389 (6%)
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGL 133
VFE + P+ IWN M RGHA S P ++ LY MI P+ YT+ FLL CA+
Sbjct: 19 VFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKA 78
Query: 134 FREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSL 193
+EG Q+HG VL GY ++++ T+L+++Y+ + + A +FD R VVS+ +L
Sbjct: 79 SKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNE---RLEDAHKVFDRSSHRDVVSYTAL 135
Query: 194 LKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQ 253
+ GY RG I+ A +FDE+P ++VVSW MISG + G ++AL LF EM + V D+
Sbjct: 136 VTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDE 195
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
+V +SA A G ++LG+ +HS++ ++ G +V NALI Y+ CGE+E A G
Sbjct: 196 STMVTVISASARSGSIELGRQVHSWIADH-GFGSNLKIV---NALIDFYSKCGEMETACG 251
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF---------------LGVLSACSHGGF 358
+F + ++ +SW +I G+ +EALL F L +L AC+H G
Sbjct: 252 LFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGA 311
Query: 359 VDEGRQFFECMNQNW-GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSL 417
+D GR +++ G+ ++D++S+ G ++ A + +M K A ++
Sbjct: 312 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPA-WNAM 370
Query: 418 LLGCRIHNNAELASQVAQKLVA-EIDPEQ 445
+ G +H A A + ++ EI P+
Sbjct: 371 IFGFAMHGRANAAFDIFSRMRKNEIKPDD 399
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 170/499 (34%), Positives = 269/499 (53%), Gaps = 55/499 (11%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMID-KETEP 116
L+A YV+ GY+ +A K+F++ WN MI G+ + ++++ L+K+M+ P
Sbjct: 161 LIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRP 220
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCAR 176
DE T ++S CA+ G VH + G+ SN+ I L++LY
Sbjct: 221 DESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLY------------- 267
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
K G+++ A ++FD + +++V+SW T+I G ++
Sbjct: 268 ---------------------SKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKE 306
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
AL LF EM R+ + V +++ L ACA +G + +G+WIH Y+ + G + SL
Sbjct: 307 ALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLK-GVVTNVSSLQT 365
Query: 297 ALIHMYASCGEIEEAYGVF-RKMQRRNTVSWTSMITGFAKQGYAQEAL------------ 343
+LI MYA CG+I+ A VF M R+ +W +MI+GFA G A A
Sbjct: 366 SLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIE 425
Query: 344 ---LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFS 400
+TF+G+LSACSH G +D GR F M + + I P++EHYGCM+DL +GL EA
Sbjct: 426 PDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEE 485
Query: 401 LVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAA 460
++ MPM+P+ + SLL C+IH N EL A+KL+ +I+P + Y+ L++N+YAAA
Sbjct: 486 MINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLI-KIEPGNSGSYV-LLSNIYAAA 543
Query: 461 KRWQDVAAVRQKMIKMGVRKP-PGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
RW +VA +R + G++K PG S ++I+ V+H+F+ GD + Q IY L E+ +
Sbjct: 544 GRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVL 603
Query: 520 AMQEGYKPDISELFLGIEE 538
+ G+ PD SE+ +EE
Sbjct: 604 LEEAGFVPDTSEVLQEMEE 622
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 145/462 (31%), Positives = 243/462 (52%), Gaps = 40/462 (8%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLIN---AHKVFEKTENPSTAIWNQMIRGHAR 95
IH+Q+I G NY L+KLL F V S + A VF+ + P+ IWN M RGHA
Sbjct: 7 IHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGHAL 66
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
S P ++ LY MI PD YT+ FLL CA+ + +EG+Q+HG VL G+ ++++
Sbjct: 67 SSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYV 126
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
T+L+++Y +G + AR +FD R VVS+ +L+ GYV RG I+ A K+FDE+P
Sbjct: 127 HTSLISMYAQNG---RLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPG 183
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNE-MRRARVGLDQVALVAALSACAEIGDLKLGKW 274
++VVSW MISG + G ++AL LF E M V D+ +V +SACA+ ++LG+
Sbjct: 184 KDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRH 243
Query: 275 IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
+HS++ ++ ++ NALI +Y+ GE+E A +F + ++ +SW ++I G+
Sbjct: 244 VHSWINDHGFASNLKIV----NALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYT 299
Query: 335 KQGYAQEALLTF---------------LGVLSACSHGGFVDEGRQFFECMNQNW-GIKPR 378
+EALL F L +L AC+H G +D GR +N+ G+
Sbjct: 300 HMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTN 359
Query: 379 IEHY-GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
+ ++D++++ G +D A + + + + +++ G +H A A + ++
Sbjct: 360 VSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRM 419
Query: 438 -VAEIDPEQA-----------AGYLALVANVYAAAKRWQDVA 467
+ I+P+ +G L L N++ + R ++
Sbjct: 420 RMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEIT 461
>gi|242045040|ref|XP_002460391.1| hypothetical protein SORBIDRAFT_02g027420 [Sorghum bicolor]
gi|241923768|gb|EER96912.1| hypothetical protein SORBIDRAFT_02g027420 [Sorghum bicolor]
Length = 573
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 172/460 (37%), Positives = 262/460 (56%), Gaps = 28/460 (6%)
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGY-CSNVFIR 156
P ++ L+ ++ +PD Y L+ CAR Q+H G+ S+ +R
Sbjct: 58 NPHLALRLFDHLLRSGADPDPAAYELALASCARGKDRATAAQLHAHAAKRGFLASHRRVR 117
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRG-DIDGAWKIFDEMPH 215
L++ Y + G + AR +FD +V+WN LL+GY + G D D F MP
Sbjct: 118 CRLVHAYAVCGM---LPHARRVFDGGTDNDMVAWNCLLRGYAQEGGDADLLRDFFARMPS 174
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR-VGLDQVALVAALSACAEIGDLKLGKW 274
R+ VSW T++S C NG+ +A+++F EM ++ D+V LV+ +SA A +G L G W
Sbjct: 175 RDSVSWNTVLSLCVVNGEYDEAIAVFREMLASQECQPDRVTLVSVVSAIAYLGALAQGLW 234
Query: 275 IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGF 333
H+YV G E V L++ALI+MY+ CG +E A VF ++ +R+ +W +M+ GF
Sbjct: 235 AHAYV---IRKGVE-VEEKLSSALINMYSKCGFLEGAVYVFDNVRGKRSLDTWNAMLAGF 290
Query: 334 AKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
G + AL +TF +L+ACSHGG V+EG + F+ M++ +GI+P
Sbjct: 291 TANGCSGRALALFTRMETTGLMPNKITFNCILNACSHGGLVEEGMRCFQRMSRVYGIEPD 350
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
I HYGCMVDLF RAG+ ++A ++Q MPM+P+ ++L +LL CR H N EL + +L+
Sbjct: 351 IAHYGCMVDLFCRAGMFEKAEEIIQIMPMEPDASMLKALLGACRTHKNLELGKKAGHRLI 410
Query: 439 AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVA 498
E P AGY+ L++N+YA W V VR+ M+ GV K PG S V++NGV+H+F++
Sbjct: 411 -EAAPNDHAGYV-LLSNIYALDGNWGRVHKVRKLMLDRGVLKTPGSSSVELNGVIHEFIS 468
Query: 499 GDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
GD ++ + IYK L EI Q GY PD S++ L I++
Sbjct: 469 GDKSHSRKRDIYKMLDEICQQLKSAGYTPDTSQVLLDIDD 508
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 136/308 (44%), Gaps = 16/308 (5%)
Query: 35 TLFQIHSQIIINGF-SQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGH 93
T Q+H+ GF + + +L+ Y G L +A +VF+ + WN ++RG+
Sbjct: 96 TAAQLHAHAAKRGFLASHRRVRCRLVHAYAVCGMLPHARRVFDGGTDNDMVAWNCLLRGY 155
Query: 94 ARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNV 153
A+ L + + D +++ +LS+C G + E V +LAS C
Sbjct: 156 AQEGGDAD---LLRDFFARMPSRDSVSWNTVLSLCVVNGEYDEAIAVFREMLASQECQP- 211
Query: 154 FIRTNLMNL-----YLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWK 208
R L+++ YL + + A ++ + +S ++L+ Y K G ++GA
Sbjct: 212 -DRVTLVSVVSAIAYLGALAQGLWAHAYVIRKGVEVEEKLS-SALINMYSKCGFLEGAVY 269
Query: 209 IFDEMP-HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIG 267
+FD + R++ +W M++G NG S +AL+LF M + +++ L+AC+ G
Sbjct: 270 VFDNVRGKRSLDTWNAMLAGFTANGCSGRALALFTRMETTGLMPNKITFNCILNACSHGG 329
Query: 268 DLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
++ G + + + G EP + ++ ++ G E+A + + M S
Sbjct: 330 LVEEG--MRCFQRMSRVYGIEPDIAHY-GCMVDLFCRAGMFEKAEEIIQIMPMEPDASML 386
Query: 328 SMITGFAK 335
+ G +
Sbjct: 387 KALLGACR 394
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 175/500 (35%), Positives = 276/500 (55%), Gaps = 28/500 (5%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKET-EP 116
L++ Y+ SG A FEK + WN MI G+++ +++ ++ +M+++ + +P
Sbjct: 214 LISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKP 273
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCAR 176
D +T + +LS CA G+Q+H +L + ++ + L+++Y SGG V AR
Sbjct: 274 DNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGG---VEIAR 330
Query: 177 LLFDDMPARS--VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
L+ + + ++++ SLL GY K G++ A +IF+++ R+VV+WT MI G QNG
Sbjct: 331 LIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLW 390
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
AL LF M + L A LS + + L+ GK IH+ + E S+
Sbjct: 391 NDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIK----AGESSTPSV 446
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQGYAQEAL---------- 343
NALI MYA G I A VF ++ VSWTSMI A+ G +EA+
Sbjct: 447 TNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVG 506
Query: 344 -----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEA 398
+T++GVLSAC+H G V++GR+++ M + I+P + HY CM+DL+ RAGL+ EA
Sbjct: 507 MKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEA 566
Query: 399 FSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYA 458
+ +++MP++P++ GSLL C+IH NA+LA A++L+ IDP + YLAL ANVY+
Sbjct: 567 YLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLL-IDPGNSGAYLAL-ANVYS 624
Query: 459 AAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITM 518
A +W++ A R+ M GVRK G SW+ I +H F D + Q IYK + EI
Sbjct: 625 ACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWE 684
Query: 519 QAMQEGYKPDISELFLGIEE 538
+ + G+ PD + +EE
Sbjct: 685 EIKKMGFIPDTESVLHDLEE 704
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 189/399 (47%), Gaps = 80/399 (20%)
Query: 19 TTRQIFS-LLQIRNTTKTLF---QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKV 74
T+ + F+ +LQ K F +H QII G Y++ L+ FY +G L AH V
Sbjct: 8 TSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHV 67
Query: 75 FEKTENPSTAIWNQMIRGHARS-----------ETP--------------------EKSV 103
F++ ST WN +I G+A+ E P + ++
Sbjct: 68 FDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAI 127
Query: 104 YLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLY 163
+++ +MI + P ++T S +LS CA G ++H V+ G S V + T+L+N+Y
Sbjct: 128 WMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMY 187
Query: 164 LMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTT 223
G A+++FD M +++ +WN+L+ Y++ G + A F++MP R++VSW +
Sbjct: 188 AKCGDPV---IAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNS 244
Query: 224 MISGCAQNGKSRQALSLFNEM-RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV--E 280
MISG +Q G + +AL +F++M + D L + LSACA + L +GK IH+Y+
Sbjct: 245 MISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRA 304
Query: 281 ENFSVGREPVLVSLNNALIHMYASCGEIE------------------------------- 309
E + G ++ NALI MYA G +E
Sbjct: 305 ETETSG------AVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGN 358
Query: 310 --EAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
A +F K++ R+ V+WT+MI G+ + G +AL F
Sbjct: 359 VKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELF 397
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 183/405 (45%), Gaps = 61/405 (15%)
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFD 180
++ +L R G VH +++ G V++ NLM Y +G + A +FD
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGS---LRFAHHVFD 69
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSL 240
+MP +S SWN+L+ GY K+G+ + + ++ EMP + VSWT +I G Q G A+ +
Sbjct: 70 EMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWM 129
Query: 241 FNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE---------------NFSV 285
F +M RV Q + LS+CA L +G+ IHS+V + ++
Sbjct: 130 FAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAK 189
Query: 286 GREPVL------------VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF 333
+PV+ +S NALI +Y G+ E A F KM R+ VSW SMI+G+
Sbjct: 190 CGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGY 249
Query: 334 AKQGYAQEALLTF----------------LGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
++QGY EAL+ F +LSAC++ ++ G+Q + ++
Sbjct: 250 SQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQI-----HAYILRA 304
Query: 378 RIEHYG----CMVDLFSRAGLMDEAFSLVQ-NMPMKPNDAVLGSLLLGCRIHNNAELASQ 432
E G ++ +++++G ++ A +V+ N N SLL G N + A +
Sbjct: 305 ETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPARE 364
Query: 433 VAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMG 477
+ KL + A++ Y W D + + M+ G
Sbjct: 365 IFNKL----RDRDVVAWTAMIVG-YVQNGLWNDALELFRLMVNEG 404
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI-WNQMIRGHARS 96
QIH+ I G S + L+A Y +G + A +VF+ + W MI A+
Sbjct: 430 QIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQH 489
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVH 141
++++ L+++M+ +PD TY +LS C GL +G + +
Sbjct: 490 GLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYY 534
>gi|224094065|ref|XP_002310070.1| predicted protein [Populus trichocarpa]
gi|222852973|gb|EEE90520.1| predicted protein [Populus trichocarpa]
Length = 438
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 169/441 (38%), Positives = 259/441 (58%), Gaps = 31/441 (7%)
Query: 116 PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGC 174
PD TY FL +R G +HG V+ SG+ + F+ +L+++Y G CG +
Sbjct: 8 PDHLTYPFLAKATSRLLRKELGVSIHGHVIKSGFEIDRFVANSLIHMY----GSCGDIVY 63
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
AR +FD P +++VSWNS++ GY K G +D A +FD MP R+V SW+ +I G A++G
Sbjct: 64 ARKVFDGTPVKNLVSWNSMVDGYAKCGYLDLARGLFDLMPERDVRSWSCLIDGYAKSGNY 123
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
A+++F +MR + ++V +V+ L ACA +G L G+ +H Y+ +N G E LV L
Sbjct: 124 GDAMAVFEKMRTSGPKANEVTMVSVLCACAHLGALDKGRMMHQYLVDN---GFELNLV-L 179
Query: 295 NNALIHMYASCGEIEEAYGVFR--KMQRRNTVSWTSMITGFAKQGYAQEAL--------- 343
+LI MYA CG +EEA+ VFR +++ + + W +MI G A G +E+L
Sbjct: 180 RTSLIDMYAKCGAVEEAFAVFRGVSLRKSDVLIWNAMIGGLATHGLVKESLDLYTEMQIA 239
Query: 344 ------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDE 397
+TFL +LSAC+HGG V + FE + +N G+ P+ EHY CMVD+ +RAG + E
Sbjct: 240 GIKPDEITFLCLLSACAHGGLVKQASYVFEGLGKN-GMTPKTEHYACMVDVMARAGQVAE 298
Query: 398 AFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVY 457
A+ + MP++P ++LG+LL GC H +LA + +KL+ E+DPE Y+ L +NVY
Sbjct: 299 AYQFLCQMPLEPTASMLGALLSGCMNHGKLDLAELIGKKLI-ELDPEHDGRYVGL-SNVY 356
Query: 458 AAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEIT 517
A +RW + +R+ M + GV+K PG S+++++G H F+A D ++ + IY L I
Sbjct: 357 AIGRRWDEARIMREAMERRGVKKTPGYSFLEMSGAHHRFIAHDKSHPSSEQIYTMLSFIV 416
Query: 518 MQAMQEGYKPDISELFL-GIE 537
Q MQ G + E L GIE
Sbjct: 417 SQ-MQFGVLKEGQEHCLYGIE 436
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 143/303 (47%), Gaps = 12/303 (3%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
IH +I +GF ++ L+ Y + G ++ A KVF+ T + WN M+ G+A+
Sbjct: 32 IHGHVIKSGFEIDRFVANSLIHMYGSCGDIVYARKVFDGTPVKNLVSWNSMVDGYAKCGY 91
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSN-VFIRT 157
+ L + + D E D ++S L+ A+ G + + V ++ SG +N V + +
Sbjct: 92 LD----LARGLFDLMPERDVRSWSCLIDGYAKSGNYGDAMAVFEKMRTSGPKANEVTMVS 147
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR- 216
L + + G + L D+ ++V SL+ Y K G ++ A+ +F + R
Sbjct: 148 VLCACAHLGALDKGRMMHQYLVDNGFELNLVLRTSLIDMYAKCGAVEEAFAVFRGVSLRK 207
Query: 217 -NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
+V+ W MI G A +G +++L L+ EM+ A + D++ + LSACA G +K ++
Sbjct: 208 SDVLIWNAMIGGLATHGLVKESLDLYTEMQIAGIKPDEITFLCLLSACAHGGLVKQASYV 267
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT-SMITGFA 334
+ +N G P ++ + A G++ EAY +M T S ++++G
Sbjct: 268 FEGLGKN---GMTPK-TEHYACMVDVMARAGQVAEAYQFLCQMPLEPTASMLGALLSGCM 323
Query: 335 KQG 337
G
Sbjct: 324 NHG 326
>gi|326511827|dbj|BAJ92058.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 581
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 163/494 (32%), Positives = 264/494 (53%), Gaps = 58/494 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTEN--PSTAIWNQMIRGHAR 95
Q+H+ + G S ++L L+ Y + Y A V + T WN +I G+
Sbjct: 114 QLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVLDSAPKGASDTVSWNTIIAGYIH 173
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
+ P K++ + QM + D+ T L CAR + + G+ H ++ +G+ N ++
Sbjct: 174 AGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLVTNGFEINCYM 233
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
++L+++Y K G ++ A +IFD MP
Sbjct: 234 GSSLISMY----------------------------------AKCGQVEDARRIFDGMPD 259
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
RN V WT+MISG Q G+S++A+ LF +M+ A V +D + +S+C ++G L LG+++
Sbjct: 260 RNAVCWTSMISGYTQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYV 319
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
H+Y + + +G++ +S+ N+LI MY+ CG+I++AY +F M +R+ SWT +I GFA
Sbjct: 320 HAYCDIH-GLGKD---ISVKNSLIDMYSKCGDIKKAYDIFCGMVKRDNFSWTVIIMGFAA 375
Query: 336 QGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
G + EAL +TFLGVL++CSHGG V++G + F M+ +GI PRI
Sbjct: 376 NGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSCSHGGLVEQGYRHFHRMSSIYGIAPRI 435
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
EHYGCMVDL RA L+ EA ++ MP+ P+ + SLL CR LA VA++ +
Sbjct: 436 EHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAVMWRSLLFACRTCGEVGLAEYVAER-IQ 494
Query: 440 EIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG 499
++P + G + L++ VYA RW D VR + K PG S+++++G +H+F AG
Sbjct: 495 VLEPNKCGGDV-LLSTVYATTSRWVDANKVRTGIYSGRKTKQPGCSFIEVDGCVHEFFAG 553
Query: 500 DSTYKQASLIYKTL 513
D ++ + IY TL
Sbjct: 554 DESHFETEAIYSTL 567
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 22/173 (12%)
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEE 310
+D +L AALS A + + +G +H+ + + + ++ N LI+MY+SC
Sbjct: 91 IDNYSLSAALSTAARMPSVVVGAQLHA-LSVKLGLSSDTFVL---NTLINMYSSCSYPST 146
Query: 311 AYGVFRKMQR--RNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSAC 353
A V + +TVSW ++I G+ G +AL +T L L AC
Sbjct: 147 ARSVLDSAPKGASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVAC 206
Query: 354 SHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP 406
+ + G+ + N G + ++ ++++ G +++A + MP
Sbjct: 207 ARTCMMKVGKLCHALLVTN-GFEINCYMGSSLISMYAKCGQVEDARRIFDGMP 258
>gi|110741623|dbj|BAE98759.1| hypothetical protein [Arabidopsis thaliana]
Length = 504
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 163/467 (34%), Positives = 263/467 (56%), Gaps = 27/467 (5%)
Query: 68 LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSV 127
L+ A K+F+ +N T ++N++I+ + P +S+ LY + P +T++F+ +
Sbjct: 25 LVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAA 84
Query: 128 CARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSV 187
A R +H + SG+ S+ F T L+ Y G C CAR +FD+M R V
Sbjct: 85 SASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALC---CARRVFDEMSKRDV 141
Query: 188 VSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRA 247
WN+++ GY +RGD+ A ++FD MP +NV SWTT+ISG +QNG +AL +F M +
Sbjct: 142 PVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKD 201
Query: 248 R-VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCG 306
+ V + + +V+ L ACA +G+L++G+ + Y EN + + NA I MY+ CG
Sbjct: 202 KSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDN----IYVCNATIEMYSKCG 257
Query: 307 EIEEAYGVFRKM-QRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVL 350
I+ A +F ++ +RN SW SMI A G EAL +TF+G+L
Sbjct: 258 MIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLL 317
Query: 351 SACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPN 410
AC HGG V +G++ F+ M + I P++EHYGCM+DL R G + EA+ L++ MPMKP+
Sbjct: 318 LACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPD 377
Query: 411 DAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVR 470
V G+LL C H N E+A ++A + + +++P G +++N+YAA ++W V +R
Sbjct: 378 AVVWGTLLGACSFHGNVEIA-EIASEALFKLEPTN-PGNCVIMSNIYAANEKWDGVLRMR 435
Query: 471 QKMIKMGVRKPPGQSW-VQINGVLHDFVAGDSTYKQASLIYKTLGEI 516
+ M K + K G S+ V++ +H F D ++ ++ IY+ L EI
Sbjct: 436 KLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEI 482
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 136/344 (39%), Gaps = 73/344 (21%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGH 93
+ L +HSQ +GF ++ L+ Y G L A +VF++ +WN MI G+
Sbjct: 92 RPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGY 151
Query: 94 AR-----------SETPEKSVYLYKQMI---------------------DKETEPDEYTY 121
R P K+V + +I DK +P+ T
Sbjct: 152 QRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITV 211
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFD 180
+L CA G G ++ G +G+ N+++ + +Y +CG + A+ LF+
Sbjct: 212 VSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMY----SKCGMIDVAKRLFE 267
Query: 181 DM-PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
++ R++ SWNS MI A +GK +AL+
Sbjct: 268 ELGNQRNLCSWNS-------------------------------MIGSLATHGKHDEALT 296
Query: 240 LFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
LF +M R D V V L AC G + G+ + +EE + + + +I
Sbjct: 297 LFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPK---LEHYGCMI 353
Query: 300 HMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAKQGYAQEA 342
+ G+++EAY + + M + + V W +++ + G + A
Sbjct: 354 DLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA 397
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 176/594 (29%), Positives = 301/594 (50%), Gaps = 74/594 (12%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
ML ++P N S + +L R Q+H ++GF +++ + L+
Sbjct: 105 MLTRGLMPDNRVLPSAVKACAGLSALKPAR-------QVHGIASVSGFDSDSFVQSSLVH 157
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y+ + +AH+VF++ P W+ ++ +AR +++ L+ +M D +P+ +
Sbjct: 158 MYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLIS 217
Query: 121 YSFLLSVCARCGLFRE-----------------------------------GEQVHGRVL 145
++ +++ GL+ E G +HG V+
Sbjct: 218 WNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVI 277
Query: 146 ASGYCSNVFIRTNLMNLYLMSGGECGVGCA-RLLFDDMPARSVVSWNSLLKGYVKRGDID 204
G S+ + + L+++Y G+C +FD M V S N+ + G + G ++
Sbjct: 278 KQGLVSDKCVSSALIDMY----GKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVE 333
Query: 205 GAWKIFDEMPHR----NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
+ ++F ++ + NVVSWT+MI+ C+QNG+ +AL LF EM+ A V + V + L
Sbjct: 334 SSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLL 393
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGRE-PVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
AC I L GK H FS+ R V + +ALI MYA CG I+ + F +
Sbjct: 394 PACGNIAALMHGKAAHC-----FSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIP 448
Query: 320 RRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQ 364
+N V W ++I G+A G A+EA+ ++F VLSACS G +EG
Sbjct: 449 TKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSY 508
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
+F M+ +GI+ R+EHY CMV L SRAG +++A+++++ MP+ P+ V G+LL CR+H
Sbjct: 509 YFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVH 568
Query: 425 NNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQ 484
NN L A+KL E++P Y+ L++N+YA+ W +V VR M G+RK PG
Sbjct: 569 NNVSLGEVAAEKLF-ELEPSNPGNYI-LLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGC 626
Query: 485 SWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
SW+++ +H +AGD ++ Q + I + L +++M+ + GY P+I+ + +EE
Sbjct: 627 SWIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEMKKLGYFPEINFVLQDVEE 680
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 182/404 (45%), Gaps = 40/404 (9%)
Query: 29 IRNTTKTLFQI---HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI 85
+ +TT +L Q H+ I+ G ++ KLL+ Y + +A V + P+
Sbjct: 22 LNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFS 81
Query: 86 WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVL 145
++ +I ++ ++ + QM+ + PD + CA + QVHG
Sbjct: 82 FSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIAS 141
Query: 146 ASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDID 204
SG+ S+ F++++L+++Y+ +C + A +FD M VVSW++L+ Y ++G +D
Sbjct: 142 VSGFDSDSFVQSSLVHMYI----KCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVD 197
Query: 205 GAWKIFDEMP----HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
A ++F EM N++SW MI+G +G +A+ +F +M D + + L
Sbjct: 198 EAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVL 257
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
A ++ DL +G IH YV + V + V ++ALI MY C E VF +M
Sbjct: 258 PAVGDLEDLVMGILIHGYVIKQGLVSDKCV----SSALIDMYGKCSCTSEMSQVFDQMDH 313
Query: 321 RNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
+ S + I G ++ G + +L F RQ ++ G++ +
Sbjct: 314 MDVGSCNAFIFGLSRNGQVESSLRLF----------------RQL-----KDQGMELNVV 352
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPM---KPNDAVLGSLLLGC 421
+ M+ S+ G EA L + M + KPN + LL C
Sbjct: 353 SWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPAC 396
>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
Length = 558
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 183/521 (35%), Positives = 271/521 (52%), Gaps = 62/521 (11%)
Query: 36 LFQIHSQIIINGFSQKNYILAKLLAFYVTSG--YLINAHKVFEKTENPSTAIWNQMIRGH 93
++++H++++ G L +LL S L A +F+ P T +N +IR H
Sbjct: 4 IYKLHARLLKTGHHNHPLALRRLLLSCAASAPASLSYARSIFDLIAFPDTFAFNTIIRAH 63
Query: 94 ARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNV 153
A S K M PD +T+ F+L CAR + G +H + G+ S+V
Sbjct: 64 ADSSPSFSLSLFSK-MTMAGVSPDHFTFPFVLKACAR---LQTGLDLHSLLFKLGFDSDV 119
Query: 154 FIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
+++ L++ Y GC G +D A K F+EM
Sbjct: 120 YVQNGLIHFY---------GCC-------------------------GFLDFALKAFEEM 145
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR-ARVGLDQVALVAALSACAEIGDLKLG 272
P R++VSW++MI+ A+NG +AL+LF M+ V D+V +++ +SA + +GDL+LG
Sbjct: 146 PERDLVSWSSMIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELG 205
Query: 273 KWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
KWI ++ N G E VSL AL+ M++ CG IEE+ VF +M RN ++WT++I G
Sbjct: 206 KWIRGFISRN---GLE-FTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALING 261
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
A G + EAL +TF GVL ACSHGG V EG FE + +G++P
Sbjct: 262 LAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEP 321
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
EHYGCMVDL RAGL++EA V MP++PN + +LL C HN ELA +V +K
Sbjct: 322 LPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNHNYIELAEKVKEK- 380
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
+ E+D Y+ L++NVY RW + A VR M + + K PG S + +N ++H+FV
Sbjct: 381 INELDSYHDGDYV-LLSNVYGGVGRWAEKAGVRNSMREKRISKKPGCSLINVNHLIHEFV 439
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
AGD+ + Q I + L + GY PDIS + IEE
Sbjct: 440 AGDNNHPQFESIREFLVSMIDSLKVVGYTPDISNVLFDIEE 480
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 130/312 (41%), Gaps = 41/312 (13%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGH 93
+T +HS + GF Y+ L+ FY G+L A K FE+ W+ MI
Sbjct: 101 QTGLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKAFEEMPERDLVSWSSMIACF 160
Query: 94 ARSETPEKSVYLYKQM-IDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSN 152
A++ +++ L+++M + +PDE ++S + G G+ + G + +G
Sbjct: 161 AKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFT 220
Query: 153 VFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFD 211
V + T L++++ CG + + +FD+M R+V++W +L
Sbjct: 221 VSLGTALVDMF----SRCGCIEESMRVFDEMGERNVLTWTAL------------------ 258
Query: 212 EMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKL 271
I+G A +G+S +AL +F EMR D V L AC+ G +
Sbjct: 259 -------------INGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHGGLVSE 305
Query: 272 GKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMI 330
G + + + G EP L ++ + G + EA M R N++ W +++
Sbjct: 306 GWHVFESIRNEY--GMEP-LPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLL 362
Query: 331 TGFAKQGYAQEA 342
Y + A
Sbjct: 363 GACVNHNYIELA 374
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 175/500 (35%), Positives = 276/500 (55%), Gaps = 28/500 (5%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKET-EP 116
L++ Y+ SG A FEK + WN MI G+++ +++ ++ +M+++ + +P
Sbjct: 214 LISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKP 273
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCAR 176
D +T + +LS CA G+Q+H +L + ++ + L+++Y SGG V AR
Sbjct: 274 DNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGG---VEIAR 330
Query: 177 LLFDD--MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
L+ + +++++ SLL GY K G++ A +IF+++ R+VV+WT MI G QNG
Sbjct: 331 LIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLW 390
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
AL LF M + L A LS + + L+ GK IH+ + E S+
Sbjct: 391 NDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIK----AGESSTPSV 446
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQGYAQEAL---------- 343
NALI MYA G I A VF ++ VSWTSMI A+ G +EA+
Sbjct: 447 TNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVG 506
Query: 344 -----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEA 398
+T++GVLSAC+H G V++GR+++ M + I+P + HY CM+DL+ RAGL+ EA
Sbjct: 507 MKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEA 566
Query: 399 FSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYA 458
+ +++MP++P++ GSLL C+IH NA+LA A++L+ IDP + YLAL ANVY+
Sbjct: 567 YLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLL-IDPGNSGAYLAL-ANVYS 624
Query: 459 AAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITM 518
A +W++ A R+ M GVRK G SW+ I +H F D + Q IYK + EI
Sbjct: 625 ACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWE 684
Query: 519 QAMQEGYKPDISELFLGIEE 538
+ + G+ PD + +EE
Sbjct: 685 EIKKMGFIPDTESVLHDLEE 704
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 190/399 (47%), Gaps = 80/399 (20%)
Query: 19 TTRQIFS-LLQIRNTTKTLF---QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKV 74
T+ + F+ +LQ K F +H QII G Y++ L+ FY +G L AH V
Sbjct: 8 TSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHV 67
Query: 75 FEKTENPSTAIWNQMIRGHARS-----------ETP--------------------EKSV 103
F++ ST WN +I G+A+ E P + ++
Sbjct: 68 FDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAI 127
Query: 104 YLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLY 163
+++ +MI + P ++T S +LS CA G ++H V+ G S V + T+L+N+Y
Sbjct: 128 WMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMY 187
Query: 164 LMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTT 223
G A+++FD M +++ +WN+L+ Y++ G + A F++MP R++VSW +
Sbjct: 188 AKCGDPV---IAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNS 244
Query: 224 MISGCAQNGKSRQALSLFNEM-RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV--E 280
MISG +Q G + +AL++F++M + D L + LSACA + L +GK IH+Y+
Sbjct: 245 MISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRA 304
Query: 281 ENFSVGREPVLVSLNNALIHMYASCGEIE------------------------------- 309
E + G ++ NALI MYA G +E
Sbjct: 305 ETETSG------AVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGN 358
Query: 310 --EAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
A +F K++ R+ V+WT+MI G+ + G +AL F
Sbjct: 359 VKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELF 397
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 182/405 (44%), Gaps = 61/405 (15%)
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFD 180
++ +L R G VH +++ G V++ NLM Y +G + A +FD
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGS---LRFAHHVFD 69
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSL 240
+MP +S SWN+L+ GY K+G+ + + ++ EMP + VSWT +I G Q G A+ +
Sbjct: 70 EMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWM 129
Query: 241 FNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE---------------NFSV 285
F +M RV Q + LS+CA L +G+ IHS+V + ++
Sbjct: 130 FAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAK 189
Query: 286 GREPVL------------VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF 333
+PV+ +S NALI +Y G+ E A F KM R+ VSW SMI+G+
Sbjct: 190 CGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGY 249
Query: 334 AKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
++QGY EAL T +LSAC++ ++ G+Q + ++
Sbjct: 250 SQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQI-----HAYILRA 304
Query: 378 RIEHYG----CMVDLFSRAGLMDEAFSLVQ-NMPMKPNDAVLGSLLLGCRIHNNAELASQ 432
E G ++ +++++G ++ A +V+ N N SLL G N + A +
Sbjct: 305 ETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPARE 364
Query: 433 VAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMG 477
+ KL + A++ Y W D + + M+ G
Sbjct: 365 IFNKL----RDRDVVAWTAMIVG-YVQNGLWNDALELFRLMVNEG 404
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI-WNQMIRGHARS 96
QIH+ I G S + L+A Y +G + A +VF+ + W MI A+
Sbjct: 430 QIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQH 489
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVH 141
++++ L+++M+ +PD TY +LS C GL +G + +
Sbjct: 490 GLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYY 534
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 177/497 (35%), Positives = 270/497 (54%), Gaps = 38/497 (7%)
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKET-EPDEYTYSFL 124
G + A +FE + S WN MI G+ ++ K++ L+ +M+ + + PDE+T + +
Sbjct: 138 GRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSV 197
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDM-- 182
LS CA G R G+QVH +L + N + L++ Y SG V AR + D
Sbjct: 198 LSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGS---VENARRIMDQSME 254
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
+V+S+ +LL+GYVK GD++ A ++F M +R+VV+WT MI G QNG++ +A+ LF
Sbjct: 255 TDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFR 314
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIH-----SYVEENFSVGREPVLVSLNNA 297
M + L A LS CA + L GK IH S +E++ SV +NA
Sbjct: 315 SMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSV---------SNA 365
Query: 298 LIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAKQGYAQEAL------------- 343
+I MYA G A +F ++ R+ T++WTSMI A+ G +EA+
Sbjct: 366 IITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEP 425
Query: 344 --LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
+T++GVLSACSH GFV+EG+++++ + I P + HY CMVDL +RAGL EA
Sbjct: 426 DRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEF 485
Query: 402 VQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAK 461
++ MP++P+ GSLL CR+H NAELA A+KL++ IDP + Y A +ANVY+A
Sbjct: 486 IRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLS-IDPNNSGAYSA-IANVYSACG 543
Query: 462 RWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAM 521
RW D A + + + VRK G SW I +H F A D + Q +Y + +
Sbjct: 544 RWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIK 603
Query: 522 QEGYKPDISELFLGIEE 538
G+ PD+ + +++
Sbjct: 604 GAGFVPDLQSVLHDVDD 620
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 195/432 (45%), Gaps = 52/432 (12%)
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
+ SG L +A VF + W M+ G R+ +++ M P ++T
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVG-CARLLF 179
+ +LS CA G +VH V+ G S V + +++N+Y G+CG A +F
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMY----GKCGDSETATTVF 116
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
+ MP RSV SWN+++ G +D A +F+ MP R++VSW MI+G QNG +AL
Sbjct: 117 ERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALK 176
Query: 240 LFNEM-RRARVGLDQVALVAALSACAEIGDLKLGKWIHSY-------------------- 278
LF+ M + + D+ + + LSACA +G++++GK +H+Y
Sbjct: 177 LFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTY 236
Query: 279 -----VEENFSVGREPVLVSLN----NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSM 329
VE + + + LN AL+ Y G++E A +F M R+ V+WT+M
Sbjct: 237 AKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAM 296
Query: 330 ITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWG 374
I G+ + G EA+ T VLS C+ +D G+Q C
Sbjct: 297 IVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQ-IHCRAIRSL 355
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVA 434
++ ++ +++R+G A + + + S+++ H E A +
Sbjct: 356 LEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLF 415
Query: 435 QKLV-AEIDPEQ 445
++++ A ++P++
Sbjct: 416 EEMLRAGVEPDR 427
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 134/296 (45%), Gaps = 39/296 (13%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
LL YV G + +A ++F N W MI G+ ++ ++++ L++ MI EP+
Sbjct: 265 LLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPN 324
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
YT + +LSVCA G+Q+H R + R
Sbjct: 325 SYTLAAVLSVCASLACLDYGKQIHCRAI------------------------------RS 354
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN-VVSWTTMISGCAQNGKSRQ 236
L + + S N+++ Y + G A ++FD++ R ++WT+MI AQ+G+ +
Sbjct: 355 LLEQSSSVS----NAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEE 410
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
A+ LF EM RA V D++ V LSAC+ G + GK + ++ + E +S
Sbjct: 411 AVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPE---MSHYA 467
Query: 297 ALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQGYAQEALLTFLGVLS 351
++ + A G EA R+M + ++W S+++ A+ A L +LS
Sbjct: 468 CMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLS 523
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 163/417 (39%), Positives = 249/417 (59%), Gaps = 34/417 (8%)
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL---LFDDMPARSVVSWNSLLKGY 197
H + + G S+ ++ N+++ Y +C VG L LFD+MP + V+ ++++ Y
Sbjct: 1 HCQAVKPGIFSHGYVANNILSRY----SKCVVGDLNLACKLFDEMPHKDTVTLDTMITAY 56
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
+ A+K+F+ MP +++V+W ++I+G A NGK +AL+L+ M V D +V
Sbjct: 57 -----FESAYKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMV 111
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
+ LSACAE+ L LG+ H Y+ VG L + NNAL+ +YA CG I EA +F +
Sbjct: 112 SLLSACAELATLVLGRRAHVYM---VKVGLNKNLHA-NNALLDLYAKCGTISEARKIFDE 167
Query: 318 MQ-RRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDE 361
M RN VSWTS+I G A G+ +EAL +TF+GVL ACSH G V+E
Sbjct: 168 MGIERNVVSWTSLIVGLAVNGFGKEALEHFKDMEREGLVPSEITFVGVLYACSHCGIVNE 227
Query: 362 GRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGC 421
G ++F+ M + + I PRIEHYGCMVDL RAGL+ EA+ +Q+MP++PN + +LL C
Sbjct: 228 GFEYFKRMKEQYDIVPRIEHYGCMVDLLGRAGLLKEAYDYIQDMPLQPNAVIWRTLLGAC 287
Query: 422 RIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKP 481
IH + L + +L+ +++P+ + Y+ L++N+YA+ +RW DV VR+ M+ GVRK
Sbjct: 288 TIHGHLGLGAFARARLL-QLEPKDSGDYV-LLSNLYASEQRWSDVHEVRRTMLSEGVRKT 345
Query: 482 PGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
PG S V++ +H+FV GD T+ Q+ IYK L E+ M+ GY P + + IEE
Sbjct: 346 PGYSLVELGNHVHEFVMGDRTHPQSEAIYKMLVEMAMKLKLAGYVPHTANVLADIEE 402
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 120/279 (43%), Gaps = 41/279 (14%)
Query: 63 VTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYS 122
+ + Y +A+KVFE WN +I G A + P +++ LYK+M + EPD +T
Sbjct: 52 MITAYFESAYKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMV 111
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDD 181
LLS CA G + H ++ G N+ L++LY +CG + AR +FD+
Sbjct: 112 SLLSACAELATLVLGRRAHVYMVKVGLNKNLHANNALLDLY----AKCGTISEARKIFDE 167
Query: 182 MP-ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSL 240
M R+VVSW T++I G A NG ++AL
Sbjct: 168 MGIERNVVSW-------------------------------TSLIVGLAVNGFGKEALEH 196
Query: 241 FNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIH 300
F +M R + ++ V L AC+ G + G ++E + + + ++
Sbjct: 197 FKDMEREGLVPSEITFVGVLYACSHCGIVNEGFEYFKRMKEQYDIVPR---IEHYGCMVD 253
Query: 301 MYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQGY 338
+ G ++EAY + M + N V W +++ G+
Sbjct: 254 LLGRAGLLKEAYDYIQDMPLQPNAVIWRTLLGACTIHGH 292
>gi|218192167|gb|EEC74594.1| hypothetical protein OsI_10176 [Oryza sativa Indica Group]
Length = 523
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 164/463 (35%), Positives = 252/463 (54%), Gaps = 53/463 (11%)
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKE----TEPDEYTY 121
G + +A+ VF++ P ++N +IRG A + P +V LY +M+ + PD+ T+
Sbjct: 26 GAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTF 85
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV--------- 172
F+L C G G QVH V+ +G S+ F++ L+ ++ S G G+
Sbjct: 86 PFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMH-ASCGNLGIAAALFDGRA 144
Query: 173 ------------GCARL--------LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDE 212
GCAR LFD+ P + +VSWN ++ Y KRGD+ A ++FD+
Sbjct: 145 REDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQ 204
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
+P R+VVSW MISG + G AL LF +M+R D V +++ LSACA+ GDL +G
Sbjct: 205 VPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVG 264
Query: 273 KWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
+ +HS + + FS PV+ L NALI MYA CG ++ A+ VF M+ ++ +W S++ G
Sbjct: 265 QRLHSSLSDMFSRNGFPVV--LGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGG 322
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
A G+ E++ +TF+ VL ACSHGG VD+GR+FF M + ++P
Sbjct: 323 LALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEP 382
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
I+HYGC+VD+ RAGL+ EAF + M +PN + +LL CR+H ELA ++L
Sbjct: 383 NIKHYGCIVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQL 442
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRK 480
+ + E +G L++N+YA+ W +R+ M GV K
Sbjct: 443 LKARNDE--SGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNK 483
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 125/281 (44%), Gaps = 36/281 (12%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
++ Y G + A ++F++ WN MI G+ R + ++ L++QM +PD
Sbjct: 185 MITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPD 244
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
T LLS CA G G+++H + S++F R
Sbjct: 245 IVTMLSLLSACADSGDLDVGQRLHSSL------SDMFSRNGF------------------ 280
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
VV N+L+ Y K G + A ++F M ++V +W +++ G A +G ++
Sbjct: 281 --------PVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLES 332
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
+ +F +M + +V D++ VA L AC+ G + G+ + ++ + V EP +
Sbjct: 333 IDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRV--EPN-IKHYGC 389
Query: 298 LIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQG 337
++ M G ++EA+ M+ N+V W ++++ G
Sbjct: 390 IVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHG 430
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 116/256 (45%), Gaps = 27/256 (10%)
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM----RRARVGLDQVA 255
RG I A+ +FD++P + + T+I G A R A+SL+ M V D++
Sbjct: 25 RGAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLT 84
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
L AC +G G +H++V G E + NALI M+ASCG + A +F
Sbjct: 85 FPFVLRACTAMGAGDTGVQVHAHV---VKAGCESDAF-VKNALIGMHASCGNLGIAAALF 140
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEA-----------LLTFLGVLSACSHGGFVDEGRQ 364
R + V+W++MITG A++G A L+++ +++A + G + R+
Sbjct: 141 DGRAREDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARE 200
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL---VQNMPMKPNDAVLGSLLLGC 421
F+ + + + + M+ + R G A L +Q M KP+ + SLL C
Sbjct: 201 LFDQVPER-----DVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSAC 255
Query: 422 RIHNNAELASQVAQKL 437
+ ++ ++ L
Sbjct: 256 ADSGDLDVGQRLHSSL 271
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 173/475 (36%), Positives = 262/475 (55%), Gaps = 27/475 (5%)
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE 138
EN +N MI G+ ++++ + ++M+ E DE+TY ++ CA L + G+
Sbjct: 247 ENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGK 306
Query: 139 QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGY 197
QVH VL S F +L+ LY +CG AR +F+ MPA+ +VSWN+LL GY
Sbjct: 307 QVHAYVLRREDFSFHF-DNSLVTLYY----KCGKFNEARAIFEKMPAKDLVSWNALLSGY 361
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
V G I A IF EM +N++SW MISG A+NG + L LF+ M+R A
Sbjct: 362 VSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFS 421
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
A+ +CA +G G+ H+ + +G + L S NALI MYA CG +EEA VFR
Sbjct: 422 GAIKSCAVLGAYCNGQQFHAQL---VKIGFDSSL-SAGNALITMYAKCGVVEEAQQVFRT 477
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEG 362
M ++VSW ++I + G+ EA+ +TFL VL+ACSH G VD+G
Sbjct: 478 MPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQG 537
Query: 363 RQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCR 422
R++F M + I P +HY ++DL R+G EA S+++++P KP + +LL GCR
Sbjct: 538 RKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCR 597
Query: 423 IHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPP 482
+H N EL A KL I PE Y+ L++N+YAA +W++VA VR+ M GV+K
Sbjct: 598 VHGNMELGIIAADKLFGLI-PEHDGTYM-LLSNMYAATGQWEEVARVRKLMRDRGVKKEV 655
Query: 483 GQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIE 537
SW+++ +H F+ D+++ +A +YK L ++ + + GY PD S + +E
Sbjct: 656 ACSWIEMETQVHTFLVDDTSHPEAEAVYKYLQDLGKEMRRLGYVPDTSFVLHDVE 710
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 185/402 (46%), Gaps = 60/402 (14%)
Query: 27 LQIRNTTKTLFQ-IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPS--- 82
L +R T+ L + +H II GF +IL +L+ Y S L A ++F++ P
Sbjct: 23 LPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIA 82
Query: 83 ------------------------------TAIWNQMIRGHARSETPEKSVYLYKQMIDK 112
T ++N MI G + + ++ L+ +M +
Sbjct: 83 RTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHE 142
Query: 113 ETEPDEYTYSFLLSVCARCGLFREGE----QVHGRVLASGYCSNVFIRTNLMNLYLMSGG 168
+PD++TY+ SV A L + E Q H L SG + L+++Y
Sbjct: 143 GFKPDDFTYA---SVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCAS 199
Query: 169 ECGV-GCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR-NVVSWTTMIS 226
+ AR +FDD+P + SW +++ GYVK G D ++ M +V++ MIS
Sbjct: 200 SPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMIS 259
Query: 227 GCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVG 286
G G ++AL + M + + LD+ + + ACA L+LGK +H+YV +
Sbjct: 260 GYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYV-----LR 314
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEA---- 342
RE +N+L+ +Y CG+ EA +F KM ++ VSW ++++G+ G+ EA
Sbjct: 315 REDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIF 374
Query: 343 -------LLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
+L+++ ++S + GF +EG + F CM + G +P
Sbjct: 375 KEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKRE-GFEP 415
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 133/306 (43%), Gaps = 46/306 (15%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
LL+ YV+SG++ A +F++ + + W MI G A + E+ + L+ M + EP
Sbjct: 357 LLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPC 416
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCAR 176
+Y +S + CA G + G+Q H +++ G+ S++ L+ +Y +CG V A+
Sbjct: 417 DYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMY----AKCGVVEEAQ 472
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
+F MP VSWN+L I+ Q+G +
Sbjct: 473 QVFRTMPCLDSVSWNAL-------------------------------IAALGQHGHGVE 501
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
A+ ++ EM + + D++ + L+AC+ G + G+ Y +V R P
Sbjct: 502 AVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGR---KYFNSMETVYRIPPGADHYA 558
Query: 297 ALIHMYASCGEIEEAYGVFRKMQRRNTVS-WTSMITGFAKQGYAQEALLTFLGVLSACSH 355
LI + G+ EA + + + T W ++++G G + LG+++A
Sbjct: 559 RLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNME------LGIIAADKL 612
Query: 356 GGFVDE 361
G + E
Sbjct: 613 FGLIPE 618
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q H+Q++ GF L+ Y G + A +VF + WN +I +
Sbjct: 438 QFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHG 497
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
++V +Y++M+ K PD T+ +L+ C+ GL +G +
Sbjct: 498 HGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRK 539
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 167/419 (39%), Positives = 242/419 (57%), Gaps = 55/419 (13%)
Query: 135 REGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLL 194
REGE+VH + +G+ S VF++ L+++Y C
Sbjct: 12 REGEKVHSIAIRNGFESLVFVQNTLVHMY--------AAC-------------------- 43
Query: 195 KGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQV 254
G + A K+F+ M RN+V+W ++I+G A NG+ +AL+LF EM V D
Sbjct: 44 ------GHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGF 97
Query: 255 ALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGV 314
+V+ LSACAE+G L LG+ H Y+ VG + L + NAL+ +YA CG I +A+ V
Sbjct: 98 TMVSLLSACAELGALALGRRAHVYM---VKVGLDGNLHA-GNALLDLYAKCGSIRQAHKV 153
Query: 315 FRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFV 359
F +M+ ++ VSWTS+I G A G+ +EAL +TF+GVL ACSH G V
Sbjct: 154 FDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMV 213
Query: 360 DEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLL 419
DEG +F+ M + +GI P+IEHYGCMVDL RAGL+ +A +QNMPM+PN V +LL
Sbjct: 214 DEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLG 273
Query: 420 GCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVR 479
C IH + L +VA+ + +++P+ + Y+ L++N+YA+ +RW DV VR+ M++ GV+
Sbjct: 274 ACTIHGHLALG-EVARAQLLQLEPKHSGDYV-LLSNLYASEQRWSDVHKVRRTMLREGVK 331
Query: 480 KPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
K PG S V++ LH+FV GD ++ Q IY L EIT EGY P IS + IEE
Sbjct: 332 KTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISNVLADIEE 390
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 141/320 (44%), Gaps = 44/320 (13%)
Query: 21 RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTEN 80
R I L+ +R K +HS I NGF ++ L+ Y G+ +AHK+FE
Sbjct: 3 RAIAKLMDVREGEK----VHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAE 58
Query: 81 PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
+ WN +I G+A + P +++ L+++M + EPD +T LLS CA G G +
Sbjct: 59 RNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRA 118
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVK 199
H ++ G N+ L++LY +CG + A +FD+M +SVVSW SL
Sbjct: 119 HVYMVKVGLDGNLHAGNALLDLY----AKCGSIRQAHKVFDEMEEKSVVSWTSL------ 168
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
I G A NG ++AL LF E+ R + ++ V
Sbjct: 169 -------------------------IVGLAVNGFGKEALELFKELERKGLMPSEITFVGV 203
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
L AC+ G + G ++E + + + + ++ + G +++A+ + M
Sbjct: 204 LYACSHCGMVDEGFDYFKRMKEEYGIVPK---IEHYGCMVDLLGRAGLVKQAHEFIQNMP 260
Query: 320 -RRNTVSWTSMITGFAKQGY 338
+ N V W +++ G+
Sbjct: 261 MQPNAVVWRTLLGACTIHGH 280
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 20/162 (12%)
Query: 262 ACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR 321
A A++ D++ G+ +HS N G E LV + N L+HMYA+CG E A+ +F M R
Sbjct: 4 AIAKLMDVREGEKVHSIAIRN---GFE-SLVFVQNTLVHMYAACGHAESAHKLFELMAER 59
Query: 322 NTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFF 366
N V+W S+I G+A G EAL T + +LSAC+ G + GR+
Sbjct: 60 NLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAH 119
Query: 367 ECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
M + G+ + ++DL+++ G + +A + M K
Sbjct: 120 VYMVK-VGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEK 160
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 169/510 (33%), Positives = 263/510 (51%), Gaps = 55/510 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+ H+ I +G + + +L Y G + A VF+ ++ WN MI G+A++
Sbjct: 182 EAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNG 241
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ L+ +M+++ + + + L C G EG +VH ++ G SNV +
Sbjct: 242 DSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSV-- 299
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
N+L+ Y K +D A +FDE+ R
Sbjct: 300 --------------------------------MNALITMYSKCKRVDLASHVFDELDRRT 327
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VSW MI GCAQNG S A+ LF M+ V D LV+ + A A+I D +WIH
Sbjct: 328 QVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHG 387
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y + ++ +++ ALI MYA CG + A +F + R+ ++W +MI G+ G
Sbjct: 388 Y-SIRLHLDQDVYVLT---ALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHG 443
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+ + A+ TFL VLSACSH G VDEGR++F M +++G++P +EHY
Sbjct: 444 FGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHY 503
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
G MVDL RAG +DEA++ +Q MPM P +V G++L C++H N ELA + AQK+ E+
Sbjct: 504 GTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIF-ELG 562
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P++ Y L+AN+YA A W+DVA VR M K G++K PG S +Q+ +H F +G +
Sbjct: 563 PQEGV-YHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTN 621
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISEL 532
++QA IY L ++ + GY PD +
Sbjct: 622 HQQAKEIYSRLAKLIEEIKAVGYVPDTDSI 651
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 151/330 (45%), Gaps = 42/330 (12%)
Query: 21 RQIFSLLQI---RNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEK 77
R SLL++ R T +H+Q+ G + L Y +A +VF++
Sbjct: 60 RTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDR 119
Query: 78 TENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETE-PDEYTYSFLLSVCARCGLFRE 136
WN ++ G+AR+ ++ + +M ++E E PD T +L CA
Sbjct: 120 MPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAA 179
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKG 196
+ H + SG V + T ++L
Sbjct: 180 CREAHAFAIRSGLEELVNVAT----------------------------------AILDA 205
Query: 197 YVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVAL 256
Y K GDI A +FD MP +N VSW MI G AQNG SR+AL+LFN M V + V++
Sbjct: 206 YCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSV 265
Query: 257 VAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFR 316
+AAL AC E+G L G +H + +G + VS+ NALI MY+ C ++ A VF
Sbjct: 266 LAALQACGELGCLDEGMRVHELL---VRIGLDSN-VSVMNALITMYSKCKRVDLASHVFD 321
Query: 317 KMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
++ RR VSW +MI G A+ G +++A+ F
Sbjct: 322 ELDRRTQVSWNAMILGCAQNGCSEDAVRLF 351
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 161/368 (43%), Gaps = 58/368 (15%)
Query: 94 ARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNV 153
ARS+ P ++ + M P T++ LL +CA G G VH ++ A G S
Sbjct: 36 ARSDLP-AALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEA 94
Query: 154 FIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
T L N+Y C R PA A ++FD M
Sbjct: 95 LAATALANMY--------AKCRR------PA--------------------DARRVFDRM 120
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR-VGLDQVALVAALSACAEIGDLKLG 272
P R+ V+W +++G A+NG +R A+ + M+ D + LV+ L ACA L
Sbjct: 121 PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAAC 180
Query: 273 KWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
+ H++ G E LV++ A++ Y CG+I A VF M +N+VSW +MI G
Sbjct: 181 REAHAFA---IRSGLEE-LVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDG 236
Query: 333 FAKQGYAQEALLTF---------------LGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
+A+ G ++EAL F L L AC G +DEG + E + + G+
Sbjct: 237 YAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVR-IGLDS 295
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
+ ++ ++S+ +D A + + + +++LGC + +E A ++ ++
Sbjct: 296 NVSVMNALITMYSKCKRVDLASHVFDELDRR-TQVSWNAMILGCAQNGCSEDAVRLFTRM 354
Query: 438 VAE-IDPE 444
E + P+
Sbjct: 355 QLENVKPD 362
>gi|225450622|ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
[Vitis vinifera]
Length = 485
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 176/483 (36%), Positives = 278/483 (57%), Gaps = 25/483 (5%)
Query: 21 RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTEN 80
R+I L R T L QIH+ I+ + Q N IL+ ++ + A+ VF +T+N
Sbjct: 10 RRILRHLHGRKTRTQLPQIHAHILRHHLHQSNQILSHFISVCGALDKMGYANLVFHQTQN 69
Query: 81 PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
P+ ++N MI+G++ E S+ L+ QM ++ PDE+T++ LL C+ R G+ V
Sbjct: 70 PNLLLFNSMIKGYSLCGPSENSLLLFSQMKNRGIWPDEFTFAPLLKSCSGICDNRIGKGV 129
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVK 199
HG V+ G+ IR +++LY CG + A+ +FD+M R V+ WN +++G+ K
Sbjct: 130 HGVVIVVGFERFSSIRIGIIDLYT----SCGRMEDAKKVFDEMLDRDVIVWNMMIRGFCK 185
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
GDI+ +++F +M R+VVSW +MI+G Q+G+ +AL LF EM D +V
Sbjct: 186 VGDIEMGFRLFRQMRDRSVVSWNSMIAGLEQSGRDGEALELFREMWDHGFEPDDATVVTI 245
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
L CA +G + +G+WIHSY E + + R+ +S+ N+L+ Y CG +E A+ VF +M
Sbjct: 246 LPVCARLGAVDVGEWIHSYAESS-RLLRD--FISVGNSLVDFYCKCGILETAWRVFNEMP 302
Query: 320 RRNTVSWTSMITGFAKQGYAQ------EALL---------TFLGVLSACSHGGFVDEGRQ 364
++N VSW +MI+G G + E ++ TF+GVLS C+H G V+ GR
Sbjct: 303 QKNVVSWNAMISGLTFNGKGELGADLFEEMINKGVRPNDATFVGVLSCCAHAGLVERGRN 362
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
F M + ++P++EH+GCMVDL +R G M+EA LV+ MPM+PN + GSLL R
Sbjct: 363 LFTSMTVDHKMEPKLEHFGCMVDLLARNGCMEEARDLVRTMPMRPNAVLWGSLLSAYRTI 422
Query: 425 NNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQ 484
+ + A ++L+ E++P + Y+ L++NVYA +W +V VR M + +RK PGQ
Sbjct: 423 GDVKHAECAVKELI-ELEPWNSGNYV-LLSNVYAEDGKWDEVEKVRALMKEKNIRKNPGQ 480
Query: 485 SWV 487
S V
Sbjct: 481 SMV 483
>gi|357466867|ref|XP_003603718.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355492766|gb|AES73969.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 629
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 174/507 (34%), Positives = 279/507 (55%), Gaps = 34/507 (6%)
Query: 32 TTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKTENPSTAIWNQM 89
T K QIH+ I N ++ +YI +++LAF+ S G A +F NP+ +N +
Sbjct: 36 TMKQTKQIHAHAIANNLTRFSYISSRILAFFAASPRGDFRYAETLFTHMPNPNIFDYNSI 95
Query: 90 IRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGY 149
I + + +KS+ ++ +M++ P+ +T++ L+ C EQV + SG
Sbjct: 96 ITSYTTNSQFDKSLSVFTKMLNMNIRPNSHTFTTLVKSCVTLSSL---EQVFTLTMKSGN 152
Query: 150 CSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKI 209
S+V+ ++++N++ G + AR +FD+ R+VV W SL+ GY G ++ +
Sbjct: 153 SSDVYFVSSVINVFSKHGA---IHLARQVFDESSNRNVVCWTSLVSGYCSCGLVNEVRDV 209
Query: 210 FDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR-----RARVGLDQVALVAALSACA 264
FD+MP RN S + M+SG +N + + LF E++ RARV + LV+ L+AC
Sbjct: 210 FDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGALLVSVLNACT 269
Query: 265 EIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTV 324
+G + GKWIHSYVEEN G E L L ALI YA CG +++A VF KM ++
Sbjct: 270 VMGAFEEGKWIHSYVEEN---GLEYDL-ELGTALIDFYAKCGWVKDAEKVFDKMLVKDVA 325
Query: 325 SWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECM 369
+W++MI G A G + AL +TF+GVL+AC+H E + F M
Sbjct: 326 TWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESSRLFGIM 385
Query: 370 NQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAEL 429
++ + I P IEHYGC+VD+ +R+G + +A + +M ++P+ A+ GSLL GC +H + EL
Sbjct: 386 SEKYNITPSIEHYGCIVDILARSGQVKKALIFINSMHIEPDGAIWGSLLNGCLMHGHYEL 445
Query: 430 ASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQI 489
+V + L+ E DPE + Y+ L+AN+YA +W+ V+ VR+ M GV G S+++I
Sbjct: 446 GQKVGKYLI-EFDPEHSGRYV-LLANMYANMGKWEGVSEVRKLMKDRGVVIVYGWSFIEI 503
Query: 490 NGVLHDFVAGDSTYKQASLIYKTLGEI 516
+ LH F A D + IY+ L +
Sbjct: 504 DQTLHKFSADDKCCLYSGEIYEVLSHL 530
>gi|90657651|gb|ABD96949.1| hypothetical protein [Cleome spinosa]
Length = 639
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 173/502 (34%), Positives = 290/502 (57%), Gaps = 37/502 (7%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H ++ +GF + ++ Y G + A KVF++ WN +I +
Sbjct: 137 KVHGYVVKSGFDA--CVCNSVMGMYGALGKMEVAKKVFDEIPERDVVSWNVLISSYVGHR 194
Query: 98 TPEKSVYLYKQMI-DKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
E ++ ++++M + + DE T LS C+ GE++H R + + I
Sbjct: 195 KFEDAIAVFRRMRRESNLKADEATVVSTLSACSVLRNQEVGEEIH-RYVDAELEMTTKIG 253
Query: 157 TNLMNLYLMSGGECGVGC---ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
L+++Y C GC AR +FD+M ++V+ W S++ GY G +D A ++F+
Sbjct: 254 NALLDMY------CKCGCVDKARAIFDEMGNKNVICWTSMVSGYASNGSLDEARELFERS 307
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK 273
P R++V WT MI+G Q +AL LF +M+ R+ D LV L CA+ G L+ GK
Sbjct: 308 PVRDIVLWTAMINGYVQFNLFDEALKLFRKMQIQRLRPDNFILVTLLKGCAQTGALEQGK 367
Query: 274 WIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF 333
W+H Y+ EN S+ + V + AL+ +YA CG +E+A VF +M+ R+T SWTS+I G
Sbjct: 368 WLHGYIHEN-SITLDRV---VGTALVDVYAKCGCVEKALEVFYEMKERDTASWTSVIYGL 423
Query: 334 AKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
A G +AL +TF+GVL+AC+HGG V+EGR++F+ M + + I+P+
Sbjct: 424 AVNGMTSKALDFFSQMEEAGFRPDDITFIGVLTACNHGGLVEEGRRYFDSMTKTYKIQPK 483
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLG---SLLLGCRIHNNAELASQVAQ 435
EHY C++DL RAGL+DEA L++ +P++ +D V+ SLL CR + N +++ +V +
Sbjct: 484 SEHYSCLIDLLCRAGLLDEAELLLEMIPIESSDIVVPLYCSLLSACRNYGNLKMSERVGR 543
Query: 436 KLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHD 495
+L ++ + ++ + L+A+VYA+A RW+DV VR+KM ++G+RK PG S +++NGVLH+
Sbjct: 544 RL-ERVEVKDSSVH-TLLASVYASANRWEDVTTVRRKMKELGIRKFPGCSSIEVNGVLHE 601
Query: 496 FVAGDSTYKQASLIYKTLGEIT 517
F+ G ++ + I+ LG++T
Sbjct: 602 FMVGGPSHMEMDDIHSVLGQVT 623
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 187/410 (45%), Gaps = 72/410 (17%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV--TSGYLINAHKVF 75
L+ LLQ + L QIH++I G L K++ F + G + A +V
Sbjct: 14 LSKNYCVDLLQSCESMAHLTQIHAKIFRVGLQDNMDTLTKIVLFCTDPSRGSIRYAERVL 73
Query: 76 EKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFR 135
++P ++N MI+ A+ E K + L+ ++ + PD +T + G
Sbjct: 74 GFVQSPCLVMYNLMIKAVAKDENFRKVLVLFSELRKQGLNPDNFTLPPVFKAMGCLGKVV 133
Query: 136 EGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLK 195
EGE+VHG V+ SG+ + + ++M +Y G + A+ +FD++P R VVSWN L+
Sbjct: 134 EGEKVHGYVVKSGF--DACVCNSVMGMY---GALGKMEVAKKVFDEIPERDVVSWNVLIS 188
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR-ARVGLDQV 254
YV HR K A+++F MRR + + D+
Sbjct: 189 SYVG---------------HR----------------KFEDAIAVFRRMRRESNLKADEA 217
Query: 255 ALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGV 314
+V+ LSAC+ + + ++G+ IH YV+ + + NAL+ MY CG +++A +
Sbjct: 218 TVVSTLSACSVLRNQEVGEEIHRYVDAELE-----MTTKIGNALLDMYCKCGCVDKARAI 272
Query: 315 FRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWG 374
F +M +N + WTSM++G+A G +DE R+ FE
Sbjct: 273 FDEMGNKNVICWTSMVSGYASNGS--------------------LDEARELFE-----RS 307
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP---MKPNDAVLGSLLLGC 421
I + M++ + + L DEA L + M ++P++ +L +LL GC
Sbjct: 308 PVRDIVLWTAMINGYVQFNLFDEALKLFRKMQIQRLRPDNFILVTLLKGC 357
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 177/497 (35%), Positives = 270/497 (54%), Gaps = 38/497 (7%)
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKET-EPDEYTYSFL 124
G + A +FE + S WN MI G+ ++ K++ L+ +M+ + + PDE+T + +
Sbjct: 244 GRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSV 303
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDM-- 182
LS CA G R G+QVH +L + N + L++ Y SG V AR + D
Sbjct: 304 LSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGS---VENARRIMDQSME 360
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
+V+S+ +LL+GYVK GD++ A ++F M +R+VV+WT MI G QNG++ +A+ LF
Sbjct: 361 TDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFR 420
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIH-----SYVEENFSVGREPVLVSLNNA 297
M + L A LS CA + L GK IH S +E++ SV +NA
Sbjct: 421 SMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSV---------SNA 471
Query: 298 LIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAKQGYAQEAL------------- 343
+I MYA G A +F ++ R+ T++WTSMI A+ G +EA+
Sbjct: 472 IITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEP 531
Query: 344 --LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
+T++GVLSACSH GFV+EG+++++ + I P + HY CMVDL +RAGL EA
Sbjct: 532 DRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEF 591
Query: 402 VQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAK 461
++ MP++P+ GSLL CR+H NAELA A+KL++ IDP + Y A +ANVY+A
Sbjct: 592 IRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLS-IDPNNSGAYSA-IANVYSACG 649
Query: 462 RWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAM 521
RW D A + + + VRK G SW I +H F A D + Q +Y + +
Sbjct: 650 RWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIK 709
Query: 522 QEGYKPDISELFLGIEE 538
G+ PD+ + +++
Sbjct: 710 GAGFVPDLQSVLHDVDD 726
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 198/435 (45%), Gaps = 52/435 (11%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
LL+ + SG L +A VF + W M+ G R+ +++ M P
Sbjct: 104 LLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPT 163
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVG-CAR 176
++T + +LS CA G +VH V+ G S V + +++N+Y G+CG A
Sbjct: 164 QFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMY----GKCGDSETAT 219
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
+F+ MP RSV SWN+++ G +D A +F+ MP R++VSW MI+G QNG +
Sbjct: 220 TVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAK 279
Query: 237 ALSLFNEM-RRARVGLDQVALVAALSACAEIGDLKLGKWIHSY----------------- 278
AL LF+ M + + D+ + + LSACA +G++++GK +H+Y
Sbjct: 280 ALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALI 339
Query: 279 --------VEENFSVGREPVLVSLN----NALIHMYASCGEIEEAYGVFRKMQRRNTVSW 326
VE + + + LN AL+ Y G++E A +F M R+ V+W
Sbjct: 340 STYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAW 399
Query: 327 TSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQ 371
T+MI G+ + G EA+ T VLS C+ +D G+Q C
Sbjct: 400 TAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQ-IHCRAI 458
Query: 372 NWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELAS 431
++ ++ +++R+G A + + + S+++ H E A
Sbjct: 459 RSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAV 518
Query: 432 QVAQKLV-AEIDPEQ 445
+ ++++ A ++P++
Sbjct: 519 GLFEEMLRAGVEPDR 533
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 149/320 (46%), Gaps = 36/320 (11%)
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLY-LMSGGECGVGCARLLF 179
Y+ LL +C G +H R + +G ++ ++ NL++ Y +GG G+ AR LF
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 180 DDMP--ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
D++P R+V +WNSLL + K G + A +F EMP R+ VSWT M+ G + G+ +A
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
+ +M Q L LS+CA +G+ +HS+V + +G V + N+
Sbjct: 149 IKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVK-LGLGS---CVPVANS 204
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGG 357
+++MY CG+ E A VF +M R+ SW +M+ S +H G
Sbjct: 205 VLNMYGKCGDSETATTVFERMPVRSVSSWNAMV--------------------SLNTHLG 244
Query: 358 FVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM----PMKPNDAV 413
+D FE M I + M+ +++ GL +A L M M P++
Sbjct: 245 RMDLAESLFESMPDR-----SIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFT 299
Query: 414 LGSLLLGCRIHNNAELASQV 433
+ S+L C N + QV
Sbjct: 300 ITSVLSACANLGNVRIGKQV 319
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 134/296 (45%), Gaps = 39/296 (13%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
LL YV G + +A ++F N W MI G+ ++ ++++ L++ MI EP+
Sbjct: 371 LLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPN 430
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
YT + +LSVCA G+Q+H R + R
Sbjct: 431 SYTLAAVLSVCASLACLDYGKQIHCRAI------------------------------RS 460
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN-VVSWTTMISGCAQNGKSRQ 236
L + + S N+++ Y + G A ++FD++ R ++WT+MI AQ+G+ +
Sbjct: 461 LLEQSSSVS----NAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEE 516
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
A+ LF EM RA V D++ V LSAC+ G + GK + ++ + E +S
Sbjct: 517 AVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPE---MSHYA 573
Query: 297 ALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQGYAQEALLTFLGVLS 351
++ + A G EA R+M + ++W S+++ A+ A L +LS
Sbjct: 574 CMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLS 629
>gi|357477567|ref|XP_003609069.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510124|gb|AES91266.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 611
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 185/546 (33%), Positives = 290/546 (53%), Gaps = 54/546 (9%)
Query: 23 IFSLLQIRNTT-KTLFQIHSQIIINGFSQKNYILAKLL---AFYVTSGYLINAHKVFEKT 78
+ SLL NTT KT QIH+ + + G + KLL A ++ L + ++F
Sbjct: 12 LLSLLSNCNTTLKTTKQIHTHLYVTGLHTHPFFFGKLLLNCAVSISDHVLNYSLRLFHHF 71
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETE-PDEYTYSFLLSVCARCGLF-RE 136
NP T ++N +IR + S TP S+ + Q++ T PD ++++F L A G R+
Sbjct: 72 PNPDTFMYNTLIRSLSHSSTPLSSLQPFIQLLRHPTLLPDSFSFAFTLKGIANDGCSKRQ 131
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV-GCARLLFDDMPARSVVSWNSLLK 195
G Q+H G+ ++F+ T L+++Y ECG AR +FD+M +VV+WN+++
Sbjct: 132 GIQLHSHAFRHGFDDHIFVGTTLISMY----AECGCYEYARKVFDEMSQPNVVAWNAVVT 187
Query: 196 GYVKRG-----DIDGAWK--IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR 248
+ G + W+ +F EM R+ SW+TMI G A++G A F E+ R R
Sbjct: 188 ACFRCGMWRVLGVSFGWREVVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDR 247
Query: 249 VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEI 308
+V+L LSACA+ G + GK +H ++E+ + +VS+NNALI Y+ CG +
Sbjct: 248 NRPSEVSLTGVLSACAQAGAFEFGKILHGFMEKAGFL----CIVSVNNALIDTYSKCGNV 303
Query: 309 EEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSAC 353
+ A VF A G A EA+ +TF+ +L AC
Sbjct: 304 DMAKLVFN--------------ISLAMHGRADEAIRVFHEMEESGVRPDGVTFISLLYAC 349
Query: 354 SHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAV 413
SH G V++G F M +GI+P IEHYGCMVDL+ RA + +A+ ++ MP+ PN +
Sbjct: 350 SHSGLVEQGCALFSKMRNFYGIEPAIEHYGCMVDLYGRAARLQKAYEFIRQMPILPNVII 409
Query: 414 LGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKM 473
+LL C IH N ELA V +L AE+DP + ++ L++NVYA A +W+DVA +R+ M
Sbjct: 410 WRTLLGACSIHGNIELAELVKARL-AEMDPNNSGDHV-LLSNVYAVAGKWKDVAGIRRTM 467
Query: 474 IKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAM-QEGYKPDISEL 532
I+ ++K PG S ++I+ V + FVAG+ + + L EI ++ +EGY P + +
Sbjct: 468 IEQSMKKIPGWSMIEIDKVNYGFVAGEKPNEVTKEAHDKLREIMLRLREEEGYAPQVRSV 527
Query: 533 FLGIEE 538
+EE
Sbjct: 528 LHDVEE 533
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 165/504 (32%), Positives = 279/504 (55%), Gaps = 56/504 (11%)
Query: 41 SQIIINGFSQKNYILAK-LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
+++I +G K+ I L++ Y SG ++ A ++F+K + S WN MI +A++
Sbjct: 150 AELIFDGILVKDTIAYNCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDY 209
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
K ++++M D+ EP+E T + +LS+CA+ G G ++ SN+ + T
Sbjct: 210 HKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVST-- 267
Query: 160 MNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVV 219
++L+ YVK G +D +FD M R+VV
Sbjct: 268 --------------------------------AMLEMYVKCGAVDDGRLVFDHMARRDVV 295
Query: 220 SWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV 279
+W+ MI+G AQNG+S +AL LF M+ A++ + V LV+ LSACA++G ++ G+ I SYV
Sbjct: 296 TWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYV 355
Query: 280 EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYA 339
E + V + +AL+ MY+ CG I +A +F K+ +R+ V+W SMI G A G+A
Sbjct: 356 ESRGLISN----VYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFA 411
Query: 340 QEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGC 384
++A+ +TF+G+++AC+H G V+ G +FF M + I P IEH+ C
Sbjct: 412 EDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFAC 471
Query: 385 MVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPE 444
+VDLF R+G + +A+ + M ++PN + G+LL RIH N ELA +KL+ E++P+
Sbjct: 472 IVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLL-ELEPD 530
Query: 445 QAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYK 504
+ Y+ L +N+YA+A RWQ+ VR+ M V+K SWV++ +H F+ GD+++
Sbjct: 531 NSGNYVIL-SNIYASAGRWQEALKVRKLMKDKRVQKAAAYSWVEVEDRVHKFLVGDTSHP 589
Query: 505 QASLIYKTLGEITMQAMQEGYKPD 528
++ +Y T+ + + + GY+ D
Sbjct: 590 RSDEVYSTIDGLALLSTWVGYELD 613
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 208/425 (48%), Gaps = 28/425 (6%)
Query: 21 RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTEN 80
R + LL L QI + III S + +LL + ++ A +VF++ +
Sbjct: 3 RYLIDLLHCSLPINQLKQIQALIIIKYLSLTPLFIRRLL----NASFIQYARQVFDQIPH 58
Query: 81 PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
P + I ++R +++ + M +T + CA G+QV
Sbjct: 59 PDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKSCASLLAIDVGKQV 118
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKR 200
H V+ G+ S+VF + L+N Y +G A L+FD + + +++N L+ Y +
Sbjct: 119 HSLVIRYGFHSSVFCQNALINFYAKIN---DLGSAELIFDGILVKDTIAYNCLISAYSRS 175
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
G++ A ++FD+M R++VSW MIS AQNG + +F M+ +++ L L
Sbjct: 176 GEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVL 235
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
S CA++GDL++G I + +N ++G + ++ A++ MY CG +++ VF M R
Sbjct: 236 SICAKLGDLEMGLRIKK-LNDNKNLGSNMI---VSTAMLEMYVKCGAVDDGRLVFDHMAR 291
Query: 321 RNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQF 365
R+ V+W++MI G+A+ G + EAL +T + VLSAC+ G V+ G +
Sbjct: 292 RDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERI 351
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHN 425
+ ++ G+ + ++ ++S+ G + +A + +P + N S+++G I+
Sbjct: 352 GSYV-ESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDN-VTWNSMIMGLAING 409
Query: 426 NAELA 430
AE A
Sbjct: 410 FAEDA 414
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+I S + G Y+ + LL Y G +I A ++F+K WN MI G A +
Sbjct: 350 RIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAING 409
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCG 132
E ++ LY +M + E +P+ T+ L++ C G
Sbjct: 410 FAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAG 444
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 171/531 (32%), Positives = 274/531 (51%), Gaps = 57/531 (10%)
Query: 25 SLLQIRNTTKTLF---QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENP 81
SLLQ +K L Q+H+Q G + + KL+ Y S L+NA +F+K
Sbjct: 52 SLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQ 111
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVH 141
+ +WN +IRG+A + + ++ LY +M+D PD +T F+L C+ EG +H
Sbjct: 112 NLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIH 171
Query: 142 GRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRG 201
V+ SG+ ++F+ L+++Y G C + R +FD + R V WNS+L Y
Sbjct: 172 EYVIKSGWERDLFVGAALIDMYAKCG--CVMDAGR-VFDKIVVRDAVLWNSMLAAY---- 224
Query: 202 DIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALS 261
AQNG +++SL EM V + LV +S
Sbjct: 225 ---------------------------AQNGHPDESISLCREMAANGVRPTEATLVTVIS 257
Query: 262 ACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR 321
+ A++ L G+ IH + + + V ALI MYA CG ++ A +F +++ +
Sbjct: 258 SSADVACLPYGREIHGFGWRHGFQSNDKV----KTALIDMYAKCGSVKVALALFERLREK 313
Query: 322 NTVSWTSMITGFAKQGYAQEAL--------------LTFLGVLSACSHGGFVDEGRQFFE 367
VSW ++ITG+A G A AL +TF+GVL+ACS G +DEGR +
Sbjct: 314 RVVSWNAIITGYAMHGLAVGALDLFDKMRKEDRPDHITFVGVLAACSRGRLLDEGRALYN 373
Query: 368 CMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNA 427
M +++GI P ++HY CM+DL G +DEA+ L++NM +KP+ V G+LL C+IH N
Sbjct: 374 LMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNV 433
Query: 428 ELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWV 487
ELA +KL+ E++P+ + Y+ L AN+YA + +W+ V +RQ MI ++K SW+
Sbjct: 434 ELAELALEKLI-ELEPDDSGNYVIL-ANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWI 491
Query: 488 QINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++ ++ F+AGD ++ + IY L + + GY PD +F +EE
Sbjct: 492 EVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVEE 542
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 145/343 (42%), Gaps = 55/343 (16%)
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
Y Y+ LL C G+Q+H + G N + T L++LY +S AR
Sbjct: 47 HYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLN---ARN 103
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
LFD +P +++ WN L++GY AW NG A
Sbjct: 104 LFDKIPKQNLFLWNVLIRGY--------AW-----------------------NGPHDNA 132
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
+ L+++M + D L L AC+ + + G+ IH YV ++ G E L + A
Sbjct: 133 IILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKS---GWERDLF-VGAA 188
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------------- 343
LI MYA CG + +A VF K+ R+ V W SM+ +A+ G+ E++
Sbjct: 189 LIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPT 248
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
T + V+S+ + + GR+ G + + ++D++++ G + A +L
Sbjct: 249 EATLVTVISSSADVACLPYGRE-IHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALF 307
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQ 445
+ + K +++ G +H A A + K+ E P+
Sbjct: 308 ERLREK-RVVSWNAIITGYAMHGLAVGALDLFDKMRKEDRPDH 349
>gi|242067301|ref|XP_002448927.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
gi|241934770|gb|EES07915.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
Length = 572
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 260/483 (53%), Gaps = 26/483 (5%)
Query: 47 GFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLY 106
G ++ L+ Y G + +A KVF+ W M+ + ++ ++++ +
Sbjct: 100 GSLDDGFVRTALVGAYAACGCVGDARKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLQF 159
Query: 107 KQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMS 166
+M + D+ + +LS C R G+ +H +L S N + + L+NLY
Sbjct: 160 AKMKNSGVLSDQLILATVLSACGHIRHLRTGKSIHSYMLVSDILINAHLSSALINLY--- 216
Query: 167 GGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMI 225
C + A L++ MP + +VS +++ GY + + A IFD MP ++VVSW+ MI
Sbjct: 217 -ASCASMEMAEKLYNGMPRKDLVSSTAMVFGYARNRKFEIARYIFDGMPEKDVVSWSAMI 275
Query: 226 SGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSV 285
SG A + + +ALSLFN+M+ + D+V +++ +SACA +G L KWIH++++ N
Sbjct: 276 SGYADSNQPNEALSLFNDMQECGIRPDEVTMLSVISACANLGSLDKAKWIHAFIKNN--- 332
Query: 286 GREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-- 343
G +L + NALI M+A CG I A +F +M ++N ++WTSMIT FA G + AL
Sbjct: 333 GLNKIL-HICNALIDMFAKCGGINLALNIFNEMPQKNVITWTSMITAFAMHGDGKSALCL 391
Query: 344 -------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFS 390
+TFL +L AC H G V EGR F M Q +GI+P+ EHYGCMVDL
Sbjct: 392 FEQMRNEGVEPNEVTFLNLLYACCHAGLVHEGRSLFSSMVQQYGIEPKHEHYGCMVDLLG 451
Query: 391 RAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYL 450
RA LM EA +L+++M ++PN V GSLL C +H + +L + A+K++ ++DP G
Sbjct: 452 RAKLMQEAVNLIESMHLRPNVPVWGSLLAACWMHGDLKLGAFAAKKIL-QLDPNH-DGAS 509
Query: 451 ALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIY 510
L++ +Y + D VR M GV K G SW+ +N H+F AG Y + I+
Sbjct: 510 VLLSKIYMKSDNLNDAQEVRDVMKLQGVSKETGLSWMDLNEPFHEFTAGGEKYPENDKIF 569
Query: 511 KTL 513
+ L
Sbjct: 570 QKL 572
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 124/309 (40%), Gaps = 71/309 (22%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGH 93
+T IHS ++++ ++ + L+ Y + + A K++ M+ G+
Sbjct: 188 RTGKSIHSYMLVSDILINAHLSSALINLYASCASMEMAEKLYNGMPRKDLVSSTAMVFGY 247
Query: 94 ARSETPEKSVYLYKQMIDKET-------------------------------EPDEYTYS 122
AR+ E + Y++ M +K+ PDE T
Sbjct: 248 ARNRKFEIARYIFDGMPEKDVVSWSAMISGYADSNQPNEALSLFNDMQECGIRPDEVTML 307
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDM 182
++S CA G + + +H + +G + I L++++ G G+ A +F++M
Sbjct: 308 SVISACANLGSLDKAKWIHAFIKNNGLNKILHICNALIDMFAKCG---GINLALNIFNEM 364
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV----VSWTTMISGCAQNGKSRQAL 238
P ++V++W S++ + GD A +F++M + V V++ ++ C G +
Sbjct: 365 PQKNVITWTSMITAFAMHGDGKSALCLFEQMRNEGVEPNEVTFLNLLYACCHAGLVHEGR 424
Query: 239 SLFNEM--------------------RRARVGLDQVALVAA-------------LSACAE 265
SLF+ M RA++ + V L+ + L+AC
Sbjct: 425 SLFSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAVNLIESMHLRPNVPVWGSLLAACWM 484
Query: 266 IGDLKLGKW 274
GDLKLG +
Sbjct: 485 HGDLKLGAF 493
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 165/500 (33%), Positives = 271/500 (54%), Gaps = 60/500 (12%)
Query: 53 YILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDK 112
+++ L+ YV G L +A VF+K + + W MI ++ ++ +K++ M+ +
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60
Query: 113 ETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV 172
P+ +TYS +L C GLF Q+H ++ G S+VF+R+ L+++Y
Sbjct: 61 GVRPNMFTYSSVLRACD--GLFNL-RQLHCCIIKIGLDSDVFVRSALIDVY--------- 108
Query: 173 GCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNG 232
W G+++ A ++FDEM ++V W+++I+G AQN
Sbjct: 109 ---------------SRW----------GELENALRVFDEMVTGDLVVWSSIIAGFAQNS 143
Query: 233 KSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLV 292
+AL LF M+RA Q L + L AC + L+LG+ +H +V + + L+
Sbjct: 144 DGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHV-----LKYDQDLI 198
Query: 293 SLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------- 343
LNNAL+ MY CG +E+A VF +M ++ +SW++MI G A+ GY++EAL
Sbjct: 199 -LNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVL 257
Query: 344 ------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDE 397
+T +GVL ACSH G V+EG +F M + +GI P EHYGCM+DL RAG + E
Sbjct: 258 GIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSE 317
Query: 398 AFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVY 457
A L+ M +P+ +LL CR+H N ++A A++++ +DP+ A Y+ L++N+Y
Sbjct: 318 AVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQIL-RLDPQDAGTYV-LLSNIY 375
Query: 458 AAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEIT 517
A +RW DVA VR+ M G++K PG SW++++ +H F+ GD ++ Q I L ++
Sbjct: 376 ANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGDRSHPQIREINIQLNQLI 435
Query: 518 MQAMQEGYKPDISELFLGIE 537
+ M GY PD + + +E
Sbjct: 436 YKLMGVGYVPDTNFVLQDLE 455
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 137/311 (44%), Gaps = 44/311 (14%)
Query: 25 SLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTA 84
S+L+ + L Q+H II G ++ + L+ Y G L NA +VF++
Sbjct: 71 SVLRACDGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLV 130
Query: 85 IWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRV 144
+W+ +I G A++ ++++ L+K+M + T + +L C L G QVH V
Sbjct: 131 VWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHV 190
Query: 145 LASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDID 204
L Y ++ + L+++Y G + A +F M + V+SW++++
Sbjct: 191 LK--YDQDLILNNALLDMYCKCG---SLEDANAVFVRMVEKDVISWSTMI---------- 235
Query: 205 GAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACA 264
+G AQNG S++AL LF M+ + + V +V L AC+
Sbjct: 236 ---------------------AGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACS 274
Query: 265 EIGDLKLGKWIHSYVEENFSV--GREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RR 321
G ++ G + ++E F + GRE +I + G + EA + +M+
Sbjct: 275 HAGLVEEGLYYFHSMKELFGIDPGREHY-----GCMIDLLGRAGRLSEAVDLINEMECEP 329
Query: 322 NTVSWTSMITG 332
+ V+W +++
Sbjct: 330 DAVTWRALLNA 340
>gi|224139652|ref|XP_002323212.1| predicted protein [Populus trichocarpa]
gi|222867842|gb|EEF04973.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 170/530 (32%), Positives = 274/530 (51%), Gaps = 59/530 (11%)
Query: 23 IFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKTEN 80
I ++LQ N L +I + +I+NG I +L F S G L A +F N
Sbjct: 12 ILTVLQGCNNLTRLKKIQAHVIVNGLQNHPAISNSILNFCAVSISGSLPYAQHLFRHILN 71
Query: 81 PSTAIWNQMIRGHARSETPEKSVYLYKQMI-DKETEPDEYTYSFLLSVCARCGLFREGEQ 139
P T WN +IRG A+S +P ++++ Y +M+ D + PD +T+SF L C R ++ E+
Sbjct: 72 PQTQAWNSIIRGFAQSPSPVQAIFYYNRMLFDSVSGPDTFTFSFTLKACERIKALKKCEE 131
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVK 199
VHG ++ +GY R VV L++ Y +
Sbjct: 132 VHGSIIRTGY----------------------------------ERDVVVCTGLVRCYGR 157
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
G ++ A +FD MP R++V+W MIS +Q G ++AL +++ MR VG+D LV
Sbjct: 158 NGCVEIARMVFDNMPERDLVAWNAMISCYSQAGYHQEALRVYDYMRNENVGVDGFTLVGL 217
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
LS+C+ +G L +G +H E + V + NALI MYA CG ++ A VF M
Sbjct: 218 LSSCSHVGALNMGVKLHRIASEKGLLRN----VFVGNALIDMYAKCGSLDGALEVFNGMP 273
Query: 320 RRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQ 364
R + +W SMI GF G+ EA+ + FLG+L CSH G V+EG +
Sbjct: 274 R-DAFTWNSMIVGFGVHGFGDEAIYFFNQMLEAGVRPNSIAFLGLLCGCSHQGLVEEGVE 332
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
FF M+ + +KP I+HYGC+VD++ RAG +++A ++ + P + + + LL +IH
Sbjct: 333 FFHQMSSKFNVKPGIKHYGCIVDMYGRAGKLEKALEIIGDSPWQDDPVLWRILLSSSKIH 392
Query: 425 NNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQ 484
N + ++A + ++++ AG L+A +YA A Q VA +R+ + K G++ PG
Sbjct: 393 KNVVIG-EIAMRNLSQLGAVN-AGDCVLLATIYAGANDEQGVARMRKLIKKQGIKTTPGW 450
Query: 485 SWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFL 534
SW++++ +H FV D ++ + +IY+ L E+T +A GY D S+
Sbjct: 451 SWIEVSDQVHRFVVDDKSHPDSEMIYQKLEEVTHKATMAGYVEDKSQFIF 500
>gi|356567012|ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g44880-like [Glycine max]
Length = 599
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 201/588 (34%), Positives = 288/588 (48%), Gaps = 104/588 (17%)
Query: 21 RQIFSLLQIRN-TTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYL----------I 69
R +LQ R + TL QIH+ I+ + L L AF T L I
Sbjct: 17 RTCLHILQCRTKSIPTLLQIHAFILRHSLHSN---LNLLTAFVTTCASLAASAKRPLAII 73
Query: 70 N-AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKET--EPDEYTYSFLLS 126
N A + F T T + N MI H + + L++ + + PD YT++ L+
Sbjct: 74 NHARRFFNATHTRDTFLCNSMIAAHFAARQFSQPFTLFRDLRRQAPPFTPDGYTFTALVK 133
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARS 186
CA EG +HG VL +G C ++++ T L+++Y+ G +G AR +FD+M RS
Sbjct: 134 GCATRVATGEGTLLHGMVLKNGVCFDLYVATALVDMYVKFGV---LGSARKVFDEMSVRS 190
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMP-------------------------------H 215
VSW +++ GY + GD+ A ++FDEM
Sbjct: 191 KVSWTAVIVGYARCGDMSEARRLFDEMEDRDIVAFNAMIDGYVKMGCVGLARELFNEMRE 250
Query: 216 RNVVSWTTMISG-CA------------------------------QNGKSRQALSLFNEM 244
RNVVSWT+M+SG C QN +S AL LF EM
Sbjct: 251 RNVVSWTSMVSGYCGNGDVENAKLMFDLMPEKNVFTWNAMIGGYCQNRRSHDALELFREM 310
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYAS 304
+ A V ++V +V L A A++G L LG+WIH + + R + ALI MYA
Sbjct: 311 QTASVEPNEVTVVCVLPAVADLGALDLGRWIHRFALRK-KLDRSA---RIGTALIDMYAK 366
Query: 305 CGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGV 349
CGEI +A F M R T SW ++I GFA G A+EAL +T +GV
Sbjct: 367 CGEITKAKLAFEGMTERETASWNALINGFAVNGCAKEALEVFARMIEEGFGPNEVTMIGV 426
Query: 350 LSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKP 409
LSAC+H G V+EGR++F M + +GI P++EHYGCMVDL RAG +DEA +L+Q MP
Sbjct: 427 LSACNHCGLVEEGRRWFNAM-ERFGIAPQVEHYGCMVDLLGRAGCLDEAENLIQTMPYDA 485
Query: 410 NDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAV 469
N +L S L C N+ A +V +++V ++D E AG ++ N+YA +RW DV V
Sbjct: 486 NGIILSSFLFACGYFNDVLRAERVLKEVV-KMD-EDVAGNYVMLRNLYATRQRWTDVEDV 543
Query: 470 RQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEIT 517
+Q M K G K S ++I G +F AGD + +I TLG+++
Sbjct: 544 KQMMKKRGTSKEVACSVIEIGGSFIEFAAGDYLHSHLEVIQLTLGQLS 591
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 169/510 (33%), Positives = 263/510 (51%), Gaps = 55/510 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+ H+ I +G + + +L Y G + A VF+ ++ WN MI G+A++
Sbjct: 182 EAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNG 241
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ L+ +M+++ + + + L C G EG +VH ++ G SNV +
Sbjct: 242 DSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSV-- 299
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
N+L+ Y K +D A +FDE+ R
Sbjct: 300 --------------------------------MNALITMYSKCKRVDLASHVFDELDRRT 327
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VSW MI GCAQNG S A+ LF M+ V D LV+ + A A+I D +WIH
Sbjct: 328 QVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHG 387
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y + ++ +++ ALI MYA CG + A +F + R+ ++W +MI G+ G
Sbjct: 388 Y-SIRLHLDQDVYVLT---ALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHG 443
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+ + A+ TFL VLSACSH G VDEGR++F M +++G++P +EHY
Sbjct: 444 FGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHY 503
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
G MVDL RAG +DEA++ +Q MPM P +V G++L C++H N ELA + AQK+ E+
Sbjct: 504 GTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIF-ELG 562
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P++ Y L+AN+YA A W+DVA VR M K G++K PG S +Q+ +H F +G +
Sbjct: 563 PQEGV-YHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTN 621
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISEL 532
++QA IY L ++ + GY PD +
Sbjct: 622 HQQAKEIYSRLAKLIEEIKAVGYVPDTDSI 651
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 151/330 (45%), Gaps = 42/330 (12%)
Query: 21 RQIFSLLQI---RNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEK 77
R SLL++ R T +H+Q+ G + L Y +A +VF++
Sbjct: 60 RTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDR 119
Query: 78 TENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETE-PDEYTYSFLLSVCARCGLFRE 136
WN ++ G+AR+ ++ + +M ++E E PD T +L CA
Sbjct: 120 MPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAA 179
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKG 196
+ H + SG V + T ++L
Sbjct: 180 CREAHAFAIRSGLEELVNVAT----------------------------------AILDA 205
Query: 197 YVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVAL 256
Y K GDI A +FD MP +N VSW MI G AQNG SR+AL+LFN M V + V++
Sbjct: 206 YCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSV 265
Query: 257 VAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFR 316
+AAL AC E+G L G +H + +G + VS+ NALI MY+ C ++ A VF
Sbjct: 266 LAALQACGELGCLDEGMRVHELL---VRIGLDSN-VSVMNALITMYSKCKRVDLASHVFD 321
Query: 317 KMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
++ RR VSW +MI G A+ G +++A+ F
Sbjct: 322 ELDRRTQVSWNAMILGCAQNGCSEDAVRLF 351
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 152/346 (43%), Gaps = 57/346 (16%)
Query: 116 PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCA 175
P T++ LL +CA G G VH ++ A G S T L N+Y C
Sbjct: 57 PVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMY--------AKCR 108
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
R PA A ++FD MP R+ V+W +++G A+NG +R
Sbjct: 109 R------PA--------------------DARRVFDRMPVRDRVAWNALVAGYARNGLAR 142
Query: 236 QALSLFNEMRRAR-VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
A+ + M+ D + LV+ L ACA L + H++ G E LV++
Sbjct: 143 MAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFA---IRSGLEE-LVNV 198
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF-------- 346
A++ Y CG+I A VF M +N+VSW +MI G+A+ G ++EAL F
Sbjct: 199 ATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGV 258
Query: 347 -------LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAF 399
L L AC G +DEG + E + + G+ + ++ ++S+ +D A
Sbjct: 259 DVTDVSVLAALQACGELGCLDEGMRVHELLVR-IGLDSNVSVMNALITMYSKCKRVDLAS 317
Query: 400 SLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE-IDPE 444
+ + + +++LGC + +E A ++ ++ E + P+
Sbjct: 318 HVFDELDRR-TQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPD 362
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
AL+ F M A + L CA GDL G+ +H+ + + E + +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAAR-GIDSEALAAT--- 98
Query: 297 ALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL 343
AL +MYA C +A VF +M R+ V+W +++ G+A+ G A+ A+
Sbjct: 99 ALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAM 145
>gi|356524110|ref|XP_003530675.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Glycine max]
Length = 611
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 188/528 (35%), Positives = 277/528 (52%), Gaps = 66/528 (12%)
Query: 32 TTKTLFQIHSQIIINGFSQKN---YILAKLLAFY--VTSGYLINAHKVFEKTENPSTAIW 86
T L QIH+Q + S ++ +L Y +T L A +VF NP++ +W
Sbjct: 34 TMPQLKQIHAQTLRTVNSNHPNAIFLYTNILQHYSSLTQPNLTYATRVFHHFPNPNSFMW 93
Query: 87 NQMIRGHARSETP---EKSVYLYKQMI---DKETEPDEYTYSFLLSVCARCGLFREGEQV 140
N +IR +ARS K++ LYK M+ +K PD +T+ +L CA EG+QV
Sbjct: 94 NTLIRVYARSTNTNHKHKAMELYKTMMTMEEKTAVPDNHTFPIVLKACAYTFSLCEGKQV 153
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKR 200
H VL G+ S+ +I NSL+ Y
Sbjct: 154 HAHVLKHGFESDTYI----------------------------------CNSLVHFYATC 179
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
G +D A K+F +M RN VSW MI A+ G AL +F EM+R D + + +
Sbjct: 180 GCLDLAEKMFYKMSERNEVSWNIMIDSYAKGGIFDTALRMFGEMQRVH-DPDGYTMQSVI 238
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGR-EPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
SACA +G L LG W+H+Y+ + + VLV N L+ MY GE+E A VF M
Sbjct: 239 SACAGLGALSLGLWVHAYILKKCDKNMVDDVLV--NTCLVDMYCKSGELEIAKQVFESMA 296
Query: 320 RRNTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGR 363
R+ +W SMI G A G A+ AL +TF+GVLSAC+H G VDEG
Sbjct: 297 FRDLNAWNSMILGLAMHGEAKAALNYYVRMVKVEKIVPNSITFVGVLSACNHRGMVDEGI 356
Query: 364 QFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG-CR 422
F+ M + + ++PR+EHYGC+VDLF+RAG ++EA +LV M +KP+ + SLL C+
Sbjct: 357 VHFDMMTKEYNVEPRLEHYGCLVDLFARAGRINEALNLVSEMSIKPDAVIWRSLLDACCK 416
Query: 423 IHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPP 482
+ + EL+ ++A+++ ++G L++ VYA+A RW DV +R+ M + GV K P
Sbjct: 417 QYASVELSEEMAKQVFESEGSVCSSGVYVLLSKVYASACRWNDVGLLRKLMSEKGVTKEP 476
Query: 483 GQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
G S ++I+GV+H+F AGD+T+ ++ IYK + EI + GY PD S
Sbjct: 477 GCSIIEIDGVVHEFFAGDTTHPKSENIYKVVTEIEEKLESIGYLPDYS 524
>gi|449438554|ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 161/504 (31%), Positives = 281/504 (55%), Gaps = 28/504 (5%)
Query: 38 QIHSQIIINGFSQKN-YILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
+ ++ + + S +N Y +LA Y G + NA K+F++ WN ++ +A+
Sbjct: 114 DVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQ 173
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
+++ LY+ + + ++++ +L +C + + +QVHG+VL +G+ SN+ +
Sbjct: 174 GCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLS 233
Query: 157 TNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
+++++ Y +CG + CAR LFD+M + + +W +++ GY K GD++ A ++F +MP
Sbjct: 234 SSIVDAY----AKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPE 289
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
+N VSW+ +ISG A+N +AL F +M + + +Q + L ACA I LK GK +
Sbjct: 290 KNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQV 349
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFA 334
H Y+ + V+ SL I MY+ CG +E + VF M +++ V W +MI+ A
Sbjct: 350 HGYLIRTYFRCNTIVVSSL----IDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALA 405
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
+ G+ ++A+ +TF+ +LSACSH G V EG +FF+ M + G+ P
Sbjct: 406 QNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQ 465
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
EHY C++DL RAG E + ++NM KP+D V +LL CRIHNN EL +VA++++
Sbjct: 466 EHYSCLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERVI- 524
Query: 440 EIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG 499
E+ P+ +A Y++L A++YA +W+ V VR+ M + +RK G SW+ + H F+A
Sbjct: 525 ELKPQSSAAYVSL-ASLYAFLGKWESVEKVRELMDEKFIRKERGISWIDVGNKTHSFIAS 583
Query: 500 DSTYKQASLIYKTLGEITMQAMQE 523
D + IY L ++ ++
Sbjct: 584 DRLHPLKEEIYLLLEQLARHTEED 607
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/441 (20%), Positives = 167/441 (37%), Gaps = 118/441 (26%)
Query: 76 EKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFR 135
++ ++ S I ++ ++ PE YL ++ + + LL +CA+ F+
Sbjct: 21 QRPDSTSLCIAQSLLDLSSQGRLPEALSYL-DRLAQRGVRLPTGIFVDLLRLCAKAKYFK 79
Query: 136 EGEQVHGRVLASGYCSNVFIRTN-LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLL 194
G+ VH + +G+ I N L+ +Y ECG D+ AR
Sbjct: 80 GGKCVHLHLKHTGFKRPTTIVANHLIGMYF----ECG--------RDVEAR--------- 118
Query: 195 KGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM---------- 244
K+FD+M RN+ SW M++G A+ G A LF+ M
Sbjct: 119 -------------KVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWNT 165
Query: 245 ---------------------RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENF 283
RR +G + + L C ++ +L+L K +H V
Sbjct: 166 IVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQV---L 222
Query: 284 SVGREPVLVSLNNALIHMYASCGEIE-------------------------------EAY 312
G LV L+++++ YA CGE+ A
Sbjct: 223 VAGFLSNLV-LSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSAS 281
Query: 313 GVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGG 357
+F +M +N VSW+++I+G+A+ EAL TF L AC+
Sbjct: 282 ELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIA 341
Query: 358 FVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSL 417
+ G+Q + + + + ++D++S+ G+++ + + M K + V ++
Sbjct: 342 ALKHGKQVHGYLIRTY-FRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTM 400
Query: 418 LLGCRIHNNAELASQVAQKLV 438
+ + + E A Q+ +V
Sbjct: 401 ISALAQNGHGEKAMQMFNDMV 421
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 32/215 (14%)
Query: 229 AQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGRE 288
+ G+ +ALS + + + V L V L CA+ K GK +H +++ R
Sbjct: 38 SSQGRLPEALSYLDRLAQRGVRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHT-GFKRP 96
Query: 289 PVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLG 348
+V+ N LI MY CG EA VF KM RN SW M+ G+AK G
Sbjct: 97 TTIVA--NHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGD---------- 144
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQN---M 405
V+ R+ F+ M ++ + + +V +++ G +EA L ++ +
Sbjct: 145 ----------VNNARKLFDRM-----MEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRL 189
Query: 406 PMKPNDAVLGSLLLGCRIHNNAELASQV-AQKLVA 439
M N +L+ C +LA QV Q LVA
Sbjct: 190 DMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVA 224
>gi|449530628|ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 161/504 (31%), Positives = 281/504 (55%), Gaps = 28/504 (5%)
Query: 38 QIHSQIIINGFSQKN-YILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
+ ++ + + S +N Y +LA Y G + NA K+F++ WN ++ +A+
Sbjct: 114 DVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQ 173
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
+++ LY+ + + ++++ +L +C + + +QVHG+VL +G+ SN+ +
Sbjct: 174 GCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLS 233
Query: 157 TNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
+++++ Y +CG + CAR LFD+M + + +W +++ GY K GD++ A ++F +MP
Sbjct: 234 SSIVDAY----SKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPE 289
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
+N VSW+ +ISG A+N +AL F +M + + +Q + L ACA I LK GK +
Sbjct: 290 KNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQV 349
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFA 334
H Y+ + V+ SL I MY+ CG +E + VF M +++ V W +MI+ A
Sbjct: 350 HGYLIRTYFRCNTIVVSSL----IDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALA 405
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
+ G+ ++A+ +TF+ +LSACSH G V EG +FF+ M + G+ P
Sbjct: 406 QNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQ 465
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
EHY C++DL RAG E + ++NM KP+D V +LL CRIHNN EL +VA++++
Sbjct: 466 EHYACLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERVI- 524
Query: 440 EIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG 499
E+ P+ +A Y++L A++YA +W+ V VR+ M + +RK G SW+ + H F+A
Sbjct: 525 ELKPQSSAAYVSL-ASLYAFLGKWESVEKVRELMDEKFIRKERGISWIDVGNKTHSFIAS 583
Query: 500 DSTYKQASLIYKTLGEITMQAMQE 523
D + IY L ++ ++
Sbjct: 584 DRLHPLKEEIYLLLEQLARHTEED 607
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 149/393 (37%), Gaps = 117/393 (29%)
Query: 124 LLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN-LMNLYLMSGGECGVGCARLLFDDM 182
LL +CA+ F+ G+ VH + +G+ I N L+ +Y ECG D+
Sbjct: 68 LLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIVANHLIGMYF----ECG--------RDV 115
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
AR K+FD+M RN+ SW M++G A+ G A LF+
Sbjct: 116 EAR----------------------KVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFD 153
Query: 243 EM-------------------------------RRARVGLDQVALVAALSACAEIGDLKL 271
M RR +G + + L C ++ +L+L
Sbjct: 154 RMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQL 213
Query: 272 GKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIE---------------------- 309
K +H V G LV L+++++ Y+ CGE+
Sbjct: 214 AKQVHGQV---LVAGFLSNLV-LSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVS 269
Query: 310 ---------EAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LT 345
A +F +M +N VSW+++I+G+A+ EAL T
Sbjct: 270 GYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYT 329
Query: 346 FLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
F L AC+ + G+Q + + + + ++D++S+ G+++ + + M
Sbjct: 330 FSSCLCACASIAALKHGKQVHGYLIRTY-FRCNTIVVSSLIDMYSKCGMLEASCCVFHLM 388
Query: 406 PMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
K + V +++ + + E A Q+ +V
Sbjct: 389 GNKQDVVVWNTMISALAQNGHGEKAMQMFNDMV 421
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 92/215 (42%), Gaps = 32/215 (14%)
Query: 229 AQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGRE 288
+ G+ +ALS + + + + L V L CA+ K GK +H +++ R
Sbjct: 38 SSQGRLPEALSYLDRLAQRGIRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHT-GFKRP 96
Query: 289 PVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLG 348
+V+ N LI MY CG EA VF KM RN SW M+ G+AK G
Sbjct: 97 TTIVA--NHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGD---------- 144
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQN---M 405
V+ R+ F+ M ++ + + +V +++ G +EA L ++ +
Sbjct: 145 ----------VNNARKLFDRM-----MEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRL 189
Query: 406 PMKPNDAVLGSLLLGCRIHNNAELASQV-AQKLVA 439
M N +L+ C +LA QV Q LVA
Sbjct: 190 DMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVA 224
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 166/496 (33%), Positives = 266/496 (53%), Gaps = 53/496 (10%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
L+ Y + GY+ NA K+F++ WN MI G+A + ++++ L+K M+ PD
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
E T ++S CA+ G G QVH + G+ SN+ I L++LY
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLY-------------- 311
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
K G+++ A +F+ +P+++V+SW T+I G ++A
Sbjct: 312 --------------------SKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEA 351
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
L LF EM R+ + V +++ L ACA +G + +G+WIH Y+++ SL +
Sbjct: 352 LLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNAS--SLRTS 409
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------------- 343
LI MYA CG+IE A+ VF + ++ SW +MI GFA G A +
Sbjct: 410 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPD 469
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
+TF+G+LSACSH G +D GR F M Q++ + P++EHYGCM+DL +GL EA ++
Sbjct: 470 DITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMI 529
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKR 462
M M+P+ + SLL C++H N EL A+ L+ +I+PE Y+ L++N+YA+A R
Sbjct: 530 NMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLI-KIEPENPGSYV-LLSNIYASAGR 587
Query: 463 WQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQ 522
W +VA R + G++K PG S ++I+ V+H+F+ GD + + IY L E+ + +
Sbjct: 588 WNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK 647
Query: 523 EGYKPDISELFLGIEE 538
G+ PD SE+ +EE
Sbjct: 648 AGFVPDTSEVLQEMEE 663
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 146/452 (32%), Positives = 249/452 (55%), Gaps = 27/452 (5%)
Query: 5 EIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVT 64
+P++ ++ SLL T ++L IH+Q+I G NY L+KL+ F +
Sbjct: 18 HFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCIL 77
Query: 65 SGY---LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
S + L A VF+ + P+ IWN M RGHA S P ++ LY MI P+ YT+
Sbjct: 78 SPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTF 137
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDD 181
F+L CA+ F+EG+Q+HG VL G ++++ T+L+++Y+ +G + A +FD
Sbjct: 138 PFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGR---LEDAHKVFDK 194
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
P R VVS+ +L+KGY RG I+ A K+FDE+P ++VVSW MISG A+ G ++AL LF
Sbjct: 195 SPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELF 254
Query: 242 NEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHM 301
+M + V D+ +V +SACA+ G ++LG+ +H +++++ G +V NALI +
Sbjct: 255 KDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDH-GFGSNLKIV---NALIDL 310
Query: 302 YASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF--------------- 346
Y+ CGE+E A G+F ++ ++ +SW ++I G+ +EALL F
Sbjct: 311 YSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTM 370
Query: 347 LGVLSACSHGGFVDEGRQFFECMNQNW-GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
L +L AC+H G +D GR +++ G+ ++D++++ G + EA V N
Sbjct: 371 LSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDI-EAAHQVFNS 429
Query: 406 PMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
+ + + +++ G +H A+ + + ++
Sbjct: 430 ILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 461
>gi|242062638|ref|XP_002452608.1| hypothetical protein SORBIDRAFT_04g028970 [Sorghum bicolor]
gi|241932439|gb|EES05584.1| hypothetical protein SORBIDRAFT_04g028970 [Sorghum bicolor]
Length = 485
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 166/430 (38%), Positives = 246/430 (57%), Gaps = 32/430 (7%)
Query: 125 LSVCARC-GLFREGEQVHGRVLASGY---CSNVFIRTNLMNLYLMSGGECGVGCARLLFD 180
L+ CAR E EQ+H ++ SG S+V + T+L+ Y G C AR +FD
Sbjct: 63 LAACARLPAAVAEAEQIHALLVKSGVPRTVSDVQVSTSLIRAYARLGRVCD---ARKVFD 119
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSL 240
MP R+VV+WN LL V+ GD+D AW++F EMP RNVVSW T+I+G +NG +++A+ L
Sbjct: 120 GMPDRTVVTWNVLLDALVRDGDLDAAWEVFVEMPQRNVVSWNTIIAGFTRNGWAQEAVDL 179
Query: 241 FNEMRRAR-VGLDQVALVAALSACAEIGDLKLGKWIHSYV-EENFSVGREPVLVSLNNAL 298
F EM A + D+ +V +SA +IG L +GK H YV FS+ +L AL
Sbjct: 180 FVEMTVAYGLAPDEATMVGFVSAVRDIGLLGIGKSAHGYVLRREFSLDG-----ALGVAL 234
Query: 299 IHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------------- 343
I MY CG + A+ F + +N WTS+I GFA G ++AL
Sbjct: 235 ISMYTRCGSMGAAHSCFLSVTTKNVEHWTSLIAGFAAHGQPEKALRLFAEMRRVGIEPNG 294
Query: 344 LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQ 403
+TF+ VL+AC+HGG V EG ++F+ M ++ GI+P I+HYGC+VDL RAG + EAF+L
Sbjct: 295 VTFVAVLNACNHGGLVSEGFKYFDLM-RSMGIRPMIQHYGCLVDLLGRAGFLKEAFNLAS 353
Query: 404 NMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRW 463
N+P P + SLL C H + E+A A KL A+ P + Y+ L++N YA AK+W
Sbjct: 354 NLPEDPGFVIWSSLLAACHSHGDVEMAELTASKL-ADAKPSHGSSYV-LLSNTYARAKQW 411
Query: 464 QDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQE 523
+D+ R++M + GV K PG SW++++G +H F D + ++ IY+ L ++
Sbjct: 412 EDLRRTRRRMEEHGVTKKPGLSWIEVDGGVHSFATADKLHMESEDIYQMLEDLKHNLTSA 471
Query: 524 GYKPDISELF 533
Y+ + L+
Sbjct: 472 AYEHEPFALY 481
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 8/193 (4%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQM-IDKETEP 116
LL V G L A +VF + + WN +I G R+ +++V L+ +M + P
Sbjct: 132 LLDALVRDGDLDAAWEVFVEMPQRNVVSWNTIIAGFTRNGWAQEAVDLFVEMTVAYGLAP 191
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCAR 176
DE T +S GL G+ HG VL + + + L+++Y G +G A
Sbjct: 192 DEATMVGFVSAVRDIGLLGIGKSAHGYVLRREFSLDGALGVALISMYTRCG---SMGAAH 248
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP----HRNVVSWTTMISGCAQNG 232
F + ++V W SL+ G+ G + A ++F EM N V++ +++ C G
Sbjct: 249 SCFLSVTTKNVEHWTSLIAGFAAHGQPEKALRLFAEMRRVGIEPNGVTFVAVLNACNHGG 308
Query: 233 KSRQALSLFNEMR 245
+ F+ MR
Sbjct: 309 LVSEGFKYFDLMR 321
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
H ++ FS + L++ Y G + AH F + W +I G A P
Sbjct: 216 HGYVLRREFSLDGALGVALISMYTRCGSMGAAHSCFLSVTTKNVEHWTSLIAGFAAHGQP 275
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
EK++ L+ +M EP+ T+ +L+ C GL EG
Sbjct: 276 EKALRLFAEMRRVGIEPNGVTFVAVLNACNHGGLVSEG 313
>gi|147811906|emb|CAN68178.1| hypothetical protein VITISV_000846 [Vitis vinifera]
Length = 633
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 182/530 (34%), Positives = 280/530 (52%), Gaps = 81/530 (15%)
Query: 18 LTTR--QIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHK 73
LT R + S LQ ++ K + Q I +G ++++K+++F S G L+ A
Sbjct: 2 LTIRVPDLLSKLQQLSSVKEVEQTQCLITKSGLFNHPFVISKIISFLSLSPLGSLVYAQA 61
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGL 133
+FE T + + N MIR +A+S P K++YLY M K+ + D + Y F L CAR
Sbjct: 62 IFEDTTMDNPFVCNTMIRAYAKSVFPIKAIYLYNFMHRKDIKSDHFMYPFGLKACARVLW 121
Query: 134 FREGE-------------QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLF 179
EG+ ++H R+ G + FI+ +L+ LY +CG + AR +F
Sbjct: 122 CNEGDIKCTQLDIACKGAEIHCRLFRLGLDQDCFIQNSLVYLY----SQCGFLDLARRVF 177
Query: 180 DDM-------------------------------PARSVVSWNSLLKGYVKRGDIDGAWK 208
D+M P ++VVSWN L+ Y++ G I+ A
Sbjct: 178 DEMTEKTITSWNVMISAYDQINDFDSADSLIGSMPGKNVVSWNMLIARYIRLGKIEDAKA 237
Query: 209 IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGD 268
+F EMP R+ VSW +MI+G Q +AL+LF EM A V + L++ L ACAE G
Sbjct: 238 VFQEMPERDAVSWNSMIAGYVQIKDYARALALFREMEIANVEATDITLISVLGACAETGA 297
Query: 269 LKLGKWIHSYVEENFSVGRE-PVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
L++G+ IH +++ RE + L+NAL+ MYA CG + A+ VF +++ ++ W
Sbjct: 298 LEIGRKIHLSLKQ-----REYKIEGYLSNALVDMYAKCGHLNLAWEVFSELKMKHISCWN 352
Query: 328 SMITGFAKQGYAQEAL-----------------LTFLGVLSACSHGGFVDEGRQFFECMN 370
+MI A GY +EAL +TF+GVL ACSH G VDEGR+FF M
Sbjct: 353 AMIVSLAVHGYCEEALRLFSTMEMSVDGARPNRVTFIGVLIACSHKGLVDEGRKFFNRMV 412
Query: 371 QNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELA 430
+ I P I+HYGCMVDL SR GL+ EA +++ MP + N + +LL CR+H++ +LA
Sbjct: 413 NEYKIMPDIKHYGCMVDLLSRCGLLKEAHHMIKTMPFEANSVLWRTLLGACRVHHHVDLA 472
Query: 431 SQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDV---AAVRQKMIKMG 477
+ Q+L +++P + Y+ L++N+YA A+RW DV + + +I MG
Sbjct: 473 EESFQQL-GKMEPLRDGDYV-LLSNIYAEAQRWNDVERASKILANLIVMG 520
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 170/507 (33%), Positives = 275/507 (54%), Gaps = 59/507 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH ++I +GF ++I + L+ Y G+L A +VFE+ + WN MI G+
Sbjct: 228 EIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKG 287
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+ L+K+M ++ +P T S L+ VC+R EG+ VHG + + S+VFI +
Sbjct: 288 DSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINS 347
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
+LM+LY +CG V A +F +P VVSWN ++ GYV G + A +F E
Sbjct: 348 SLMDLYF----KCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSE---- 399
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
MR++ V D + + L+AC+++ L+ G+ IH
Sbjct: 400 ---------------------------MRKSYVEPDAITFTSVLTACSQLAALEKGEEIH 432
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+ + E E V+ AL+ MYA CG ++EA+ VF+ + +R+ VSWTSMIT +
Sbjct: 433 NLIIEKKLDNNEVVM----GALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSH 488
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G A AL +TFL +LSAC H G VDEG +F M +GI PR+EH
Sbjct: 489 GQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRVEH 548
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDA-VLGSLLLGCRIHNNAELASQVAQKLVAE 440
Y C++DL RAG + EA+ ++Q P +D +L +L CR+H N +L +++A+ L+ +
Sbjct: 549 YSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDK 608
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
DP+ ++ Y+ L++N+YA+A +W +V VR KM ++G++K PG SW++IN + F D
Sbjct: 609 -DPDDSSTYI-LLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVED 666
Query: 501 STYKQASLIYKTLGEITMQAMQEGYKP 527
+++ L++K L ++ M++ KP
Sbjct: 667 NSHLHLELVFKCLSYLS-DHMEDESKP 692
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 185/403 (45%), Gaps = 70/403 (17%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQ---IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKV 74
+ TR++ LL+ +K+L Q IH +++ G ++ L+ Y++ +A V
Sbjct: 1 MDTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCV 60
Query: 75 FEKTENP-STAIWNQMIRGHARSETPEKSVYLYKQMIDKE-TEPDEYTYSFLLSVCARCG 132
F+ ENP ++WN ++ G+ ++ +++ L+++++ +PD YTY +L C
Sbjct: 61 FDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLY 120
Query: 133 LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNS 192
+ G+ +H ++T LM +V +S
Sbjct: 121 KYVLGKMIH----------TCLVKTGLM------------------------MDIVVGSS 146
Query: 193 LLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLD 252
L+ Y K + A +F+EMP ++V W T+IS Q+G ++AL F MRR +
Sbjct: 147 LVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPN 206
Query: 253 QVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVS-LNNALIHMYASCGEIEEA 311
V + A+S+CA + DL G IH EE + G +L S +++AL+ MY CG +E A
Sbjct: 207 SVTITTAISSCARLLDLNRGMEIH---EELINSGF--LLDSFISSALVDMYGKCGHLEMA 261
Query: 312 YGVFRKMQRRNTVSWTSMITGFAKQGYA---------------QEALLTFLGVLSACSHG 356
VF +M ++ V+W SMI+G+ +G + + L T ++ CS
Sbjct: 262 IEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRS 321
Query: 357 GFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAF 399
+ EG+ + I+ RI+ D+F + LMD F
Sbjct: 322 ARLLEGK-----FVHGYTIRNRIQS-----DVFINSSLMDLYF 354
>gi|297819366|ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323404|gb|EFH53825.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 591
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 166/478 (34%), Positives = 257/478 (53%), Gaps = 60/478 (12%)
Query: 73 KVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEP-DEYTYSFLLSVCARC 131
+VF + NP+ + N MIR + S+TP + L++ + + P + + SF L C +
Sbjct: 67 RVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRALRRNISFPANPLSSSFALKCCIKS 126
Query: 132 GLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWN 191
G G Q+HG++ + G+ S+ + T LM+LY N
Sbjct: 127 GDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLY-----------------------STCEN 163
Query: 192 SLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR--- 248
S A K+FDE+P R+ VSW +IS +N ++R L LF++M+
Sbjct: 164 S-----------TDACKVFDEIPQRDTVSWNVLISCYLRNKRTRDVLVLFDKMKNDVDRC 212
Query: 249 VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEI 308
V D V + AL ACA +G L GK +H +++EN G ++L+N L+ MY+ CG +
Sbjct: 213 VKPDNVTCLLALQACANLGALDFGKQVHDFIDENGLSG----ALNLSNTLVSMYSRCGSM 268
Query: 309 EEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF---------------LGVLSAC 353
++AY VF +M+ RN VSWT+MI+G A G+ +EA+ F G+LSAC
Sbjct: 269 DKAYEVFNRMRERNVVSWTAMISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSAC 328
Query: 354 SHGGFVDEGRQFFECMNQ-NWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDA 412
SH G VDEG FF+ M + IKP + HYGC+VDL RA L+D+A+SL+++M MKP+
Sbjct: 329 SHSGLVDEGMMFFDRMRSGEFKIKPNLHHYGCIVDLLGRARLLDKAYSLIKSMEMKPDST 388
Query: 413 VLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQK 472
+ +LL CR+H N EL +V L+ E E+A Y+ L+ N Y++ +W+ V +R
Sbjct: 389 IWRTLLGACRVHGNVELGERVIAHLI-EFKAEEAGDYV-LLLNTYSSVGKWEKVTELRSL 446
Query: 473 MIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
M K ++ PG S +++ G +H+F+ D ++ + IYK L EI Q GY +I+
Sbjct: 447 MKKKRIQTNPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEIT 504
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 115/266 (43%), Gaps = 49/266 (18%)
Query: 8 PANPATSSKALTTRQIFSLLQIRNTTKTL--FQIHSQIIINGFSQKNYILAKLLAFYVTS 65
PANP +SS F+L + L QIH +I +GF + ++ L+ Y T
Sbjct: 110 PANPLSSS--------FALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTC 161
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQM---IDKETEPDEYTYS 122
+A KVF++ T WN +I + R++ + L+ +M +D+ +PD T
Sbjct: 162 ENSTDACKVFDEIPQRDTVSWNVLISCYLRNKRTRDVLVLFDKMKNDVDRCVKPDNVTCL 221
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDD 181
L CA G G+QVH + +G + + L+++Y CG + A +F+
Sbjct: 222 LALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMY----SRCGSMDKAYEVFNR 277
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
M R+VVSW T MISG A NG ++A+ F
Sbjct: 278 MRERNVVSW-------------------------------TAMISGLAMNGFGKEAIEAF 306
Query: 242 NEMRRARVGLDQVALVAALSACAEIG 267
NEM + + ++ L LSAC+ G
Sbjct: 307 NEMLKFGISPEEQTLTGLLSACSHSG 332
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 107/225 (47%), Gaps = 28/225 (12%)
Query: 202 DIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR-ARVGLDQVALVAAL 260
DI+ + ++F + + + TMI + + + LF +RR + ++ AL
Sbjct: 61 DINYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRALRRNISFPANPLSSSFAL 120
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVG--REPVLVSLNNALIHMYASCGEIEEAYGVFRKM 318
C + GDL G IH + FS G + +L++ L+ +Y++C +A VF ++
Sbjct: 121 KCCIKSGDLLGGLQIHGKI---FSDGFLSDSLLMT---TLMDLYSTCENSTDACKVFDEI 174
Query: 319 QRRNTVSWTSMITGFAKQGYAQEALLTF------------------LGVLSACSHGGFVD 360
+R+TVSW +I+ + + ++ L+ F L L AC++ G +D
Sbjct: 175 PQRDTVSWNVLISCYLRNKRTRDVLVLFDKMKNDVDRCVKPDNVTCLLALQACANLGALD 234
Query: 361 EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
G+Q + +++N G+ + +V ++SR G MD+A+ + M
Sbjct: 235 FGKQVHDFIDEN-GLSGALNLSNTLVSMYSRCGSMDKAYEVFNRM 278
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H I NG S + L++ Y G + A++VF + + W MI G A +
Sbjct: 238 QVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYEVFNRMRERNVVSWTAMISGLAMNG 297
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRV 144
++++ + +M+ P+E T + LLS C+ GL EG R+
Sbjct: 298 FGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVDEGMMFFDRM 344
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 167/519 (32%), Positives = 273/519 (52%), Gaps = 59/519 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H+ +I + Y+ +LL FY L +A KV ++ + W MI ++++
Sbjct: 72 RVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTG 131
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ ++ +M+ + +P+E+T++ +L+ C R G+Q+HG ++ Y S++F+ +
Sbjct: 132 HSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGS 191
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
+L+++ Y K G I+ A +IF+ +P R+
Sbjct: 192 SLLDM----------------------------------YAKAGQIEEAREIFECLPERD 217
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VVS T +I+G AQ G +AL +F ++ + + V + L+A + + L GK H
Sbjct: 218 VVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHC 277
Query: 278 YVEENFSVGRE-PVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+V + RE P L N+LI MY+ CG + A +F M R +SW +M+ G++K
Sbjct: 278 HV-----LRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKH 332
Query: 337 GYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFECM-NQNWGIKPRI 379
G +E L +T L VLS CSHG D G ++ M +GIKP
Sbjct: 333 GLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDT 392
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
EHYGC+VD+ RAG +DEAF ++ MP KP VLGSLL CR+H + ++ V +L+
Sbjct: 393 EHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGEYVGHRLI- 451
Query: 440 EIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG 499
EI+PE A Y+ L +N+YA+A RW+DV VR M++ V K PG+SW+Q LH F A
Sbjct: 452 EIEPENAGNYVIL-SNLYASAGRWEDVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHAN 510
Query: 500 DSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
D T+ + + + EI+++ Q GY PDIS + ++E
Sbjct: 511 DRTHPRREEVLAKMKEISIKMKQAGYVPDISCVLYDVDE 549
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 139/305 (45%), Gaps = 58/305 (19%)
Query: 119 YTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARL 177
+ Y LL+ C REG++VH ++ + Y ++RT L+ Y G+C + AR
Sbjct: 52 HCYDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFY----GKCDCLEDARK 107
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
+ D+MP ++VVSW +++ Y +Q G S +A
Sbjct: 108 VLDEMPEKNVVSWTAMISRY-------------------------------SQTGHSSEA 136
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY-VEENFSVGREPVLVSLNN 296
LS+F EM R+ ++ L++C L LGK IH V+ N+ + + +
Sbjct: 137 LSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSH-----IFVGS 191
Query: 297 ALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------- 343
+L+ MYA G+IEEA +F + R+ VS T++I G+A+ G +EAL
Sbjct: 192 SLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRP 251
Query: 344 --LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
+T+ +L+A S +D G+Q C + ++D++S+ G + A L
Sbjct: 252 NYVTYASLLTALSGLALLDHGKQ-AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRL 310
Query: 402 VQNMP 406
NMP
Sbjct: 311 FDNMP 315
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 167/518 (32%), Positives = 283/518 (54%), Gaps = 59/518 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH+ + G +++ L+ Y G + A +F + A WN ++ G+ S
Sbjct: 1058 QIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSG 1117
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGL--FREGEQVHGRVLASGYCSNVFI 155
K++ LY M + D+ T + + A GL ++G+Q+H V+ G+ ++F+
Sbjct: 1118 DFPKALRLYILMQESGERSDQIT--LVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFV 1175
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
+ ++++YL K G+++ A ++F E+P
Sbjct: 1176 TSGVLDMYL----------------------------------KCGEMESARRVFSEIPS 1201
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
+ V+WTTMISGC +NG+ AL +++MR ++V D+ + AC+ + L+ G+ I
Sbjct: 1202 PDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQI 1261
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
H+ + + + +P +++ +L+ MYA CG IE+A G+F++ R SW +MI G A+
Sbjct: 1262 HANIVK-LNCAFDPFVMT---SLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQ 1317
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
G A+EAL +TF+GVLSACSH G V E + F M +N+GI+P IE
Sbjct: 1318 HGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIE 1377
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HY C+VD SRAG ++EA ++ +MP + + ++ +LL CR+ + E +VA+KL+A
Sbjct: 1378 HYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLA- 1436
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
++P +A Y+ L++NVYAAA +W++VA+ R M K+ V+K PG SWV + +H FVAGD
Sbjct: 1437 LEPSDSAAYV-LLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGD 1495
Query: 501 STYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++++ +IY + I + +EGY PD + +EE
Sbjct: 1496 RSHEETDVIYNKVEYIMKRIREEGYVPDTDFALVDVEE 1533
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 119/465 (25%), Positives = 190/465 (40%), Gaps = 79/465 (16%)
Query: 9 ANPATSSKAL--TTRQIFSLLQIRNTTKTLF---QIHSQIIINGFSQKNYILAKLLAFYV 63
ANP T L + Q FS+L+ L + H++I+ +G ++ L+ Y
Sbjct: 643 ANPLTPRAHLIHSLPQCFSILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYA 702
Query: 64 TSGYLINAHKVFEKT--ENPSTAIWNQMIRG-HARSETPEKSVYLYKQMIDKETEPDEYT 120
G L +A K+F+ T N WN ++ A ++ +L++ + +T
Sbjct: 703 KCGSLSSARKLFDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHT 762
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFD 180
+ + +C E +HG + G +VF+ L+N+Y G + AR+LFD
Sbjct: 763 LAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGL---IREARVLFD 819
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR------------------------ 216
M R VV WN ++K YV A +F E HR
Sbjct: 820 GMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEF-HRTGFRPDDVTLRTLSRVVKCKKNIL 878
Query: 217 --------------------NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVAL 256
+V+ W +S Q G++ +A+ F +M +RV D +
Sbjct: 879 ELKQFKAYATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTF 938
Query: 257 VAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFR 316
V L+ A + L+LGK IH V + G + V VS+ N LI+MY G + A VF
Sbjct: 939 VVMLTVVAGLNCLELGKQIHGIVMRS---GLDQV-VSVGNCLINMYVKAGSVSRARSVFG 994
Query: 317 KMQRRNTVSWTSMITGFAKQGYAQ-----------EALL----TFLGVLSACS--HGGFV 359
+M + +SW +MI+G G + ++LL T VL ACS GG+
Sbjct: 995 QMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYY 1054
Query: 360 DEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQN 404
Q C G+ ++D++S+ G M+EA L N
Sbjct: 1055 -LATQIHACA-MKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVN 1097
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 160/369 (43%), Gaps = 59/369 (15%)
Query: 71 AHKVFEKTENPSTAI-WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
A K+F ++ S I WN+ + + ++V + MI+ D T+ +L+V A
Sbjct: 887 ATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVA 946
Query: 130 RCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVS 189
G+Q+HG V+ SG ++S G C
Sbjct: 947 GLNCLELGKQIHGIVMRSGLDQ------------VVSVGNC------------------- 975
Query: 190 WNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARV 249
L+ YVK G + A +F +M +++SW TMISGC +G ++ +F + R +
Sbjct: 976 ---LINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSL 1032
Query: 250 GLDQVALVAALSACAEI-GDLKLGKWIHSYVEENFSVGREPVLVS-LNNALIHMYASCGE 307
DQ + + L AC+ + G L IH+ ++ VL S ++ ALI +Y+ G+
Sbjct: 1033 LPDQFTVASVLRACSSLEGGYYLATQIHA-----CAMKAGVVLDSFVSTALIDVYSKRGK 1087
Query: 308 IEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFL-------------GVLSACS 354
+EEA +F + SW +++ G+ G +AL ++ V +A +
Sbjct: 1088 MEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKA 1147
Query: 355 HGGFV--DEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDA 412
GG V +G+Q + + G + ++D++ + G M+ A + +P P+D
Sbjct: 1148 AGGLVGLKQGKQIHAVVVKR-GFNLDLFVTSGVLDMYLKCGEMESARRVFSEIP-SPDDV 1205
Query: 413 VLGSLLLGC 421
+++ GC
Sbjct: 1206 AWTTMISGC 1214
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 174/516 (33%), Positives = 274/516 (53%), Gaps = 52/516 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H+ +++ G + Y+ +L+ Y G + A VF++ WN M+ G ++
Sbjct: 145 KVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNG 204
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+ ++ M D T LLS C + G+++HG
Sbjct: 205 EARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHG--------------- 249
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
Y++ GE G C L NS++ Y + A K+F+ + ++
Sbjct: 250 -----YVVRNGESGRVCNGFLM-----------NSIIDMYCNCESVSCARKLFEGLRVKD 293
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VVSW ++ISG + G + QAL LF M D+V +++ L+AC +I L+LG + S
Sbjct: 294 VVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQS 353
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
YV + V V V + ALI MYA+CG + A VF +M +N + T M+TGF G
Sbjct: 354 YVVKRGYV----VNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHG 409
Query: 338 YAQEALLTF---LG------------VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+EA+ F LG VLSACSH G VDEG++ F M +++ ++PR HY
Sbjct: 410 RGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHY 469
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
C+VDL RAG +DEA+++++NM +KPN+ V +LL CR+H N +LA AQKL E++
Sbjct: 470 SCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQKLF-ELN 528
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P+ +GY+ L +N+YAA +RW+DV VR + K +RKPP S+V++N ++H F GD++
Sbjct: 529 PDGVSGYVCL-SNIYAAERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQFFVGDTS 587
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++Q+ IY L ++ Q + GYKPD S + +EE
Sbjct: 588 HEQSDDIYAKLKDLNEQLKKAGYKPDTSLVLYDVEE 623
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 189/369 (51%), Gaps = 56/369 (15%)
Query: 6 IIPANPATSSKALTTRQIFSLLQIRNTTKTL---FQIHSQIIINGFSQKN-YILAKLLAF 61
+IP +TS+ + Q +LLQ +K+L Q+H+ + G ++N Y+ KL A
Sbjct: 10 LIPKPSSTST--FDSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAAC 67
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
Y G++ A +F++ ++ +WN MIRG+A + +P ++++LY +M+ +PD +TY
Sbjct: 68 YAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTY 127
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDD 181
F+L C L G +VH V+ G +V++ +++++Y G V AR++FD
Sbjct: 128 PFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFG---DVEAARVVFDR 184
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
M R + SWN+++ G+VK G+ GA+++ F
Sbjct: 185 MLVRDLTSWNTMMSGFVKNGEARGAFEV-------------------------------F 213
Query: 242 NEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHM 301
+MRR D+ L+A LSAC ++ DLK+GK IH YV N GR L N++I M
Sbjct: 214 GDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGR-VCNGFLMNSIIDM 272
Query: 302 YASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTF 346
Y +C + A +F ++ ++ VSW S+I+G+ K G A +AL +T
Sbjct: 273 YCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTV 332
Query: 347 LGVLSACSH 355
+ VL+AC+
Sbjct: 333 ISVLAACNQ 341
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 164/490 (33%), Positives = 270/490 (55%), Gaps = 27/490 (5%)
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
G L +A ++ + + W +I G++R+ ++V + M+ PDE T +L
Sbjct: 185 GLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGML 244
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDM-P 183
S C + G +H V + + L+++Y +CG G AR +FD +
Sbjct: 245 SACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMY----AKCGDTGRAREVFDALGR 300
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
R WN+++ GY K G +D A +FD+M +V+++ ++I+G G+ R+AL LF +
Sbjct: 301 GRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTK 360
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
MRR +G D +V L+A A +G L G+ +H+ +E+ V R+ V L AL+ MY
Sbjct: 361 MRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRL-VERD---VYLGTALLDMYM 416
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLG 348
CG +EEA F++M R+ +W++MI G A G + AL +T++
Sbjct: 417 KCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIA 476
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
VL+ACSH +DEGR +F+ M I+P+IEHYGCM+DL R+GL+DEA LVQ MPM+
Sbjct: 477 VLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDLVQTMPMQ 536
Query: 409 PNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAA 468
PN + S+L CR+H N +LA A L+ +++P + A Y+ + N+Y +++W+D +
Sbjct: 537 PNAVIWASILSACRVHKNVDLAQNAAHHLL-KLEPAEDAVYVQMY-NIYIDSRQWEDASK 594
Query: 469 VRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
+R+ M K GV+K G S + + G +H F+ GD ++ Q + I + EI + GY P
Sbjct: 595 IRRLMEKRGVKKTAGYSSIAVAGQVHKFIVGDRSHPQIAEIVVMMEEIGRRLKSAGYSPI 654
Query: 529 ISELFLGIEE 538
S++ + ++E
Sbjct: 655 TSQITVDVDE 664
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 167/336 (49%), Gaps = 34/336 (10%)
Query: 82 STAIWNQMIRGHARSET-PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGL-FREGEQ 139
ST +++ +R R+ + P++ + LY++M + PD +T+ FL CAR G G
Sbjct: 66 STFLFDTALRACFRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKCCARGGAHVLLGRM 125
Query: 140 VHGRVLASGYCSNV-FIRTNLMNLYLMSGGECGV-GCARLLFDDMPARSVVSWNSLLKGY 197
+H + S V I + ++++Y E G+ G AR FD+ + VV+W +++ G
Sbjct: 126 LHAACFRTLLPSAVPLIASPIIHMY----AELGLPGDARRAFDEASVKDVVAWTTVISGL 181
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
K G +D A ++ P RNVV+WT +ISG ++ G++ +A+ FN M + D+V ++
Sbjct: 182 AKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVI 241
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
LSAC ++ DL G +H V + + + ++V ALI MYA CG+ A VF
Sbjct: 242 GMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVV----ALIDMYAKCGDTGRAREVFDA 297
Query: 318 MQR-RNTVSWTSMITGFAKQGYAQEA-----------LLTFLGVLSACSHGGFVDEGRQF 365
+ R R W +MI G+ K G+ A ++TF +++ HGG + E
Sbjct: 298 LGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLL 357
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
F M + +G D F+ GL+ + SL
Sbjct: 358 FTKMRR----------HGLGADNFTMVGLLTASASL 383
>gi|356558692|ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Glycine max]
Length = 696
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 172/550 (31%), Positives = 282/550 (51%), Gaps = 69/550 (12%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H + GF +++ +L+ Y G + +A ++F+ S WN M+ G+A +
Sbjct: 154 VHCHALQMGFRNHLHVVNELVGMYGKLGRMEDARQLFDGMFVRSIVSWNTMVSGYALNRD 213
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE---------------------- 136
+ ++K+M + +P+ T++ LLS ARCGL+ E
Sbjct: 214 SLGASRVFKRMELEGLQPNSVTWTSLLSSHARCGLYDETLELFKVMRTRGIEIGAEALAV 273
Query: 137 -------------GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMP 183
G+++HG V+ GY +F++ L+ Y G +G A +F ++
Sbjct: 274 VLSVCADMAEVDWGKEIHGYVVKGGYEDYLFVKNALIGTY---GKHQHMGDAHKVFLEIK 330
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR----------NVVSWTTMISGCAQNGK 233
+++VSWN+L+ Y + G D A+ F M NV+SW+ +ISG A G+
Sbjct: 331 NKNLVSWNALISSYAESGLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSAVISGFAYKGR 390
Query: 234 SRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVS 293
++L LF +M+ A+V + V + + LS CAE+ L LG+ +H Y N + +LV
Sbjct: 391 GEKSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLGRELHGYAIRNMM--SDNILVG 448
Query: 294 LNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------- 343
N LI+MY CG+ +E + VF ++ R+ +SW S+I G+ G + AL
Sbjct: 449 --NGLINMYMKCGDFKEGHLVFDNIEGRDLISWNSLIGGYGMHGLGENALRTFNEMIRAR 506
Query: 344 -----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEA 398
+TF+ +LSACSH G V GR F+ M + I+P +EHY CMVDL RAGL+ EA
Sbjct: 507 MKPDNITFVAILSACSHAGLVAAGRNLFDQMVTEFRIEPNVEHYACMVDLLGRAGLLKEA 566
Query: 399 FSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYA 458
+V+NMP++PN+ V G+LL CR++ + ++ + A +++ + G L++N+YA
Sbjct: 567 TDIVRNMPIEPNEYVWGALLNSCRMYKDMDIVEETASQILTL--KSKITGSFMLLSNIYA 624
Query: 459 AAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITM 518
A RW D A VR G++K PGQSW+++ ++ F AG+ + IY L E+ +
Sbjct: 625 ANGRWDDSARVRVSARTKGLKKIPGQSWIEVRKKVYTFSAGNLVHFGLEDIYVILEELNL 684
Query: 519 QAMQEGYKPD 528
E YK D
Sbjct: 685 HMASENYKLD 694
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 203/422 (48%), Gaps = 46/422 (10%)
Query: 21 RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTEN 80
++ F+L Q R Q+HSQ+++ + ++ A+L+A Y +L +A KVF+
Sbjct: 39 QRCFTLQQAR-------QLHSQLVLTTAHRLPFLAARLIAVYARFAFLSHARKVFDAIPL 91
Query: 81 PSTA---IWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
S +WN +IR + + ++ LY +M PD +T ++ C+ G
Sbjct: 92 ESLHHLLLWNSIIRANVSHGYHQHALELYVEMRKLGFLPDGFTLPLVIRACSSLGSSYLC 151
Query: 138 EQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKG 196
VH L G+ +++ + L+ +Y G+ G + AR LFD M RS+VSWN+++ G
Sbjct: 152 RIVHCHALQMGFRNHLHVVNELVGMY----GKLGRMEDARQLFDGMFVRSIVSWNTMVSG 207
Query: 197 YVKRGDIDGAWKIFDEMP----HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLD 252
Y D GA ++F M N V+WT+++S A+ G + L LF MR + +
Sbjct: 208 YALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSSHARCGLYDETLELFKVMRTRGIEIG 267
Query: 253 QVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAY 312
AL LS CA++ ++ GK IH YV + G E L + NALI Y + +A+
Sbjct: 268 AEALAVVLSVCADMAEVDWGKEIHGYVVKG---GYEDYLF-VKNALIGTYGKHQHMGDAH 323
Query: 313 GVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQN 372
VF +++ +N VSW ++I+ +A+ G EA FL + + S + +
Sbjct: 324 KVFLEIKNKNLVSWNALISSYAESGLCDEAYAAFLHMEKSDS---------------DDH 368
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK---PNDAVLGSLLLGCRIHNNAEL 429
++P + + ++ F+ G +++ L + M + N + S+L C AEL
Sbjct: 369 SLVRPNVISWSAVISGFAYKGRGEKSLELFRQMQLAKVMANCVTISSVLSVC-----AEL 423
Query: 430 AS 431
A+
Sbjct: 424 AA 425
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 134/337 (39%), Gaps = 81/337 (24%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH ++ G+ ++ L+ Y ++ +AHKVF + +N + WN +I +A S
Sbjct: 289 EIHGYVVKGGYEDYLFVKNALIGTYGKHQHMGDAHKVFLEIKNKNLVSWNALISSYAESG 348
Query: 98 T-----------------------------------------PEKSVYLYKQMIDKETEP 116
EKS+ L++QM +
Sbjct: 349 LCDEAYAAFLHMEKSDSDDHSLVRPNVISWSAVISGFAYKGRGEKSLELFRQMQLAKVMA 408
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCA 175
+ T S +LSVCA G ++HG + + N+ + L+N+Y+ +CG
Sbjct: 409 NCVTISSVLSVCAELAALNLGRELHGYAIRNMMSDNILVGNGLINMYM----KCGDFKEG 464
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
L+FD++ R ++SWNSL+ GY G + A + F
Sbjct: 465 HLVFDNIEGRDLISWNSLIGGYGMHGLGENALRTF------------------------- 499
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
NEM RAR+ D + VA LSAC+ G + G+ + + F + EP V
Sbjct: 500 ------NEMIRARMKPDNITFVAILSACSHAGLVAAGRNLFDQMVTEFRI--EPN-VEHY 550
Query: 296 NALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMIT 331
++ + G ++EA + R M N W +++
Sbjct: 551 ACMVDLLGRAGLLKEATDIVRNMPIEPNEYVWGALLN 587
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 166/498 (33%), Positives = 266/498 (53%), Gaps = 53/498 (10%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
L+ Y + GY+ +A K+F++ WN MI G+A + +K++ L+K+M+ +PD
Sbjct: 147 LITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPD 206
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
E T + ++S CA+ G G QVH + G+ SN+ I L++LY
Sbjct: 207 ESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLY-------------- 252
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
K G+++ A ++ + + +++V+SW T+I G ++A
Sbjct: 253 --------------------SKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEA 292
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
L LF EM R+ + V +++ L ACA +G + +G+WIH Y+++ SL +
Sbjct: 293 LLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTS 352
Query: 298 LIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQGYAQEAL------------- 343
LI MYA CG+I+ A V R+ +W +MI GFA G A A
Sbjct: 353 LIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEP 412
Query: 344 --LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
+TF+G+LSACSH G +D GR F M Q++ I P++EHYGCM+DL +GL EA +
Sbjct: 413 DDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEM 472
Query: 402 VQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAK 461
+ MPM+P+ + SLL C+IH N EL A+KL+ +I+PE Y+ L++N+YA A
Sbjct: 473 INTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLI-KIEPENPGSYV-LLSNIYATAG 530
Query: 462 RWQDVAAVRQKMIKMGVRKP-PGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQA 520
+W +V +R + G++K PG S ++I+ V+H+F+ GD + Q IY L E+ +
Sbjct: 531 KWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLL 590
Query: 521 MQEGYKPDISELFLGIEE 538
+ G+ PD SE+ +EE
Sbjct: 591 EEAGFVPDTSEVLQEMEE 608
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 224/420 (53%), Gaps = 29/420 (6%)
Query: 48 FSQKNYILAKLLAFYVTSGY---LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVY 104
F +Y ++LL F + S + L A VFE P+ IWN M RGHA S P ++
Sbjct: 2 FPNTHYAXSQLLEFCILSPHFDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALK 61
Query: 105 LYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYL 164
LY MI P+ +T+ FLL CA+ F+EG+Q+HG VL G+ ++++ T+L+++Y
Sbjct: 62 LYVVMISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYA 121
Query: 165 MSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTM 224
+G + A+ +FD R VVS+ +L+ GY RG I+ A K+FDE+P ++VVSW M
Sbjct: 122 QNG---RLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAM 178
Query: 225 ISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFS 284
ISG A+ G ++AL LF EM + V D+ + +SACA+ G ++LG+ +HS++ ++
Sbjct: 179 ISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDH-G 237
Query: 285 VGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALL 344
G +V NALI +Y+ CGE+E A + + ++ +SW ++I G+ +EALL
Sbjct: 238 FGSNLKIV---NALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALL 294
Query: 345 TF---------------LGVLSACSHGGFVDEGRQFFECMNQNWG---IKPRIEHYGCMV 386
F L +L AC+H G +D GR +++ + ++
Sbjct: 295 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLI 354
Query: 387 DLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE-IDPEQ 445
D++++ G +D A + + + + +++ G +H A A + ++ I+P+
Sbjct: 355 DMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDD 414
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 178/576 (30%), Positives = 292/576 (50%), Gaps = 88/576 (15%)
Query: 32 TTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS-GYLINAHKVFEKTE-NPSTAIWNQM 89
T ++L QIH+ +I +G ++L+K+ F+ G++ A +T+ + T +N +
Sbjct: 17 TIRSLKQIHAHLIASGLLHDEFVLSKVSEFFGKHIGFVDYAFDFLNQTDLHVGTLPYNTL 76
Query: 90 IRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGY 149
I +A S TP+ + +Y +++ PD YT+ +L C + +EGEQVHG + G+
Sbjct: 77 IAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGVAVKMGF 136
Query: 150 CSNV----------------------------------------FIRTNL----MNLYL- 164
++ ++RT L +NL+L
Sbjct: 137 LCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINLFLK 196
Query: 165 -------------------MSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDG 205
M G G L++ +V N+L+ YVK +
Sbjct: 197 MDVVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCE 256
Query: 206 AWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAE 265
A K+FDE+P R++VSWT++ISG Q + + +L LF +M+ + V D++ L + LSACA
Sbjct: 257 ARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACAS 316
Query: 266 IGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVS 325
+G L G+W+ Y+E G E + + AL+ MYA CG IE A +F + RN +
Sbjct: 317 LGALDYGRWVQEYIERQ---GIEWD-IHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFT 372
Query: 326 WTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFF-ECM 369
W +++ G A G+ EAL +TFL +L+AC H G V EGR +F + +
Sbjct: 373 WNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQMI 432
Query: 370 NQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAEL 429
+Q + PR+EHYGCM+DL RAGL+DEA+ ++NMP+ P+ + G+LL C+ + N EL
Sbjct: 433 SQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACKANGNVEL 492
Query: 430 ASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQI 489
+ ++ L+ Q +G L++N+YA +RW DV VR+ M G+RK PG S +++
Sbjct: 493 SQEILSHLLEL--KSQDSGVYVLLSNIYATNERWDDVTRVRRLMKDKGIRKFPGSSVIEV 550
Query: 490 NGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGY 525
+G H+F+ GD+ + + I+ L + Q EG+
Sbjct: 551 DGEAHEFLVGDTNHSRNEDIHILLNILANQVYLEGH 586
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 169/532 (31%), Positives = 277/532 (52%), Gaps = 59/532 (11%)
Query: 17 ALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV---TSGYLINAHK 73
+ T+ L+ N+ + L QI + I + +++ AKL+ F T + A
Sbjct: 26 TVNTQNPILLISKCNSLRELMQIQAYAIKSHIEDVSFV-AKLINFCTESPTESSMSYARH 84
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGL 133
+FE P I+N M RG++R P + L+ ++++ PD YT+ LL CA
Sbjct: 85 LFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKA 144
Query: 134 FREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSL 193
EG Q+H + G NV++ L+N+Y EC
Sbjct: 145 LEEGRQLHCLSMKLGLDDNVYVCPTLINMY----TECE---------------------- 178
Query: 194 LKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQ 253
D+D A +FD + VV + MI+G A+ + +ALSLF EM+ + ++
Sbjct: 179 --------DVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNE 230
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
+ L++ LS+CA +G L LGKWIH Y +++ V +N ALI M+A CG +++A
Sbjct: 231 ITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCK----YVKVNTALIDMFAKCGSLDDAVS 286
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEALL---------------TFLGVLSACSHGGF 358
+F KM+ ++T +W++MI +A G A++++L TFLG+L+ACSH G
Sbjct: 287 IFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGR 346
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLL 418
V+EGR++F M +GI P I+HYG MVDL SRAG +++A+ + +P+ P + LL
Sbjct: 347 VEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILL 406
Query: 419 LGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
C HNN +LA +V++++ E+D Y+ L +N+YA K+W+ V ++R+ M
Sbjct: 407 AACSSHNNLDLAEKVSERIF-ELDDSHGGDYVIL-SNLYARNKKWEYVDSLRKVMKDRKA 464
Query: 479 RKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
K PG S +++N V+H+F +GD + +++ L E+ + GY PD S
Sbjct: 465 VKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTS 516
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 175/516 (33%), Positives = 280/516 (54%), Gaps = 58/516 (11%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H +I+ G + LL YV S +L +A K+F++ +T + +I+G+A S
Sbjct: 60 LHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVR 119
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
+++ L+ ++ +E P+++T++ +L CA G Q+H V+ G S+VF+
Sbjct: 120 FLEAIELFVRL-HREVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNA 178
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
LM++Y K G ++ + ++F E PHRN
Sbjct: 179 LMDVY----------------------------------AKCGRMENSMELFAESPHRND 204
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
V+W T+I G Q G +AL LF M RV +V +AL ACA + L+ G IHS
Sbjct: 205 VTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSL 264
Query: 279 -VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
V+ F + + NALI MYA CG I++A VF M +++ VSW +MI+G++ G
Sbjct: 265 TVKTTFDKD-----IVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHG 319
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+EAL LTF+GVLSAC++ G +D+G+ +F M Q+ GI+P IEHY
Sbjct: 320 LGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHY 379
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
CMV L R G +D+A L+ +P +P+ V +LL C IHN+ EL AQ+ V E++
Sbjct: 380 TCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQR-VLEME 438
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P+ A ++ L++N+YA AKRW +VA+VR+ M + GV+K PG SW++ G +H F GD++
Sbjct: 439 PQDKATHV-LLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTS 497
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ + +I L + M+ + GY P+ + + L +E+
Sbjct: 498 HPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVED 533
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 9/212 (4%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH +I G ++ L+ Y G + N+ ++F ++ + + WN +I GH +
Sbjct: 159 QIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLG 218
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
EK++ L+ M++ + E TYS L CA G Q+H + + + ++ +
Sbjct: 219 DGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTN 278
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L+++Y +CG + ARL+FD M + VSWN+++ GY G A +IFD+M
Sbjct: 279 ALIDMY----AKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQET 334
Query: 217 NV----VSWTTMISGCAQNGKSRQALSLFNEM 244
V +++ ++S CA G Q + F M
Sbjct: 335 EVKPDKLTFVGVLSACANAGLLDQGQAYFTSM 366
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 167/516 (32%), Positives = 274/516 (53%), Gaps = 56/516 (10%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+HS + FS+++ LL Y G L +A VF + + S + MI G+AR
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
++V L+++M ++ PD YT + +L+ CAR L EG++VH + + ++F+
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA 437
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
LM++Y K G + A +F EM +++
Sbjct: 438 LMDMY----------------------------------AKCGSMQEAELVFSEMRVKDI 463
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEM-RRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+SW T+I G ++N + +ALSLFN + R D+ + L ACA + G+ IH
Sbjct: 464 ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHG 523
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y+ N V N+L+ MYA CG + A+ +F + ++ VSWT MI G+ G
Sbjct: 524 YIMRNGYFSDRHVA----NSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHG 579
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+ +EA+ ++F+ +L ACSH G VDEG +FF M I+P +EHY
Sbjct: 580 FGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHY 639
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
C+VD+ +R G + +A+ ++NMP+ P+ + G+LL GCRIH++ +LA +VA+K V E++
Sbjct: 640 ACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEK-VFELE 698
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
PE GY L+AN+YA A++W+ V +R+++ + G+RK PG SW++I G ++ FVAGDS+
Sbjct: 699 PEN-TGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSS 757
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ I L ++ + ++EGY P + EE
Sbjct: 758 NPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEE 793
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 201/410 (49%), Gaps = 59/410 (14%)
Query: 18 LTTRQIFSLLQIRNTTKTLF---QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKV 74
+ R + S+LQ+ +K+L ++ + I NGF + + +KL Y G L A +V
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 75 FEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLF 134
F++ + WN ++ A+S S+ L+K+M+ E D YT+S + +
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 135 REGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLL 194
GEQ+HG +L SG+ G VG NSL+
Sbjct: 212 HGGEQLHGFILKSGF-----------------GERNSVG-----------------NSLV 237
Query: 195 KGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQV 254
Y+K +D A K+FDEM R+V+SW ++I+G NG + + LS+F +M + + +D
Sbjct: 238 AFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLA 297
Query: 255 ALVAALSACAEIGDLKLGKWIHSY-VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
+V+ + CA+ + LG+ +HS V+ FS RE N L+ MY+ CG+++ A
Sbjct: 298 TIVSVFAGCADSRLISLGRAVHSIGVKACFS--REDRFC---NTLLDMYSKCGDLDSAKA 352
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEA---------------LLTFLGVLSACSHGGF 358
VFR+M R+ VS+TSMI G+A++G A EA + T VL+ C+
Sbjct: 353 VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 412
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
+DEG++ E + +N + I ++D++++ G M EA + M +K
Sbjct: 413 LDEGKRVHEWIKEN-DLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK 461
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH I+ NG+ ++ L+ Y G L+ AH +F+ + W MI G+
Sbjct: 520 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHG 579
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
++++ L+ QM E DE ++ LL C+ GL EG
Sbjct: 580 FGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 619
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 177/542 (32%), Positives = 286/542 (52%), Gaps = 64/542 (11%)
Query: 40 HSQIIINGFSQK-NYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
H++ + + +Q+ N+ +L+ Y SG + + +F+ + + +N +I G A +
Sbjct: 76 HARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGR 135
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
++ ++ +M + +P EYT+ +L+ C + R G+Q+HGR++ NVF+
Sbjct: 136 GGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNA 195
Query: 159 LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKR----------------- 200
L +LY CG + AR LFD M R+VV+WN ++ GY+K
Sbjct: 196 LTDLY----ARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSN 251
Query: 201 ------------------GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
G ID A K+F E+ ++ V WT MI GCAQNGK AL LF+
Sbjct: 252 LKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFS 311
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVG-REPVLVSLNNALIHM 301
EM D + + +S+CA++ L G+ +H + F +G + +LVS +AL+ M
Sbjct: 312 EMLLENARPDGYTISSVVSSCAKLASLYHGQVVHG---KAFLMGVNDDLLVS--SALVDM 366
Query: 302 YASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTF 346
Y CG +A+ +F MQ RN VSW SMI G+A G EAL +TF
Sbjct: 367 YCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTF 426
Query: 347 LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP 406
+GVLSAC H G V+EG+++F M+ G++P +HY CMV+LF R+G MD+A L+ +M
Sbjct: 427 VGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMS 486
Query: 407 MKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDV 466
+PN + ++L C + + + A+ L+ E++P A Y+ L +N+YAA RW+DV
Sbjct: 487 QEPNSLIWTTVLSVCVMKGDIKHGEMAARCLI-ELNPFNAVPYIML-SNMYAARGRWKDV 544
Query: 467 AAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYK 526
A++R M V+K SW++I+ +H FVA D T+ A +I+ L + + + G+
Sbjct: 545 ASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQLNRLIRKLQEAGFS 604
Query: 527 PD 528
P+
Sbjct: 605 PN 606
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 150/299 (50%), Gaps = 35/299 (11%)
Query: 151 SNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIF 210
++ FI L+NLY SG + AR LFD+M R SWN++L Y K G ++ IF
Sbjct: 56 NDTFIHNRLLNLYAKSGE---ISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIF 112
Query: 211 DEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLK 270
D MP R+ VS+ T+ISG A NG+ AL +F M++ + + V+ L+AC ++ DL+
Sbjct: 113 DNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLR 172
Query: 271 LGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMI 330
GK IH + G V + NAL +YA CGEI++A +F +M RN V+W MI
Sbjct: 173 RGKQIHGRIIICNLGGN----VFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMI 228
Query: 331 TGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGI 375
+G+ K ++ + +T VL A G++DE R+ F + + +
Sbjct: 229 SGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEV 288
Query: 376 KPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM---KPNDAVLGSLLLGCRIHNNAELAS 431
I GC ++ G ++A L M + +P+ + S++ C A+LAS
Sbjct: 289 CWTIMIVGC-----AQNGKEEDALLLFSEMLLENARPDGYTISSVVSSC-----AKLAS 337
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 145/349 (41%), Gaps = 68/349 (19%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH +III ++ L Y G + A ++F++ + WN MI G+ ++
Sbjct: 176 QIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNR 235
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASG-YCSNVFIR 156
PEK + L+ +M +PD+ T S +L + G E +V G + C + I
Sbjct: 236 QPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMI- 294
Query: 157 TNLMNLYLMSGGECGVGCAR--------LLFDDM---PAR-------SVVS--------- 189
VGCA+ LLF +M AR SVVS
Sbjct: 295 ---------------VGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLY 339
Query: 190 --------------------WNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCA 229
++L+ Y K G AW IF M RNVVSW +MI G A
Sbjct: 340 HGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYA 399
Query: 230 QNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREP 289
NG+ +ALSL+ M + D V V LSAC G ++ GK + + + P
Sbjct: 400 LNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTP 459
Query: 290 VLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAKQG 337
+ +++++ G +++A + M Q N++ WT++++ +G
Sbjct: 460 DHYA---CMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKG 505
>gi|297833170|ref|XP_002884467.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330307|gb|EFH60726.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 185/504 (36%), Positives = 279/504 (55%), Gaps = 35/504 (6%)
Query: 21 RQIF-SLLQIRNTTKTLFQIHSQIIING-FSQKNYILAKLLAFYVTSGYLINAHKVFEKT 78
RQ F L++ + + QIH II++G S NY+ L+ FY+ G L A KVF
Sbjct: 132 RQTFLHLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGSLGFAEKVFAIM 191
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE 138
P + +N MI G+A+ +++ LY +M+ EPDEYT LL C R G+
Sbjct: 192 PQPDVSSFNVMIVGYAKQGFGLEALELYYKMVSDGIEPDEYTLLGLLVCCGHLSDIRLGK 251
Query: 139 QVHGRVLASG--YCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLK 195
VHG + G Y SN+ +R L+++Y +C G A+ FD + + + SWN+++
Sbjct: 252 GVHGWIERRGPVYSSNLILRNALLDMYF----KCKESGLAKRAFDALKKKDMRSWNTMVV 307
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQAL-SLFNEMRRA-RVGLDQ 253
G+V+ GD++ A +FD+MP R++VSW +++ ++ G ++A+ LF EM +V D+
Sbjct: 308 GFVRLGDMEAAQAVFDQMPQRDLVSWNSLLFCYSKKGCDQRAVRELFYEMLIVEKVKPDR 367
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
V +V+ +S A G+L G+W+H + G L++ALI MY CG IE A+
Sbjct: 368 VTMVSLISGAANNGELSHGRWVHGLMIRLQLEGD----AFLSSALIDMYCKCGLIERAFM 423
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGF 358
VF+ ++ WTSMITGFA GY Q+AL +T L VL+ACSH G
Sbjct: 424 VFKTATEKDVPLWTSMITGFAFHGYGQQALQLFKRMQEEDVTPNKVTLLAVLTACSHSGL 483
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQN-MPMKPNDAVLGSL 417
V+EG F M + +G P EHYG +VDL RAG ++EA +VQN MPM+P+ ++ GS+
Sbjct: 484 VEEGLHVFYHMKEKFGFHPETEHYGSLVDLLCRAGRLEEAKDIVQNKMPMRPSQSMWGSI 543
Query: 418 LLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMG 477
L CR + E A +L+ +++PE+ GY+ L++N+YA RW R+ M G
Sbjct: 544 LSACREGEDIETAELALSELL-KLEPEKEGGYV-LLSNIYATVGRWGYSDKTREAMESRG 601
Query: 478 VRKPPG-QSWVQINGVLHDFVAGD 500
V+K G S V + GV H FVA +
Sbjct: 602 VKKTAGYSSVVGVEGV-HSFVAAE 624
>gi|413946997|gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays]
Length = 505
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 157/403 (38%), Positives = 237/403 (58%), Gaps = 24/403 (5%)
Query: 151 SNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIF 210
S+ + ++L+ LY G V AR +FD+M R VV+WN ++ GYVK GD A ++F
Sbjct: 111 SDAHVSSSLVQLYCTCGH---VADARSVFDEMAVRDVVAWNVMIAGYVKAGDQAHARELF 167
Query: 211 DEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLK 270
D MP RNVVSWTT+I G AQ + +A+ +F M+ + D VAL++ L+AC ++G +
Sbjct: 168 DAMPERNVVSWTTVIGGYAQMKRPEKAVEVFRRMQVEGIEADGVALLSVLAACGDLGAVD 227
Query: 271 LGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMI 330
LG+W+H +V P++ N++I MY CG IE+A VF M+ ++ V+WT++I
Sbjct: 228 LGEWVHRFVVRRGLCQEIPLM----NSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLI 283
Query: 331 TGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGI 375
GFA G +A+ +TFL +LSACSH G D GR +F M + I
Sbjct: 284 AGFALHGLGLQAVEMFCRMERENMAPNAVTFLAILSACSHVGLTDLGRWYFNIMVSQYRI 343
Query: 376 KPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQ 435
KPR+EHYGCMVDL RAG + EA LV+NMP+K N A+ G+LL R H +A L Q
Sbjct: 344 KPRVEHYGCMVDLLGRAGCLKEAQDLVKNMPLKANAAIWGALLAAARTHGDAGLGEQALL 403
Query: 436 KLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHD 495
L+ E++P + Y+ L++N++A +RW DV+ +R+ M + G+R PG S ++++G++H+
Sbjct: 404 HLI-ELEPNNSGNYI-LLSNIFAEQERWGDVSKLRKAMRERGLRNVPGASSIEVDGMVHE 461
Query: 496 FVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
F + D ++ I + L EI G+ E+ IEE
Sbjct: 462 FTSRDWSHPFIHTICEVLCEIDTNMKSVGFASVFPEVLHVIEE 504
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 144/322 (44%), Gaps = 46/322 (14%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
++A YV +G +A ++F+ + W +I G+A+ + PEK+V ++++M + E D
Sbjct: 150 MIAGYVKAGDQAHARELFDAMPERNVVSWTTVIGGYAQMKRPEKAVEVFRRMQVEGIEAD 209
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCAR 176
+L+ C G GE VH V+ G C + + +++++Y+ +CG + A
Sbjct: 210 GVALLSVLAACGDLGAVDLGEWVHRFVVRRGLCQEIPLMNSIIDMYM----KCGCIEKAV 265
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
+F+ M +SVV+W TT+I+G A +G Q
Sbjct: 266 EVFEGMEEKSVVTW-------------------------------TTLIAGFALHGLGLQ 294
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
A+ +F M R + + V +A LSAC+ +G LG+W + + + + V
Sbjct: 295 AVEMFCRMERENMAPNAVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPR---VEHYG 351
Query: 297 ALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQGYA---QEALLTFLGVLSA 352
++ + G ++EA + + M + N W +++ G A ++ALL + L
Sbjct: 352 CMVDLLGRAGCLKEAQDLVKNMPLKANAAIWGALLAAARTHGDAGLGEQALLHLIE-LEP 410
Query: 353 CSHGGFVDEGRQFFECMNQNWG 374
+ G ++ F E + WG
Sbjct: 411 NNSGNYILLSNIFAE--QERWG 430
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 176/594 (29%), Positives = 301/594 (50%), Gaps = 74/594 (12%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
ML ++P N S + +L R Q+H ++GF +++ + L+
Sbjct: 105 MLTRGLMPDNRVLPSAVKACAGLSALKPAR-------QVHGIASVSGFDSDSFVQSSLVH 157
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y+ + +AH+VF++ P W+ ++ +AR +++ L+ +M D +P+ +
Sbjct: 158 MYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLIS 217
Query: 121 YSFLLSVCARCGLFRE-----------------------------------GEQVHGRVL 145
++ +++ GL+ E G +HG V+
Sbjct: 218 WNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVI 277
Query: 146 ASGYCSNVFIRTNLMNLYLMSGGECGVGCA-RLLFDDMPARSVVSWNSLLKGYVKRGDID 204
G S+ + + L+++Y G+C +FD M V S N+ + G + G ++
Sbjct: 278 KQGLVSDKCVSSALIDMY----GKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVE 333
Query: 205 GAWKIFDEMPHR----NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
+ ++F ++ + NVVSWT+MI+ C+QNG+ +AL LF EM+ A V + V + L
Sbjct: 334 SSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLL 393
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGRE-PVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
AC I L GK H FS+ R V + +ALI MYA CG I+ + F +
Sbjct: 394 PACGNIAALMHGKAAHC-----FSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIP 448
Query: 320 RRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQ 364
+N V W ++I G+A G A+EA+ ++F VLSACS G +EG
Sbjct: 449 TKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSY 508
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
+F M+ +GI+ R+EHY CMV L SRAG +++A+++++ MP+ P+ V G+LL CR+H
Sbjct: 509 YFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVH 568
Query: 425 NNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQ 484
NN L A+KL E++P Y+ L++N+YA+ W +V VR M G+RK PG
Sbjct: 569 NNVSLGEVAAEKLF-ELEPSNPGNYI-LLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGC 626
Query: 485 SWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
SW+++ +H +AGD ++ Q + I + L +++M+ + GY P+I+ + +EE
Sbjct: 627 SWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPEINFVLQDVEE 680
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 185/410 (45%), Gaps = 42/410 (10%)
Query: 23 IFSLLQIRNTTKTLFQI---HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTE 79
IF+ L +TT +L Q H+ I+ G ++ KLL+ Y + +A V +
Sbjct: 18 IFNCLN--STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVP 75
Query: 80 NPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
P+ ++ +I ++ ++ + QM+ + PD + CA + Q
Sbjct: 76 EPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQ 135
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYV 198
VHG SG+ S+ F++++L+++Y+ +C + A +FD M VVSW++L+ Y
Sbjct: 136 VHGIASVSGFDSDSFVQSSLVHMYI----KCNQIRDAHRVFDRMFEPDVVSWSALVAAYA 191
Query: 199 KRGDIDGAWKIFDEMP----HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQV 254
++G +D A ++F EM N++SW MI+G +G +A+ +F +M D
Sbjct: 192 RQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGT 251
Query: 255 ALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGV 314
+ + L A ++ DL +G IH YV + V + V ++ALI MY C E V
Sbjct: 252 TISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCV----SSALIDMYGKCSCTSEMSQV 307
Query: 315 FRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWG 374
F +M + S + I G ++ G + +L F RQ ++ G
Sbjct: 308 FDQMDHMDVGSCNAFIFGLSRNGQVESSLRLF----------------RQL-----KDQG 346
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM---KPNDAVLGSLLLGC 421
++ + + M+ S+ G EA L + M + KPN + LL C
Sbjct: 347 MELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPAC 396
>gi|356502400|ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 591
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 170/475 (35%), Positives = 267/475 (56%), Gaps = 33/475 (6%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH+ ++ G Y+ L+ Y G + +VFE+ WN MI G+ R +
Sbjct: 129 KIHAFVVKTGLEFDPYVCNSLMDMYAELGLVEGFTQVFEEMPERDAVSWNIMISGYVRCK 188
Query: 98 TPEKSVYLYKQM-IDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
E++V +Y++M ++ +P+E T LS CA G+++H Y +N
Sbjct: 189 RFEEAVDVYRRMQMESNEKPNEATVVSTLSACAVLRNLELGKEIHD------YIANELDL 242
Query: 157 TNLM-NLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP 214
T +M N L +CG V AR +FD M ++V W S++ GYV G +D A +F+ P
Sbjct: 243 TPIMGNALLDMYCKCGCVSVAREIFDAMIVKNVNCWTSMVTGYVICGQLDQARYLFERSP 302
Query: 215 HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKW 274
R+VV WT MI+G Q A++LF EM+ V D+ +V L+ CA++G L+ GKW
Sbjct: 303 SRDVVLWTAMINGYVQFNHFEDAIALFGEMQIRGVEPDKFIVVTLLTGCAQLGALEQGKW 362
Query: 275 IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
IH+Y++EN R + ++ ALI MYA CG IE++ +F ++ +T SWTS+I G A
Sbjct: 363 IHNYIDEN----RIKMDAVVSTALIEMYAKCGCIEKSLEIFNGLKDMDTTSWTSIICGLA 418
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
G EAL +TF+ VLSAC H G V+EGR+ F M+ + I+P +
Sbjct: 419 MNGKTSEALELFEAMQTCGLKPDDITFVAVLSACGHAGLVEEGRKLFHSMSSIYHIEPNL 478
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL---GSLLLGCRIHNNAELASQVAQK 436
EHYGC +DL RAGL+ EA LV+ +P + N+ ++ G+LL CR + N ++ ++A
Sbjct: 479 EHYGCFIDLLGRAGLLQEAEELVKKLPDQNNEIIVPLYGALLSACRTYGNIDMGERLATA 538
Query: 437 LVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQING 491
L A++ ++ + L+A++YA+A RW+DV VR KM +G++K PG S ++++G
Sbjct: 539 L-AKVKSSDSSLH-TLLASIYASADRWEDVRKVRSKMKDLGIKKVPGYSAIEVDG 591
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 155/325 (47%), Gaps = 40/325 (12%)
Query: 24 FSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKTENP 81
SLL+ + L QI + I G Q IL KL+AF + S G A+++F +P
Sbjct: 12 ISLLKSCKSMSQLKQIQAHIFCFGLQQDRDILNKLMAFSMDSSLGDFNYANRIFNHIHHP 71
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVH 141
S I+N MI+ + + ++ L++Q+ ++ PD YTY ++L G REGE++H
Sbjct: 72 SLFIYNLMIKAFVKRGSLRSAISLFQQLRERGVWPDNYTYPYVLKGIGCIGEVREGEKIH 131
Query: 142 GRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRG 201
V+ +G + ++ +LM++Y G G +F++MP R VSWN ++ GYV+
Sbjct: 132 AFVVKTGLEFDPYVCNSLMDMYAELGLVEGF---TQVFEEMPERDAVSWNIMISGYVRCK 188
Query: 202 DIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALS 261
+ A ++ M + N K +A +V+ LS
Sbjct: 189 RFEEAVDVYRRMQMES-------------NEKPNEA-----------------TVVSTLS 218
Query: 262 ACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR 321
ACA + +L+LGK IH Y+ + P+ + NAL+ MY CG + A +F M +
Sbjct: 219 ACAVLRNLELGKEIHDYIANELDL--TPI---MGNALLDMYCKCGCVSVAREIFDAMIVK 273
Query: 322 NTVSWTSMITGFAKQGYAQEALLTF 346
N WTSM+TG+ G +A F
Sbjct: 274 NVNCWTSMVTGYVICGQLDQARYLF 298
>gi|414869795|tpg|DAA48352.1| TPA: hypothetical protein ZEAMMB73_382586 [Zea mays]
Length = 687
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 172/511 (33%), Positives = 269/511 (52%), Gaps = 64/511 (12%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
H+ ++ G ++ ++ L+ Y + L +A KVF++ WN + R
Sbjct: 224 HAHVVKLGSAEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVR---- 279
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
+ V + M D+ E D +++ +L A+ G E E+
Sbjct: 280 QGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAG---EAEK-------------------- 316
Query: 160 MNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVV 219
A LF MP R+VVSW++++ Y K+GD++ A IFD+MP +N+V
Sbjct: 317 ---------------AFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLV 361
Query: 220 SWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV 279
+WT M+S CAQ G +A LF EM A + LD +A+V+ L+ACAE G L LGK IH +V
Sbjct: 362 TWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAESGSLALGKRIHRHV 421
Query: 280 EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF-RKMQRRNTVSWTSMITGFAKQGY 338
+ + R ++ NAL+ M+ CG + A +F ++ ++ VSW +I GFA G
Sbjct: 422 RQR-KLSRSTLVC---NALMDMFCKCGCVNRADYIFDTEIVEKDLVSWNIIIGGFAMHGP 477
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
++AL +T + VLSAC+H G V+EGR+FF M ++GIKP+IEHYG
Sbjct: 478 GEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPQIEHYG 537
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
CMVDL R GL+ EA +++ MP +PN+ + GSLL CR+H N E A ++A ++ + P
Sbjct: 538 CMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSLLSACRLHKNVEYA-ELAVNELSNLQP 596
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
A Y A+++N+YA A +W D+A R +M G +K G SW+++N H+F GD +
Sbjct: 597 SSAGNY-AVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELNEAFHEFTVGDRKH 655
Query: 504 KQASLIYKTLGEITMQAMQEGYKPDISELFL 534
++ I + ++ G P ELF+
Sbjct: 656 PESDQISDMIDRLSSHVKFVGCVPVGHELFV 686
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 174/497 (35%), Positives = 273/497 (54%), Gaps = 28/497 (5%)
Query: 58 LLAFYVTSGYLINAHKVFE-KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEP 116
++ YV +GY ++ E +N +N MI G+ ++++ + ++M+ E
Sbjct: 225 MMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIEL 284
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCA 175
DE+TY ++ CA GL + G+QVH VL S F +L++LY +CG A
Sbjct: 285 DEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHF-DNSLVSLYY----KCGKFDEA 339
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
R +F+ MPA+ +VSWN+LL GYV G I A IF EM +N++SW MISG A+NG
Sbjct: 340 RAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGE 399
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
+ L LF+ M+R A A+ +CA +G G+ H+ + +G + L S
Sbjct: 400 EGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQL---LKIGFDSSL-SAG 455
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------ 343
NALI MYA CG +EEA VFR M ++VSW ++I + G+ EA+
Sbjct: 456 NALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIR 515
Query: 344 ---LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFS 400
+T L VL+ACSH G VD+GR++F+ M + I P +HY ++DL R+G +A S
Sbjct: 516 PDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAES 575
Query: 401 LVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAA 460
+++++P KP + +LL GCR+H N EL A KL I PE Y+ L++N++AA
Sbjct: 576 VIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLI-PEHDGTYM-LLSNMHAAT 633
Query: 461 KRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQA 520
+W++VA VR+ M GV+K SW+++ +H F+ D+++ +A +Y L ++ +
Sbjct: 634 GQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEM 693
Query: 521 MQEGYKPDISELFLGIE 537
+ GY PD S + +E
Sbjct: 694 RRLGYVPDTSFVLHDVE 710
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 188/402 (46%), Gaps = 60/402 (14%)
Query: 27 LQIRNTTKTLFQ-IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPS--- 82
L +R T+ L + +H II GF + +IL +L+ Y S L A ++F++ P
Sbjct: 23 LPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIA 82
Query: 83 ------------------------------TAIWNQMIRGHARSETPEKSVYLYKQMIDK 112
T ++N MI G + + ++ L+ +M +
Sbjct: 83 RTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHE 142
Query: 113 ETEPDEYTYSFLLSVCARCGLFREGE----QVHGRVLASGYCSNVFIRTNLMNLYLMSGG 168
+PD +T++ SV A L + E Q H L SG + L+++Y
Sbjct: 143 GFKPDNFTFA---SVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCAS 199
Query: 169 ECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM-PHRNVVSWTTMIS 226
+ AR +FD++ + SW +++ GYVK G D ++ + M + +V++ MIS
Sbjct: 200 SPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMIS 259
Query: 227 GCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVG 286
G G ++AL + M + + LD+ + + ACA G L+LGK +H+YV +
Sbjct: 260 GYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV-----LR 314
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEA---- 342
RE +N+L+ +Y CG+ +EA +F KM ++ VSW ++++G+ G+ EA
Sbjct: 315 REDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIF 374
Query: 343 -------LLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
+L+++ ++S + GF +EG + F CM + G +P
Sbjct: 375 KEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKRE-GFEP 415
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 165/385 (42%), Gaps = 50/385 (12%)
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVK 199
VHG ++ G+ I L+++Y S + AR LFD++ ++ +++ GY
Sbjct: 36 VHGNIITFGFQPRAHILNRLIDVYCKSSE---LNYARQLFDEISEPDKIARTTMVSGYCA 92
Query: 200 RGDIDGAWKIFDEMP--HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
GDI A +F++ P R+ V + MI+G + N A++LF +M+ D
Sbjct: 93 SGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFA 152
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGE----IEEAYG 313
+ L+ A + D + K + G + S++NAL+ +Y+ C + A
Sbjct: 153 SVLAGLALVADDE--KQCVQFHAAALKSG-AGYITSVSNALVSVYSKCASSPSLLHSARK 209
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNW 373
VF ++ ++ SWT+M+TG+ K GY D G + E M+ N
Sbjct: 210 VFDEILEKDERSWTTMMTGYVKNGY--------------------FDLGEELLEGMDDNM 249
Query: 374 GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM---PMKPNDAVLGSLLLGCRIHNNAELA 430
++ Y M+ + G EA +V+ M ++ ++ S++ C +L
Sbjct: 250 ----KLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLG 305
Query: 431 SQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQIN 490
QV ++ D + + + ++Y ++ + A+ +KM P + V N
Sbjct: 306 KQVHAYVLRRED--FSFHFDNSLVSLYYKCGKFDEARAIFEKM--------PAKDLVSWN 355
Query: 491 GVLHDFVAGDSTYKQASLIYKTLGE 515
+L +V+ +A LI+K + E
Sbjct: 356 ALLSGYVSSGHI-GEAKLIFKEMKE 379
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q H+Q++ GF L+ Y G + A +VF + WN +I +
Sbjct: 438 QYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHG 497
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
++V +Y++M+ K PD T +L+ C+ GL +G +
Sbjct: 498 HGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRK 539
>gi|359497788|ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 176/530 (33%), Positives = 283/530 (53%), Gaps = 50/530 (9%)
Query: 19 TTRQIFSLLQIRNTTKTLFQIHS-QIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEK 77
+ ++F +L ++NT HS III+ +S+ SG AH + ++
Sbjct: 67 SAHKVFHVLPVKNT-------HSWNIIISAYSR--------------SGLFNEAHNLLDQ 105
Query: 78 TENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEP--DEYTYSFLLSVCARCGLFR 135
P+ +N +I G ++S+ ++K M+ + + DE+T L+ CA G
Sbjct: 106 MPKPNLVSYNSLISGLGHHGFRKESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPE 165
Query: 136 EGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLL 194
QVHG + G SN+ I L++ Y G+CG + +F MP R VVSW S++
Sbjct: 166 LLRQVHGAAIIIGLNSNIIIGNALIDAY----GKCGEPDISFSIFSRMPERDVVSWTSMV 221
Query: 195 KGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQV 254
Y + ++ A +F +M +N VSWT +I+G AQNG+ +AL LF +MR +
Sbjct: 222 AAYAQASRLEDAHWLFSQMQEKNTVSWTALIAGFAQNGRGDEALHLFEQMREEGIPPSAF 281
Query: 255 ALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGV 314
+ LSACA++ + GK IH ++ + + + L NALI MY CG++ A +
Sbjct: 282 TFASVLSACADLALIARGKEIHGHIIRSTCIDYFCNIFIL-NALIDMYCKCGQMRSATTL 340
Query: 315 FRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFV 359
F+ M ++ VSW S+ITGFA+ G+ +E+L +TFLG+LSAC H G V
Sbjct: 341 FKGMHEKDIVSWNSLITGFAQNGHGEESLAVFERMIEADIRPNHVTFLGLLSACCHTGLV 400
Query: 360 DEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAV--LGSL 417
EG + + M +++G+ PR +HY M+DL R ++EA L++ P K +D V G+L
Sbjct: 401 SEGLRILDSMEKDYGVCPRSDHYAIMIDLLGRNNRLEEAMGLIKRAP-KGSDHVGMWGAL 459
Query: 418 LLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMG 477
L CRIH N +LA + A+ L +++P AA Y+ +V N+YAAA RW + VR+ M++ G
Sbjct: 460 LGACRIHGNMDLARRAAEVLF-QLEPGNAARYV-MVYNIYAAASRWDEARQVRRLMMERG 517
Query: 478 VRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
+RK SW+++ H FVA + ++ Q + +Y+ + + Q GY P
Sbjct: 518 LRKEAACSWIEVRNTRHQFVAKERSHCQINEVYEVIHNLVDQMYDSGYLP 567
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 15/121 (12%)
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
+S C LKLGK +HS+ + + L N LI Y+ C I+ A+ VF +
Sbjct: 21 ISKCITTRHLKLGKLLHSHFIKTALI----FTTFLANRLIDFYSKCDSIQSAHKVFHVLP 76
Query: 320 RRNTVSWTSMITGFAKQGYAQEA-----------LLTFLGVLSACSHGGFVDEGRQFFEC 368
+NT SW +I+ +++ G EA L+++ ++S H GF E F+
Sbjct: 77 VKNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGFRKESLNVFKT 136
Query: 369 M 369
M
Sbjct: 137 M 137
>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
Length = 583
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 168/494 (34%), Positives = 260/494 (52%), Gaps = 59/494 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H ++ G +Y+ L+ Y G A KVF++ WN +I G ++
Sbjct: 126 QVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAG 185
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++++ ++ +M + EP T +L+ CAR G G+ +HG V R
Sbjct: 186 HFDEAISVFFRM---DVEPSMTTLVSVLAACARNGDLCTGKGIHG----------VIERR 232
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
+NL L N++L YVK G A IFDE+P R+
Sbjct: 233 FKVNLVL-------------------------GNAMLDMYVKNGCFYEAKNIFDELPTRD 267
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+VSWT MI+G Q+ +Q+L LF+ MR + D + L + LSACA +G L G W+H
Sbjct: 268 IVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHE 327
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y+ + + + + + A++ MYA CG IE A +F M +RNT +W +++ G A G
Sbjct: 328 YINQR-GIKWD---IHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHG 383
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
EAL +TFL +L+AC H G VDEGR++F+ M++ + + P++EHY
Sbjct: 384 LVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHY 443
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
GCM+DLF RAGL++EA L + MPMKP+ + G LL C N EL+ ++ Q + E+D
Sbjct: 444 GCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLLNACTTVGNIELSHRI-QDYILELD 502
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
+ +G L++N+ A +RW +V +R+ M GVRK PG S ++++G H+FV GD +
Sbjct: 503 HDD-SGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKAPGSSVIEVDGKAHEFVVGDIS 561
Query: 503 YKQASLIYKTLGEI 516
+ Q IYK L I
Sbjct: 562 HLQTEEIYKVLNLI 575
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 122/407 (29%), Positives = 196/407 (48%), Gaps = 67/407 (16%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI----WNQMIRGH 93
QIH+Q++ +G +++ +K++ F+ + ++ + E +T + +N +I G+
Sbjct: 23 QIHAQLVTSGLVYDDFVTSKVMEFF--ANFVEYGDYACDYLEQGNTRLGSFPFNSLINGY 80
Query: 94 ARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNV 153
E P+ +V +Y++M+ PD +T+ LL C+ REG QVHG V+ G ++
Sbjct: 81 VGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHGVVVKLGLLADH 140
Query: 154 FIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDE 212
+++ +L+ Y G CG CA +FD+M R VVSWNSL+ G++K G D A +F
Sbjct: 141 YVQNSLIRCY----GACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAISVFFR 196
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
M S TT++S L+ACA GDL G
Sbjct: 197 MDVEP--SMTTLVS--------------------------------VLAACARNGDLCTG 222
Query: 273 KWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
K IH +E F V + L NA++ MY G EA +F ++ R+ VSWT MITG
Sbjct: 223 KGIHGVIERRFKVN-----LVLGNAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITG 277
Query: 333 FAKQGYAQEALLTF-----LG----------VLSACSHGGFVDEGRQFFECMNQNWGIKP 377
+ + +++L F LG VLSAC+ G +D G E +NQ GIK
Sbjct: 278 LVQSDHPKQSLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEYINQR-GIKW 336
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
I +VD++++ G ++ A + +M + N +LL G +H
Sbjct: 337 DIHIGTAIVDMYAKCGCIEMALKIFYSMSQR-NTFTWNALLCGLAMH 382
>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 172/519 (33%), Positives = 275/519 (52%), Gaps = 61/519 (11%)
Query: 38 QIHSQIII--NGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHAR 95
Q+H+Q++ N F N + L+ + + Y A +F + + P T +N MIRG+
Sbjct: 6 QVHAQVLKWENSFCASNLVATCALSDWGSMDY---ACSIFRQIDQPGTFEFNTMIRGYVN 62
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
E +++LY +M+++ E D +TY L CA EG Q+HG + G ++F+
Sbjct: 63 VMNMENALFLYYEMLERGVESDNFTYPALFKACASLRSIEEGMQIHGYIFKRGLEGDLFV 122
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
+ +L+N+Y G+C G I+ + +F+ M
Sbjct: 123 QNSLINMY----GKC------------------------------GKIELSCSVFEHMDR 148
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEM-RRARVGLDQVALVAALSACAEIGDLKLGKW 274
R+V SW+ +I+ A G + LS+F EM R ++ LV+ LSAC +G L LG+
Sbjct: 149 RDVASWSAIIAAHASLGMWSECLSVFGEMSREGSCRPEESILVSVLSACTHLGALDLGRC 208
Query: 275 IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
H + N RE + V + +LI MY CG IE+ +F++M ++N +S++ MITG A
Sbjct: 209 THVTLLRNI---RE-MNVIVQTSLIDMYVKCGCIEKGLSLFQRMVKKNQLSYSVMITGLA 264
Query: 335 KQGYAQEALLTF---------------LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
G EAL F LGVLSAC+H G VDEG Q F M GI+P I
Sbjct: 265 MHGRGMEALQVFSDMLEEGLKPDDVVYLGVLSACNHAGLVDEGLQCFNRMKLEHGIEPTI 324
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
+HYGC+V L RAG++++A +++MP+KPN+ V LL C+ H+N E+ ++A K +
Sbjct: 325 QHYGCIVHLMGRAGMLNKALEHIRSMPIKPNEVVWRGLLSACKFHHNLEIG-EIAAKSLG 383
Query: 440 EIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG 499
E++ Y+ L +N+YA AKRW+DVA +R +M + G + PG S VQ+ ++ FV+
Sbjct: 384 ELNSSNPGDYVVL-SNMYARAKRWEDVAKIRTEMARKGFTQTPGFSLVQVERKIYKFVSQ 442
Query: 500 DSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
D ++ Q +Y+ + ++ Q EGY PD S++ ++E
Sbjct: 443 DMSHPQCKGMYEMIHQMEWQLKFEGYSPDTSQVLFDVDE 481
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 164/497 (32%), Positives = 265/497 (53%), Gaps = 55/497 (11%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
L+ Y + GY+ +A K+F++ WN MI G+A + ++++ L+K+M+ PD
Sbjct: 175 LITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPD 234
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
E T ++S CA+ G QVH + G+ SN+ I L++LY
Sbjct: 235 ESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLY-------------- 280
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
+K G+++ A +F+ + +++V+SW T+I G ++A
Sbjct: 281 --------------------IKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEA 320
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFS-VGREPVLVSLNN 296
L LF EM R+ + V +++ L ACA +G +++G+WIH Y+ + V S
Sbjct: 321 LLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANAS---SHRT 377
Query: 297 ALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------- 343
+LI MYA CG+IE A VF + R+ SW +MI GFA G A A
Sbjct: 378 SLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEP 437
Query: 344 --LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
+TF+G+LSACSH G +D GR F M +++ I P++EHYGCM+DL +GL EA +
Sbjct: 438 DDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEM 497
Query: 402 VQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAK 461
+ M M+P+ + SLL C+++ N EL AQ L+ +I+P+ Y+ L++N+YA A
Sbjct: 498 INTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLI-KIEPKNPGSYV-LLSNIYATAG 555
Query: 462 RWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAM 521
RW +VA +R + G++K PG S ++I+ V+H+F+ GD + + IY L E+ +
Sbjct: 556 RWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLE 615
Query: 522 QEGYKPDISELFLGIEE 538
+ G+ PD SE+ +EE
Sbjct: 616 EAGFVPDTSEVLQEMEE 632
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/445 (34%), Positives = 248/445 (55%), Gaps = 34/445 (7%)
Query: 24 FSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY---LINAHKVFEKTEN 80
SLL T ++L IH+Q+I G NY L+KL+ F V S + L A VFE +
Sbjct: 6 LSLLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQE 65
Query: 81 PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
P+ IWN M RGHA S P ++YLY MI P+ YT+ FLL CA+ FREG+Q+
Sbjct: 66 PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQI 125
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKR 200
HG VL GY ++++ T+L+++Y+ +G + AR +FD R VVS+ +L+ GY +
Sbjct: 126 HGHVLKLGYDLDLYVHTSLISMYVQNGR---LEDARKVFDQSSHRDVVSYTALITGYASK 182
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
G I A K+FDE+P ++VVSW MISG A+ G +++AL LF EM + V D+ +V+ +
Sbjct: 183 GYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVV 242
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
SACA+ ++LG+ +HS+++++ G +V NALI +Y CGE+E A G+F +
Sbjct: 243 SACAQSASIELGRQVHSWIDDH-GFGSNLKIV---NALIDLYIKCGEVETACGLFEGLSY 298
Query: 321 RNTVSWTSMITGFAKQGYAQEALLTF---------------LGVLSACSHGGFVDEGRQF 365
++ +SW ++I G+ +EALL F L +L AC+H G ++ GR
Sbjct: 299 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWI 358
Query: 366 FECMNQNW-GIKPRIEHYGCMVDLFSRAGLMDEA---FSLVQNMPMKPNDAVLGSLLLGC 421
+N+ G+ H ++D++++ G ++ A F + N + +A ++ G
Sbjct: 359 HVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNA----MIFGF 414
Query: 422 RIHNNAELASQVAQKLVA-EIDPEQ 445
+H A A + ++ EI+P+
Sbjct: 415 AMHGRANAAFDIFSRMRKNEIEPDD 439
>gi|357498595|ref|XP_003619586.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
gi|355494601|gb|AES75804.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
Length = 528
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 176/520 (33%), Positives = 279/520 (53%), Gaps = 43/520 (8%)
Query: 23 IFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAF-YVTSGYLINAHKVFEKTENP 81
+ ++L N L Q+ S + G SQ ++ KL+ F + L AH++F +P
Sbjct: 9 VTTILTKINHLNQLKQLQSHLTTLGHSQTHFYAFKLIRFCSLNLSNLHYAHQIFNHIHSP 68
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVH 141
+ ++ +I A S + L+K M++ P+ + Y +L L + VH
Sbjct: 69 NIYLFTAIIT--AFSSQQHTTFKLFKTMLNSNIRPNNFIYPHVLKSVKERFLV---DLVH 123
Query: 142 GRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRG 201
+++ G+ + + T+L++ Y G G+ A +FD+M R++V + L+ GY++ G
Sbjct: 124 AQIVKCGFLNYPVVETSLVDSYSKVLG--GLRDAHKVFDEMSERNIVVFTVLVSGYLRVG 181
Query: 202 DIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL---------- 251
D++ +FDEM R+V +W +ISGC QNG + + LF EM A GL
Sbjct: 182 DVEKGLMVFDEMVDRDVPAWNAVISGCTQNGFFSEGIRLFREMVFA-AGLGEGGFCKGNK 240
Query: 252 -DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEE 310
+QV +V LSAC G L+LGKWIH YV + V V ++NAL+ MY CG +E
Sbjct: 241 PNQVTVVCVLSACGHGGMLQLGKWIHGYVYRHGFV----VDSFVSNALVDMYGKCGSLEL 296
Query: 311 AYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-----------------LTFLGVLSAC 353
A VF QR+ SW SMI +A G ++A+ +TF+G+L+AC
Sbjct: 297 ARKVFEMDQRKGLTSWNSMINCYALHGKCEDAITFFEKMVECGGGVRPDEVTFIGLLNAC 356
Query: 354 SHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAV 413
+HGG V++G +FE M + +GI+P+I HYGC++DL RAG DEA +V+ M M+P++ V
Sbjct: 357 THGGLVEQGCGYFEMMIKEYGIEPQIAHYGCLIDLLGRAGQFDEAMDVVKGMSMEPDEVV 416
Query: 414 LGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKM 473
GSLL GC++H +LA A+KLV EIDP GY ++AN+Y +W ++ V K+
Sbjct: 417 WGSLLNGCKVHGRTDLAEFAAKKLV-EIDPHN-GGYGTMLANIYGQLGKWDEMRNVWSKL 474
Query: 474 IKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTL 513
+ K PG SW++++ +H F + D + + +Y L
Sbjct: 475 KQQKSYKIPGCSWIEVDDKVHQFFSLDQSNPKTEELYNIL 514
>gi|219363695|ref|NP_001136685.1| uncharacterized protein LOC100216817 [Zea mays]
gi|194696634|gb|ACF82401.1| unknown [Zea mays]
Length = 615
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 172/511 (33%), Positives = 269/511 (52%), Gaps = 64/511 (12%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
H+ ++ G ++ ++ L+ Y + L +A KVF++ WN + R
Sbjct: 152 HAHVVKLGSAEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVR---- 207
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
+ V + M D+ E D +++ +L A+ G E E+
Sbjct: 208 QGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAG---EAEK-------------------- 244
Query: 160 MNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVV 219
A LF MP R+VVSW++++ Y K+GD++ A IFD+MP +N+V
Sbjct: 245 ---------------AFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLV 289
Query: 220 SWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV 279
+WT M+S CAQ G +A LF EM A + LD +A+V+ L+ACAE G L LGK IH +V
Sbjct: 290 TWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAESGSLALGKRIHRHV 349
Query: 280 EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF-RKMQRRNTVSWTSMITGFAKQGY 338
+ + R ++ NAL+ M+ CG + A +F ++ ++ VSW +I GFA G
Sbjct: 350 RQR-KLSRSTLVC---NALMDMFCKCGCVNRADYIFDTEIVEKDLVSWNIIIGGFAMHGP 405
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
++AL +T + VLSAC+H G V+EGR+FF M ++GIKP+IEHYG
Sbjct: 406 GEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPQIEHYG 465
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
CMVDL R GL+ EA +++ MP +PN+ + GSLL CR+H N E A ++A ++ + P
Sbjct: 466 CMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSLLSACRLHKNVEYA-ELAVNELSNLQP 524
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
A Y A+++N+YA A +W D+A R +M G +K G SW+++N H+F GD +
Sbjct: 525 SSAGNY-AVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELNEAFHEFTVGDRKH 583
Query: 504 KQASLIYKTLGEITMQAMQEGYKPDISELFL 534
++ I + ++ G P ELF+
Sbjct: 584 PESDQISDMIDRLSSHVKFVGCVPVGHELFV 614
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 171/521 (32%), Positives = 288/521 (55%), Gaps = 29/521 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH +I GF Y+ L+ FY L A++VF + NP +WN+ I + +SE
Sbjct: 544 EIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSE 603
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVC-ARCGLFREGEQVHGRVLASGYCSNVFIR 156
+K V L+++M + + T +L + G G++ HG VL +G+ +V++
Sbjct: 604 KLQKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVG 663
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
T+L+++Y+ + + A+ +FD+M R++ +WNSL+ GY +G + A ++ ++M
Sbjct: 664 TSLIDMYVKNHS---LTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKE 720
Query: 217 ----NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
++V+W MISG A G ++AL+ F +M++ V + ++ L ACA + L+ G
Sbjct: 721 GIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKG 780
Query: 273 KWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
K IH N + E V V+ ALI MY+ ++ A+ VFR++Q + SW MI G
Sbjct: 781 KEIHCLSIRNGFI--EDVFVA--TALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMG 836
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
FA G +EA+ +TF +LSAC + G + EG ++F+ M ++ I P
Sbjct: 837 FAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVP 896
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
R+EHY CMVDL RAG +DEA+ L+ MP+KP+ + G+LL CRIH N + A A+ L
Sbjct: 897 RLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNL 956
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
+++P +A Y+ L+ N+Y+ RW+D+ +R+ M GVR SW+QIN +H F
Sbjct: 957 F-KLEPNNSANYI-LMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFS 1014
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ + + A IY L ++ + + GY PD++ ++ ++E
Sbjct: 1015 SDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDE 1055
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 149/373 (39%), Gaps = 72/373 (19%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVY-LYKQMIDKETEP 116
L++ Y+ G +A VF + WN + S V ++K++ K
Sbjct: 462 LISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVF 521
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGEC-GVGCA 175
D YS L C R G ++HG ++ G+ +V++R LMN Y G C G+ A
Sbjct: 522 DSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFY----GRCWGLEKA 577
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
+F +MP + WN I Q+ K +
Sbjct: 578 NQVFHEMPNPEALLWNE-------------------------------AIILNLQSEKLQ 606
Query: 236 QALSLFNEMRRARVGLDQVALVAALSAC-AEIGDLKLGKWIHSYVEEN-FSVGREPVLVS 293
+ + LF +M+ + + + +V L A +E+G L +GK H YV N F V
Sbjct: 607 KGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCD-----VY 661
Query: 294 LNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSAC 353
+ +LI MY + A VF M+ RN +W S+++G++ +G ++AL
Sbjct: 662 VGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDAL---------- 711
Query: 354 SHGGFVDEGRQFFECMNQ--NWGIKPRIEHYGCMVDLFSRAGLMDEA---FSLVQNMPMK 408
+NQ GIKP + + M+ ++ G EA F+ +Q +
Sbjct: 712 -------------RLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVM 758
Query: 409 PNDAVLGSLLLGC 421
PN A + LL C
Sbjct: 759 PNSASITCLLRAC 771
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 58/142 (40%), Gaps = 7/142 (4%)
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ-ALSLFNEMRRARV 249
+L+ Y+ GD A +F RN + W + + + S L +F E+ V
Sbjct: 460 KNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGV 519
Query: 250 GLDQVALVAALSACAEIGDLKLGKWIHS-YVEENFSVGREPVLVSLNNALIHMYASCGEI 308
D AL C + D+ LG IH ++ F + V L AL++ Y C +
Sbjct: 520 VFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLD-----VYLRCALMNFYGRCWGL 574
Query: 309 EEAYGVFRKMQRRNTVSWTSMI 330
E+A VF +M + W I
Sbjct: 575 EKANQVFHEMPNPEALLWNEAI 596
>gi|115486527|ref|NP_001068407.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|108864631|gb|ABG22570.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645629|dbj|BAF28770.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|215694601|dbj|BAG89792.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215701272|dbj|BAG92696.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 610
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 170/517 (32%), Positives = 280/517 (54%), Gaps = 26/517 (5%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H++I+ G + A L++ Y S L +A +F++T I++ ++ + S +
Sbjct: 25 MHARILKEGLAHHPPNPAALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSAS 84
Query: 99 PEKSVYLYKQMIDKET-EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
PE ++ + + M+ + PD + S + SV AR R G Q+H + S Y + +++
Sbjct: 85 PELALPILRCMLSADALHPDHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVKS 144
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
+L+++Y G R +FD M A++ V W +L+ GY G + A ++F MP RN
Sbjct: 145 SLVDMYCKCGSPDD---GRKVFDSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRN 201
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQV-ALVAALSACAEIGDLKLGKWIH 276
+ +WT +ISG G+S A+ LF EMRR V +D L + A++ LG+ +H
Sbjct: 202 LFAWTALISGLVNTGESVGAVELFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLH 261
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+G ++ + NALI MY+ C +I A VF + R+ +SWT+M+ G A+
Sbjct: 262 G---STMRLGFLSNMI-VGNALIDMYSKCSDILSAREVFEGITFRDVISWTTMVVGEAQH 317
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G A+EAL +TF+G++ ACSH G V +GRQ FE M +GI PR++H
Sbjct: 318 GRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQH 377
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
Y C +DL SR+G + EA L+ MP +P++A G+LL C + +AE+ +++ KL+ E+
Sbjct: 378 YTCYLDLLSRSGHLLEAEELMTTMPYEPDEATWGALLSACTKYKDAEMCIRISDKLL-EL 436
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
P+ ++ Y+ L++NVYA +W VA VR+ MI + +RK PG SW++ F AG+
Sbjct: 437 RPKDSSTYI-LLSNVYAVNGKWDSVAKVRKCMIGLEIRKEPGYSWIEAGREFRLFHAGEV 495
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
I L E+ ++ + GY PD S + +EE
Sbjct: 496 PLDVREEIMVFLEEMVLEMRKRGYVPDTSSVMHDLEE 532
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 112/261 (42%), Gaps = 44/261 (16%)
Query: 22 QIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENP 81
+F+ L+ R + Q+H+ +++ ++ + + + L+ Y G + KVF+
Sbjct: 113 SVFARLRSRRLGR---QLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAK 169
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMI------------------------------- 110
++ +W ++ G+A + E+++ L++ M
Sbjct: 170 NSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMR 229
Query: 111 -DKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGE 169
D D + S ++ A F G Q+HG + G+ SN+ + L+++Y +
Sbjct: 230 RDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMY----SK 285
Query: 170 CG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM----PHRNVVSWTTM 224
C + AR +F+ + R V+SW +++ G + G + A ++D M N V++ +
Sbjct: 286 CSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGL 345
Query: 225 ISGCAQNGKSRQALSLFNEMR 245
I C+ G ++ LF M+
Sbjct: 346 IYACSHAGLVQKGRQLFESMK 366
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 8/201 (3%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H + GF + L+ Y +++A +VFE W M+ G A+
Sbjct: 259 QLHGSTMRLGFLSNMIVGNALIDMYSKCSDILSAREVFEGITFRDVISWTTMVVGEAQHG 318
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLAS-GYCSNVFIR 156
E+++ LY +M+ +P+E T+ L+ C+ GL ++G Q+ + G +
Sbjct: 319 RAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHY 378
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPAR-SVVSWNSLLKGYVKRGDIDGAWKIFD---E 212
T ++L SG A L MP +W +LL K D + +I D E
Sbjct: 379 TCYLDLLSRSGHLLE---AEELMTTMPYEPDEATWGALLSACTKYKDAEMCIRISDKLLE 435
Query: 213 MPHRNVVSWTTMISGCAQNGK 233
+ ++ ++ + + A NGK
Sbjct: 436 LRPKDSSTYILLSNVYAVNGK 456
>gi|15221713|ref|NP_174428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169458|sp|Q9C866.1|PPR65_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31430
gi|12322531|gb|AAG51260.1|AC027135_1 PPR-repeat protein [Arabidopsis thaliana]
gi|332193234|gb|AEE31355.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 570
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 172/486 (35%), Positives = 271/486 (55%), Gaps = 35/486 (7%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H + G +Y+ L+ Y + G + HKVF++ WN +I + +
Sbjct: 67 KVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNG 126
Query: 98 TPEKSVYLYKQMIDKET-EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
E ++ ++K+M + + DE T LS C+ GE+++ R + + + +V I
Sbjct: 127 RFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIY-RFVVTEFEMSVRIG 185
Query: 157 TNLMNLYLMSGGECGVGC---ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
L++++ C GC AR +FD M ++V W S++ GYV G ID A +F+
Sbjct: 186 NALVDMF------CKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERS 239
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK 273
P ++VV WT M++G Q + +AL LF M+ A + D LV+ L+ CA+ G L+ GK
Sbjct: 240 PVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGK 299
Query: 274 WIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF 333
WIH Y+ EN R V + AL+ MYA CG IE A VF +++ R+T SWTS+I G
Sbjct: 300 WIHGYINEN----RVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGL 355
Query: 334 AKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
A G + AL +TF+ VL+AC+HGGFV EGR+ F M + ++P+
Sbjct: 356 AMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPK 415
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDA---VLGSLLLGCRIHNNAELASQVAQ 435
EH C++DL RAGL+DEA L+ M + ++ V SLL R + N ++A +VA+
Sbjct: 416 SEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAE 475
Query: 436 KLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHD 495
KL +++ ++ + L+A+VYA+A RW+DV VR+KM +G+RK PG S ++I+GV H+
Sbjct: 476 KL-EKVEVSDSSAH-TLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHE 533
Query: 496 FVAGDS 501
F+ GD
Sbjct: 534 FIVGDD 539
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 143/310 (46%), Gaps = 50/310 (16%)
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE 138
+ PS ++N+M++ A ++ K + L+ ++ + PD +T +L R EGE
Sbjct: 7 QTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGE 66
Query: 139 QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYV 198
+VHG + +G + ++ +LM +Y G + +FD+MP R VVSWN L+ YV
Sbjct: 67 KVHGYAVKAGLEFDSYVSNSLMGMYASLG---KIEITHKVFDEMPQRDVVSWNGLISSYV 123
Query: 199 KRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVA 258
G + A +F M + + + D+ +V+
Sbjct: 124 GNGRFEDAIGVFKRMS------------------------------QESNLKFDEGTIVS 153
Query: 259 ALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM 318
LSAC+ + +L++G+ I+ +V F + V + NAL+ M+ CG +++A VF M
Sbjct: 154 TLSACSALKNLEIGERIYRFVVTEFEMS-----VRIGNALVDMFCKCGCLDKARAVFDSM 208
Query: 319 QRRNTVSWTSMITGFAKQGYAQEALLTFLG------VLSACSHGGFV-----DEGRQFFE 367
+ +N WTSM+ G+ G EA + F VL G+V DE + F
Sbjct: 209 RDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFR 268
Query: 368 CMNQNWGIKP 377
CM Q GI+P
Sbjct: 269 CM-QTAGIRP 277
>gi|296083752|emb|CBI23741.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 165/490 (33%), Positives = 276/490 (56%), Gaps = 28/490 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q HS+I+ G SQ + + KL+ Y + ++ VF+ ++ + +WN +I G+A++
Sbjct: 44 QSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGYAKNR 103
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++ L+ QM + PD++T S L V + G G+ +HG+ + G+ S+ +
Sbjct: 104 LYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSDTVVAN 163
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
++M++Y G +R +FD+M R+ SWN L+ GY G++ ++FD M RN
Sbjct: 164 SIMSMYCKCG---NFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNLVVGRRVFDRMKCRN 220
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRAR-VGLDQVALVAALSACAEIGDLKLGKWIH 276
V SWT MI+G +NG S +ALSLF +M+ + ++V+LV+ L AC+ L G+ IH
Sbjct: 221 VFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIH 280
Query: 277 SYVEENFSVGRE-PVLVSLNNALIHMYASCGEIEEAYGVFRKMQR-RNTVSWTSMITGFA 334
F+V +E VSL NALI MY+ CG ++ A VF ++ +SW+SMI+G+
Sbjct: 281 -----GFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYG 335
Query: 335 KQGYAQEALL---------------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
G QEA+L T +G+LSACS G V+EG + + ++GI+P +
Sbjct: 336 LHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTL 395
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
E + C+VD+ RAG +D A ++ MP++P +V G+L+ IH + E+ ++A + +
Sbjct: 396 EIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHGDLEM-QELAYRFLI 454
Query: 440 EIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG 499
+++PE + Y++ ++N+YA+++RW VA VR+ M +RK PG SW+ IN H F
Sbjct: 455 QLEPENPSNYVS-ISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSWISINNKTHCFYTL 513
Query: 500 DSTYKQASLI 509
+ +Q LI
Sbjct: 514 KYSLRQVCLI 523
>gi|22331393|ref|NP_189507.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273574|sp|Q9LJI9.1|PP260_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g28660
gi|9294280|dbj|BAB02182.1| unnamed protein product [Arabidopsis thaliana]
gi|20259531|gb|AAM13885.1| unknown protein [Arabidopsis thaliana]
gi|24030460|gb|AAN41382.1| unknown protein [Arabidopsis thaliana]
gi|332643950|gb|AEE77471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 170/520 (32%), Positives = 277/520 (53%), Gaps = 67/520 (12%)
Query: 31 NTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV----TSGYLINAHKVFEKTENPSTAIW 86
NT K + HS II+G + Y ++KLL ++ + + A +F+ E P++ ++
Sbjct: 22 NTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVY 81
Query: 87 NQMIRGHARSETPEKSVYLYKQMIDKETE---PDEYTYSFLLSVCARCGLFREGEQVHGR 143
+ MIR +RS P + + M+ +E E P T+ FL+ C + F G+Q+H
Sbjct: 82 DTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCW 141
Query: 144 VLASG-YCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGD 202
V+ +G + S+ ++T ++ +Y+ +LLFD
Sbjct: 142 VVKNGVFLSDGHVQTGVLRIYVED---------KLLFD---------------------- 170
Query: 203 IDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSA 262
A K+FDE+P +VV W +++G + G + L +F EM + D+ ++ AL+A
Sbjct: 171 ---ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTA 227
Query: 263 CAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRN 322
CA++G L GKWIH +V++ + + V + AL+ MYA CG IE A VF K+ RRN
Sbjct: 228 CAQVGALAQGKWIHEFVKKKRWIESD---VFVGTALVDMYAKCGCIETAVEVFEKLTRRN 284
Query: 323 TVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFF 366
SW ++I G+A GYA++A + LGVL+AC+HGGF++EGR
Sbjct: 285 VFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTML 344
Query: 367 ECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNN 426
E M +GI P+ EHY C+VDL RAG +D+A L++ MPMKP +V G+LL GCR H N
Sbjct: 345 ENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKN 404
Query: 427 AELASQVAQKLV----AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPP 482
EL Q L+ ++ E+AA L ++N+Y + +R + VR + + G+RK P
Sbjct: 405 VELGELAVQNLLDLEKGNVEEEEAA--LVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTP 462
Query: 483 GQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQ 522
G S ++++G++ FV+GD ++ I+ + +++ A Q
Sbjct: 463 GWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIHLLSVDASQ 502
>gi|297800868|ref|XP_002868318.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata]
gi|297314154|gb|EFH44577.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 151/441 (34%), Positives = 263/441 (59%), Gaps = 27/441 (6%)
Query: 116 PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV-GC 174
PD++ +S L+ CA G + G+QVH + S Y ++ ++++L+++Y +C + C
Sbjct: 40 PDDFVFSALVKACANLGSIKLGKQVHCHFIVSEYSNDDVVKSSLVDMY----AKCRLLDC 95
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
A+ +FD + ++ +SW +++ GY K G + A ++F +P +N+ SWT +ISG Q+GK
Sbjct: 96 AKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRRLPVKNLYSWTALISGFVQSGKG 155
Query: 235 RQALSLFNEMRRARVG-LDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVS 293
+A S+F EMRR RV LD + L + + ACA + G+ +H V ++G + V
Sbjct: 156 LEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLV---IALGFDSC-VF 211
Query: 294 LNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------- 343
++NALI MYA C ++ A +F +M+ R+ VSWTS+I G A+ G A++AL
Sbjct: 212 ISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDEMVSHG 271
Query: 344 -----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEA 398
+TF+G++ ACSH GFV +GR+ F+ M +++GI+P ++HY C++DL R+GL+DEA
Sbjct: 272 VKPNEVTFVGLIYACSHVGFVAKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEA 331
Query: 399 FSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYA 458
+L+ MP P++ +LL C+ ++ ++A LV+ P+ + Y+ L++N+YA
Sbjct: 332 ENLIHTMPFPPDEPTWAALLSACKRQGQGQMGVRIADHLVSSFKPKDPSTYI-LLSNIYA 390
Query: 459 AAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITM 518
+A W V+ R+K+ M VRK PG S V++ F AG++++ I++ L ++
Sbjct: 391 SASLWGKVSEARRKLGDMEVRKDPGYSSVEVRKETEVFYAGETSHALKEDIFRLLKKLEE 450
Query: 519 QA-MQEGYKPDISELFLGIEE 538
+ ++ GY PD S + ++E
Sbjct: 451 EMRIRNGYVPDTSWILHDMDE 471
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 145/365 (39%), Gaps = 81/365 (22%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H I++ +S + + + L+ Y L A VF+ +T W M+ G+A+S
Sbjct: 63 QVHCHFIVSEYSNDDVVKSSLVDMYAKCRLLDCAKAVFDSIRVKNTISWTAMVSGYAKSG 122
Query: 98 TPEKSVYLYKQMIDKE------------------------TEP--------DEYTYSFLL 125
E+++ L++++ K TE D S ++
Sbjct: 123 RKEEALELFRRLPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIV 182
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPA 184
CA G QVHG V+A G+ S VFI L+++Y +C V A+ +F M
Sbjct: 183 GACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMY----AKCSDVIAAKDIFSRMRH 238
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV----VSWTTMISGCAQNGKSRQALSL 240
R VVSW SL+ G + G + A ++DEM V V++ +I C+ G + L
Sbjct: 239 RDVVSWTSLIVGMAQHGQAEKALALYDEMVSHGVKPNEVTFVGLIYACSHVGFVAKGREL 298
Query: 241 FNEMRR------------------ARVGL---------------DQVALVAALSACAEIG 267
F M + R GL D+ A LSAC G
Sbjct: 299 FQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQG 358
Query: 268 DLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC---GEIEEAYGVFRKMQRRNTV 324
++G I ++ +F + L+N +YAS G++ EA M+ R
Sbjct: 359 QGQMGVRIADHLVSSFKPKDPSTYILLSN----IYASASLWGKVSEARRKLGDMEVRKDP 414
Query: 325 SWTSM 329
++S+
Sbjct: 415 GYSSV 419
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQAL-SLFNEMRRARVGLDQVALVAALSACAEIGDLKL 271
MPHR+ ++W ++++ Q S + L + + + D A + ACA +G +KL
Sbjct: 1 MPHRDHIAWASVLTALNQANLSGKTLWVFSSVGSSSGLRPDDFVFSALVKACANLGSIKL 60
Query: 272 GKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMIT 331
GK +H + F V + ++L+ MYA C ++ A VF ++ +NT+SWT+M++
Sbjct: 61 GKQVHCH----FIVSEYSNDDVVKSSLVDMYAKCRLLDCAKAVFDSIRVKNTISWTAMVS 116
Query: 332 GFAKQGYAQEALLTF 346
G+AK G +EAL F
Sbjct: 117 GYAKSGRKEEALELF 131
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 167/516 (32%), Positives = 274/516 (53%), Gaps = 56/516 (10%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+HS + FS+++ LL Y G L +A VF + + S + MI G+AR
Sbjct: 167 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 226
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
++V L+++M ++ PD YT + +L+ CAR L EG++VH + + ++F+
Sbjct: 227 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA 286
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
LM++Y K G + A +F EM +++
Sbjct: 287 LMDMY----------------------------------AKCGSMQEAELVFSEMRVKDI 312
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEM-RRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+SW T+I G ++N + +ALSLFN + R D+ + L ACA + G+ IH
Sbjct: 313 ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHG 372
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y+ N V N+L+ MYA CG + A+ +F + ++ VSWT MI G+ G
Sbjct: 373 YIMRNGYFSDRHVA----NSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHG 428
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+ +EA+ ++F+ +L ACSH G VDEG +FF M I+P +EHY
Sbjct: 429 FGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHY 488
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
C+VD+ +R G + +A+ ++NMP+ P+ + G+LL GCRIH++ +LA +VA+K V E++
Sbjct: 489 ACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEK-VFELE 547
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
PE GY L+AN+YA A++W+ V +R+++ + G+RK PG SW++I G ++ FVAGDS+
Sbjct: 548 PEN-TGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSS 606
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ I L ++ + ++EGY P + EE
Sbjct: 607 NPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEE 642
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 171/350 (48%), Gaps = 56/350 (16%)
Query: 75 FEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLF 134
F++ + WN ++ A+S S+ L+K+M+ E D YT+S + +
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 135 REGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLL 194
GEQ+HG +L SG+ G VG NSL+
Sbjct: 61 HGGEQLHGFILKSGF-----------------GERNSVG-----------------NSLV 86
Query: 195 KGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQV 254
Y+K +D A K+FDEM R+V+SW ++I+G NG + + LS+F +M + + +D
Sbjct: 87 AFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLA 146
Query: 255 ALVAALSACAEIGDLKLGKWIHSY-VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
+V+ + CA+ + LG+ +HS V+ FS RE N L+ MY+ CG+++ A
Sbjct: 147 TIVSVFAGCADSRLISLGRAVHSIGVKACFS--REDRFC---NTLLDMYSKCGDLDSAKA 201
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEA---------------LLTFLGVLSACSHGGF 358
VFR+M R+ VS+TSMI G+A++G A EA + T VL+ C+
Sbjct: 202 VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 261
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
+DEG++ E + +N + I ++D++++ G M EA + M +K
Sbjct: 262 LDEGKRVHEWIKEN-DLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK 310
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH I+ NG+ ++ L+ Y G L+ AH +F+ + W MI G+
Sbjct: 369 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHG 428
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
++++ L+ QM E DE ++ LL C+ GL EG
Sbjct: 429 FGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 468
>gi|356496056|ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 184/554 (33%), Positives = 292/554 (52%), Gaps = 63/554 (11%)
Query: 7 IPANPATSSK---ALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV 63
+P +P SS+ + SLL+ + + Q+H+ I+ G ++ + L+A
Sbjct: 15 LPNSPPQSSELNAKFNEQGWLSLLKRCKSMEEFKQVHAHILKLGLFYDSFCGSNLVASCA 74
Query: 64 TS--GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
S G + A +F + E P + +N MIRG+ S E+++ LY +M+++ EPD +TY
Sbjct: 75 LSRWGSMEYACSIFSQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTY 134
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFD 180
F+L C+ +EG Q+H V +G +VF++ L+++Y G+CG + A ++F+
Sbjct: 135 PFVLKACSLLVALKEGVQIHAHVFKAGLEVDVFVQNGLISMY----GKCGAIEHAGVVFE 190
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSL 240
M +SV SW+S++ GA H +V W + L L
Sbjct: 191 QMDEKSVASWSSII----------GA--------HASVEMW-------------HECLML 219
Query: 241 FNEMR-RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
+M R ++ LV+ALSAC +G LG+ IH + N S + V + +LI
Sbjct: 220 LGDMSGEGRHRAEESILVSALSACTHLGSPNLGRCIHGILLRNIS----ELNVVVKTSLI 275
Query: 300 HMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF------------- 346
MY CG +E+ VF+ M +N S+T MI G A G +EA+ F
Sbjct: 276 DMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREAVRVFSDMLEEGLTPDDV 335
Query: 347 --LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQN 404
+GVLSACSH G V+EG Q F M IKP I+HYGCMVDL RAG++ EA+ L+++
Sbjct: 336 VYVGVLSACSHAGLVNEGLQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKS 395
Query: 405 MPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQ 464
MP+KPND V SLL C++H+N E+ ++A + + ++ YL L AN+YA AK+W
Sbjct: 396 MPIKPNDVVWRSLLSACKVHHNLEIG-EIAAENIFRLNKHNPGDYLVL-ANMYARAKKWA 453
Query: 465 DVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEG 524
+VA +R +M + + + PG S V+ N ++ FV+ D + IY + ++ Q EG
Sbjct: 454 NVARIRTEMAEKHLVQTPGFSLVEANRNVYKFVSQDKSQPICETIYDMIQQMEWQLKFEG 513
Query: 525 YKPDISELFLGIEE 538
Y PD+S++ L ++E
Sbjct: 514 YTPDMSQVLLDVDE 527
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 177/497 (35%), Positives = 268/497 (53%), Gaps = 38/497 (7%)
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKET-EPDEYTYSFL 124
G + A +FE S WN MI G+ ++ K++ L+ +M+ + + PDE+T + +
Sbjct: 244 GRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSV 303
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDM-- 182
LS CA G R G+QVH +L + N + L++ Y SG V AR + D
Sbjct: 304 LSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGS---VENARRIMDQSME 360
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
+V+S+ +LL+GYVK GD++ A ++F M +R+VV+WT MI G QNG++ +A+ LF
Sbjct: 361 TDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFR 420
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIH-----SYVEENFSVGREPVLVSLNNA 297
M + L A LS CA + L GK IH S +E + SV +NA
Sbjct: 421 SMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSV---------SNA 471
Query: 298 LIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAKQGYAQEAL------------- 343
+I MYA G A +F ++ R+ T++WTSMI A+ G +EA+
Sbjct: 472 IITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEP 531
Query: 344 --LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
+T++GVLSACSH GFV+EG+++++ + I P + HY CMVDL +RAGL EA
Sbjct: 532 DRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEF 591
Query: 402 VQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAK 461
++ MP++P+ GSLL CR+H NAELA A+KL++ IDP + Y A +ANVY+A
Sbjct: 592 IRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLS-IDPNNSGAYSA-IANVYSACG 649
Query: 462 RWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAM 521
RW D A + + + VRK G SW I +H F A D + Q +Y + +
Sbjct: 650 RWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIK 709
Query: 522 QEGYKPDISELFLGIEE 538
G+ PD+ + +++
Sbjct: 710 GAGFVPDLQSVLHDVDD 726
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 198/435 (45%), Gaps = 52/435 (11%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
LL+ + SG L +A VF + W M+ G R+ +++ M P
Sbjct: 104 LLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPT 163
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCAR 176
++T + +LS CA G +VH V+ G S V + +++N+Y G+CG A
Sbjct: 164 QFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMY----GKCGDAETAS 219
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
+F+ MP RSV SWN+++ G +D A +F+ MP R++VSW MI+G QNG +
Sbjct: 220 TVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAK 279
Query: 237 ALSLFNEM-RRARVGLDQVALVAALSACAEIGDLKLGKWIHSY----------------- 278
AL LF+ M + + D+ + + LSACA +G++++GK +H+Y
Sbjct: 280 ALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALI 339
Query: 279 --------VEENFSVGREPVLVSLN----NALIHMYASCGEIEEAYGVFRKMQRRNTVSW 326
VE + + + LN AL+ Y G++E A +F M R+ V+W
Sbjct: 340 STYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAW 399
Query: 327 TSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQ 371
T+MI G+ + G EA+ T VLS C+ +D G+Q C
Sbjct: 400 TAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQ-IHCRAI 458
Query: 372 NWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELAS 431
++ ++ +++R+G A + + + S+++ H E A
Sbjct: 459 RSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAV 518
Query: 432 QVAQKLV-AEIDPEQ 445
+ ++++ A ++P++
Sbjct: 519 GLFEEMLRAGVEPDR 533
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 149/320 (46%), Gaps = 36/320 (11%)
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLY-LMSGGECGVGCARLLF 179
Y+ LL +C G +H R + +G ++ ++ NL++ Y +GG G+ AR LF
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 180 DDMP--ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
D++P R+V +WNSLL + K G + A +F EMP R+ VSWT M+ G + G+ +A
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
+ +M Q L LS+CA +G+ +HS+V + +G V + N+
Sbjct: 149 IKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVK-LGLGS---CVPVANS 204
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGG 357
+++MY CG+ E A VF +M R+ SW +M+ S +H G
Sbjct: 205 VLNMYGKCGDAETASTVFERMPVRSVSSWNAMV--------------------SLNTHLG 244
Query: 358 FVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM----PMKPNDAV 413
+D FE M I + M+ +++ GL +A L M M P++
Sbjct: 245 RMDLAESLFESMPGR-----SIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFT 299
Query: 414 LGSLLLGCRIHNNAELASQV 433
+ S+L C N + QV
Sbjct: 300 ITSVLSACANLGNVRIGKQV 319
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 133/296 (44%), Gaps = 39/296 (13%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
LL YV G + +A ++F N W MI G+ ++ ++++ L++ MI EP+
Sbjct: 371 LLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPN 430
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
YT + +LSVCA G+Q+H R + S
Sbjct: 431 SYTLAAVLSVCASLACLDYGKQIHCRAIRS------------------------------ 460
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN-VVSWTTMISGCAQNGKSRQ 236
+ RS N+++ Y + G A ++FD++ R ++WT+MI AQ+G+ +
Sbjct: 461 ----LLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEE 516
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
A+ LF EM RA V D++ V LSAC+ G + GK + ++ + E +S
Sbjct: 517 AVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPE---MSHYA 573
Query: 297 ALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQGYAQEALLTFLGVLS 351
++ + A G EA R+M + ++W S+++ A+ A L +LS
Sbjct: 574 CMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLS 629
>gi|297848882|ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
gi|297338164|gb|EFH68581.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
Length = 1329
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 176/550 (32%), Positives = 288/550 (52%), Gaps = 58/550 (10%)
Query: 31 NTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMI 90
+T K L + +I +Q Y++ + + + L A + + P+ ++N +I
Sbjct: 791 STPKLLESALAAMIKTSQTQNCYLMNQFITACSSFNRLDLAVSFMTQMQKPNVFVYNALI 850
Query: 91 RGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYC 150
+G P +S+ Y +M+ P YTYS L+ A F E Q H + G+
Sbjct: 851 KGFVTCSHPIRSLEFYVRMLRDSVSPSSYTYSSLVQASAFASGFGESLQAH--IWKFGFG 908
Query: 151 SNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSW-------------------- 190
+V I+T L+ Y SG + AR +FD+MP R V+W
Sbjct: 909 FHVQIQTTLIGFYSASGR---IREARKVFDEMPERDDVTWTTMVSAYRQVLDMDSANSLA 965
Query: 191 -----------NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
N L+ GY + G+++ A +F++MP ++++SWTTMI+G ++N + R+A++
Sbjct: 966 NQMPEKNEATWNCLIDGYTRLGNLELAESLFNQMPVKDIISWTTMINGYSRNKRYREAIA 1025
Query: 240 LFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
+F +M + D+V + +SACA +G L++GK +H Y +N V + V + +AL+
Sbjct: 1026 VFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTVQNGFV----LDVYIGSALV 1081
Query: 300 HMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------L 344
MY+ CG +E A VF + ++N W S+I G A G+AQEAL +
Sbjct: 1082 DMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNTV 1141
Query: 345 TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQN 404
TF+ V +AC+H G V+EGR+ + M ++ I +EHYGCMV LFS+AGL+ EA L+ +
Sbjct: 1142 TFVSVFTACTHAGLVEEGRRIYRSMIDDYSIVSNVEHYGCMVHLFSKAGLIYEALELIGS 1201
Query: 405 MPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQ 464
M +PN + G+LL GCRIH N E+A KL+ ++P +GY L+ ++YA RW+
Sbjct: 1202 MEFEPNAVIWGALLDGCRIHKNLEIAEIAFNKLMI-LEP-MNSGYYFLLVSMYAEQNRWR 1259
Query: 465 DVAAVRQKMIKMGVRK-PPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQE 523
DVA +R +M ++G+ K PG S ++I+ H F A D ++ + + L EI Q
Sbjct: 1260 DVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYEQMGLA 1319
Query: 524 GYKPDISELF 533
GY + ++
Sbjct: 1320 GYVQETENVY 1329
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 165/493 (33%), Positives = 273/493 (55%), Gaps = 28/493 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+H++I+ Y L+ Y G L +A +VF+ + W +I G A++
Sbjct: 267 HLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAG 326
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E+++ L+ QM + D++T + +L VC GEQ+H + G S+V +
Sbjct: 327 FQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVAN 386
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L+ +Y +CG V A F+ MP R ++SW +++ + + GD++ A + FD+MP R
Sbjct: 387 ALVTMY----AKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPER 442
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
NV+SW +M++ Q G + L ++ +M R V D + ++SACA++ L LG I
Sbjct: 443 NVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQIL 502
Query: 277 SYVEE-NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
+ E+ FS VS+ N+++ MY+ CG+IEEA +F + +N VSW +M+ G+A+
Sbjct: 503 AQAEKLGFSSN-----VSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQ 557
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
G ++ + ++++ VLS CSH GFV EG+ +F M ++ GI P E
Sbjct: 558 NGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSE 617
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
H+ CMVDL RAG +++A +L+ MP KPN A+ G+LL CRIH N +LA ++A K + E
Sbjct: 618 HFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGNTKLA-ELAVKNLLE 676
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
+D E Y L+AN+Y+ + + Q V VR+ M GVRK PG SW++++ +H F D
Sbjct: 677 LDAEGPGSY-CLLANIYSESGKIQGVTNVRKLMRDKGVRKNPGCSWIEVDNRVHVFTVDD 735
Query: 501 STYKQASLIYKTL 513
+ + Q +++ L
Sbjct: 736 TNHPQIKDVHRML 748
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 162/328 (49%), Gaps = 36/328 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H+Q+I G ++ LL Y G + +A++VF P+ WN MI G A S
Sbjct: 25 KLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSWNTMISGFADSG 84
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE------------------Q 139
++ L+++M E D +++ ++S G F GE Q
Sbjct: 85 QMREAEKLFEKM----PERDSVSWNSMMS-----GYFHNGELEATIKASGSLGYLKLALQ 135
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVK 199
+HG + + + T+++++Y+ G + A+ +F P S+ WNS++ GY K
Sbjct: 136 LHGFAEKFDFGIDTCVETSVLDMYIKCGA---MDFAQKVFCRTPNPSLFCWNSMIYGYSK 192
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
G + A ++F +MP R+ VSW TMIS +Q+G + L+ F EM + + +
Sbjct: 193 YGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASV 252
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVL-VSLNNALIHMYASCGEIEEAYGVFRKM 318
LSAC I DL+ G +H+ + V EP L V LI MYA CG +E A VF +
Sbjct: 253 LSACTSIYDLEWGAHLHARI-----VRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGL 307
Query: 319 QRRNTVSWTSMITGFAKQGYAQEALLTF 346
N VSWTS+I G A+ G+ +EAL+ F
Sbjct: 308 TEHNAVSWTSLIGGVAQAGFQEEALVLF 335
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 178/448 (39%), Gaps = 124/448 (27%)
Query: 45 INGFSQK------NYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
++GF++K + +L Y+ G + A KVF +T NPS WN MI G+++ +
Sbjct: 136 LHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGS 195
Query: 99 PEKSVYLYKQMIDKET-------------------------------EPDEYTYSFLLSV 127
+K++ L+ +M +++T P+ TY+ +LS
Sbjct: 196 VKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSA 255
Query: 128 CARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARS 186
C G +H R++ C +V+ L+++Y +CG + AR +FD + +
Sbjct: 256 CTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMY----AKCGRLESARQVFDGLTEHN 311
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
VSW SL I G AQ G +AL LFN+MR
Sbjct: 312 AVSWTSL-------------------------------IGGVAQAGFQEEALVLFNQMRE 340
Query: 247 ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC- 305
V DQ L L C D+ +G+ +H++ PV NAL+ MYA C
Sbjct: 341 VPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVA----NALVTMYAKCG 396
Query: 306 ------------------------------GEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
G++E+A F KM RN +SW SM+ + +
Sbjct: 397 DVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQ 456
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
+GY +E L +TF +SAC+ + G Q + G +
Sbjct: 457 RGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQIL-AQAEKLGFSSNVS 515
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
+V ++SR G ++EA + ++ MK
Sbjct: 516 VANSVVTMYSRCGQIEEAQKMFSSIVMK 543
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 143/295 (48%), Gaps = 32/295 (10%)
Query: 128 CARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARS 186
CA ++H +++ G S++F++ +L+N+Y CG + A +F + +
Sbjct: 14 CASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMY----SNCGLISDAYRVFGGIMFPN 69
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
V SWN+++ G+ G + A K+F++MP R+ VSW +M+SG NG+ + +
Sbjct: 70 VYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLGY 129
Query: 247 ARVGLDQVALVA----ALSACAEIG--DLKLGKWIHSYVEENFSVGREPVLVSLNNALIH 300
++ L + C E D+ + + ++ F P L N ++I+
Sbjct: 130 LKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWN-SMIY 188
Query: 301 MYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFL------------- 347
Y+ G +++A +F KM R+TVSW +MI+ ++ G+ E L TFL
Sbjct: 189 GYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMT 248
Query: 348 --GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY-GC-MVDLFSRAGLMDEA 398
VLSAC+ ++ G + + ++P ++ Y GC ++D++++ G ++ A
Sbjct: 249 YASVLSACTSIYDLEWGAHLHARIVR---MEPCLDVYAGCGLIDMYAKCGRLESA 300
>gi|108864632|gb|ABG22571.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 170/517 (32%), Positives = 280/517 (54%), Gaps = 26/517 (5%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H++I+ G + A L++ Y S L +A +F++T I++ ++ + S +
Sbjct: 107 MHARILKEGLAHHPPNPAALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSAS 166
Query: 99 PEKSVYLYKQMIDKET-EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
PE ++ + + M+ + PD + S + SV AR R G Q+H + S Y + +++
Sbjct: 167 PELALPILRCMLSADALHPDHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVKS 226
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
+L+++Y G R +FD M A++ V W +L+ GY G + A ++F MP RN
Sbjct: 227 SLVDMYCKCGSPDD---GRKVFDSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRN 283
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQV-ALVAALSACAEIGDLKLGKWIH 276
+ +WT +ISG G+S A+ LF EMRR V +D L + A++ LG+ +H
Sbjct: 284 LFAWTALISGLVNTGESVGAVELFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLH 343
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+G ++ + NALI MY+ C +I A VF + R+ +SWT+M+ G A+
Sbjct: 344 G---STMRLGFLSNMI-VGNALIDMYSKCSDILSAREVFEGITFRDVISWTTMVVGEAQH 399
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G A+EAL +TF+G++ ACSH G V +GRQ FE M +GI PR++H
Sbjct: 400 GRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQH 459
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
Y C +DL SR+G + EA L+ MP +P++A G+LL C + +AE+ +++ KL+ E+
Sbjct: 460 YTCYLDLLSRSGHLLEAEELMTTMPYEPDEATWGALLSACTKYKDAEMCIRISDKLL-EL 518
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
P+ ++ Y+ L++NVYA +W VA VR+ MI + +RK PG SW++ F AG+
Sbjct: 519 RPKDSSTYI-LLSNVYAVNGKWDSVAKVRKCMIGLEIRKEPGYSWIEAGREFRLFHAGEV 577
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
I L E+ ++ + GY PD S + +EE
Sbjct: 578 PLDVREEIMVFLEEMVLEMRKRGYVPDTSSVMHDLEE 614
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 112/261 (42%), Gaps = 44/261 (16%)
Query: 22 QIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENP 81
+F+ L+ R + Q+H+ +++ ++ + + + L+ Y G + KVF+
Sbjct: 195 SVFARLRSRRLGR---QLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAK 251
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMI------------------------------- 110
++ +W ++ G+A + E+++ L++ M
Sbjct: 252 NSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMR 311
Query: 111 -DKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGE 169
D D + S ++ A F G Q+HG + G+ SN+ + L+++Y +
Sbjct: 312 RDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMY----SK 367
Query: 170 CG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM----PHRNVVSWTTM 224
C + AR +F+ + R V+SW +++ G + G + A ++D M N V++ +
Sbjct: 368 CSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGL 427
Query: 225 ISGCAQNGKSRQALSLFNEMR 245
I C+ G ++ LF M+
Sbjct: 428 IYACSHAGLVQKGRQLFESMK 448
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 8/201 (3%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H + GF + L+ Y +++A +VFE W M+ G A+
Sbjct: 341 QLHGSTMRLGFLSNMIVGNALIDMYSKCSDILSAREVFEGITFRDVISWTTMVVGEAQHG 400
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLAS-GYCSNVFIR 156
E+++ LY +M+ +P+E T+ L+ C+ GL ++G Q+ + G +
Sbjct: 401 RAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHY 460
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPAR-SVVSWNSLLKGYVKRGDIDGAWKIFD---E 212
T ++L SG A L MP +W +LL K D + +I D E
Sbjct: 461 TCYLDLLSRSGHLLE---AEELMTTMPYEPDEATWGALLSACTKYKDAEMCIRISDKLLE 517
Query: 213 MPHRNVVSWTTMISGCAQNGK 233
+ ++ ++ + + A NGK
Sbjct: 518 LRPKDSSTYILLSNVYAVNGK 538
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 158/516 (30%), Positives = 276/516 (53%), Gaps = 55/516 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H+ + G +++ L+ Y G + A +F + A WN M+ G S+
Sbjct: 420 QVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSD 479
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ L+ M ++ + D+ T++ ++G+Q+H V+ + ++F+ +
Sbjct: 480 NYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVIS 539
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
++++YL K G++ A K+F+++P +
Sbjct: 540 GILDMYL----------------------------------KCGEMKSARKVFNQIPSPD 565
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
V+WTT+ISGC +NG+ QAL +++MR A V D+ + AC+ + L+ GK IH+
Sbjct: 566 DVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHA 625
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
+ + + +P +++ +L+ MYA CG IE+AYG+FR+M R+ W +MI G A+ G
Sbjct: 626 NIMK-LNCAFDPFVMT---SLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHG 681
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
A+EAL +TF+GVLSACSH G + + F+ M + +G++P IEHY
Sbjct: 682 NAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHY 741
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
C+VD SRAG + EA +V +MP + + + +LL CR+ + E +VA+KL +D
Sbjct: 742 SCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFT-MD 800
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P +A Y+ L++N+YAAA +W++ + R M ++ V+K PG SW+ + +H FVAGD +
Sbjct: 801 PSDSAAYV-LLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRS 859
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+++ LIY + + + +EGY PD + IEE
Sbjct: 860 HEETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEE 895
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 183/438 (41%), Gaps = 83/438 (18%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKT--ENPSTAIWNQMIRGHAR 95
+ H+ I+ +G + Y+ L+ Y G L +A K+F+ T + +N ++ +A
Sbjct: 34 RTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAH 93
Query: 96 S------ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGY 149
+ E ++ ++++ + +T S L +C G E + G + G
Sbjct: 94 TGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGL 153
Query: 150 CSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKI 209
+VF+ L+N+Y + AR+LFD MP R VV WN ++K YV+ G D +
Sbjct: 154 QWDVFVAGALVNIYAKFQR---IREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGL 210
Query: 210 FDEMPHR--------------------------------------------NVVSWTTMI 225
F HR +V W +
Sbjct: 211 FSAF-HRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTL 269
Query: 226 SGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSV 285
S Q G+ +A+ F +M ++RV D + + LS A + L+LGK IH V
Sbjct: 270 SSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAV---VRF 326
Query: 286 GREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLT 345
G + VS+ N+ I+MY G + A +F +M+ + +SW ++I+G A+ G + +L
Sbjct: 327 GWDQ-FVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRL 385
Query: 346 FL---------------GVLSACSHGGFVDE----GRQFFECMNQNWGIKPRIEHYGCMV 386
F+ VL ACS ++E GRQ C + GI ++
Sbjct: 386 FIDLLRSGLLPDQFTITSVLRACSS---LEESYCVGRQVHTCALKA-GIVLDSFVSTALI 441
Query: 387 DLFSRAGLMDEAFSLVQN 404
D++S+ G M+EA L N
Sbjct: 442 DVYSKGGKMEEAELLFHN 459
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 161/381 (42%), Gaps = 84/381 (22%)
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
A K+F ++ +WN+ + + ++ ++V ++ MI D TY +LSV A
Sbjct: 250 ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVAS 309
Query: 131 CGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSW 190
G+Q+HG V+ G+ V + + +N+Y
Sbjct: 310 LNHLELGKQIHGAVVRFGWDQFVSVANSAINMY--------------------------- 342
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG 250
VK G ++ A ++F +M +++SW T+ISGCA++G +L LF ++ R+ +
Sbjct: 343 -------VKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLL 395
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL----------NNALIH 300
DQ + + L AC S +EE++ VGR+ +L + ALI
Sbjct: 396 PDQFTITSVLRAC-------------SSLEESYCVGRQVHTCALKAGIVLDSFVSTALID 442
Query: 301 MYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LT 345
+Y+ G++EEA +F + SW +M+ GF +EAL +T
Sbjct: 443 VYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQIT 502
Query: 346 FLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMV-----DLFSRAGLMDEAFS 400
F A + +G+Q + IK R HY V D++ + G M A
Sbjct: 503 FANAAKAAGCLVRLQQGKQIHAVV-----IKMRF-HYDLFVISGILDMYLKCGEMKSARK 556
Query: 401 LVQNMPMKPNDAVLGSLLLGC 421
+ +P P+D +++ GC
Sbjct: 557 VFNQIP-SPDDVAWTTVISGC 576
>gi|125555946|gb|EAZ01552.1| hypothetical protein OsI_23585 [Oryza sativa Indica Group]
Length = 530
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 166/473 (35%), Positives = 258/473 (54%), Gaps = 36/473 (7%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
H+ I GF Y + L+ Y G + A KVF++ + + +WN M+R + R
Sbjct: 72 HAAAIKTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRCGRY 131
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVF----- 154
+V L +QM PD T ++ C+R G ++H Y NVF
Sbjct: 132 SAAVALSEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHV------YMDNVFGFNLP 185
Query: 155 IRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP 214
+ L+++Y + +C + A LF+ MPAR+++SW L+ GY G +D A +F++
Sbjct: 186 VANALLDMY--TKNDC-LEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCK 242
Query: 215 HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKW 274
++++ WT MI+ C Q+G +AL+LF +M+ RV D+ +V L+ CA +G L G+W
Sbjct: 243 EKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGALDQGEW 302
Query: 275 IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
IH Y E+ + + L ALI MY+ CG IE++ VF +MQ R+ +WT++I G A
Sbjct: 303 IHQYAEQR----KMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLA 358
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
G A AL +TF+GVLSAC HGG VDEGR+ F M + + I+PR+
Sbjct: 359 TNGQAGRALELFQDMQRSKVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIEPRV 418
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPM-KPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
EHY C+V+L RAGL+DEA L+ ++P+ K + G+LL C+ H N E++ ++ +++
Sbjct: 419 EHYSCLVNLLGRAGLLDEAERLIGDVPINKDAMPLFGALLTACKAHGNVEMSERLTKRIC 478
Query: 439 AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQING 491
+ Q L++NVYA A RW+DV VR KM V+K G S +++ G
Sbjct: 479 EQ--DSQITDVNLLMSNVYATASRWEDVIRVRGKMAHPTVKKTAGCSLIEVKG 529
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 159/346 (45%), Gaps = 53/346 (15%)
Query: 87 NQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLA 146
N +IR AR + + + +Y + + D +TY F+L L EG + H +
Sbjct: 18 NVLIRTLARRGSFARVMAVYYDLRARGLVADSFTYPFVLRAVGVLKLSVEGRKAHAAAIK 77
Query: 147 SGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGA 206
+G+ + + ++LM +Y M G V AR +FD+MP+R++V WN +++ Y++
Sbjct: 78 TGFRWDAYTGSSLMEMYTMLG---RVDIARKVFDEMPSRALVLWNMMVRCYIR------- 127
Query: 207 WKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEI 266
G+ A++L +M R+ V D+V LV A++AC+
Sbjct: 128 ------------------------CGRYSAAVALSEQMERSGVTPDRVTLVTAVTACSRA 163
Query: 267 GDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSW 326
DL LG+ IH Y++ F + + NAL+ MY +EEA +F +M RN +SW
Sbjct: 164 RDLSLGRRIHVYMDNVFGFN-----LPVANALLDMYTKNDCLEEAVKLFEQMPARNIISW 218
Query: 327 TSMITGFAKQGYAQEA-----------LLTFLGVLSACSHGGFVDEGRQFFECMNQNWGI 375
T +++G+ G +A L+ + +++AC G +E F M Q +
Sbjct: 219 TILVSGYGLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDM-QMQRV 277
Query: 376 KPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPN--DAVLGSLLL 419
+P ++ + G +D+ + Q + DAVLG+ L+
Sbjct: 278 EPDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKMKIDAVLGTALI 323
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 186/550 (33%), Positives = 281/550 (51%), Gaps = 59/550 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGH---- 93
++HS ++ G + LL Y +G L A VF++ + +T+ WN MI H
Sbjct: 128 KVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCG 187
Query: 94 ------ARSET-PEKSVYLYKQMI---------------------DKETEPDEYTYSFLL 125
A+ E E+ + + MI D +PD ++ + L
Sbjct: 188 RVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASAL 247
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDD--MP 183
S CA G+Q+HG ++ + + ++ + L+++Y SGG V AR + + +
Sbjct: 248 SACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGG---VEIARRIIEQSGIS 304
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
V+++ +LL GYVK GDI A +IF+ + +VV+WT MI G QNG + A+ +F
Sbjct: 305 DLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKT 364
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
M + L A LSA + + L GK IH+ + E + S+ NAL MYA
Sbjct: 365 MVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRS----GEALSPSVGNALTTMYA 420
Query: 304 SCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAKQGYAQEAL---------------LTFL 347
G I A VF + Q R+TVSWTSMI A+ G +EA+ +T++
Sbjct: 421 KAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYV 480
Query: 348 GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM 407
GVLSAC+HGG V++GR +F+ M I P + HY CMVDLF RAGL+ EA+ V+NMPM
Sbjct: 481 GVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPM 540
Query: 408 KPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVA 467
+P+ GSLL C+++ N +LA A++L+ I+P + Y AL ANVY++ +W D A
Sbjct: 541 EPDVIAWGSLLSSCKVYKNVDLAKVAAERLLL-IEPNNSGAYSAL-ANVYSSCGKWDDAA 598
Query: 468 AVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
+R+ M GV+K G SWVQI H F D + Q IYK + +I + + G+ P
Sbjct: 599 KIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAP 658
Query: 528 DISELFLGIE 537
D + +E
Sbjct: 659 DTESVLHDLE 668
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/464 (24%), Positives = 207/464 (44%), Gaps = 61/464 (13%)
Query: 34 KTLFQIHSQIIINGFSQKN-YILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRG 92
KT F + + + N K + +L+ Y G L AH+VF+ + W +I G
Sbjct: 22 KTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVG 81
Query: 93 HARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSN 152
+ + E ++ ++ M+ + P ++T + +L+ CA G G++VH V+ G +
Sbjct: 82 YNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHAC 141
Query: 153 VFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDE 212
V + +L+N+Y +G + A+++FD M R+ SWN+++ ++ G +D A F+
Sbjct: 142 VPVANSLLNMYAKTG---DLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFEL 198
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNE-MRRARVGLDQVALVAALSACAEIGDLKL 271
+ R++VSW +MI+GC Q+G +AL F+ ++ + D+ +L +ALSACA + L
Sbjct: 199 LSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSF 258
Query: 272 GKWIHSYVEENFSVGREPVLVSLNNALIHMYASC-------------------------- 305
GK IH Y+ V NALI MYA
Sbjct: 259 GKQIHGYIVRTMFDASGAV----GNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTAL 314
Query: 306 -------GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------------- 343
G+I A +F ++ + V+WT+MI G+ + G +A+
Sbjct: 315 LNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNS 374
Query: 344 LTFLGVLSACSHGGFVDEGRQFF-ECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
T +LSA S ++ G+Q + + P + + + ++++AG ++ A +
Sbjct: 375 FTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGN--ALTTMYAKAGSINGARKVF 432
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQV-AQKLVAEIDPEQ 445
+ + S+++ H E A ++ Q L I P+
Sbjct: 433 NLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDH 476
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 135/241 (56%), Gaps = 18/241 (7%)
Query: 148 GYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAW 207
G +V++ NLMNLY +G A LF++MP ++ SWN++L GY K+G ++ A
Sbjct: 5 GLTFSVYLMNNLMNLYAKTGFHLD---AHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAH 61
Query: 208 KIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIG 267
++FD +P R+ VSWTT+I G Q G+ A+ +F +M + +V Q L L++CA G
Sbjct: 62 QVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATG 121
Query: 268 DLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
+GK +HS+V +G V + N+L++MYA G+++ A VF +M+ RNT SW
Sbjct: 122 SRGIGKKVHSFV---VKLGLHAC-VPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWN 177
Query: 328 SMIT-----GFAKQGYAQEALLTFLGVLS------ACSHGGFVDEGRQFFECMNQNWGIK 376
+MI+ G AQ LL+ ++S C+ GF +E QFF + ++ +K
Sbjct: 178 AMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLK 237
Query: 377 P 377
P
Sbjct: 238 P 238
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 168/532 (31%), Positives = 276/532 (51%), Gaps = 59/532 (11%)
Query: 17 ALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV---TSGYLINAHK 73
+ T+ L+ N+ + L QI + I + +++ AKL+ F T + A
Sbjct: 26 TVNTQNPILLISKCNSLRELMQIQAYAIKSHIEDVSFV-AKLINFCTESPTESSMSYARH 84
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGL 133
+FE P I+N M RG++R P + L+ ++++ PD YT+ LL CA
Sbjct: 85 LFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKA 144
Query: 134 FREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSL 193
EG Q+H + G NV++ L+N+Y EC
Sbjct: 145 LEEGRQLHCLSMKLGLDDNVYVCPTLINMY----TECE---------------------- 178
Query: 194 LKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQ 253
D+D A +FD + VV + MI+G A+ + +ALSLF EM+ + ++
Sbjct: 179 --------DVDSARXVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNE 230
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
+ L++ LS+CA +G L LGKWIH Y +++ V +N ALI M+A CG +++A
Sbjct: 231 ITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCK----YVKVNTALIDMFAKCGSLDDAVS 286
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEALL---------------TFLGVLSACSHGGF 358
+F KM+ ++T +W++MI +A G A++++L TFLG+L+ACSH G
Sbjct: 287 IFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGR 346
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLL 418
V+EGR++F M +GI P I+HYG MVDL S AG +++A+ + +P+ P + LL
Sbjct: 347 VEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYEFIDKLPISPTPMLWRILL 406
Query: 419 LGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
C HNN +LA +V++++ E+D Y+ L +N+YA K+W+ V ++R+ M
Sbjct: 407 AACSSHNNLDLAEKVSERIF-ELDDSHGGDYVIL-SNLYARNKKWEYVDSLRKVMKDRKA 464
Query: 479 RKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
K PG S +++N V+H+F +GD + +++ L E+ + GY PD S
Sbjct: 465 VKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTS 516
>gi|147834049|emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
Length = 751
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 186/586 (31%), Positives = 294/586 (50%), Gaps = 100/586 (17%)
Query: 21 RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA----------FYVTSGYLIN 70
R+ SLLQ T L QIH+ ++ N + K +A Y +++
Sbjct: 153 RKCLSLLQQSKTRANLLQIHAFMLRNALETNPNLFTKFIATCSSIALLAPLYDPLAGIVH 212
Query: 71 AHKVFEKTENPSTA-IWNQMIRGHARSETPEKSVYLYKQMIDKET-EPDEYTYSFLLSVC 128
A ++F+ + A + N MI+ + +S LY+ + + PD +T+S L C
Sbjct: 213 ARRMFDHRPHRDDAFLCNSMIKAYVGMRQYSESFALYRDLRRNTSFTPDSFTFSVLAKSC 272
Query: 129 ARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVV 188
A EG+++H V+A G+C +++ T L+++Y G + CAR LFD+M RS V
Sbjct: 273 ALNMAIWEGQEIHSHVVAVGFCLDLYAATALVDMYAKFGK---MDCARKLFDEMIDRSQV 329
Query: 189 SWNSLLKGYVKRGDID-------------------------------GAWKIFDEMPHRN 217
SW +L+ GYV+ GD+D A K+FDEMP R+
Sbjct: 330 SWTALIGGYVRSGDMDNAGKLFDQMIEKDSAAFNTMIDAYVKLGDMCSARKLFDEMPERS 389
Query: 218 VVSWT-------------------------------TMISGCAQNGKSRQALSLFNEMRR 246
VVSWT MISG QN + +AL LF+EM+
Sbjct: 390 VVSWTIMIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYXQNKQPYEALKLFHEMQS 449
Query: 247 -ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC 305
+ D+V +V+ L A A++G L LG W+H +V + ++ ALI MYA C
Sbjct: 450 TTSLEPDEVTIVSVLPAIADLGALDLGGWVHRFVRRK----KLDRATNVGTALIDMYAKC 505
Query: 306 GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVL 350
GEI ++ GVF M + T SW ++I FA G A+EAL +T +GVL
Sbjct: 506 GEIVKSRGVFDNMPEKETASWNALINAFAINGRAKEALGLFMEMNHKGFMPNEITMIGVL 565
Query: 351 SACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPN 410
SAC+H G V+EG+++F+ M + +G+ P+IEHYGCMVDL RAG + EA L+++MP + N
Sbjct: 566 SACNHSGLVEEGKRWFKAM-EEFGLTPKIEHYGCMVDLLGRAGCLQEAEKLMESMPYEAN 624
Query: 411 DAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVR 470
+L S L C + A +V ++ + +++ Y+ ++ N+YA KRW++ V+
Sbjct: 625 GIILSSFLFACGYSKDVARAERVLKEAI-KMEAWNDGNYI-MLRNLYANEKRWKEADEVK 682
Query: 471 QKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEI 516
M + GV+K G S ++++ + +FVAGD + + I+ LG++
Sbjct: 683 GLMRRNGVKKEAGCSAIEVDSRVWEFVAGDRVHPKWEAIHSVLGQL 728
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 183/552 (33%), Positives = 279/552 (50%), Gaps = 61/552 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++HS ++ G S + LL Y G + A VF++ T+ WN MI H +
Sbjct: 166 KVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFC 225
Query: 98 TPEKSVYLYKQMIDKET--------------------------------EPDEYTYSFLL 125
+ ++ L+ QM D + +PD++T +L
Sbjct: 226 QFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVL 285
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPAR 185
S CA + G+Q+H ++ + + L+++Y SG V + P+
Sbjct: 286 SACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGA-VEVAHRIVEITGTPSL 344
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
+V+++ SLL GY K GDID A IFD + HR+VV+WT MI G AQNG AL LF M
Sbjct: 345 NVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMI 404
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSY---VEENFSVGREPVLVSLNNALIHMY 302
R + L A LS + + L GK +H+ +EE SV S+ NALI MY
Sbjct: 405 REGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSV-------SVGNALITMY 457
Query: 303 ASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAKQGYAQEAL---------------LTF 346
+ G I++A +F + R+T++WTSMI A+ G EA+ +T+
Sbjct: 458 SRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITY 517
Query: 347 LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP 406
+GVLSAC+H G V++G+ +F M I+P HY CM+DL RAGL++EA++ ++NMP
Sbjct: 518 VGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMP 577
Query: 407 MKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDV 466
++P+ GSLL CR+H +LA A+KL+ IDP + YLAL AN +A +W+D
Sbjct: 578 IEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLL-IDPNNSGAYLAL-ANTLSACGKWEDA 635
Query: 467 AAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYK 526
A VR+ M V+K G SWVQI +H F D+ + Q IY + +I + + G+
Sbjct: 636 AKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCMISKIWKEIKKMGFI 695
Query: 527 PDISELFLGIEE 538
PD + + +E+
Sbjct: 696 PDTNSVLHDLEQ 707
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 200/437 (45%), Gaps = 71/437 (16%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
+L+ + +G L +A +VF++ P + W MI G+ + +V+ + +M+ P
Sbjct: 85 ILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPT 144
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGC-AR 176
++T++ +L+ CA G++VH V+ G V + +L+N+Y +CG A+
Sbjct: 145 QFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMY----AKCGDSVMAK 200
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
++FD M + +WN+++ +++ D A +FD+M ++VSW ++I+G G +
Sbjct: 201 VVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIR 260
Query: 237 ALSLFNEM-RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
AL F+ M + + + D+ L + LSACA LKLGK IH+++ + ++
Sbjct: 261 ALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVR----ADVDIAGAVG 316
Query: 296 NALIHMYASCGEIEEAY---------------------------------GVFRKMQRRN 322
NALI MYA G +E A+ +F ++ R+
Sbjct: 317 NALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRD 376
Query: 323 TVSWTSMITGFAKQGYAQEALL---------------TFLGVLSACSHGGFVDEGRQFFE 367
V+WT+MI G+A+ G +AL+ T VLS S +D G+Q
Sbjct: 377 VVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLH- 435
Query: 368 CMNQNWGIKPRIEHYG------CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGC 421
+ R+E ++ ++SR+G + +A + ++ + S++L
Sbjct: 436 ------AVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSL 489
Query: 422 RIHNNAELASQVAQKLV 438
H A ++ +K++
Sbjct: 490 AQHGLGNEAIELFEKML 506
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 154/318 (48%), Gaps = 38/318 (11%)
Query: 137 GEQVHGRVLASGY-CSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLK 195
G +H R++ G VF+ NL+NLY+ +G A LFD+MP ++ SWN++L
Sbjct: 31 GRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSD---AHRLFDEMPLKTTFSWNTILS 87
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVA 255
+ K G++D A ++FDE+P + VSWTTMI G G + A+ F M + + Q
Sbjct: 88 AHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFT 147
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
L++CA L +GK +HS+V + G PV N+L++MYA CG+ A VF
Sbjct: 148 FTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPV----ANSLLNMYAKCGDSVMAKVVF 203
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGI 375
+M+ ++T +W +MI+ + + Q D F+ M
Sbjct: 204 DRMRLKDTSTWNTMISMHMQ--FCQ------------------FDLALALFDQMTD---- 239
Query: 376 KPRIEHYGCMVDLFSRAGL---MDEAFS-LVQNMPMKPNDAVLGSLLLGCRIHNNAELAS 431
P I + ++ + G E FS ++++ +KP+ LGS+L C + +L
Sbjct: 240 -PDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGK 298
Query: 432 QVAQKLV-AEIDPEQAAG 448
Q+ +V A++D A G
Sbjct: 299 QIHAHIVRADVDIAGAVG 316
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 167/504 (33%), Positives = 262/504 (51%), Gaps = 55/504 (10%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H+Q + G + L+ Y T G + A +VF+ + W MI G+A +
Sbjct: 281 VHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGN 340
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
E + L+ M ++ +PD TY +++ CA ++H +V +G+ +++ + T
Sbjct: 341 IEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTA 400
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
L+++Y K G I A ++FD MP R+V
Sbjct: 401 LVHMY----------------------------------AKCGAIKDARQVFDAMPRRDV 426
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
VSW+ MI +NG +A F+ M+R+ + D V + L+AC +G L +G I++
Sbjct: 427 VSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQ 486
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ V P L NALI M A G +E A +F M RR+ ++W +MI G++ G
Sbjct: 487 AIKADLVSHVP----LGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGN 542
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
A+EAL +TF+GVLSACS GFVDEGR+FF + + GI P ++ YG
Sbjct: 543 AREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYG 602
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
CMVDL RAG +DEA L+++MP+KP ++ SLL+ CRIH N ++A + A++ + IDP
Sbjct: 603 CMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLM-IDP 661
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
A Y+ L +++YAAA W++VA VR+ M G+RK G +W+++ G +H FV D ++
Sbjct: 662 YDGAVYVQL-SHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSH 720
Query: 504 KQASLIYKTLGEITMQAMQEGYKP 527
IY L + +EGY P
Sbjct: 721 PLVGEIYAELARLMNAIKREGYIP 744
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 187/405 (46%), Gaps = 60/405 (14%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+ II G Y L L+ Y G + A ++F+ EN + WN +I G+A+
Sbjct: 78 QVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVG 137
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ L++QM+D+ EP T+ +L C+ G++VH +V+ +G+ S+ I T
Sbjct: 138 HVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGT 197
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y+ G + AR +FD + R V ++N ++ GY K GD + A+++F
Sbjct: 198 ALVSMYVKGG---SMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELF------- 247
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL--DQVALVAALSACAEIGDLKLGKWI 275
R +VGL ++++ ++ L C L GK +
Sbjct: 248 --------------------------YRMQQVGLKPNKISFLSILDGCWTPEALAWGKAV 281
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
H+ V + + +LI MY +CG IE A VF M+ R+ VSWT MI G+A+
Sbjct: 282 HAQCMNAGLVDD----IRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAE 337
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
G ++A +T++ +++AC+ ++ R+ ++ G +
Sbjct: 338 NGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIA-GFGTDLL 396
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHN 425
+V ++++ G + +A + MP + D V S ++G + N
Sbjct: 397 VSTALVHMYAKCGAIKDARQVFDAMPRR--DVVSWSAMIGAYVEN 439
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 128/313 (40%), Gaps = 66/313 (21%)
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCAR 176
D TY L C G+QV ++ G N++ L+ LY + G V AR
Sbjct: 56 DSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICG---NVTEAR 112
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
+FD + ++VV+WN+L+ GY AQ G ++
Sbjct: 113 QIFDSVENKTVVTWNALIAGY-------------------------------AQVGHVKE 141
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV-----EENFSVGREPVL 291
A +LF +M + + ++ L AC+ L GK +H+ V +F +G
Sbjct: 142 AFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIG----- 196
Query: 292 VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------- 343
AL+ MY G +++A VF + R+ ++ M+ G+AK G ++A
Sbjct: 197 ----TALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQ 252
Query: 344 -------LTFLGVLSACSHGGFVDEGRQFF-ECMNQNWGIKPRIEHYGCMVDLFSRAGLM 395
++FL +L C + G+ +CMN G+ I ++ +++ G +
Sbjct: 253 VGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNA--GLVDDIRVATSLIRMYTTCGSI 310
Query: 396 DEAFSLVQNMPMK 408
+ A + NM ++
Sbjct: 311 EGARRVFDNMKVR 323
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 64/225 (28%)
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEE 310
+D V C E+ D LGK + ++ + GR+ + LN LI +Y+ CG + E
Sbjct: 55 IDSRTYVKLFQRCTELRDAALGKQVRDHIIQG---GRQLNIYELNT-LIKLYSICGNVTE 110
Query: 311 AYGVFRKMQRRNTVSWTSMITGFAKQGYAQEA---------------LLTFLGVLSACS- 354
A +F ++ + V+W ++I G+A+ G+ +EA ++TFL VL ACS
Sbjct: 111 ARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSS 170
Query: 355 ----------------------------------HGGFVDEGRQFFECMNQNWGIKPR-I 379
GG +D+ RQ F+ G+ R +
Sbjct: 171 PAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFD------GLHIRDV 224
Query: 380 EHYGCMVDLFSRAGLMDEAFSL---VQNMPMKPNDAVLGSLLLGC 421
+ MV ++++G ++AF L +Q + +KPN S+L GC
Sbjct: 225 STFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGC 269
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 171/498 (34%), Positives = 279/498 (56%), Gaps = 46/498 (9%)
Query: 63 VTSGYLIN-----AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
+ SGYL N A +F+K WN M+ G+ R+ + + L+++M E D
Sbjct: 1 MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERM----PERD 56
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRV-LASGYCSNVFIRTNLMNLYLMSGGECGVGCAR 176
+++ +LS A+ G E ++ ++ L +G N L+ Y+ +G + A+
Sbjct: 57 IVSWNAMLSGYAQNGFVDEAREIFYKMPLKNGISWN-----GLLAAYVQNGR---IEDAK 108
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
LF+ ++VSWN L+ G+V++ +FD MP R+ +SW+ MI+G +QNG S +
Sbjct: 109 RLFESKMDWTLVSWNCLMGGFVRKRR-----NLFDNMPQRDSISWSAMIAGYSQNGCSEE 163
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH-SYVEENFSVGREPVLVSLN 295
AL F EM+R L++ + ALS C+ I L+LG+ +H V+ + G +
Sbjct: 164 ALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTG-----WYVG 218
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF--------- 346
NAL+ MY CG I+EA F+++ ++ VSW +MI G+A+ G+ +EAL F
Sbjct: 219 NALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIR 278
Query: 347 ------LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFS 400
+ VL+ACSH G VD+G ++F MN+++GI ++ HY CMVDL RAG ++EA +
Sbjct: 279 PDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQN 338
Query: 401 LVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAA 460
L++NMP +P+ A G+LL RIH N EL + AQ ++ E++P + Y+ L++ +YAA+
Sbjct: 339 LMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQ-IIFEMEPHNSGMYI-LLSKLYAAS 396
Query: 461 KRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQA 520
RW D +R +M GV+K PG SW+++ +H F GD+++ IY L E+ ++
Sbjct: 397 GRWSDAGKMRLEMRNKGVKKVPGYSWLEVQNKIHTFKVGDTSHPHTDKIYTFLEEMDLKL 456
Query: 521 MQEGYKPDISELFLGIEE 538
QEGY + +F +EE
Sbjct: 457 KQEGYISSTNLVFHDVEE 474
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/300 (19%), Positives = 126/300 (42%), Gaps = 64/300 (21%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWN--------------------------QMIR 91
LLA YV +G + +A ++FE + + WN MI
Sbjct: 94 LLAAYVQNGRIEDAKRLFESKMDWTLVSWNCLMGGFVRKRRNLFDNMPQRDSISWSAMIA 153
Query: 92 GHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCS 151
G++++ E++++ + +M + +++ LS C+ G Q+H R++ +GY +
Sbjct: 154 GYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQT 213
Query: 152 NVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFD 211
++ L+ +Y G + AR F ++ + VVSWN+++ GY
Sbjct: 214 GWYVGNALLAMYCKCG---SIDEARDAFQEILEKDVVSWNTMIHGY-------------- 256
Query: 212 EMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKL 271
A++G +AL++F M+ + D +V+ L+AC+ G +
Sbjct: 257 -----------------ARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQ 299
Query: 272 GKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMI 330
G + ++ + + V + ++ + G++EEA + + M + +W +++
Sbjct: 300 GSEYFYSMNRDYGITAKLVHYT---CMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALL 356
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 112/257 (43%), Gaps = 12/257 (4%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H +++ G+ Y+ LLA Y G + A F++ WN MI G+AR
Sbjct: 201 QLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARHG 260
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG-EQVHGRVLASGYCSNVFIR 156
E+++ +++ M PD+ T +L+ C+ GL +G E + G + +
Sbjct: 261 FGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHY 320
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPAR-SVVSWNSLLKGYVKRGDID----GAWKIFD 211
T +++L +G + A+ L +MP +W +LL G+ + A IF+
Sbjct: 321 TCMVDLLGRAG---QLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFE 377
Query: 212 EMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKL 271
PH N + + A +G+ A + EMR G+ +V + L +I K+
Sbjct: 378 MEPH-NSGMYILLSKLYAASGRWSDAGKMRLEMRNK--GVKKVPGYSWLEVQNKIHTFKV 434
Query: 272 GKWIHSYVEENFSVGRE 288
G H + ++ ++ E
Sbjct: 435 GDTSHPHTDKIYTFLEE 451
>gi|297804490|ref|XP_002870129.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
gi|297315965|gb|EFH46388.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
Length = 853
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 174/526 (33%), Positives = 277/526 (52%), Gaps = 66/526 (12%)
Query: 53 YILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDK 112
+ L K++A V SG + A VF +T WN ++ G S+ P + + + Q+ D+
Sbjct: 62 FPLNKIIATRVRSGDIDGALSVFHGMRAKNTVSWNSLLVG--ISKDPSRMMEAH-QLFDE 118
Query: 113 ETEPDEYTYSFLLSVCARCGLFREGEQVHGRV----------LASGYCSN---------- 152
EPD ++Y+ +LS R G F + + R+ + +GY
Sbjct: 119 IPEPDTFSYNIMLSCYVRNGNFEKAQSFFNRMPFKDAASWNTMITGYARRGEMEKARVLF 178
Query: 153 -VFIRTNLMNLYLMSGG--ECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWK 208
+ N ++ M G ECG + A F P R VV+W +++ GY+K ++ A
Sbjct: 179 YSMMEKNEVSWNAMISGYIECGDLEKAAHFFKAAPFRGVVAWTAMITGYMKAKKVELAEA 238
Query: 209 IFDEMP-HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIG 267
+F +M +N+V+W MISG +N + L LF M + + L +AL C+E+
Sbjct: 239 MFKDMTVKKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELS 298
Query: 268 DLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
L LG+ IH V MY CGE+ +A+ +F M++++ V+W
Sbjct: 299 ALCLGRQIHQIV---------------------MYCKCGELGDAWKLFEAMKKKDVVAWN 337
Query: 328 SMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQN 372
+MI+G+A+ G A++AL +TF+ VL AC+H G VD G +F+ M ++
Sbjct: 338 AMISGYAQHGNAEKALCLFHEMRDSKTKPDWITFVAVLLACNHAGLVDIGMTYFDSMVRD 397
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQ 432
+ ++PR +HY CMVDL RAG ++EA L+++MP +P+ AV G+LL CR+H N ELA
Sbjct: 398 YRVEPRPDHYTCMVDLLGRAGKVEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEF 457
Query: 433 VAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGV 492
A+KL+ E+DP AAGY+ L AN+YA+ W+DVA VR++M + V K PG SW++I
Sbjct: 458 AAEKLL-ELDPRNAAGYVQL-ANIYASKNLWEDVARVRKRMKESNVVKVPGYSWIEIRNK 515
Query: 493 LHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+H F + D + + I+K L E+ + GYKP++ +EE
Sbjct: 516 IHHFRSSDRIHPELDSIHKKLKELERKMKLAGYKPELEFALHNVEE 561
>gi|147838430|emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera]
Length = 978
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 174/504 (34%), Positives = 255/504 (50%), Gaps = 60/504 (11%)
Query: 54 ILAKLLAFYVTS--GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEK--SVYLYKQM 109
I KLL F S G L A VF + NP T WN MIRG ++S +P + ++ Y M
Sbjct: 432 ISEKLLNFCAVSVSGSLAYAQLVFHRIHNPQTPAWNSMIRGFSQSPSPLQLQAIVFYNHM 491
Query: 110 ID-KETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGG 168
+ PD YT+SFLL C + +VHG ++ GY +V + TNL
Sbjct: 492 LSASHARPDTYTFSFLLKACEEAKEEGKCREVHGFIIRFGYDQDVVLCTNL--------- 542
Query: 169 ECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGC 228
++ Y G I+ A K+F+EMP R++VSW +MIS
Sbjct: 543 -------------------------IRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCY 577
Query: 229 AQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGRE 288
Q G +AL ++++MR + VG D LV+ LS+CA +G L +G +H + E V E
Sbjct: 578 CQTGLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLV--E 635
Query: 289 PVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----- 343
+ V NALI MYA CG + A +F M +R+ +W SMI G+ G EA+
Sbjct: 636 NIFV--GNALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGS 693
Query: 344 ----------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAG 393
+TFLG+L CSH G V EG Q+F M+ + +KP I+HYGCMVDLF RAG
Sbjct: 694 MLMAGVRPNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAG 753
Query: 394 LMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALV 453
+ EA ++++ P + + + +LL C+IH N E+ + LV AG L+
Sbjct: 754 KLKEALEVIRSSPSQHDPVLWRTLLGSCKIHRNVEIGEMAMRNLVQL--GSLGAGDCVLL 811
Query: 454 ANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTL 513
+ +YA AK Q VA +R+ + G++ PG SW+++ +H FV D ++ + IY+ L
Sbjct: 812 SGIYAEAKDLQGVARMRKLIQSRGIKTTPGWSWIEVGDQVHRFVVDDKSHPDSREIYRKL 871
Query: 514 GEITMQAMQEGYKPDISELFLGIE 537
E+ +A GY + S L E
Sbjct: 872 EEVIHRASLVGYAMEESSLVAAPE 895
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 100/212 (47%), Gaps = 9/212 (4%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H II G+ Q + L+ Y +G + AHKVFE+ WN MI + ++
Sbjct: 522 EVHGFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTG 581
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E+++ +Y QM D +T LLS CA G G Q+H N+F+
Sbjct: 582 LHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGN 641
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM--- 213
L+++Y +CG + A +F+ MP R V +WNS++ GY G D A F M
Sbjct: 642 ALIDMY----AKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMA 697
Query: 214 -PHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
N +++ ++ GC+ G ++ + F+ M
Sbjct: 698 GVRPNSITFLGLLCGCSHQGLVKEGVQYFHMM 729
>gi|5280987|emb|CAB46001.1| hypothetical protein [Arabidopsis thaliana]
gi|7268109|emb|CAB78447.1| hypothetical protein [Arabidopsis thaliana]
Length = 686
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 161/530 (30%), Positives = 289/530 (54%), Gaps = 42/530 (7%)
Query: 28 QIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWN 87
++ T T +H+ I+ G Q + L+ Y G +A +VF++ + W
Sbjct: 82 RMNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWA 141
Query: 88 QMIRGHARSETPEKSVYLYKQMIDKET-EPDEYTYSFLLSVCARCGLFREGEQVHGRVLA 146
++ ++ K++ ++ + PD++ +S L+ CA G G QVH +
Sbjct: 142 SVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIV 201
Query: 147 SGYCSNVFIRTNLMNLYLMSGGECGV-GCARLLFDDMPARSVVSWNSLLKGYVKRGDIDG 205
S Y ++ ++++L+++Y +CG+ A+ +FD + ++ +SW +++ GY K G +
Sbjct: 202 SEYANDEVVKSSLVDMY----AKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 257
Query: 206 AWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG-LDQVALVAALSACA 264
A ++F +P +N+ SWT +ISG Q+GK +A S+F EMRR RV LD + L + + ACA
Sbjct: 258 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 317
Query: 265 EIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTV 324
+ G+ +H NALI MYA C ++ A +F +M+ R+ V
Sbjct: 318 NLAASIAGRQVH------------------GNALIDMYAKCSDVIAAKDIFSRMRHRDVV 359
Query: 325 SWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECM 369
SWTS+I G A+ G A++AL +TF+G++ ACSH GFV++GR+ F+ M
Sbjct: 360 SWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSM 419
Query: 370 NQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAEL 429
+++GI+P ++HY C++DL R+GL+DEA +L+ MP P++ +LL C+ ++
Sbjct: 420 TKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQM 479
Query: 430 ASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQI 489
++A LV+ + + Y+ L++N+YA+A W V+ R+K+ +M VRK PG S V++
Sbjct: 480 GIRIADHLVSSFKLKDPSTYI-LLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEV 538
Query: 490 NGVLHDFVAGDSTYKQASLIYKTLGEITMQA-MQEGYKPDISELFLGIEE 538
F AG++++ I++ L ++ + ++ GY PD S + ++E
Sbjct: 539 RKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDE 588
>gi|413938708|gb|AFW73259.1| hypothetical protein ZEAMMB73_606431 [Zea mays]
Length = 488
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 168/425 (39%), Positives = 238/425 (56%), Gaps = 32/425 (7%)
Query: 125 LSVCARC-GLFREGEQVHGRVLASG---YCSNVFIRTNLMNLYLMSGGECGVGCARLLFD 180
L+ CAR E EQ+H ++ SG S+V T+L+ Y G C AR +FD
Sbjct: 67 LAACARLPSAVAEAEQIHALLVKSGGSRAVSHVQAFTSLIRAYARLGRVCD---ARKVFD 123
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSL 240
M R+VV+WN LL ++ GD+D AW++F +MP RN VSW T+ISG A+NG + A+ L
Sbjct: 124 GMADRTVVTWNVLLDALIRDGDLDAAWEVFVKMPQRNAVSWNTIISGFARNGWAPVAVDL 183
Query: 241 FNEMRRAR-VGLDQVALVAALSACAEIGDLKLGKWIHSYV-EENFSVGREPVLVSLNNAL 298
F EM A + D+ +V +SA +IG L +GK H YV FS+ L AL
Sbjct: 184 FIEMTVAYGLAPDEATMVGFVSAVRDIGLLAIGKSAHGYVLRREFSLDGP-----LGVAL 238
Query: 299 IHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------------- 343
+ MY CG + A+ F + +N WTS+I GFA G + AL
Sbjct: 239 VSMYTRCGSMGAAHSCFLSVTTKNVEHWTSLIAGFAAHGQPENALRLFVEMRQVGIEPNG 298
Query: 344 LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQ 403
+TF+ VLSACSHGG VDEG ++F+ M ++ GI+P I+HYGC+VDL RAG + EAF+L
Sbjct: 299 VTFVAVLSACSHGGLVDEGFKYFDLM-RSMGIRPMIQHYGCLVDLLGRAGFLKEAFNLAS 357
Query: 404 NMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRW 463
N+P P + SLL CR H N E+A A KL AE P + Y+ L++N YA A++W
Sbjct: 358 NLPEDPGFVIWSSLLAACRSHGNVEMAELTASKL-AEAKPSHGSSYV-LLSNTYARAEQW 415
Query: 464 QDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQE 523
+D R++M + V K PG SW++I+G +H F D + ++ IY L ++
Sbjct: 416 EDSKRTRRRMEEHRVAKKPGLSWIEIDGSVHSFATADKLHIESEGIYHMLEDLKHNFTSA 475
Query: 524 GYKPD 528
Y+P+
Sbjct: 476 AYEPE 480
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 10/237 (4%)
Query: 15 SKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAK-LLAFYVTSGYLINAHK 73
S+A++ Q F+ L IR + ++ + +G + + + LL + G L A +
Sbjct: 93 SRAVSHVQAFTSL-IRAYARLGRVCDARKVFDGMADRTVVTWNVLLDALIRDGDLDAAWE 151
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQM-IDKETEPDEYTYSFLLSVCARCG 132
VF K + WN +I G AR+ +V L+ +M + PDE T +S G
Sbjct: 152 VFVKMPQRNAVSWNTIISGFARNGWAPVAVDLFIEMTVAYGLAPDEATMVGFVSAVRDIG 211
Query: 133 LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNS 192
L G+ HG VL + + + L+++Y G +G A F + ++V W S
Sbjct: 212 LLAIGKSAHGYVLRREFSLDGPLGVALVSMYTRCG---SMGAAHSCFLSVTTKNVEHWTS 268
Query: 193 LLKGYVKRGDIDGAWKIFDEMPH----RNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
L+ G+ G + A ++F EM N V++ ++S C+ G + F+ MR
Sbjct: 269 LIAGFAAHGQPENALRLFVEMRQVGIEPNGVTFVAVLSACSHGGLVDEGFKYFDLMR 325
>gi|62321090|dbj|BAD94184.1| hypothetical protein [Arabidopsis thaliana]
Length = 577
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 176/568 (30%), Positives = 295/568 (51%), Gaps = 58/568 (10%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAH 72
++S +L + +++ +T K L + +I +Q ++ + + + L A
Sbjct: 21 SASLSLAPPNLKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKCLDLAV 80
Query: 73 KVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCG 132
+ + P+ ++N + +G P +S+ LY +M+ P YTYS L+ +
Sbjct: 81 STMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFAS 140
Query: 133 LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSW-- 190
F E Q H + G+ +V I+T L++ Y +GG + AR +FD+MP R ++W
Sbjct: 141 RFGESLQAH--IWKFGFGFHVKIQTTLIDFYSATGG---IREARKVFDEMPERDDIAWTT 195
Query: 191 -----------------------------NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSW 221
N L+ GY+ G+++ A +F++MP ++++SW
Sbjct: 196 MVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISW 255
Query: 222 TTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE 281
TTMI G +QN + R+A+++F +M + D+V + +SACA +G L++GK +H Y +
Sbjct: 256 TTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQ 315
Query: 282 NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQE 341
N V + V + +AL+ MY+ CG +E A VF + ++N W S+I G A G+AQE
Sbjct: 316 NGFV----LDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQE 371
Query: 342 AL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMV 386
AL +TF+ V +AC+H G VDEGR+ + M ++ I +EHYG MV
Sbjct: 372 ALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMV 431
Query: 387 DLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQA 446
LFS+AGL+ EA L+ NM +PN + G+LL GCRIH N +A KL+ ++P
Sbjct: 432 HLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMV-LEP-MN 489
Query: 447 AGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKP-PGQSWVQINGVLHDFVAGDSTYKQ 505
+GY L+ ++YA RW+DVA +R +M ++G+ K PG S ++I+ H F A D ++
Sbjct: 490 SGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSA 549
Query: 506 ASLIYKTLGEITMQAMQEGYKPDISELF 533
+ + L EI Q GY + ++
Sbjct: 550 SDEVCLLLDEIYDQMGLAGYVQETENVY 577
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 10/169 (5%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
M+ E IIP + T S ++ +L+I ++H + NGF YI + L+
Sbjct: 278 MMEEGIIP-DEVTMSTVISACAHLGVLEIGK------EVHMYTLQNGFVLDVYIGSALVD 330
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y G L A VF + WN +I G A ++++ ++ +M + +P+ T
Sbjct: 331 MYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVT 390
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGY--CSNVFIRTNLMNLYLMSG 167
+ + + C GL EG +++ R + Y SNV +++L+ +G
Sbjct: 391 FVSVFTACTHAGLVDEGRRIY-RSMIDDYSIVSNVEHYGGMVHLFSKAG 438
>gi|326507168|dbj|BAJ95661.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/494 (32%), Positives = 264/494 (53%), Gaps = 59/494 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTEN--PSTAIWNQMIRGHAR 95
Q+H+ + G S ++L L+ Y + Y A V + T WN +I G+
Sbjct: 114 QLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVLDSAPKGASDTVSWNTIIAGYIH 173
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
+ P K++ + QM + D+ T L CAR + + G+ H ++ +G+ N ++
Sbjct: 174 AGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLVTNGFEINCYM 233
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
++L+++Y K G ++ A +IFD MP
Sbjct: 234 GSSLISMY----------------------------------AKCGQVEDARRIFDGMPD 259
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
RN V WT+MISG Q G+S++A+ LF +M+ A V +D + +S+C ++G L LG+++
Sbjct: 260 RNAVCWTSMISGYTQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYV 319
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
H+Y + + +G++ +S+ N+LI MY+ CG+I++AY +F M +R+ SWT +I GFA
Sbjct: 320 HAYCDIH-GLGKD---ISVKNSLIDMYSKCGDIKKAYDIFCGMVKRDNFSWT-VIMGFAA 374
Query: 336 QGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
G + EAL +TFLGVL++CSHGG V++G + F M+ +GI PRI
Sbjct: 375 NGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSCSHGGLVEQGYRHFHRMSSIYGIAPRI 434
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
EHYGCMVDL RA L+ EA ++ MP+ P+ + SLL CR LA VA++ +
Sbjct: 435 EHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAVMWRSLLFACRTCGEVGLAEYVAER-IQ 493
Query: 440 EIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG 499
++P + G + L++ VYA RW D VR + K PG S+++++G +H+F AG
Sbjct: 494 VLEPNKCGGDV-LLSTVYATTSRWVDANKVRTGIYSGRKTKQPGCSFIEVDGCVHEFFAG 552
Query: 500 DSTYKQASLIYKTL 513
D ++ + IY TL
Sbjct: 553 DESHFETEAIYSTL 566
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 22/173 (12%)
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEE 310
+D +L AALS A + + +G +H+ + + + ++ N LI+MY+SC
Sbjct: 91 IDNYSLSAALSTAARMPSVVVGAQLHA-LSVKLGLSSDTFVL---NTLINMYSSCSYPST 146
Query: 311 AYGVFRKMQR--RNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSAC 353
A V + +TVSW ++I G+ G +AL +T L L AC
Sbjct: 147 ARSVLDSAPKGASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVAC 206
Query: 354 SHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP 406
+ + G+ + N G + ++ ++++ G +++A + MP
Sbjct: 207 ARTCMMKVGKLCHALLVTN-GFEINCYMGSSLISMYAKCGQVEDARRIFDGMP 258
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 166/519 (31%), Positives = 271/519 (52%), Gaps = 59/519 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H+ +I + Y+ +LL FY L +A KV ++ + W MI ++++
Sbjct: 73 RVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTG 132
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ ++ +M+ + +P+E+T++ +L+ C R G+Q+HG ++ Y S++F+ +
Sbjct: 133 HSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGS 192
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
+L+++ Y K G I A +IF+ +P R+
Sbjct: 193 SLLDM----------------------------------YAKAGQIKEAREIFECLPERD 218
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VVS T +I+G AQ G +AL +F+ + + + V + L+A + + L GK H
Sbjct: 219 VVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHC 278
Query: 278 YVEENFSVGRE-PVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+V + RE P L N+LI MY+ CG + A +F M R +SW +M+ G++K
Sbjct: 279 HV-----LRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKH 333
Query: 337 GYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFECM-NQNWGIKPRI 379
G +E L +T L VLS CSHG D G F+ M +G KP
Sbjct: 334 GLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGT 393
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
EHYGC+VD+ RAG +DEAF ++ MP KP VLGSLL CR+H + ++ V ++L+
Sbjct: 394 EHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLI- 452
Query: 440 EIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG 499
EI+PE A Y+ L +N+YA+A RW DV VR M++ V K PG+SW+Q LH F A
Sbjct: 453 EIEPENAGNYVIL-SNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHAN 511
Query: 500 DSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
D T+ + + + EI+++ Q GY PD+S + ++E
Sbjct: 512 DRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDE 550
>gi|357507205|ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498906|gb|AES80109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1288
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 165/478 (34%), Positives = 269/478 (56%), Gaps = 26/478 (5%)
Query: 28 QIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWN 87
+I N + T +H++++ GF ++ L+ Y L A KVF++ WN
Sbjct: 808 RISNVSCT--TVHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKVFDEMSERDLVSWN 865
Query: 88 QMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLAS 147
+I G+ R + + ++++M + + D T ++ C G + + + + +
Sbjct: 866 SLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEEN 925
Query: 148 GYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAW 207
+V++ L+++Y G V AR +FD M R++VSWN+++ GY K G++ A
Sbjct: 926 KVEVDVYLGNTLIDMY---GRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAAR 982
Query: 208 KIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIG 267
K+FD+MPHR+V+SWT+MIS +Q G+ +A+ LF EM +V D++ + + LSACA IG
Sbjct: 983 KLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIG 1042
Query: 268 DLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
L +G+ +H Y+ + + V + + + NALI MY CG +E+ VF +M +R++VSWT
Sbjct: 1043 ALDVGEAVHEYIRK-YDVNAD---IYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVSWT 1098
Query: 328 SMITGFAKQGYAQEALL---------------TFLGVLSACSHGGFVDEGRQFFECMNQN 372
S+I G A G A AL TF+GVL AC+H G VD+G ++FE M +
Sbjct: 1099 SVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLEYFESMERV 1158
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQ 432
+G+ P ++HYGC+VDL SR+G + A+ ++ MPM P+ V LL ++H N LA +
Sbjct: 1159 YGLTPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRILLSASQVHGNLHLA-E 1217
Query: 433 VAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQIN 490
+A K + E DP + Y+ L +N YA + RW+DV +R+ M + V KP S V+IN
Sbjct: 1218 IATKKLLETDPSNSGNYI-LSSNTYAGSNRWEDVIKMRRLMEESNVHKPSASSSVEIN 1274
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 169/371 (45%), Gaps = 67/371 (18%)
Query: 54 ILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKE 113
I L ++ ++ ++ A+++F + P+ + WN MIRG +++ P +++ Y M +
Sbjct: 732 IFNLLKSYALSPTNILKANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYSQA 791
Query: 114 TEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVG 173
+ TY FLL CAR VH RVL G+ S++F+ L++ Y G C +G
Sbjct: 792 LFGNNLTYPFLLKACARISNV-SCTTVHARVLKLGFDSDLFVSNALIHGY---AGFCELG 847
Query: 174 CARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGK 233
AR +FD+M R +VSWNSL+ GY G + + E+
Sbjct: 848 FARKVFDEMSERDLVSWNSLICGY-------GRCRRYSEV-------------------- 880
Query: 234 SRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVS 293
L +F EMR A V D V +V + AC +G+ + + Y+EEN + V V
Sbjct: 881 ----LVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEEN----KVEVDVY 932
Query: 294 LNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSAC 353
L N LI MY ++ A VF +M+ RN VSW +MI G+ K G A
Sbjct: 933 LGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAA----------- 981
Query: 354 SHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM---PMKPN 410
R+ F+ M I + M+ +S+AG +A L Q M +KP+
Sbjct: 982 ---------RKLFDDMPHRDVIS-----WTSMISSYSQAGQFGKAVRLFQEMMVTKVKPD 1027
Query: 411 DAVLGSLLLGC 421
+ + S+L C
Sbjct: 1028 EITVASVLSAC 1038
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 172/525 (32%), Positives = 287/525 (54%), Gaps = 33/525 (6%)
Query: 31 NTTKTLFQIHSQII--INGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQ 88
N ++HS I+ + SQ ++ L+ Y G L A ++FE + + W
Sbjct: 74 NAISAARRLHSHILSLPHSNSQPPFLANLLIEMYGKCGRLPYARELFESMPSRNVHTWTV 133
Query: 89 MIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGL--FREGEQVHGRVLA 146
+ + + +++ +++M PD T+S +L+ A+ G +G ++H
Sbjct: 134 AMAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARI 193
Query: 147 SGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDG 205
SG NV + T ++++Y G+CG + AR F+++ ++ V+WN+++ Y G
Sbjct: 194 SGLLPNVVVGTAVISMY----GKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDRE 249
Query: 206 AWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR-VGLDQVALVAALSACA 264
A ++F EM + V W MI+ AQ+G+ +QAL L+ M + Q V + CA
Sbjct: 250 ALELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCA 309
Query: 265 EIGDLKLGKWIHSYVE-ENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNT 323
E+ LK G+ IH+ V NF +LVS NAL+HMY CG ++EA VF M+ ++
Sbjct: 310 ELSALKQGRAIHARVRATNFDAN---LLVS--NALVHMYGKCGCLDEALDVFHSMKLKDE 364
Query: 324 VSWTSMITGFAKQGYAQEALL---------------TFLGVLSACSHGGFVDEGRQFFEC 368
+SW ++I+ +A G++ +ALL TF+G+LSACSHGG V +G +F
Sbjct: 365 ISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYR 424
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAE 428
M + IKP + H+GC++DL R G + EA ++++MP++ N SLL C+ H + +
Sbjct: 425 MQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLK 484
Query: 429 LASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
+ A ++V + P + GY+ L++N+YAAA RW+DV +R+ M GV+K PG+SW++
Sbjct: 485 RGVRAADQVVDRV-PWTSGGYV-LLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIE 542
Query: 489 INGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELF 533
I V+H+FV+GDS++ Q IY LG++ + GY PD S +F
Sbjct: 543 IGDVVHEFVSGDSSHPQGEEIYVELGKMVEEMKGLGYVPDTSSVF 587
>gi|414883628|tpg|DAA59642.1| TPA: hypothetical protein ZEAMMB73_113196, partial [Zea mays]
Length = 635
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 162/421 (38%), Positives = 245/421 (58%), Gaps = 29/421 (6%)
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMP-ARSVVSWNSLL 194
G VH + +G ++++R ++ Y G CG V R +FD++P R VV+WN++L
Sbjct: 151 GTHVHALAVKAGAAGDLYVRNAQIHFY----GVCGDVAAMRKVFDELPIVRDVVTWNAVL 206
Query: 195 KGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQV 254
GYV+ G + A ++FD MP R+ VSW+T+I G + G+ AL +F M V ++
Sbjct: 207 AGYVRAGMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNMVAQGVKANEA 266
Query: 255 ALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGV 314
A+V ALSA A++G L+ GK++H V+ VG + V+L ALI MY+ CG + A V
Sbjct: 267 AIVTALSAAAQLGLLEQGKFVHEVVKR---VGMT-MSVNLGAALIDMYSKCGSVAAAKEV 322
Query: 315 FRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFV 359
F M RR+ +W SMI G A G +A+ +TF+GVL+ACS G V
Sbjct: 323 FDAMPRRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLNACSRTGLV 382
Query: 360 DEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLL 419
DEGR++F+ M + + I+ +EHYGCMVDL SRAGL+ EA L++ M + P+ + G++L
Sbjct: 383 DEGRRYFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPPDPVLWGTILS 442
Query: 420 GCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVR 479
C+ H +L V KL+ E+DP GY L+A++YA AK+W +V VR+ M G
Sbjct: 443 ACKRHGLVDLGITVGNKLI-ELDPAH-DGYYVLLASIYAKAKKWDEVRKVRKLMSNRGTS 500
Query: 480 KPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELF--LGIE 537
K G S ++ +G++H F+ GD +K ++ IY L I + + GY PD+S + +G E
Sbjct: 501 KSAGWSLMEAHGIVHKFLVGDMNHKDSARIYNMLCTINRRLAEAGYVPDVSSVLHDIGDE 560
Query: 538 E 538
E
Sbjct: 561 E 561
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 124/307 (40%), Gaps = 60/307 (19%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
+LA YV +G + A +VF+ W+ +I G+ + PE ++ ++K M+ + + +
Sbjct: 205 VLAGYVRAGMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNMVAQGVKAN 264
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCAR 176
E LS A+ GL +G+ VH V G +V + L+++Y +CG V A+
Sbjct: 265 EAAIVTALSAAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMY----SKCGSVAAAK 320
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
+FD MP R V +WNS MI G A +G
Sbjct: 321 EVFDAMPRRDVFAWNS-------------------------------MICGLATHGLGHD 349
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
A+ LF + + V L+AC+ G + G+ + E + + E +
Sbjct: 350 AVQLFEKFVSEGFCPTSITFVGVLNACSRTGLVDEGRRYFKLMAEKYDIESE---MEHYG 406
Query: 297 ALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSH 355
++ + + G ++EA + M+ + V W + +LSAC
Sbjct: 407 CMVDLLSRAGLVQEAVELIEGMRIPPDPVLWGT--------------------ILSACKR 446
Query: 356 GGFVDEG 362
G VD G
Sbjct: 447 HGLVDLG 453
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 6/138 (4%)
Query: 2 LVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAF 61
+V + + AN A AL+ LL+ + F +H + G + + A L+
Sbjct: 256 MVAQGVKANEAAIVTALSAAAQLGLLE-----QGKF-VHEVVKRVGMTMSVNLGAALIDM 309
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
Y G + A +VF+ WN MI G A +V L+++ + + P T+
Sbjct: 310 YSKCGSVAAAKEVFDAMPRRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITF 369
Query: 122 SFLLSVCARCGLFREGEQ 139
+L+ C+R GL EG +
Sbjct: 370 VGVLNACSRTGLVDEGRR 387
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 173/517 (33%), Positives = 266/517 (51%), Gaps = 58/517 (11%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
IH+ I N F + LL Y L A K+F + W+ MI G+ ++
Sbjct: 232 IHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDS 291
Query: 99 PEKSVYLYKQMI-DKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++ LY M+ P T + +L CA+ + G+++H ++ SG
Sbjct: 292 ISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSG--------- 342
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
M+L + VG NSL+ Y K G +D A DEM ++
Sbjct: 343 --MDL------DTTVG-----------------NSLISMYAKCGIMDNAVGFLDEMIAKD 377
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VS++ +ISGC QNG + +AL +F +M+ + + ++A L AC+ + L+ G H
Sbjct: 378 TVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHG 437
Query: 278 Y-VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
Y V F+ S+ NA+I MY+ CG+I + +F +MQ R+ +SW +MI G+
Sbjct: 438 YTVVRGFTND-----TSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIH 492
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G EAL +T + VLSACSH G V EG+ +F M+QN+ IKPR+ H
Sbjct: 493 GLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAH 552
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
Y CMVDL +RAG +DEA++ +Q MP PN + G+LL CR H N E+ QV++K + +
Sbjct: 553 YICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKK-IQLL 611
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
PE G L++N+Y++ RW D A +R G +K PG SWV+I+GV+H F+ G
Sbjct: 612 GPE-GTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQ 670
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++ Q++ I K L E+ +Q + GY+ D S + +EE
Sbjct: 671 SHPQSASINKKLQELLVQMKKLGYRADSSFVLHDVEE 707
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 164/392 (41%), Gaps = 58/392 (14%)
Query: 57 KLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEP 116
+L ++++ + A VF++ PS +WN MIR +A S ++S+YLY M+ P
Sbjct: 46 QLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTP 105
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCAR 176
+T+ FLL C+ + G +H G ++++ T L+++Y
Sbjct: 106 TNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMY------------- 152
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH--RNVVSWTTMISGCAQNGKS 234
K G + A +F+ + H R++V+W MI+ + +
Sbjct: 153 ---------------------AKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALH 191
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
Q + +M++A V + LV+ L + L GK IH+Y NF V L
Sbjct: 192 AQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDN----VVL 247
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------- 343
AL+ MYA C + A +F + ++N V W++MI G+ +AL
Sbjct: 248 QTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYG 307
Query: 344 -----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEA 398
T +L AC+ + G++ C G+ ++ ++++ G+MD A
Sbjct: 308 LNPTPATLATMLRACAQLTDLKRGKK-LHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNA 366
Query: 399 FSLVQNMPMKPNDAVLGSLLLGCRIHNNAELA 430
+ M K + +++ GC + AE A
Sbjct: 367 VGFLDEMIAK-DTVSYSAIISGCVQNGYAEKA 397
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 136/310 (43%), Gaps = 43/310 (13%)
Query: 10 NPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLI 69
NP ++ A R L ++ K +H +I +G + L++ Y G +
Sbjct: 309 NPTPATLATMLRACAQLTDLKRGKK----LHCHMIKSGMDLDTTVGNSLISMYAKCGIMD 364
Query: 70 NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
NA ++ T ++ +I G ++ EK++ +++QM P T LL C+
Sbjct: 365 NAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACS 424
Query: 130 RCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVV 188
+ G HG + G+ ++ I ++++Y +CG + +R +FD M R ++
Sbjct: 425 HLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMY----SKCGKITISREIFDRMQNRDII 480
Query: 189 SWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR 248
SWN+++ GY +G +ALSLF E++
Sbjct: 481 SWNTMIIGY-------------------------------GIHGLCVEALSLFQELQALG 509
Query: 249 VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEI 308
+ D V L+A LSAC+ G + GK+ S + +NF++ +P + ++ + A G +
Sbjct: 510 LKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNI--KPRMAHY-ICMVDLLARAGNL 566
Query: 309 EEAYGVFRKM 318
+EAY ++M
Sbjct: 567 DEAYTFIQRM 576
>gi|356502600|ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 518
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 178/524 (33%), Positives = 274/524 (52%), Gaps = 36/524 (6%)
Query: 20 TRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAF--YVTSGYLINAHKVFEK 77
+++ LL+ L Q H+Q+ G + L++LLAF + G L A +VFE+
Sbjct: 5 SKRCLVLLEKCKNVNHLKQAHAQVFTTGLDTNTFALSRLLAFCSHPYQGSLTYACRVFER 64
Query: 78 TENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+P+ I N +I+ + + +++ +M+ PD YT ++L CA G
Sbjct: 65 IHHPTLCICNTIIKTFLVNGNFYGTFHVFTKMLHNGLGPDNYTIPYVLKACAALRDCSLG 124
Query: 138 EQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGY 197
+ VHG G ++F+ +LM +Y + G V AR +FD+MP S VSW+ ++ GY
Sbjct: 125 KMVHGYSSKLGLVFDIFVGNSLMAMYSVCGD---VIAARHVFDEMPRLSAVSWSVMISGY 181
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
K GD+D A FDE P ++ W MISG QN ++ L LF ++ V D+ V
Sbjct: 182 AKVGDVDSARLFFDEAPEKDRGIWGAMISGYVQNSCFKEGLYLFRLLQLTHVVPDESIFV 241
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVS--LNNALIHMYASCGEIEEAYGVF 315
+ LSACA +G L +G WIH Y+ R+ V +S L+ +L+ MYA CG +E A +F
Sbjct: 242 SILSACAHLGALDIGIWIHRYLN------RKTVSLSIRLSTSLLDMYAKCGNLELAKRLF 295
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVD 360
M R+ V W +MI+G A G AL +TF+ V +ACS+ G
Sbjct: 296 DSMPERDIVCWNAMISGLAMHGDGASALKMFSEMEKTGIKPDDITFIAVFTACSYSGMAH 355
Query: 361 EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKP---NDAVLG-- 415
EG Q + M+ + I+P+ EHYGC+VDL SRAGL EA +++ + ++ L
Sbjct: 356 EGLQLLDKMSSLYEIEPKSEHYGCLVDLLSRAGLFGEAMVMIRRITSTSWNGSEETLAWR 415
Query: 416 SLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIK 475
+ L C H A+LA + A++L + E +G L++N+YAA+ + D VR M
Sbjct: 416 AFLSACCNHGQAQLAERAAKRL---LRLENHSGVYVLLSNLYAASGKHSDARRVRNMMRN 472
Query: 476 MGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
GV K PG S V+I+GV+ +F+AG+ T+ Q I+ L + MQ
Sbjct: 473 KGVDKAPGCSSVEIDGVVSEFIAGEETHPQMEEIHSVLEILHMQ 516
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/521 (31%), Positives = 274/521 (52%), Gaps = 60/521 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H + +G + L+ Y G A +VF ++ WN MI A+S
Sbjct: 307 QVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSS 366
Query: 98 TPEKSVYLYKQMIDKETEPDEYTY-SFLLSVCAR-CG---LFREGEQVHGRVLASGYCSN 152
E+SV L+ ++ + +PD +T S L+ A+ CG L +G+Q+H + +G+ S+
Sbjct: 367 LEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSD 426
Query: 153 VFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDE 212
+ + + ++++Y +K GD+ A +F+
Sbjct: 427 LHVNSGILDMY----------------------------------IKCGDMVNAGIVFNY 452
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
+ + V+WT+MISGC NG QAL +++ MR++RV D+ + A + + L+ G
Sbjct: 453 ISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQG 512
Query: 273 KWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
+ +H+ V + V +P + +L+ MYA CG IE+AY +F+KM RN W +M+ G
Sbjct: 513 RQLHANVIKLDCVS-DPFV---GTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVG 568
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
A+ G A+EA+ ++F+G+LSACSH G E ++ M ++GI+P
Sbjct: 569 LAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEP 628
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
IEHY C+VD RAGL+ EA +++ MP K + ++ +LL CRI + E +VA +L
Sbjct: 629 EIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARL 688
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
A ++P +A Y+ L++N+YAAA RW DV R+ M + V+K PG SW+ + +LH FV
Sbjct: 689 FA-LEPFDSAAYV-LLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFV 746
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
D ++ QA +IY + E+ ++GY PD + L +E+
Sbjct: 747 VDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVED 787
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 200/438 (45%), Gaps = 75/438 (17%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H I G ++ L+ Y G + +A +F+ +WN M++G+ +
Sbjct: 205 VHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGL 264
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGL--FREGEQVHGRVLASGYCSNVFIR 156
+++ L+ + PDE++ +L+ C G G+QVHG + SG S+V +
Sbjct: 265 EKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVA 324
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
+L+N+Y +GCA Y R ++F++M H
Sbjct: 325 NSLVNMY------SKMGCA---------------------YFAR-------EVFNDMKHL 350
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNE-----MRRARVGLDQVALVAALSACAEIGDLKL 271
+++SW +MIS CAQ+ ++++LF + ++ L + L A AC + L
Sbjct: 351 DLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQ 410
Query: 272 GKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMIT 331
GK IH++ G + L +N+ ++ MY CG++ A VF + + V+WTSMI+
Sbjct: 411 GKQIHAHA---IKAGFDSDL-HVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMIS 466
Query: 332 GFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQF------FECMN 370
G G +AL TF ++ A S +++GRQ +C++
Sbjct: 467 GCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVS 526
Query: 371 QNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELA 430
P + +VD++++ G +++A+ L + M ++ N A+ ++L+G H NAE A
Sbjct: 527 D-----PFVG--TSLVDMYAKCGNIEDAYRLFKKMNVR-NIALWNAMLVGLAQHGNAEEA 578
Query: 431 SQVAQKLVAE-IDPEQAA 447
+ + + + I+P++ +
Sbjct: 579 VNLFKSMKSHGIEPDRVS 596
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 188/426 (44%), Gaps = 69/426 (16%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS--- 96
H++I+++G + +++ LL Y G L +A +VF+ T WN ++ +A S
Sbjct: 100 HARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDS 159
Query: 97 --ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVF 154
++ ++L++ + T + +L +C G E VHG + G +VF
Sbjct: 160 NDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVF 219
Query: 155 IRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
+ L+N+Y +CG + ARLLFD M R VV WN +LKGYV
Sbjct: 220 VSGALVNIY----SKCGRMRDARLLFDWMRERDVVLWNMMLKGYV--------------- 260
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSAC--AEIGDLKL 271
Q G ++A LF+E R+ + D+ ++ L+ C A DL+L
Sbjct: 261 ----------------QLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLEL 304
Query: 272 GKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMIT 331
GK +H ++ G + VS+ N+L++MY+ G A VF M+ + +SW SMI+
Sbjct: 305 GKQVHGIAVKS---GLDSD-VSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMIS 360
Query: 332 GFAKQGYAQEALLTFLGVL--------------------SACSHGGFVDEGRQFFECMNQ 371
A+ +E++ F+ +L AC +D+G+Q
Sbjct: 361 SCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQ-IHAHAI 419
Query: 372 NWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELAS 431
G + ++D++ + G M A +V N P+D S++ GC + N + A
Sbjct: 420 KAGFDSDLHVNSGILDMYIKCGDMVNA-GIVFNYISAPDDVAWTSMISGCVDNGNEDQAL 478
Query: 432 QVAQKL 437
++ ++
Sbjct: 479 RIYHRM 484
>gi|115448475|ref|NP_001048017.1| Os02g0730900 [Oryza sativa Japonica Group]
gi|46390470|dbj|BAD15931.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|46390866|dbj|BAD16370.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537548|dbj|BAF09931.1| Os02g0730900 [Oryza sativa Japonica Group]
gi|125541007|gb|EAY87402.1| hypothetical protein OsI_08809 [Oryza sativa Indica Group]
gi|125583571|gb|EAZ24502.1| hypothetical protein OsJ_08263 [Oryza sativa Japonica Group]
Length = 488
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 163/426 (38%), Positives = 250/426 (58%), Gaps = 33/426 (7%)
Query: 125 LSVCARC--GLFREGEQVHGRVLASG---YCSNVFIRTNLMNLYLMSGGECGVGCARLLF 179
L+ CAR E EQ+H ++ SG S V+ T+L+ +Y G +G AR +F
Sbjct: 67 LAACARLLPSAAAEAEQIHALLVKSGDPPSVSGVYASTSLVRVYARLGR---LGDARKMF 123
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
D MP ++VVSWN LL G V+ D+D AW++F EMP RNVVSW T+I+G ++G ++A+
Sbjct: 124 DGMPVKTVVSWNVLLDGIVRASDLDAAWEVFVEMPERNVVSWNTVIAGFVRHGWVQEAVD 183
Query: 240 LFNEMRRAR-VGLDQVALVAALSACAEIGDLKLGKWIHSYV-EENFSVGREPVLVSLNNA 297
LF EM + D+ +V +SA ++G L +G+ H YV FS+ +L A
Sbjct: 184 LFAEMTVVYGLAPDEATMVGFVSAVRDMGVLGIGRCAHGYVIRREFSLDG-----ALGVA 238
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------------- 343
LI+MY CG + +A+ F + +N WTS+I GFA G+ + AL
Sbjct: 239 LINMYTRCGSMGDAFRCFSSVASKNVEQWTSVIGGFAAHGHPEMALRLFTEMRQLGIEPN 298
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
+TFL VL+ACSHGG V+EG ++F M ++ GIK ++HYGC++DL RAG ++EAF L
Sbjct: 299 GVTFLAVLNACSHGGLVNEGFKYFNLM-RSMGIKSTMQHYGCLIDLLGRAGFLEEAFELA 357
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKR 462
++P P + SLL C+ H N E+A A+KL A +P + Y+ L++N YA A +
Sbjct: 358 SSLPEDPGLVIWSSLLAACQSHGNVEMAEVAARKL-AHAEPRHGSSYV-LLSNTYARAGQ 415
Query: 463 WQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQ 522
W+D+ R+KM + GV K PG SW++++G +H FV+ D + ++ IY+ L ++ + +
Sbjct: 416 WEDLKRTRRKMEEYGVMKQPGLSWIELDGRVHSFVSADKLHTESEDIYQMLEDLKVNLVS 475
Query: 523 EGYKPD 528
G +P+
Sbjct: 476 AGSEPE 481
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 139/317 (43%), Gaps = 26/317 (8%)
Query: 38 QIHSQIIINGFSQKN---YILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHA 94
QIH+ ++ +G Y L+ Y G L +A K+F+ + WN ++ G
Sbjct: 83 QIHALLVKSGDPPSVSGVYASTSLVRVYARLGRLGDARKMFDGMPVKTVVSWNVLLDGIV 142
Query: 95 RSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCG-------LFREGEQVHGRVLAS 147
R+ + + ++ +M ++ +++ +++ R G LF E V+G LA
Sbjct: 143 RASDLDAAWEVFVEMPERNV----VSWNTVIAGFVRHGWVQEAVDLFAEMTVVYG--LAP 196
Query: 148 GYCSNVFIRTNLMNLYLMSGGECGVG-CARLLFDDMPARSVVSWNSLLKGYVKRGDIDGA 206
+ V + + ++ ++ G C G R F A V +L+ Y + G + A
Sbjct: 197 DEATMVGFVSAVRDMGVLGIGRCAHGYVIRREFSLDGALGV----ALINMYTRCGSMGDA 252
Query: 207 WKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEI 266
++ F + +NV WT++I G A +G AL LF EMR+ + + V +A L+AC+
Sbjct: 253 FRCFSSVASKNVEQWTSVIGGFAAHGHPEMALRLFTEMRQLGIEPNGVTFLAVLNACSHG 312
Query: 267 GDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVS 325
G + G Y S+G + + LI + G +EEA+ + + + V
Sbjct: 313 GLVNEG---FKYFNLMRSMGIKSTMQHY-GCLIDLLGRAGFLEEAFELASSLPEDPGLVI 368
Query: 326 WTSMITGFAKQGYAQEA 342
W+S++ G + A
Sbjct: 369 WSSLLAACQSHGNVEMA 385
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 107/247 (43%), Gaps = 18/247 (7%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
H +I FS + L+ Y G + +A + F + + W +I G A P
Sbjct: 221 HGYVIRREFSLDGALGVALINMYTRCGSMGDAFRCFSSVASKNVEQWTSVIGGFAAHGHP 280
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
E ++ L+ +M EP+ T+ +L+ C+ GL EG + + + G S + L
Sbjct: 281 EMALRLFTEMRQLGIEPNGVTFLAVLNACSHGGLVNEGFKYFNLMRSMGIKSTMQHYGCL 340
Query: 160 MNLYLMSGG-ECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH--- 215
++L +G E A L +D +V W+SLL G+++ A ++ H
Sbjct: 341 IDLLGRAGFLEEAFELASSLPED---PGLVIWSSLLAACQSHGNVEMAEVAARKLAHAEP 397
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
R+ S+ + + A+ G+ + +++R R +++ ++ + ++L +
Sbjct: 398 RHGSSYVLLSNTYARAGQ-------WEDLKRTRRKMEEYGVMKQ----PGLSWIELDGRV 446
Query: 276 HSYVEEN 282
HS+V +
Sbjct: 447 HSFVSAD 453
>gi|125564656|gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indica Group]
Length = 644
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/472 (33%), Positives = 268/472 (56%), Gaps = 26/472 (5%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
H ++ GF + ++ LL Y ++G L ++ + F++ + + WN MI G+A++
Sbjct: 133 HGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQAGNT 192
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
++ L++ M + DE+T LL C+ G G+ VH +L G ++ + L
Sbjct: 193 REACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANAL 252
Query: 160 MNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
+++Y G+CG + A FD MP ++ VSW S+L KR ID A F+++P +++
Sbjct: 253 VDMY----GKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSI 308
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
+SW MIS Q G+ +AL L+N M+ + D+ L A LSAC ++GDL GK IH
Sbjct: 309 ISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDC 368
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ +NF P V+L N+L+ MYA CG+++ A +F +M +N +SW ++I A G
Sbjct: 369 IRDNF---HNPG-VALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGR 424
Query: 339 AQEALL---------------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
AQ+AL+ TF+ +LSAC+HGG ++ G+ +F+ M + +KP +EHY
Sbjct: 425 AQDALMFFRSMVSDAFPPDEITFVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEHYA 484
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
CMVDL R G + +A L+++MPM+P+ V G+LL CRIH + ++ QV ++L+ E++
Sbjct: 485 CMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGHIQIGKQVIKQLL-ELE- 542
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHD 495
+ G L++N+ +W+D+ +R+ M + G++K G S ++ N +H+
Sbjct: 543 GMSGGLFVLISNMLYETHQWEDMKRLRKLMREWGMKKNMGVSSIETNSNIHE 594
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 135/494 (27%), Positives = 228/494 (46%), Gaps = 98/494 (19%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVT---SGYLI 69
++ A + R + LL+ + L Q+H+ ++++G + +++LA Y G +
Sbjct: 5 SAGGASSARHVRELLRRCGSVHRLNQLHAHLVVHGVDD---VTSQILASYCALPAGGGVW 61
Query: 70 NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
A ++F++ +P ++N +IR + S P++++ L + MI + P+E+T FLL CA
Sbjct: 62 YARQLFDRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACA 121
Query: 130 RCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVS 189
R + HG V+ G+ VF+ L++ Y +G +G +R FD+M R+VVS
Sbjct: 122 RVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAG---SLGDSRRFFDEMVDRNVVS 178
Query: 190 WNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARV 249
WNS++ GY AQ G +R+A SLF MRR +
Sbjct: 179 WNSMINGY-------------------------------AQAGNTREACSLFEGMRRQGL 207
Query: 250 GLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIE 309
D+ LV+ L AC+ G+L+ GK +HS++ G L+ L NAL+ MY CG++
Sbjct: 208 LADEFTLVSLLFACSAEGNLEFGKLVHSHL---LVRGCRIDLI-LANALVDMYGKCGDLL 263
Query: 310 EAYGVFRKMQRRNTVSWTSMITGFAKQ-------------------------------GY 338
A+ F M +N VSWTSM+ AK+ G
Sbjct: 264 MAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGR 323
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
EAL T VLSAC G + G+ +C+ N+ P + +
Sbjct: 324 FHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFH-NPGVALFN 382
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPN---DAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
++D+++R G +D A SL MP K +A++G+L + H A+ A + +V++
Sbjct: 383 SLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAM----HGRAQDALMFFRSMVSD 438
Query: 441 IDPEQAAGYLALVA 454
P ++AL++
Sbjct: 439 AFPPDEITFVALLS 452
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 68/167 (40%), Gaps = 5/167 (2%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
IH I N + + LL Y G + A +F + + + WN +I A
Sbjct: 365 IHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGR 424
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
+ ++ ++ M+ PDE T+ LLS C GL G Q + + + Y +
Sbjct: 425 AQDALMFFRSMVSDAFPPDEITFVALLSACNHGGLLEAG-QYYFQAMRHVYNVKPGVEHY 483
Query: 159 LMNLYLMS-GGECGVGCARLLFDDMPAR-SVVSWNSLLKGYVKRGDI 203
+ L+ GG+ + A L DMP R VV W +LL G I
Sbjct: 484 ACMVDLLGRGGQ--LAKAVDLIKDMPMRPDVVVWGALLGACRIHGHI 528
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 163/502 (32%), Positives = 271/502 (53%), Gaps = 44/502 (8%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
L++ YV G + A ++F++ WN M+ G+AR + +++ D D
Sbjct: 199 LMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYAR----RGDMVEARRLFDAAPVRD 254
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCS-----NVFIRTNLMNLYLMSGGECGV 172
+T++ ++S A+ G+ E +V + S +I+ +M+
Sbjct: 255 VFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDE---------- 304
Query: 173 GCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNG 232
A+ LF+ MP R+V SWN++L GY + G ++ A +FD MP ++ VSW M++ +Q G
Sbjct: 305 --AKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGG 362
Query: 233 KSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS-YVEENFSVGREPVL 291
S + L LF EM R +++ A LS CA+I L+ G +H + + VG
Sbjct: 363 CSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVG----- 417
Query: 292 VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------- 343
+ NAL+ MY CG +E+A F +M+ R+ VSW +MI G+A+ G+ +EAL
Sbjct: 418 CFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRT 477
Query: 344 -------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMD 396
+T +GVL+ACSH G V++G +F M+ ++G+ + EHY CM+DL RAG +
Sbjct: 478 TSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLA 537
Query: 397 EAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANV 456
EA L+++MP +P+ + G+LL RIH N EL A+K+ E++PE A Y+ L++N+
Sbjct: 538 EAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIF-ELEPENAGMYV-LLSNI 595
Query: 457 YAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEI 516
YA++ +W+D +R M + GV+K PG SW+++ +H F AGD + + IY L ++
Sbjct: 596 YASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDL 655
Query: 517 TMQAMQEGYKPDISELFLGIEE 538
M+ + GY + +EE
Sbjct: 656 DMRMKKAGYVSATDMVLHDVEE 677
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 157/348 (45%), Gaps = 57/348 (16%)
Query: 57 KLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEP 116
K + ++ +G + +A ++F ST+ +N M+ G++ + + L++ + P
Sbjct: 43 KAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAI----PRP 98
Query: 117 DEYTYSFLLSVCARC-------GLFRE---GEQVHGRVLASGYCSNVFIR---------- 156
D Y+Y+ LL A GLF E + V V+ S + ++ +
Sbjct: 99 DNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAP 158
Query: 157 -------TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKI 209
++ Y+ +G V AR LF+ V+SWN+L+ GYV+ G + A ++
Sbjct: 159 EKDAVSWNGMLAAYVRNGR---VEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEAREL 215
Query: 210 FDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDL 269
FD MP R+VVSW M+SG A+ G +A LF+ A D A +S A+ G L
Sbjct: 216 FDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD----AAPVRDVFTWTAVVSGYAQNGML 271
Query: 270 KLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSM 329
+ + + + E +V NA++ Y ++EA +F M RN SW +M
Sbjct: 272 EEARRVFDAMPERNAVSW--------NAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTM 323
Query: 330 ITGFAKQGYAQEALLTF-----------LGVLSACSHGGFVDEGRQFF 366
+TG+A+ G +EA F +L+A S GG +E Q F
Sbjct: 324 LTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLF 371
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 118/296 (39%), Gaps = 69/296 (23%)
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
V+ N + +++ G + A ++F MP R+ ++ M++G + NG+ A SLF + R
Sbjct: 38 VIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR 97
Query: 247 ARVGLDQVALVAALSACAEIGDLK---------------------LGKWIHSYVEENFSV 285
L+ AL+ + + D + + S F +
Sbjct: 98 PD-NYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDL 156
Query: 286 GREPVLVSLN------------------------------NALIHMYASCGEIEEAYGVF 315
E VS N NAL+ Y G++ EA +F
Sbjct: 157 APEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELF 216
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEA-----------LLTFLGVLSACSHGGFVDEGRQ 364
+M R+ VSW M++G+A++G EA + T+ V+S + G ++E R+
Sbjct: 217 DRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARR 276
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
F+ M + + + MV + + +MDEA L MP + N A ++L G
Sbjct: 277 VFDAMPERNAVS-----WNAMVAAYIQRRMMDEAKELFNMMPCR-NVASWNTMLTG 326
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
Q+H ++I G+ ++ LLA Y G + +A FE+ E WN MI G+AR
Sbjct: 403 MQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARH 462
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
++++ ++ M T+PD+ T +L+ C+ GL +G
Sbjct: 463 GFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKG 503
>gi|224091939|ref|XP_002309408.1| predicted protein [Populus trichocarpa]
gi|222855384|gb|EEE92931.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 169/560 (30%), Positives = 296/560 (52%), Gaps = 96/560 (17%)
Query: 7 IPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSG 66
+P N ++S+ +++ L++ T L Q H+ II G Q ++I++ L+ +
Sbjct: 1 MPLNLSSSNPSISL-----LIKSCKTIPHLHQFHAHIIHKGLEQDHFIISHFLSISTSVS 55
Query: 67 YLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETE-PDEYTYSFLL 125
Y + +F + NPST ++N +++ +++ + L+ +M E D+YTY L+
Sbjct: 56 Y---STSIFNRLLNPSTFLYNILLKIFSKNSQFIDTFSLFYRMKQSEYALSDKYTYPLLI 112
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPA 184
VC+ +EGE VHG + G +V++ ++L++ Y G+C + AR +FD++P
Sbjct: 113 KVCSNELRLKEGEIVHGSAIRCGVSDDVYVGSSLISFY----GKCKEILSARKVFDEIPE 168
Query: 185 RSVVSWNSLLKGYV-------------------------------KRGDIDGAWKIFDEM 213
R+VVSW +++ GY K GD+ GA K+FDEM
Sbjct: 169 RNVVSWTAMVAGYASVGDLENAKRVFERMPERNLPSWNAMISGLGKAGDLSGARKVFDEM 228
Query: 214 -------------------------------PHRNVVSWTTMISGCAQNGKSRQALSLFN 242
P ++VV+W+ +ISG ++N + +A+ +F
Sbjct: 229 VERNVVSFTVMIDGYAKVGDMASARALFDEAPEKDVVAWSALISGYSRNEQPNEAVKIFF 288
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMY 302
EM V D+ +V+ +SAC+++G+ L KW+ SY+ + R+ +++ ALI M+
Sbjct: 289 EMVSMNVKPDEFIMVSLMSACSQLGNSDLAKWVDSYLSQTSIDTRQAHVLA---ALIDMH 345
Query: 303 ASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFL 347
A CG +E+A +F+ M R+ + S+I G + G EA+ + F
Sbjct: 346 AKCGNMEKAVKLFQDMPSRDLIPCCSLIQGLSIHGRGVEAVELFNRMLDEGLIPDTVAFT 405
Query: 348 GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM 407
+L+ACS GG +++G FF+ M + + P HY CMVDL SRAG + A+ L+++MP+
Sbjct: 406 VILTACSRGGLIEDGWHFFDTMKNKYSVVPSPNHYACMVDLLSRAGQLRAAYDLLKSMPL 465
Query: 408 KPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVA 467
KP+ G+LL C++H + EL +VA +L+ E++PE+A Y+ L++N+YA+A +W DV+
Sbjct: 466 KPHACAWGALLGACKLHGDVELREEVANRLL-ELEPEKAGSYV-LLSNIYASANQWLDVS 523
Query: 468 AVRQKMIKMGVRKPPGQSWV 487
VR +M + G+RK PG S++
Sbjct: 524 IVRDEMKERGIRKIPGCSYI 543
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 163/502 (32%), Positives = 271/502 (53%), Gaps = 44/502 (8%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
L++ YV G + A ++F++ WN M+ G+AR + +++ D D
Sbjct: 199 LMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYAR----RGDMVEARRLFDAAPVRD 254
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCS-----NVFIRTNLMNLYLMSGGECGV 172
+T++ ++S A+ G+ E +V + S +I+ +M+
Sbjct: 255 VFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDE---------- 304
Query: 173 GCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNG 232
A+ LF+ MP R+V SWN++L GY + G ++ A +FD MP ++ VSW M++ +Q G
Sbjct: 305 --AKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGG 362
Query: 233 KSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS-YVEENFSVGREPVL 291
S + L LF EM R +++ A LS CA+I L+ G +H + + VG
Sbjct: 363 CSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVG----- 417
Query: 292 VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------- 343
+ NAL+ MY CG +E+A F +M+ R+ VSW +MI G+A+ G+ +EAL
Sbjct: 418 CFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRT 477
Query: 344 -------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMD 396
+T +GVL+ACSH G V++G +F M+ ++G+ + EHY CM+DL RAG +
Sbjct: 478 TSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLA 537
Query: 397 EAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANV 456
EA L+++MP +P+ + G+LL RIH N EL A+K+ E++PE A Y+ L++N+
Sbjct: 538 EAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIF-ELEPENAGMYV-LLSNI 595
Query: 457 YAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEI 516
YA++ +W+D +R M + GV+K PG SW+++ +H F AGD + + IY L ++
Sbjct: 596 YASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDL 655
Query: 517 TMQAMQEGYKPDISELFLGIEE 538
M+ + GY + +EE
Sbjct: 656 DMRMKKAGYVSATDMVLHDVEE 677
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 157/348 (45%), Gaps = 57/348 (16%)
Query: 57 KLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEP 116
K + ++ +G + +A ++F ST+ +N M+ G++ + + L++ + P
Sbjct: 43 KAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAI----PRP 98
Query: 117 DEYTYSFLLSVCARC-------GLFRE---GEQVHGRVLASGYCSNVFIR---------- 156
D Y+Y+ LL A GLF E + V V+ S + ++ +
Sbjct: 99 DNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAP 158
Query: 157 -------TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKI 209
++ Y+ +G V AR LF+ V+SWN+L+ GYV+ G + A ++
Sbjct: 159 EKDAVSWNGMLAAYVRNGR---VEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEAREL 215
Query: 210 FDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDL 269
FD MP R+VVSW M+SG A+ G +A LF+ A D A +S A+ G L
Sbjct: 216 FDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD----AAPVRDVFTWTAVVSGYAQNGML 271
Query: 270 KLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSM 329
+ + + + E +V NA++ Y ++EA +F M RN SW +M
Sbjct: 272 EEARRVFDAMPERNAVSW--------NAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTM 323
Query: 330 ITGFAKQGYAQEALLTF-----------LGVLSACSHGGFVDEGRQFF 366
+TG+A+ G +EA F +L+A S GG +E Q F
Sbjct: 324 LTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLF 371
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 118/296 (39%), Gaps = 69/296 (23%)
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
V+ N + +++ G + A ++F MP R+ ++ M++G + NG+ A SLF + R
Sbjct: 38 VIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR 97
Query: 247 ARVGLDQVALVAALSACAEIGDLK---------------------LGKWIHSYVEENFSV 285
L+ AL+ + + D + + S F +
Sbjct: 98 PD-NYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDL 156
Query: 286 GREPVLVSLN------------------------------NALIHMYASCGEIEEAYGVF 315
E VS N NAL+ Y G++ EA +F
Sbjct: 157 APEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELF 216
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEA-----------LLTFLGVLSACSHGGFVDEGRQ 364
+M R+ VSW M++G+A++G EA + T+ V+S + G ++E R+
Sbjct: 217 DRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARR 276
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
F+ M + + + MV + + +MDEA L MP + N A ++L G
Sbjct: 277 VFDAMPERNAVS-----WNAMVAAYIQRRMMDEAKELFNMMPCR-NVASWNTMLTG 326
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
Q+H ++I G+ ++ LLA Y G + +A FE+ E WN MI G+AR
Sbjct: 403 MQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARH 462
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
++++ ++ M T+PD+ T +L+ C+ GL +G
Sbjct: 463 GFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKG 503
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 168/516 (32%), Positives = 262/516 (50%), Gaps = 55/516 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIHS + GF Y+ L+ Y G+L A +V E + W MI G+ + E
Sbjct: 366 QIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHE 425
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+ ++ +K+M PD + +S CA R+G Q+H R+ SGY +V I
Sbjct: 426 CCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSI-- 483
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
WN+L+ Y + G I A+ F+E+ H++
Sbjct: 484 --------------------------------WNALVNLYARCGRIREAFSSFEEIEHKD 511
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
++W ++SG AQ+G +AL +F M ++ V + V+ALSA A + ++K GK IH+
Sbjct: 512 EITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHA 571
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
V G + NALI +Y CG E+A F +M RN VSW ++IT ++ G
Sbjct: 572 RV---IKTG-HSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHG 627
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
EAL +TF+GVL+ACSH G V+EG +F+ M+ +GI+PR +HY
Sbjct: 628 RGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHY 687
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
C++D+F RAG +D A ++ MP+ + V +LL C++H N E+ A+ L+ E++
Sbjct: 688 ACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLL-ELE 746
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P +A Y+ L++N YA ++W + VR+ M GVRK PG+SW+++ V+H F GD
Sbjct: 747 PHDSASYV-LLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRL 805
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ A IY L I + + GYK + LF E+
Sbjct: 806 HPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQ 841
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 176/386 (45%), Gaps = 54/386 (13%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH++ + G + + L+ Y +G ++ A +VFE+ W M+ G+A++
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E+++ LY+QM P Y S +LS C + LF +G +H + G+CS +F+
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
++ LYL G A +F DMP R V++N+L+ G+ + G + A +IF+EM
Sbjct: 183 AVITLYLRCG---SFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEM---- 235
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
SG + D V + + L+ACA +GDL+ G +HS
Sbjct: 236 ------QFSGLSP---------------------DCVTISSLLAACASLGDLQKGTQLHS 268
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y+ F G + + +L+ +Y CG++E A +F R N V W M+ F +
Sbjct: 269 YL---FKAGISSDYI-MEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQIN 324
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
++ T+ +L C+ +D G Q ++ G + +
Sbjct: 325 DLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQ-IHSLSVKTGFESDMYVS 383
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMK 408
G ++D++S+ G +++A +++ + K
Sbjct: 384 GVLIDMYSKYGWLEKARRVLEMLKEK 409
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 142/304 (46%), Gaps = 40/304 (13%)
Query: 31 NTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMI 90
N + QIH++I ++G+S I L+ Y G + A FE+ E+ WN ++
Sbjct: 460 NAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLV 519
Query: 91 RGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYC 150
G A+S E+++ ++ +M + + +T+ LS A ++G+Q+H RV+ +G+
Sbjct: 520 SGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHS 579
Query: 151 SNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKI 209
+ L++LY G+CG A++ F +M R+ VSWN
Sbjct: 580 FETEVGNALISLY----GKCGSFEDAKMEFSEMSERNEVSWN------------------ 617
Query: 210 FDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDL 269
T+I+ C+Q+G+ +AL LF++M++ + + V + L+AC+ +G +
Sbjct: 618 -------------TIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLV 664
Query: 270 KLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTS 328
+ G + + + + P + +I ++ G+++ A +M + + W +
Sbjct: 665 EEGLSYFKSMSDEYGIRPRPDHYA---CVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRT 721
Query: 329 MITG 332
+++
Sbjct: 722 LLSA 725
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 86/216 (39%), Gaps = 29/216 (13%)
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
M R S ++G + + LSLF + R GL + AL AC G
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGR---- 56
Query: 273 KW-----IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
+W IH+ +G+ + + N LI +Y+ G + A VF ++ R+ VSW
Sbjct: 57 RWQVVPEIHAKAVTR-GLGKYRI---VGNLLIDLYSKNGLVLPARRVFEELSARDNVSWV 112
Query: 328 SMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQN 372
+M++G+A+ G +EAL VLS+C+ +GR
Sbjct: 113 AMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGR-LIHAQGYK 171
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
G I ++ L+ R G A + +MP +
Sbjct: 172 HGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHR 207
>gi|115468780|ref|NP_001057989.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|50725579|dbj|BAD33047.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113596029|dbj|BAF19903.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|125597760|gb|EAZ37540.1| hypothetical protein OsJ_21869 [Oryza sativa Japonica Group]
Length = 530
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 165/473 (34%), Positives = 258/473 (54%), Gaps = 36/473 (7%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
H+ + GF Y + L+ Y G + A KVF++ + + +WN M+R + R
Sbjct: 72 HAAAVKTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRCGWY 131
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVF----- 154
+V L +QM PD T ++ C+R G ++H Y NVF
Sbjct: 132 SAAVALSEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHV------YMDNVFGFNLP 185
Query: 155 IRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP 214
+ L+++Y + +C + A LF+ MPAR+++SW L+ GY G +D A +F++
Sbjct: 186 VANALLDMY--TKNDC-LEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCK 242
Query: 215 HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKW 274
++++ WT MI+ C Q+G +AL+LF +M+ RV D+ +V L+ CA +G L G+W
Sbjct: 243 EKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGALDQGEW 302
Query: 275 IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
IH Y E+ + + L ALI MY+ CG IE++ VF +MQ R+ +WT++I G A
Sbjct: 303 IHQYAEQR----KMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLA 358
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
G A AL +TF+GVLSAC HGG VDEGR+ F M + + I+PR+
Sbjct: 359 TNGQAGRALELFQDMQRSKVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIEPRV 418
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPM-KPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
EHY C+V+L RAGL+DEA L+ ++P+ K + G+LL C+ H N E++ ++ +++
Sbjct: 419 EHYSCLVNLLGRAGLLDEAERLIGDVPINKDAMPLFGALLTACKAHGNVEMSERLTKRIC 478
Query: 439 AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQING 491
+ Q L++NVYA A RW+DV VR KM V+K G S +++ G
Sbjct: 479 EQ--DSQITDVNLLMSNVYATASRWEDVIRVRGKMAHPTVKKNAGCSLIEVKG 529
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 160/346 (46%), Gaps = 53/346 (15%)
Query: 87 NQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLA 146
N +IR AR + + + +Y + + D +TY F+L L EG + H +
Sbjct: 18 NVLIRTLARRGSFARVMAVYYDLRARGLVADSFTYPFVLRAVGVLKLSVEGRKAHAAAVK 77
Query: 147 SGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGA 206
+G+ + + ++LM +Y M G V AR +FD+MP+R++V WN +++ Y++ G
Sbjct: 78 TGFRWDAYTGSSLMEMYTMLG---RVDIARKVFDEMPSRALVLWNMMVRCYIRCG----- 129
Query: 207 WKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEI 266
W + A++L +M R+ V D+V LV A++AC+
Sbjct: 130 --------------WYS------------AAVALSEQMERSGVTPDRVTLVTAVTACSRA 163
Query: 267 GDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSW 326
DL LG+ IH Y++ F + + NAL+ MY +EEA +F +M RN +SW
Sbjct: 164 RDLSLGRRIHVYMDNVFGFN-----LPVANALLDMYTKNDCLEEAVKLFEQMPARNIISW 218
Query: 327 TSMITGFAKQGYAQEA-----------LLTFLGVLSACSHGGFVDEGRQFFECMNQNWGI 375
T +++G+ G +A L+ + +++AC G +E F M Q +
Sbjct: 219 TILVSGYGLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDM-QMQRV 277
Query: 376 KPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPN--DAVLGSLLL 419
+P ++ + G +D+ + Q + DAVLG+ L+
Sbjct: 278 EPDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKMKIDAVLGTALI 323
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 163/502 (32%), Positives = 271/502 (53%), Gaps = 44/502 (8%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
L++ YV G + A ++F++ WN M+ G+AR + +++ D D
Sbjct: 199 LMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYAR----RGDMVEARRLFDAAPVRD 254
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCS-----NVFIRTNLMNLYLMSGGECGV 172
+T++ ++S A+ G+ E +V + S +I+ +M+
Sbjct: 255 VFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDE---------- 304
Query: 173 GCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNG 232
A+ LF+ MP R+V SWN++L GY + G ++ A +FD MP ++ VSW M++ +Q G
Sbjct: 305 --AKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGG 362
Query: 233 KSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS-YVEENFSVGREPVL 291
S + L LF EM R +++ A LS CA+I L+ G +H + + VG
Sbjct: 363 CSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVG----- 417
Query: 292 VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------- 343
+ NAL+ MY CG +E+A F +M+ R+ VSW +MI G+A+ G+ +EAL
Sbjct: 418 CFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRT 477
Query: 344 -------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMD 396
+T +GVL+ACSH G V++G +F M+ ++G+ + EHY CM+DL RAG +
Sbjct: 478 TSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLA 537
Query: 397 EAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANV 456
EA L+++MP +P+ + G+LL RIH N EL A+K+ E++PE A Y+ L++N+
Sbjct: 538 EAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIF-ELEPENAGMYV-LLSNI 595
Query: 457 YAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEI 516
YA++ +W+D +R M + GV+K PG SW+++ +H F AGD + + IY L ++
Sbjct: 596 YASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDL 655
Query: 517 TMQAMQEGYKPDISELFLGIEE 538
M+ + GY + +EE
Sbjct: 656 DMRMKKAGYVSATDMVLHDVEE 677
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 156/348 (44%), Gaps = 57/348 (16%)
Query: 57 KLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEP 116
K + ++ +G + +A ++F ST+ +N M+ G++ + + L++ + P
Sbjct: 43 KAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAI----PRP 98
Query: 117 DEYTYSFLLSVCARC-------GLFRE---GEQVHGRVLASGYCSNVFIR---------- 156
D Y+Y+ LL A GLF E + V V+ S + ++ +
Sbjct: 99 DNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAP 158
Query: 157 -------TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKI 209
++ Y+ +G V AR LF+ +SWN+L+ GYV+ G + A ++
Sbjct: 159 EKDAVSWNGMLAAYVRNGR---VEEARGLFNSRTEWDAISWNALMSGYVQWGKMSEAREL 215
Query: 210 FDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDL 269
FD MP R+VVSW M+SG A+ G +A LF+ A D A +S A+ G L
Sbjct: 216 FDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD----AAPVRDVFTWTAVVSGYAQNGML 271
Query: 270 KLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSM 329
+ + + + E +V NA++ Y ++EA +F M RN SW +M
Sbjct: 272 EEARRVFDAMPERNAVSW--------NAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTM 323
Query: 330 ITGFAKQGYAQEALLTF-----------LGVLSACSHGGFVDEGRQFF 366
+TG+A+ G +EA F +L+A S GG +E Q F
Sbjct: 324 LTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLF 371
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 118/296 (39%), Gaps = 69/296 (23%)
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
V+ N + +++ G + A ++F MP R+ ++ M++G + NG+ A SLF + R
Sbjct: 38 VIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR 97
Query: 247 ARVGLDQVALVAALSACAEIGDLK---------------------LGKWIHSYVEENFSV 285
L+ AL+ + + D + + S F +
Sbjct: 98 PD-NYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDL 156
Query: 286 GREPVLVSLN------------------------------NALIHMYASCGEIEEAYGVF 315
E VS N NAL+ Y G++ EA +F
Sbjct: 157 APEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKMSEARELF 216
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEA-----------LLTFLGVLSACSHGGFVDEGRQ 364
+M R+ VSW M++G+A++G EA + T+ V+S + G ++E R+
Sbjct: 217 DRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARR 276
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
F+ M + + + MV + + +MDEA L MP + N A ++L G
Sbjct: 277 VFDAMPERNAVS-----WNAMVAAYIQRRMMDEAKELFNMMPCR-NVASWNTMLTG 326
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
Q+H ++I G+ ++ LLA Y G + +A FE+ E WN MI G+AR
Sbjct: 403 MQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARH 462
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
++++ ++ M T+PD+ T +L+ C+ GL +G
Sbjct: 463 GFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKG 503
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 168/516 (32%), Positives = 262/516 (50%), Gaps = 55/516 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIHS + GF Y+ L+ Y G+L A +V E + W MI G+ + E
Sbjct: 366 QIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHE 425
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+ ++ +K+M PD + +S CA R+G Q+H R+ SGY +V I
Sbjct: 426 CCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSI-- 483
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
WN+L+ Y + G I A+ F+E+ H++
Sbjct: 484 --------------------------------WNALVNLYARCGRIREAFSSFEEIEHKD 511
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
++W ++SG AQ+G +AL +F M ++ V + V+ALSA A + ++K GK IH+
Sbjct: 512 EITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHA 571
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
V G + NALI +Y CG E+A F +M RN VSW ++IT ++ G
Sbjct: 572 RV---IKTG-HSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHG 627
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
EAL +TF+GVL+ACSH G V+EG +F+ M+ +GI+PR +HY
Sbjct: 628 RGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHY 687
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
C++D+F RAG +D A ++ MP+ + V +LL C++H N E+ A+ L+ E++
Sbjct: 688 ACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLL-ELE 746
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P +A Y+ L++N YA ++W + VR+ M GVRK PG+SW+++ V+H F GD
Sbjct: 747 PHDSASYV-LLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRL 805
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ A IY L I + + GYK + LF E+
Sbjct: 806 HPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQ 841
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 176/386 (45%), Gaps = 54/386 (13%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH++ + G + + L+ Y +G ++ A +VFE+ W M+ G+A++
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E+++ LY+QM P Y S +LS C + LF +G +H + G+CS +F+
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
++ LYL G A +F DMP R V++N+L+ G+ + G + A +IF+EM
Sbjct: 183 AVITLYLRCG---SFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEM---- 235
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
SG + D V + + L+ACA +GDL+ G +HS
Sbjct: 236 ------QFSGLSP---------------------DCVTISSLLAACASLGDLQKGTQLHS 268
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y+ F G + + +L+ +Y CG++E A +F R N V W M+ F +
Sbjct: 269 YL---FKAGISSDYI-MEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQIN 324
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
++ T+ +L C+ +D G Q ++ G + +
Sbjct: 325 DLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHS-LSVKTGFESDMYVS 383
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMK 408
G ++D++S+ G +++A +++ + K
Sbjct: 384 GVLIDMYSKYGWLEKARRVLEMLKEK 409
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 142/304 (46%), Gaps = 40/304 (13%)
Query: 31 NTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMI 90
N + QIH++I ++G+S I L+ Y G + A FE+ E+ WN ++
Sbjct: 460 NAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLV 519
Query: 91 RGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYC 150
G A+S E+++ ++ +M + + +T+ LS A ++G+Q+H RV+ +G+
Sbjct: 520 SGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHS 579
Query: 151 SNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKI 209
+ L++LY G+CG A++ F +M R+ VSWN
Sbjct: 580 FETEVGNALISLY----GKCGSFEDAKMEFSEMSERNEVSWN------------------ 617
Query: 210 FDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDL 269
T+I+ C+Q+G+ +AL LF++M++ + + V + L+AC+ +G +
Sbjct: 618 -------------TIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLV 664
Query: 270 KLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTS 328
+ G + + + + P + +I ++ G+++ A +M + + W +
Sbjct: 665 EEGLSYFKSMSDEYGIRPRPDHYA---CVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRT 721
Query: 329 MITG 332
+++
Sbjct: 722 LLSA 725
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 86/216 (39%), Gaps = 29/216 (13%)
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
M R S ++G + + LSLF + R GL + AL AC G
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGR---- 56
Query: 273 KW-----IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
+W IH+ +G+ + + N LI +Y+ G + A VF ++ R+ VSW
Sbjct: 57 RWQVVPEIHAKAVTR-GLGKYRI---VGNLLIDLYSKNGLVLPARRVFEELSARDNVSWV 112
Query: 328 SMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQN 372
+M++G+A+ G +EAL VLS+C+ +GR
Sbjct: 113 AMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGR-LIHAQGYK 171
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
G I ++ L+ R G A + +MP +
Sbjct: 172 HGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHR 207
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 165/521 (31%), Positives = 262/521 (50%), Gaps = 30/521 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H I G ++ L+ Y + A +VF+ W M +
Sbjct: 153 EVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNCG 212
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
P + ++ +M +P+ T S +L C+ + G +HG + G NVF+ +
Sbjct: 213 LPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCS 272
Query: 158 NLMNLYLMSGGEC-GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L++LY C V ARL+FD MP R VVSWN +L Y + D +F +M +
Sbjct: 273 ALVSLY----ARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSK 328
Query: 217 NV----VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
V +W +I GC +NG++ +A+ + +M+ +Q+ + + L AC+ + L++G
Sbjct: 329 GVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMG 388
Query: 273 KWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
K +H YV ++ +G ++ AL++MYA CG++ + VF + R++ V+W +MI
Sbjct: 389 KEVHCYVFRHWLIGD----LTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIA 444
Query: 333 FAKQGYAQEALL---------------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
A G +E LL TF GVLS CSH V+EG Q F M ++ ++P
Sbjct: 445 NAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEP 504
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
HY CMVD+FSRAG + EA+ +Q MPM+P + G+LL CR++ N ELA A KL
Sbjct: 505 DANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISANKL 564
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
EI+P Y++L N+ AK W + + R M + G+ K PG SW+Q+ +H FV
Sbjct: 565 F-EIEPNNPGNYVSLF-NILVTAKLWSEASEARILMKERGITKTPGCSWLQVGDRVHTFV 622
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
GD ++ IY L E+ + GYKPD + I++
Sbjct: 623 VGDKNNMESDKIYNFLDELGEKMKSAGYKPDTDYVLQDIDQ 663
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 4/154 (2%)
Query: 193 LLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLD 252
LLK + GD A ++FD +P + + +T+IS G +A+ L+ +R +
Sbjct: 72 LLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPH 131
Query: 253 QVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAY 312
+ AC GD K +H ++ G L NALIH Y C +E A
Sbjct: 132 NSVFLTVAKACGASGDASRVKEVH---DDAIRCGMMSDAF-LGNALIHAYGKCKCVEGAR 187
Query: 313 GVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
VF + ++ VSWTSM + + G + L F
Sbjct: 188 RVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVF 221
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 170/504 (33%), Positives = 260/504 (51%), Gaps = 55/504 (10%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H+Q + G + L+ Y+ G + A +VF+K + W MIRG+A +
Sbjct: 285 VHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSN 344
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
E + L+ M ++ +PD TY +++ CA ++H +V+ +G+ +++ + T
Sbjct: 345 IEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTA 404
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
L+++Y K G I A ++FD M R+V
Sbjct: 405 LVHMY----------------------------------AKCGAIKDARQVFDAMSRRDV 430
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
VSW+ MI +NG +A F+ M+R V D V + L+AC +G L LG I++
Sbjct: 431 VSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQ 490
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ V PV NALI+M G IE A +F M +R+ V+W MI G++ G
Sbjct: 491 AIKADLVSHIPV----GNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGN 546
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
A+EAL +TF+GVLSACS GFV+EGR+FF + GI P +E YG
Sbjct: 547 AREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYG 606
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
CMVDL RAG +DEA L+ MP+KPN ++ +LL CRI+ N ++A + A++ + +P
Sbjct: 607 CMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMS-EP 665
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
A Y+ L +++YAAA W++VA VR+ M GVRK G +W+++ G LH FV D ++
Sbjct: 666 YDGAVYVQL-SHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSH 724
Query: 504 KQASLIYKTLGEITMQAMQEGYKP 527
QA IY L + +EGY P
Sbjct: 725 PQAGEIYAELARLMTAIKREGYIP 748
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 183/404 (45%), Gaps = 58/404 (14%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+ II +G Y L L+ + G ++ A + F+ EN + WN +I G+A+
Sbjct: 82 QVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLG 141
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ L++QM+D+ EP T+ +L C+ + G++ H +V+ G+ S+ I T
Sbjct: 142 HVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGT 201
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y+ G G AR +FD + R V ++N ++ GY K GD + A+++F M
Sbjct: 202 ALVSMYVKGGSMDG---ARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEG 258
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
++++ ++ L C+ L GK +H+
Sbjct: 259 FKP-------------------------------NRISFLSILDGCSTPEALAWGKAVHA 287
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
V V + ALI MY CG IE A VF KM+ R+ VSWT MI G+A+
Sbjct: 288 QCMNTGLVDD----VRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENS 343
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFF-ECMNQNWGIKPRIEH 381
++A +T++ +++AC+ + R+ + + +G ++
Sbjct: 344 NIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVD- 402
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHN 425
+V ++++ G + +A + M + D V S ++G + N
Sbjct: 403 -TALVHMYAKCGAIKDARQVFDAMSRR--DVVSWSAMIGAYVEN 443
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 131/316 (41%), Gaps = 72/316 (22%)
Query: 117 DEYTYSFLLSVCARCGLFRE---GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVG 173
D TY L RC + R+ G+QV ++ SG N++ L+ L+ + G
Sbjct: 60 DSRTYVKLFQ---RCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLE-- 114
Query: 174 CARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGK 233
AR FD + ++VV+WN+++ GY AQ G
Sbjct: 115 -ARQTFDSVENKTVVTWNAIIAGY-------------------------------AQLGH 142
Query: 234 SRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE-----NFSVGRE 288
++A +LF +M + + + L AC+ LKLGK H+ V + +F +G
Sbjct: 143 VKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIG-- 200
Query: 289 PVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----- 343
AL+ MY G ++ A VF + +R+ ++ MI G+AK G ++A
Sbjct: 201 -------TALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYR 253
Query: 344 ----------LTFLGVLSACSHGGFVDEGRQFF-ECMNQNWGIKPRIEHYGCMVDLFSRA 392
++FL +L CS + G+ +CMN G+ + ++ ++
Sbjct: 254 MQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNT--GLVDDVRVATALIRMYMGC 311
Query: 393 GLMDEAFSLVQNMPMK 408
G ++ A + M ++
Sbjct: 312 GSIEGARRVFDKMKVR 327
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 166/543 (30%), Positives = 293/543 (53%), Gaps = 38/543 (6%)
Query: 20 TRQIFSLLQIRNTTKTLF----QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVF 75
R FS + I ++ + QIH QI G+ ++ + L+ Y +G++ +A+++F
Sbjct: 137 NRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIF 196
Query: 76 EKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFR 135
E+ + ++N MI G R + + +Q+ D E D +++ +++ + GLF+
Sbjct: 197 EEIPEKNIVVYNTMITGLLRC----RFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFK 252
Query: 136 EGEQVHGRVLASGYCSNVFIRTNLMN-----LYLMSGGECGVGCARLLFDDMPARSVVSW 190
E + G+C + F +++ L L G + R + D ++
Sbjct: 253 EAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQD----NIFVG 308
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG 250
++LL Y K ++ A +F +M H+NV+SWT M+ G QNG S +A+ +F +M+R +
Sbjct: 309 SALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIH 368
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEE 310
D L + +S+CA + L+ G H + + V+++NALI +Y CG +E
Sbjct: 369 PDDFTLGSVISSCANLASLEEGAQFHGQALASGLI----CFVTVSNALITLYGKCGSLEH 424
Query: 311 AYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSH 355
A+ +F +M+ R+ VSWT++++G+A+ G A E + +TF+GVLSACS
Sbjct: 425 AHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSR 484
Query: 356 GGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLG 415
G V++G +FECM + I P +HY CM+DL SRAG ++EA + + MP P+
Sbjct: 485 AGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWA 544
Query: 416 SLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIK 475
+LL CR++ N E+ A+ L +++P+ A Y+ L++++YAA +W DVA +R+ M +
Sbjct: 545 TLLSSCRLNGNLEIGKWAAESL-HKLEPQNPASYI-LLSSIYAAKGKWDDVAKLRKGMRE 602
Query: 476 MGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLG 535
MGV+K PG SW++ +H F A D + + IY L + ++ ++EGY PD+S +
Sbjct: 603 MGVKKEPGHSWIKYKNKVHIFSADDRSSPFSDQIYAKLESLYLKMIEEGYVPDMSFVLHD 662
Query: 536 IEE 538
+E+
Sbjct: 663 VEK 665
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 214/416 (51%), Gaps = 36/416 (8%)
Query: 16 KALTTRQIFSLLQIRNTTKTLFQI-HSQIIINGFSQKN-YILAKLLAFYVTSGYLINAHK 73
+ LT + F + NT L + +++ + + Q N + LL+ Y GYL + +
Sbjct: 33 RTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYSKLGYLQDMQR 92
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMI-DKETEPDEYTYSFLLSVCARCG 132
VF+ N WN ++ G+A + +SV +Y M+ D + T+S +L + + G
Sbjct: 93 VFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRG 152
Query: 133 LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNS 192
G Q+HG++ GY S +F+ + L+++Y +G + A +F+++P +++V +N+
Sbjct: 153 FVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTG---FINDANRIFEEIPEKNIVVYNT 209
Query: 193 LLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLD 252
++ G ++ I A ++FD MP ++ +SWTT+I+G QNG ++A+ F EM +D
Sbjct: 210 MITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMD 269
Query: 253 QVALVAALSACAEIGDLKLGKWIHSYV-----EENFSVGREPVLVSLNNALIHMYASCGE 307
Q + L+AC L GK IH+Y+ ++N VG +AL+ MY C
Sbjct: 270 QFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVG---------SALLDMYCKCRN 320
Query: 308 IEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF--------------LG-VLSA 352
++ A VFRKM+ +N +SWT+M+ G+ + GY++EA+ F LG V+S+
Sbjct: 321 VKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISS 380
Query: 353 CSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
C++ ++EG Q F G+ + ++ L+ + G ++ A L M ++
Sbjct: 381 CANLASLEEGAQ-FHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIR 435
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 174/394 (44%), Gaps = 98/394 (24%)
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLF 179
Y+ L C + +++H R++ + F+ NL+N Y G+ G + AR +F
Sbjct: 8 YTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTY----GKLGDLKNARNVF 63
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
D +P ++ SWN+LL Y K G + ++FD MP+ +VVSW +++SG A NG +++
Sbjct: 64 DHIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVR 123
Query: 240 LFNEM-RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNAL 298
++N M + V L+++ L + G + LG+ IH + F G + L + + L
Sbjct: 124 VYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQI---FKFGYQSYLF-VGSPL 179
Query: 299 IHMYASCGEIEEAYGVFRK-------------------------------MQRRNTVSWT 327
+ MYA G I +A +F + M ++++SWT
Sbjct: 180 VDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWT 239
Query: 328 SMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGF--VDEGRQ------ 364
++ITG + G +EA+ TF VL+AC GGF +DEG+Q
Sbjct: 240 TIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTAC--GGFLALDEGKQIHAYII 297
Query: 365 -----------------FFECMNQNW--GIKPRIEH-----YGCMVDLFSRAGLMDEA-- 398
+ +C N + + ++ H + M+ + + G +EA
Sbjct: 298 RTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVR 357
Query: 399 -FSLVQNMPMKPNDAVLGSLLLGCRIHNNAELAS 431
F +Q + P+D LGS++ C A LAS
Sbjct: 358 IFCDMQRNEIHPDDFTLGSVISSC-----ANLAS 386
>gi|115480595|ref|NP_001063891.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|113632124|dbj|BAF25805.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|125606583|gb|EAZ45619.1| hypothetical protein OsJ_30287 [Oryza sativa Japonica Group]
Length = 644
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 157/472 (33%), Positives = 268/472 (56%), Gaps = 26/472 (5%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
H ++ GF + ++ LL Y ++G L ++ + F++ + + WN MI G+A++
Sbjct: 133 HGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQAGNT 192
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
++ L++ M + DE+T LL C+ G G+ VH +L G ++ + L
Sbjct: 193 REACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANAL 252
Query: 160 MNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
+++Y G+CG + A FD MP ++ VSW S+L KR ID A F+++P +++
Sbjct: 253 VDMY----GKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSI 308
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
+SW MIS Q G+ +AL L+N M+ + D+ L A LSAC ++GDL GK IH
Sbjct: 309 ISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDC 368
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ +NF P V+L N+L+ MYA CG+++ A +F +M +N +SW ++I A G
Sbjct: 369 IRDNF---HNPG-VALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGR 424
Query: 339 AQEALL---------------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
AQ+AL+ TF+ +LSAC+HGG ++ G+ +F+ M + +KP +EHY
Sbjct: 425 AQDALMFFRSMVFDAFPPDEITFVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEHYA 484
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
CMVDL R G + +A L+++MPM+P+ V G+LL CRIH + ++ QV ++L+ E++
Sbjct: 485 CMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGHIQIGKQVIKQLL-ELE- 542
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHD 495
+ G L++N+ +W+D+ +R+ M + G++K G S ++ N +H+
Sbjct: 543 GMSGGLFVLISNMLYETHQWEDMKRLRKLMREWGMKKNMGVSSIETNSNIHE 594
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 135/494 (27%), Positives = 227/494 (45%), Gaps = 98/494 (19%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVT---SGYLI 69
++ A + R + LL+ + L Q+H+ ++++G + +++LA Y G +
Sbjct: 5 SAGGASSARHVRELLRRCGSVHRLNQLHAHLVVHGVDD---VTSQILASYCALPAGGGVW 61
Query: 70 NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
A ++F++ +P ++N +IR + S P++++ L + MI + P+E+T FLL CA
Sbjct: 62 YARQLFDRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACA 121
Query: 130 RCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVS 189
R + HG V+ G+ VF+ L++ Y +G +G +R FD+M R+VVS
Sbjct: 122 RVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAG---SLGDSRRFFDEMVDRNVVS 178
Query: 190 WNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARV 249
WNS++ GY AQ G +R+A SLF MRR +
Sbjct: 179 WNSMINGY-------------------------------AQAGNTREACSLFEGMRRQGL 207
Query: 250 GLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIE 309
D+ LV+ L AC+ G+L+ GK +HS++ G L+ L NAL+ MY CG++
Sbjct: 208 LADEFTLVSLLFACSAEGNLEFGKLVHSHL---LVRGCRIDLI-LANALVDMYGKCGDLL 263
Query: 310 EAYGVFRKMQRRNTVSWTSMITGFAKQ-------------------------------GY 338
A+ F M +N VSWTSM+ AK+ G
Sbjct: 264 MAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGR 323
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
EAL T VLSAC G + G+ +C+ N+ P + +
Sbjct: 324 FHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFH-NPGVALFN 382
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPN---DAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
++D+++R G +D A SL MP K +A++G+L + H A+ A + +V +
Sbjct: 383 SLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAM----HGRAQDALMFFRSMVFD 438
Query: 441 IDPEQAAGYLALVA 454
P ++AL++
Sbjct: 439 AFPPDEITFVALLS 452
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 68/167 (40%), Gaps = 5/167 (2%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
IH I N + + LL Y G + A +F + + + WN +I A
Sbjct: 365 IHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGR 424
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
+ ++ ++ M+ PDE T+ LLS C GL G Q + + + Y +
Sbjct: 425 AQDALMFFRSMVFDAFPPDEITFVALLSACNHGGLLEAG-QYYFQAMRHVYNVKPGVEHY 483
Query: 159 LMNLYLMS-GGECGVGCARLLFDDMPAR-SVVSWNSLLKGYVKRGDI 203
+ L+ GG+ + A L DMP R VV W +LL G I
Sbjct: 484 ACMVDLLGRGGQ--LAKAVDLIKDMPMRPDVVVWGALLGACRIHGHI 528
>gi|449441061|ref|XP_004138302.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
gi|449477575|ref|XP_004155061.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 167/479 (34%), Positives = 271/479 (56%), Gaps = 59/479 (12%)
Query: 31 NTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKTENPSTAIWNQ 88
+T K L Q+H+ II GF Q +++ KL+ F S G + A VF++ EN +WN
Sbjct: 66 STLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADGFLWNT 125
Query: 89 MIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASG 148
MIRG R+ + YK+M++K D +T+SFLL + + G G+Q+H +L G
Sbjct: 126 MIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLGKQLHVNILKLG 185
Query: 149 YCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWK 208
S+V++R L+++Y G V AR LFD++P +V+WN+++ +V
Sbjct: 186 LDSHVYVRNTLIHMY---GRLKDVNIARNLFDELPKTDLVAWNAVIDCHVS--------- 233
Query: 209 IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGD 268
C G +AL LF +M ++ V D+ LV +SAC+ +G
Sbjct: 234 -------------------C---GMYNEALDLFVQMLQSGVEPDEATLVVTISACSALGA 271
Query: 269 LKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTS 328
L G+W+HS+V N G+ +++ N+LI MYA CG +E A +F + +N V+W +
Sbjct: 272 LDCGRWVHSHVNSN-DRGKT---IAVFNSLIDMYAKCGAVEYAREMFNAVSGKNIVTWNT 327
Query: 329 MITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFECMNQN 372
MI G A G A++AL +TFL VL AC++GG V+EGR++F+ M ++
Sbjct: 328 MIMGLATHGDAEDALTLFSNMLAERVETPDGVTFLAVLCACNYGGKVEEGRRYFDLMTKH 387
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQ 432
+ I+P ++HYG MVD+ RAG ++EA+ L+++MPM+ N + +LL C++H N EL +
Sbjct: 388 FNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMPMECNAVIWRTLLAACQMHGNVELGER 447
Query: 433 VAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKP-PGQSWVQIN 490
V+ V EI + ++ Y+ L+AN+YA++ +W ++ R+ M + GV KP PG S+++IN
Sbjct: 448 VSSH-VLEIVADHSSDYV-LLANMYASSGQWNEMIKTRKSMHRKGVEKPEPGNSYLEIN 504
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 145/352 (41%), Gaps = 57/352 (16%)
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
E + FL +C ++ Q+H ++ G+ N+F+ L++ C V
Sbjct: 55 EQKFMFLFK---QCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDF-------CAVS---- 100
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
GD++ A +FD + + + W TMI G +N K A
Sbjct: 101 ---------------------DHGDMNYAVVVFDRIENADGFLWNTMIRGFGRNRKLLMA 139
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
+ M + D L ++G + LGK +H + +G + V + N
Sbjct: 140 FEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLGKQLHVNI---LKLGLDS-HVYVRNT 195
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVL------- 350
LIHMY ++ A +F ++ + + V+W ++I G EAL F+ +L
Sbjct: 196 LIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEALDLFVQMLQSGVEPD 255
Query: 351 --------SACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
SACS G +D GR +N N K I + ++D++++ G ++ A +
Sbjct: 256 EATLVVTISACSALGALDCGRWVHSHVNSNDRGKT-IAVFNSLIDMYAKCGAVEYAREMF 314
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE-IDPEQAAGYLALV 453
+ K N ++++G H +AE A + ++AE ++ +LA++
Sbjct: 315 NAVSGK-NIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVTFLAVL 365
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 169/517 (32%), Positives = 269/517 (52%), Gaps = 58/517 (11%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H + F + LL Y L+ A K+F+ + W+ MI G+ S+
Sbjct: 232 LHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDC 291
Query: 99 PEKSVYLYKQMIDKET-EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++++ L+ QMI K+ +P T +L CA+ G ++H ++ G ++ +
Sbjct: 292 MKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLG- 350
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
N+LL Y K G ID A + FDEM ++
Sbjct: 351 ---------------------------------NTLLSMYAKCGVIDDAIRFFDEMNPKD 377
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VS++ ++SGC QNG + ALS+F M+ + + D ++ L AC+ + L+ G H
Sbjct: 378 SVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHG 437
Query: 278 Y-VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
Y + F+ + NALI MY+ CG+I A VF +M R + VSW +MI G+
Sbjct: 438 YLIVRGFATD-----TLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIH 492
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G EAL +TF+ +LS+CSH G V EGR +F+ M++++ I PR+EH
Sbjct: 493 GLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEH 552
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
CMVD+ RAGL+DEA ++NMP +P+ + +LL CRIH N EL +V++K + +
Sbjct: 553 CICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKK-IQSL 611
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
PE + G L++N+Y+AA RW D A +R G++K PG SW++ING++H FV GD
Sbjct: 612 GPE-STGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQ 670
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++ Q S I + L E+ ++ + GY+ + S +F +EE
Sbjct: 671 SHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEE 707
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 197/443 (44%), Gaps = 63/443 (14%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH + N + + +L KL Y++ ++ A ++F++ NPS +WNQ+IR +A +
Sbjct: 29 KIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNG 88
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+ ++ LY M+ P++YTY F+L C+ +G ++H G S+VF+ T
Sbjct: 89 PFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCT 148
Query: 158 NLMNLYLMSGGECGVGC-ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L++ Y +CG+ A+ LF M R VV+WN+
Sbjct: 149 ALVDFY----AKCGILVEAQRLFSSMSHRDVVAWNA------------------------ 180
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
MI+GC+ G A+ L +M+ + + +V L E L GK +H
Sbjct: 181 -------MIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALH 233
Query: 277 SY-VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
Y V +F G V + L+ MYA C + A +F M RN VSW++MI G+
Sbjct: 234 GYCVRRSFDNG-----VVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVA 288
Query: 336 QGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
+EAL +T VL AC+ + GR+ C G I
Sbjct: 289 SDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRK-LHCYIIKLGSVLDI 347
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAV-LGSLLLGCRIHNNAELASQVAQKL- 437
++ ++++ G++D+A M P D+V +++ GC + NA +A + + +
Sbjct: 348 LLGNTLLSMYAKCGVIDDAIRFFDE--MNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQ 405
Query: 438 VAEIDPEQAAGYLALVANVYAAA 460
++ IDP+ L A + AA
Sbjct: 406 LSGIDPDLTTMLGVLPACSHLAA 428
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 152/341 (44%), Gaps = 54/341 (15%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IHS + G ++ L+ FY G L+ A ++F + WN MI G +
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYG 189
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+ +V L QM ++ P+ T +L G+ +HG + + + V + T
Sbjct: 190 LCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGT 249
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y C LL+ A KIFD M RN
Sbjct: 250 GLLDMY--------AKCQCLLY--------------------------ARKIFDVMGVRN 275
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEM-RRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
VSW+ MI G + ++AL LF++M + + V L + L ACA++ DL G+ +H
Sbjct: 276 EVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLH 335
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
Y+ + SV + + L N L+ MYA CG I++A F +M +++VS++++++G +
Sbjct: 336 CYIIKLGSV----LDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQN 391
Query: 337 GYAQEA---------------LLTFLGVLSACSHGGFVDEG 362
G A A L T LGVL ACSH + G
Sbjct: 392 GNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHG 432
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/335 (19%), Positives = 137/335 (40%), Gaps = 48/335 (14%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
M++++ + P T L R L + K +H II G + LL+
Sbjct: 302 MILKDAMDPTPVTLGSVL--RACAKLTDLSRGRK----LHCYIIKLGSVLDILLGNTLLS 355
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y G + +A + F++ + ++ ++ G ++ ++ +++ M +PD T
Sbjct: 356 MYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTT 415
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLF 179
+L C+ + G HG ++ G+ ++ I L+++Y +CG + AR +F
Sbjct: 416 MLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMY----SKCGKISFAREVF 471
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
+ M +VSWN+++ GY +G +AL
Sbjct: 472 NRMDRHDIVSWNAMIIGY-------------------------------GIHGLGMEALG 500
Query: 240 LFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFS-VGREPVLVSLNNAL 298
LF+++ + D + + LS+C+ G + G+ + +FS V R + +
Sbjct: 501 LFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCI----CM 556
Query: 299 IHMYASCGEIEEAYGVFRKMQRRNTVS-WTSMITG 332
+ + G I+EA+ R M V W+++++
Sbjct: 557 VDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSA 591
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 85/196 (43%), Gaps = 21/196 (10%)
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
L AC + L K IH + +N S VL + L +Y SC ++ A +F ++
Sbjct: 15 LEACIQSKSLTEAKKIHQHFLKNTSNADSSVL----HKLTRLYLSCNQVVLARRLFDEIP 70
Query: 320 RRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQ 364
+ + W +I +A G A+ T+ VL ACS +++G +
Sbjct: 71 NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
+ +G++ + +VD +++ G++ EA L +M + + +++ GC ++
Sbjct: 131 IHS-HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGCSLY 188
Query: 425 NNAELASQVAQKLVAE 440
+ A Q+ ++ E
Sbjct: 189 GLCDDAVQLIMQMQEE 204
>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 172/556 (30%), Positives = 286/556 (51%), Gaps = 64/556 (11%)
Query: 8 PANPATSSKAL--TTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS 65
P+ P S A + LL +T +L Q + ++ +G + +L +L A ++
Sbjct: 8 PSAPRLSPSAARAAEQHCLRLLAASSTPTSLLQSVAFLLKSGLHANSLVLTRLFAASASA 67
Query: 66 GYLINAHKVFEKTENPSTAI----WNQMIRGHARSETPE---KSVYLYKQMIDKETEPDE 118
+ + PS + N +IR HA S ++ + M+ P++
Sbjct: 68 APAL-LDPLVAALLRPSVPLDAFLANTLIRAHATSPIHSLRLRAAAFFPLMLRGAVVPNK 126
Query: 119 YTYSFLLSVCARC-GLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
+T+ FLL CA G G Q H L G+ ++ ++ L+++Y GG
Sbjct: 127 FTFPFLLKACAALPGSPDVGLQAHAAALKFGFATDQYVSNTLIHMYSCFGG--------- 177
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
G + A +FD MP + V+W+ MI G + G S A
Sbjct: 178 -----------------------GFLGDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDA 214
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
+ LF EM+ V D+V ++ L+A ++G L+L +W+ +VE +G+ V+L NA
Sbjct: 215 VELFREMQANGVQADEVTVIGVLAAATDLGALELARWVRRFVERE-GIGKS---VTLCNA 270
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------------- 343
LI A CG+++ A VF MQ+R+ VSWTS+I A +G +EA+
Sbjct: 271 LIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPD 330
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
+ F+GVL+ACSH G VDEG +F+ M +GI+P+IEHYGCMVD+F RAG+++ A V
Sbjct: 331 DVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFV 390
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKR 462
+ MP++PN + SL+ CR H EL + + L+ E P A Y+ +++NV+A +R
Sbjct: 391 RTMPIQPNPVIWRSLVSACRAHGRLELGESITRSLLHEY-PAHEANYI-MLSNVFALTQR 448
Query: 463 WQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQ 522
W++ + +R++M K G++K PG S V+++G +H+F+AGD ++ Q IY+ + E+ + +
Sbjct: 449 WKEKSEIRREMSKRGIKKVPGCSIVELDGEVHEFIAGDESHPQYKDIYRMVEEMARELRR 508
Query: 523 EGYKPDISELFLGIEE 538
G+ SE+ L ++E
Sbjct: 509 VGHIAATSEVLLDLDE 524
>gi|414883627|tpg|DAA59641.1| TPA: hypothetical protein ZEAMMB73_113196 [Zea mays]
Length = 637
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 162/421 (38%), Positives = 245/421 (58%), Gaps = 29/421 (6%)
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMP-ARSVVSWNSLL 194
G VH + +G ++++R ++ Y G CG V R +FD++P R VV+WN++L
Sbjct: 151 GTHVHALAVKAGAAGDLYVRNAQIHFY----GVCGDVAAMRKVFDELPIVRDVVTWNAVL 206
Query: 195 KGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQV 254
GYV+ G + A ++FD MP R+ VSW+T+I G + G+ AL +F M V ++
Sbjct: 207 AGYVRAGMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNMVAQGVKANEA 266
Query: 255 ALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGV 314
A+V ALSA A++G L+ GK++H V+ VG + V+L ALI MY+ CG + A V
Sbjct: 267 AIVTALSAAAQLGLLEQGKFVHEVVKR---VGMT-MSVNLGAALIDMYSKCGSVAAAKEV 322
Query: 315 FRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFV 359
F M RR+ +W SMI G A G +A+ +TF+GVL+ACS G V
Sbjct: 323 FDAMPRRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLNACSRTGLV 382
Query: 360 DEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLL 419
DEGR++F+ M + + I+ +EHYGCMVDL SRAGL+ EA L++ M + P+ + G++L
Sbjct: 383 DEGRRYFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPPDPVLWGTILS 442
Query: 420 GCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVR 479
C+ H +L V KL+ E+DP GY L+A++YA AK+W +V VR+ M G
Sbjct: 443 ACKRHGLVDLGITVGNKLI-ELDPAH-DGYYVLLASIYAKAKKWDEVRKVRKLMSNRGTS 500
Query: 480 KPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELF--LGIE 537
K G S ++ +G++H F+ GD +K ++ IY L I + + GY PD+S + +G E
Sbjct: 501 KSAGWSLMEAHGIVHKFLVGDMNHKDSARIYNMLCTINRRLAEAGYVPDVSSVLHDIGDE 560
Query: 538 E 538
E
Sbjct: 561 E 561
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 40/282 (14%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
+LA YV +G + A +VF+ W+ +I G+ + PE ++ ++K M+ + + +
Sbjct: 205 VLAGYVRAGMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNMVAQGVKAN 264
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCAR 176
E LS A+ GL +G+ VH V G +V + L+++Y +CG V A+
Sbjct: 265 EAAIVTALSAAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMY----SKCGSVAAAK 320
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
+FD MP R V +WNS MI G A +G
Sbjct: 321 EVFDAMPRRDVFAWNS-------------------------------MICGLATHGLGHD 349
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
A+ LF + + V L+AC+ G + G+ + E + + E +
Sbjct: 350 AVQLFEKFVSEGFCPTSITFVGVLNACSRTGLVDEGRRYFKLMAEKYDIESE---MEHYG 406
Query: 297 ALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQG 337
++ + + G ++EA + M+ + V W ++++ + G
Sbjct: 407 CMVDLLSRAGLVQEAVELIEGMRIPPDPVLWGTILSACKRHG 448
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 6/138 (4%)
Query: 2 LVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAF 61
+V + + AN A AL+ LL+ + F +H + G + + A L+
Sbjct: 256 MVAQGVKANEAAIVTALSAAAQLGLLE-----QGKF-VHEVVKRVGMTMSVNLGAALIDM 309
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
Y G + A +VF+ WN MI G A +V L+++ + + P T+
Sbjct: 310 YSKCGSVAAAKEVFDAMPRRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITF 369
Query: 122 SFLLSVCARCGLFREGEQ 139
+L+ C+R GL EG +
Sbjct: 370 VGVLNACSRTGLVDEGRR 387
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 169/518 (32%), Positives = 275/518 (53%), Gaps = 62/518 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH ++I +GF ++I + L+ Y G+L A ++FE+ + WN MI G+
Sbjct: 228 EIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKG 287
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+ L+K+M ++ +P T S L+ VC+R EG+ VHG + + +VF+ +
Sbjct: 288 DIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNS 347
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
+LM+LY +CG V A +F +P VVSWN ++ GYV G + A +F E
Sbjct: 348 SLMDLYF----KCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSE---- 399
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
MR++ V D + + L+AC+++ L+ GK IH
Sbjct: 400 ---------------------------MRKSYVESDAITFTSVLTACSQLAALEKGKEIH 432
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+ + E E V+ AL+ MYA CG ++EA+ VF+ + +R+ VSWTSMIT +
Sbjct: 433 NLIIEKKLDNNEVVM----GALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSH 488
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G+A AL + FL +LSAC H G VDEG +F M +GI PR+EH
Sbjct: 489 GHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRVEH 548
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDA-VLGSLLLGCRIHNNAELASQVAQKLVAE 440
Y C++DL RAG + EA+ ++Q P +D +L +L CR+H N +L +++A+ L+ +
Sbjct: 549 YSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDK 608
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
DP+ ++ Y+ L++N+YA+A +W +V VR KM ++G++K PG SW++IN + F D
Sbjct: 609 -DPDDSSTYI-LLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVED 666
Query: 501 STYKQASLIYKTLGEITMQAMQEG----YKPDISELFL 534
+++ L++K L ++ E Y D+ L L
Sbjct: 667 NSHLHLELVFKCLSYLSDHMEDESKSFTYHLDVETLRL 704
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 185/403 (45%), Gaps = 70/403 (17%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQ---IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKV 74
+ TR++ LL+ +K+L Q IH +++ G ++ L+ Y++ +A V
Sbjct: 1 MDTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCV 60
Query: 75 FEKTENP-STAIWNQMIRGHARSETPEKSVYLYKQMIDKE-TEPDEYTYSFLLSVCARCG 132
F+ ENP ++WN ++ G+ ++ +++ L+++++ +PD YTY + C
Sbjct: 61 FDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLH 120
Query: 133 LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNS 192
+ G+ +H ++ +G ++ + ++L+ +Y G+C
Sbjct: 121 RYVLGKMIHTCLIKTGLMMDIVVGSSLVGMY----GKCNA-------------------- 156
Query: 193 LLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLD 252
+ A +F+EMP ++V W T+IS Q+G + AL F MRR +
Sbjct: 157 ----------FEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPN 206
Query: 253 QVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVS-LNNALIHMYASCGEIEEA 311
V + A+S+CA + DL G IH EE + G +L S +++AL+ MY CG +E A
Sbjct: 207 SVTITTAISSCARLLDLNRGMEIH---EELINSGF--LLDSFISSALVDMYGKCGHLEMA 261
Query: 312 YGVFRKMQRRNTVSWTSMITGFAKQGY---------------AQEALLTFLGVLSACSHG 356
+F +M ++ V+W SMI+G+ +G + L T ++ CS
Sbjct: 262 IEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRS 321
Query: 357 GFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAF 399
+ EG+ + I+ RI+ D+F + LMD F
Sbjct: 322 ARLLEGK-----FVHGYTIRNRIQP-----DVFVNSSLMDLYF 354
>gi|224141027|ref|XP_002323876.1| predicted protein [Populus trichocarpa]
gi|222866878|gb|EEF04009.1| predicted protein [Populus trichocarpa]
Length = 410
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 157/398 (39%), Positives = 240/398 (60%), Gaps = 32/398 (8%)
Query: 65 SGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFL 124
SG L A ++F++ +P+T +N +IRG+A+S P S++L QM +PDE+T++FL
Sbjct: 10 SGDLAYAQRLFDQLPHPNTFFYNTLIRGYAKSSIPSYSLHLVNQMRQNGVDPDEFTFNFL 69
Query: 125 LSVCARC--------GLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCAR 176
+ +R L E +++HG VL G+ S++F+R L++LY G A
Sbjct: 70 IKARSRVRVNINRNLPLVVECDEIHGAVLKLGFSSHLFVRNALIHLYAARGNPV---VAW 126
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
+FD+ VVSW+ L+ +V+ G+++ A +FD+MP R+VVSWTTM+S +Q SR+
Sbjct: 127 RVFDETVGVDVVSWSGLVLAHVRAGELERARWVFDQMPERDVVSWTTMVSAYSQAKYSRE 186
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEEN-FSVGREPVLVSLN 295
AL L+ M V D+V LV+ +SAC +GDL++G +HSY++EN F +VSL
Sbjct: 187 ALELYVTMLDKGVRPDEVTLVSVISACTNLGDLQMGYSVHSYIDENGFR-----WMVSLC 241
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------ 343
NALI MYA CG ++ A+ VF M R++ V+W SMI+ A ++A
Sbjct: 242 NALIDMYAKCGCMDRAWQVFNSMSRKSLVTWNSMISACANNRNPEDAFGLFSRMFNYGVA 301
Query: 344 ---LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFS 400
+TFL VL+A +H G VDEG + FE M ++ GI+ RIEHYGC+V++ +AG ++EAF
Sbjct: 302 PDGVTFLAVLTAYAHVGLVDEGYRLFESMQRDHGIEARIEHYGCVVNMLGQAGWLEEAFE 361
Query: 401 LVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
L+ +MP+ ND V G LL CR H + + +V +KL+
Sbjct: 362 LITSMPLPSNDVVWGVLLAACRKHGDVYMGERVVKKLL 399
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 130/333 (39%), Gaps = 71/333 (21%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS- 96
+IH ++ GFS ++ L+ Y G + A +VF++T W+ ++ H R+
Sbjct: 92 EIHGAVLKLGFSSHLFVRNALIHLYAARGNPVVAWRVFDETVGVDVVSWSGLVLAHVRAG 151
Query: 97 ----------ETPEKSVY--------------------LYKQMIDKETEPDEYTYSFLLS 126
+ PE+ V LY M+DK PDE T ++S
Sbjct: 152 ELERARWVFDQMPERDVVSWTTMVSAYSQAKYSREALELYVTMLDKGVRPDEVTLVSVIS 211
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPAR 185
C G + G VH + +G+ V + L+++Y +CG + A +F+ M +
Sbjct: 212 ACTNLGDLQMGYSVHSYIDENGFRWMVSLCNALIDMY----AKCGCMDRAWQVFNSMSRK 267
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
S+V+WNS MIS CA N A LF+ M
Sbjct: 268 SLVTWNS-------------------------------MISACANNRNPEDAFGLFSRMF 296
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC 305
V D V +A L+A A +G + G + ++ + + + +++M
Sbjct: 297 NYGVAPDGVTFLAVLTAYAHVGLVDEGYRLFESMQRDHGIEAR---IEHYGCVVNMLGQA 353
Query: 306 GEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQG 337
G +EEA+ + M N V W ++ K G
Sbjct: 354 GWLEEAFELITSMPLPSNDVVWGVLLAACRKHG 386
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
+ +HS I NGF + L+ Y G + A +VF S WN MI A +
Sbjct: 223 YSVHSYIDENGFRWMVSLCNALIDMYAKCGCMDRAWQVFNSMSRKSLVTWNSMISACANN 282
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
PE + L+ +M + PD T+ +L+ A GL EG ++
Sbjct: 283 RNPEDAFGLFSRMFNYGVAPDGVTFLAVLTAYAHVGLVDEGYRL 326
>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 172/530 (32%), Positives = 285/530 (53%), Gaps = 67/530 (12%)
Query: 47 GFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLY 106
GF+ + +L ++ + A + F++ WN MI G+ ++ V +
Sbjct: 131 GFAFDLIVQNSVLDLFMRCRKVDTARQAFDEMCEKDIVSWNMMISGYGNND----RVDIA 186
Query: 107 KQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVL---------------ASGY-- 149
++ D+ E + +++ ++ CG + G+ +VL SGY
Sbjct: 187 RKFFDRMPERNVVSWTSMI-----CGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMD 241
Query: 150 ---CSNVFIRTNLMNLY------LMSGGECGVG---CARLLFDDMPARSVVSWNSLLKGY 197
C N I M ++ +M G C G A+ FD MP ++V+SW +L GY
Sbjct: 242 IGDCVNARIIFGKMPIHDTGSWNIMISGFCKAGELESAKDFFDRMPNKNVISWGIMLDGY 301
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
+K GD +GA +FD+MP +N+V+W+TMI G A+NG+ +AL LF + + D+ ++
Sbjct: 302 IKNGDTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFIL 361
Query: 258 AALSACAEIGDLKLGK-WIHSYVEENFSVGREPVLVS---LNNALIHMYASCGEIEEAYG 313
+SAC+++G + + IH+YV P L+S + +LI MYA CG IE+A
Sbjct: 362 GIISACSQLGIIDAAESIIHNYVG--------PSLLSDLRVFTSLIDMYAKCGSIEKALQ 413
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGF 358
+F ++ + +++MI A G ++A+ +TFLGVL+AC+HGG
Sbjct: 414 MFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGL 473
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLL 418
VDEGR++F+ M + +GI+P +HY C+VDL R G ++EA++L++NMP+ P+ V G+LL
Sbjct: 474 VDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNMPIAPHSVVWGALL 533
Query: 419 LGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
CR+H N +LA A +L +I+P+ + Y+ L++N+YAAA RW VA VR K+ + V
Sbjct: 534 AACRVHCNVQLAEVAAAELF-KIEPDNSGNYI-LLSNIYAAAGRWGSVAKVRAKIREHRV 591
Query: 479 RKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
RK G SW++++ V+H+FV GD ++ + I L + GY D
Sbjct: 592 RKNRGSSWIELSHVVHEFVMGDMSHTDSDSISLILYLLCEDMKLSGYLID 641
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 190/396 (47%), Gaps = 32/396 (8%)
Query: 23 IFSLLQIRNTTKTLFQIHSQIII-NGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENP 81
I ++ T K+L IH++++I + + +++ KLL Y G AHKVF++ P
Sbjct: 5 ILHIIHNCKTLKSLKSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQP 64
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVH 141
+ +W +I G+ + +++ L+ QM + +T S +L AR F+ G+ V+
Sbjct: 65 NAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVY 124
Query: 142 GRVLASGYCSNVFIRTNLMNLYLMSGGEC-GVGCARLLFDDMPARSVVSWNSLLKGYVKR 200
G VL G+ ++ ++ ++++L++ C V AR FD+M + +VSWN ++ GY
Sbjct: 125 GFVLKYGFAFDLIVQNSVLDLFM----RCRKVDTARQAFDEMCEKDIVSWNMMISGYGNN 180
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
+D A K FD MP RNVVSWT+MI G + G +A LF+ M D + +
Sbjct: 181 DRVDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVK----DLASWNVMV 236
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN-NALIHMYASCGEIEEAYGVFRKMQ 319
S +IGD V G+ P+ + + N +I + GE+E A F +M
Sbjct: 237 SGYMDIGDC---------VNARIIFGKMPIHDTGSWNIMISGFCKAGELESAKDFFDRMP 287
Query: 320 RRNTVSWTSMITGFAKQGYAQEA-----------LLTFLGVLSACSHGGFVDEGRQFFEC 368
+N +SW M+ G+ K G A L+T+ ++ + G + + FE
Sbjct: 288 NKNVISWGIMLDGYIKNGDTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFER 347
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQN 404
+ IKP ++ S+ G++D A S++ N
Sbjct: 348 FKEQ-DIKPDETFILGIISACSQLGIIDAAESIIHN 382
>gi|255539585|ref|XP_002510857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549972|gb|EEF51459.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 641
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 164/470 (34%), Positives = 261/470 (55%), Gaps = 30/470 (6%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
H Q++ GF +I L+ Y G L A KVF+K ++ WN +I G+++
Sbjct: 180 HVQVLKLGFGSYLFIENSLIRMYGYFGELGYAQKVFDKMDDRDLVSWNSLICGYSQCNRF 239
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRV--LASGYCS-NVFIR 156
++ + L+ M + D T ++ V C E V V + + +V++
Sbjct: 240 KEVLDLFNLMREANVTADSVT---MVKVILACSYLCEDGVVDSMVKYIEDKHVDIDVYLG 296
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
+L+++Y G V AR +FD M +++VSWN++L GY GD+ A K+F+EMP R
Sbjct: 297 NSLIDMY---GRRGLVDLARRVFDRMQEKNIVSWNAMLTGYATAGDLVAAKKLFNEMPIR 353
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
NV+SWT MISGCAQ + AL LF EM A V D++ + + LSAC+ +G L G+ +H
Sbjct: 354 NVISWTCMISGCAQANQCSDALKLFQEMMDANVKPDEITVSSVLSACSHLGLLDTGQTVH 413
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
Y+ + + + V + NALI MY CG +++A VF M+++++VSWTSMI G A
Sbjct: 414 EYMCRH-DIKSD---VYVGNALIDMYCKCGVVDKALEVFHDMKKKDSVSWTSMILGLAVN 469
Query: 337 GYA---------------QEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G+ Q +F+G+L AC+H G VD+G ++FE M +G++P ++H
Sbjct: 470 GFVDNVFELFSQMLRDGLQPTHGSFIGILLACTHAGLVDKGLEYFESMEHVYGLRPEMKH 529
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YGC+VDL SR+G +D A+ ++ MP+ P+ + LL C++H N LA KL+ E+
Sbjct: 530 YGCVVDLLSRSGELDRAYEFIKQMPVVPDVVLWRILLSACKLHRNLVLAEIATSKLL-EL 588
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQING 491
DP + Y+ L++N YA + RW D + +R M+ V+KP S +++ G
Sbjct: 589 DPSNSGNYV-LLSNTYAGSDRWDDASRMRDLMVVGDVQKPSSWSSIEVIG 637
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 210/467 (44%), Gaps = 92/467 (19%)
Query: 19 TTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS-GYLINAHKVFEK 77
TTR+ +++ + K++ + H+ +I + ++ ++ Y S +L A+ F +
Sbjct: 56 TTRKCQQIIKSGFSIKSIKEQHAHLIRTHHHKNPKSMSNVIKSYALSRSHLNKANFAFIQ 115
Query: 78 TENPSTAIWNQMIRGHARSETPEKSVYLYKQ-MIDKETEPDEYTYSFLLSVCARCGLFRE 136
P+ I+N +IRG ++SE P +++ +Y M ++ D T+ +L C+R
Sbjct: 116 IGQPTLLIFNYLIRGLSQSENPNEAIVMYSDLMYNQGILGDNLTFIYLFKACSRVKDVLH 175
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKG 196
G+ H +VL G+ S +FI +L+ +Y G +G A+ +FD M R +VSWNSL+ G
Sbjct: 176 GQVFHVQVLKLGFGSYLFIENSLIRMYGYFG---ELGYAQKVFDKMDDRDLVSWNSLICG 232
Query: 197 YVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVAL 256
Y +Q + ++ L LFN MR A V D V +
Sbjct: 233 Y-------------------------------SQCNRFKEVLDLFNLMREANVTADSVTM 261
Query: 257 VAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFR 316
V + AC+ + + + + Y+E+ + V L N+LI MY G ++ A VF
Sbjct: 262 VKVILACSYLCEDGVVDSMVKYIEDK----HVDIDVYLGNSLIDMYGRRGLVDLARRVFD 317
Query: 317 KMQRRNTVSWTSMITGFAKQG--------------------------------------Y 338
+MQ +N VSW +M+TG+A G
Sbjct: 318 RMQEKNIVSWNAMLTGYATAGDLVAAKKLFNEMPIRNVISWTCMISGCAQANQCSDALKL 377
Query: 339 AQEAL--------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFS 390
QE + +T VLSACSH G +D G+ E M ++ IK + ++D++
Sbjct: 378 FQEMMDANVKPDEITVSSVLSACSHLGLLDTGQTVHEYMCRH-DIKSDVYVGNALIDMYC 436
Query: 391 RAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH----NNAELASQV 433
+ G++D+A + +M K + S++LG ++ N EL SQ+
Sbjct: 437 KCGVVDKALEVFHDMK-KKDSVSWTSMILGLAVNGFVDNVFELFSQM 482
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 84/228 (36%), Gaps = 36/228 (15%)
Query: 2 LVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAF 61
L +E++ AN +T + S T +H + + Y+ L+
Sbjct: 377 LFQEMMDAN--VKPDEITVSSVLSACSHLGLLDTGQTVHEYMCRHDIKSDVYVGNALIDM 434
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
Y G + A +VF + + W MI G A + + L+ QM+ +P ++
Sbjct: 435 YCKCGVVDKALEVFHDMKKKDSVSWTSMILGLAVNGFVDNVFELFSQMLRDGLQPTHGSF 494
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDD 181
+L C GL +G + ++ ++Y + GC D
Sbjct: 495 IGILLACTHAGLVDKGLEYF---------------ESMEHVYGLRPEMKHYGCVV----D 535
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP-HRNVVSWTTMISGC 228
+ +RS G++D A++ +MP +VV W ++S C
Sbjct: 536 LLSRS--------------GELDRAYEFIKQMPVVPDVVLWRILLSAC 569
>gi|334185681|ref|NP_189505.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273576|sp|Q9LJJ1.1|PP259_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g28640
gi|9294278|dbj|BAB02180.1| unnamed protein product [Arabidopsis thaliana]
gi|332643948|gb|AEE77469.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 168/520 (32%), Positives = 279/520 (53%), Gaps = 67/520 (12%)
Query: 31 NTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV----TSGYLINAHKVFEKTENPSTAIW 86
NT K + HS II+G + Y ++KLL ++ + + A +F+ E P++ ++
Sbjct: 22 NTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVY 81
Query: 87 NQMIRGHARSETPEKSVYLYKQMIDKETE---PDEYTYSFLLSVCARCGLFREGEQVHGR 143
+ MIR +RS P + + M+ +E E P T+ FL+ C + F G+Q+H
Sbjct: 82 DTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCW 141
Query: 144 VLASG-YCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGD 202
V+ +G + S+ ++T ++ +Y+ +LL D
Sbjct: 142 VVKNGVFLSDSHVQTGVLRIYVED---------KLLLD---------------------- 170
Query: 203 IDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSA 262
A K+FDE+P +VV W +++G + G + L +F EM + D+ ++ AL+A
Sbjct: 171 ---ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTA 227
Query: 263 CAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRN 322
CA++G L GKWIH +V++ + + V + AL+ MYA CG IE A VF+K+ RRN
Sbjct: 228 CAQVGALAQGKWIHEFVKKKSWIESD---VFVGTALVDMYAKCGCIETAVEVFKKLTRRN 284
Query: 323 TVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFF 366
SW ++I G+A GYA++A+ + LGVL+AC+HGGF++EGR
Sbjct: 285 VFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSML 344
Query: 367 ECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNN 426
E M + I P+ EHY C+VDL RAG +D+A +L++ MPMKP +V G+LL GCR H N
Sbjct: 345 ENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKN 404
Query: 427 AELASQVAQKLV----AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPP 482
EL + L+ ++ E+AA L ++N+Y + +R + + VR + + GVRK P
Sbjct: 405 VELGELAVKNLLDLEKGNVEEEEAA--LVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTP 462
Query: 483 GQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQ 522
G S ++++G + FV+GD ++ I+ + +++ A+Q
Sbjct: 463 GWSVLEVDGNVTKFVSGDVSHPNLLQIHTVIHLLSVDALQ 502
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 167/519 (32%), Positives = 282/519 (54%), Gaps = 56/519 (10%)
Query: 36 LFQIHSQIIINGFSQKNYILAK-LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHA 94
L +IH + +GF Q + ++A +A Y G L A VF E+ + WN +I GH
Sbjct: 419 LKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHV 478
Query: 95 RSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVF 154
++ P K++ LY M EPD +T + LLS CAR G+++HG +L +G+ + F
Sbjct: 479 QNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEF 538
Query: 155 IRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP 214
I +L++LY V C ++L + FD M
Sbjct: 539 ICISLVSLY--------VQCGKILLAKL--------------------------FFDNME 564
Query: 215 HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKW 274
+N+V W TMI+G +QN AL +F++M +++ D+++++ AL AC+++ L+LGK
Sbjct: 565 EKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKE 624
Query: 275 IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
+H + ++ V SL I MYA CG +E++ +F ++ + V+W +ITG+
Sbjct: 625 LHCFAVKSHLTEHSFVTCSL----IDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYG 680
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
G+ ++A+ +TF+ +L+AC+H G V EG ++ M +GIKP++
Sbjct: 681 IHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKL 740
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
EHY C+VD+ RAG ++EA LV +P KP+ + SLL CR + + ++ +VA KL+
Sbjct: 741 EHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLL- 799
Query: 440 EIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG 499
E+ P++A Y+ L++N YA +W +V +RQ+M ++G++K G SW++I G + F+ G
Sbjct: 800 ELGPDKAENYV-LISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVG 858
Query: 500 DSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
D + Q+ I +T E+ + + GYKPD S + +EE
Sbjct: 859 DESLLQSMKIQQTWIELEKKINKIGYKPDTSCVLHELEE 897
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 180/391 (46%), Gaps = 69/391 (17%)
Query: 45 INGFSQKNYILAK------LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
++GF+ K +L+ L+A Y G++ +A KVF+K + WN ++ +
Sbjct: 218 VHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGV 277
Query: 99 PEKSVYLYKQMI--DKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
E+S L+K ++ D+ PD T ++ +CAR G R G HG L G C + +
Sbjct: 278 FEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVN 337
Query: 157 TNLMNLYLMSGGECGVGC-ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
++L+++Y +CG C AR+LFD ++V+SWNS++ GY K D GA+++ +M
Sbjct: 338 SSLLDMY----SKCGYLCEARVLFD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQM 392
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSAC-AEIGDLKLGKW 274
+ +V +++V L+ L C EI LKL K
Sbjct: 393 ED------------------------------KVKVNEVTLLNVLPVCEEEIQFLKL-KE 421
Query: 275 IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
IH Y + + + ++ NA + YA CG + A GVF M+ + SW ++I G
Sbjct: 422 IHGYALRHGFIQSDELVA---NAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHV 478
Query: 335 KQGYAQEA---------------LLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
+ G+ ++A L T +LSAC+ + G++ M +N G + +
Sbjct: 479 QNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRN-GFE--L 535
Query: 380 EHYGC--MVDLFSRAGLMDEAFSLVQNMPMK 408
+ + C +V L+ + G + A NM K
Sbjct: 536 DEFICISLVSLYVQCGKILLAKLFFDNMEEK 566
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 149/336 (44%), Gaps = 49/336 (14%)
Query: 10 NPATSSKALTTRQIFSLL-QIRNTTKTL---FQIHSQIIINGFSQKNYIL-AKLLAFYVT 64
N SS +Q+ LL Q+ K + +IH+ I + Q + +L +L+ Y
Sbjct: 82 NDVVSSSNSKPKQLIGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSI 141
Query: 65 SGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMID-KETEPDEYTYSF 123
++ VF + + +WN ++ G+ R+ +V+++ +MI E PD +T
Sbjct: 142 CDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPC 201
Query: 124 LLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDM 182
++ C R GE VHG L + S+VF+ L+ +Y G+ G V A +FD M
Sbjct: 202 VIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMY----GKFGFVESAVKVFDKM 257
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
P R++VSWNS++ C +NG ++ LF
Sbjct: 258 PQRNLVSWNSVM-------------------------------YACLENGVFEESYGLFK 286
Query: 243 EMRRARVGL--DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIH 300
+ GL D +V + CA G+++LG H + G + +N++L+
Sbjct: 287 GLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGE----LKVNSSLLD 342
Query: 301 MYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
MY+ CG + EA +F +N +SW SMI G++K
Sbjct: 343 MYSKCGYLCEARVLF-DTNEKNVISWNSMIGGYSKD 377
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 209 IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM-RRARVGLDQVALVAALSACAEIG 267
+F+ +N+ W ++SG +N R A+ +F EM D L + AC +
Sbjct: 151 VFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVY 210
Query: 268 DLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
D++LG+ +H + + + V + NALI MY G +E A VF KM +RN VSW
Sbjct: 211 DVRLGEAVHGFALKTKVLSD----VFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWN 266
Query: 328 SMITGFAKQGYAQEALLTFLGVLSA-----------------CSHGGFVDEGRQFFECMN 370
S++ + G +E+ F G+L+ C+ G V G F +
Sbjct: 267 SVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLG-MVFHGLA 325
Query: 371 QNWGIKPRIEHYGCMVDLFSRAGLMDEA 398
G+ ++ ++D++S+ G + EA
Sbjct: 326 LKLGLCGELKVNSSLLDMYSKCGYLCEA 353
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
L C E ++++G+ IH+++ + + VL++ L+ MY+ C ++ VF +
Sbjct: 100 LQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLIT---RLVTMYSICDSPYDSCLVFNASR 156
Query: 320 RRNTVSWTSMITGFAKQGYAQEALLTFLGVLS 351
R+N W ++++G+ + ++A+ F+ ++S
Sbjct: 157 RKNLFLWNALLSGYLRNSLFRDAVFVFVEMIS 188
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 167/538 (31%), Positives = 282/538 (52%), Gaps = 73/538 (13%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
LL+ Y SG + N F++ + +N I G + + P++S+ L+K+M + EP
Sbjct: 95 LLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPT 154
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCAR 176
EYT +L+ A+ R G+Q+HG ++ + NVFI L ++Y +CG + AR
Sbjct: 155 EYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMY----AKCGEIEQAR 210
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGD---------------------------------- 202
LFD + +++VSWN ++ GY K G
Sbjct: 211 WLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCG 270
Query: 203 -IDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALS 261
+D A ++F E +++V WT M+ G A+NG+ AL LFNEM + D L + +S
Sbjct: 271 RVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVS 330
Query: 262 ACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN------ALIHMYASCGEIEEAYGVF 315
+CA++ L G+ +H + +L LNN ALI MY+ CG I++A VF
Sbjct: 331 SCAKLASLHHGQAVHG----------KSILAGLNNNLLVSSALIDMYSKCGFIDDARSVF 380
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVD 360
M RN VSW +MI G A+ G+ ++AL +TF+G+LSAC H +++
Sbjct: 381 NLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIE 440
Query: 361 EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
+G+++F+ + G+ P ++HY CMV+L R G +++A +L++NM P+ + +LL
Sbjct: 441 QGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSI 500
Query: 421 CRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRK 480
C + + ++VA + + E+DP A Y+ L +N+YA+ RW+DVA+VR M V+K
Sbjct: 501 CSTKGDI-VNAEVAARHLFELDPTIAVPYIML-SNMYASMGRWKDVASVRNLMKSKNVKK 558
Query: 481 PPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
G SW++I+ +H F + D T+ ++ IY+ L + + +EG+ P+ + + + E
Sbjct: 559 FAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGE 616
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 174/355 (49%), Gaps = 43/355 (12%)
Query: 101 KSVYLYKQMID----KETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGY-CSNVFI 155
K+ + +Q +D + T E Y+ L+ C R + +++ + + ++ F+
Sbjct: 2 KAKSMLRQSVDLLCSRSTATSE-AYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFL 60
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
L++LY G + A+ LFD M R + SWN+LL Y K G I FD MP
Sbjct: 61 HNQLLHLYAKFGK---LRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPF 117
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
R+ VS+ T I+G + N +++L LF M+R + +V+ L+A A++ DL+ GK I
Sbjct: 118 RDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQI 177
Query: 276 H-SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
H S + NF +G V + NAL MYA CGEIE+A +F + ++N VSW MI+G+A
Sbjct: 178 HGSIIVRNF-LGN----VFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYA 232
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
K G ++ + +T +++A G VDE R+ F + I
Sbjct: 233 KNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKE-----KDI 287
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNM---PMKPNDAVLGSLLLGCRIHNNAELAS 431
+ M+ +++ G ++A L M ++P+ L S++ C A+LAS
Sbjct: 288 VCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSC-----AKLAS 337
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 143/299 (47%), Gaps = 42/299 (14%)
Query: 42 QIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEK 101
Q+ ++G ++ ++A Y G + A +VF + + W M+ G+A++ E
Sbjct: 246 QMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREED 305
Query: 102 SVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMN 161
++ L+ +M+ + EPD YT S ++S CA+ G+ VHG+ + +G +N+ + + L++
Sbjct: 306 ALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALID 365
Query: 162 LYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVS 220
+Y +CG + AR +F+ MP R+VVSWN++
Sbjct: 366 MY----SKCGFIDDARSVFNLMPTRNVVSWNAM--------------------------- 394
Query: 221 WTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK-WIHSYV 279
I GCAQNG + AL LF M + + D V + LSAC ++ G+ + S
Sbjct: 395 ----IVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSIT 450
Query: 280 EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR-NTVSWTSMITGFAKQG 337
++ G P L ++++ G IE+A + + M + + W+++++ + +G
Sbjct: 451 NQH---GMTPTLDHY-ACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKG 505
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 7/139 (5%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
ML+E I P + SS + ++ SL + +H + I+ G + + + L+
Sbjct: 313 MLLEHIEPDSYTLSSVVSSCAKLASLHHGQ-------AVHGKSILAGLNNNLLVSSALID 365
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y G++ +A VF + WN MI G A++ + ++ L++ M+ ++ +PD T
Sbjct: 366 MYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVT 425
Query: 121 YSFLLSVCARCGLFREGEQ 139
+ +LS C C +G++
Sbjct: 426 FIGILSACLHCNWIEQGQE 444
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 174/540 (32%), Positives = 281/540 (52%), Gaps = 67/540 (12%)
Query: 21 RQIFSLL-----QIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVF 75
R F LL ++RN FQ ++ I+ G ++ L++ + GY+ + ++F
Sbjct: 104 RHTFPLLLKAFSKLRNENP--FQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLF 161
Query: 76 EKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFR 135
+T W +I G R+ +++ + +M E DE T ++SV + R
Sbjct: 162 IETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVT---VVSVLCAAAMLR 218
Query: 136 E---GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNS 192
+ G VHG + SG R+++D V ++
Sbjct: 219 DVWFGRWVHGFYVESG---------------------------RVIWD------VYVGSA 245
Query: 193 LLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLD 252
L+ Y K G D A K+F+EMP RN+VSW +I+G Q + ++AL +F EM + +
Sbjct: 246 LVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPN 305
Query: 253 QVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAY 312
Q + +AL+ACA++G L G+W+H YV+ + +G L AL+ MY+ CG ++EA
Sbjct: 306 QSTVTSALTACAQLGSLDQGRWLHEYVDRS-KLGLNS---KLGTALVDMYSKCGCVDEAL 361
Query: 313 GVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGG 357
VF K+ ++ WT+MI G A +G A +L +TFLGVLSAC+HGG
Sbjct: 362 LVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGG 421
Query: 358 FVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSL 417
VDEG + F M ++ ++P ++HYGCMVDL RAG ++EA +++MPM+P V G+L
Sbjct: 422 LVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGAL 481
Query: 418 LLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMG 477
GC IH EL + L+ ++ P + Y+ L+AN+Y+ ++W+ A VR+ M G
Sbjct: 482 FSGCMIHKAFELGEHIGNHLI-KLQPHHSGRYI-LLANLYSRCQKWEAAANVRRLMKGKG 539
Query: 478 VRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIE 537
V K P SW+++NGV+H+F+A D ++ ++ +Y LG +T Q Y D + L I+
Sbjct: 540 VDKSPACSWIEVNGVIHEFIAFDKSHIESINVYMMLGSVTAQLKLATYALDSNLLTFTID 599
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 204/429 (47%), Gaps = 67/429 (15%)
Query: 32 TTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS-GYLINAHKVFEKTENPSTAIWNQMI 90
T L Q S +I +G + + L+ LL GY + +F++ P +WN ++
Sbjct: 20 TFDHLNQTTSILITSGLAHHTFFLSDLLRSATKDLGYTL---LLFDRLATPYIFLWNTIV 76
Query: 91 RGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE-QVHGRVLASGY 149
R + S P+ + Y ++ + PD +T+ LL ++ L E Q + ++ G
Sbjct: 77 RSFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSK--LRNENPFQFYAHIVKFGL 134
Query: 150 CSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWK 208
+ F++ +L++ + CG V C+R LF + + VVSW +L
Sbjct: 135 DFDAFVQNSLVSAF----AHCGYVDCSRRLFIETAKKDVVSWTAL--------------- 175
Query: 209 IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGD 268
I+GC +NG++ +AL F EMR + V +D+V +V+ L A A + D
Sbjct: 176 ----------------INGCLRNGRAVEALECFVEMRSSGVEVDEVTVVSVLCAAAMLRD 219
Query: 269 LKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTS 328
+ G+W+H + E+ GR V + +AL+ MY+ CG ++A VF +M RN VSW +
Sbjct: 220 VWFGRWVHGFYVES---GRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGA 276
Query: 329 MITGFAKQGYAQEALLTF---------------LGVLSACSHGGFVDEGRQFFECMNQN- 372
+I G+ + +EAL F L+AC+ G +D+GR E ++++
Sbjct: 277 LIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSK 336
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK---PNDAVLGSLLLGCRIHNNAEL 429
G+ ++ +VD++S+ G +DEA + + +P K P A++ L + ++ L
Sbjct: 337 LGLNSKLG--TALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNL 394
Query: 430 ASQVAQKLV 438
SQ+ + V
Sbjct: 395 FSQMIRSRV 403
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 129/291 (44%), Gaps = 46/291 (15%)
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG 250
+ LL+ K D+ +FD + + W T++ + + + + L ++ +R V
Sbjct: 44 SDLLRSATK--DLGYTLLLFDRLATPYIFLWNTIVRSFSASSQPQMVLVAYSRLRNHGVI 101
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEE 310
D+ L A +++ + ++ V+ F + + + N+L+ +A CG ++
Sbjct: 102 PDRHTFPLLLKAFSKLRNENPFQFYAHIVK--FGLDFDAF---VQNSLVSAFAHCGYVDC 156
Query: 311 AYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACS- 354
+ +F + +++ VSWT++I G + G A EAL +T + VL A +
Sbjct: 157 SRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTVVSVLCAAAM 216
Query: 355 ----------HGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQN 404
HG +V+ GR ++ + +VD++S+ G D+A +
Sbjct: 217 LRDVWFGRWVHGFYVESGRVIWD-----------VYVGSALVDMYSKCGYCDDAVKVFNE 265
Query: 405 MPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE-IDPEQAAGYLALVA 454
MP + N G+L+ G N + A +V Q+++ E I+P Q+ AL A
Sbjct: 266 MPTR-NLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTA 315
>gi|224058579|ref|XP_002299552.1| predicted protein [Populus trichocarpa]
gi|222846810|gb|EEE84357.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 171/521 (32%), Positives = 291/521 (55%), Gaps = 45/521 (8%)
Query: 2 LVEEIIPANPATSS---KALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKL 58
L ++P P + ++ + + SLL+I T Q+H+++ GF + L +L
Sbjct: 4 LPPSLLPTKPTKNHNQFQSFSLKSCLSLLEICKFTTEFAQLHARLTKLGFIKNPLALTRL 63
Query: 59 LAFYVTSGYL-IN-AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMI-DKETE 115
L + S Y IN A +F +NP+T +N MIRG+A+ E PE ++ L+ M+ + +
Sbjct: 64 LCYSSISQYANINYAQSIFNFDKNPNTFAYNVMIRGYAQREKPENALSLFYSMLCNANSG 123
Query: 116 PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGC 174
++ T+ F+L C++ EG+QVHG V G ++F++ +L+++Y CG +G
Sbjct: 124 QNKLTFPFVLKACSQVRAIEEGKQVHGLVFKHGLSEDLFVQNSLISMY----SSCGLIGF 179
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
A +F+ + VVSWNS++ G V G ++ ++FD M R++V+W +I G + G
Sbjct: 180 ACQVFNKIDDPDVVSWNSMISGLVDLGFVEEGKQMFDRMSKRSLVTWNCLIDGYVKAGLL 239
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
+A LF++MR +V+ L+AC+ +G L+ G+W+ +++E+N + VL
Sbjct: 240 MEARELFDQMR--------FTMVSVLTACSYLGALEQGEWMQAHIEKN-GIDVNSVL--- 287
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------- 343
AL+ M+A CG IE A VF+ ++ R+ +W S+I A G+ QEA
Sbjct: 288 GTALVEMFAKCGSIERALSVFKSIEERDVGAWNSIIHKLAAHGHGQEAFAIFSDMLRSNT 347
Query: 344 ----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAF 399
+ FLG+LS C H G VDEG++FF+ M++ +G+ P++EHYGCMVDL A L++EA
Sbjct: 348 LLDGIIFLGLLSVCRHLGLVDEGKRFFQLMSEEYGLVPKVEHYGCMVDLLCHADLLEEAR 407
Query: 400 SLVQN---MPMKPNDAVLGSLL-LGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVAN 455
L+ + MK + + G+LL + C++ N + + A K + ++DP Y L +N
Sbjct: 408 DLIDSSHASQMKSSVPMWGALLGVSCQLKN--IVMGEYAAKHLLQLDPFDGNCYTVL-SN 464
Query: 456 VYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDF 496
+Y+AA ++ VR +M K G+ K PG S ++I+G++ DF
Sbjct: 465 LYSAAGLYEKAIEVRNEMKKQGLEKIPGSSSMEIDGLVLDF 505
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 169/506 (33%), Positives = 263/506 (51%), Gaps = 55/506 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH+QI+ + + L Y+ G + +A +VFE N WN MI G S
Sbjct: 267 QIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSG 326
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E++ ++ +M+ + PD TY +LS CAR G G+++H R + G S+V
Sbjct: 327 QLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGN 386
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+N+Y K G + A ++FD MP R+
Sbjct: 387 ALINMY----------------------------------SKAGSMKDARQVFDRMPKRD 412
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VVSWT ++ G A G+ ++ S F +M + V +++ + L AC+ LK GK IH+
Sbjct: 413 VVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHA 472
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
V + +++ NAL+ MY CG +E+A V M R+ V+W ++I G A+ G
Sbjct: 473 EVVKAGIFAD----LAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNG 528
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
EAL TF+ V+SAC V+EGR+ F M +++GI P +HY
Sbjct: 529 RGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHY 588
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
CMVD+ +RAG + EA ++ MP KP+ A+ G+LL CR H N E+ Q A++ + +++
Sbjct: 589 ACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCL-KLE 647
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P+ A Y++L + +YAAA W+DVA +R+ M + GV+K PG+SW+++ G +H FVAGD +
Sbjct: 648 PQNAGTYVSL-SFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQS 706
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPD 528
+ + IY L +T Q GY PD
Sbjct: 707 HPRTEEIYSELEALTKQIKSLGYVPD 732
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 187/399 (46%), Gaps = 58/399 (14%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H I+ G YI+ LL YV G + A ++F+K N S WN MI G+A
Sbjct: 65 QVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRG 124
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ L+ M + EPD++T+ +LS C+ G +VH RV+ +G +N +
Sbjct: 125 LGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGN 184
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L+++Y +CG V AR +FD M +R VSW +L Y
Sbjct: 185 ALISMY----AKCGSVRDARRVFDAMASRDEVSWTTLTGAY------------------- 221
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
A++G ++++L ++ M + V ++ + LSAC + L+ GK IH
Sbjct: 222 ------------AESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIH 269
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+ + E+ V ++ AL MY CG +++A VF + R+ ++W +MI G
Sbjct: 270 AQIVES----EHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDS 325
Query: 337 GYAQEA---------------LLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G +EA +T+L +LSAC+ G + G++ ++ G+ +
Sbjct: 326 GQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKD-GLVSDVRF 384
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
+++++S+AG M +A + MP + D V + L+G
Sbjct: 385 GNALINMYSKAGSMKDARQVFDRMPKR--DVVSWTALVG 421
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 188/398 (47%), Gaps = 56/398 (14%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H +++ G + + L++ Y G + +A +VF+ + W + +A S
Sbjct: 166 EVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESG 225
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++S+ Y M+ + P TY +LS C +G+Q+H +++ S + S+V + T
Sbjct: 226 YAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVST 285
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
+L K Y+K G + A ++F+ +P+R+
Sbjct: 286 ----------------------------------ALTKMYIKCGAVKDAREVFECLPNRD 311
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
V++W TMI G +G+ +A +F+ M + V D+V +A LSACA G L GK IH+
Sbjct: 312 VIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHA 371
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
++ V V NALI+MY+ G +++A VF +M +R+ VSWT+++ G+A G
Sbjct: 372 RAVKDGLVSD----VRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCG 427
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
E+ +T++ VL ACS+ + G++ + + GI +
Sbjct: 428 QVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKA-GIFADLAVA 486
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
++ ++ + G +++A + + M + D V + L+G
Sbjct: 487 NALMSMYFKCGSVEDAIRVSEGMSTR--DVVTWNTLIG 522
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 165/370 (44%), Gaps = 79/370 (21%)
Query: 112 KETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG 171
K ++ D Y Y LL C + G+QVH +L G NV+I L+ LY+ G
Sbjct: 38 KGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCG---S 94
Query: 172 VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQN 231
V AR LFD +SVVSWN ++ GY R
Sbjct: 95 VNEARRLFDKFSNKSVVSWNVMISGYAHR------------------------------- 123
Query: 232 GKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE-----NFSVG 286
G ++A +LF M++ + D+ V+ LSAC+ L G+ +H V E N +VG
Sbjct: 124 GLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVG 183
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--- 343
NALI MYA CG + +A VF M R+ VSWT++ +A+ GYAQE+L
Sbjct: 184 ---------NALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTY 234
Query: 344 ------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG------CM 385
+T++ VLSAC +++G+Q + ++ EH+ +
Sbjct: 235 HAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVES-------EHHSDVRVSTAL 287
Query: 386 VDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNA-ELASQVAQKLVAEIDPE 444
++ + G + +A + + +P + D + + ++G + + E A + +++ E
Sbjct: 288 TKMYIKCGAVKDAREVFECLPNR--DVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAP 345
Query: 445 QAAGYLALVA 454
YLA+++
Sbjct: 346 DRVTYLAILS 355
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 185/575 (32%), Positives = 290/575 (50%), Gaps = 97/575 (16%)
Query: 20 TRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLIN-AHKVFEKT 78
+R LL ++ L +IH+ ++ NG Q + KL+ ++ A K+F++
Sbjct: 29 SRSFNYLLNCCSSLPDLSRIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQM 88
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE 138
+WN +IRG+A + E+++ LY M PD YT+ F++ CA REG+
Sbjct: 89 PKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGK 148
Query: 139 QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYV 198
+VH ++ G+ S+VF++++L+ +Y SG G+ L+F +M R++VSW +++ GYV
Sbjct: 149 EVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGM---ELVFGEMVVRNIVSWTAVIAGYV 205
Query: 199 KRGDIDGAWKIFDEM----PHRNVVSWTTMISGCA------------------------- 229
+ +F EM N V+ +++ CA
Sbjct: 206 QNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVS 265
Query: 230 ----------QNGKSRQALSLFNEM----------------------------RRAR--- 248
+ G A SLF+ M RR +
Sbjct: 266 LTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEK 325
Query: 249 VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEI 308
V D + +V+ +SACA +G L G+W+H V+ G E + VS+ NALI MYA CG I
Sbjct: 326 VDFDYITMVSVISACASLGALNTGRWMHELVKRK---GLE-INVSITNALIDMYAKCGNI 381
Query: 309 EEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSAC 353
+ A VF ++ R+ VSWTSMI A G+ ++AL TF V +AC
Sbjct: 382 DLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTAC 441
Query: 354 SHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAV 413
H G V+EGR+ FE M +++ I P +EH CMVDL RAG + EA+ + MP++P+ +V
Sbjct: 442 RHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSV 501
Query: 414 LGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKM 473
G+LL CRIH+N ELA VA+KL +DP+ Y+ L++N+YA A RW+D A +R+ M
Sbjct: 502 WGALLGSCRIHSNLELAELVAEKLFL-LDPQTVTFYV-LMSNIYAEAGRWEDAARLRKLM 559
Query: 474 IKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASL 508
+ ++K PG S V++N H F++G + Q+SL
Sbjct: 560 EERELKKIPGHSLVEVNRRFHTFLSGSRS--QSSL 592
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 177/549 (32%), Positives = 290/549 (52%), Gaps = 65/549 (11%)
Query: 14 SSKALTTRQIFSLLQI----RNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLI 69
S ++ ++Q + LL + R++ ++H I+ NG Q ++ KL+ Y G +
Sbjct: 70 SQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVD 129
Query: 70 NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVC- 128
A KVF+KT + +WN + R + E+ + LY +M E D +TY+++L C
Sbjct: 130 YARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACV 189
Query: 129 -ARCGL--FREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPAR 185
+ C + +G+++H + GY S+V+I T L+++Y G C V A +F MP R
Sbjct: 190 ASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFG--C-VDYASYVFGGMPVR 246
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
+VVSW++++ Y A+NGK+ +AL F EM
Sbjct: 247 NVVSWSAMIACY-------------------------------AKNGKAFEALRTFREMM 275
Query: 246 R--ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
R + V +V+ L ACA + L+ GK IH Y+ G + +L + +AL+ MY
Sbjct: 276 RETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYI---LRRGLDSILPVI-SALVTMYG 331
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLG 348
CG++E VF +M R+ VSW S+I+ + GY ++A+ +TF+
Sbjct: 332 RCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVS 391
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
VL ACSH G V+EG++ FE M ++ GIKP+IEHY CMVDL RA +DEA +VQ+M +
Sbjct: 392 VLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTE 451
Query: 409 PNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAA 468
P V GSLL CRIH N ELA + +++L A ++P+ A Y+ L+A++YA A+ W +V
Sbjct: 452 PGPKVWGSLLGSCRIHGNVELAERASRRLFA-LEPKNAGNYV-LLADIYAEAQMWDEVKR 509
Query: 469 VRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
V++ + G++K PG+ W+++ ++ FV+ D I+ L ++ ++GY P
Sbjct: 510 VKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQ 569
Query: 529 ISELFLGIE 537
+ +E
Sbjct: 570 TKGVLYELE 578
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 152/375 (40%), Gaps = 67/375 (17%)
Query: 87 NQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLA 146
NQ+I+ + ++++ +++ +E+ P + TY L+ C + +VH +L
Sbjct: 50 NQLIQSLCKEGKLKQAI----RVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 147 SGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGA 206
+G + F+ T L+ +Y G V AR +FD R++ WN+L +
Sbjct: 106 NGSDQDPFLATKLIGMYSDLG---SVDYARKVFDKTRKRTIYVWNALFRAL--------- 153
Query: 207 WKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSAC--- 263
G + L L+ +M R V D+ L AC
Sbjct: 154 ----------------------TLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVAS 191
Query: 264 -AEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRN 322
+ L GK IH+++ V + L+ MYA G ++ A VF M RN
Sbjct: 192 ECTVNHLMKGKEIHAHLTRRGYSSH----VYIMTTLVDMYARFGCVDYASYVFGGMPVRN 247
Query: 323 TVSWTSMITGFAKQGYAQEALLTF-----------------LGVLSACSHGGFVDEGRQF 365
VSW++MI +AK G A EAL TF + VL AC+ +++G+
Sbjct: 248 VVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLI 307
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAV-LGSLLLGCRIH 424
+ + G+ + +V ++ R G ++ + M D V SL+ +H
Sbjct: 308 HGYILRR-GLDSILPVISALVTMYGRCGKLEVGQRVFDR--MHDRDVVSWNSLISSYGVH 364
Query: 425 NNAELASQVAQKLVA 439
+ A Q+ ++++A
Sbjct: 365 GYGKKAIQIFEEMLA 379
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 268/518 (51%), Gaps = 59/518 (11%)
Query: 31 NTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV---TSGYLINAHKVFEKTENPSTAIWN 87
N+ + L QI + I + KL+ F T + A +F+ P I+N
Sbjct: 42 NSERELMQIQA-YAIKSHQEDVSFNTKLINFCTESPTESSMSYARHLFDAMSEPDIVIFN 100
Query: 88 QMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLAS 147
+ RG++RS P + L+ ++++ + PD YT+ LL CA EG Q+H +
Sbjct: 101 SIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAVAKALEEGRQLHCLSMKL 160
Query: 148 GYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAW 207
G NV++ L+N+Y EC D+D A
Sbjct: 161 GVDDNVYVCPTLINMY----TECE------------------------------DVDAAR 186
Query: 208 KIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIG 267
+FD + VV + MI+G A+ + +ALSLF EM+ + +++ L++ LS+CA +G
Sbjct: 187 CVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKNLKPNEITLLSVLSSCALLG 246
Query: 268 DLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
L LGKWIH Y +++ V +N ALI M+A CG +++A +F M+ ++T +W+
Sbjct: 247 SLDLGKWIHEYAKKHGFCK----YVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAWS 302
Query: 328 SMITGFAKQGYAQEALL---------------TFLGVLSACSHGGFVDEGRQFFECMNQN 372
+MI +A G A+ ++L TFLG+L+ACSH G V+EGR++F M
Sbjct: 303 AMIVAYANHGQAENSMLMFERMRSENVQPDEITFLGLLNACSHTGLVEEGREYFSWMVHE 362
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQ 432
+GI P I+HYG MVDL RAG +++A+ + +P+ P + LL C HNN ELA +
Sbjct: 363 FGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLELAEK 422
Query: 433 VAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGV 492
V+++++ E+D Y+ L +N+YA K+W+ V ++R+ M K PG S +++N V
Sbjct: 423 VSERIL-ELDDSHGGDYVIL-SNLYARNKKWEAVDSLRKVMKDRKAVKVPGCSSIEVNNV 480
Query: 493 LHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
+H+F +GD + +++ L E+ + GY PD S
Sbjct: 481 VHEFFSGDGVKSATTKLHRALDEMVKELKLAGYVPDTS 518
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 164/516 (31%), Positives = 272/516 (52%), Gaps = 56/516 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH+ + + F+ ++ L+ Y G ++ AHKVF+K N W +I G+A+++
Sbjct: 72 KIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKDMVSWTSLIAGYAQND 131
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
P +++ L M+ +P+ +T++ LL G Q+H + + +V++ +
Sbjct: 132 MPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIHALAVKCDWHEDVYVGS 191
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y CG +D A +FD++ +N
Sbjct: 192 ALLDMY----ARCG------------------------------KMDMATAVFDKLDSKN 217
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VSW +ISG A+ G AL +F EM+R + SA A IG L+ GKW+H+
Sbjct: 218 GVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHA 277
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
++ ++ R+ + + N ++ MYA G + +A VF ++ ++ V+W SM+T FA+ G
Sbjct: 278 HMIKS----RQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYG 333
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+EA+ ++FL +L+ACSHGG V EG+ +F+ M + + ++P IEHY
Sbjct: 334 LGKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFD-MIKEYNLEPEIEHY 392
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
+VDL RAGL++ A + MPM+P AV G+LL CR+H NA++ Q A V ++D
Sbjct: 393 VTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVG-QFAADHVFQLD 451
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P+ + G L+ N+YA+ W A VR+ M GV+K P SWV+I +H FVA D T
Sbjct: 452 PDDS-GPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDT 510
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ +A IYK EI+M+ +EGY PD+ + L ++E
Sbjct: 511 HPRAEEIYKMWDEISMKIRKEGYVPDMDYVLLHVDE 546
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 163/502 (32%), Positives = 272/502 (54%), Gaps = 44/502 (8%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
L++ YV G + A ++F++ WN M+ G+AR ++ +++ D D
Sbjct: 74 LMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEA----RRLFDAAPVRD 129
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCS-----NVFIRTNLMNLYLMSGGECGV 172
+T++ ++S A+ G+ E +V + S +I+ +M+
Sbjct: 130 VFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDE---------- 179
Query: 173 GCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNG 232
A+ LF+ MP R+V SWN++L GY + G ++ A +FD MP ++ VSW M++ +Q G
Sbjct: 180 --AKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGG 237
Query: 233 KSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS-YVEENFSVGREPVL 291
S + L LF EM R +++ A LS CA+I L+ G +H + + VG
Sbjct: 238 CSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVG----- 292
Query: 292 VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------- 343
+ NAL+ MY CG +E+A F +M+ R+ VSW +MI G+A+ G+ +EAL
Sbjct: 293 CFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRT 352
Query: 344 -------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMD 396
+T +GVL+ACSH G V++G +F M+ ++G+ + EHY CM+DL RAG +
Sbjct: 353 TSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLA 412
Query: 397 EAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANV 456
EA L+++MP +P+ + G+LL RIH N EL A+K+ E++PE A Y+ L++N+
Sbjct: 413 EAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIF-ELEPENAGMYV-LLSNI 470
Query: 457 YAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEI 516
YA++ +W+D +R M + GV+K PG SW+++ +H F AGD + + IY L ++
Sbjct: 471 YASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDL 530
Query: 517 TMQAMQEGYKPDISELFLGIEE 538
M+ + GY + +EE
Sbjct: 531 DMRMKKAGYVSATDMVLHDVEE 552
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 100/203 (49%), Gaps = 23/203 (11%)
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
AR LF+ V+SWN+L+ GYV+ G + A ++FD MP R+VVSW M+SG A+ G
Sbjct: 56 ARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDM 115
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
+A LF+ A D A +S A+ G L+ + + + E +V
Sbjct: 116 VEARRLFD----AAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSW------- 164
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF-------- 346
NA++ Y ++EA +F M RN SW +M+TG+A+ G +EA F
Sbjct: 165 -NAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDA 223
Query: 347 ---LGVLSACSHGGFVDEGRQFF 366
+L+A S GG +E Q F
Sbjct: 224 VSWAAMLAAYSQGGCSEETLQLF 246
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 110/246 (44%), Gaps = 30/246 (12%)
Query: 172 VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQN 231
V AR FD P + VSWN +L YV+ G ++ A +F+ +V+SW ++SG Q
Sbjct: 22 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQW 81
Query: 232 GKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL 291
GK +A LF+ M G D V+ +S A GD+ VE PV
Sbjct: 82 GKMSEARELFDRM----PGRDVVSWNIMVSGYARRGDM---------VEARRLFDAAPVR 128
Query: 292 -VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEA-------- 342
V A++ YA G +EEA VF M RN VSW +M+ + ++ EA
Sbjct: 129 DVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMP 188
Query: 343 ---LLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAF 399
+ ++ +L+ + G ++E + F+ M Q + + M+ +S+ G +E
Sbjct: 189 CRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVS-----WAAMLAAYSQGGCSEETL 243
Query: 400 SLVQNM 405
L M
Sbjct: 244 QLFIEM 249
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 107/250 (42%), Gaps = 60/250 (24%)
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
MP R V++N ++ + G + A FD P ++ VSW M++ +NG+ +A LF
Sbjct: 1 MPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF 60
Query: 242 NEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHM 301
N +R D ++ W NAL+
Sbjct: 61 N----SRTEWDVIS------------------W---------------------NALMSG 77
Query: 302 YASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEA-----------LLTFLGVL 350
Y G++ EA +F +M R+ VSW M++G+A++G EA + T+ V+
Sbjct: 78 YVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVV 137
Query: 351 SACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPN 410
S + G ++E R+ F+ M + + + MV + + +MDEA L MP + N
Sbjct: 138 SGYAQNGMLEEARRVFDAMPERNAVS-----WNAMVAAYIQRRMMDEAKELFNMMPCR-N 191
Query: 411 DAVLGSLLLG 420
A ++L G
Sbjct: 192 VASWNTMLTG 201
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H ++I G+ ++ LLA Y G + +A FE+ E WN MI G+AR
Sbjct: 279 QLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHG 338
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
++++ ++ M T+PD+ T +L+ C+ GL +G
Sbjct: 339 FGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKG 378
>gi|91806359|gb|ABE65907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 555
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 174/553 (31%), Positives = 286/553 (51%), Gaps = 92/553 (16%)
Query: 54 ILAKLLAFYVTSGYLINAHKVFE-KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDK 112
I K L ++ + A K+F+ + + + + N MI+ + + S LY+ + K
Sbjct: 12 IFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDL-RK 70
Query: 113 ET--EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGEC 170
ET PD +T++ L C+ +G Q+H ++ G+C+++++ T ++++Y G
Sbjct: 71 ETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGK-- 128
Query: 171 GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP---------------- 214
+GCAR FD+MP RS VSW +L+ GY++ G++D A K+FD+MP
Sbjct: 129 -MGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFV 187
Query: 215 ----------------HRNVVSWTTMISG-C----------------------------- 228
H+ V++WTTMI G C
Sbjct: 188 KSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGG 247
Query: 229 -AQNGKSRQALSLFNEMR-RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVG 286
QN + ++ ++LF EM+ + D V +++ L A ++ G L LG+W H +V+
Sbjct: 248 YCQNKQPQEGITLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRK---- 303
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--- 343
+ V + A++ MY+ CGEIE+A +F +M + SW +MI G+A G A+ AL
Sbjct: 304 KLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLF 363
Query: 344 -----------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRA 392
+T L V++AC+HGG V+EGR++F M + G+ +IEHYGCMVDL RA
Sbjct: 364 VTMMIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMRE-MGLNAKIEHYGCMVDLLGRA 422
Query: 393 GLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLAL 452
G + EA L+ NMP +PN +L S L C + + E A ++ +K V E++P+ Y+ L
Sbjct: 423 GSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAV-ELEPQNDGNYV-L 480
Query: 453 VANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKT 512
+ N+YAA KRW D V+ M K +K G S ++IN ++ +F++GD+T+ I+
Sbjct: 481 LRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLV 540
Query: 513 LGEITMQAMQEGY 525
LG++ M +E Y
Sbjct: 541 LGDLLMHMNEEKY 553
>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 164/513 (31%), Positives = 266/513 (51%), Gaps = 62/513 (12%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGH 93
+ L Q H+ +++ G + +L KLL +G + ++F +P + ++N +I+
Sbjct: 24 RRLQQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKAS 83
Query: 94 ARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNV 153
++ +V Y++M+ P YT++ ++ CA L G VH V SGY S+
Sbjct: 84 SKFGFSLDAVLFYRRMLLSRIVPSTYTFTSVIKACADLSLLCIGTLVHSHVFVSGYASDS 143
Query: 154 FIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
F++ L+ Y S C AR K+FDEM
Sbjct: 144 FVQAALIAFYAKS---CTPRVAR-------------------------------KVFDEM 169
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK 273
P R++V+W +MISG QNG + +A+ +FN+MR +RV D V+ LSAC+++G L G
Sbjct: 170 PQRSIVAWNSMISGYEQNGLANEAVEVFNKMRESRVEPDSATFVSVLSACSQLGSLDFGC 229
Query: 274 WIHSYVEENFSVGREPVL-VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
W+H + VG + V L +L++M++ CG++ A VF M N V WT+MI+G
Sbjct: 230 WLHDCI-----VGSGITMNVVLATSLVNMFSRCGDVGRARAVFYSMIEGNVVLWTAMISG 284
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
+ GY EA+ +TF+ VLSAC+H G +DEGR F M Q +G+ P
Sbjct: 285 YGMHGYGVEAMEVFHRMKARGVVPNSVTFVAVLSACAHAGLIDEGRSVFASMKQEYGVVP 344
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNM---PMKPNDAVLGSLLLGCRIHNNAELASQVA 434
+EH+ CMVD+F R GL++EA+ V+ + + P AV ++L C++H N +L +VA
Sbjct: 345 GVEHHVCMVDMFGRGGLLNEAYQFVKGLNSDELVP--AVWTAMLGACKMHKNFDLGVEVA 402
Query: 435 QKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLH 494
+ L+ +PE G+ L++N+YA A R V +VR MI+ G++K G S + ++ +
Sbjct: 403 ENLI-NAEPEN-PGHYVLLSNMYALAGRMDRVESVRNVMIQRGLKKQVGYSTIDVDNRSY 460
Query: 495 DFVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
F GD ++ + + IY L E+ + GY P
Sbjct: 461 LFSMGDKSHPETNEIYCFLDELIWRCKDAGYAP 493
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 129/251 (51%), Gaps = 16/251 (6%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
ML+ I+P+ T + + SLL I TL +HS + ++G++ +++ A L+A
Sbjct: 99 MLLSRIVPST-YTFTSVIKACADLSLLCI----GTL--VHSHVFVSGYASDSFVQAALIA 151
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
FY S A KVF++ S WN MI G+ ++ ++V ++ +M + EPD T
Sbjct: 152 FYAKSCTPRVARKVFDEMPQRSIVAWNSMISGYEQNGLANEAVEVFNKMRESRVEPDSAT 211
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLF 179
+ +LS C++ G G +H ++ SG NV + T+L+N++ CG VG AR +F
Sbjct: 212 FVSVLSACSQLGSLDFGCWLHDCIVGSGITMNVVLATSLVNMF----SRCGDVGRARAVF 267
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR----NVVSWTTMISGCAQNGKSR 235
M +VV W +++ GY G A ++F M R N V++ ++S CA G
Sbjct: 268 YSMIEGNVVLWTAMISGYGMHGYGVEAMEVFHRMKARGVVPNSVTFVAVLSACAHAGLID 327
Query: 236 QALSLFNEMRR 246
+ S+F M++
Sbjct: 328 EGRSVFASMKQ 338
>gi|218189919|gb|EEC72346.1| hypothetical protein OsI_05579 [Oryza sativa Indica Group]
Length = 545
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 167/505 (33%), Positives = 274/505 (54%), Gaps = 27/505 (5%)
Query: 26 LLQIRNTTKTLFQIHSQIIINGF-SQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTA 84
LL T + L +IH+Q + +G + I K+ Y G +A ++F++ +P
Sbjct: 26 LLTQCKTIRELQRIHAQALTHGLHPNQQSISCKIFRSYAEFGRPADAGRLFDEIPHPDII 85
Query: 85 IWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRV 144
+ ++ H + + K++ ++ I PD + LS G R G VHG +
Sbjct: 86 SFTSLMSLHLKLDHHWKAISVFSHAIASGHRPDGFAAVGALSASGGLGDQRIGSVVHGLI 145
Query: 145 LASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDI 203
G S + + L+++Y CG AR +FD M + V+W S+L GY+K +
Sbjct: 146 FRCGLDSELVVCNALVDMYC----RCGKFEPARTVFDRMLVKDEVTWGSMLYGYMKCVGV 201
Query: 204 DGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSAC 263
D A F +MP ++ VSWT +I+G Q+ + QAL LF +M + + +V LSAC
Sbjct: 202 DSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNHITIVGVLSAC 261
Query: 264 AEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNT 323
A+IG L LG+ IH Y ++ + + + NAL+ MYA G I A+ VF ++Q ++
Sbjct: 262 ADIGALDLGRAIHGYGSKSNATTN----IIVTNALMDMYAKSGSIASAFSVFEEVQMKDA 317
Query: 324 VSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFEC 368
+WT+MI+ F QG ++A+ +TF+ VLSACSH G + EGR+ F+
Sbjct: 318 FTWTTMISSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGLIQEGRELFDK 377
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAE 428
M + + I PR+EHYGCMVDL R GL++EA +L+ +M ++P+ + SLL C H N
Sbjct: 378 MREVYHIDPRLEHYGCMVDLLGRGGLLEEAEALIDHMDVEPDIVIWRSLLSACLAHGNDR 437
Query: 429 LASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
LA ++A K + + +P Y+ L+ N+YA + RW++ +R++M+ + K PG SW++
Sbjct: 438 LA-EIAGKEIIKREPGDDGVYV-LLWNMYALSNRWKEALDMRKQMLSRKIYKKPGCSWIE 495
Query: 489 INGVLHDFVAGDSTYKQASLIYKTL 513
++GV+H+F+ D ++ IY TL
Sbjct: 496 VDGVVHEFLVEDKSHDARREIYVTL 520
>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 294 bits (752), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 169/495 (34%), Positives = 267/495 (53%), Gaps = 58/495 (11%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H I+ G Q ++I L+ Y+ G + +A ++FE + W MI G +++
Sbjct: 269 VHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDC 328
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
+ +V ++++M+ P T + +L+ CA G F G VHG +L R
Sbjct: 329 ADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQ--------RIK 380
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
L D+P++ NSL+ Y K G ++ + +FD M R++
Sbjct: 381 L---------------------DIPSQ-----NSLVTMYAKCGHLEQSCSVFDRMSRRDI 414
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
VSW ++SG AQNG +AL LFNEMR+AR D + +V+ L ACA IG L GKWIH++
Sbjct: 415 VSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNF 474
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
V ++ +G P ++ ++ AL+ MY+ CG++ A F +M +++ VSW+S+I G+ G
Sbjct: 475 VTKS-CLG--PCIL-IDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGK 530
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
+ AL + +L +LSACSH G VD+G FF M +++GI+PR+EH
Sbjct: 531 GETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRA 590
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
C+VDL SRAG ++EA+S + M KP+ VLG LL CR N EL VA+++V + P
Sbjct: 591 CIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVI-LKP 649
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
A Y+ L A+ YA+ KRW V V +M + ++K PG S+++++G + F S++
Sbjct: 650 ANAGNYVQL-AHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSSH 708
Query: 504 KQAS---LIYKTLGE 515
Q L+ K LG
Sbjct: 709 PQFEEIMLVLKILGS 723
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 183/385 (47%), Gaps = 54/385 (14%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H+ +I GF + +L Y G + +A +FE + WN ++ G+A+
Sbjct: 168 LHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGN 227
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
+ + L +M EPD+ T+ L+S A G+ VHG +L +G + I T+
Sbjct: 228 IREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETS 287
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
L+ +YL K G+++ A++IF+ M H++V
Sbjct: 288 LIGMYL----------------------------------KCGNVNSAFRIFEGMMHKDV 313
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
+SWT MISG QN + A+++F M ++RV + + L+ACAE+G LG +H Y
Sbjct: 314 ISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGY 373
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ R + + N+L+ MYA CG +E++ VF +M RR+ VSW ++++G A+ G+
Sbjct: 374 ILRQ----RIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGH 429
Query: 339 AQEALLTF---------------LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
+ALL F + +L AC+ G + +G+ + ++ + P I
Sbjct: 430 LCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSC-LGPCILIDT 488
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMK 408
+VD++S+ G + A MP +
Sbjct: 489 ALVDMYSKCGDLGSAQKCFDRMPQQ 513
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 125/264 (47%), Gaps = 41/264 (15%)
Query: 80 NPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
NP+T +N +I + + + Y M+ +T PD +T+ L+ C LF G
Sbjct: 10 NPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLS 69
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVK 199
H RV+ GY S+ +I T+L+N Y K
Sbjct: 70 FHQRVIVDGYSSDSYIATSLINFY----------------------------------SK 95
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
G A K+FD M RNVV WTTMI + G+ A S++N MRR + V ++
Sbjct: 96 FGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGL 155
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
LS E+ L+ +H+ V + + G + V+L N+++++Y CG +E+A +F M
Sbjct: 156 LSGVLELVHLQC---LHACVIQ-YGFGSD---VALANSMLNVYCKCGRVEDAQALFELMD 208
Query: 320 RRNTVSWTSMITGFAKQGYAQEAL 343
R+ +SW S+++G+A+ G +E L
Sbjct: 209 ARDVISWNSLVSGYAQLGNIREVL 232
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 171/390 (43%), Gaps = 69/390 (17%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
H ++I++G+S +YI L+ FY G+ +A KVF+ ++ + W MI + R+
Sbjct: 68 LSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRA 127
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLS-----VCARCGLFREGEQVHGRVLASGYCS 151
+ + +Y M + +P T LLS V +C +H V+ G+ S
Sbjct: 128 GEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQC--------LHACVIQYGFGS 179
Query: 152 NVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIF 210
+V + +++N+Y +CG V A+ LF+ M AR V+SWNSL+ GY + G+I
Sbjct: 180 DVALANSMLNVYC----KCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNI------- 228
Query: 211 DEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLK 270
R+ L L M+ + DQ + +SA A L
Sbjct: 229 ------------------------REVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLG 264
Query: 271 LGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMI 330
+GK +H ++ G E + +LI MY CG + A+ +F M ++ +SWT+MI
Sbjct: 265 VGKMVHGHI---LRAGLEQD-SHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMI 320
Query: 331 TGFAKQGYAQEALLTF---------------LGVLSACSHGGFVDEGRQFFECMNQNWGI 375
+G + A A+ F VL+AC+ G G + + I
Sbjct: 321 SGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQ-RI 379
Query: 376 KPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
K I +V ++++ G ++++ S+ M
Sbjct: 380 KLDIPSQNSLVTMYAKCGHLEQSCSVFDRM 409
>gi|224126329|ref|XP_002329527.1| predicted protein [Populus trichocarpa]
gi|222870236|gb|EEF07367.1| predicted protein [Populus trichocarpa]
Length = 377
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 147/371 (39%), Positives = 233/371 (62%), Gaps = 27/371 (7%)
Query: 170 CGVGC---ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMIS 226
C GC AR +FD+MP ++V+ W S++ GYV G++D A ++F+ P ++VV WT MI+
Sbjct: 3 CKCGCLSVARKIFDEMPHKNVICWTSMVSGYVNYGELDKARELFERSPVKDVVLWTAMIN 62
Query: 227 GCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVG 286
G Q +A++LF EM+ RV D+ LVA L+ CA++G L+ G WIH Y++E
Sbjct: 63 GYVQFNHFDEAVALFQEMQIQRVKPDKFVLVALLTGCAQMGALEQGTWIHGYIDEKGI-- 120
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--- 343
PV + +LI MY+ CG IE+A +F ++ ++T +WTS+I G A G +AL
Sbjct: 121 --PVDAVVGTSLIEMYSKCGCIEKALRIFCGLREKDTATWTSIICGLAMNGKTSKALELF 178
Query: 344 ------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSR 391
+TF+GVLSACSHGG V+EGR+FF M + I+P++EHYGC++DL R
Sbjct: 179 SKMKQVEAIPDEVTFIGVLSACSHGGLVEEGREFFNSMTSIYNIEPKLEHYGCLIDLLGR 238
Query: 392 AGLMDEAFSLVQNMPMKPNDAVL---GSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAG 448
AG +DEA L++ + N+ ++ GSLL CRI+ N ++ +VA++LV +I+ ++
Sbjct: 239 AGQLDEAEELIKKIVNANNEIIVPLYGSLLSACRIYKNVQMGERVAEQLV-KIESRDSSV 297
Query: 449 YLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASL 508
+ L+AN+YA+A RW DV VR++M +GV+K PG S ++++G++H+F+ G+ + +
Sbjct: 298 H-TLLANIYASAGRWVDVNRVRREMKDLGVKKVPGCSSIEVDGIVHEFLVGNPSCSEMRE 356
Query: 509 IYKTLGEITMQ 519
IY L + +
Sbjct: 357 IYSMLDRMRLD 367
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 134/281 (47%), Gaps = 38/281 (13%)
Query: 44 IINGFSQKNYIL-AKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKS 102
I + KN I +++ YV G L A ++FE++ +W MI G+ + +++
Sbjct: 14 IFDEMPHKNVICWTSMVSGYVNYGELDKARELFERSPVKDVVLWTAMINGYVQFNHFDEA 73
Query: 103 VYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNL 162
V L+++M + +PD++ LL+ CA+ G +G +HG + G
Sbjct: 74 VALFQEMQIQRVKPDKFVLVALLTGCAQMGALEQGTWIHGYIDEKG-------------- 119
Query: 163 YLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWT 222
+P +VV SL++ Y K G I+ A +IF + ++ +WT
Sbjct: 120 -------------------IPVDAVVG-TSLIEMYSKCGCIEKALRIFCGLREKDTATWT 159
Query: 223 TMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEEN 282
++I G A NGK+ +AL LF++M++ D+V + LSAC+ G ++ G+ + +
Sbjct: 160 SIICGLAMNGKTSKALELFSKMKQVEAIPDEVTFIGVLSACSHGGLVEEGREFFNSMTSI 219
Query: 283 FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNT 323
+++ EP L LI + G+++EA + +K+ N
Sbjct: 220 YNI--EPKLEHY-GCLIDLLGRAGQLDEAEELIKKIVNANN 257
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
IH I G + L+ Y G + A ++F TA W +I G A +
Sbjct: 111 IHGYIDEKGIPVDAVVGTSLIEMYSKCGCIEKALRIFCGLREKDTATWTSIICGLAMNGK 170
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
K++ L+ +M E PDE T+ +LS C+ GL EG +
Sbjct: 171 TSKALELFSKMKQVEAIPDEVTFIGVLSACSHGGLVEEGRE 211
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 28/124 (22%)
Query: 301 MYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVD 360
MY CG + A +F +M +N + WTSM++G+ G +D
Sbjct: 1 MYCKCGCLSVARKIFDEMPHKNVICWTSMVSGYVNYGE--------------------LD 40
Query: 361 EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM---KPNDAVLGSL 417
+ R+ FE +K + + M++ + + DEA +L Q M + KP+ VL +L
Sbjct: 41 KARELFE----RSPVKDVV-LWTAMINGYVQFNHFDEAVALFQEMQIQRVKPDKFVLVAL 95
Query: 418 LLGC 421
L GC
Sbjct: 96 LTGC 99
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 164/512 (32%), Positives = 271/512 (52%), Gaps = 59/512 (11%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAF-YVTSGYLINAHKVFEKTENPSTAIWNQMIRG 92
K L QIH++III G + ++ KLL+F Y + + ++F P T +++ +I
Sbjct: 33 KPLQQIHARIIITGLGRTRSLITKLLSFAYAAASPISYTRRLFFSIPKPDTFLFHSLITL 92
Query: 93 HARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSN 152
++ P++S+ Y++M+ YT+S ++ A F GE +H V GY +
Sbjct: 93 TSKFSFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICGYGLD 152
Query: 153 VFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDE 212
+++ L++ Y K G + A K+FD+
Sbjct: 153 AYVQAALVSFY----------------------------------AKSGHVMIARKVFDK 178
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
MP + VV+W +MISG QNG ++A+ LF M+ V D V+ LSACA++G + LG
Sbjct: 179 MPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIGLG 238
Query: 273 KWIHSYVEEN-FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMIT 331
W+H Y+ N F + V L AL++MY+ CG + +A VF M+ +N V+WT+MI+
Sbjct: 239 FWVHEYIARNCFDLN-----VVLGTALMNMYSRCGNVSKAREVFDSMEEKNIVAWTAMIS 293
Query: 332 GFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIK 376
G+ G+ +A+ +TF+ VLSAC+H G VDEGRQ F M Q +G+
Sbjct: 294 GYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACAHAGLVDEGRQIFTTMKQEYGLV 353
Query: 377 PRIEHYGCMVDLFSRAGLMDEAFSLVQNM-PMKPNDAVLGSLLLGCRIHNNAELASQVAQ 435
P +EH CMVD+ RAG ++EA+ ++N P +P AV ++L C++H N +L +VA+
Sbjct: 354 PSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWTAMLGACKMHKNFDLGVEVAE 413
Query: 436 KLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHD 495
L++ I+PE G+ +++N+YA A R V +R MI+ ++K G S + ++ ++
Sbjct: 414 HLLS-IEPEN-PGHYVMLSNIYALAGRMDRVEKIRNIMIRNRLKKEVGYSTIDVDHKVYL 471
Query: 496 FVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
F GD ++ + + IY L E+ + + GY P
Sbjct: 472 FSMGDKSHPKTNQIYLYLDELMSRCREAGYIP 503
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 178/554 (32%), Positives = 283/554 (51%), Gaps = 61/554 (11%)
Query: 5 EIIPANPATSSKALTTRQIF--SLLQIRNTTKTL---FQIHSQIIINGFSQKNYILAKLL 59
++IP + S + + + SLL+ + K L Q+H+++ G + + KL+
Sbjct: 41 QLIPQHKVDSFPSSPSNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLV 100
Query: 60 AFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEY 119
FY L NAH +F+K + +WN +IR +A + E ++ LY QM++ +PD +
Sbjct: 101 NFYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNF 160
Query: 120 TYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLF 179
T F+L C+ EG +H RV+ SG+ +VF+ L+++Y G C V AR +F
Sbjct: 161 TLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCG--CVVD-ARHVF 217
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
D + R V WNS+L Y AQNG ++LS
Sbjct: 218 DKIVDRDAVLWNSMLAAY-------------------------------AQNGHPDESLS 246
Query: 240 LFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY-VEENFSVGREPVLVSLNNAL 298
L EM V + LV +S+ A+I L G+ IH + F + + AL
Sbjct: 247 LCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDK-----VKTAL 301
Query: 299 IHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------------L 344
I MYA CG ++ A +F +++ + VSW ++ITG+A G A EAL +
Sbjct: 302 IDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKEAQPDHI 361
Query: 345 TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQN 404
TF+G L+ACS G +DEGR + M ++ I P +EHY CMVDL G +DEA+ L++
Sbjct: 362 TFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQ 421
Query: 405 MPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQ 464
M + P+ V G+LL C+ H N ELA +KL+ E++P+ + Y+ L AN+YA + +W+
Sbjct: 422 MDVMPDSGVWGALLNSCKTHGNVELAEVALEKLI-ELEPDDSGNYVIL-ANMYAQSGKWE 479
Query: 465 DVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEG 524
VA +RQ MI G++K SW+++ ++ F++GD ++ + IY L + + G
Sbjct: 480 GVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKRLEGLMREAG 539
Query: 525 YKPDISELFLGIEE 538
Y PD +F +EE
Sbjct: 540 YVPDTGSVFHDVEE 553
>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 602
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 169/550 (30%), Positives = 284/550 (51%), Gaps = 62/550 (11%)
Query: 12 ATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINA 71
+ S+ + LL +T +L Q + ++ +G + +L +L A ++ +
Sbjct: 14 SPSAARAAEQHCLRLLAASSTPTSLLQSVAFLLKSGLHANSLVLTRLFAASASAAPAL-L 72
Query: 72 HKVFEKTENPSTAI----WNQMIRGHARSETPE---KSVYLYKQMIDKETEPDEYTYSFL 124
+ PS + N +IR HA S ++ + M+ P+++T+ FL
Sbjct: 73 DPLVTALLRPSVPLDAFLANTLIRAHATSPIHSLRLRAAAFFPLMLRGAVVPNKFTFPFL 132
Query: 125 LSVCARC-GLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMP 183
L CA G G Q H L G+ ++ ++ L+++Y GG
Sbjct: 133 LKACAALPGSPDVGLQAHAAALKFGFATDQYVSNTLIHMYSCFGG--------------- 177
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
G + A +FD MP + V+W+ MI G + G S A+ LF E
Sbjct: 178 -----------------GFLGDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVDLFRE 220
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
M+ V D+V ++ L+A ++G L+L +W+ +VE +G+ V+L NALI A
Sbjct: 221 MQANGVQADEVTVIGVLAAATDLGALELARWVRRFVERE-GIGKS---VTLCNALIDTLA 276
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLG 348
CG+++ A VF MQ+R+ VSWTS+I A +G +EA+ + F+G
Sbjct: 277 KCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIG 336
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
VL+ACSH G VDEG +F+ M +GI+P+IEHYGCMVD+F RAG+++ A V+ MP++
Sbjct: 337 VLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQ 396
Query: 409 PNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAA 468
PN + SL+ CR H EL + + L+ E P A Y+ +++NV+A +RW++ +
Sbjct: 397 PNPVIWRSLVSACRAHGRLELGESITRSLLHEY-PAHEANYI-MLSNVFALTQRWKEKSE 454
Query: 469 VRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
+R++M K G++K PG S V+++G +H+F+AGD ++ Q IY+ + E+ + + G+
Sbjct: 455 IRREMSKRGIKKVPGCSIVELDGEVHEFIAGDESHPQYKDIYRMVEEMARELRRVGHIAA 514
Query: 529 ISELFLGIEE 538
SE+ L ++E
Sbjct: 515 TSEVLLDLDE 524
>gi|212721478|ref|NP_001131178.1| uncharacterized protein LOC100192486 [Zea mays]
gi|194690792|gb|ACF79480.1| unknown [Zea mays]
Length = 617
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 179/548 (32%), Positives = 283/548 (51%), Gaps = 45/548 (8%)
Query: 21 RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTEN 80
R +LL L +H+ ++++G LA LA +S +L A V +
Sbjct: 7 RDPTTLLPSLAEASHLRALHAHLVVSGRLASPSHLAAFLASLASSNHLSYARLVL--PQR 64
Query: 81 PSTAI-WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL-------------- 125
P+T + N IR AR P + ++ D PD Y+ +FL+
Sbjct: 65 PATLLAHNAFIRALARGPRPCLAFAAFR---DLPLPPDHYSLNFLVRAATALVASAAEEK 121
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPAR 185
V A + HG + G+ ++ +++ ++++Y G V +R F ++
Sbjct: 122 HVSAEVNARLQAVSAHGAAVRWGHAADPHVQSGVLSMYAALGD---VASSRAAFAEIACP 178
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
VV +++ GD+D A +FD MP R+ V+W+ MI+G G+SR+AL LF+EM
Sbjct: 179 DVVCVTAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEML 238
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC 305
A + + LV+ L+ACA+IG L GKW+H YV S G + + + L AL+ MY+ C
Sbjct: 239 SAGTTVGEATLVSVLTACAQIGTLDRGKWVHWYVR---SRGMQ-MSIKLGTALVDMYSKC 294
Query: 306 GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVL 350
G + A VF M RN +WTS ++G A G E L ++F+ VL
Sbjct: 295 GAVVTAMEVFESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVL 354
Query: 351 SACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPN 410
CS G VDEGR F+ M++ +G+ P EHYGCMVDL+ RAG +D+A S + +MPM+P+
Sbjct: 355 RGCSMAGLVDEGRACFDSMDK-YGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPH 413
Query: 411 DAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVR 470
+ V G+LL RIHN+ +L KL+A I+ E A ++ L +N+YA ++ W+ V+ VR
Sbjct: 414 EGVWGALLNASRIHNSVDLGKYALDKLLA-IESENDAAHVQL-SNIYAESQNWKGVSRVR 471
Query: 471 QKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
M GV+K PG S ++++G +H+F G + + + I L E+ + +GY +
Sbjct: 472 GMMKAKGVKKVPGWSTIEVDGKVHEFYVGGRLHPRYNEIELMLAEMDRRLRLQGYTANTR 531
Query: 531 ELFLGIEE 538
E+ IEE
Sbjct: 532 EVLFDIEE 539
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 167/538 (31%), Positives = 283/538 (52%), Gaps = 73/538 (13%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
LL+ Y SG + N F++ + +N I G + + P++S+ L+K+M + EP
Sbjct: 95 LLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPT 154
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCAR 176
EYT +L+ A+ R G+Q+HG ++ + NVFI L ++Y +CG + AR
Sbjct: 155 EYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMY----AKCGEIEQAR 210
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGD---------------------------------- 202
LFD + +++VSWN ++ GY K G
Sbjct: 211 WLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCG 270
Query: 203 -IDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALS 261
+D A ++F E +++V WT M+ G A+NG+ AL LFNEM + D L + +S
Sbjct: 271 RVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVS 330
Query: 262 ACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN------ALIHMYASCGEIEEAYGVF 315
+CA++ L G+ +H + +L LNN ALI MY+ CG I++A VF
Sbjct: 331 SCAKLASLHHGQAVHG----------KSILAGLNNNLLVSSALIDMYSKCGFIDDARSVF 380
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVD 360
M RN VSW +MI G A+ G+ ++AL +TF+G+LSAC H +++
Sbjct: 381 NLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIE 440
Query: 361 EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
+G+++F+ ++ G+ P ++HY CMV+L R G +++A +L++NM P+ + +LL
Sbjct: 441 QGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSI 500
Query: 421 CRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRK 480
C + + ++VA + + E+DP A Y+ L +N+YA+ RW+DVA+VR M V+K
Sbjct: 501 CSTKGDI-VNAEVAARHLFELDPTIAVPYIML-SNMYASMGRWKDVASVRNLMKSKNVKK 558
Query: 481 PPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
G SW++I+ +H F + D T+ ++ IY+ L + + +EG+ P+ + + + E
Sbjct: 559 FAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGE 616
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 173/355 (48%), Gaps = 43/355 (12%)
Query: 101 KSVYLYKQMID----KETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGY-CSNVFI 155
K+ + +Q +D + T E Y+ L+ C R + +++ + + ++ F+
Sbjct: 2 KAKSMLRQSVDLLCSRSTATSE-AYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFL 60
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
L++LY G + A+ LFD M R SWN+LL Y K G I FD MP
Sbjct: 61 HNQLLHLYAKFGK---LRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPF 117
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
R+ VS+ T I+G + N +++L LF M+R + +V+ L+A A++ DL+ GK I
Sbjct: 118 RDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQI 177
Query: 276 H-SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
H S + NF +G V + NAL MYA CGEIE+A +F + ++N VSW MI+G+A
Sbjct: 178 HGSIIVRNF-LGN----VFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYA 232
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
K G ++ + +T +++A G VDE R+ F + I
Sbjct: 233 KNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKE-----KDI 287
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNM---PMKPNDAVLGSLLLGCRIHNNAELAS 431
+ M+ +++ G ++A L M ++P+ L S++ C A+LAS
Sbjct: 288 VCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSC-----AKLAS 337
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 140/298 (46%), Gaps = 40/298 (13%)
Query: 42 QIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEK 101
Q+ ++G ++ ++A Y G + A +VF + + W M+ G+A++ E
Sbjct: 246 QMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREED 305
Query: 102 SVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMN 161
++ L+ +M+ + EPD YT S ++S CA+ G+ VHG+ + +G +N+ + + L++
Sbjct: 306 ALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALID 365
Query: 162 LYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVS 220
+Y +CG + AR +F+ MP R+VVSWN++
Sbjct: 366 MY----SKCGFIDDARSVFNLMPTRNVVSWNAM--------------------------- 394
Query: 221 WTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVE 280
I GCAQNG + AL LF M + + D V + LSAC ++ G+ +
Sbjct: 395 ----IVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSIS 450
Query: 281 ENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR-NTVSWTSMITGFAKQG 337
G P L ++++ G IE+A + + M + + W+++++ + +G
Sbjct: 451 NQH--GMTPTLDHY-ACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKG 505
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 7/139 (5%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
ML+E I P + SS + ++ SL + +H + I+ G + + + L+
Sbjct: 313 MLLEHIEPDSYTLSSVVSSCAKLASLHHGQ-------AVHGKSILAGLNNNLLVSSALID 365
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y G++ +A VF + WN MI G A++ + ++ L++ M+ ++ +PD T
Sbjct: 366 MYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVT 425
Query: 121 YSFLLSVCARCGLFREGEQ 139
+ +LS C C +G++
Sbjct: 426 FIGILSACLHCNWIEQGQE 444
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 183/587 (31%), Positives = 290/587 (49%), Gaps = 88/587 (14%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGH 93
K L +H+ II+G+ ++ + L+ Y ++ A KVF+ T +WN MI G
Sbjct: 125 KHLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGL 184
Query: 94 ARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGY---- 149
++ + S+ L+++M+ D T + +L A + G + L G+
Sbjct: 185 VKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCD 244
Query: 150 ------------CSNV------FIRTNLMNL---------YLMSGG-ECGVGCAR-LLF- 179
C +V F R N +L + +GG EC V R LLF
Sbjct: 245 YVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFS 304
Query: 180 -DDMPARSVVSWNSL------------LKGY-VKRG-------------------DIDGA 206
+ + + ++V L + G+ VK G +ID A
Sbjct: 305 GERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLA 364
Query: 207 WKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEI 266
+FDE P + VV+W MISG QNG + A+SLF EM + + V + LSACA++
Sbjct: 365 RHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQL 424
Query: 267 GDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSW 326
G L GKW+H ++ S EP + ++ AL+ MYA CG I EA+ +F M +NTV+W
Sbjct: 425 GSLSFGKWVHHLIK---SENLEPN-IYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTW 480
Query: 327 TSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQ 371
+MI G+ GY EAL +TFL VL ACSH G V EG + F M
Sbjct: 481 NTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVN 540
Query: 372 NWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELAS 431
+ I+P IEHY CMVD+ R+G +++A ++ MP++P AV G+LL C IH + ++A
Sbjct: 541 KYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIAR 600
Query: 432 QVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQING 491
+++L E+DP + GY L++N+Y+ + + A++RQ + K + K PG + +++NG
Sbjct: 601 LASERLF-ELDP-GSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNG 658
Query: 492 VLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
H FV+GD ++ A+ IY L ++T + + GY+ + +EE
Sbjct: 659 TPHVFVSGDRSHSHATDIYAKLEKLTGKMREMGYQAETVPALHDVEE 705
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 148/325 (45%), Gaps = 42/325 (12%)
Query: 14 SSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHK 73
SS L+ +FSL+ +T L Q H+Q I+NG+ L KL +A
Sbjct: 6 SSGKLSRNTLFSLINKASTFPHLAQTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARA 65
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQM-IDKETEPDEYTYSFLLSVCARCG 132
+F P ++N ++RG + +++P S+ LY + + PD +TY+F ++ C+
Sbjct: 66 LFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSND- 124
Query: 133 LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNS 192
+ +H + GY SNVF+ + L++LY V AR +FD MP R V WN+
Sbjct: 125 --KHLMLLHAHSIIDGYGSNVFVGSALVDLYCKFS---RVVYARKVFDGMPERDTVLWNT 179
Query: 193 LLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLD 252
++ G VK D ++ LF EM V +D
Sbjct: 180 MINGLVKNCCFD-------------------------------DSIQLFREMVADGVRVD 208
Query: 253 QVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAY 312
+ A L A AE+ +LK+G I + G +++ LI +Y+ CG++ A
Sbjct: 209 SSTVTAVLPAAAELQELKVGMGIQC-LALKIGFGFCDYVLT---GLISLYSKCGDVNTAR 264
Query: 313 GVFRKMQRRNTVSWTSMITGFAKQG 337
+FR++ R + +++ +MI+GF G
Sbjct: 265 LLFRRINRPDLIAYNAMISGFTANG 289
>gi|242037745|ref|XP_002466267.1| hypothetical protein SORBIDRAFT_01g004770 [Sorghum bicolor]
gi|241920121|gb|EER93265.1| hypothetical protein SORBIDRAFT_01g004770 [Sorghum bicolor]
Length = 537
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 180/543 (33%), Positives = 284/543 (52%), Gaps = 44/543 (8%)
Query: 10 NPATSSKALTTRQIFSLLQIRNTTKTLFQ--IHSQIIINGFSQK-NYILAKLLAFYVTSG 66
+P T S R I SL L IH + G +++ LL+ Y G
Sbjct: 2 HPLTLSSTALLRLIKSLSPAAGPRAHLAAAAIHGLLFKEGLLHAGSHLPTALLSAYAALG 61
Query: 67 YLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLS 126
+A +F++ +P M R HA S +++ ++ M+ PD + L+
Sbjct: 62 RPRHARDLFDEMPDPGLVTRTAMARAHAASGQTAQALAVFGDMLADGVLPDNVALAVALA 121
Query: 127 VCARCGLF----------REGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCA 175
C G F R G+ VH ++ SG +VF+ T L+ LY GE G + +
Sbjct: 122 ACHGTGSFPAALGMAAARRPGKMVHALIVTSGIVPDVFVSTELIRLY----GEYGELLVS 177
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
R LFD MP +S VSWN+++ Y++ ++ A+++F MP R+VVSW T+I+G G+
Sbjct: 178 RRLFDAMPVKSTVSWNAMVHQYIRHSNVGDAYELFLAMPKRDVVSWNTIIAGYCLIGRFM 237
Query: 236 QALSLFNEMRRAR---VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLV 292
+AL LF +M V + + L+ACA G L+ G W+H+Y++ N R
Sbjct: 238 EALELFRQMMSPSSCPVHPNGPTISTVLAACAGAGCLETGIWVHAYIDRN----RMNDDG 293
Query: 293 SLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQGYAQEAL-------- 343
SL+ +LI MYA CG IE+A VF K +R+ SWT++I G A G A +AL
Sbjct: 294 SLDRSLIDMYAKCGSIEKALQVFEKAPGKRDLYSWTTVICGLAMHGKAADALRMFGMMQD 353
Query: 344 -------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMD 396
+T +GVL+AC+HGG VDEG F + + + I P+IEHYGC++DL R G +
Sbjct: 354 NGIRPDDVTLVGVLNACAHGGLVDEGLHHFYSL-EKYAITPKIEHYGCVIDLLGRVGRLQ 412
Query: 397 EAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANV 456
EA+S+++ M MKPN + G+ L C++H+N EL A +L +DP+ + +++++
Sbjct: 413 EAYSIIRTMRMKPNAVIWGAFLNACKVHSNVELGEIAAAELT-RLDPDDPWAKV-MLSSL 470
Query: 457 YAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEI 516
YA A+ W +A R++M + ++K PG S ++++G +H+FVAG + Q I L +
Sbjct: 471 YAKAQDWSSLARERREMNSLQMKKTPGCSSIELDGEVHEFVAGSFQHPQHGEICTVLENV 530
Query: 517 TMQ 519
Q
Sbjct: 531 EAQ 533
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 168/517 (32%), Positives = 268/517 (51%), Gaps = 58/517 (11%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H + F + LL Y L+ A K+F+ + W+ MI G+ S+
Sbjct: 232 LHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDC 291
Query: 99 PEKSVYLYKQMIDKET-EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++++ L+ QMI K+ +P T +L CA+ G ++H ++ G ++ +
Sbjct: 292 MKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLG- 350
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
N+LL Y K G ID A + FD M ++
Sbjct: 351 ---------------------------------NTLLSMYAKCGVIDDAIRFFDXMNPKD 377
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VS++ ++SGC QNG + ALS+F M+ + + D ++ L AC+ + L+ G H
Sbjct: 378 SVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHG 437
Query: 278 Y-VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
Y + F+ + NALI MY+ CG+I A VF +M R + VSW +MI G+
Sbjct: 438 YLIVRGFATD-----TLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIH 492
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G EAL +TF+ +LS+CSH G V EGR +F+ M++++ I PR+EH
Sbjct: 493 GLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEH 552
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
CMVD+ RAGL+DEA ++NMP +P+ + +LL CRIH N EL +V++K + +
Sbjct: 553 CICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKK-IQSL 611
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
PE + G L++N+Y+AA RW D A +R G++K PG SW++ING++H FV GD
Sbjct: 612 GPE-STGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQ 670
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++ Q S I + L E+ ++ + GY+ + S +F +EE
Sbjct: 671 SHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEE 707
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 197/443 (44%), Gaps = 63/443 (14%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH + N + + +L KL Y++ ++ A ++F++ NPS +WNQ+IR +A +
Sbjct: 29 KIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNG 88
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+ ++ LY M+ P++YTY F+L C+ +G ++H G S+VF+ T
Sbjct: 89 PFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCT 148
Query: 158 NLMNLYLMSGGECGVGC-ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L++ Y +CG+ A+ LF M R VV+WN+
Sbjct: 149 ALVDFY----AKCGILVEAQRLFSSMSHRDVVAWNA------------------------ 180
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
MI+GC+ G A+ L +M+ + + +V L E L GK +H
Sbjct: 181 -------MIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALH 233
Query: 277 SY-VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
Y V +F G V + L+ MYA C + A +F M RN VSW++MI G+
Sbjct: 234 GYCVRRSFDNG-----VVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVX 288
Query: 336 QGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
+EAL +T VL AC+ + GR+ C G I
Sbjct: 289 SDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRK-LHCYIIKLGXVLDI 347
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAV-LGSLLLGCRIHNNAELASQVAQKL- 437
++ ++++ G++D+A M P D+V +++ GC + NA +A + + +
Sbjct: 348 LLGNTLLSMYAKCGVIDDAIRFFDX--MNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQ 405
Query: 438 VAEIDPEQAAGYLALVANVYAAA 460
++ IDP+ L A + AA
Sbjct: 406 LSGIDPDLTTMLGVLPACSHLAA 428
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 150/341 (43%), Gaps = 54/341 (15%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IHS + G ++ L+ FY G L+ A ++F + WN MI G +
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYG 189
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+ +V L QM ++ P+ T +L G+ +HG + + + V + T
Sbjct: 190 LCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGT 249
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y C LL+ A KIFD M RN
Sbjct: 250 GLLDMY--------AKCQCLLY--------------------------ARKIFDVMGVRN 275
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEM-RRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
VSW+ MI G + ++AL LF++M + + V L + L ACA++ DL G+ +H
Sbjct: 276 EVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLH 335
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
Y+ + V + + L N L+ MYA CG I++A F M +++VS++++++G +
Sbjct: 336 CYIIKLGXV----LDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQN 391
Query: 337 GYAQEA---------------LLTFLGVLSACSHGGFVDEG 362
G A A L T LGVL ACSH + G
Sbjct: 392 GNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHG 432
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/335 (19%), Positives = 136/335 (40%), Gaps = 48/335 (14%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
M++++ + P T L R L + K +H II G + LL+
Sbjct: 302 MILKDAMDPTPVTLGSVL--RACAKLTDLSRGRK----LHCYIIKLGXVLDILLGNTLLS 355
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y G + +A + F+ + ++ ++ G ++ ++ +++ M +PD T
Sbjct: 356 MYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTT 415
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLF 179
+L C+ + G HG ++ G+ ++ I L+++Y +CG + AR +F
Sbjct: 416 MLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMY----SKCGKISFAREVF 471
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
+ M +VSWN+++ GY +G +AL
Sbjct: 472 NRMDRHDIVSWNAMIIGY-------------------------------GIHGLGMEALG 500
Query: 240 LFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFS-VGREPVLVSLNNAL 298
LF+++ + D + + LS+C+ G + G+ + +FS V R + +
Sbjct: 501 LFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCI----CM 556
Query: 299 IHMYASCGEIEEAYGVFRKMQRRNTVS-WTSMITG 332
+ + G I+EA+ R M V W+++++
Sbjct: 557 VDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSA 591
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 85/196 (43%), Gaps = 21/196 (10%)
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
L AC + L K IH + +N S VL + L +Y SC ++ A +F ++
Sbjct: 15 LEACIQSKSLTEAKKIHQHFLKNTSNADSSVL----HKLTRLYLSCNQVVLARRLFDEIP 70
Query: 320 RRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQ 364
+ + W +I +A G A+ T+ VL ACS +++G +
Sbjct: 71 NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
+ +G++ + +VD +++ G++ EA L +M + + +++ GC ++
Sbjct: 131 IHS-HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGCSLY 188
Query: 425 NNAELASQVAQKLVAE 440
+ A Q+ ++ E
Sbjct: 189 GLCDDAVQLIMQMQEE 204
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/488 (32%), Positives = 260/488 (53%), Gaps = 55/488 (11%)
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
G++ AH +F T +P+ +WN +IRG++ S++P ++ LYK M P+ YT+ F+L
Sbjct: 15 GHVAYAHCIFSCTHHPNLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFVL 74
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPAR 185
+ C + EG+++H +++ +G + T L+N
Sbjct: 75 NACCKLLRLCEGQELHSQIVKAG----LDFETPLLN------------------------ 106
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
L+K Y G +D A +FDEMP + SW+TM+SG +QNG++ + L L EM+
Sbjct: 107 ------GLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYSQNGQAVETLKLLREMQ 160
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC 305
V D L + + C ++G L LGKW+HSY+++ + V L AL+ MY+ C
Sbjct: 161 AENVSSDAFTLASVVGVCGDLGVLDLGKWVHSYIDKE----GVKIDVVLGTALVGMYSKC 216
Query: 306 GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVL 350
G ++ A VF+ M R+ +W+ MI G+A G+ ++AL +TF VL
Sbjct: 217 GSLDNALKVFQGMAERDVTTWSIMIAGYAIHGHDEKALQLFDAMKRSKIIPNCVTFTSVL 276
Query: 351 SACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPN 410
SA SH G V++G Q FE M + I P+I+HYGCMVDLF RAG++ A +Q MP++PN
Sbjct: 277 SAYSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPN 336
Query: 411 DAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVR 470
+ +LL C+ H L +++K++ ++DP Y+ V+NVYA+ RW V VR
Sbjct: 337 VVLWRTLLGACKTHGYKGLGEHISRKIL-KLDPSSPENYV-FVSNVYASLGRWSSVCQVR 394
Query: 471 QKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
M + +K G S ++IN ++H F+ G+ ++ + IY L ++ + Q G+
Sbjct: 395 SLMKEKAPKKQHGWSSIEINFMVHKFIMGEESHPKREKIYGMLHQMARKLKQVGHVASTV 454
Query: 531 ELFLGIEE 538
++ I+E
Sbjct: 455 DVLHDIDE 462
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 106/212 (50%), Gaps = 9/212 (4%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++HSQI+ G + +L L+ Y G + A +F++ P +A W+ M+ G++++
Sbjct: 88 ELHSQIVKAGLDFETPLLNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYSQNG 147
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ L ++M + D +T + ++ VC G+ G+ VH + G +V + T
Sbjct: 148 QAVETLKLLREMQAENVSSDAFTLASVVGVCGDLGVLDLGKWVHSYIDKEGVKIDVVLGT 207
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L+ +Y +CG + A +F M R V +W+ ++ GY G + A ++FD M
Sbjct: 208 ALVGMY----SKCGSLDNALKVFQGMAERDVTTWSIMIAGYAIHGHDEKALQLFDAMKRS 263
Query: 217 ----NVVSWTTMISGCAQNGKSRQALSLFNEM 244
N V++T+++S + +G + +F M
Sbjct: 264 KIIPNCVTFTSVLSAYSHSGLVEKGHQIFETM 295
>gi|414880744|tpg|DAA57875.1| TPA: hypothetical protein ZEAMMB73_657034, partial [Zea mays]
Length = 1822
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 179/548 (32%), Positives = 283/548 (51%), Gaps = 45/548 (8%)
Query: 21 RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTEN 80
R +LL L +H+ ++++G LA LA +S +L A V +
Sbjct: 1212 RDPTTLLPSLAEASHLRALHAHLVVSGRLASPSHLAAFLASLASSNHLSYARLVL--PQR 1269
Query: 81 PSTAI-WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL-------------- 125
P+T + N IR AR P + ++ D PD Y+ +FL+
Sbjct: 1270 PATLLAHNAFIRALARGPRPCLAFAAFR---DLPLPPDHYSLNFLVRAATALVASAAEEK 1326
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPAR 185
V A + HG + G+ ++ +++ ++++Y G V +R F ++
Sbjct: 1327 HVSAEVNARLQAVSAHGAAVRWGHAADPHVQSGVLSMYAALGD---VASSRAAFAEIACP 1383
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
VV +++ GD+D A +FD MP R+ V+W+ MI+G G+SR+AL LF+EM
Sbjct: 1384 DVVCVTAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEML 1443
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC 305
A + + LV+ L+ACA+IG L GKW+H YV S G + + + L AL+ MY+ C
Sbjct: 1444 SAGTTVGEATLVSVLTACAQIGTLDRGKWVHWYVR---SRGMQ-MSIKLGTALVDMYSKC 1499
Query: 306 GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVL 350
G + A VF M RN +WTS ++G A G E L ++F+ VL
Sbjct: 1500 GAVVTAMEVFESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVL 1559
Query: 351 SACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPN 410
CS G VDEGR F+ M++ +G+ P EHYGCMVDL+ RAG +D+A S + +MPM+P+
Sbjct: 1560 RGCSMAGLVDEGRACFDSMDK-YGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPH 1618
Query: 411 DAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVR 470
+ V G+LL RIHN+ +L KL+A I+ E A ++ L +N+YA ++ W+ V+ VR
Sbjct: 1619 EGVWGALLNASRIHNSVDLGKYALDKLLA-IESENDAAHVQL-SNIYAESQNWKGVSRVR 1676
Query: 471 QKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
M GV+K PG S ++++G +H+F G + + + I L E+ + +GY +
Sbjct: 1677 GMMKAKGVKKVPGWSTIEVDGKVHEFYVGGRLHPRYNEIELMLAEMDRRLRLQGYTANTR 1736
Query: 531 ELFLGIEE 538
E+ IEE
Sbjct: 1737 EVLFDIEE 1744
>gi|15229345|ref|NP_187126.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207287|sp|Q9SR01.1|PP212_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04750, mitochondrial; Flags: Precursor
gi|6175175|gb|AAF04901.1|AC011437_16 hypothetical protein [Arabidopsis thaliana]
gi|332640610|gb|AEE74131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 661
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 182/503 (36%), Positives = 271/503 (53%), Gaps = 33/503 (6%)
Query: 21 RQIF-SLLQIRNTTKTLFQIHSQIIING-FSQKNYILAKLLAFYVTSGYLINAHKVFEKT 78
RQ F L++ + + QIH II++G S NY+ L+ FY+ G A KVF +
Sbjct: 133 RQTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARM 192
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE 138
+P + +N MI G+A+ +++ LY +M+ EPDEYT LL C R G+
Sbjct: 193 PHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGK 252
Query: 139 QVHGRVLASG--YCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLK 195
VHG + G Y SN+ + L+++Y +C G A+ FD M + + SWN+++
Sbjct: 253 GVHGWIERRGPVYSSNLILSNALLDMYF----KCKESGLAKRAFDAMKKKDMRSWNTMVV 308
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNG-KSRQALSLFNEMRRA-RVGLDQ 253
G+V+ GD++ A +FD+MP R++VSW +++ G ++ G R LF EM +V D+
Sbjct: 309 GFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDR 368
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
V +V+ +S A G+L G+W+H V G L++ALI MY CG IE A+
Sbjct: 369 VTMVSLISGAANNGELSHGRWVHGLVIRLQLKGD----AFLSSALIDMYCKCGIIERAFM 424
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGF 358
VF+ ++ WTSMITG A G Q+AL +T L VL+ACSH G
Sbjct: 425 VFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGL 484
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQ-NMPMKPNDAVLGSL 417
V+EG F M +G P EHYG +VDL RAG ++EA +VQ MPM+P+ ++ GS+
Sbjct: 485 VEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSI 544
Query: 418 LLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMG 477
L CR + E A +L+ +++PE+ GY+ L++N+YA RW R+ M G
Sbjct: 545 LSACRGGEDIETAELALTELL-KLEPEKEGGYV-LLSNIYATVGRWGYSDKTREAMENRG 602
Query: 478 VRKPPGQSWVQINGVLHDFVAGD 500
V+K G S V LH FVA +
Sbjct: 603 VKKTAGYSSVVGVEGLHRFVAAE 625
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 120/496 (24%), Positives = 212/496 (42%), Gaps = 116/496 (23%)
Query: 22 QIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFY-VTSGYLINAHKVF--EKT 78
Q LL+ N+ Q+ +QI+ + +++L+ F +T ++ K+ T
Sbjct: 36 QSLVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFT 95
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE 138
NP+ ++N MI A S + + LY MI PD T+ +L+ + E +
Sbjct: 96 PNPNVFVYNTMIS--AVSSSKNECFGLYSSMIRHRVSPDRQTFLYLMKASS---FLSEVK 150
Query: 139 QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYV 198
Q+H ++ SG S + YL WNSL+K Y+
Sbjct: 151 QIHCHIIVSGCLS--------LGNYL-------------------------WNSLVKFYM 177
Query: 199 KRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVA 258
+ G+ A K+F MPH +V S+ MI G A+ G S +AL L+ +M + D+ +++
Sbjct: 178 ELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLS 237
Query: 259 ALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVS---LNNALIHMYASC---------- 305
L C + D++LGK +H ++E R PV S L+NAL+ MY C
Sbjct: 238 LLVCCGHLSDIRLGKGVHGWIER-----RGPVYSSNLILSNALLDMYFKCKESGLAKRAF 292
Query: 306 ---------------------GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL- 343
G++E A VF +M +R+ VSW S++ G++K+G Q +
Sbjct: 293 DAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVR 352
Query: 344 ----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNW--GIKPRIEHYG-- 383
+T + ++S ++ G + GR W G+ R++ G
Sbjct: 353 ELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGR---------WVHGLVIRLQLKGDA 403
Query: 384 ----CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
++D++ + G+++ AF +V + + A+ S++ G H N + A Q+ ++
Sbjct: 404 FLSSALIDMYCKCGIIERAF-MVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQE 462
Query: 440 E-IDPEQAAGYLALVA 454
E + P L A
Sbjct: 463 EGVTPNNVTLLAVLTA 478
>gi|193806402|sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06145; AltName: Full=Protein EMBRYO DEFECTIVE 1444
Length = 577
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 175/568 (30%), Positives = 294/568 (51%), Gaps = 58/568 (10%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAH 72
++S +L + +++ +T K L + +I +Q ++ + + + L A
Sbjct: 21 SASLSLAPPNLKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAV 80
Query: 73 KVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCG 132
+ + P+ ++N + +G P +S+ LY +M+ P YTYS L+ +
Sbjct: 81 STMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFAS 140
Query: 133 LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSW-- 190
F E Q H + G+ +V I+T L++ Y +G + AR +FD+MP R ++W
Sbjct: 141 RFGESLQAH--IWKFGFGFHVKIQTTLIDFYSATGR---IREARKVFDEMPERDDIAWTT 195
Query: 191 -----------------------------NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSW 221
N L+ GY+ G+++ A +F++MP ++++SW
Sbjct: 196 MVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISW 255
Query: 222 TTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE 281
TTMI G +QN + R+A+++F +M + D+V + +SACA +G L++GK +H Y +
Sbjct: 256 TTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQ 315
Query: 282 NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQE 341
N V + V + +AL+ MY+ CG +E A VF + ++N W S+I G A G+AQE
Sbjct: 316 NGFV----LDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQE 371
Query: 342 AL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMV 386
AL +TF+ V +AC+H G VDEGR+ + M ++ I +EHYG MV
Sbjct: 372 ALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMV 431
Query: 387 DLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQA 446
LFS+AGL+ EA L+ NM +PN + G+LL GCRIH N +A KL+ ++P
Sbjct: 432 HLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMV-LEP-MN 489
Query: 447 AGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKP-PGQSWVQINGVLHDFVAGDSTYKQ 505
+GY L+ ++YA RW+DVA +R +M ++G+ K PG S ++I+ H F A D ++
Sbjct: 490 SGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSA 549
Query: 506 ASLIYKTLGEITMQAMQEGYKPDISELF 533
+ + L EI Q GY + ++
Sbjct: 550 SDEVCLLLDEIYDQMGLAGYVQETENVY 577
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 10/169 (5%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
M+ E IIP + T S ++ +L+I ++H + NGF YI + L+
Sbjct: 278 MMEEGIIP-DEVTMSTVISACAHLGVLEIGK------EVHMYTLQNGFVLDVYIGSALVD 330
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y G L A VF + WN +I G A ++++ ++ +M + +P+ T
Sbjct: 331 MYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVT 390
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGY--CSNVFIRTNLMNLYLMSG 167
+ + + C GL EG +++ R + Y SNV +++L+ +G
Sbjct: 391 FVSVFTACTHAGLVDEGRRIY-RSMIDDYSIVSNVEHYGGMVHLFSKAG 438
>gi|356573508|ref|XP_003554900.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Glycine max]
Length = 629
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 170/513 (33%), Positives = 280/513 (54%), Gaps = 35/513 (6%)
Query: 38 QIHSQIIING--FSQKNYILAKLLAFYVTSGYLINAHKVFEKT--ENPSTAIWNQMIRGH 93
Q+H+ ++G FS +++L LL Y + +A K+F++ + + + +IR
Sbjct: 33 QLHAAATVSGLLFSPSSFLLNALLHLYASCPLPSHARKLFDRIPHSHKDSVDYTALIR-- 90
Query: 94 ARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNV 153
P ++ Y QM + D L C++ G Q+H V+ G+ +
Sbjct: 91 --CSHPLDALRFYLQMRQRALPLDGVALICALGACSKLGDSNLVPQMHVGVVKFGFLRHT 148
Query: 154 FIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDE 212
+ +M+ Y+ +CG VG AR +F+++ SVVSW +L+G VK ++ +FDE
Sbjct: 149 KVLNGVMDGYV----KCGLVGEARRVFEEIEEPSVVSWTVVLEGVVKCEGVESGKVVFDE 204
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRA---RVGLDQVALVAALSACAEIGDL 269
MP RN V+WT +I G +G +++A L EM GL+ + L + LSAC++ GD+
Sbjct: 205 MPERNEVAWTVLIKGYVGSGFTKEAFLLLKEMVFGCGFGFGLNSITLCSVLSACSQSGDV 264
Query: 270 KLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSM 329
+G+W+H Y + +VG + + V + +L+ MYA CG I A VFR M RRN V+W +M
Sbjct: 265 SVGRWVHCYAVK--AVGWD-LGVMVGTSLVDMYAKCGRISAALMVFRHMPRRNVVAWNAM 321
Query: 330 ITGFAKQGYAQEAL--------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGI 375
+ G A G + + +TF+ +LS+CSH G V++G Q+F + + +GI
Sbjct: 322 LCGLAMHGMGKVVVEMFACMVEEVKPDAVTFMALLSSCSHSGLVEQGWQYFHDLERAYGI 381
Query: 376 KPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQ 435
+P IEHY CMVDL RAG ++EA LV+ +P+ PN+ VLGSLL C H L ++ +
Sbjct: 382 RPEIEHYACMVDLLGRAGRLEEAEDLVKKLPIPPNEVVLGSLLGACYAHGKLRLGEKIMR 441
Query: 436 KLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHD 495
+LV ++DP Y L++N+YA + ++R+ + G+RK PG S + ++G LH
Sbjct: 442 ELV-QMDPLNTE-YHILLSNMYALCGKADKANSLRKVLKNRGIRKVPGMSSIYVDGQLHR 499
Query: 496 FVAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
F+AGD ++ + + IY L ++ + GY P+
Sbjct: 500 FIAGDKSHPRTADIYMKLDDMICKLRLAGYVPN 532
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 155/382 (40%), Gaps = 91/382 (23%)
Query: 124 LLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMP 183
LL CAR R GEQ+H SG LLF
Sbjct: 18 LLRQCARASAVRPGEQLHAAATVSG----------------------------LLF---- 45
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP--HRNVVSWTTMISGCAQNGKSRQALSLF 241
+ S N+LL Y A K+FD +P H++ V +T +I + AL +
Sbjct: 46 SPSSFLLNALLHLYASCPLPSHARKLFDRIPHSHKDSVDYTALI----RCSHPLDALRFY 101
Query: 242 NEMRRARVGLDQVALVAALSACAEIGD-----------LKLGKWIHSYVEENFSVG---- 286
+MR+ + LD VAL+ AL AC+++GD +K G H+ V G
Sbjct: 102 LQMRQRALPLDGVALICALGACSKLGDSNLVPQMHVGVVKFGFLRHTKVLNGVMDGYVKC 161
Query: 287 -------------REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF 333
EP +VS ++ C +E VF +M RN V+WT +I G+
Sbjct: 162 GLVGEARRVFEEIEEPSVVSW-TVVLEGVVKCEGVESGKVVFDEMPERNEVAWTVLIKGY 220
Query: 334 AKQGYAQEALL------------------TFLGVLSACSHGGFVDEGR--QFFECMNQNW 373
G+ +EA L T VLSACS G V GR + W
Sbjct: 221 VGSGFTKEAFLLLKEMVFGCGFGFGLNSITLCSVLSACSQSGDVSVGRWVHCYAVKAVGW 280
Query: 374 GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQV 433
+ + +VD++++ G + A + ++MP + N ++L G +H ++ ++
Sbjct: 281 DLGVMVGTS--LVDMYAKCGRISAALMVFRHMPRR-NVVAWNAMLCGLAMHGMGKVVVEM 337
Query: 434 AQKLVAEIDPEQAAGYLALVAN 455
+V E+ P+ A ++AL+++
Sbjct: 338 FACMVEEVKPD-AVTFMALLSS 358
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 165/507 (32%), Positives = 268/507 (52%), Gaps = 56/507 (11%)
Query: 48 FSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYK 107
FS+++ LL Y G L +A VF + S + MI G+AR ++V L++
Sbjct: 327 FSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFE 386
Query: 108 QMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSG 167
+M ++ PD YT + +L+ CAR L EG++VH + + ++F+ LM++Y
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMY---- 442
Query: 168 GECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISG 227
K G + A +F EM ++++SW T+I G
Sbjct: 443 ------------------------------AKCGSMREAELVFSEMRVKDIISWNTVIGG 472
Query: 228 CAQNGKSRQALSLFNEMR-RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVG 286
++N + +ALSLFN + R D+ + L ACA + G+ IH Y+ N
Sbjct: 473 YSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 532
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--- 343
V N+L+ MYA CG + A +F + ++ VSWT MI G+ G+ +EA+
Sbjct: 533 DRHVA----NSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALF 588
Query: 344 ------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSR 391
++F+ +L ACSH G VDEG +FF M I+P +EHY C+VD+ +R
Sbjct: 589 NQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLAR 648
Query: 392 AGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLA 451
G + +A+ ++NMP+ P+ + G+LL GCRIH++ +LA +VA+K V E++PE GY
Sbjct: 649 TGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEK-VFELEPEN-TGYYV 706
Query: 452 LVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYK 511
L+AN+YA A++W++V +R+++ + G+RK PG SW++I G ++ FVAGDS+ + I
Sbjct: 707 LMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEA 766
Query: 512 TLGEITMQAMQEGYKPDISELFLGIEE 538
L + + ++EGY P + EE
Sbjct: 767 FLRGVRARMIEEGYSPLTKYALIDAEE 793
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 201/410 (49%), Gaps = 59/410 (14%)
Query: 18 LTTRQIFSLLQIRNTTKTLF---QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKV 74
+ R + S+LQ+ +K+L ++ + I NGF + + +KL Y G L A +V
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRV 151
Query: 75 FEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLF 134
F++ + WN ++ A+S S+ L+K+M+ E D YT+S + +
Sbjct: 152 FDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 135 REGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLL 194
GEQ+HG +L SG+ G VG NSL+
Sbjct: 212 NGGEQLHGYILKSGF-----------------GERNSVG-----------------NSLV 237
Query: 195 KGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQV 254
Y+K +D A K+FDEM R+V+SW ++I+G NG + + LS+F +M + + +D
Sbjct: 238 AFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLA 297
Query: 255 ALVAALSACAEIGDLKLGKWIHSY-VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
+V+ + CA+ + LG+ +H + V+ FS RE N L+ MY+ CG+++ A
Sbjct: 298 TIVSVFAGCADSRLISLGRAVHCFGVKACFS--REDRFC---NTLLDMYSKCGDLDSAKV 352
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF---------------LGVLSACSHGGF 358
VFR+M R+ VS+TSMI G+A++G A EA+ F VL+ C+
Sbjct: 353 VFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRL 412
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
+DEG++ E + +N + I ++D++++ G M EA + M +K
Sbjct: 413 LDEGKRVHEWIKEN-DMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVK 461
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 210/441 (47%), Gaps = 63/441 (14%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H I+ +GF ++N + L+AFY+ + + +A KVF++ WN +I G+ +
Sbjct: 216 QLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNG 275
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
EK + ++ QM+ E D T + + CA L G VH C V
Sbjct: 276 LAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVH--------CFGV---- 323
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
+ F +R N+LL Y K GD+D A +F EM R+
Sbjct: 324 ------------------KACF----SREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRS 361
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VVS+T+MI+G A+ G + +A+ LF EM + D + A L+ CA L GK +H
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHE 421
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
+++EN +G + + ++NAL+ MYA CG + EA VF +M+ ++ +SW ++I G++K
Sbjct: 422 WIKEN-DMGFD---IFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNC 477
Query: 338 YAQEALLTF----------------LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
YA EAL F VL AC+ D+GR+ + +N R
Sbjct: 478 YANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR-HV 536
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLL-GCRIHN-NAELASQVAQKLVA 439
+VD++++ G + A L ++ K D V ++++ G +H E + Q A
Sbjct: 537 ANSLVDMYAKCGALLLARLLFDDITSK--DLVSWTVMIAGYGMHGFGKEAIALFNQMRQA 594
Query: 440 EIDPEQAAGYLALVANVYAAA 460
I+P++ ++ V+ +YA +
Sbjct: 595 GIEPDE----ISFVSLLYACS 611
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH I+ NG+ ++ L+ Y G L+ A +F+ + W MI G+
Sbjct: 520 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHG 579
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
++++ L+ QM EPDE ++ LL C+ GL EG
Sbjct: 580 FGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEG 619
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 164/515 (31%), Positives = 273/515 (53%), Gaps = 56/515 (10%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H ++ + F I LL Y G L A ++F++ + W MI G+A+++
Sbjct: 96 VHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDR 155
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
++ L+ +M+ EP+E+T S L+ C + G Q+H G SNVF+ ++
Sbjct: 156 ASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSS 215
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
L+++Y CG + A +FD++ +N
Sbjct: 216 LVDMY----ARCGY------------------------------LGEAMLVFDKLGCKNE 241
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
VSW +I+G A+ G+ +AL+LF M+R + A LS+C+ +G L+ GKW+H++
Sbjct: 242 VSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAH 301
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ ++ + ++ + N L+HMYA G I +A VF K+ + + VS SM+ G+A+ G
Sbjct: 302 LMKS----SQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGL 357
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
+EA +TFL VL+ACSH +DEG+ +F M + + I+P++ HY
Sbjct: 358 GKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRK-YNIEPKVSHYA 416
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
+VDL RAGL+D+A S ++ MP++P A+ G+LL ++H N E+ + AQ+ V E+DP
Sbjct: 417 TIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQR-VFELDP 475
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
G L+AN+YA+A RW+DVA VR+ M GV+K P SWV++ +H FVA D +
Sbjct: 476 SYP-GTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAH 534
Query: 504 KQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
Q I+K ++ + + GY PD S + L +++
Sbjct: 535 PQKEKIHKMWEKLNQKIKEIGYVPDTSHVLLFVDQ 569
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 105/216 (48%), Gaps = 7/216 (3%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH+ G ++ + L+ Y GYL A VF+K + WN +I G+AR
Sbjct: 196 QIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKG 255
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E+++ L+ +M + P E+TYS LLS C+ G +G+ +H ++ S ++
Sbjct: 256 EGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGN 315
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM---- 213
L+++Y SG + A +FD + VVS NS+L GY + G A + FDEM
Sbjct: 316 TLLHMYAKSG---SIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFG 372
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARV 249
N +++ ++++ C+ + F MR+ +
Sbjct: 373 IEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNI 408
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 179/542 (33%), Positives = 290/542 (53%), Gaps = 71/542 (13%)
Query: 48 FSQKNYILA-KLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLY 106
F+ N I + KL+A YV G + +A +VFE + ST WN ++ A+ P Y
Sbjct: 36 FNNNNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKK--PGHFEYA- 92
Query: 107 KQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR-TNLMNLYLM 165
+Q+ +K +P+ +Y+ +L+ C G VH A G+ ++ ++ N +
Sbjct: 93 RQLFEKIPQPNTVSYNIMLA----CHWHHLG--VHD---ARGFFDSMPLKDVASWNTMIS 143
Query: 166 SGGECGV-GCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGA--------------W--- 207
+ + G+ G AR LF MP ++ VSW++++ GYV GD+D A W
Sbjct: 144 ALAQVGLMGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAM 203
Query: 208 --------------KIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQ 253
++F EM R +V+W MI+G +NG++ L LF M V +
Sbjct: 204 ITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNA 263
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL--VSLNNALIHMYASCGEIEEA 311
++L + L C+ + L+LGK +H V + P+ + +L+ MY+ CG++++A
Sbjct: 264 LSLTSVLLGCSNLSALQLGKQVHQLV------CKCPLSSDTTAGTSLVSMYSKCGDLKDA 317
Query: 312 YGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHG 356
+ +F ++ R++ V W +MI+G+A+ G ++AL +TF+ VL AC+H
Sbjct: 318 WELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHA 377
Query: 357 GFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGS 416
G VD G Q+F M +++GI+ + EHY CMVDL RAG + EA L+++MP KP+ A+ G+
Sbjct: 378 GLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGT 437
Query: 417 LLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKM 476
LL CRIH N LA A+ L+ E+DP A GY+ L ANVYAA RW VA++R+ M
Sbjct: 438 LLGACRIHKNLNLAEFAAKNLL-ELDPTIATGYVQL-ANVYAAQNRWDHVASIRRSMKDN 495
Query: 477 GVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGI 536
V K PG SW++IN V+H F + D + + + I++ L ++ + GY PD+ + +
Sbjct: 496 NVVKIPGYSWIEINSVVHGFRSSDRLHPELASIHEKLKDLEKKMKLAGYVPDLEFVLHDV 555
Query: 537 EE 538
E
Sbjct: 556 GE 557
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H + S L++ Y G L +A ++F + WN MI G+A+
Sbjct: 284 QVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHG 343
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
+K++ L+ +M + +PD T+ +L C GL G Q
Sbjct: 344 AGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQ 385
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 154/402 (38%), Positives = 243/402 (60%), Gaps = 24/402 (5%)
Query: 152 NVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFD 211
+VF+ N+M +S E V AR +FD MP R +VSWN+++ GY RG++ A +IFD
Sbjct: 22 DVFL-CNVMLAAYVSRSE--VAEARKVFDGMPMRDLVSWNTMIHGYAMRGEVGLAREIFD 78
Query: 212 EMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKL 271
R+ SW++MIS A++ +S++AL L+ EM A + D + LV+ +SAC+++G L +
Sbjct: 79 GTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAV 138
Query: 272 GKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMIT 331
G +H +VE N R + + L ALI MYA CG+IE A VF +M ++ +W+SMI
Sbjct: 139 GAEVHRFVESN----RIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMII 194
Query: 332 GFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIK 376
G A G E+L +TF+GVL AC+H G V EG+++F MN+ GI+
Sbjct: 195 GLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIE 254
Query: 377 PRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQK 436
P +EHYGCMVDL R+G ++EA L+++M +P+ + +LL CRIH N E+A + K
Sbjct: 255 PTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAK 314
Query: 437 LVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDF 496
L +DP G+ L++N+YA A W+ VA +R+ + + +++ PG+S ++ + +H+F
Sbjct: 315 LRV-LDP-LGDGHYVLLSNIYAQANSWEGVAEMRKTIRRDNIQRIPGRSSIEWDEKIHEF 372
Query: 497 VAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
V+GD + ++ IY+ L E+ + Q GYKP + I+E
Sbjct: 373 VSGDRLHPRSKEIYRVLEEMMDRLKQAGYKPMTGLVLQDIDE 414
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 130/302 (43%), Gaps = 42/302 (13%)
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
Y G + A ++F+ TE+ W+ MI +A+S ++++ L+++M PD T
Sbjct: 64 YAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITL 123
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFD 180
++S C+ G G +VH V ++ ++ + T L+++Y +CG + A+ +FD
Sbjct: 124 VSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMY----AKCGDIESAQRVFD 179
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSL 240
MP + V +W+S MI G A +G ++LSL
Sbjct: 180 RMPEKDVQTWSS-------------------------------MIIGLANHGLGHESLSL 208
Query: 241 FNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIH 300
F++M + + V V L AC +G + GK + N G EP V ++
Sbjct: 209 FSKMISEGMKPNGVTFVGVLIACTHVGLVSEGK--KYFRSMNEVHGIEPT-VEHYGCMVD 265
Query: 301 MYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITG--FAKQGYAQEALLTFLGVLSACSHGG 357
+ G +EEA + R M +T+ W +++ K E + L VL G
Sbjct: 266 LLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKLRVLDPLGDGH 325
Query: 358 FV 359
+V
Sbjct: 326 YV 327
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
L+ Y G + +A +VF++ W+ MI G A +S+ L+ +MI + +P+
Sbjct: 161 LIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPN 220
Query: 118 EYTYSFLLSVCARCGLFREGE-------QVHG 142
T+ +L C GL EG+ +VHG
Sbjct: 221 GVTFVGVLIACTHVGLVSEGKKYFRSMNEVHG 252
>gi|15225365|ref|NP_182015.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546766|sp|Q1PEU4.2|PP201_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g44880
gi|2344896|gb|AAC31836.1| hypothetical protein [Arabidopsis thaliana]
gi|330255385|gb|AEC10479.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 555
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 174/553 (31%), Positives = 285/553 (51%), Gaps = 92/553 (16%)
Query: 54 ILAKLLAFYVTSGYLINAHKVFE-KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDK 112
I K L ++ + A K+F+ + + + + N MI+ + + S LY+ + K
Sbjct: 12 IFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDL-RK 70
Query: 113 ET--EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGEC 170
ET PD +T++ L C+ +G Q+H ++ G+C+++++ T ++++Y G
Sbjct: 71 ETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGK-- 128
Query: 171 GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP---------------- 214
+GCAR FD+MP RS VSW +L+ GY++ G++D A K+FD+MP
Sbjct: 129 -MGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFV 187
Query: 215 ----------------HRNVVSWTTMISG-C----------------------------- 228
H+ V++WTTMI G C
Sbjct: 188 KSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGG 247
Query: 229 -AQNGKSRQALSLFNEMR-RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVG 286
QN + ++ + LF EM+ + D V +++ L A ++ G L LG+W H +V+
Sbjct: 248 YCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRK---- 303
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--- 343
+ V + A++ MY+ CGEIE+A +F +M + SW +MI G+A G A+ AL
Sbjct: 304 KLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLF 363
Query: 344 -----------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRA 392
+T L V++AC+HGG V+EGR++F M + G+ +IEHYGCMVDL RA
Sbjct: 364 VTMMIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMRE-MGLNAKIEHYGCMVDLLGRA 422
Query: 393 GLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLAL 452
G + EA L+ NMP +PN +L S L C + + E A ++ +K V E++P+ Y+ L
Sbjct: 423 GSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAV-ELEPQNDGNYV-L 480
Query: 453 VANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKT 512
+ N+YAA KRW D V+ M K +K G S ++IN ++ +F++GD+T+ I+
Sbjct: 481 LRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLV 540
Query: 513 LGEITMQAMQEGY 525
LG++ M +E Y
Sbjct: 541 LGDLLMHMNEEKY 553
>gi|45935146|gb|AAS79604.1| putative pentatricopeptide repeat-containing protein [Ipomoea
trifida]
gi|118562903|dbj|BAF37793.1| hypothetical protein [Ipomoea trifida]
Length = 575
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 173/539 (32%), Positives = 289/539 (53%), Gaps = 69/539 (12%)
Query: 27 LQIRNTTKTLFQIHSQIIINGFSQKNY--ILAKLLAFYV--TSGYLINAHKVFEKTENPS 82
++I + T+ + Q+H++I+ +G N+ KL F SG L A + P+
Sbjct: 1 MEITSMTQAM-QLHARILKSGAYDSNHGQDFHKLFTFSALSPSGDLNYARHILRTLHTPN 59
Query: 83 TAIWNQMIRGHARSETPEK--SVYLYKQMIDKET----EPDEYTYSFLLSVCARCGLFRE 136
+ +N MIR ++ S P + +++LY Q D + PD +TY F+L C++ G R
Sbjct: 60 SFYYNTMIRAYSDSTDPTRAFTLFLYMQNPDDASVAVPRPDHFTYPFVLKACSKSGHARF 119
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKG 196
G+Q+HG V SG S+ +I L++LY +SG
Sbjct: 120 GKQIHGLVFKSGVGSDRYINNALIHLYSVSG----------------------------- 150
Query: 197 YVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVAL 256
+ + A+K+FD+MP R+VVSWT++I G N + +A+ LF M + ++V +
Sbjct: 151 -----EPNLAYKVFDKMPDRDVVSWTSIIDGFVDNDRPIEAIRLFTHMIENGIEPNEVTV 205
Query: 257 VAALSACAEIGDLKLGKWIHSYVEE-NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
+ L ACA+ G L G+ IHS+V+E NFS +++ ALI MYA CG I+ A VF
Sbjct: 206 ASVLRACADTGALNTGERIHSFVKEKNFSSN-----ANVSTALIDMYAKCGCIDGALEVF 260
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEALLTF---------------LGVLSACSHGGFVD 360
+ ++ WT++I G A G +A+ F VLSA + G V
Sbjct: 261 DETLEKDVYVWTAIIAGLASHGLCMKAIEFFENMKKSDVKMDERAITAVLSAYRNAGLVS 320
Query: 361 EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
EG FF + ++ IKP I+HYGC+VD+ +RAG + +A ++ MP++P+ + +L+ G
Sbjct: 321 EGLLFFRRLKKH-KIKPTIQHYGCVVDMLTRAGRLKDAEEFIRKMPIEPDAVLWRTLIWG 379
Query: 421 CRIHNNAELASQVAQKL-VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVR 479
C+I + E + ++ ++L + +D Y+ L+ NVYAA +W++ A R+ M + G+
Sbjct: 380 CKILGDVERSERLVRELELLNMDSRDTGSYV-LLENVYAATGKWEEKAKTRELMYQRGLM 438
Query: 480 KPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
KPP S ++I+GV+H+F AGDS + +A+ +Y+ L ++ + EGY P +SE+ L I++
Sbjct: 439 KPPACSRIEIDGVVHEFTAGDSRHDEATAVYEKLEDVEERLRGEGYNPIVSEVLLEIDD 497
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/489 (32%), Positives = 262/489 (53%), Gaps = 55/489 (11%)
Query: 65 SGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFL 124
S YL + KVFE WN +I G+A++ E ++ + ++M + + PD +T S +
Sbjct: 183 SYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSV 242
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPA 184
L + A +G+++HG + +GY ++VFI ++L+++Y C R
Sbjct: 243 LPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMY--------AKCTR-------- 286
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
+D + ++F +P + +SW ++I+GC QNG + L F +M
Sbjct: 287 ------------------VDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQM 328
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYAS 304
A++ + V+ + + ACA + L LGK +H Y+ + G V + +AL+ MYA
Sbjct: 329 LIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGN----VFIASALVDMYAK 384
Query: 305 CGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGV 349
CG I A +F KM+ + VSWT+MI G+A G+A +A+ + F+ V
Sbjct: 385 CGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAV 444
Query: 350 LSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKP 409
L+ACSH G VDE ++F M Q++ I P +EHY + DL R G ++EA+ + +M ++P
Sbjct: 445 LTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEP 504
Query: 410 NDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAV 469
+V +LL CR+H N ELA +V++KL +DP+ Y+ L++N+Y+AA RW+D +
Sbjct: 505 TGSVWSTLLAACRVHKNIELAEKVSKKLFT-VDPQNIGAYV-LLSNIYSAAGRWKDARKL 562
Query: 470 RQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDI 529
R M G++K P SW++I +H FVAGD ++ I + L + Q +EGY D
Sbjct: 563 RIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDT 622
Query: 530 SELFLGIEE 538
+E+ +EE
Sbjct: 623 TEVLHDVEE 631
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 197/443 (44%), Gaps = 39/443 (8%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI-WNQMIRGHARS 96
Q+H+QI+ + +L+ +L+ Y L ++ +F +P T + W +IR +
Sbjct: 26 QLHAQILRTSLPSPS-LLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSH 84
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
S+ + QM+ PD + +L C R GE VHG ++ G +++
Sbjct: 85 GLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTC 144
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
LMN+Y V + +FD+ V S Y + K+F+ MP R
Sbjct: 145 NALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYY-----LGSLRKVFEMMPKR 199
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
++VSW T+ISG AQNG AL + EM A + D L + L AE +L GK IH
Sbjct: 200 DIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIH 259
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
Y N G + V + ++LI MYA C ++++ VF + + + +SW S+I G +
Sbjct: 260 GYAIRN---GYDAD-VFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQN 315
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G E L ++F ++ AC+H + G+Q + I+ R +
Sbjct: 316 GMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQL-----HGYIIRSRFDG 370
Query: 382 ----YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAV-LGSLLLGCRIHNNAELASQVAQK 436
+VD++++ G + A + M + D V ++++G +H +A A + ++
Sbjct: 371 NVFIASALVDMYAKCGNIRTARWIFDKMELY--DMVSWTAMIMGYALHGHAYDAISLFKR 428
Query: 437 LVAE-IDPEQAAGYLALVANVYA 458
+ E + P A L A +A
Sbjct: 429 MEVEGVKPNYVAFMAVLTACSHA 451
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 112/231 (48%), Gaps = 12/231 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH I NG+ +I + L+ Y + ++ +VF WN +I G ++
Sbjct: 257 EIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNG 316
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++ + ++QM+ + +P+ ++S ++ CA G+Q+HG ++ S + NVFI +
Sbjct: 317 MFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIAS 376
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP-- 214
L+++Y +CG + AR +FD M +VSW +++ GY G A +F M
Sbjct: 377 ALVDMY----AKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVE 432
Query: 215 --HRNVVSWTTMISGCAQNGKSRQALSLFNEMR---RARVGLDQVALVAAL 260
N V++ +++ C+ G +A FN M R GL+ A VA L
Sbjct: 433 GVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADL 483
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 162/543 (29%), Positives = 278/543 (51%), Gaps = 58/543 (10%)
Query: 11 PATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLIN 70
P + A R SL+ N ++ QIH + G +++ L+ Y SG +
Sbjct: 1003 PDHFTLASVLRACSSLIDGLNISR---QIHVHALKTGNIADSFVATTLIDVYSKSGKMEE 1059
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
A +F+ ++ A WN M+ G+ +K++ L+ + + D+ T + C
Sbjct: 1060 AEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGC 1119
Query: 131 CGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSW 190
L +G+Q+H + +G+ S++ + + ++++Y
Sbjct: 1120 LVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMY--------------------------- 1152
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG 250
+K GD+ A +F+ + + V+WT+MISGC NG QAL +++ MR++RV
Sbjct: 1153 -------IKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVM 1205
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEE 310
D+ + A + + L+ G+ +H+ V + +P + +L+ MYA CG IE+
Sbjct: 1206 PDEYTFATLIKASSCVTALEQGRQLHANVIK-LDCVSDPFV---GTSLVDMYAKCGNIED 1261
Query: 311 AYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSH 355
AY +F+KM RN W +M+ G A+ G A+EA+ ++F+G+LSACSH
Sbjct: 1262 AYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSH 1321
Query: 356 GGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLG 415
G E ++ M ++GI+P IEHY C+VD RAGL+ EA +++ MP K + ++
Sbjct: 1322 AGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINR 1381
Query: 416 SLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIK 475
+LL CRI + E +VA +L A ++P +A Y+ L++N+YAAA RW DV R+ M +
Sbjct: 1382 ALLGACRIQGDVETGKRVAARLFA-LEPFDSAAYV-LLSNIYAAANRWDDVTDARKMMKR 1439
Query: 476 MGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLG 535
V+K PG SW+ + +LH FV D ++ QA +IY + E+ ++GY PD + L
Sbjct: 1440 KNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLD 1499
Query: 536 IEE 538
+E+
Sbjct: 1500 VED 1502
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 185/435 (42%), Gaps = 82/435 (18%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS--- 96
H++I+++G + +++ LL Y G L +A +VF+ T WN ++ +A S
Sbjct: 644 HARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDS 703
Query: 97 --ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVF 154
++ ++L++ + T + +L +C G E VHG + G +VF
Sbjct: 704 NDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVF 763
Query: 155 IRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
+ L+N+Y +CG + ARLLFD M R VV WN +LKGYV+ G A+++F E
Sbjct: 764 VSGALVNIY----SKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEF 819
Query: 214 PHR----------------------------------------------NVVSWTTMISG 227
HR +V W +S
Sbjct: 820 -HRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDNPDVFCWNKKLSE 878
Query: 228 CAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGR 287
C G + A+ F M + D V L+ L+A A DL+LGK +H ++ G
Sbjct: 879 CLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKS---GL 935
Query: 288 EPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---- 343
+ VS+ N+L++MY+ G A VF M+ + +SW SMI+ A+ +E++
Sbjct: 936 DSD-VSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFI 994
Query: 344 -----------LTFLGVLSACSHGGFVDE---GRQFFECMNQNWGIKPRIEHYGCMVDLF 389
T VL ACS +D RQ + I ++D++
Sbjct: 995 DLLHEGLKPDHFTLASVLRACS--SLIDGLNISRQIHVHALKTGNIADSFV-ATTLIDVY 1051
Query: 390 SRAGLMDEAFSLVQN 404
S++G M+EA L QN
Sbjct: 1052 SKSGKMEEAEFLFQN 1066
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 194/434 (44%), Gaps = 71/434 (16%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H + +G + L+ Y G A +VF ++ WN MI A+S
Sbjct: 925 QVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSS 984
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARC--GLFREGEQVHGRVLASGYCSNVFI 155
E+SV L+ ++ + +PD +T + +L C+ GL Q+H L +G ++ F+
Sbjct: 985 LEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGL-NISRQIHVHALKTGNIADSFV 1043
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
T L+++Y SG + A LF + + WN+++ GY+ D
Sbjct: 1044 ATTLIDVYSKSG---KMEEAEFLFQNKDDLDLACWNAMMFGYIIGND------------- 1087
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
++AL LF+ + ++ DQ+ L A AC + L GK I
Sbjct: 1088 ------------------GKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQI 1129
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
H++ G + L +N+ ++ MY CG++ A VF + + V+WTSMI+G
Sbjct: 1130 HAHA---IKAGFDSDL-HVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVD 1185
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQF------FECMNQNWG 374
G +AL TF ++ A S +++GRQ +C++
Sbjct: 1186 NGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSD--- 1242
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVA 434
P + +VD++++ G +++A+ L + M ++ N A+ ++L+G H NAE A +
Sbjct: 1243 --PFVG--TSLVDMYAKCGNIEDAYRLFKKMNVR-NIALWNAMLVGLAQHGNAEEAVNLF 1297
Query: 435 QKLVAE-IDPEQAA 447
+ + + I+P++ +
Sbjct: 1298 KSMKSHGIEPDRVS 1311
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 182/432 (42%), Gaps = 62/432 (14%)
Query: 22 QIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENP 81
Q+FS F + Q+I+NG S+ N+ K LA V + A K+ +NP
Sbjct: 814 QLFSEFHRSGLRPDEFSV--QLILNGVSEVNWDEGKWLADQVQA----YAAKLSLSDDNP 867
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVH 141
WN+ + + ++ + M + D T +L+ A G+QVH
Sbjct: 868 DVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVH 927
Query: 142 GRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRG 201
G + SG S+V + +L+N+Y +GCA Y R
Sbjct: 928 GIAVKSGLDSDVSVANSLVNMY------SKMGCA---------------------YFAR- 959
Query: 202 DIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALS 261
++F++M H +++SW +MIS CAQ+ ++++LF ++ + D L + L
Sbjct: 960 ------EVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLR 1013
Query: 262 ACAEIGD-LKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
AC+ + D L + + IH + + ++ V + LI +Y+ G++EEA +F+
Sbjct: 1014 ACSSLIDGLNISRQIHVHALKTGNIADSFVATT----LIDVYSKSGKMEEAEFLFQNKDD 1069
Query: 321 RNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQF 365
+ W +M+ G+ ++AL +T AC +D+G+Q
Sbjct: 1070 LDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQ- 1128
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHN 425
G + ++D++ + G M A +V N P+D S++ GC +
Sbjct: 1129 IHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNA-GIVFNYISAPDDVAWTSMISGCVDNG 1187
Query: 426 NAELASQVAQKL 437
N + A ++ ++
Sbjct: 1188 NEDQALRIYHRM 1199
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 31/174 (17%)
Query: 268 DLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
+L LGK H+ + + S G L+N L+ MY+ CG + A VF R+ V+W
Sbjct: 636 NLLLGKCTHARIVVSGSAGDH----FLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWN 691
Query: 328 SMITGFA-----KQGYAQEAL---------------LTFLGVLSACSHGG--FVDEGRQF 365
+++ +A G AQE L +T VL C + G + EG
Sbjct: 692 AILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHG 751
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLL 419
+ G++ + G +V+++S+ G M +A L M+ D VL +++L
Sbjct: 752 YAI---KIGLEWDVFVSGALVNIYSKCGRMRDARLLFD--WMRERDVVLWNMML 800
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 170/509 (33%), Positives = 257/509 (50%), Gaps = 55/509 (10%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
IH GF + +L Y G + +A VF+ + + WN MI G+A++
Sbjct: 265 IHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGE 324
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
E++ + +M+D+ EP + L CA G G VH
Sbjct: 325 SEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVH----------------- 367
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
RLL + V NSL+ Y K +D A +F + H+ V
Sbjct: 368 -----------------RLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTV 410
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
V+W MI G AQNG +AL+LF EM+ + D LV+ ++A A++ + KWIH
Sbjct: 411 VTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGL 470
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
++ + V V ALI +A CG I+ A +F MQ R+ ++W +MI G+ G+
Sbjct: 471 AIR--TLMDKNVFVC--TALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGH 526
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
+EAL +TFL V++ACSH G V+EG +FE M +N+G++P ++HYG
Sbjct: 527 GREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYG 586
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
MVDL RAG +D+A+ +Q+MP+KP VLG++L CRIH N EL + A +L ++DP
Sbjct: 587 AMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELF-DLDP 645
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
+ GY L+AN+YA+A W VA VR M K G++K PG S V++ +H F +G + +
Sbjct: 646 DD-GGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNH 704
Query: 504 KQASLIYKTLGEITMQAMQEGYKPDISEL 532
Q+ IY L + + GY PD + +
Sbjct: 705 PQSKRIYAYLETLGDEMKAAGYVPDTNSI 733
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 204/416 (49%), Gaps = 60/416 (14%)
Query: 26 LLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI 85
LL++ + K L QI II NGF ++ KL++ + + A +VFE E+ +
Sbjct: 50 LLELCTSLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVL 109
Query: 86 WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVL 145
++ M++G+A++ T +V Y++M E P Y +++LL + R G ++HG V+
Sbjct: 110 YHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVI 169
Query: 146 ASGYCSNVFIRTNLMNLYLMSGGEC-GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDID 204
+G+ SN+F T ++NLY +C + A +F+ MP R +VSWN+++ GY
Sbjct: 170 TNGFQSNLFAMTAVVNLY----AKCRQIEDAYKMFERMPQRDLVSWNTVVAGY------- 218
Query: 205 GAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACA 264
AQNG +R+A+ + +M+ A D + LV+ L A A
Sbjct: 219 ------------------------AQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVA 254
Query: 265 EIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTV 324
++ L++G+ IH Y F G E +V++ A++ Y CG + A VF+ M RN V
Sbjct: 255 DLKALRIGRSIHGYA---FRAGFE-YMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVV 310
Query: 325 SWTSMITGFAKQGYAQEALLTFL---------------GVLSACSHGGFVDEGRQFFECM 369
SW +MI G+A+ G ++EA TFL G L AC++ G ++ GR +
Sbjct: 311 SWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLL 370
Query: 370 NQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKP----NDAVLGSLLLGC 421
++ I + ++ ++S+ +D A S+ N+ K N +LG GC
Sbjct: 371 DEK-KIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGC 425
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 55/121 (45%)
Query: 17 ALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFE 76
+ T + + L + T+ IH I + ++ L+ + G + A K+F+
Sbjct: 445 SFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFD 504
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
+ WN MI G+ + +++ L+ +M + +P+E T+ +++ C+ GL E
Sbjct: 505 LMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEE 564
Query: 137 G 137
G
Sbjct: 565 G 565
>gi|222622042|gb|EEE56174.1| hypothetical protein OsJ_05117 [Oryza sativa Japonica Group]
Length = 545
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/505 (33%), Positives = 273/505 (54%), Gaps = 27/505 (5%)
Query: 26 LLQIRNTTKTLFQIHSQIIINGF-SQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTA 84
LL T + L +IH+Q + +G + I K+ Y G +A ++F++ +P
Sbjct: 26 LLTQCKTIRELQRIHAQALTHGLHPNQQSISCKIFRSYAEFGRPADAGRLFDEIPHPDII 85
Query: 85 IWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRV 144
+ ++ H + + K++ ++ I PD + LS G R G VHG +
Sbjct: 86 SFTSLMSLHLKLDHHWKAISVFSHAIASGHRPDGFAAVGALSASGGLGDQRIGSVVHGLI 145
Query: 145 LASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDI 203
G S + + L+++Y CG AR +FD M + V+W S+L GY+K +
Sbjct: 146 FRCGLDSELVVCNALVDMYC----RCGKFEPARTVFDRMLVKDEVTWGSMLYGYMKCVGV 201
Query: 204 DGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSAC 263
D A F +MP ++ VSWT +I+G Q+ + QAL LF +M + + +V LSAC
Sbjct: 202 DSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNHITIVGVLSAC 261
Query: 264 AEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNT 323
A+IG L LG+ IH Y ++ + + + NAL+ MYA G I A+ VF ++Q ++
Sbjct: 262 ADIGALDLGRAIHGYGSKSNATTN----IIVTNALMDMYAKSGSIASAFSVFEEVQMKDA 317
Query: 324 VSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFEC 368
+WT+MI+ F QG ++A+ +TF+ VLSACSH G + EGR+ F+
Sbjct: 318 FTWTTMISSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGLIQEGRELFDK 377
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAE 428
M + + I PR+EHYGCMVDL R GL++EA +L+ +M ++P+ + SLL C H N
Sbjct: 378 MREVYHIDPRLEHYGCMVDLLGRGGLLEEAEALIDHMDVEPDIVIWRSLLSACLAHGNDR 437
Query: 429 LASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
LA ++A + + +P Y+ L+ N+YA + RW++ +R++M+ + K PG SW++
Sbjct: 438 LA-EIAGMEIIKREPGDDGVYV-LLWNMYALSNRWKEALDMRKQMLSRKIYKKPGCSWIE 495
Query: 489 INGVLHDFVAGDSTYKQASLIYKTL 513
++GV+H+F+ D T+ IY TL
Sbjct: 496 VDGVVHEFLVEDKTHDARREIYVTL 520
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 165/517 (31%), Positives = 266/517 (51%), Gaps = 57/517 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH+Q+I GF Y+ + L+ Y G L AH + W +I G+A+
Sbjct: 436 QIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHN 495
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ +K+M+++ + D +S +S CA +G Q+H + SGY ++ I
Sbjct: 496 LFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIG- 554
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
N+L+ Y + G I A+ F+++ ++
Sbjct: 555 ---------------------------------NALVSLYARCGRIKEAYLEFEKIDAKD 581
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+SW +ISG AQ+G AL +F +M RA++ +A+SA A I ++K GK IH+
Sbjct: 582 SISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHA 641
Query: 278 YV-EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+ + F + ++NALI YA CG IE+A F +M +N VSW +MITG+++
Sbjct: 642 MIIKRGFDSD-----IEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQH 696
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
GY EA+ +TF+GVLSACSH G V +G +FE M++ G+ P+ H
Sbjct: 697 GYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAH 756
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
Y C+VDL SRAG + A ++ MP++P+ + +LL C +H N E+ AQ L+ E+
Sbjct: 757 YACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLL-EL 815
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+PE +A Y+ L++N+YA + +W RQ M GV+K PG+SW+++ +H F GD
Sbjct: 816 EPEDSATYV-LLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDR 874
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ A IY+ L E+ +A + GY D L +E+
Sbjct: 875 LHPLADKIYEFLAELNKKAAEIGYFQDRYSLLNDVEQ 911
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 192/420 (45%), Gaps = 65/420 (15%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+HS +I G S + LL YV + AH++F + + +WN M+ + +
Sbjct: 335 QLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLD 394
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+S +++QM K P+++TY +L C G GEQ+H +V+ +G+ NV++ +
Sbjct: 395 NLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCS 454
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y G + A ++ + VVSW +L+ GY + A K F EM +R
Sbjct: 455 VLIDMYAKHG---KLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRG 511
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH- 276
+ S D + +A+SACA I L G+ IH
Sbjct: 512 IQS-------------------------------DNIGFSSAISACAGIQALNQGRQIHA 540
Query: 277 -SYV---EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
SYV E+ S+G NAL+ +YA CG I+EAY F K+ ++++SW +I+G
Sbjct: 541 QSYVSGYSEDLSIG---------NALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISG 591
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
FA+ GY ++AL TF +SA ++ + +G+Q M G
Sbjct: 592 FAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQ-IHAMIIKRGFDS 650
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
IE ++ +++ G +++A MP K ND +++ G H A + +K+
Sbjct: 651 DIEVSNALITFYAKCGSIEDARREFCEMPEK-NDVSWNAMITGYSQHGYGNEAVNLFEKM 709
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 169/383 (44%), Gaps = 54/383 (14%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH++II +G I L+ Y +G +I+A KVF+ + W MI G +++
Sbjct: 133 QIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNG 192
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E++++L+ +M P Y +S +LS C + LF GEQ+H V G ++
Sbjct: 193 YEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCN 252
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+ LY A +F M ++ VS+NSL+ G ++G DGA ++F +M
Sbjct: 253 ALVTLYSRMPNFVS---AEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKM---- 305
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+R + D V + + LSACA G L G+ +HS
Sbjct: 306 ---------------------------KRDYLKPDCVTVASLLSACASNGALCKGEQLHS 338
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
YV G ++ + AL+ +Y +C +I+ A+ +F Q N V W M+ F K
Sbjct: 339 YV---IKAGISSDMI-VEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLD 394
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
E+ T+ +L C+ G +D G Q + + G + +
Sbjct: 395 NLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKT-GFQFNVYVC 453
Query: 383 GCMVDLFSRAGLMDEAFSLVQNM 405
++D++++ G +D A +++ +
Sbjct: 454 SVLIDMYAKHGKLDTAHVILRTL 476
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 125/510 (24%), Positives = 221/510 (43%), Gaps = 71/510 (13%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H +I+ GF ++ + KL+ Y G L KVFE N S W+++I G +
Sbjct: 31 KLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKK 90
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA--RCGLFREGEQVHGRVLASGYCSNVFI 155
+ + L+ MI++ P E +++ +L C+ R G+ R EQ+H R++ G + I
Sbjct: 91 MSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGI-RYAEQIHARIICHGLLCSPII 149
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
L+ LY +G + AR +FD++ + VSW +++ G+
Sbjct: 150 SNPLIGLYAKNG---LIISARKVFDNLCTKDSVSWVAMISGF------------------ 188
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
+QNG +A+ LF EM A + + LS C +I +G+ +
Sbjct: 189 -------------SQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQL 235
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
H+ V F G + + NAL+ +Y+ A VF KMQ ++ VS+ S+I+G A+
Sbjct: 236 HALV---FKYG-SSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQ 291
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
QG++ AL +T +LSAC+ G + +G Q + + GI +
Sbjct: 292 QGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKA-GISSDMI 350
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGC--RIHNNAELASQVAQKLV 438
G ++DL+ + A + + + + VL +++L ++ N +E Q +
Sbjct: 351 VEGALLDLYVNCSDIKTAHEMF--LTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQI 408
Query: 439 AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVA 498
+ P Q Y +++ + A + I V K Q V + VL D A
Sbjct: 409 KGLIPNQFT-YPSILRTCTSVG------ALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYA 461
Query: 499 GDSTYKQASLIYKTLGE---ITMQAMQEGY 525
A +I +TL E ++ A+ GY
Sbjct: 462 KHGKLDTAHVILRTLTEDDVVSWTALISGY 491
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 143/320 (44%), Gaps = 62/320 (19%)
Query: 120 TYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLF 179
TY +LL +C G E +++HG++L G+ G V C
Sbjct: 12 TYIWLLDLCLNSGSLVECKKLHGKILKLGF------------------GNESVLC----- 48
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
N L+ Y GD+DG K+F++MP+R+V SW +ISG + S + L
Sbjct: 49 -----------NKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLD 97
Query: 240 LFNEMRRARVGLDQVALVAALSACA--EIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
LF+ M V +++ + L AC+ IG ++ + IH+ + + + P+ ++N
Sbjct: 98 LFSCMIEENVSPTEISFASVLRACSGHRIG-IRYAEQIHARIICH-GLLCSPI---ISNP 152
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------------- 343
LI +YA G I A VF + +++VSW +MI+GF++ GY +EA+
Sbjct: 153 LIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPT 212
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGC--MVDLFSRAGLMDEAFS 400
F VLS C+ D G Q + + +E Y C +V L+SR A
Sbjct: 213 PYVFSSVLSGCTKIKLFDVGEQLHALV---FKYGSSLETYVCNALVTLYSRMPNFVSAEK 269
Query: 401 LVQNMPMKPNDAVLGSLLLG 420
+ M K ++ SL+ G
Sbjct: 270 VFSKMQSK-DEVSFNSLISG 288
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/445 (35%), Positives = 255/445 (57%), Gaps = 54/445 (12%)
Query: 140 VHGRVLASGYCS-NVFIRTNLMNLYLMSG------------------------------G 168
+H R L SG+ + ++F+RT L+ Y +G G
Sbjct: 61 LHARALKSGFAAADLFVRTALVEAYAKAGRADLARAAFDEAPRRDVFLCNVMLAAYVTRG 120
Query: 169 ECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGC 228
E V AR +FD M R +VSWN+++ GY G++D A ++F+ M R+ SW++M+S
Sbjct: 121 E--VAEARRVFDGMRERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAY 178
Query: 229 AQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGRE 288
+ +S+ AL L+ EMR A V D +V+ LSAC+++G L +G +H +VE N G E
Sbjct: 179 TKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESN---GVE 235
Query: 289 PVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----- 343
+ V L ALI MYA CG+IE + VF M ++ ++W+SMI G A G+ +AL
Sbjct: 236 -LDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSR 294
Query: 344 ----------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAG 393
+TF+GVL +C+H G V +G+++F M+ G+ P+++HYGCMVDL R+G
Sbjct: 295 MLSEGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSG 354
Query: 394 LMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALV 453
++EA L+++MP +P+ + +LL CRI+ N E+A + KL +DP A G+ L+
Sbjct: 355 HIEEAKQLIRDMPFEPDAVIWRALLGACRIYKNVEVAEEAMAKLRV-LDP-HADGHYVLL 412
Query: 454 ANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTL 513
+N+YA A W+ VA +R+ + + +++ PG+S ++ +H+F++GD ++ ++ IYK L
Sbjct: 413 SNIYAQANSWEGVAEMRRTLRRERIQRIPGRSSIEWQNTIHEFISGDRSHPRSKEIYKML 472
Query: 514 GEITMQAMQEGYKPDISELFLGIEE 538
GE+ + Q GYKP + I+E
Sbjct: 473 GEMMDRLRQAGYKPMTGLVLQDIDE 497
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 132/338 (39%), Gaps = 75/338 (22%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHA----------------------- 94
+LA YVT G + A +VF+ WN MI G+A
Sbjct: 112 MLAAYVTRGEVAEARRVFDGMRERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSW 171
Query: 95 --------RSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLA 146
+ + ++ L+++M PD T +LS C+ G G +VH V +
Sbjct: 172 SSMMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVES 231
Query: 147 SGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDG 205
+G +V + T L+++Y +CG + + +F MP + V++W+S
Sbjct: 232 NGVELDVKLGTALIDMY----AKCGDIENSVRVFHSMPVKDVLTWSS------------- 274
Query: 206 AWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAE 265
MI G A +G ALSLF+ M + ++V + L +C
Sbjct: 275 ------------------MIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCTH 316
Query: 266 IGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTV 324
+G + GK S + V + V ++ + G IEEA + R M + V
Sbjct: 317 LGLVSDGKKYFSSMSVVHGVTPK---VQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAV 373
Query: 325 SWTSMITG---FAKQGYAQEALLTFLGVLSACSHGGFV 359
W +++ + A+EA+ L VL + G +V
Sbjct: 374 IWRALLGACRIYKNVEVAEEAMAK-LRVLDPHADGHYV 410
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 5/159 (3%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H + NG + L+ Y G + N+ +VF W+ MI G A
Sbjct: 224 EVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHG 283
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRV-LASGYCSNVFIR 156
++ L+ +M+ + +P+E T+ +L C GL +G++ + + G V
Sbjct: 284 FGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHY 343
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPAR-SVVSWNSLL 194
+++L SG + A+ L DMP V W +LL
Sbjct: 344 GCMVDLLGRSG---HIEEAKQLIRDMPFEPDAVIWRALL 379
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 162/501 (32%), Positives = 269/501 (53%), Gaps = 53/501 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H I+ +GF ++ + L+ Y G L NA ++ E E WN MI G R
Sbjct: 261 QVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQG 320
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E+++ L++ M + + DE+TY +L+ + R VH ++ +G F
Sbjct: 321 LGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTG-----FEAY 375
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+N N+L+ Y KRG D A+ +F++M ++
Sbjct: 376 KLVN-----------------------------NALVDMYAKRGYFDYAFDVFEKMTDKD 406
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
V+SWT++++GC NG +AL LF EMR + DQ+ + A LSACAE+ L+ GK +H+
Sbjct: 407 VISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHA 466
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
NF +S++N+L+ MYA CG IE+A VF M+ ++ ++WT++I G+A+ G
Sbjct: 467 ----NFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNG 522
Query: 338 YAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDE 397
++ H G V+ GR +F+ M + +GIKP EHY CM+DL R+G + E
Sbjct: 523 RGRD-------------HAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLME 569
Query: 398 AFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVY 457
A L+ M ++P+ V +LL CR+H N EL + A L E++P+ A Y+ L++N+Y
Sbjct: 570 AKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLF-ELEPKNAVPYV-LLSNLY 627
Query: 458 AAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEIT 517
+AA +W++ A R+ M GV K PG SW++++ +H F++ D ++ + + IY + EI
Sbjct: 628 SAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIM 687
Query: 518 MQAMQEGYKPDISELFLGIEE 538
+ + GY PD++ ++E
Sbjct: 688 ILIKEAGYVPDMNFALHDMDE 708
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 179/388 (46%), Gaps = 57/388 (14%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFE-KTENPSTAIWNQMIRGHARS 96
QIH+ I F +++ L+ Y ++ A +FE + + +W M+ G++++
Sbjct: 159 QIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQN 218
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
K++ ++ M + E +++T+ +L+ C G QVHG ++ SG+ +NVF+
Sbjct: 219 GDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVG 278
Query: 157 TNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
+ L+++Y +CG + AR + + M VSWNS+
Sbjct: 279 SALVDMY----SKCGDLSNARRMLETMEVDDPVSWNSM---------------------- 312
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
I GC + G +ALSLF M + +D+ + L+ + + D++ +
Sbjct: 313 ---------IVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSV 363
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
HS + G E + +NNAL+ MYA G + A+ VF KM ++ +SWTS++TG
Sbjct: 364 HSLI---VKTGFEAYKL-VNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVH 419
Query: 336 QGYAQEALLTFL---------------GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
G +EAL F VLSAC+ ++ G+Q ++ G+ +
Sbjct: 420 NGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKS-GLGSSLS 478
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
+V ++++ G +++A + +M ++
Sbjct: 479 VDNSLVSMYAKCGCIEDANKVFDSMEIQ 506
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 182/412 (44%), Gaps = 71/412 (17%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
++ Y SG L A K+F +T S W+ +I G+ R +++ L+ +M + P+
Sbjct: 78 MIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPN 137
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
++T+ +L VC+ L +G+Q+H + + + SN F+ T L+++Y + +C + A
Sbjct: 138 QFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMY--AKCKCILE-AEY 194
Query: 178 LFDDMP-ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
LF+ P R+ V W +++ GY +QNG +
Sbjct: 195 LFELAPDKRNHVLWTAMVTGY-------------------------------SQNGDGHK 223
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH-SYVEENFSVGREPVLVSLN 295
A+ F +MR + +Q + L+AC I G +H V F V +
Sbjct: 224 AIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGAN-----VFVG 278
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------ 343
+AL+ MY+ CG++ A + M+ + VSW SMI G +QG +EAL
Sbjct: 279 SALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMK 338
Query: 344 ---LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY----GCMVDLFSRAGLMD 396
T+ VL+ S FV + R + +K E Y +VD++++ G D
Sbjct: 339 IDEFTYPSVLNCFS---FVMDMRNAMSV--HSLIVKTGFEAYKLVNNALVDMYAKRGYFD 393
Query: 397 EAFSLVQNMPMKPNDAV-LGSLLLGCRIHNNA--ELASQVAQKLVAEIDPEQ 445
AF + + M K D + SL+ GC +HN + E + + I P+Q
Sbjct: 394 YAFDVFEKMTDK--DVISWTSLVTGC-VHNGSYEEALRLFCEMRIMGIHPDQ 442
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 138/280 (49%), Gaps = 27/280 (9%)
Query: 161 NLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVV 219
N L + +CG V AR LFD MP R SWN+++ Y G ++ A K+F E P R+ +
Sbjct: 45 NWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCI 104
Query: 220 SWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY- 278
+W+++ISG + G +AL LF EM+ +Q + L C+ L+ GK IH++
Sbjct: 105 TWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHA 164
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFR-KMQRRNTVSWTSMITGFAKQG 337
++ F V L+ MYA C I EA +F +RN V WT+M+TG+++ G
Sbjct: 165 IKTQFDSNAFVV-----TGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNG 219
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+A+ TF +L+AC G Q C+ ++ G +
Sbjct: 220 DGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRS-GFGANVFVG 278
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAV-LGSLLLGC 421
+VD++S+ G + A +++ M + +D V S+++GC
Sbjct: 279 SALVDMYSKCGDLSNARRMLETMEV--DDPVSWNSMIVGC 316
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 143/322 (44%), Gaps = 34/322 (10%)
Query: 26 LLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI 85
++ +RN +HS I+ GF + L+ Y GY A VFEK +
Sbjct: 354 VMDMRNA----MSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVIS 409
Query: 86 WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVL 145
W ++ G + + E+++ L+ +M PD+ + +LS CA + G+QVH L
Sbjct: 410 WTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFL 469
Query: 146 ASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGD-- 202
SG S++ + +L+++Y +CG + A +FD M + V++W +L+ GY + G
Sbjct: 470 KSGLGSSLSVDNSLVSMY----AKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGR 525
Query: 203 -----IDGAWKIFDEMPHRNVVS-----WTTMISGCAQNGKSRQALSLFNEMRRARVGLD 252
++ F M + + MI ++GK +A L N+M V D
Sbjct: 526 DHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQM---AVQPD 582
Query: 253 QVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAY 312
A L+AC G+++LG+ + + E P ++ L ++Y++ G+ EEA
Sbjct: 583 ATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVL-----LSNLYSAAGKWEEAA 637
Query: 313 GVFRKMQRRNT-----VSWTSM 329
R M+ R SW M
Sbjct: 638 KTRRLMKLRGVSKEPGCSWIEM 659
>gi|357501421|ref|XP_003620999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365545|gb|ABN09779.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496014|gb|AES77217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 601
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 194/594 (32%), Positives = 294/594 (49%), Gaps = 106/594 (17%)
Query: 19 TTRQIFSLLQIRNTT--KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY--------- 67
T R+ F++LQ T KTL +IH+ I+ N ++L K ++ +
Sbjct: 8 TERKCFNILQSSKTKTFKTLLEIHAFILRNSLHNNLHLLTKFISSSTSLALSTPRRNDAV 67
Query: 68 -LINAHKVFEKTENPSTA---IWNQMIRGHARSETPEKSVYLYKQMI-DKETEPDEYTYS 122
++ ++F P + N +I H LY Q D P YT++
Sbjct: 68 SIVQHARLFFNHTPPHKCDEFLCNTIINAHFSLRQFNHGFTLYNQFSKDCFFRPSSYTFT 127
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDM 182
+L C+ R+G Q+HG VL + +C ++++ T+L+++Y+ G VG AR +FD+M
Sbjct: 128 LILKGCSVSDAKRQGFQIHGVVLKNWFCLDLYVGTSLVDMYVKFGD---VGFARKVFDEM 184
Query: 183 PARSVVSW-------------------------------NSLLKGYVKRGDIDGAWKIFD 211
RS+VSW N ++ GYVK G +D A +FD
Sbjct: 185 SVRSLVSWTAVIVGYARCGDMVEARKLFDGMVDRDVAAFNVMIDGYVKMGRMDLARDLFD 244
Query: 212 EMPHRNVVSWTT-------------------------------MISGCAQNGKSRQALSL 240
+M +NV+SWT+ MI G QNG+S AL L
Sbjct: 245 KMRVKNVISWTSMVHGYSEDGDVDEARFLFDCMPEKNVLSWNAMIRGYCQNGRSHDALKL 304
Query: 241 FNEMR-RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
F EMR V +++V +V+ L A A++ L LG W+H +V+ N G V + NAL+
Sbjct: 305 FCEMRGNVDVEMNEVTVVSVLPAVADLSALDLGGWVHGFVQRNQLDGS----VHVCNALV 360
Query: 300 HMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------L 344
MYA CGEI +A VF +M ++T SW ++I G+ G A+EAL +
Sbjct: 361 DMYAKCGEIGKAKLVFEEMTEKDTGSWNALINGYGVNGCAKEALEVFAMMLREGFEPNQI 420
Query: 345 TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQN 404
T VLSAC+H G V+EGR+ FE M + +GI P+IEHYGCM+DL RAG +DEA L+Q
Sbjct: 421 TMTSVLSACNHCGLVEEGRRCFEAM-ERFGIVPQIEHYGCMIDLLGRAGRLDEAEKLIQA 479
Query: 405 MPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQ 464
MP PN+ +L S L C + A ++ K+ +++ E A Y+ L N+YA +RW
Sbjct: 480 MPYDPNEIILTSFLFACCYFEDVSRAERIL-KVAVKMEKEGAGDYVML-RNLYATERRWA 537
Query: 465 DVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASL--IYKTLGEI 516
DV V++ M K G K S ++++G +FVAG ++ + L I TLG++
Sbjct: 538 DVEDVKEMMKKRGSNKEVAWSVIEVDGRFREFVAGYYSHSHSHLEAIQSTLGQL 591
>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 157/472 (33%), Positives = 256/472 (54%), Gaps = 61/472 (12%)
Query: 85 IWNQMIRGHARSETPEKSVYLYKQMIDKE-TEPDEYTYSFLLSVCARCGLFREGEQVHGR 143
+WN MIRG++RS+ P +++ LY MI K P+ +T+ FLL+ CAR G +VH
Sbjct: 1 MWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSH 60
Query: 144 VLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDI 203
++ G+ S++F+R L++LY + G + AR LFD+ R +VS+N+++KGY +
Sbjct: 61 IIKHGFESDLFVRNALIHLYSVFG---NLNLARTLFDESLVRDLVSYNTMIKGYAEVNQP 117
Query: 204 DGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSAC 263
+ A +F EM + + V+ ++S AC
Sbjct: 118 ESALCLFGEMQNSDEVTLVAVLS-----------------------------------AC 142
Query: 264 AEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR--R 321
A +G LGK ++ EN + +L + A++ MYA CG I+ A +FR++ + +
Sbjct: 143 ARLGAFDLGKRLYHQYIENGVFNQNTILTA---AVMDMYAKCGSIDSALEIFRRVGKNMK 199
Query: 322 NTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFF 366
+ SMI G A+ G + A+ +TF+GVL AC H G ++EG++ F
Sbjct: 200 TGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLF 259
Query: 367 ECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNN 426
E M +GIKP++EHYGCMVDL R G ++EA+ LVQ MP + N + +LL CR H N
Sbjct: 260 ESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGN 319
Query: 427 AELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSW 486
++ QKL+ E++ + A Y+ L++N+ A A +W++ VR+ M G+RKPPG S+
Sbjct: 320 VKIGEIAGQKLL-EMEAQHGARYV-LLSNILADANQWEEARQVRKVMEDHGIRKPPGWSY 377
Query: 487 VQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+++ G +H FVA D ++ Q I L ++ M+ GY P+ +++ I+E
Sbjct: 378 IELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTAQVMFDIDE 429
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 151/341 (44%), Gaps = 51/341 (14%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
M+ + I P N T L + S L+ + ++HS II +GF ++ L+
Sbjct: 25 MIAKGIAPPNNFTFPFLLNSCARLSSLEPGH------EVHSHIIKHGFESDLFVRNALIH 78
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y G L A +F+++ +N MI+G+A PE ++ L+ +M DE T
Sbjct: 79 LYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEM----QNSDEVT 134
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFD 180
+LS CAR G F G++++ + + +G VF + ++ +M
Sbjct: 135 LVAVLSACARLGAFDLGKRLYHQYIENG----VFNQNTILTAAVM--------------- 175
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH--RNVVSWTTMISGCAQNGKSRQAL 238
DM Y K G ID A +IF + + + +MI+G AQ+G A+
Sbjct: 176 DM--------------YAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAI 221
Query: 239 SLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSV-GREPVLVSLNNA 297
++F E+ + D+V V L AC G ++ GK + E F+ G +P +
Sbjct: 222 TVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKL---FESMFNAYGIKPQMEHY-GC 277
Query: 298 LIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQG 337
++ + G +EEAY + +KM N+V W ++++ G
Sbjct: 278 MVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHG 318
>gi|222616851|gb|EEE52983.1| hypothetical protein OsJ_35654 [Oryza sativa Japonica Group]
Length = 632
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 167/458 (36%), Positives = 261/458 (56%), Gaps = 29/458 (6%)
Query: 39 IHSQIIINGFSQKNYILAK-LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
IH + GF ++ ++ L+ FY L +A KVF++ W ++ G+AR+
Sbjct: 164 IHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAG 223
Query: 98 TPEKSVYLYKQMID-KETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
+++ L+ +M+ P+ T +S + GL G +H V G +V +
Sbjct: 224 LADEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLD 283
Query: 157 TNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
L++++ G+CG V AR +FD M + V SW S++ Y K GD++ A ++F +MP
Sbjct: 284 NALVDMF----GKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPR 339
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
RNVVSW+ MI+ +Q + +A+ LF EM A V LV+ LSACA++G L LG+WI
Sbjct: 340 RNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWI 399
Query: 276 HSYVEENFSVGREPVL-VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
+ EN+ V + L V+L NALI M+A CG++ EA +F +M RN VSW +MI A
Sbjct: 400 Y----ENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHA 455
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
G ++EA+ +TFLG+L++CSH G V EGR++F+ M + I+PR+
Sbjct: 456 VHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPRV 515
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
EHY CM+DL + GL++EAF + + MPM+ ++A G+LL CR+H N E+ + VA KLV
Sbjct: 516 EHYACMIDLLGKVGLLEEAFEVARGMPMEADEAGWGALLNACRMHGNVEIGACVADKLV- 574
Query: 440 EIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMG 477
E+DP + Y+ L++ +YA+ +W V +R M G
Sbjct: 575 ELDPSDSGIYV-LMSQIYASKNKWDQVKMLRMTMRDRG 611
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 214/500 (42%), Gaps = 96/500 (19%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS---GYLI 69
T+ + T + SLL+ + + L Q+H+ + + G + + LAF S
Sbjct: 28 TNRNLVVTHPLLSLLESCASFRRLLQLHALLTVTGLAGNGFPAFGFLAFCALSTPPRLAH 87
Query: 70 NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
A + + P+ + M+RG R+ P +++ L+++++ D T+ F + A
Sbjct: 88 AAAILARASPGPNAYMLGTMMRGFLRARLPARALGLFRRVVRDRLPADARTFVFAVKAAA 147
Query: 130 ------RCGLFREGEQVHGRVLASGYCS-NVFIRTNLMNLYLMSGGECGVGCARLLFDDM 182
G GE +H L G+ +V + L++ Y + A +FD+M
Sbjct: 148 AAAESEHGGTPSGGEAIHCAALKCGFVGESVLVGNALVHFY---ANHKSLDDAGKVFDEM 204
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
P R VVSW +L+ GY + G D AW++F M ++ G N
Sbjct: 205 PERDVVSWTTLVDGYARAGLADEAWRLFCRM---------VVVGGMRPNA---------- 245
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHM- 301
V LVAA+SA ++G L G +H YV E V R V+L+NAL+ M
Sbjct: 246 -----------VTLVAAVSAIGQMGLLAFGIMLHKYVTEG-GVARS---VNLDNALVDMF 290
Query: 302 ------------------------------YASCGEIEEAYGVFRKMQRRNTVSWTSMIT 331
YA CG++E A +F+ M RRN VSW+ MI
Sbjct: 291 GKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIA 350
Query: 332 GFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIK 376
+++ +EA+ T + VLSAC+ G +D GR +E + I
Sbjct: 351 AYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIG 410
Query: 377 PRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQK 436
+ ++D+F++ G + EA L M + N ++++ +H +E A ++ ++
Sbjct: 411 LTVNLGNALIDMFAKCGDVGEASKLFDEMAER-NVVSWNTMIMAHAVHGQSEEAIRLFEQ 469
Query: 437 LVAE-IDPEQAAGYLALVAN 455
L E I P+Q +L L+A+
Sbjct: 470 LKGENIVPDQIT-FLGLLAS 488
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 172/540 (31%), Positives = 281/540 (52%), Gaps = 67/540 (12%)
Query: 21 RQIFSLL-----QIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVF 75
R F LL ++RN FQ ++ I+ G ++ L++ + GY+ + ++F
Sbjct: 104 RHTFPLLLKAFSKLRNENP--FQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLF 161
Query: 76 EKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFR 135
+T W +I G R+ +++ + +M E DE T ++SV + R
Sbjct: 162 IETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVT---IVSVLCAAAMLR 218
Query: 136 E---GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNS 192
+ G VHG + SG R+++D V ++
Sbjct: 219 DVWFGRWVHGFYVESG---------------------------RVIWD------VYVGSA 245
Query: 193 LLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLD 252
L+ Y K G D A K+F+EMP RN+VSW +I+G Q + ++AL +F EM + +
Sbjct: 246 LVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPN 305
Query: 253 QVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAY 312
Q + +AL+ACA++G L G+W+H YV+ + + + L AL+ MY+ CG ++EA
Sbjct: 306 QSTVTSALTACAQLGSLDQGRWLHEYVDRS----KLGLNSKLGTALVDMYSKCGCVDEAL 361
Query: 313 GVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGG 357
VF K+ ++ WT+MI G A +G A +L +TFLGVLSAC+HGG
Sbjct: 362 LVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGG 421
Query: 358 FVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSL 417
VDEG + F M ++ ++P ++HYGCMVDL RAG ++EA +++MPM+P V G+L
Sbjct: 422 LVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGAL 481
Query: 418 LLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMG 477
GC IH EL + L+ ++ P + Y+ L+AN+Y+ ++W+ A VR+ M G
Sbjct: 482 FSGCMIHKAFELGEHIGNHLI-KLQPHHSGRYI-LLANLYSRCQKWEAAANVRRLMKGKG 539
Query: 478 VRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIE 537
V K PG SW+++NGV+H+F+A D ++ ++ +Y L ++ Q Y D + L I+
Sbjct: 540 VDKSPGCSWIEVNGVIHEFIAFDKSHTESINVYMMLESVSAQLKLATYALDSNLLTFTID 599
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 205/429 (47%), Gaps = 67/429 (15%)
Query: 32 TTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS-GYLINAHKVFEKTENPSTAIWNQMI 90
T L Q S +I +G + + L+ +L GY + +F++ P +WN +I
Sbjct: 20 TFDHLKQTTSILITSGLAHHTFFLSDILRSATKDLGYTL---LLFDRLATPYIFLWNTII 76
Query: 91 RGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE-QVHGRVLASGY 149
RG + S P+ + Y ++ + PD +T+ LL ++ L E Q + ++ G
Sbjct: 77 RGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSK--LRNENPFQFYAHIVKFGL 134
Query: 150 CSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWK 208
+ F++ +L++ + CG V C+R LF + + VVSW +L
Sbjct: 135 DFDAFVQNSLVSAF----AHCGYVDCSRRLFIETAKKDVVSWTAL--------------- 175
Query: 209 IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGD 268
I+GC +NG++ +AL F EMR + V +D+V +V+ L A A + D
Sbjct: 176 ----------------INGCLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRD 219
Query: 269 LKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTS 328
+ G+W+H + E+ GR V + +AL+ MY+ CG ++A VF +M RN VSW +
Sbjct: 220 VWFGRWVHGFYVES---GRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGA 276
Query: 329 MITGFAKQGYAQEALLTF---------------LGVLSACSHGGFVDEGRQFFECMNQN- 372
+I G+ + +EAL F L+AC+ G +D+GR E ++++
Sbjct: 277 LIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSK 336
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK---PNDAVLGSLLLGCRIHNNAEL 429
G+ ++ +VD++S+ G +DEA + + +P K P A++ L + ++ L
Sbjct: 337 LGLNSKLG--TALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNL 394
Query: 430 ASQVAQKLV 438
SQ+ + V
Sbjct: 395 FSQMIRSRV 403
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 123/273 (45%), Gaps = 44/273 (16%)
Query: 209 IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGD 268
+FD + + W T+I G + + + + L ++ +R V D+ L A +++ +
Sbjct: 60 LFDRLATPYIFLWNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRN 119
Query: 269 LKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTS 328
++ V+ F + + + N+L+ +A CG ++ + +F + +++ VSWT+
Sbjct: 120 ENPFQFYAHIVK--FGLDFDAF---VQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTA 174
Query: 329 MITGFAKQGYAQEAL---------------LTFLGVLSACS-----------HGGFVDEG 362
+I G + G A EAL +T + VL A + HG +V+ G
Sbjct: 175 LINGCLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESG 234
Query: 363 RQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCR 422
R ++ + +VD++S+ G D+A + MP + N G+L+ G
Sbjct: 235 RVIWDVYVGS-----------ALVDMYSKCGYCDDAVKVFNEMPTR-NLVSWGALIAGYV 282
Query: 423 IHNNAELASQVAQKLVAE-IDPEQAAGYLALVA 454
N + A +V Q+++ E I+P Q+ AL A
Sbjct: 283 QCNRYKEALKVFQEMIIEGIEPNQSTVTSALTA 315
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 162/515 (31%), Positives = 266/515 (51%), Gaps = 60/515 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H I NG+ K ++ L+ YV L A +F+K + W MI ++ ++
Sbjct: 306 RVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQ 365
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++++ L M P+ +T+S +L C R + +Q+H ++ G S+VF+R+
Sbjct: 366 LNDRAMRLLAFMFRDGVMPNMFTFSSVLRACER---LYDLKQLHSWIMKVGLESDVFVRS 422
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y K G++ A K+F EM +
Sbjct: 423 ALIDVY----------------------------------SKMGELLEALKVFREMMTGD 448
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
V W ++I+ AQ+ +AL L+ MRR DQ L + L AC + L+LG+ H
Sbjct: 449 SVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHV 508
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
+V ++ +L NNAL+ MY CG +E+A +F +M +++ +SW++MI G A+ G
Sbjct: 509 HV---LKFDQDLIL---NNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNG 562
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
++ EAL +T LGVL ACSH G V+EG +F MN +GI P EHY
Sbjct: 563 FSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHY 622
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
GCM+DL RA +D+ L+ M +P+ +LL CR N +LA+ A++++ ++D
Sbjct: 623 GCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEIL-KLD 681
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P+ Y+ L++N+YA +KRW DVA VR+ M K G+RK PG SW+++N +H F+ GD +
Sbjct: 682 PQDTGAYV-LLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILGDKS 740
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIE 537
+ Q I + L + + GY PD + + +E
Sbjct: 741 HPQIDEINRQLNQFICRLAGAGYVPDTNFVLQDLE 775
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 36 LFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHAR 95
L Q+HS I+ G ++ + L+ Y G L+ A KVF + + +WN +I A+
Sbjct: 402 LKQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQ 461
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
+++++LYK M D+ T + +L C L G Q H VL + ++ +
Sbjct: 462 HSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLK--FDQDLIL 519
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
L+++Y G + A+ +F+ M + V+SW
Sbjct: 520 NNALLDMYCKCG---SLEDAKFIFNRMAKKDVISW------------------------- 551
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIG 267
+TMI+G AQNG S +AL+LF M+ + + ++ L AC+ G
Sbjct: 552 ------STMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAG 597
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 185/593 (31%), Positives = 299/593 (50%), Gaps = 74/593 (12%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
ML + I+P S+ L T + + +T Q+H +++G + +L+ LL
Sbjct: 65 MLTQGIVP-----DSRVLPT--VIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLH 117
Query: 61 FYVTSGYLINAHKVFEKTENP----STAI------------------------------- 85
YV +L +A VF+K P S+A+
Sbjct: 118 MYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVS 177
Query: 86 WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVL 145
WN MI G RS + +V +++ M + +PD + S +L + G Q+H V+
Sbjct: 178 WNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVI 237
Query: 146 ASGYCSNVFIRTNLMNLYLMSGGECGVGCARLL---FDDMPARSVVSWNSLLKGYVKRGD 202
G + F+ + L+++Y G+C CA + F++M V + N+L+ G + G
Sbjct: 238 KQGLGPDKFVVSALIDMY----GKCA--CASEMSGVFNEMDEVDVGACNALVTGLSRNGL 291
Query: 203 IDGAWKIFDEMP--HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
+D A ++F + NVVSWT+MI+ C+QNGK +AL LF EM+ V + V + L
Sbjct: 292 VDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLL 351
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
AC I L GK H + N V + +ALI MYA CG + + F M
Sbjct: 352 PACGNIAALLHGKAAHCFSLRNGIFND----VYVGSALIDMYAKCGRMLASRLCFDMMPN 407
Query: 321 RNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQF 365
RN VSW S++ G+A G EA+ ++F VLSAC+ GG +EG +
Sbjct: 408 RNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFY 467
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHN 425
F+ M++N G++ R+EHY CMV L R+G ++EA+++++ MP +P+ V G+LL CR+HN
Sbjct: 468 FDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHN 527
Query: 426 NAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQS 485
+L ++A K V E++P Y+ L++N+YA+ W +V VR M G++K PG S
Sbjct: 528 RVDLG-EIAAKRVFELEPRNPGNYI-LLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYS 585
Query: 486 WVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
W++I +H +AGDS++ Q I + L ++T++ + GY P + +EE
Sbjct: 586 WIEIKNKVHMLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEE 638
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 138/301 (45%), Gaps = 25/301 (8%)
Query: 103 VYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNL 162
+ ++ M+ + PD ++ CA + G+Q+H L SG + + ++L+++
Sbjct: 59 IRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHM 118
Query: 163 YLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIF----DEMPHRNV 218
Y+ + AR +FD +P VV+ ++L+ + ++G + ++F D N+
Sbjct: 119 YVQFD---HLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNL 175
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
VSW MISG ++G A+ +F M + D ++ + L A ++ +G IH Y
Sbjct: 176 VSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCY 235
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
V + +G + +VS ALI MY C E GVF +M + + +++TG ++ G
Sbjct: 236 VIKQ-GLGPDKFVVS---ALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGL 291
Query: 339 AQEALLTF-------------LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCM 385
AL F ++++CS G E + F M Q G+KP C+
Sbjct: 292 VDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREM-QIEGVKPNSVTIPCL 350
Query: 386 V 386
+
Sbjct: 351 L 351
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 173/524 (33%), Positives = 281/524 (53%), Gaps = 50/524 (9%)
Query: 55 LAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKET 114
L K +A +V + L +A VFEK +T WN M+ G+ + K + ++ DK
Sbjct: 76 LNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAH---ELFDKIP 132
Query: 115 EPDEYTYSFLLSVC--------ARCGLFRE---GEQVHGRVLASGYCSN----------- 152
EPD +Y+ +L VC A F + + L SG+ N
Sbjct: 133 EPDSVSYNIML-VCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFS 191
Query: 153 VFIRTNLMNLYLMSGGECGVG---CARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKI 209
V N ++ M G G A L+ ++ +SVV ++L GY+K G ++ A +I
Sbjct: 192 VMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERI 251
Query: 210 FDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDL 269
F M +N+V+W +MI+G +N ++ L +F M +RV + ++L + L C+ + L
Sbjct: 252 FQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSAL 311
Query: 270 KLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSM 329
LG+ +H V ++ + ++ + +LI MY CG+++ A+ +F +M R++ +SW +M
Sbjct: 312 PLGRQMHQLVSKS-PLSKDTTACT---SLISMYCKCGDLDSAWKLFLEMPRKDVISWNAM 367
Query: 330 ITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWG 374
I+G+A+ G ++AL +TF+ V+ AC+H GFVD G Q+F+ M + +G
Sbjct: 368 ISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFG 427
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVA 434
I+ + HY C++DL RAG +DEA SL++ MP KP+ A+ G+LL CRIH N +LA A
Sbjct: 428 IEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIHKNLDLAEFAA 487
Query: 435 QKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLH 494
+ L+ +DP A GY+ L AN+YAA +W VA VR+ M + V K PG SW++I V H
Sbjct: 488 RNLL-NLDPTSATGYVQL-ANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTH 545
Query: 495 DFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+F + D + + + I+K L E+ + GY PD+ +EE
Sbjct: 546 EFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVEE 589
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 129/266 (48%), Gaps = 30/266 (11%)
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQ-NGKSRQALSLFN 242
A VVS N + +V+ D++ A +F++M R V+W TM+SG + GK ++A LF+
Sbjct: 70 ASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFD 129
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY-VEENFS-VGREPVL-VSLNNALI 299
++ D V+ ++ L ++ SY VE + + PV ++ N LI
Sbjct: 130 KIPEP----DSVSY-----------NIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLI 174
Query: 300 HMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG--YAQEALLTFLG----VLSAC 353
+A G++++A+ +F M +N VSW++MI+G+ + G A E L +G V+
Sbjct: 175 SGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETA 234
Query: 354 SHGGFVDEGR-QFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM---PMKP 409
G++ G+ + E + Q +K + + M+ + ++ + + M ++P
Sbjct: 235 MLTGYMKFGKVELAERIFQRMAVKNLVT-WNSMIAGYVENCRAEDGLKVFKTMIESRVRP 293
Query: 410 NDAVLGSLLLGCRIHNNAELASQVAQ 435
N L S+LLGC + L Q+ Q
Sbjct: 294 NPLSLSSVLLGCSNLSALPLGRQMHQ 319
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 6/138 (4%)
Query: 2 LVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAF 61
++E + NP + S L S L + Q+H + + S+ L++
Sbjct: 286 MIESRVRPNPLSLSSVLLGCSNLSALPLGR------QMHQLVSKSPLSKDTTACTSLISM 339
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
Y G L +A K+F + WN MI G+A+ K+++L+ +M + +PD T+
Sbjct: 340 YCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITF 399
Query: 122 SFLLSVCARCGLFREGEQ 139
++ C G G Q
Sbjct: 400 VAVILACNHAGFVDLGVQ 417
>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 165/482 (34%), Positives = 262/482 (54%), Gaps = 55/482 (11%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H I+ G Q ++I L+ Y+ G + +A ++FE + W MI G +++
Sbjct: 269 VHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDC 328
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
+ +V ++++M+ P T + +L+ CA G F G VHG +L R
Sbjct: 329 ADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQ--------RIK 380
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
L D+P++ NSL+ Y K G ++ + +FD M R++
Sbjct: 381 L---------------------DIPSQ-----NSLVTMYAKCGHLEQSCSVFDRMSRRDI 414
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
VSW ++SG AQNG +AL LFNEMR+AR D + +V+ L ACA IG L GKWIH++
Sbjct: 415 VSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNF 474
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
V ++ +G P ++ ++ AL+ MY+ CG++ A F +M +++ VSW+S+I G+ G
Sbjct: 475 VTKS-CLG--PCIL-IDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGK 530
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
+ AL + +L +LSACSH G VD+G FF M +++GI+PR+EH
Sbjct: 531 GETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRA 590
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
C+VDL SRAG ++EA+S + M KP+ VLG LL CR N EL VA+++V + P
Sbjct: 591 CIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVI-LKP 649
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
A Y+ L A+ YA+ KRW V V +M + ++K PG S+++++G + F S++
Sbjct: 650 ANAGNYVQL-AHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSSH 708
Query: 504 KQ 505
Q
Sbjct: 709 PQ 710
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 192/408 (47%), Gaps = 57/408 (13%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H+ +I GF + +L Y G + +A +FE + WN ++ G+A+
Sbjct: 168 LHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGN 227
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
+ + L +M EPD+ T+ L+S A G+ VHG +L +G + I T+
Sbjct: 228 IREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETS 287
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
L+ +YL K G+++ A++IF+ M H++V
Sbjct: 288 LIGMYL----------------------------------KCGNVNSAFRIFEGMMHKDV 313
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
+SWT MISG QN + A+++F M ++RV + + L+ACAE+G LG +H Y
Sbjct: 314 ISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGY 373
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ R + + N+L+ MYA CG +E++ VF +M RR+ VSW ++++G A+ G+
Sbjct: 374 ILRQ----RIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGH 429
Query: 339 AQEALLTF---------------LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
+ALL F + +L AC+ G + +G+ + ++ + P I
Sbjct: 430 LCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSC-LGPCILIDT 488
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAV-LGSLLLGCRIHNNAELA 430
+VD++S+ G + A MP + D V S++ G H E A
Sbjct: 489 ALVDMYSKCGDLGSAQKCFDRMPQQ--DLVSWSSIIAGYGSHGKGETA 534
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 125/264 (47%), Gaps = 41/264 (15%)
Query: 80 NPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
NP+T +N +I + + + Y M+ +T PD +T+ L+ C LF G
Sbjct: 10 NPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLS 69
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVK 199
H RV+ GY S+ +I T+L+N Y K
Sbjct: 70 FHQRVIVDGYSSDSYIATSLINFY----------------------------------SK 95
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
G A K+FD M RNVV WTTMI + G+ A S++N MRR + V ++
Sbjct: 96 FGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGL 155
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
LS E+ L+ +H+ V + + G + V+L N+++++Y CG +E+A +F M
Sbjct: 156 LSGVLELVHLQC---LHACVIQ-YGFGSD---VALANSMLNVYCKCGRVEDAQALFELMD 208
Query: 320 RRNTVSWTSMITGFAKQGYAQEAL 343
R+ +SW S+++G+A+ G +E L
Sbjct: 209 ARDVISWNSLVSGYAQLGNIREVL 232
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 171/387 (44%), Gaps = 63/387 (16%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
H ++I++G+S +YI L+ FY G+ +A KVF+ ++ + W MI + R+
Sbjct: 68 LSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRA 127
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFR--EGEQVHGRVLASGYCSNVF 154
+ + +Y M + +P T LLS G+ + +H V+ G+ S+V
Sbjct: 128 GEHDVAFSMYNIMRRQGIQPSSVTMLGLLS-----GVLELVHLQCLHACVIQYGFGSDVA 182
Query: 155 IRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
+ +++N+Y +CG V A+ LF+ M AR V+SWNSL+ GY + G+I
Sbjct: 183 LANSMLNVYC----KCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNI---------- 228
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK 273
R+ L L M+ + DQ + +SA A L +GK
Sbjct: 229 ---------------------REVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGK 267
Query: 274 WIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF 333
+H ++ G E + +LI MY CG + A+ +F M ++ +SWT+MI+G
Sbjct: 268 MVHGHI---LRAGLEQD-SHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGL 323
Query: 334 AKQGYAQEALLTF---------------LGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
+ A A+ F VL+AC+ G G + + IK
Sbjct: 324 VQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQ-RIKLD 382
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNM 405
I +V ++++ G ++++ S+ M
Sbjct: 383 IPSQNSLVTMYAKCGHLEQSCSVFDRM 409
>gi|147852347|emb|CAN80116.1| hypothetical protein VITISV_032528 [Vitis vinifera]
Length = 505
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 174/516 (33%), Positives = 265/516 (51%), Gaps = 71/516 (13%)
Query: 8 PANPATSSKAL--TTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS 65
P P+ + L T +Q SLL + ++ K LFQI +I LL F +S
Sbjct: 14 PPKPSNGNLNLVSTKQQCLSLLNLCSSMKHLFQIRGH---------GFIAGPLLRFCASS 64
Query: 66 --GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSF 123
G L +A + +E + WN +IR +A ++P +++ Y +M PD+ T+
Sbjct: 65 PLGNLNHARVLLSGSEKSEVSSWNDLIRSYATRDSPREAIGAYLEMRSLGISPDKLTFPI 124
Query: 124 LLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMP 183
LL CA F EG ++ V+ G NV+++ +++ Y
Sbjct: 125 LLKACAXISAFNEGRKIQVDVMKHGLDCNVYVQNTMIHFY-------------------- 164
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
G KR I A ++FDEM +R VVSW ++S C N + LF +
Sbjct: 165 ------------GSCKR--IRDARRMFDEMSYRTVVSWNAVLSACVDNEWLNDSFGLFVK 210
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
MR + D+ +V LSAC+E+G+L G+W+HS V E V V L AL+ MYA
Sbjct: 211 MRGSGFDPDETTMVILLSACSELGNLSFGRWVHSQVIEKGMV----VNCRLGTALVDMYA 266
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLG 348
CG + EA VF +M RN +W++MI G A+ G+A+EAL +TFLG
Sbjct: 267 KCGAVCEASLVFHRMLERNVWTWSAMILGLAQHGFAKEALELFPKMKQSSISPNYVTFLG 326
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
VL ACSH G VD+G +FF M GI+P + HYG MVD+ SRAG + EA++ + NMP++
Sbjct: 327 VLCACSHAGLVDDGYRFFHDMEYVHGIEPMMIHYGAMVDILSRAGRLKEAYNFILNMPVE 386
Query: 409 PNDAVLGSLLLGCRIH---NNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQD 465
+ V +LL C IH +N + +V ++L+ E++P + +G +VAN+YA +W
Sbjct: 387 ADPVVWRTLLSACTIHGINDNDGVGDKVRKRLL-ELEPRR-SGNFVMVANMYAEVGKWDK 444
Query: 466 VAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
A VR+ M G++K G+S +++ G +H F +GD
Sbjct: 445 AANVRRTMKDTGLKKMAGESCIEVGGSIHRFFSGDD 480
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 166/467 (35%), Positives = 261/467 (55%), Gaps = 29/467 (6%)
Query: 40 HSQIIINGFSQKNYILAK-LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+++++ + ++N + +L Y SG + A +FE+ W +I G+ + E
Sbjct: 237 NARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIER 296
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
+++ +Y+ M+ P+E L+S C R EG+Q HG ++ +G+ FI+
Sbjct: 297 LGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQAT 356
Query: 159 LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
+++ Y CG + A L F+ V SWN+L+ G+V+ G I+ A ++FDEMP R+
Sbjct: 357 IIHFY----AACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERD 412
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
V SW++MISG +QN + AL LF+EM V +++ +V+ SA A +G L G+W H
Sbjct: 413 VFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHE 472
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR-NTVS-WTSMITGFAK 335
Y+ N P+ +LN ALI MYA CG I A +F ++Q R ++VS W ++I G A
Sbjct: 473 YILSN----SIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAM 528
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
G+A +L +TF+GVLSAC H G VD G ++F+ M + I+P I+
Sbjct: 529 HGHANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIK 588
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HYGCM+DL RAG + EA +++ MPMK + + G+LL CR H N E+ + A+ L A+
Sbjct: 589 HYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACRTHGNVEIGERAAENL-AK 647
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWV 487
+D AG + L++N+YA A RW D VR+ M ++K PG S V
Sbjct: 648 LDISHGAGRV-LLSNIYADAGRWDDAFLVRRAMQSQRMKKSPGCSGV 693
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 149/290 (51%), Gaps = 9/290 (3%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
+LA YV SG L NA +FEK + M+ G A++ +++ ++K M P+
Sbjct: 124 MLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFKDMRFAGVIPN 183
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
E T + ++S + G +H G + + TNL+++Y + +G AR+
Sbjct: 184 EVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVCSS---LGNARV 240
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
LFD++P R+VV+WN +L GY K G +D A +F+ +P ++VVSW T+I G Q + +A
Sbjct: 241 LFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEA 300
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS-YVEENFSVGREPVLVSLNN 296
L ++ M R VG ++V +V +SAC + G+ H V F +
Sbjct: 301 LRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYD-----FIQA 355
Query: 297 ALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
+IH YA+CGEI A+ F + + SW ++I+GF + G ++A F
Sbjct: 356 TIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLF 405
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 160/317 (50%), Gaps = 39/317 (12%)
Query: 111 DKETEPDEYTYSFL--LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGG 168
+K+T+ +Y + + L C+ +G+Q+H V SG SN+F++ +L++ Y+
Sbjct: 43 NKDTQHSDYELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYV---- 98
Query: 169 ECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISG 227
+C + AR LFD VS N +L GYVK G +D A +F++MP + VS+TTM+ G
Sbjct: 99 KCRLISNARSLFDTCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMG 158
Query: 228 CAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGR 287
AQN +A+ +F +MR A V ++V L + +SA + +G + + +H+ +F +G
Sbjct: 159 LAQNNCWLEAIGVFKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHAL---SFKLGL 215
Query: 288 EPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFL 347
E + + N L+HMY C + A +F ++ RN V+W M+ G++K
Sbjct: 216 EALNIVATN-LVHMYCVCSSLGNARVLFDEIPERNVVTWNVMLNGYSKS----------- 263
Query: 348 GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM-- 405
G VD R FE + + +G ++D + + + EA + ++M
Sbjct: 264 ---------GLVDLARDLFERIPAK-----DVVSWGTIIDGYVQIERLGEALRMYRSMLR 309
Query: 406 -PMKPNDAVLGSLLLGC 421
+ PN+ ++ L+ C
Sbjct: 310 TGVGPNEVMIVDLISAC 326
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 133/334 (39%), Gaps = 71/334 (21%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS- 96
Q H I+ GF ++I A ++ FY G + A FE + WN +I G R+
Sbjct: 337 QFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNG 396
Query: 97 ----------ETPEKSVY--------------------LYKQMIDKETEPDEYTYSFLLS 126
E PE+ V+ L+ +M+ +P+E T + S
Sbjct: 397 MIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFS 456
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARS 186
A G EG H +L++ N D++ A
Sbjct: 457 AIATLGTLMEGRWAHEYILSNSIPLN---------------------------DNLNA-- 487
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHR--NVVSWTTMISGCAQNGKSRQALSLFNEM 244
+L+ Y K G I A ++F E+ R +V W +I G A +G + +L LF+++
Sbjct: 488 -----ALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQL 542
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYAS 304
+R R+ + + + LSAC G + G+ ++ +++ EP + +I +
Sbjct: 543 QRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNI--EPN-IKHYGCMIDLLGR 599
Query: 305 CGEIEEAYGVFRKM-QRRNTVSWTSMITGFAKQG 337
G ++EA + RKM + + V W +++ G
Sbjct: 600 AGRLKEAAEMIRKMPMKADVVIWGTLLAACRTHG 633
>gi|297849216|ref|XP_002892489.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338331|gb|EFH68748.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1014
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 168/459 (36%), Positives = 252/459 (54%), Gaps = 32/459 (6%)
Query: 45 INGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVY 104
+N ++K+++ + Y+ + ++ H VF++ W + H KS+
Sbjct: 559 MNWSNEKSFVCQNMTPCYL---FPLDVHLVFKQMLK-----WLPANQRHLHMAAGPKSLS 610
Query: 105 LYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYL 164
+ M + DEYTY+ LL C+ R G+ VHG V+ +G+ +R ++ LY
Sbjct: 611 FFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGEVIRTGFHRLGKVRIGVVELY- 669
Query: 165 MSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTM 224
SGG +G A+ +FD+MP R+VV WN +++G+ GD+ F +M R++VSW +M
Sbjct: 670 TSGGR--MGDAQKVFDEMPERNVVVWNLMVRGFCDSGDVQRGLSFFKQMSERSIVSWNSM 727
Query: 225 ISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFS 284
IS ++ G+ R+AL LF EM D+ +V L A +G L GKWIHS E N
Sbjct: 728 ISSLSKCGRDREALELFCEMIDQGFDPDEATVVTMLPISASLGVLDTGKWIHSTAESN-- 785
Query: 285 VGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL- 343
G +++ NAL+ Y G++E A +FRKMQRRN VSW +MI+G A G + +
Sbjct: 786 -GLIKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTMISGSAVNGKGESGID 844
Query: 344 ---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDL 388
TFLGVL+ CS+ G V+ G + F M + + ++PR EHYG MVDL
Sbjct: 845 LFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEPRTEHYGAMVDL 904
Query: 389 FSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAG 448
SR+G + EAF ++NMP+ N A+ GSLL CR H + +LA A +LV +I+P +
Sbjct: 905 MSRSGRIREAFEFLRNMPVNANAAMWGSLLSACRSHGDVKLAELAAMELV-KIEPGNSGN 963
Query: 449 YLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWV 487
Y+ L++N+YA RWQDV VR M K +RK GQS +
Sbjct: 964 YV-LLSNLYAEEGRWQDVEKVRTLMKKNCLRKTTGQSTI 1001
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 136/340 (40%), Gaps = 71/340 (20%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H ++I GF + + ++ Y + G + +A KVF++ + +WN M+RG S
Sbjct: 646 VHGEVIRTGFHRLGKVRIGVVELYTSGGRMGDAQKVFDEMPERNVVVWNLMVRGFCDSGD 705
Query: 99 PEKSVYLYKQ-------------------------------MIDKETEPDEYTYSFLLSV 127
++ + +KQ MID+ +PDE T +L +
Sbjct: 706 VQRGLSFFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTMLPI 765
Query: 128 CARCGLFREGEQVHGRVLASGYCSNVFIRTN-LMNLYLMSGGECGVGCARLLFDDMPARS 186
A G+ G+ +H ++G + N L++ Y SG + A +F M R+
Sbjct: 766 SASLGVLDTGKWIHSTAESNGLIKDFITVGNALVDFYCKSG---DLEAATAIFRKMQRRN 822
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM-R 245
VVSWN+ MISG A NGK + LF+ M
Sbjct: 823 VVSWNT-------------------------------MISGSAVNGKGESGIDLFDAMIE 851
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC 305
+V ++ + L+ C+ G ++ G+ + + E F + EP A++ + +
Sbjct: 852 EGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKL--EP-RTEHYGAMVDLMSRS 908
Query: 306 GEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQGYAQEALL 344
G I EA+ R M N W S+++ G + A L
Sbjct: 909 GRIREAFEFLRNMPVNANAAMWGSLLSACRSHGDVKLAEL 948
>gi|334182333|ref|NP_172105.4| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
gi|8810477|gb|AAF80138.1|AC024174_20 Contains similarity to an unknown protein T5J8.5 gi|4263522 from
Arabidopsis thaliana BAC T5J8 gb|AC004044 and contains
multiple PPR PF|01535 repeats. ESTs gb|AV565358,
gb|AV558710, gb|AV524184 come from this gene [Arabidopsis
thaliana]
gi|332189826|gb|AEE27947.1| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
Length = 1322
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 175/568 (30%), Positives = 294/568 (51%), Gaps = 58/568 (10%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAH 72
++S +L + +++ +T K L + +I +Q ++ + + + L A
Sbjct: 766 SASLSLAPPNLKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAV 825
Query: 73 KVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCG 132
+ + P+ ++N + +G P +S+ LY +M+ P YTYS L+ +
Sbjct: 826 STMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFAS 885
Query: 133 LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSW-- 190
F E Q H + G+ +V I+T L++ Y +G + AR +FD+MP R ++W
Sbjct: 886 RFGESLQAH--IWKFGFGFHVKIQTTLIDFYSATGR---IREARKVFDEMPERDDIAWTT 940
Query: 191 -----------------------------NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSW 221
N L+ GY+ G+++ A +F++MP ++++SW
Sbjct: 941 MVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISW 1000
Query: 222 TTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE 281
TTMI G +QN + R+A+++F +M + D+V + +SACA +G L++GK +H Y +
Sbjct: 1001 TTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQ 1060
Query: 282 NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQE 341
N V + V + +AL+ MY+ CG +E A VF + ++N W S+I G A G+AQE
Sbjct: 1061 NGFV----LDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQE 1116
Query: 342 AL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMV 386
AL +TF+ V +AC+H G VDEGR+ + M ++ I +EHYG MV
Sbjct: 1117 ALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMV 1176
Query: 387 DLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQA 446
LFS+AGL+ EA L+ NM +PN + G+LL GCRIH N +A KL+ ++P
Sbjct: 1177 HLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMV-LEP-MN 1234
Query: 447 AGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKP-PGQSWVQINGVLHDFVAGDSTYKQ 505
+GY L+ ++YA RW+DVA +R +M ++G+ K PG S ++I+ H F A D ++
Sbjct: 1235 SGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSA 1294
Query: 506 ASLIYKTLGEITMQAMQEGYKPDISELF 533
+ + L EI Q GY + ++
Sbjct: 1295 SDEVCLLLDEIYDQMGLAGYVQETENVY 1322
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 10/169 (5%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
M+ E IIP + T S ++ +L+I ++H + NGF YI + L+
Sbjct: 1023 MMEEGIIP-DEVTMSTVISACAHLGVLEIGK------EVHMYTLQNGFVLDVYIGSALVD 1075
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y G L A VF + WN +I G A ++++ ++ +M + +P+ T
Sbjct: 1076 MYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVT 1135
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGY--CSNVFIRTNLMNLYLMSG 167
+ + + C GL EG +++ R + Y SNV +++L+ +G
Sbjct: 1136 FVSVFTACTHAGLVDEGRRIY-RSMIDDYSIVSNVEHYGGMVHLFSKAG 1183
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 176/517 (34%), Positives = 265/517 (51%), Gaps = 56/517 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTS-GYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
Q+ SQ+I+N + L KL+ F V+S G+ +A + + + N MIR + S
Sbjct: 61 QMLSQMIMNYIPIDHLNLMKLIDFSVSSHGFAASALLFTQFYGFIDSDLCNSMIRCYTDS 120
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
SV++Y QM PD T+ +L A+ G+ +H ++ G+ SNV++
Sbjct: 121 NKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQMGFESNVYVS 180
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
T L+N+Y G C + A ++FDE+P R
Sbjct: 181 TALVNMY----GTCS------------------------------SVSDARQVFDEIPDR 206
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
N+VSW +I+G N R+ + +F EM+ A +V +V L ACA +G L G+WI
Sbjct: 207 NIVSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWID 266
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
Y++ N R + V + ALI MYA CG ++EA +F+ M+ +N +W +I+G+A
Sbjct: 267 DYIDHN----RLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMN 322
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G + AL +TFLGVL AC H G V+EGR +F M + +G++PRIEH
Sbjct: 323 GRGESALQAFSRMIMEKFKPDEVTFLGVLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEH 382
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YGCMVDL RAG +DEA L+Q M M+P+ + LL CRIH N +L +KL+ E+
Sbjct: 383 YGCMVDLLGRAGFLDEAQQLIQAMSMQPDPIIWRELLGACRIHGNIQLGEFAIKKLL-EL 441
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+P Y+ L+AN+YA +RW V VR+ M VRK PG S ++I+ V+++FV +
Sbjct: 442 EPNNGENYV-LLANLYARDQRWDKVGEVREMMDCRRVRKVPGCSSIEIDNVVYEFVVSNY 500
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+YK L ++ + GY D IEE
Sbjct: 501 IKPGFEEVYKLLADMNKKLKLAGYVADTGMASYDIEE 537
>gi|357119334|ref|XP_003561397.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Brachypodium distachyon]
Length = 635
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 158/421 (37%), Positives = 244/421 (57%), Gaps = 29/421 (6%)
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMP-ARSVVSWNSLL 194
G VH + +G ++++R L + Y G CG VG R +FD++P R VV+WN++L
Sbjct: 149 GSHVHALAVKAGAAGDLYVRNALTHFY----GVCGDVGAMRTVFDELPRVRDVVTWNAVL 204
Query: 195 KGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQV 254
GYV+ G + A ++F+EMP R+ VSW+T++ G + G+ AL +F +M V +++
Sbjct: 205 AGYVRAGMVRAAREVFEEMPVRDEVSWSTLVGGYVKEGELDVALGVFRDMVEKGVRVNEA 264
Query: 255 ALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGV 314
A+V ALSA A++G L+ G+++H V+ PV V++ AL+ M++ CG + A V
Sbjct: 265 AVVTALSAAAQMGLLEHGRFVHEVVQRTGM----PVSVNVGAALVDMFSKCGCVAVAREV 320
Query: 315 FRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFV 359
F M RR+ +W +MI G A G Q+A+ +TF+GVL+ACS G V
Sbjct: 321 FDGMPRRDVFAWNAMICGLASHGLGQDAVELFWRFLDEGLWPTDITFVGVLNACSRCGLV 380
Query: 360 DEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLL 419
EGR++F+ M + I+P +EHYGCMVDL RAGL+ EA L++ M + P+ + G++L
Sbjct: 381 AEGRRYFKLMVDKYRIEPEMEHYGCMVDLLGRAGLVSEAIELIEGMHIAPDPVLWGTVLS 440
Query: 420 GCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVR 479
C+ HN +L V KL+ E++P G+ L+A++YA AK+W +V VR+ M G
Sbjct: 441 ACKTHNLVDLGITVGNKLI-ELEPAH-DGHYVLLASIYAKAKKWDEVREVRKLMSSRGTG 498
Query: 480 KPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELF--LGIE 537
K G S ++ G LH F+ GD +K + IY L I + GY PD+S + +G E
Sbjct: 499 KSAGWSLMEAQGNLHKFLVGDMDHKDSVQIYNMLDMINRRLADAGYVPDVSSVLHDIGDE 558
Query: 538 E 538
E
Sbjct: 559 E 559
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 93/192 (48%), Gaps = 9/192 (4%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
+LA YV +G + A +VFE+ W+ ++ G+ + + ++ +++ M++K +
Sbjct: 203 VLAGYVRAGMVRAAREVFEEMPVRDEVSWSTLVGGYVKEGELDVALGVFRDMVEKGVRVN 262
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCAR 176
E LS A+ GL G VH V +G +V + L++++ +CG V AR
Sbjct: 263 EAAVVTALSAAAQMGLLEHGRFVHEVVQRTGMPVSVNVGAALVDMF----SKCGCVAVAR 318
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRG----DIDGAWKIFDEMPHRNVVSWTTMISGCAQNG 232
+FD MP R V +WN+++ G G ++ W+ DE +++ +++ C++ G
Sbjct: 319 EVFDGMPRRDVFAWNAMICGLASHGLGQDAVELFWRFLDEGLWPTDITFVGVLNACSRCG 378
Query: 233 KSRQALSLFNEM 244
+ F M
Sbjct: 379 LVAEGRRYFKLM 390
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 6/138 (4%)
Query: 2 LVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAF 61
+VE+ + N A AL+ LL+ +H + G + A L+
Sbjct: 254 MVEKGVRVNEAAVVTALSAAAQMGLLEHGRF------VHEVVQRTGMPVSVNVGAALVDM 307
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
+ G + A +VF+ WN MI G A + +V L+ + +D+ P + T+
Sbjct: 308 FSKCGCVAVAREVFDGMPRRDVFAWNAMICGLASHGLGQDAVELFWRFLDEGLWPTDITF 367
Query: 122 SFLLSVCARCGLFREGEQ 139
+L+ C+RCGL EG +
Sbjct: 368 VGVLNACSRCGLVAEGRR 385
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 170/500 (34%), Positives = 271/500 (54%), Gaps = 28/500 (5%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMI-DKETEP 116
++A ++ G + A FE+ WN MI G+ + +++ ++ +M+ D P
Sbjct: 218 MIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSP 277
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCAR 176
D +T + +LS CA GEQ+H ++ +G+ + + L+++Y GG V AR
Sbjct: 278 DRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGG---VETAR 334
Query: 177 LLFDDMPARS--VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
L + + + + +LL GY+K GD++ A IFD + R+VV+WT MI G Q+G
Sbjct: 335 RLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLY 394
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
+A++LF M + L A LS + + L GK IH ++ E VS+
Sbjct: 395 GEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKS----GEIYSVSV 450
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQGYAQEAL---------- 343
+NALI MYA G I A F ++ R+TVSWTSMI A+ G+A+EAL
Sbjct: 451 SNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEG 510
Query: 344 -----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEA 398
+T++GV SAC+H G V++GRQ+F+ M I P + HY CMVDLF RAGL+ EA
Sbjct: 511 LRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEA 570
Query: 399 FSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYA 458
++ MP++P+ GSLL CR++ N +L A++L+ ++PE + Y AL AN+Y+
Sbjct: 571 QEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLL-LEPENSGAYSAL-ANLYS 628
Query: 459 AAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITM 518
A +W++ A +R+ M V+K G SW+++ +H F D + Q + IY T+ +I
Sbjct: 629 ACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWD 688
Query: 519 QAMQEGYKPDISELFLGIEE 538
+ + GY PD + + +EE
Sbjct: 689 EIKKMGYVPDTASVLHDLEE 708
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 111/483 (22%), Positives = 220/483 (45%), Gaps = 90/483 (18%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHAR--- 95
+H ++I +G Y++ L+ Y +GY ++A K+F++ + WN ++ +A+
Sbjct: 36 VHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGD 95
Query: 96 --------SETPE--------------------KSVYLYKQMIDKETEPDEYTYSFLLSV 127
P+ K++ + +M+ + EP ++T + +L+
Sbjct: 96 MDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLAS 155
Query: 128 CARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGC-ARLLFDDMPARS 186
A G++VH ++ G NV + +L+N+Y +CG A+++FD M +
Sbjct: 156 VAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMY----AKCGDPMMAKVVFDRMVVKD 211
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM-R 245
+ SWN+++ +++ G +D A F++M R++V+W +MISG Q G +AL +F++M R
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLR 271
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC 305
+ + D+ L + LSACA + L +G+ IHS++ + G + + L NALI MY+ C
Sbjct: 272 DSMLSPDRFTLASVLSACANLEKLCIGEQIHSHI---VTTGFDISGIVL-NALISMYSRC 327
Query: 306 GEIE---------------------------------EAYGVFRKMQRRNTVSWTSMITG 332
G +E EA +F ++ R+ V+WT+MI G
Sbjct: 328 GGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVG 387
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
+ + G EA+ T +LS S + G+Q ++ I
Sbjct: 388 YEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYS 447
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
+ ++ ++++AG + A + + + S+++ H +AE A ++ + +
Sbjct: 448 -VSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM 506
Query: 438 VAE 440
+ E
Sbjct: 507 LME 509
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 157/523 (30%), Positives = 283/523 (54%), Gaps = 34/523 (6%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS-- 96
IH +++ GF YI L+ Y L A KVFE+ WN +I G+ +
Sbjct: 137 IHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGY 196
Query: 97 -----ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCS 151
E +S+ L+ +M++ + +PD T + +L C G G+ VH ++ SGY
Sbjct: 197 WNEALEIYYQSIKLFMEMVN-QFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYEC 255
Query: 152 NVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIF 210
+ L+N+Y +CG + ++ +F M + VSWNS++ Y++ G + + K+F
Sbjct: 256 DTTASNILINMY----AKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVF 311
Query: 211 DEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLK 270
+ M R++++W T+I+ C + L + + MR V D +++ L C+ + +
Sbjct: 312 ENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKR 371
Query: 271 LGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMI 330
GK IH + F +G E V + N LI MY+ CG + ++ VF+ M+ ++ V+WT++I
Sbjct: 372 QGKEIHGCI---FKLGLESD-VPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALI 427
Query: 331 TGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGI 375
+ G ++A+ + F+ ++ ACSH G V+EG +F M +++ I
Sbjct: 428 SACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKI 487
Query: 376 KPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQ 435
+PRIEHY C+VDL SR+ L+D+A + +MP+KP+ ++ G+LL CR+ + E+A +V++
Sbjct: 488 EPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSE 547
Query: 436 KLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHD 495
+++ E++P+ GY LV+N+YAA +W V ++R+ + G++K PG SW++I ++
Sbjct: 548 RII-ELNPDD-TGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYV 605
Query: 496 FVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
F G ++Q + K LG + +EGY ++ + I+E
Sbjct: 606 FGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDE 648
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 217/479 (45%), Gaps = 90/479 (18%)
Query: 32 TTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI--WNQM 89
TT L ++HS II G AKL+A Y ++ VF + +PS + WN +
Sbjct: 28 TTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVF-RLASPSNNVYLWNSI 86
Query: 90 IRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGY 149
IR + +++ LY + +PD YT+ +++ CA F + +H RVL G+
Sbjct: 87 IRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGF 146
Query: 150 CSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKI 209
S+++I L+++Y + AR +F++MP R VVSWNSL+ GY G + A +I
Sbjct: 147 GSDLYIGNALIDMYCRFN---DLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEI 203
Query: 210 FDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDL 269
+ Q++ LF EM + D + + + L AC +GDL
Sbjct: 204 Y------------------------YQSIKLFMEMVN-QFKPDLLTITSILQACGHLGDL 238
Query: 270 KLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSM 329
+ GK++H Y+ + G E + +N LI+MYA CG + + VF M+ +++VSW SM
Sbjct: 239 EFGKYVHDYM---ITSGYE-CDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSM 294
Query: 330 ITGFAKQGYAQEAL-----------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
I + + G ++L +T+ ++++C H + G + M G+ P
Sbjct: 295 INVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTE-GVTPD 353
Query: 379 I--------------------EHYGC---------------MVDLFSRAGLMDEAFSLVQ 403
+ E +GC +++++S+ G + +F + +
Sbjct: 354 MATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFK 413
Query: 404 NMPMKPNDAVLGSLLL-GCRIHNNAELASQVAQKL-VAEIDPEQAAGYLALVANVYAAA 460
MK D V + L+ C ++ + A + ++ A I P+ ++A VA ++A +
Sbjct: 414 --LMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPD----HVAFVAIIFACS 466
>gi|293335745|ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
gi|223948835|gb|ACN28501.1| unknown [Zea mays]
Length = 599
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 178/533 (33%), Positives = 284/533 (53%), Gaps = 72/533 (13%)
Query: 20 TRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINA-------- 71
R+ LL +R+ L ++ + F+ L+KLLA V++ A
Sbjct: 25 VRRCPGLLALRSAHAHLTRLRLPRLTAAFA-----LSKLLASCVSAPAPAAAQAAASSYA 79
Query: 72 HKVFEKTENPSTAIWNQMIRG-HARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
+F++ +P+ +N +IR A P +VY + + P+ +T +F L CA
Sbjct: 80 RNLFDQIPDPTAFCYNSLIRALPAAGSAPALAVY-RRMLRAGSPRPNSFTLAFALKACAA 138
Query: 131 CGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGEC-GVGCARLLFDDMPARSVVS 189
EG Q+H + L G ++ +++T L+NLY +C V AR +FD M
Sbjct: 139 VPAPGEGRQLHAQALRQGLATSAYVQTGLLNLY----AKCEQVALARTVFDGMA------ 188
Query: 190 WNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARV 249
GD +N+V+W+ M+SG ++ G +AL LF EM+ V
Sbjct: 189 -----------GD-------------KNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGV 224
Query: 250 GLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIE 309
D+V +V+ +SACA+ G L LGKW+H+Y++ V + L+ ALI MYA CG IE
Sbjct: 225 EPDEVTMVSVISACAKAGALDLGKWVHAYIDRKGIT----VDLELSTALIDMYAKCGLIE 280
Query: 310 EAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACS 354
A GVF M ++T +W++MI GFA G ++AL +TF+GVLSAC+
Sbjct: 281 RARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACA 340
Query: 355 HGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL 414
H G V++GR+++ M QN GIKP +E+YGCMVDL R+GL+D+A+S V MP+ PN +
Sbjct: 341 HSGLVEDGRRYWSIM-QNLGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVIW 399
Query: 415 GSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMI 474
+LL+ C+ N ++A ++L+ E++P Y+ L++N+YA+ +W V+ +R+KM
Sbjct: 400 RTLLVACKSSNRIDIAESATKRLL-ELEPHNPENYV-LLSNLYASNSQWDRVSYLRRKMK 457
Query: 475 KMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
V G+S ++ING LH+FV D ++ + I L E+ + + G+KP
Sbjct: 458 GKNVTAIAGRSSIEINGHLHEFVVSDDSHPEIREIRLVLREMADRVRRAGHKP 510
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 171/521 (32%), Positives = 269/521 (51%), Gaps = 61/521 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYV---TSGYLINAHKVFEKTENPSTAIWNQMIRGHA 94
Q+HSQ I +G + + L+ Y G + A K+F++ + + W MI G+
Sbjct: 292 QLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYV 351
Query: 95 -RSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNV 153
+ E+++ L++ MI P+ +T+S L CA R GEQV + G+ S
Sbjct: 352 QKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSS-- 409
Query: 154 FIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
V C NSL+ Y + G ID A K FD +
Sbjct: 410 ------------------VNCVA--------------NSLISMYARSGRIDDARKAFDIL 437
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK 273
+N++S+ T+I A+N S +AL LFNE+ +G + LS A IG + G+
Sbjct: 438 FEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGE 497
Query: 274 WIHSYV-EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
IH+ V + + + S+ NALI MY+ CG IE A+ VF M+ RN +SWTS+ITG
Sbjct: 498 QIHARVIKSGLKLNQ-----SVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITG 552
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
FAK G+A +AL +T++ VLSACSH G V+EG + F+ M G+ P
Sbjct: 553 FAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIP 612
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
R+EHY CMVD+ R+G + EA + +MP K + V + L CR+H N EL A K+
Sbjct: 613 RMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAA-KM 671
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
+ E +P A Y+ L++N+YA+ +W +V+ +R+ M + + K G SWV++ +H F
Sbjct: 672 IIEQEPHDPAAYI-LLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFY 730
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
GD+++ +A+ IY L ++++ + GY P++ + +EE
Sbjct: 731 VGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEE 771
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 183/405 (45%), Gaps = 53/405 (13%)
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
G L++A KVFEK + W MI + +++ L+ +MI EPD +T S ++
Sbjct: 219 GDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVI 278
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPAR 185
S CA L G+Q+H + + G + + L+N+Y + + AR +FD +
Sbjct: 279 SACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDH 338
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
+V SW +++ GYV++G G +AL LF M
Sbjct: 339 NVFSWTAMITGYVQKG------------------------------GYDEEALDLFRGMI 368
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSY-VEENFSVGREPVLVSLNNALIHMYAS 304
V + + L ACA + L++G+ + ++ V+ FS + + N+LI MYA
Sbjct: 369 LTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFS-----SVNCVANSLISMYAR 423
Query: 305 CGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGV 349
G I++A F + +N +S+ ++I +AK ++EAL TF +
Sbjct: 424 SGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASL 483
Query: 350 LSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKP 409
LS + G + +G Q + ++ G+K ++ ++SR G ++ AF + ++M +
Sbjct: 484 LSGAASIGTIGKGEQIHARVIKS-GLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDR- 541
Query: 410 NDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVA 454
N S++ G H A A ++ K++ E Y+A+++
Sbjct: 542 NVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLS 586
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 170/385 (44%), Gaps = 67/385 (17%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI-WNQMIRGHARSE 97
+H ++ + + L L++ Y G A +F+ + I W+ M+ A +
Sbjct: 88 VHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNN 147
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ + MI+ P+EY ++ C+ G+ + G V+ +GY +
Sbjct: 148 MGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQS----- 202
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
+ VGC + DM +KG RGD+ A+K+F++MP RN
Sbjct: 203 -----------DVCVGCGLI---DM----------FVKG---RGDLVSAFKVFEKMPERN 235
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
V+WT MI+ Q G + +A+ LF EM + D+ L +SACA + L LG+ +HS
Sbjct: 236 AVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHS 295
Query: 278 Y-VEENFSVGREPVLVSLNNALIHMYASC---GEIEEAYGVFRKMQRRNTVSWTSMITGF 333
+ ++ R + LI+MYA C G + A +F ++ N SWT+MITG+
Sbjct: 296 QAIRHGLTLDR-----CVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGY 350
Query: 334 A-KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
K GY +EAL TF L AC++ + G Q F +K
Sbjct: 351 VQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVF-----THAVKL 405
Query: 378 RIEHYGC----MVDLFSRAGLMDEA 398
C ++ +++R+G +D+A
Sbjct: 406 GFSSVNCVANSLISMYARSGRIDDA 430
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 159/362 (43%), Gaps = 54/362 (14%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
M++ +IP N T S L + L+I Q+ + + GFS N + L++
Sbjct: 367 MILTHVIP-NHFTFSSTLKACANLAALRIGE------QVFTHAVKLGFSSVNCVANSLIS 419
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y SG + +A K F+ + +N +I +A++ E+++ L+ ++ D+ +T
Sbjct: 420 MYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFT 479
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLF 179
++ LLS A G +GEQ+H RV+ SG N + L+++Y CG + A +F
Sbjct: 480 FASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMY----SRCGNIESAFQVF 535
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR----NVVSWTTMISGCAQNGKSR 235
+DM R+V+SW S++ G+ K G A ++F +M N+V++ ++S C+ G
Sbjct: 536 EDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVN 595
Query: 236 QALSLFNEMRR------------------ARVG---------------LDQVALVAALSA 262
+ F M R G D + L A
Sbjct: 596 EGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGA 655
Query: 263 CAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRN 322
C G+L+LGK + E +EP + L ++YAS + +E + + M+ +N
Sbjct: 656 CRVHGNLELGKHAAKMIIE-----QEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKN 710
Query: 323 TV 324
+
Sbjct: 711 LI 712
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 117/283 (41%), Gaps = 54/283 (19%)
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
K++ + M+ + + PD TYS L C R F G VH ++ S
Sbjct: 48 HKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQS------------ 95
Query: 160 MNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM-PHRNV 218
D+ S V+ NSL+ Y K G + A IF M R++
Sbjct: 96 ---------------------DLQLDS-VTLNSLISLYSKCGQWEKATSIFQLMGSSRDL 133
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
+SW+ M+S A N +AL F +M ++ AA AC+ + +G I +
Sbjct: 134 ISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGF 193
Query: 279 VEENFSVGREPVLVSLNNALIHMYASC-GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
V G V + LI M+ G++ A+ VF KM RN V+WT MIT + G
Sbjct: 194 V---VKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFG 250
Query: 338 YAQEALLTFL---------------GVLSACSHGGFVDEGRQF 365
YA EA+ FL GV+SAC++ + G+Q
Sbjct: 251 YAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQL 293
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 162/516 (31%), Positives = 268/516 (51%), Gaps = 56/516 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH + + F ++ L+ Y G ++ AHKVF+K W +I G+A+++
Sbjct: 72 KIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQND 131
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
P +++ L M+ +P+ +T++ LL G Q+H + + +V++ +
Sbjct: 132 MPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGS 191
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y + G +D A +FD++ +N
Sbjct: 192 ALLDMY----------------------------------ARCGKMDMATAVFDKLDSKN 217
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VSW +ISG A+ G AL +F EM+R + S A IG L+ GKW+H+
Sbjct: 218 GVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHA 277
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
++ ++ R+ + + N ++ MYA G + +A VF ++ ++ V+W SM+T FA+ G
Sbjct: 278 HMVKS----RQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYG 333
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+EA+ +TFL +L+ACSHGG V EG+ +F+ M + + ++P IEHY
Sbjct: 334 LGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFD-MIKEYNLEPEIEHY 392
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
+VDL RAGL++ A + MPM+P AV G+LL CR+H NA++ Q A V ++D
Sbjct: 393 VTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVG-QFAADHVFQLD 451
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P+ + G L+ N+YA+ W A VR+ M GV+K P SWV+I +H FVA D T
Sbjct: 452 PDDS-GPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDT 510
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ +A IYK EI+M+ +EGY PD+ + L ++E
Sbjct: 511 HPRAEEIYKMWDEISMKIRKEGYVPDMDYVLLHVDE 546
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 163/504 (32%), Positives = 269/504 (53%), Gaps = 63/504 (12%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H II GF Y+ L+ FY +A +VF++ W +I G+ R+
Sbjct: 55 QVHGVIIKMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAG 114
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++V L+ +M + EP+ T+ +L C R G G+ +HG S +
Sbjct: 115 LFDEAVGLFLRM---DVEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAF-------- 163
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
GVG VS N+L+ YVK G + GA ++FDE+ ++
Sbjct: 164 -------------GVGLE------------VS-NALMDMYVKCGCLPGAKQVFDELAEKD 197
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+VSWT++ISG Q ++AL LF +M+ + + D + L + LSACA +G L G+W+H
Sbjct: 198 IVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGIILTSVLSACARLGALDYGRWVHE 257
Query: 278 YVEENFSVGREPVL--VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
+++ R+ + + + A++ MYA CG IE + +F M +N ++W +++ G A
Sbjct: 258 HID------RKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGLAM 311
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMN-QNWGIKPRI 379
G+A + L +TFL +L+AC H G V+EGRQ+F M Q + + PR+
Sbjct: 312 HGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQYFNWMKGQQYNLPPRL 371
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
EHYGCMVDL RA L+DEA L + MPM P+ ++G+LL C+ + N EL ++ + V
Sbjct: 372 EHYGCMVDLLCRARLLDEALELTKAMPMSPDVRIMGALLSACKENGNTELPQEILDRFV- 430
Query: 440 EIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG 499
E+D + Y+ L++N++A +RW DV +R+ M + G++KPPG + ++++G H+F+ G
Sbjct: 431 ELDSHDSGVYV-LLSNIHAINQRWDDVTRIRRLMKEKGIKKPPGSTVIELDGKAHEFIVG 489
Query: 500 DSTYKQASLIYKTLGEITMQAMQE 523
D+ + Q I L ++ Q E
Sbjct: 490 DTRHPQDKRIRLLLKILSDQIFLE 513
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 176/369 (47%), Gaps = 60/369 (16%)
Query: 86 WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVL 145
+N ++ G+A + P+ + +Y++++ PD +T+ +L CA+ EG QVHG ++
Sbjct: 2 FNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVII 61
Query: 146 ASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDG 205
G+ N+++ +L++ Y + G A +FD+M R VVSW ++ GYV+ G
Sbjct: 62 KMGFVCNIYVENSLVHFYSVCK---RFGDASRVFDEMLVRDVVSWTGVISGYVRAG---- 114
Query: 206 AWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAE 265
+FDE A+ LF R V + V+ L AC
Sbjct: 115 ---LFDE------------------------AVGLF---LRMDVEPNAATFVSVLVACGR 144
Query: 266 IGDLKLGKWIHSY-VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTV 324
G L +GK IH + F VG E ++NAL+ MY CG + A VF ++ ++ V
Sbjct: 145 KGYLSVGKGIHGLSFKSAFGVGLE-----VSNALMDMYVKCGCLPGAKQVFDELAEKDIV 199
Query: 325 SWTSMITGFAKQGYAQEALLTF---------------LGVLSACSHGGFVDEGRQFFECM 369
SWTS+I+G + +EAL F VLSAC+ G +D GR E +
Sbjct: 200 SWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHI 259
Query: 370 NQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAEL 429
++ IK I+ MVD++++ G ++ + + MP K N +LL G +H +A
Sbjct: 260 DRK-AIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHK-NVLTWNALLNGLAMHGHAYK 317
Query: 430 ASQVAQKLV 438
++ +++V
Sbjct: 318 VLELFEEMV 326
>gi|15222917|ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g50270
gi|5734776|gb|AAD50041.1|AC007980_6 Hypothetical protein [Arabidopsis thaliana]
gi|332194410|gb|AEE32531.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 164/512 (32%), Positives = 274/512 (53%), Gaps = 59/512 (11%)
Query: 25 SLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTA 84
++ ++R++ FQ H+ I+ G ++ L++ Y +SG A ++F+ E+
Sbjct: 113 AVFKLRDSNP--FQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVV 170
Query: 85 IWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRV 144
W MI G R+ + +++ + +M +E T +L + R G VHG
Sbjct: 171 TWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLY 230
Query: 145 LASGYCS-NVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDI 203
L +G +VFI ++L+++Y G+C +DD
Sbjct: 231 LETGRVKCDVFIGSSLVDMY----GKCSC------YDD---------------------- 258
Query: 204 DGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSAC 263
A K+FDEMP RNVV+WT +I+G Q+ + + +F EM ++ V ++ L + LSAC
Sbjct: 259 --AQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSAC 316
Query: 264 AEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNT 323
A +G L G+ +H Y+ +N S+ + + LI +Y CG +EEA VF ++ +N
Sbjct: 317 AHVGALHRGRRVHCYMIKN-SI---EINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNV 372
Query: 324 VSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFEC 368
+WT+MI GFA GYA++A +TF+ VLSAC+HGG V+EGR+ F
Sbjct: 373 YTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLS 432
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAE 428
M + ++P+ +HY CMVDLF R GL++EA +L++ MPM+P + V G+L C +H + E
Sbjct: 433 MKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYE 492
Query: 429 LASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
L A +++ ++ P + Y L+AN+Y+ ++ W +VA VR++M V K PG SW++
Sbjct: 493 LGKYAASRVI-KLQPSHSGRY-TLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIE 550
Query: 489 INGVLHDFVAGDSTYK-QASLIYKTLGEITMQ 519
+ G L +F+A D ++ +YKTL + +Q
Sbjct: 551 VKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQ 582
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 176/532 (33%), Positives = 277/532 (52%), Gaps = 68/532 (12%)
Query: 27 LQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIW 86
L++ N K +H + ++ ++ +L+ Y+ SG + +A +VFE+ W
Sbjct: 259 LEVFNVGKA---VHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPW 315
Query: 87 NQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLA 146
+ MI +A+SE E+++ ++ +M P+++T + LL CA + G Q+H V+
Sbjct: 316 SFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVK 375
Query: 147 SGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGA 206
G NVF+ LM++Y K G ++ +
Sbjct: 376 VGLDMNVFVSNALMDMY----------------------------------AKCGRMENS 401
Query: 207 WKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEI 266
++F E P+ VSW T+I G Q G +AL LF +M +V +V + L ACA I
Sbjct: 402 LQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGI 461
Query: 267 GDLKLGKWIHSY-----VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR 321
L+ G IHS ++N VG NALI MYA CG I++A VF ++
Sbjct: 462 AALEPGSQIHSLSVKTIYDKNTVVG---------NALIDMYAKCGNIKDARLVFDMLREH 512
Query: 322 NTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFF 366
+ VSW +MI+G++ G EAL +TF+G+LSACS+ G +D G+ +F
Sbjct: 513 DQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYF 572
Query: 367 ECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNN 426
+ M + + I+P EHY CMV L R+G +D+A LV +P +P+ V +LL C IHN+
Sbjct: 573 KSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHND 632
Query: 427 AELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSW 486
EL AQ+ V EI+PE A ++ L++N+YA A+RW +VA++R M + G+RK PG SW
Sbjct: 633 VELGRISAQR-VLEIEPEDEATHV-LLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSW 690
Query: 487 VQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++ G +H F GD+++ LI L + M+A EGY PD S + L +E+
Sbjct: 691 IENQGRVHYFSVGDTSHPDTKLINGMLEWLNMKARNEGYVPDFSSVLLDVED 742
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 127/534 (23%), Positives = 223/534 (41%), Gaps = 102/534 (19%)
Query: 14 SSKALTTRQIFSLLQ--IRN-TTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLIN 70
SS T SLLQ IRN T +H +II G + LL FYV L +
Sbjct: 38 SSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPD 97
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
A K+F++ + +T + +I+G+++ +++ L+ ++ + E + + +S +L +
Sbjct: 98 AAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVS 157
Query: 131 CGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVG-CARLLFDDMPARSVVS 189
+ G VH V G+ S+ F+ T L++ Y + CG CAR +FD + + +VS
Sbjct: 158 AEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSV----CGYAECARQVFDAIEYKDMVS 213
Query: 190 WNSLLKGYVKRGDIDGAWKIFDEM------PHR-------------NVVSWTTMISGCA- 229
W ++ YV+ + + K+F M P+ V + + GCA
Sbjct: 214 WTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAF 273
Query: 230 -------------------QNGKSRQALSLFNE--------------------------- 243
++G AL +F E
Sbjct: 274 KTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIE 333
Query: 244 ----MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
MRR V +Q L + L ACA + DL+LG IH +V VG + + V ++NAL+
Sbjct: 334 MFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHV---VKVGLD-MNVFVSNALM 389
Query: 300 HMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALL--------------- 344
MYA CG +E + +F + VSW ++I G+ + G ++AL+
Sbjct: 390 DMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEV 449
Query: 345 TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQN 404
T+ VL AC+ ++ G Q + K + ++D++++ G + +A LV +
Sbjct: 450 TYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVG-NALIDMYAKCGNIKDA-RLVFD 507
Query: 405 MPMKPNDAVLGSLLLGCRIHN-NAELASQVAQKLVAEIDPEQAA--GYLALVAN 455
M + + +++ G +H E L E P++ G L+ +N
Sbjct: 508 MLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSN 561
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 141/347 (40%), Gaps = 60/347 (17%)
Query: 93 HARSETP----EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASG 148
H +S T + +L ++ E + Y Y LL C R G G+ +H ++ G
Sbjct: 15 HCKSNTALCIITQRSFLAQRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKG 74
Query: 149 YCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWK 208
C ++F L+N Y+ + A LFD+MP R+ VS+ +L++GY
Sbjct: 75 NCLDLFANNILLNFYVKYD---SLPDAAKLFDEMPDRNTVSFVTLIQGY----------- 120
Query: 209 IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGD 268
+Q + +A+ LF+ ++ L+ L
Sbjct: 121 --------------------SQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEW 160
Query: 269 LKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTS 328
KLG +H+ V + +G + + ALI Y+ CG E A VF ++ ++ VSWT
Sbjct: 161 AKLGFSVHACV---YKLGFDSDAF-VGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTG 216
Query: 329 MITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNW 373
M+ + + +E+L TF VL AC + G+ C +
Sbjct: 217 MVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTS 276
Query: 374 GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
++ ++DL+ ++G +D+A + + MP +D + S ++
Sbjct: 277 YLEELFVGVE-LIDLYIKSGDVDDALQVFEEMP--KDDVIPWSFMIA 320
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 180/550 (32%), Positives = 283/550 (51%), Gaps = 63/550 (11%)
Query: 10 NPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLI 69
NP+++ L LL+ T TL Q+H+ +I G Y L+++L T +
Sbjct: 5 NPSSNHPTL------QLLEKCKTLDTLKQVHAHMITTGLIFHTYPLSRILLISSTIVF-T 57
Query: 70 NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVY-LYKQMIDKET-EPDEYTYSFLLSV 127
+A +F NP+ ++N +I A + + LY +++ T +P+ +T+ L
Sbjct: 58 HALSIFNHIPNPTIFLYNTLISSLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKA 117
Query: 128 CARCGLFREGEQVHGRVLA--SGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPA 184
C R G +H VL C + F++ L+N Y +CG VG R LF+ +
Sbjct: 118 CGSQPWLRHGRALHTHVLKFLEPTC-DPFVQAALLNYY----AKCGKVGACRYLFNQISK 172
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
+ SWNS+L YV GA C S + L+LF EM
Sbjct: 173 PDLASWNSILSAYVHNS---GAI--------------------CEDVSLSLEVLTLFIEM 209
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV-EENFSVGREPVLVSLNNALIHMYA 303
+++ + ++V LVA +SACAE+G L G W H YV + N + + ALI MY+
Sbjct: 210 QKSLIKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNH-----FVGTALIDMYS 264
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLG 348
CG ++ A +F ++ R+T+ + +MI GFA GY +AL +T +
Sbjct: 265 KCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDDVTLVV 324
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
+ +CSH G V+EG FE M + +G++P++EHYGC+VDL RAG + EA V NMPMK
Sbjct: 325 TMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNMPMK 384
Query: 409 PNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAA 468
PN + SLL R+H N E+ V + L+ +++PE + Y+ L++N+YA+ RW DV
Sbjct: 385 PNAVIWRSLLGAARVHGNLEIGEVVLKHLI-QLEPETSGNYV-LLSNMYASINRWDDVKR 442
Query: 469 VRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
VR+ M G+ K PG S V++ G +H+F+ GD T+ ++ IY L E++ + + G+KP
Sbjct: 443 VRKLMKDHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEEMSRRLHEYGHKPR 502
Query: 529 ISELFLGIEE 538
E+ IEE
Sbjct: 503 TLEVLFDIEE 512
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 165/511 (32%), Positives = 258/511 (50%), Gaps = 55/511 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIHS I NGF Y+ L+ Y G L A K+ E E W MI G+ + +
Sbjct: 367 QIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHD 426
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E+++ +K+M D PD + S CA R+G Q+H RV SGY +++ I
Sbjct: 427 FCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISI-- 484
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
WN+L+ Y + G + A+ +F E+ H++
Sbjct: 485 --------------------------------WNTLVNLYARCGRSEEAFSLFREIEHKD 512
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
++W +ISG Q+ +QAL +F +M +A + ++A+SA A + D+K GK +H
Sbjct: 513 EITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHG 572
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
+ V NALI +Y CG IE+A +F +M RN VSW ++IT ++ G
Sbjct: 573 RAVKTGHTSETEV----ANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHG 628
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
EAL +TF+GVL+ACSH G V+EG +F+ M+ +G+ P +HY
Sbjct: 629 RGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHY 688
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
C+VD+ RAG +D A V MP+ N + +LL C++H N E+ ++A K + E++
Sbjct: 689 ACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIG-ELAAKHLLELE 747
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P +A Y+ L++N YA +W + VR+ M G+RK PG+SW+++ +H F GD
Sbjct: 748 PHDSASYV-LLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRL 806
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELF 533
+ + IYK L E+ + + GYK + LF
Sbjct: 807 HPLSDQIYKFLSELNDRLSKIGYKQENPNLF 837
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 127/502 (25%), Positives = 209/502 (41%), Gaps = 99/502 (19%)
Query: 2 LVEEIIPANP----------ATSSKALTTRQIFSLLQI----RNTTKTLFQIHSQIIING 47
L + I+P NP A+ +AL + + LQ N + +IH+ ++ G
Sbjct: 14 LAKFIVPDNPEKILSLVAAKASHHRALGSADLTCALQACRGRGNRWPLVLEIHATSVVRG 73
Query: 48 FSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYK 107
I L+ Y +G + A +VF++ + W M+ G+A+S +++ LY
Sbjct: 74 LGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYS 133
Query: 108 QMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSG 167
QM P Y S +LS C + LF +G +H +V +CS F+ L+ LYL G
Sbjct: 134 QMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFG 193
Query: 168 ---------------------------GECGVG-CARLLFDDMPARSV------------ 187
+CG G CA +FD+M +
Sbjct: 194 SFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLA 253
Query: 188 ---------------------------VSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVS 220
++ SLL YVK GDI+ A IF+ NVV
Sbjct: 254 ACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVL 313
Query: 221 WTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVE 280
W M+ Q ++ +F +M+ + +Q L C G ++LG+ IHS
Sbjct: 314 WNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSI 373
Query: 281 ENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQ 340
+N G E + ++ LI MY+ G +++A + +++R+ VSWTSMI G+ + + +
Sbjct: 374 KN---GFESDMY-VSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCE 429
Query: 341 EALLTF------------LGVLSACSHGGFVDEGRQFFECMNQNW--GIKPRIEHYGCMV 386
EAL TF +G+ SA S + RQ + + + G I + +V
Sbjct: 430 EALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLV 489
Query: 387 DLFSRAGLMDEAFSLVQNMPMK 408
+L++R G +EAFSL + + K
Sbjct: 490 NLYARCGRSEEAFSLFREIEHK 511
>gi|15220808|ref|NP_173207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75175206|sp|Q9LNP2.1|PPR47_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g17630
gi|8778465|gb|AAF79473.1|AC022492_17 F1L3.33 [Arabidopsis thaliana]
gi|332191495|gb|AEE29616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 731
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 172/548 (31%), Positives = 291/548 (53%), Gaps = 67/548 (12%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
H+Q+I G + +++ +LL Y +G + +A+ +F + + WN MI+G ++
Sbjct: 180 FHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYD 239
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE---------------------- 136
E +V +++ M +E +PDE T++ +LS ++CG F +
Sbjct: 240 CESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAV 299
Query: 137 -------------GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMP 183
E+VHG V+ G+ + R L+++Y G + V A LF +
Sbjct: 300 FFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVY---GKQGKVKDAEHLFRQIR 356
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIF---DEMPH-----RNVVSWTTMISGCAQNGKSR 235
+ + SWNSL+ +V G +D A +F +EM H NVV+WT++I GC G+
Sbjct: 357 NKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGD 416
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
+L F +M+ ++V + V + LS CAE+ L LG+ IH +V + E +LV
Sbjct: 417 DSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIR--TSMSENILV--Q 472
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF--------- 346
NAL++MYA CG + E VF ++ ++ +SW S+I G+ G+A++AL F
Sbjct: 473 NALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFH 532
Query: 347 ------LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFS 400
+ VLSACSH G V++GR+ F M++ +G++P+ EHY C+VDL R G + EA
Sbjct: 533 PDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASE 592
Query: 401 LVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAA 460
+V+NMPM+P VLG+LL CR+H N ++A +A +L + ++PE+ Y+ L++N+Y+A
Sbjct: 593 IVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQL-SVLEPERTGSYM-LLSNIYSAG 650
Query: 461 KRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQA 520
RW++ A VR K ++K G SW+++ + F +G + IY L ++
Sbjct: 651 GRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHM 710
Query: 521 MQEGYKPD 528
+++G D
Sbjct: 711 LKKGPTHD 718
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 178/371 (47%), Gaps = 34/371 (9%)
Query: 26 LLQIRNTTKTLFQIHSQIIINGF-SQKNYILAKLLAFYVTSGYLINAHKVFEKTEN---P 81
LL + T + Q+H+Q++++ F + + A L++ Y G L++A VFE
Sbjct: 62 LLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLS 121
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVH 141
+WN +++ + E ++ LY+ M + D Y +L C G F H
Sbjct: 122 DLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFH 181
Query: 142 GRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRG 201
+V+ G N+ + L+ LY +G +G A LF +MP R+ +SWN ++KG+ +
Sbjct: 182 TQVIQIGLKENLHVVNELLTLYPKAG---RMGDAYNLFVEMPVRNRMSWNVMIKGFSQEY 238
Query: 202 DIDGAWKIFDEMPHR----NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
D + A KIF+ M + V+WT+++S +Q GK L F+ MR + + AL
Sbjct: 239 DCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALA 298
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
S CAE+ L + + +H YV + G E L S NALIH+Y G++++A +FR+
Sbjct: 299 VFFSVCAELEALSIAEKVHGYVIKG---GFEEYLPS-RNALIHVYGKQGKVKDAEHLFRQ 354
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEAL-------------------LTFLGVLSACSHGGF 358
++ + SW S+IT F G EAL +T+ V+ C+ G
Sbjct: 355 IRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGR 414
Query: 359 VDEGRQFFECM 369
D+ ++F M
Sbjct: 415 GDDSLEYFRQM 425
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 46/103 (44%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH +I S+ + L+ Y G L VFE + WN +I+G+
Sbjct: 455 EIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHG 514
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
EK++ ++ +MI PD +LS C+ GL +G ++
Sbjct: 515 FAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREI 557
>gi|225428400|ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
gi|297744424|emb|CBI37686.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 170/522 (32%), Positives = 280/522 (53%), Gaps = 60/522 (11%)
Query: 37 FQIHSQIIINGFSQKNYI-LAKLLAFYVTS--GYLINAHKVFEKTENPSTAIWNQMIRGH 93
Q+H+QI+ + +K L L F S G L AH + ++ N MIR +
Sbjct: 10 MQLHAQILKSPDPKKQTRNLTPLFTFAALSPAGDLTYAHLILNSLSTQNSFFHNTMIRAY 69
Query: 94 ARSETPEKSVYLYKQMIDKET--EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCS 151
+++ P ++++L+ M+ + T PD++TY FLL CAR R G+Q+HG + SG S
Sbjct: 70 SQTPDPTQALHLFLSMLCQPTSPRPDKFTYPFLLKSCARLKQPRVGKQLHGLIYKSGLES 129
Query: 152 NVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFD 211
+ ++ L+++Y CG K G A+K+F
Sbjct: 130 DRYVSNGLIHMY----SSCG---------------------------KSGR---AYKVFG 155
Query: 212 EMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKL 271
+M R+VVSWT+MI G + ++ +A+ LF EM V ++ +V+ L ACA+ G + +
Sbjct: 156 KMRDRDVVSWTSMIDGFVDDDRALEAIRLFEEMVEDGVEPNEATVVSVLRACADAGAVGM 215
Query: 272 GKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMIT 331
G+ + +EE +G E ++ ALI MYA CG I A VF + ++ +WT+MI+
Sbjct: 216 GRRVQGVIEER-KIGLE---ANVRTALIDMYAKCGSIGSARKVFDGIVNKDVFAWTAMIS 271
Query: 332 GFAKQGYAQEALLTF---------------LGVLSACSHGGFVDEGRQFFECMNQNWGIK 376
G A G +EA+ F VLSAC + G+ EG +F M +GIK
Sbjct: 272 GLANHGLCEEAVTLFDQMESFGLRPDERTMTAVLSACRNAGWFSEGFAYFNSMWCKYGIK 331
Query: 377 PRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQ- 435
P I+HYGCMVDL +R G +DEA ++ MP++P+ + +L+ ++H + + + Q+ +
Sbjct: 332 PTIQHYGCMVDLLARTGHLDEAEEFIRKMPIEPDVVLWRTLIWASKVHGDIDRSEQLMKD 391
Query: 436 KLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHD 495
+ + ++D + Y+ L+ NVYA+A +W D A +R+ M + G+ KPPG S ++++G++H+
Sbjct: 392 RGLLKMDSDDCGSYV-LLGNVYASAGKWHDKAKMRELMNQKGLSKPPGCSRIEVDGLVHE 450
Query: 496 FVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIE 537
F AGDS + +A IY L E+ + EGY P +SE+ L I+
Sbjct: 451 FAAGDSGHIEAEKIYAKLDEVEERLKAEGYHPKLSEVLLEID 492
>gi|255574750|ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532320|gb|EEF34121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 602
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 162/491 (32%), Positives = 272/491 (55%), Gaps = 28/491 (5%)
Query: 44 IINGFSQKN-YILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKS 102
+ + S +N Y +L+ Y G + A K+F+K WN M+ +A+S +
Sbjct: 108 VFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMPEKDVVSWNTMVIAYAKSGFCNDA 167
Query: 103 VYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNL 162
+ Y+++ +EY+++ LL++C + +Q HG+VL +G+ SN+ I +++++
Sbjct: 168 LRFYRELRRLGIGYNEYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVISSSVLDA 227
Query: 163 YLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSW 221
Y +C +G AR LFD+M R V++W +++ GY + GD++ A ++FD MP +N V+W
Sbjct: 228 Y----AKCSEMGDARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAW 283
Query: 222 TTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE 281
T++I+G A++ +AL LF +M + DQ + L A A I L GK IH Y+
Sbjct: 284 TSLIAGYARHDLGHKALELFTKMMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIR 343
Query: 282 NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAKQGYAQ 340
++ ++VS +LI MY+ CG +E VF M + + V W ++I+ A+ G Q
Sbjct: 344 T-NIRPNTIVVS---SLIDMYSKCGCLEVGRLVFDLMGDKWDVVLWNTIISSLAQHGRGQ 399
Query: 341 EAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCM 385
EA+ +T + +L+ACSH G V EG + +E + G+ P EHY C+
Sbjct: 400 EAIQMFDDMVRLGMKPDRITLIVLLNACSHSGLVQEGLRLYESITSCHGVIPNQEHYACL 459
Query: 386 VDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQ 445
+DL RAG D + ++ MP KPND + +LL CR+H N E +VA+K++ E+DP+
Sbjct: 460 IDLLGRAGHFDTLMNQLEKMPCKPNDEIWNALLGVCRMHGNIEFGREVAEKII-ELDPQS 518
Query: 446 AAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQ 505
+A Y+ L+++++AA RW+ V VRQ M + VRK SW++I +H F A D +
Sbjct: 519 SAAYV-LLSSIHAAVGRWELVENVRQLMNERHVRKDRAISWIEIENKVHSFTASDRLHPL 577
Query: 506 ASLIYKTLGEI 516
+IY L ++
Sbjct: 578 KEVIYLALKQL 588
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 128/225 (56%), Gaps = 10/225 (4%)
Query: 120 TYSFLLSVCARCGLFREGEQVHGRVLASGYC-SNVFIRTNLMNLYLMSGGECG-VGCARL 177
T ++LL CA + G+ VH + +G N F+ +L+N+Y +CG A
Sbjct: 52 TLAYLLQQCANTKSLKLGKWVHLHLKVTGLKRPNTFLANHLINMY----SKCGDYPSAYK 107
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
+FD+M R++ SWN +L GY K G I A K+FD+MP ++VVSW TM+ A++G A
Sbjct: 108 VFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMPEKDVVSWNTMVIAYAKSGFCNDA 167
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
L + E+RR +G ++ + L+ C ++ +L+L K H V G LV ++++
Sbjct: 168 LRFYRELRRLGIGYNEYSFAGLLNICVKVKELELSKQAHGQV---LVAGFLSNLV-ISSS 223
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEA 342
++ YA C E+ +A +F +M R+ ++WT+M++G+A+ G + A
Sbjct: 224 VLDAYAKCSEMGDARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAA 268
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 141/319 (44%), Gaps = 49/319 (15%)
Query: 229 AQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGRE 288
+ G+ QA+S + R + L L L CA LKLGKW+H +++ G +
Sbjct: 26 SSQGQLFQAISSLGLLSRNGIRLPSKTLAYLLQQCANTKSLKLGKWVHLHLK---VTGLK 82
Query: 289 PVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEA------ 342
L N LI+MY+ CG+ AY VF +M RN SW M++G+AK G + A
Sbjct: 83 RPNTFLANHLINMYSKCGDYPSAYKVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDK 142
Query: 343 -----LLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDE 397
++++ ++ A + GF ++ +F+ + G + +S AGL++
Sbjct: 143 MPEKDVVSWNTMVIAYAKSGFCNDALRFYR----------ELRRLGIGYNEYSFAGLLNI 192
Query: 398 AFSLVQ-NMPMKPNDAV-----LGSLLLGCRIHNNAELASQV--AQKLVAEIDPEQAAGY 449
+ + + + + V L +L++ + + S++ A++L E+ +
Sbjct: 193 CVKVKELELSKQAHGQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLFDEMIIRDVLAW 252
Query: 450 LALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLI 509
+V+ YA +W DV A R+ M + P +W + +AG Y + L
Sbjct: 253 TTMVSG-YA---QWGDVEAARELFDLMPEKNPV--AWTSL-------IAG---YARHDLG 296
Query: 510 YKTLGEITMQAMQEGYKPD 528
+K L E+ + M +PD
Sbjct: 297 HKAL-ELFTKMMALNIRPD 314
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 174/510 (34%), Positives = 273/510 (53%), Gaps = 57/510 (11%)
Query: 46 NGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYL 105
G S KN ++ +LL G + A ++F++ P +WN +++G+ ++ P+K+V +
Sbjct: 63 TGLSIKNALITQLLTSLTLLGDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSV 122
Query: 106 YKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLM 165
Y +M PD +T+ F++ CA G +HG V+ G +RT LM +Y+
Sbjct: 123 YGKMRHLGVRPDPFTFPFVIKACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVK 182
Query: 166 SGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMI 225
G +GCA LF M R +V+WN+L I
Sbjct: 183 FG---ELGCAEFLFGSMVERDLVAWNAL-------------------------------I 208
Query: 226 SGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSV 285
+ C Q G S +AL F EM A + D V +V+ALSAC +G L+ G+ I+ + E
Sbjct: 209 AVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFAREE--- 265
Query: 286 GREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-- 343
G + ++ ++NA + M A CG++++A +F +M +RN +SW+++I G+A G +++AL
Sbjct: 266 GIDSNII-VHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKALAL 324
Query: 344 -------------LTFLGVLSACSHGGFVDEGRQFFECMNQ--NWGIKPRIEHYGCMVDL 388
+TFL VLSACSH G V+EG Q+F M Q + I+PR EHY CMVDL
Sbjct: 325 FSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACMVDL 384
Query: 389 FSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAG 448
R+G ++EA++ ++ MP++ + + G+LL C IH N +L VA L+ E+ PE A
Sbjct: 385 LGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIHQNIKLGQHVAD-LLFELAPE-IAS 442
Query: 449 YLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASL 508
Y L++N+YAAA RW V VRQ+M K G RK S V+ NG +H GD ++ Q++
Sbjct: 443 YHVLLSNMYAAAGRWHCVEKVRQRMKKKGARKVAAYSSVEFNGEIHILYGGDKSHPQSAS 502
Query: 509 IYKTLGEITMQAMQEGYKPDISELFLGIEE 538
I L ++ Q GY P+ +F +E+
Sbjct: 503 ILAKLEDLLKQMKSMGYIPETDSVFHDVED 532
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 157/489 (32%), Positives = 262/489 (53%), Gaps = 55/489 (11%)
Query: 65 SGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFL 124
S YL + KVFE WN +I G+A++ E ++ + ++M + + PD +T S +
Sbjct: 143 SYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSV 202
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPA 184
L + A +G+++HG + +GY ++VFI ++L+++Y C R
Sbjct: 203 LPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMY--------AKCTR-------- 246
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
+D + ++F +P + +SW ++I+GC QNG + L F +M
Sbjct: 247 ------------------VDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQM 288
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYAS 304
A++ + V+ + + ACA + L LGK +H Y+ + G V + +AL+ MYA
Sbjct: 289 LIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGN----VFIASALVDMYAK 344
Query: 305 CGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGV 349
CG I A +F KM+ + VSWT+MI G+A G+A +A+ + F+ V
Sbjct: 345 CGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAV 404
Query: 350 LSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKP 409
L+ACSH G VDE ++F M Q++ I P +EHY + DL R G ++EA+ + +M ++P
Sbjct: 405 LTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEP 464
Query: 410 NDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAV 469
+V +LL CR+H N ELA +V++KL +DP+ Y+ L++N+Y+AA RW+D +
Sbjct: 465 TGSVWSTLLAACRVHKNIELAEKVSKKLFT-VDPQNIGAYV-LLSNIYSAAGRWKDARKL 522
Query: 470 RQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDI 529
R M G++K P SW++I +H FVAGD ++ I + L + Q +EGY D
Sbjct: 523 RIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDT 582
Query: 530 SELFLGIEE 538
+E+ +EE
Sbjct: 583 TEVLHDVEE 591
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 112/231 (48%), Gaps = 12/231 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH I NG+ +I + L+ Y + ++ +VF WN +I G ++
Sbjct: 217 EIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNG 276
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++ + ++QM+ + +P+ ++S ++ CA G+Q+HG ++ S + NVFI +
Sbjct: 277 MFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIAS 336
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP-- 214
L+++Y +CG + AR +FD M +VSW +++ GY G A +F M
Sbjct: 337 ALVDMY----AKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVE 392
Query: 215 --HRNVVSWTTMISGCAQNGKSRQALSLFNEMR---RARVGLDQVALVAAL 260
N V++ +++ C+ G +A FN M R GL+ A VA L
Sbjct: 393 GVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADL 443
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 162/489 (33%), Positives = 266/489 (54%), Gaps = 41/489 (8%)
Query: 79 ENPSTAI-WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL------------ 125
+ P+T + N ++R AR P + ++++ PD Y+++FL+
Sbjct: 74 QRPATLLAHNGLLRALARGPCPGLAFAAFREL---PLAPDHYSFTFLVRAATSLAAAASA 130
Query: 126 -SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPA 184
V + VH G+ ++ +++ +++Y G VG R F ++ +
Sbjct: 131 TPVPTDVAVNLLAGSVHAAAFQHGHATDPHVQSGAVSMYAAVGD---VGAVRAAFAEIVS 187
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
VV ++L GD+D A ++FD MP R+ V+W M++G + G+SR+AL LF+EM
Sbjct: 188 PDVVCVTAMLGALSAGGDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEM 247
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYAS 304
++A V + +V LV+ L+ACA++G L+ G W+HSYV S G V V+L AL+ MY+
Sbjct: 248 QKAGVAVSEVTLVSVLTACAQMGALERGMWVHSYV---CSRGMR-VSVTLGTALVDMYSK 303
Query: 305 CGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGV 349
CG + + VF M+ RN +WTS ++G A G +E L +TF+ V
Sbjct: 304 CGVVTMSMEVFETMRERNIYTWTSALSGLAMNGMGEECLELFKRMESAGMEPNGVTFVAV 363
Query: 350 LSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKP 409
L CS G V+EGR F+ M ++P +EHYGCMVDL+ RAG +D+A + +MP++P
Sbjct: 364 LRGCSVAGLVEEGRACFDSMKDKHKVEPWLEHYGCMVDLYGRAGRLDDAVDFINSMPVEP 423
Query: 410 NDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAV 469
++ V G+LL RIHNN +L KL EI+ + A ++ L++N+YA + W+ V+ V
Sbjct: 424 HEGVWGALLNASRIHNNVDLGKHAMHKLT-EIESKNDAAHV-LLSNIYAESHNWKGVSKV 481
Query: 470 RQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDI 529
R M GV+K PG S ++++G +H+F G ++ + I L E++ + +GY +
Sbjct: 482 RNMMKSKGVKKMPGCSAIEVDGKVHEFFVGSKSHPRYKDIQTMLAEMSHRLRLQGYAANT 541
Query: 530 SELFLGIEE 538
E+ IEE
Sbjct: 542 KEVLFDIEE 550
>gi|124360491|gb|ABN08501.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 575
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 155/456 (33%), Positives = 263/456 (57%), Gaps = 38/456 (8%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDK-ETEP 116
++ + G L A F+K S WN M+ G+A+ PE+++ L+ M+ +P
Sbjct: 134 MITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQP 193
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLAS-GYCSNVFIRTNLMNLYLMSGGECG-VGC 174
DE T++ ++S C+ G E + ++ G+ N F++T L++++ +CG +
Sbjct: 194 DETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMH----AKCGNLEA 249
Query: 175 ARLLFDDMPA---RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQN 231
A +F+ + RS V WN+++ Y + GD+ A +FD+MP R+ VSW +MI+G QN
Sbjct: 250 AHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQN 309
Query: 232 GKSRQALSLFNEMRRARVGL--DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREP 289
G+S +A+ LF EM + D+V +V+ SAC +G+L LG W S ++ V
Sbjct: 310 GESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILK----VNHIQ 365
Query: 290 VLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------ 343
+ +S+ N+LI+MY+ CG +++A +F++M R+ VS+ ++I+GFA+ G+ E++
Sbjct: 366 ISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKM 425
Query: 344 ---------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGL 394
+T++ +L+ACSH G +DEG++ FE + P ++HY CM+D+ RAG
Sbjct: 426 KEDGIEPDRITYIAILTACSHAGLLDEGQRLFESIK-----FPDVDHYACMIDMLGRAGR 480
Query: 395 MDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVA 454
++EA L+Q+MPM+P+ + GSLL IH EL A KL +++P + Y AL++
Sbjct: 481 LEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLF-KVEPHNSGNY-ALLS 538
Query: 455 NVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQIN 490
N+YA+A RW++ VR M K GV+K G SW++ N
Sbjct: 539 NIYASAGRWKEGDKVRDTMRKQGVKKTTGLSWLEHN 574
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 192/442 (43%), Gaps = 107/442 (24%)
Query: 103 VYLYKQMIDK-ETEPDEYTYSFLL-SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLM 160
V L+K M+ + +P+ YS ++ S + LF VL SGY + ++R ++
Sbjct: 16 VSLFKHMLQHCDIKPNASFYSVMMKSAGSESMLFL------AHVLKSGYDRDHYVRNGIL 69
Query: 161 NLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGY----------------------- 197
+Y G + AR LFD+MP R+V WN ++ GY
Sbjct: 70 GIYAKYGP---IEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISR 126
Query: 198 ------------VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM- 244
K+G++ A FD+MP R+VVSW M+SG AQ G + + LFN+M
Sbjct: 127 NVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDML 186
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYAS 304
V D+ +S+C+ +GD L + I +++ VG P + AL+ M+A
Sbjct: 187 SPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDK--VGFRPNYF-VKTALLDMHAK 243
Query: 305 CGEIEEAYGVFR----------------------------------KMQRRNTVSWTSMI 330
CG +E A+ +F KM +R+TVSW SMI
Sbjct: 244 CGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMI 303
Query: 331 TGFAKQGYAQEAL-----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNW 373
G+ + G + +A+ +T + V SAC H G + G + N
Sbjct: 304 AGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVN- 362
Query: 374 GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAV-LGSLLLGCRIHNNAELASQ 432
I+ I Y +++++SR G M +A + Q M + D V +L+ G H + + +
Sbjct: 363 HIQISISVYNSLINMYSRCGSMQDAVLIFQEMATR--DLVSYNTLISGFAEHGHGMESIE 420
Query: 433 VAQKLVAE-IDPEQAAGYLALV 453
+ K+ + I+P++ Y+A++
Sbjct: 421 LLSKMKEDGIEPDRIT-YIAIL 441
>gi|356530090|ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 566
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 155/466 (33%), Positives = 268/466 (57%), Gaps = 24/466 (5%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
IH++++ GF Y+ L+ Y + G+L A KVF++ WN ++ G+ + +
Sbjct: 99 IHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVFDEMPERDLVSWNSLVCGYGQCKR 158
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
+ + +++ M + D T ++ C G + + + + + +V++
Sbjct: 159 FREVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGEWGVADAMVDYIEENNVEIDVYLGNT 218
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
L+++Y G V AR +FD M R++VSWN+++ GY K G++ A ++FD M R+V
Sbjct: 219 LIDMY---GRRGLVHLARGVFDQMQWRNLVSWNAMIMGYGKAGNLVAARELFDAMSQRDV 275
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
+SWT MI+ +Q G+ +AL LF EM ++V D++ + + LSACA G L +G+ H Y
Sbjct: 276 ISWTNMITSYSQAGQFTEALRLFKEMMESKVKPDEITVASVLSACAHTGSLDVGEAAHDY 335
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+++ + V + + + NALI MY CG +E+A VF++M+++++VSWTS+I+G A G+
Sbjct: 336 IQK-YDVKAD---IYVGNALIDMYCKCGVVEKALEVFKEMRKKDSVSWTSIISGLAVNGF 391
Query: 339 AQEALL---------------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
A AL F+G+L AC+H G VD+G ++FE M + +G+KP ++HYG
Sbjct: 392 ADSALDYFSRMLREVVQPSHGAFVGILLACAHAGLVDKGLEYFESMEKVYGLKPEMKHYG 451
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
C+VDL SR+G + AF ++ MP+ P+ + LL ++H N LA ++A K + E+DP
Sbjct: 452 CVVDLLSRSGNLQRAFEFIKEMPVTPDVVIWRILLSASQVHGNIPLA-EIATKKLLELDP 510
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQI 489
+ Y+ L +N YA + RW+D +R+ M K V+KP G S +++
Sbjct: 511 SNSGNYV-LSSNTYAGSNRWEDAVKMRELMEKSNVQKPSGSSCIEM 555
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 202/448 (45%), Gaps = 89/448 (19%)
Query: 60 AFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEY 119
++ ++ ++ AH +F++ P+ WN MIRG + S+ P +++ +Y M + +
Sbjct: 19 SYALSPSTILKAHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMYNLMYRQGLLGNNL 78
Query: 120 TYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLL 178
TY FL CAR G +H RVL G+ S++++ L+N+Y G CG +G A+ +
Sbjct: 79 TYLFLFKACARVPDVSCGSTIHARVLKLGFESHLYVSNALINMY----GSCGHLGLAQKV 134
Query: 179 FDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQAL 238
FD+MP R +VSWNSL+ GY Q + R+ L
Sbjct: 135 FDEMPERDLVSWNSLVCGY-------------------------------GQCKRFREVL 163
Query: 239 SLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNAL 298
+F MR A V D V +V + AC +G+ + + Y+EEN + V L N L
Sbjct: 164 GVFEAMRVAGVKGDAVTMVKVVLACTSLGEWGVADAMVDYIEEN----NVEIDVYLGNTL 219
Query: 299 IHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG--------------------- 337
I MY G + A GVF +MQ RN VSW +MI G+ K G
Sbjct: 220 IDMYGRRGLVHLARGVFDQMQWRNLVSWNAMIMGYGKAGNLVAARELFDAMSQRDVISWT 279
Query: 338 -----YAQ-----EAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQN 372
Y+Q EAL +T VLSAC+H G +D G + + Q
Sbjct: 280 NMITSYSQAGQFTEALRLFKEMMESKVKPDEITVASVLSACAHTGSLDVGEAAHDYI-QK 338
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQ 432
+ +K I ++D++ + G++++A + + M K + S++ G ++ A+ A
Sbjct: 339 YDVKADIYVGNALIDMYCKCGVVEKALEVFKEM-RKKDSVSWTSIISGLAVNGFADSALD 397
Query: 433 VAQKLVAE-IDPEQAAGYLALVANVYAA 459
+++ E + P A L+A +A
Sbjct: 398 YFSRMLREVVQPSHGAFVGILLACAHAG 425
>gi|414880007|tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
Length = 648
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 178/533 (33%), Positives = 284/533 (53%), Gaps = 72/533 (13%)
Query: 20 TRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINA-------- 71
R+ LL +R+ L ++ + F+ L+KLLA V++ A
Sbjct: 74 VRRCPGLLALRSAHAHLTRLRLPRLTAAFA-----LSKLLASCVSAPAPAAAQAAASSYA 128
Query: 72 HKVFEKTENPSTAIWNQMIRG-HARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
+F++ +P+ +N +IR A P +VY + + P+ +T +F L CA
Sbjct: 129 RNLFDQIPDPTAFCYNSLIRALPAAGSAPALAVY-RRMLRAGSPRPNSFTLAFALKACAA 187
Query: 131 CGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGEC-GVGCARLLFDDMPARSVVS 189
EG Q+H + L G ++ +++T L+NLY +C V AR +FD M
Sbjct: 188 VPAPGEGRQLHAQALRQGLATSAYVQTGLLNLY----AKCEQVALARTVFDGMA------ 237
Query: 190 WNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARV 249
GD +N+V+W+ M+SG ++ G +AL LF EM+ V
Sbjct: 238 -----------GD-------------KNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGV 273
Query: 250 GLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIE 309
D+V +V+ +SACA+ G L LGKW+H+Y++ V + L+ ALI MYA CG IE
Sbjct: 274 EPDEVTMVSVISACAKAGALDLGKWVHAYIDRKGIT----VDLELSTALIDMYAKCGLIE 329
Query: 310 EAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACS 354
A GVF M ++T +W++MI GFA G ++AL +TF+GVLSAC+
Sbjct: 330 RARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACA 389
Query: 355 HGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL 414
H G V++GR+++ M QN GIKP +E+YGCMVDL R+GL+D+A+S V MP+ PN +
Sbjct: 390 HSGLVEDGRRYWSIM-QNLGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVIW 448
Query: 415 GSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMI 474
+LL+ C+ N ++A ++L+ E++P Y+ L++N+YA+ +W V+ +R+KM
Sbjct: 449 RTLLVACKSSNRIDIAESATKRLL-ELEPHNPENYV-LLSNLYASNSQWDRVSYLRRKMK 506
Query: 475 KMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
V G+S ++ING LH+FV D ++ + I L E+ + + G+KP
Sbjct: 507 GKNVTAIAGRSSIEINGHLHEFVVSDDSHPEIREIRLVLREMADRVRRAGHKP 559
>gi|23617093|dbj|BAC20776.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
Length = 681
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 154/418 (36%), Positives = 243/418 (58%), Gaps = 25/418 (5%)
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMP-ARSVVSWNSLLK 195
G VH + +G ++F+R L++ Y +SG VG R +FD++P R V++WN +L
Sbjct: 165 GSHVHALAVKAGAAGDLFVRNALVHFYGVSGD---VGAMRRVFDELPRVRDVLTWNEVLA 221
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVA 255
GYV+ G + A ++FDEMP R+ +SW+T++ G + + AL +F M V +Q A
Sbjct: 222 GYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVRPNQAA 281
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
+V ALSA A +G L+ GK++H+ V+ + PV +++ AL+ MYA CG + A VF
Sbjct: 282 VVTALSAAARLGLLEHGKFVHNVVQRSGM----PVCMNVGAALVDMYAKCGCVAVAREVF 337
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVD 360
M+RR+ +W +MI G A G ++A+ +TF+GVL+ CS G V
Sbjct: 338 DGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVLNGCSRSGLVA 397
Query: 361 EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
EGR++F+ + + + I+P +EHYGCMVDL RAGL+ EA L++ M + P+ + G++L
Sbjct: 398 EGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPVLWGTILSS 457
Query: 421 CRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRK 480
C+ H +L V KL+ E+DP +GY L++ +YA A +W +V VR+ M G K
Sbjct: 458 CKTHGLVDLGVSVGNKLI-ELDPTH-SGYYVLLSGIYAKANKWDEVREVRKLMSSRGTNK 515
Query: 481 PPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
G S ++ +G +H F+ GD+ +K + IY TL I + + GY PD+S + I E
Sbjct: 516 SAGWSLMEAHGKVHKFLVGDTYHKDSVQIYDTLDMINKRLTEAGYVPDVSSVLHDIGE 573
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 118/283 (41%), Gaps = 40/283 (14%)
Query: 57 KLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEP 116
++LA YV +G + A +VF++ W+ ++ G+ + E E ++ +++ M+++ P
Sbjct: 218 EVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVRP 277
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCA 175
++ LS AR GL G+ VH V SG + + L+++Y +CG V A
Sbjct: 278 NQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMY----AKCGCVAVA 333
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
R +FD M R V +WN+ MI G A +G R
Sbjct: 334 REVFDGMRRRDVFAWNA-------------------------------MICGLAAHGLGR 362
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
A+ LF + V V L+ C+ G + G+ + E + + EP +
Sbjct: 363 DAVELFERFISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRI--EPEMEHY- 419
Query: 296 NALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQG 337
++ + G + EA + M + V W ++++ G
Sbjct: 420 GCMVDLLGRAGLVPEAIELIEGMHIAPDPVLWGTILSSCKTHG 462
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 6/138 (4%)
Query: 2 LVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAF 61
+VE+ + N A AL+ LL+ +H+ + +G + A L+
Sbjct: 270 MVEQGVRPNQAAVVTALSAAARLGLLEHGKF------VHNVVQRSGMPVCMNVGAALVDM 323
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
Y G + A +VF+ WN MI G A +V L+++ I + P T+
Sbjct: 324 YAKCGCVAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTF 383
Query: 122 SFLLSVCARCGLFREGEQ 139
+L+ C+R GL EG +
Sbjct: 384 VGVLNGCSRSGLVAEGRR 401
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 155/474 (32%), Positives = 265/474 (55%), Gaps = 24/474 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH + GF ++ L+ Y G L A K+F+ + WN +I G+++
Sbjct: 137 KIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYN 196
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++ + L+ M + D T ++ C+ G + + + + + +V++
Sbjct: 197 KYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGN 256
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y G A+ +FD M R++VSWN+L+ G+ K G++ A K+FD MP R+
Sbjct: 257 TLIDMY---GRRSLAELAQGVFDRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRD 313
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
V+SWT+MI+G +Q + A+ LF EM A+V D+V + + LSACA +G L +G +H
Sbjct: 314 VISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHH 373
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y+ + + + N+LI MY CG +E+A VF +M+ +++VSWTS+I+G A G
Sbjct: 374 YIRRHGVQAD----IYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNG 429
Query: 338 YAQEALL---------------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+A AL TF+G+L AC+H G V++G ++FE M G+ P ++HY
Sbjct: 430 FANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHY 489
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
GC+VDL SR+G +D+A+ ++ MP+ P+ V LL C++H N LA ++A K + E+D
Sbjct: 490 GCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLSACKLHGNVVLA-EIATKRLLELD 548
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDF 496
P + Y+ L++N YA RW D +R+ M V+KP G S ++++G++ ++
Sbjct: 549 PCDSGNYV-LLSNTYAGVDRWDDAMKMRELMEDSDVQKPSGSSSIEVDGMVSNY 601
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 197/426 (46%), Gaps = 82/426 (19%)
Query: 32 TTKTLFQIHSQIIINGFSQKNYILAKLLAFY-VTSGYLINAHKVFEKTENPSTAIWNQMI 90
+T T ++H+ +I ++++ ++ Y ++S L AH VF + E P+ +WN MI
Sbjct: 29 STDTSKELHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTLVVWNHMI 88
Query: 91 RGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYC 150
RG ++S+ P +++++Y +M + + T FL CAR G ++H L G+
Sbjct: 89 RGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKIHVHALKLGFE 148
Query: 151 SNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIF 210
S +F+ L+++Y M G +G A+ +FD M R +VSWN+L+ GY
Sbjct: 149 SYLFVSNALIHMYAMCG---QLGFAQKMFDGMLDRDLVSWNTLICGY------------- 192
Query: 211 DEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLK 270
+Q K ++ L LF+ M A + D V +V + AC+ +GD +
Sbjct: 193 ------------------SQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWE 234
Query: 271 LGKWIHSYVEEN----------------------------FSVGREPVLVSLNNALIHMY 302
+ Y++EN F RE +VS NAL+ +
Sbjct: 235 FADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRERNIVSW-NALVMGH 293
Query: 303 ASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFL 347
A G + A +F M +R+ +SWTSMITG+++ +A+ +T
Sbjct: 294 AKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVA 353
Query: 348 GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM 407
VLSAC+H G +D G + ++ G++ I ++D++ + G++++A + M
Sbjct: 354 SVLSACAHLGKLDVGWAVHHYIRRH-GVQADIYVGNSLIDMYCKCGMVEKALEVFHR--M 410
Query: 408 KPNDAV 413
K D+V
Sbjct: 411 KDKDSV 416
>gi|125557337|gb|EAZ02873.1| hypothetical protein OsI_25005 [Oryza sativa Indica Group]
Length = 651
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 154/418 (36%), Positives = 243/418 (58%), Gaps = 25/418 (5%)
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMP-ARSVVSWNSLLK 195
G VH + +G ++F+R L++ Y +SG VG R +FD++P R V++WN +L
Sbjct: 165 GSHVHALAVKAGAAGDLFVRNALVHFYGVSGD---VGAMRRVFDELPRVRDVLTWNEVLA 221
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVA 255
GYV+ G + A ++FDEMP R+ +SW+T++ G + + AL +F M V +Q A
Sbjct: 222 GYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVRPNQAA 281
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
+V ALSA A +G L+ GK++H+ V+ + PV +++ AL+ MYA CG + A VF
Sbjct: 282 VVTALSAAARLGLLEHGKFVHNVVQRSGM----PVCMNVGAALVDMYAKCGCVAVAREVF 337
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVD 360
M+RR+ +W +MI G A G ++A+ +TF+GVL+ CS G V
Sbjct: 338 DGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVLNGCSRSGLVA 397
Query: 361 EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
EGR++F+ + + + I+P +EHYGCMVDL RAGL+ EA L++ M + P+ + G++L
Sbjct: 398 EGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPVLWGTILSS 457
Query: 421 CRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRK 480
C+ H +L V KL+ E+DP +GY L++ +YA A +W +V VR+ M G K
Sbjct: 458 CKTHGLVDLGVSVGNKLI-ELDPTH-SGYYVLLSGIYAKANKWDEVREVRKLMSSRGTNK 515
Query: 481 PPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
G S ++ +G +H F+ GD+ +K + IY TL I + + GY PD+S + I E
Sbjct: 516 SAGWSLMEAHGKVHKFLVGDTYHKDSVQIYDTLDMINKRLTEAGYVPDVSSVLHDIGE 573
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 118/283 (41%), Gaps = 40/283 (14%)
Query: 57 KLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEP 116
++LA YV +G + A +VF++ W+ ++ G+ + E E ++ +++ M+++ P
Sbjct: 218 EVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVRP 277
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCA 175
++ LS AR GL G+ VH V SG + + L+++Y +CG V A
Sbjct: 278 NQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMY----AKCGCVAVA 333
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
R +FD M R V +WN+ MI G A +G R
Sbjct: 334 REVFDGMRRRDVFAWNA-------------------------------MICGLAAHGLGR 362
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
A+ LF + V V L+ C+ G + G+ + E + + EP +
Sbjct: 363 DAVELFERFISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRI--EPEMEHY- 419
Query: 296 NALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQG 337
++ + G + EA + M + V W ++++ G
Sbjct: 420 GCMVDLLGRAGLVPEAIELIEGMHIAPDPVLWGTILSSCKTHG 462
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 6/138 (4%)
Query: 2 LVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAF 61
+VE+ + N A AL+ LL+ +H+ + +G + A L+
Sbjct: 270 MVEQGVRPNQAAVVTALSAAARLGLLEHGKF------VHNVVQRSGMPVCMNVGAALVDM 323
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
Y G + A +VF+ WN MI G A +V L+++ I + P T+
Sbjct: 324 YAKCGCVAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTF 383
Query: 122 SFLLSVCARCGLFREGEQ 139
+L+ C+R GL EG +
Sbjct: 384 VGVLNGCSRSGLVAEGRR 401
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 168/503 (33%), Positives = 257/503 (51%), Gaps = 55/503 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH I GF Y+ L+ Y G+L A ++ E E W MI G+ + E
Sbjct: 366 QIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHE 425
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++++ +K M PD + +S CA R+G+Q+H RV SGY ++V I
Sbjct: 426 FCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSI-- 483
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
WN+L+ Y + G A+ +F+ + H++
Sbjct: 484 --------------------------------WNALVNLYARCGRSKEAFSLFEAIEHKD 511
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
++W M+SG AQ+G +AL +F +M +A V + V+++SA A + D+K GK IH+
Sbjct: 512 KITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHA 571
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
V + V NALI +Y CG IE+A F +M RN VSW ++IT ++ G
Sbjct: 572 TVIKTGCTSETEV----ANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHG 627
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+ EAL +TF+GVL+ACSH G V+EG +F+ M+ GI PR +HY
Sbjct: 628 WGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHY 687
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
C+VD+ RAG +D A V+ MP+ N V +LL CR+H N E+ ++A K + E++
Sbjct: 688 ACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIG-ELAAKYLLELE 746
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P +A Y+ L++N YA +W VR+ M GVRK PG+SW+++ V+H F GD
Sbjct: 747 PHDSASYV-LLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRL 805
Query: 503 YKQASLIYKTLGEITMQAMQEGY 525
+ A IYK L ++ + + GY
Sbjct: 806 HPLAHQIYKYLADLDDRLAKIGY 828
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 171/385 (44%), Gaps = 54/385 (14%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
IH++ I G + L+ Y G + A +VFE+ W M+ G+AR+
Sbjct: 64 IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
E++V LY QM P Y S +LS C + LF +G VH +V G CS +
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
L+ LYL G + A +F +MP V++N+L+ + + G+ + A +IF+EM +
Sbjct: 184 LIALYLRFG---SLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEM---RL 237
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
WT D V + + L+ACA IGDL GK +HSY
Sbjct: 238 SGWTP----------------------------DCVTIASLLAACASIGDLNKGKQLHSY 269
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ G P + + +L+ +Y CG I EA +F+ R N V W M+ + +
Sbjct: 270 L---LKAGMSPDYI-IEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISD 325
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
++ T+ +L C++ G ++ G Q ++ G + + G
Sbjct: 326 LAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQ-IHLLSIKTGFESDMYVSG 384
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMK 408
++D++S+ G +D+A +++ + K
Sbjct: 385 VLIDMYSKYGWLDKARRILEVLEAK 409
>gi|115470713|ref|NP_001058955.1| Os07g0163900 [Oryza sativa Japonica Group]
gi|113610491|dbj|BAF20869.1| Os07g0163900 [Oryza sativa Japonica Group]
Length = 664
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 154/418 (36%), Positives = 243/418 (58%), Gaps = 25/418 (5%)
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMP-ARSVVSWNSLLK 195
G VH + +G ++F+R L++ Y +SG VG R +FD++P R V++WN +L
Sbjct: 165 GSHVHALAVKAGAAGDLFVRNALVHFYGVSGD---VGAMRRVFDELPRVRDVLTWNEVLA 221
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVA 255
GYV+ G + A ++FDEMP R+ +SW+T++ G + + AL +F M V +Q A
Sbjct: 222 GYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVRPNQAA 281
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
+V ALSA A +G L+ GK++H+ V+ + PV +++ AL+ MYA CG + A VF
Sbjct: 282 VVTALSAAARLGLLEHGKFVHNVVQRSGM----PVCMNVGAALVDMYAKCGCVAVAREVF 337
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVD 360
M+RR+ +W +MI G A G ++A+ +TF+GVL+ CS G V
Sbjct: 338 DGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVLNGCSRSGLVA 397
Query: 361 EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
EGR++F+ + + + I+P +EHYGCMVDL RAGL+ EA L++ M + P+ + G++L
Sbjct: 398 EGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPVLWGTILSS 457
Query: 421 CRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRK 480
C+ H +L V KL+ E+DP +GY L++ +YA A +W +V VR+ M G K
Sbjct: 458 CKTHGLVDLGVSVGNKLI-ELDPTH-SGYYVLLSGIYAKANKWDEVREVRKLMSSRGTNK 515
Query: 481 PPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
G S ++ +G +H F+ GD+ +K + IY TL I + + GY PD+S + I E
Sbjct: 516 SAGWSLMEAHGKVHKFLVGDTYHKDSVQIYDTLDMINKRLTEAGYVPDVSSVLHDIGE 573
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 118/283 (41%), Gaps = 40/283 (14%)
Query: 57 KLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEP 116
++LA YV +G + A +VF++ W+ ++ G+ + E E ++ +++ M+++ P
Sbjct: 218 EVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVRP 277
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCA 175
++ LS AR GL G+ VH V SG + + L+++Y +CG V A
Sbjct: 278 NQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMY----AKCGCVAVA 333
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
R +FD M R V +WN+ MI G A +G R
Sbjct: 334 REVFDGMRRRDVFAWNA-------------------------------MICGLAAHGLGR 362
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
A+ LF + V V L+ C+ G + G+ + E + + EP +
Sbjct: 363 DAVELFERFISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRI--EPEMEHY- 419
Query: 296 NALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQG 337
++ + G + EA + M + V W ++++ G
Sbjct: 420 GCMVDLLGRAGLVPEAIELIEGMHIAPDPVLWGTILSSCKTHG 462
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 6/138 (4%)
Query: 2 LVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAF 61
+VE+ + N A AL+ LL+ +H+ + +G + A L+
Sbjct: 270 MVEQGVRPNQAAVVTALSAAARLGLLEHGKF------VHNVVQRSGMPVCMNVGAALVDM 323
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
Y G + A +VF+ WN MI G A +V L+++ I + P T+
Sbjct: 324 YAKCGCVAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTF 383
Query: 122 SFLLSVCARCGLFREGEQ 139
+L+ C+R GL EG +
Sbjct: 384 VGVLNGCSRSGLVAEGRR 401
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 167/536 (31%), Positives = 281/536 (52%), Gaps = 58/536 (10%)
Query: 19 TTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKT 78
T R SLL RN + + Q+H+QI NG + + KLL YV G L +A ++F+
Sbjct: 53 TKRFRSSLLSCRNLFQ-VRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGM 111
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE 138
W+ ++ G+A+ +++++++ D+Y+ ++ C + G
Sbjct: 112 SKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGR 171
Query: 139 QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYV 198
+H L G F+ CA L+ DM AR V
Sbjct: 172 LIHCITLKCGLDYGHFV------------------CATLV--DMYARCKV---------- 201
Query: 199 KRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVA 258
++ A +IF +M R++ +WT MI A++G ++L F+ MR + D+VALV
Sbjct: 202 ----VEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVT 257
Query: 259 ALSACAEIGDLKLGKWIHSYVE-ENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
+ ACA++G + K IH+Y+ +S+ V L A+I MYA CG +E A +F +
Sbjct: 258 VVYACAKLGAMNKAKAIHAYINGTGYSLD-----VILGTAMIDMYAKCGSVESARWIFDR 312
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEG 362
MQ RN ++W++MI + G ++AL +TF+ +L ACSH G ++EG
Sbjct: 313 MQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEG 372
Query: 363 RQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCR 422
++FF M +G+ P ++HY CMVDL RAG +DEA +++ MP++ ++ + G+LL CR
Sbjct: 373 QRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACR 432
Query: 423 IHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPP 482
IH + +LA +VA+ L+ Q G+ L++N+YA A +W+D+A R M K G+RK P
Sbjct: 433 IHRHLDLAERVARSLLKL--QSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLRKIP 490
Query: 483 GQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
G++W+++ L+ F GD T+ +++ IYK L + + GY PD +++ ++E
Sbjct: 491 GRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVAGYHPDTNDVLYDVDE 546
>gi|357507475|ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360495|gb|ABN08505.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499041|gb|AES80244.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 646
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 155/455 (34%), Positives = 262/455 (57%), Gaps = 37/455 (8%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDK-ETEP 116
++ + G L A F+K S WN M+ G+A+ PE+++ L+ M+ +P
Sbjct: 206 MITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQP 265
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLAS-GYCSNVFIRTNLMNLYLMSGGECG-VGC 174
DE T+ ++S C+ G E + ++ + G+ N F++T L++++ +CG +
Sbjct: 266 DETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMH----AKCGNLEA 321
Query: 175 ARLLFDDMPA---RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQN 231
A +F+ + RS V WN+++ Y + GD+ A +FD+MP R+ VSW +MI+G QN
Sbjct: 322 AHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQN 381
Query: 232 GKSRQALSLFNEMRRARVGL-DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPV 290
G+S +A+ LF EM + D+V +V+ SAC +G+L LG W S ++EN +
Sbjct: 382 GESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKEN----HIQI 437
Query: 291 LVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------- 343
+S+ N+LI MY+ CG +++A +F++M R+ VS+ ++I+GFA+ G+ E++
Sbjct: 438 SISVYNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLLKMK 497
Query: 344 --------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLM 395
+T++ +L+ACSH G + EG++ FE + P ++HY CM+D+ RAG +
Sbjct: 498 EDGIEPDRITYIAILTACSHAGLLGEGQRLFESIK-----FPDVDHYACMIDMLGRAGRL 552
Query: 396 DEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVAN 455
+EA L+Q+MPM+P+ + GSLL IH EL A KL +++P + Y+ L++N
Sbjct: 553 EEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLF-KVEPHNSGNYV-LLSN 610
Query: 456 VYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQIN 490
+YA+A RW+D VR M K GV+K G SW++ N
Sbjct: 611 IYASAGRWKDGDKVRDTMRKQGVKKTTGLSWLEHN 645
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 130/517 (25%), Positives = 226/517 (43%), Gaps = 120/517 (23%)
Query: 36 LFQIHSQIIINGFSQKNYILAKLLA----FYVTSGYLINAHKVFEKTENPSTAIWNQMIR 91
L Q+H+Q++ + +N+ + LL S Y + +F +P ++ M++
Sbjct: 19 LRQLHAQLVHHSLHHQNHWVVLLLTQCTRLLAPSSYTCH---IFHAATHPDVRVFTFMLK 75
Query: 92 GHA----RSETPEKSVYLYKQMIDK-ETEPDEYTYSFLL-SVCARCGLFREGEQVHGRVL 145
++ R++ P V L+K M+ +P+ YS ++ S + LF VL
Sbjct: 76 YYSQIGVRAQVP---VSLFKHMLRHCNIKPNTSFYSVMMKSAGSESMLFL------AHVL 126
Query: 146 ASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGY-------- 197
SGY + ++R ++ +Y G + AR LFD+MP R+V WN ++ GY
Sbjct: 127 KSGYDRDHYVRNGILGIYAKYGP---IEFARKLFDEMPDRTVADWNVMISGYWKCGNEEE 183
Query: 198 ---------------------------VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQ 230
K+G++ A FD+MP R+VVSW M+SG AQ
Sbjct: 184 ASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQ 243
Query: 231 NGKSRQALSLFNEM-RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREP 289
G + + LFN+M V D+ V +S+C+ +GD L + I +++ +VG P
Sbjct: 244 GGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDD--TVGFRP 301
Query: 290 VLVSLNNALIHMYASCGEIEEAYGVFR--------------------------------- 316
+ AL+ M+A CG +E A+ +F
Sbjct: 302 NYF-VKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLF 360
Query: 317 -KMQRRNTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFV 359
KM +R+TVSW SMI G+ + G + +A+ +T + V SAC H G +
Sbjct: 361 DKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGEL 420
Query: 360 DEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAV-LGSLL 418
G + +N I+ I Y ++ ++SR G M +A + Q M + D V +L+
Sbjct: 421 GLGNWAVSILKEN-HIQISISVYNSLISMYSRCGSMQDAVLIFQEMATR--DLVSYNTLI 477
Query: 419 LGCRIHNNAELASQVAQKLVAE-IDPEQAAGYLALVA 454
G H + + ++ K+ + I+P++ Y+A++
Sbjct: 478 SGFAEHGHGMESIELLLKMKEDGIEPDRIT-YIAILT 513
>gi|297737809|emb|CBI27010.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 167/484 (34%), Positives = 264/484 (54%), Gaps = 39/484 (8%)
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
A ++F++ +P+ A+WN M RG+A+SE+ Y+++ + E + ++ +++
Sbjct: 4 ARQLFDQIPDPNIALWNSMFRGYAQSES-------YREIFCEMFERNVVAWTSMIN---- 52
Query: 131 CGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSW 190
G + V R L + N+M + GG+ + AR LF +MP R V+ W
Sbjct: 53 -GYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGD--MVEARKLFHEMPNRDVMFW 109
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM-RRARV 249
N++LKGY G+++ +F+EMP RN+ SW +I G A NG + L F M + V
Sbjct: 110 NTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDV 169
Query: 250 GLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIE 309
+ LV LSACA +G L LGKW+H Y E + G V + NAL+ MYA CG IE
Sbjct: 170 PPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGN----VYVGNALMDMYAKCGIIE 225
Query: 310 EAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACS 354
A VFR M ++ +SW ++I G A +AL +TF+G+L AC+
Sbjct: 226 NAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACT 285
Query: 355 HGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL 414
H G V++G +F+ M ++ I P+IEHYGCMVD+ +RAG +++A + V+ MP++ + +
Sbjct: 286 HMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIW 345
Query: 415 GSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMI 474
LL CRI+ N ELA Q+L+ E++P+ A Y+ L +N+Y A RW+DVA ++ M
Sbjct: 346 AGLLGACRIYKNVELAELALQRLI-ELEPKNPANYVML-SNIYGDAGRWEDVARLKVAMR 403
Query: 475 KMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFL 534
G +K PG S +++N + +F + D + Q IY L + GY I+ +FL
Sbjct: 404 DTGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLVKVLRSFGY---ITCIFL 460
Query: 535 GIEE 538
I +
Sbjct: 461 FINQ 464
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 124/303 (40%), Gaps = 72/303 (23%)
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS-----------ETPEKSVYLYKQMI 110
Y+ G ++ A K+F + N WN +++G+A + E PE++++ + +I
Sbjct: 85 YIEGGDMVEARKLFHEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALI 144
Query: 111 ---------------------DKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGY 149
+ + P++ T +LS CAR G G+ VH +SG
Sbjct: 145 GGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGL 204
Query: 150 CSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWK 208
NV++ LM++Y +CG + A +F M + ++SWN
Sbjct: 205 KGNVYVGNALMDMY----AKCGIIENAISVFRGMDTKDLISWN----------------- 243
Query: 209 IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGD 268
T+I G A + + AL+LF +M+ A D + + L AC +G
Sbjct: 244 --------------TLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGL 289
Query: 269 LKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWT 327
++ G + +++ + + + ++ M A G +E+A RKM + V W
Sbjct: 290 VEDGFAYFQSMADDYLIMPQ---IEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWA 346
Query: 328 SMI 330
++
Sbjct: 347 GLL 349
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 53/137 (38%), Gaps = 6/137 (4%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
ML E +P N AT L+ L + +H +G Y+ L+
Sbjct: 163 MLSESDVPPNDATLVTVLSACARLGALDLGK------WVHVYAESSGLKGNVYVGNALMD 216
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y G + NA VF + WN +I G A ++ L+ QM + +PD T
Sbjct: 217 MYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGIT 276
Query: 121 YSFLLSVCARCGLFREG 137
+ +L C GL +G
Sbjct: 277 FIGILCACTHMGLVEDG 293
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 163/502 (32%), Positives = 268/502 (53%), Gaps = 27/502 (5%)
Query: 54 ILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKE 113
+ A ++ V G L A ++ + + W +I G++R+ P +VY + M+
Sbjct: 171 VWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDG 230
Query: 114 TEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-V 172
EPDE LS C++ G +H V + L+++Y +CG +
Sbjct: 231 VEPDEVAVIGALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMY----AKCGDI 286
Query: 173 GCARLLFDDM-PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQN 231
A+ +FD + + WN ++ GY K G +D A +FD+M R+V+++ +MI+G +
Sbjct: 287 AQAQAVFDAVGRGQKPEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHS 346
Query: 232 GKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL 291
G+ R AL LF ++RR + D +V+ L+ACA +G L G+ +H+ +E+ V + L
Sbjct: 347 GRLRDALQLFMQLRRHGMRADNFTVVSLLTACASLGALPQGRALHASIEQRI-VEEDVYL 405
Query: 292 VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------- 343
V+ AL+ MY CG ++EA VF +M R+ +W++MI G A G +AL
Sbjct: 406 VT---ALVDMYMKCGRVDEATAVFHRMGERDVHTWSAMIAGLAFNGMGMDALESFCQMKR 462
Query: 344 -------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMD 396
+T++ VL+ACSH ++EGRQ F M + P+IEHYGCM+DL +R+GL+D
Sbjct: 463 DGFQPTSVTYIAVLTACSHSSLLNEGRQHFNEMRSLHKLHPQIEHYGCMIDLLARSGLLD 522
Query: 397 EAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANV 456
EA LVQ MPM+PN + S+L CR+H N +LA A+ L+ ++ PE+ A Y+ L N+
Sbjct: 523 EAMHLVQTMPMQPNAVIWASILSACRVHKNIDLARHAAEHLL-KLAPEEDAVYVQLY-NI 580
Query: 457 YAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEI 516
Y +++W + +R M + GV+K G S + + G +H FV D ++ I + EI
Sbjct: 581 YIDSRQWVEAKRIRMLMEEQGVKKTAGYSSITVAGQVHKFVVNDQSHPWTLEIITMMEEI 640
Query: 517 TMQAMQEGYKPDISELFLGIEE 538
+ GY P S + + ++E
Sbjct: 641 ARRLKSAGYSPATSRIAVDVDE 662
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 209/452 (46%), Gaps = 76/452 (16%)
Query: 7 IPANPATSSKALTTRQIFSLLQIRNTT-KTLFQIHSQIIINGFSQKNYILAKLLAFYVTS 65
+PA+P + +++ RQ L I T+ + + ++ ++N + N + A YV S
Sbjct: 1 MPASPWPTPRSV--RQASQLHAILTTSGRIAHRPSAEHLLNSLT--NCLSAPRHLRYVLS 56
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHAR-SETPEKSVYLYKQMIDKETEPDEYTYSFL 124
+F++ +P+T + + +R + S + V + ++M +T+ F+
Sbjct: 57 --------LFDRLPHPTTFLHDTALRACLQASAGADHPVLILRRMRRGGVRMSAFTFHFV 108
Query: 125 LSVCAR---CGLFREGEQVHGRVLASGYCSNVFIRTN-LMNLYLMSGGECGVGCARLLFD 180
CA GL R +H L + S I N L+++Y G AR FD
Sbjct: 109 FRCCAAGAGAGLCR---MLHAACLRTMLPSAARIVANPLIHMYASLGL---TDDARRAFD 162
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSL 240
++P + V W +++ G V+ G +D A ++ + P RNVVSWT++I+G ++ G+ A+
Sbjct: 163 EVPVKDAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYC 222
Query: 241 FNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIH 300
FN M V D+VA++ ALSAC+++ +L+ G+ +H V + + ++V+ LI
Sbjct: 223 FNCMLSDGVEPDEVAVIGALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVT----LID 278
Query: 301 MYASCGEIEEAYGVFRKMQR--------------------------------RNTVSWTS 328
MYA CG+I +A VF + R R+ +++ S
Sbjct: 279 MYAKCGDIAQAQAVFDAVGRGQKPEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFNS 338
Query: 329 MITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNW 373
MITG+ G ++AL T + +L+AC+ G + +GR + Q
Sbjct: 339 MITGYIHSGRLRDALQLFMQLRRHGMRADNFTVVSLLTACASLGALPQGRALHASIEQRI 398
Query: 374 GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
++ + +VD++ + G +DEA ++ M
Sbjct: 399 -VEEDVYLVTALVDMYMKCGRVDEATAVFHRM 429
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 128/317 (40%), Gaps = 40/317 (12%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEK 77
+T + + +L+ + + Q + G QK ++ Y G++ A +F++
Sbjct: 268 MTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNVIIDGYCKLGHVDIARSLFDQ 327
Query: 78 TENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+N MI G+ S ++ L+ Q+ D +T LL+ CA G +G
Sbjct: 328 MGARDVITFNSMITGYIHSGRLRDALQLFMQLRRHGMRADNFTVVSLLTACASLGALPQG 387
Query: 138 EQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKG 196
+H + +V++ T L+++Y+ +CG V A +F M R V +W++
Sbjct: 388 RALHASIEQRIVEEDVYLVTALVDMYM----KCGRVDEATAVFHRMGERDVHTWSA---- 439
Query: 197 YVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVAL 256
MI+G A NG AL F +M+R V
Sbjct: 440 ---------------------------MIAGLAFNGMGMDALESFCQMKRDGFQPTSVTY 472
Query: 257 VAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFR 316
+A L+AC+ L G+ + E S+ + + +I + A G ++EA + +
Sbjct: 473 IAVLTACSHSSLLNEGR---QHFNEMRSLHKLHPQIEHYGCMIDLLARSGLLDEAMHLVQ 529
Query: 317 KM-QRRNTVSWTSMITG 332
M + N V W S+++
Sbjct: 530 TMPMQPNAVIWASILSA 546
>gi|357507465|ref|XP_003624021.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499036|gb|AES80239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 632
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 155/456 (33%), Positives = 263/456 (57%), Gaps = 38/456 (8%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDK-ETEP 116
++ + G L A F+K S WN M+ G+A+ PE+++ L+ M+ +P
Sbjct: 191 MITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQP 250
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLAS-GYCSNVFIRTNLMNLYLMSGGECG-VGC 174
DE T++ ++S C+ G E + ++ G+ N F++T L++++ +CG +
Sbjct: 251 DETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMH----AKCGNLEA 306
Query: 175 ARLLFDDMPA---RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQN 231
A +F+ + RS V WN+++ Y + GD+ A +FD+MP R+ VSW +MI+G QN
Sbjct: 307 AHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQN 366
Query: 232 GKSRQALSLFNEMRRARVGL--DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREP 289
G+S +A+ LF EM + D+V +V+ SAC +G+L LG W S ++ V
Sbjct: 367 GESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILK----VNHIQ 422
Query: 290 VLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------ 343
+ +S+ N+LI+MY+ CG +++A +F++M R+ VS+ ++I+GFA+ G+ E++
Sbjct: 423 ISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKM 482
Query: 344 ---------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGL 394
+T++ +L+ACSH G +DEG++ FE + P ++HY CM+D+ RAG
Sbjct: 483 KEDGIEPDRITYIAILTACSHAGLLDEGQRLFESIK-----FPDVDHYACMIDMLGRAGR 537
Query: 395 MDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVA 454
++EA L+Q+MPM+P+ + GSLL IH EL A KL +++P + Y AL++
Sbjct: 538 LEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLF-KVEPHNSGNY-ALLS 595
Query: 455 NVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQIN 490
N+YA+A RW++ VR M K GV+K G SW++ N
Sbjct: 596 NIYASAGRWKEGDKVRDTMRKQGVKKTTGLSWLEHN 631
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 126/516 (24%), Positives = 222/516 (43%), Gaps = 115/516 (22%)
Query: 35 TLFQIHSQIIINGFSQKNYILAKLLA----FYVTSGYLINAHKVFEKTENPSTAIWNQMI 90
+L Q+ ++ + +N+ + LL F S Y + +F +P ++ M+
Sbjct: 3 SLLQLCIVLVHHSLHHQNHWVVLLLTQCTRFLAPSSYTCH---IFHAATHPDVRVFTFML 59
Query: 91 RGHARSETPEKS-VYLYKQMIDK-ETEPDEYTYSFLL-SVCARCGLFREGEQVHGRVLAS 147
+ +++ + V L+K M+ + +P+ YS ++ S + LF VL S
Sbjct: 60 KYYSQIGVHSQVFVSLFKHMLQHCDIKPNASFYSVMMKSAGSESMLFL------AHVLKS 113
Query: 148 GYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGY---------- 197
GY + ++R ++ +Y G + AR LFD+MP R+V WN ++ GY
Sbjct: 114 GYDRDHYVRNGILGIYAKYGP---IEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEAS 170
Query: 198 -------------------------VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNG 232
K+G++ A FD+MP R+VVSW M+SG AQ G
Sbjct: 171 TLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGG 230
Query: 233 KSRQALSLFNEM-RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL 291
+ + LFN+M V D+ +S+C+ +GD L + I +++ VG P
Sbjct: 231 APEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDK--VGFRPNY 288
Query: 292 VSLNNALIHMYASCGEIEEAYGVFR----------------------------------K 317
+ AL+ M+A CG +E A+ +F K
Sbjct: 289 F-VKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDK 347
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEAL-----------------LTFLGVLSACSHGGFVD 360
M +R+TVSW SMI G+ + G + +A+ +T + V SAC H G +
Sbjct: 348 MPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELG 407
Query: 361 EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAV-LGSLLL 419
G + N I+ I Y +++++SR G M +A + Q M + D V +L+
Sbjct: 408 LGNWAVSILKVN-HIQISISVYNSLINMYSRCGSMQDAVLIFQEMATR--DLVSYNTLIS 464
Query: 420 GCRIHNNAELASQVAQKLVAE-IDPEQAAGYLALVA 454
G H + + ++ K+ + I+P++ Y+A++
Sbjct: 465 GFAEHGHGMESIELLSKMKEDGIEPDRIT-YIAILT 499
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 171/526 (32%), Positives = 278/526 (52%), Gaps = 65/526 (12%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q H Q ++ GF ++ + L+ Y G L NA +F++ + W +I G+ +++
Sbjct: 103 QAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQND 162
Query: 98 TPEKSVYLYKQMIDKETEP---------DEYTYSFLLSVCARCGLFREGEQVHGRVLASG 148
+++ ++K+ + +++E D +LS C+R E VHG + G
Sbjct: 163 DAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVG 222
Query: 149 YCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWK 208
L + G E N+LL Y K G++ + K
Sbjct: 223 -------------LDKVMGVE---------------------NTLLDAYAKCGEVSLSRK 248
Query: 209 IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG-LDQVALVAALSACAEIG 267
+FD+M ++VVSW +MI+ AQNG S A +F+ M +A G ++V L L ACA G
Sbjct: 249 VFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEG 308
Query: 268 DLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
L++G +H V + V V + ++I MY CG+ E A F M+ +N SWT
Sbjct: 309 ALRVGMCLHDQVIKMGYVNN----VIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWT 364
Query: 328 SMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQN 372
+MI G+ G+A+EAL +TF+ VL+ACSH GF++EG ++F M+
Sbjct: 365 AMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHE 424
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQ 432
+ ++P +EHYGCMVDL RAG + EA++L+++M ++ + + GSLL CRIH + ELA
Sbjct: 425 YNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEI 484
Query: 433 VAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGV 492
A++L ++DP GY L+AN+YA A RW+DV +R + G+ KPPG S V++ G
Sbjct: 485 SARELF-KLDPSN-CGYYVLLANIYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGR 542
Query: 493 LHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+H F+ GD + Q IYK L E++++ + GY P+++ + ++E
Sbjct: 543 VHVFLVGDKEHPQHEKIYKYLEELSVKLQEAGYVPNMASVLHDVDE 588
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 121/277 (43%), Gaps = 75/277 (27%)
Query: 208 KIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIG 267
K FD +V SW ++I+ A+ G S ++L F+ MR+ + ++ A+ +C+ +
Sbjct: 40 KYFDRT---DVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96
Query: 268 DLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
DL GK H ++ G E L +++ALI MY+ CG++ A +F ++ RRN V+WT
Sbjct: 97 DLNSGKQAH---QQALVFGFESDLF-VSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWT 152
Query: 328 SMITGFAKQGYAQEALLTF------------------------LGVLSACS--------- 354
S+ITG+ + A EAL+ F + VLSACS
Sbjct: 153 SLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSE 212
Query: 355 --HG------------------------GFVDEGRQFFECMNQNWGIKPRIEHYGCMVDL 388
HG G V R+ F+ M + + + M+ +
Sbjct: 213 GVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEK-----DVVSWNSMIAV 267
Query: 389 FSRAGLMDEAFSLVQNMPM----KPNDAVLGSLLLGC 421
+++ GL +AF + M K N+ L +LLL C
Sbjct: 268 YAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLAC 304
>gi|255543449|ref|XP_002512787.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547798|gb|EEF49290.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 480
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 159/436 (36%), Positives = 246/436 (56%), Gaps = 26/436 (5%)
Query: 10 NPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLI 69
N + + +++ +LLQ + + + ++II N S ++ KLL + +
Sbjct: 22 NHSNNKPKFGSQEALNLLQKGSNFTHVKLVQAKIIRNNLSDDQLLVRKLLRLCFSYQKVD 81
Query: 70 NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
A +F++ +NP T WN MIR + + ++++ LY MI + PD++T+ F++ C
Sbjct: 82 YATLIFDQIQNPHTFTWNFMIRAYNYNGNSQQALLLYNLMICEGFSPDKFTFPFVIKACL 141
Query: 130 RCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVV 188
+G++VHG + +G+ + F+ LM+LY +CG + AR LFD M RSVV
Sbjct: 142 DHSALDKGKEVHGFAIKTGFWKDTFLSNTLMDLYF----KCGDLDYARKLFDKMAVRSVV 197
Query: 189 SWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR 248
SW + + G V G++D A FDEMP RNVVSWT MI+G +N + ++A LF M+ A
Sbjct: 198 SWTTFVAGLVACGELDTARAAFDEMPMRNVVSWTAMINGYVKNQRPQEAFELFQRMQLAN 257
Query: 249 VGLDQVALVAALSACAEIGDLKLGKWIHSYVEEN-FSVGREPVLVSLNNALIHMYASCGE 307
V + LV L AC E+G L+LG+ IH Y EN F VG V L ALI MY+ CG
Sbjct: 258 VRPNGFTLVGLLRACTELGSLELGRRIHEYALENGFKVG-----VFLGTALIDMYSKCGS 312
Query: 308 IEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSA 352
IE+A VF +MQ+++ +W SMIT G+ +EAL +TF+GVL A
Sbjct: 313 IEDAKKVFEEMQKKSLATWNSMITSLGVHGFGKEALALFAQMEEANVRPDAITFVGVLFA 372
Query: 353 CSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDA 412
C + V+ G ++F+ M +++GI P +EHY CM++L++RA +++E LV +MPMK N
Sbjct: 373 CVNTNNVEAGYRYFKYMTEHYGITPMLEHYTCMIELYTRAAMLNEVSELVNSMPMKLNSN 432
Query: 413 VLGSLLLGCRIHNNAE 428
+L+ I +NAE
Sbjct: 433 PAAALVWPSIIDSNAE 448
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 170/511 (33%), Positives = 261/511 (51%), Gaps = 55/511 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH +I +G + L+ Y+ G L +A VF ++ W MI G A
Sbjct: 553 QIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQG 612
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
K++ L+ QM ++ P + T+S +L VC EG++V +L SGY +
Sbjct: 613 EDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDT---- 668
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
GVG N+L+ Y K G + A ++FD+MP R+
Sbjct: 669 -------------GVG-----------------NALISAYSKSGSMTDAREVFDKMPSRD 698
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+VSW +I+G AQNG + A+ +M+ V ++ + V+ L+AC+ L+ GK +H+
Sbjct: 699 IVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHA 758
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
+ + G V + ALI MYA CG EA VF + +N V+W +MI +A+ G
Sbjct: 759 EIVKRKLQGD----VRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHG 814
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
A +AL TF +LSAC+H G V EG Q F M +G+ P IEHY
Sbjct: 815 LASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHY 874
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
GC+V L RA EA +L+ MP P+ AV +LL CRIH N LA A + +++
Sbjct: 875 GCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNAL-KLN 933
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
A Y+ L++NVYAAA RW DVA +R+ M G+RK PG+SW++++ ++H+F+A D +
Sbjct: 934 ARNPAVYI-LLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRS 992
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELF 533
+ + + IY L ++++ + GY PD +
Sbjct: 993 HPETAEIYAELKRLSVEMEEAGYFPDTQHVL 1023
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 191/411 (46%), Gaps = 59/411 (14%)
Query: 17 ALTTRQIFSLLQIRNTTKTLFQ---IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHK 73
AL S+L +T+K L IHS I +G S I L++ Y G L A +
Sbjct: 327 ALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARE 386
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGL 133
+F WN +I G+AR E +++ LYKQM + +P T+ LLS CA
Sbjct: 387 LFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSA 446
Query: 134 FREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSL 193
+ +G+ +H +L SG SN + LMN+Y G + A+ +F+ AR V+SWNS+
Sbjct: 447 YADGKMIHEDILRSGIKSNGHLANALMNMYRRCG---SLMEAQNVFEGTQARDVISWNSM 503
Query: 194 LKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQ 253
+ G+ + G + A+K+F EM + + D
Sbjct: 504 IAGHAQHGSYETAYKLFQEMQNEELEP-------------------------------DN 532
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
+ + LS C L+LGK IH + E+ G + + V+L NALI+MY CG +++A
Sbjct: 533 ITFASVLSGCKNPEALELGKQIHGRITES---GLQ-LDVNLGNALINMYIRCGSLQDARN 588
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGF 358
VF +Q R+ +SWT+MI G A QG +A+ TF +L C+
Sbjct: 589 VFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSAC 648
Query: 359 VDEGRQFFE-CMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
+DEG++ +N + + + + ++ +S++G M +A + MP +
Sbjct: 649 LDEGKKVIAYILNSGYELDTGVGN--ALISAYSKSGSMTDAREVFDKMPSR 697
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 181/411 (44%), Gaps = 62/411 (15%)
Query: 19 TTRQIFSLLQIRNTTKTLF----QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKV 74
T R + L T K L +IH+Q++ ++ L+ YV +++AH+V
Sbjct: 25 TERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQV 84
Query: 75 FEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLF 134
F++ WN +I +A+ +K+ L+++M + P++ TY +L+ C
Sbjct: 85 FKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAEL 144
Query: 135 REGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSL 193
G+++H +++ +GY + ++ +L+++Y G+CG + AR +F + R VVS+N++
Sbjct: 145 ENGKKIHSQIIKAGYQRDPRVQNSLLSMY----GKCGDLPRARQVFAGISPRDVVSYNTM 200
Query: 194 LKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQ 253
L Y AQ ++ L LF +M + D+
Sbjct: 201 LGLY-------------------------------AQKAYVKECLGLFGQMSSEGISPDK 229
Query: 254 VALVAALSACAEIGDLKLGKWIHSY-VEENFSVGREPVLVSLNNALIHMYASCGEIEEAY 312
V + L A L GK IH VEE + + + AL+ M CG+++ A
Sbjct: 230 VTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSD-----IRVGTALVTMCVRCGDVDSAK 284
Query: 313 GVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGG 357
F+ R+ V + ++I A+ G+ EA T+L +L+ACS
Sbjct: 285 QAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSK 344
Query: 358 FVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
++ G+ ++++ G ++ ++ +++R G + +A L MP +
Sbjct: 345 ALEAGKLIHSHISED-GHSSDVQIGNALISMYARCGDLPKARELFYTMPKR 394
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 144/302 (47%), Gaps = 54/302 (17%)
Query: 112 KETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG 171
+ TE + TY LL C R L E +++H +++ + ++F+ L+N+Y
Sbjct: 21 RPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMY-------- 72
Query: 172 VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQN 231
V C RSV+ A ++F EMP R+V+SW ++IS AQ
Sbjct: 73 VKC----------RSVLD----------------AHQVFKEMPRRDVISWNSLISCYAQQ 106
Query: 232 GKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL 291
G ++A LF EM+ A +++ ++ L+AC +L+ GK IHS + + R+P
Sbjct: 107 GFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKA-GYQRDP-- 163
Query: 292 VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------- 343
+ N+L+ MY CG++ A VF + R+ VS+ +M+ +A++ Y +E L
Sbjct: 164 -RVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSS 222
Query: 344 -------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMD 396
+T++ +L A + +DEG++ + + G+ I +V + R G +D
Sbjct: 223 EGISPDKVTYINLLDAFTTPSMLDEGKRIHK-LTVEEGLNSDIRVGTALVTMCVRCGDVD 281
Query: 397 EA 398
A
Sbjct: 282 SA 283
>gi|242082594|ref|XP_002441722.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
gi|241942415|gb|EES15560.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
Length = 528
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 165/504 (32%), Positives = 279/504 (55%), Gaps = 29/504 (5%)
Query: 34 KTLFQIHSQIIINGFS-QKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRG 92
+ L +IH+ I +G + + K+ Y G + +A K+F++ NP + ++
Sbjct: 28 RELQRIHALAIAHGLHPHQQSVSCKIFRCYADFGRVADARKLFDEIPNPDLISFTSLMSL 87
Query: 93 HARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSN 152
H + + +++ L+ +++ PD + LS + G G VHG + G
Sbjct: 88 HLQLDNQREAISLFARVVAAGHRPDGFAVVGALSASSGAGDQVVGRAVHGLIFRLGLDGE 147
Query: 153 VFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFD 211
V + L+++Y +CG A +FD M + V+W S+L GY+K +D A FD
Sbjct: 148 VVVGNALIDMY----SQCGKFESAVKVFDRMSLKDEVTWGSMLHGYIKCAGVDSALSFFD 203
Query: 212 EMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKL 271
++P R+VV+WT +I+G Q + +AL LF M V +V LSACA+IG L L
Sbjct: 204 QVPVRSVVAWTALITGHVQGRQPVRALELFGRMVLEGHRPTHVTIVGVLSACADIGALDL 263
Query: 272 GKWIHSYVEE-NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMI 330
G+ IH Y + N S+ + ++NAL+ MYA G IE A+ VF+++Q +++ +WT+MI
Sbjct: 264 GRVIHGYGSKCNASLN-----IIVSNALMDMYAKSGHIEMAFSVFQEVQSKDSFTWTTMI 318
Query: 331 TGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGI 375
+ QG ++AL +TF+ VLSACSH G ++EG + F+ M Q + I
Sbjct: 319 SCCTVQGDGKKALELFQDMLRAGVVPNSVTFVSVLSACSHSGLIEEGIELFDRMRQLYKI 378
Query: 376 KPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQ 435
P +EHYGCM+DL R GL++EA +L+ +M ++P+ + SLL C + N LA ++A
Sbjct: 379 DPLLEHYGCMIDLLGRGGLLEEAEALIADMNVEPDIVIWRSLLSACLVRGNNRLA-EIAG 437
Query: 436 KLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHD 495
K + + +P Y+ L+ N+YA++ +W++ +RQ+M+ + + K PG SW++I+G +H+
Sbjct: 438 KEIVKREPGDDGVYV-LLWNMYASSNKWREAREMRQQMLSLKIFKKPGCSWIEIDGAVHE 496
Query: 496 FVAGDSTYKQASLIYKTLGEITMQ 519
F+ D T+ IY+TL ++ Q
Sbjct: 497 FLVEDKTHDARREIYETLEYMSRQ 520
>gi|449458231|ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
gi|449522932|ref|XP_004168479.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
Length = 705
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 170/554 (30%), Positives = 282/554 (50%), Gaps = 79/554 (14%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+H ++ GF ++ +L+ Y + +A KVF+K S WN M+ G+A +
Sbjct: 160 NLHCHVVQFGFQNHLHVGNELIGMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNY 219
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE--------------------- 136
+ ++ QM + EP+ T++ LLS ARCG E
Sbjct: 220 DVNGASRMFHQMELEGVEPNPVTWTSLLSSHARCGHLEETMVLFCKMRMKGVGPTAEMLA 279
Query: 137 --------------GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDM 182
G+ +HG ++ G+ +F + L+ LY GG VG A LF +M
Sbjct: 280 VVLSVCADLATLNSGQMIHGYMVKGGFNDYLFAKNALITLYGKGGG---VGDAEKLFHEM 336
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR--------NVVSWTTMISGCAQNGKS 234
+++VSWN+L+ + + G D A ++ ++ NV++W+ +I G A G
Sbjct: 337 KVKNLVSWNALISSFAESGVYDKALELLSQLEKMEAYPEMKPNVITWSAIICGFASKGLG 396
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV-----EENFSVGREP 289
++L +F +M+ A V + V + + LS CA + L LG+ +H +V ++N VG
Sbjct: 397 EESLEVFRKMQLANVKANSVTIASVLSICAMLAALNLGREMHGHVIRARMDDNVLVG--- 453
Query: 290 VLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------ 343
N LI+MY CG + + VF K++ R+++SW SMI G+ G ++AL
Sbjct: 454 ------NGLINMYTKCGSFKPGFMVFEKLENRDSISWNSMIAGYGTHGLGKDALATFNHM 507
Query: 344 ---------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGL 394
+TF+ LSACSH G V EG F M QN+ I+P IEHY CMVDL RAGL
Sbjct: 508 IKSGYRPDGVTFIAALSACSHAGLVAEGHWLFSQMRQNFKIEPEIEHYACMVDLLGRAGL 567
Query: 395 MDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVA 454
++EA ++++ MPM+PN + SLL CR+H + +LA + A K ++ ++ + ++ L++
Sbjct: 568 VEEASNIIKGMPMEPNAYIWSSLLNSCRMHKDTDLAEEAAAK-ISNLNSKITGSHM-LLS 625
Query: 455 NVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLG 514
N++AA+ RW+D A VR G++K PG SW+++ ++ F AG + + + + L
Sbjct: 626 NIFAASCRWEDSARVRISARAKGLKKVPGWSWIEVKKKVYMFKAGYTISEGLEKVDEILH 685
Query: 515 EITMQAMQEGYKPD 528
++ Q E Y+ D
Sbjct: 686 DLAFQI--ENYEID 697
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 194/406 (47%), Gaps = 34/406 (8%)
Query: 26 LLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTA- 84
LL+ N + Q+HS ++ G ++ A+L++ Y G + +A KVF +
Sbjct: 44 LLRQCNGIQHSKQVHSATVVTGAYCSAFVSARLVSIYSRYGLVSDARKVFGSAPFECYSN 103
Query: 85 --IWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHG 142
+WN +IR + +++ LY +M + D +T+ LL + G F + +H
Sbjct: 104 FLLWNSIIRANVYHGYCIEALQLYGKMRNYGVLGDGFTFPLLLRASSNLGAFNMCKNLHC 163
Query: 143 RVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGD 202
V+ G+ +++ + L+ +Y + AR +FD M +SVVSWN+++ GY D
Sbjct: 164 HVVQFGFQNHLHVGNELIGMYAKLE---RMDDARKVFDKMRIKSVVSWNTMVSGYAYNYD 220
Query: 203 IDGAWKIFDEMP----HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVA 258
++GA ++F +M N V+WT+++S A+ G + + LF +MR VG L
Sbjct: 221 VNGASRMFHQMELEGVEPNPVTWTSLLSSHARCGHLEETMVLFCKMRMKGVGPTAEMLAV 280
Query: 259 ALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM 318
LS CA++ L G+ IH Y+ + G L + NALI +Y G + +A +F +M
Sbjct: 281 VLSVCADLATLNSGQMIHGYMVKG---GFNDYLFA-KNALITLYGKGGGVGDAEKLFHEM 336
Query: 319 QRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
+ +N VSW ++I+ FA+ G +AL E E M +KP
Sbjct: 337 KVKNLVSWNALISSFAESGVYDKAL-----------------ELLSQLEKMEAYPEMKPN 379
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPM---KPNDAVLGSLLLGC 421
+ + ++ F+ GL +E+ + + M + K N + S+L C
Sbjct: 380 VITWSAIICGFASKGLGEESLEVFRKMQLANVKANSVTIASVLSIC 425
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 52/132 (39%), Gaps = 6/132 (4%)
Query: 7 IPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSG 66
+ AN T + L+ + + L + ++H +I + L+ Y G
Sbjct: 411 VKANSVTIASVLSICAMLAALNLGR------EMHGHVIRARMDDNVLVGNGLINMYTKCG 464
Query: 67 YLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLS 126
VFEK EN + WN MI G+ + ++ + MI PD T+ LS
Sbjct: 465 SFKPGFMVFEKLENRDSISWNSMIAGYGTHGLGKDALATFNHMIKSGYRPDGVTFIAALS 524
Query: 127 VCARCGLFREGE 138
C+ GL EG
Sbjct: 525 ACSHAGLVAEGH 536
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 166/507 (32%), Positives = 271/507 (53%), Gaps = 27/507 (5%)
Query: 49 SQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQ 108
++ + A ++ V G L A ++ + + W +I G++R+ P +VY +
Sbjct: 168 AKDAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNC 227
Query: 109 MIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGG 168
M+ PDE LS C++ + + L G + + NL+ +
Sbjct: 228 MLSDGVAPDEVAVIGALSACSK---LKNLDLGRLLHLLVGQ-KRIRMTDNLVVALIDMYA 283
Query: 169 ECG-VGCARLLFDDM-PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMIS 226
+CG + A+ +FD + + WN+++ GY K G +D A +FD+M R+V+++ +MI+
Sbjct: 284 KCGDIAQAQAVFDAVGRGQKPEPWNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMIT 343
Query: 227 GCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVG 286
G +G+ R AL LF +MRR + D +V+ L+ACA +G L G+ +H+ +E+ V
Sbjct: 344 GYIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTACASLGALPHGRALHASIEQRI-VE 402
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--- 343
+ V L AL+ MY CG ++EA VF +M R+ +WT+MI G A G ++AL
Sbjct: 403 ED---VYLGTALLDMYMKCGRVDEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDALESF 459
Query: 344 ------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSR 391
+T++ VL+ACSH +DEGR F M + P++EHYGCM+DL +R
Sbjct: 460 CQMKRDGFQPTSVTYIAVLTACSHSSLLDEGRLHFNEMRSLHKLHPQVEHYGCMIDLLAR 519
Query: 392 AGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLA 451
+GL+DEA LVQ MPM+PN + GS+L CR+H N +LA A+ L+ ++ PE+ A Y+
Sbjct: 520 SGLLDEAMHLVQTMPMQPNAVIWGSILSACRVHKNIDLARHAAEHLL-KLAPEEDAVYVQ 578
Query: 452 LVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYK 511
L N+Y +++W D VR M + GV+K G S + + G +H FVA D ++ I
Sbjct: 579 LY-NIYIDSRQWADAKRVRMLMEERGVKKTAGYSSITVAGQVHKFVANDQSHPWTLEIMA 637
Query: 512 TLGEITMQAMQEGYKPDISELFLGIEE 538
+ EI + GY P S + + ++E
Sbjct: 638 MMEEIACRLKSVGYSPVTSRIAVDVDE 664
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 135/280 (48%), Gaps = 56/280 (20%)
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
AR FD++PA+ V W +++ G V+ G +D A ++ + P RNVVSWT++I+G ++ G+
Sbjct: 159 ARRAFDEIPAKDAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRP 218
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
A+ FN M V D+VA++ ALSAC+++ K + + VG++ + ++
Sbjct: 219 ADAVYCFNCMLSDGVAPDEVAVIGALSACSKL------KNLDLGRLLHLLVGQKRIRMTD 272
Query: 295 N--NALIHMYASCGEIEEAYGVFRKMQR-------------------------------- 320
N ALI MYA CG+I +A VF + R
Sbjct: 273 NLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAIIDGYCKLGHVDVARSLFDQMGA 332
Query: 321 RNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQF 365
R+ +++ SMITG+ G ++AL T + +L+AC+ G + GR
Sbjct: 333 RDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTACASLGALPHGRAL 392
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
+ Q ++ + ++D++ + G +DEA ++ M
Sbjct: 393 HASIEQRI-VEEDVYLGTALLDMYMKCGRVDEATAVFHRM 431
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 126/317 (39%), Gaps = 40/317 (12%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEK 77
+T + +L+ + + Q + G QK ++ Y G++ A +F++
Sbjct: 270 MTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAIIDGYCKLGHVDVARSLFDQ 329
Query: 78 TENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+N MI G+ S ++ L+ QM D +T LL+ CA G G
Sbjct: 330 MGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTACASLGALPHG 389
Query: 138 EQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKG 196
+H + +V++ T L+++Y+ +CG V A +F M R V +W
Sbjct: 390 RALHASIEQRIVEEDVYLGTALLDMYM----KCGRVDEATAVFHRMGERDVHTW------ 439
Query: 197 YVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVAL 256
T MI+G A NG + AL F +M+R V
Sbjct: 440 -------------------------TAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTY 474
Query: 257 VAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFR 316
+A L+AC+ L G+ + E S+ + V +I + A G ++EA + +
Sbjct: 475 IAVLTACSHSSLLDEGRL---HFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQ 531
Query: 317 KM-QRRNTVSWTSMITG 332
M + N V W S+++
Sbjct: 532 TMPMQPNAVIWGSILSA 548
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 169/508 (33%), Positives = 271/508 (53%), Gaps = 60/508 (11%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H I F ++ + LL Y SG L +A +VFE S W MI G+AR
Sbjct: 273 LHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGL 332
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
+ SV L+ +M + PD +T + +L CA GL G+ VH + + S++F+
Sbjct: 333 SDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNA 392
Query: 159 LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
LM++Y +CG +G A +F +M + +VSWN+++ GY K
Sbjct: 393 LMDMY----AKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSK------------------ 430
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
N +AL+LF EM + + + + L ACA + L+ G+ IH
Sbjct: 431 -------------NSLPNEALNLFVEM-QYNSKPNSITMACILPACASLAALERGQEIHG 476
Query: 278 YVEEN-FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
++ N FS+ R + NAL+ MY CG + A +F + ++ VSWT MI G+
Sbjct: 477 HILRNGFSLDRH-----VANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMH 531
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
GY EA+ ++F+ +L ACSH G +DEG FF M N I+P+ EH
Sbjct: 532 GYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEH 591
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
Y C+VDL +RAG + +A+ ++ MP++P+ + G+LL GCRI+++ +LA +VA+ V E+
Sbjct: 592 YACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEH-VFEL 650
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+PE GY L+AN+YA A++W++V +R+++ + G+RK PG SW++I G +H FV GDS
Sbjct: 651 EPEN-TGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDS 709
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDI 529
++ A+ I L + + +EG+ P +
Sbjct: 710 SHPLANKIELLLKKTRTRMKEEGHFPKM 737
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/442 (27%), Positives = 209/442 (47%), Gaps = 52/442 (11%)
Query: 5 EIIPANPATSSKALTTRQIFSLLQIRNTTKTL---FQIHSQIIINGFSQKNYILAKLLAF 61
E+I +P L R S+LQ+ K++ +IHS I N + +KL+
Sbjct: 89 ELINQSPKPD---LELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFM 145
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQM------------ 109
YVT G L ++F+K N +WN ++ G+A+ +S+ L+K+M
Sbjct: 146 YVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESAR 205
Query: 110 --IDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSG 167
D+ + D +++ ++S GL +G + ++L G I T+L + +
Sbjct: 206 KLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLG------INTDLATMVSVVA 259
Query: 168 GECGVGCARL-------LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVS 220
G G L + + N LL Y K G+++ A ++F+ M R+VVS
Sbjct: 260 GCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVS 319
Query: 221 WTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVE 280
WT+MI+G A+ G S ++ LF+EM + + D + L ACA G L+ GK +H+Y++
Sbjct: 320 WTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIK 379
Query: 281 ENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQ 340
EN + + VS NAL+ MYA CG + +A+ VF +MQ ++ VSW +MI G++K
Sbjct: 380 ENKM--QSDLFVS--NALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPN 435
Query: 341 EAL--------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMV 386
EAL +T +L AC+ ++ G++ + +N G +V
Sbjct: 436 EALNLFVEMQYNSKPNSITMACILPACASLAALERGQEIHGHILRN-GFSLDRHVANALV 494
Query: 387 DLFSRAGLMDEAFSLVQNMPMK 408
D++ + G + A L +P K
Sbjct: 495 DMYLKCGALGLARLLFDMIPEK 516
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH I+ NGFS ++ L+ Y+ G L A +F+ W MI G+
Sbjct: 473 EIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHG 532
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+++ + +M + EPDE ++ +L C+ GL EG
Sbjct: 533 YGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEG 572
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 157/486 (32%), Positives = 258/486 (53%), Gaps = 65/486 (13%)
Query: 73 KVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCG 132
KVF++ WN ++ G A +++ ++M + PD +T S +L + A C
Sbjct: 125 KVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECA 184
Query: 133 LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNS 192
+ G +VHG +G+ S+VF+ ++L+++Y C R
Sbjct: 185 DVKRGLEVHGFAFRNGFDSDVFVGSSLIDMY--------ANCTR---------------- 220
Query: 193 LLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLD 252
D + K+FD +P R+ + W ++++GCAQNG +AL +F M +A V
Sbjct: 221 ----------TDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPV 270
Query: 253 QVALVAALSACAEIGDLKLGKWIHSYV-----EENFSVGREPVLVSLNNALIHMYASCGE 307
V + + C + L+ GK +H+YV E+N V ++++LI MY CGE
Sbjct: 271 PVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDN---------VFISSSLIDMYCKCGE 321
Query: 308 IEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSA 352
I A+ +F KM + VSWT+MI G+A G A+EAL +TFL VL+A
Sbjct: 322 ISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTA 381
Query: 353 CSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDA 412
CSH G VD+G ++F+ M+ ++GI P +EH+ + D RAG +DEA++ + M +KP +
Sbjct: 382 CSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTAS 441
Query: 413 VLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQK 472
V +LL CR+H N LA +VA+K++ E++P ++ L +N+Y+A+ RW + A +R+
Sbjct: 442 VWSTLLRACRVHKNTMLAEEVAKKIM-ELEPRSIGSHVVL-SNMYSASGRWNEAAHLRES 499
Query: 473 MIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISEL 532
M K G++K P SW+++ LH FVA D ++ I L + Q +EG+ P+ ++
Sbjct: 500 MRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGHVPNTEDV 559
Query: 533 FLGIEE 538
F IEE
Sbjct: 560 FQDIEE 565
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 135/300 (45%), Gaps = 40/300 (13%)
Query: 33 TKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRG 92
K ++H NGF ++ + L+ Y + KVF+ +WN ++ G
Sbjct: 186 VKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAG 245
Query: 93 HARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSN 152
A++ + E+++ ++++M+ P T+S L+ VC R G+Q+H V+ G+ N
Sbjct: 246 CAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDN 305
Query: 153 VFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFD 211
VFI ++L+++Y +CG + A +FD M + VVSW +++ GY
Sbjct: 306 VFISSSLIDMYC----KCGEISIAHCIFDKMSSPDVVSWTAMIMGY-------------- 347
Query: 212 EMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKL 271
A +G +R+AL LF M + + +A L+AC+ G +
Sbjct: 348 -----------------ALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDK 390
Query: 272 GKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVS-WTSMI 330
G W + N G P L AL GE++EAY KMQ + T S W++++
Sbjct: 391 G-WKYFKSMSN-HYGIVPTLEHF-AALADTLGRAGELDEAYNFISKMQIKPTASVWSTLL 447
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 146/386 (37%), Gaps = 72/386 (18%)
Query: 86 WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSF--LLSVCARCGLFREGEQVHGR 143
W Q IR A +V L+ +M S L CA GL G +H
Sbjct: 16 WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75
Query: 144 VLASGYCSNVFIRTNLMNLYL----------------MSGGECGVGCARLLFDDMPARSV 187
+ SG ++ F L+NLY + G R +FD+M R V
Sbjct: 76 AIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDV 135
Query: 188 VSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRA 247
VSWN T++ GCA+ G+ +AL +M R
Sbjct: 136 VSWN-------------------------------TLVLGCAEEGRHHEALGFVRKMCRE 164
Query: 248 RVGLDQVALVAALSACAEIGDLKLGKWIHSYVEEN-FSVGREPVLVSLNNALIHMYASCG 306
D L L AE D+K G +H + N F V + ++LI MYA+C
Sbjct: 165 GFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSD-----VFVGSSLIDMYANCT 219
Query: 307 EIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLS 351
+ + VF + R+ + W S++ G A+ G +EAL +TF ++
Sbjct: 220 RTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIP 279
Query: 352 ACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPND 411
C + + G+Q + G + + ++D++ + G + A + M P+
Sbjct: 280 VCGNLASLRFGKQLHAYVICG-GFEDNVFISSSLIDMYCKCGEISIAHCIFDKMS-SPDV 337
Query: 412 AVLGSLLLGCRIHNNAELASQVAQKL 437
++++G +H A A + +++
Sbjct: 338 VSWTAMIMGYALHGPAREALVLFERM 363
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 107/258 (41%), Gaps = 50/258 (19%)
Query: 221 WTTMISGCAQNGKSRQALSLFNEMRRARVGLDQV--ALVAALSACAEIGDLKLGKWIHSY 278
W I A G A+SLF MR + V +L AAL +CA +G LG +H+
Sbjct: 16 WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75
Query: 279 V------EENFSVG-------REPV--LVSLNNALIHMYASCGEIEEAYGVFRKMQRRNT 323
+ F+ + P L S A++ + S E VF +M R+
Sbjct: 76 AIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDV 135
Query: 324 VSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQ-------FFECMNQNWGIK 376
VSW +++ G A++G EA LG + GF + F EC + +K
Sbjct: 136 VSWNTLVLGCAEEGRHHEA----LGFVRKMCREGFRPDSFTLSTVLPIFAECAD----VK 187
Query: 377 PRIEHYG---------------CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL-GSLLLG 420
+E +G ++D+++ D + + N+P++ D +L SLL G
Sbjct: 188 RGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVR--DHILWNSLLAG 245
Query: 421 CRIHNNAELASQVAQKLV 438
C + + E A + ++++
Sbjct: 246 CAQNGSVEEALGIFRRML 263
>gi|413945386|gb|AFW78035.1| hypothetical protein ZEAMMB73_343828 [Zea mays]
Length = 608
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 163/523 (31%), Positives = 277/523 (52%), Gaps = 28/523 (5%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGH 93
+ + ++H++++ G + A L++ Y S L +A + F+ +++ ++
Sbjct: 18 RAVRRVHARLLKEGLADLPSAPALLVSAYARSCLLPDARRAFDDAPRRDLHLYSALLAAV 77
Query: 94 ARSETPEKSVYLYKQMI-DKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSN 152
+ S PE + L ++M+ D PD + + L S R R G Q+H AS Y ++
Sbjct: 78 SHSSDPELVLPLLRRMLSDDALRPDHFVLASLASAAGRLRSLRLGRQLHAHFAASPYSAD 137
Query: 153 VFIRTNLMNLYLMSGGECGVG-CARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFD 211
++++L+++Y +CGV AR +FD + ++ V W +L+ GY G A +F
Sbjct: 138 NVVKSSLIDMYC----KCGVPQDARKVFDSIGVKNSVVWTALISGYASNGCTGEALDLFQ 193
Query: 212 EMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL-DQVALVAALSACAEIGDLK 270
MP + +WT +ISG + G A+ LF EMRR + + D L + A++ L
Sbjct: 194 SMPAHGLFTWTALISGFVKAGNYTGAMGLFVEMRRDDIRIHDAFVLATVIGGAADLAALV 253
Query: 271 LGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMI 330
LG+ +H +V +G ++ + NAL+ MY+ C +I A VF + R+ +SWT+++
Sbjct: 254 LGRQLHGFV---MRLGFLSSMI-VGNALVDMYSKCSDIHSAREVFEGITVRDVISWTTIL 309
Query: 331 TGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGI 375
G A+ G A+E +TF+G++ ACSH G V +GRQ F+ M + +G+
Sbjct: 310 VGEAQHGRAEEVFALYNRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKREYGM 369
Query: 376 KPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQ 435
KP ++HY C +DL SR+G + EA L+ MP +P++A G+LL C+ HN+ ++ +VA
Sbjct: 370 KPGVQHYTCYLDLLSRSGYLSEAEKLITTMPYEPDEATWGALLSACKKHNDTQMCLRVAD 429
Query: 436 KLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHD 495
L+ E+ P+ + Y+ L++NVYA +W VA VR+ M +M +RK PG SWV+
Sbjct: 430 NLL-ELRPKDPSTYI-LLSNVYAVNCKWDSVAKVRKIMAEMEIRKVPGYSWVEAGRESRI 487
Query: 496 FVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
F AG+ I L E+ + + GY PD S + +EE
Sbjct: 488 FHAGEVPLDVGEEITCFLEELVSEMRKRGYVPDTSSVMHDLEE 530
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 163/518 (31%), Positives = 274/518 (52%), Gaps = 57/518 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H+ +I + Y+ +L+ Y L A VF++ + W MI G+++
Sbjct: 31 RVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMISGYSQRG 90
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++++L+ QM+ +TEP+E+T++ +LS C F G Q+H + Y +++F+ +
Sbjct: 91 FASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGS 150
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
+L+++Y +G + AR +F+ +P R VVS +++ GY
Sbjct: 151 SLLDMYAKAG---RIHEARGVFECLPERDVVSCTAIISGY-------------------- 187
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
AQ G +AL LF ++R + + V + L+A + + L GK +HS
Sbjct: 188 -----------AQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHS 236
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
+V P V L N+LI MY+ CG + A +F M R +SW +M+ G++K G
Sbjct: 237 HVLR----CELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHG 292
Query: 338 YAQEAL----------------LTFLGVLSACSHGGFVDEGRQFF-ECMNQNWGIKPRIE 380
E + +TFL VLS CSHGG D+G + F E MN I+ IE
Sbjct: 293 KGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIE 352
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HYGC++DL RAG ++EAF L++ MP +P A+ GSLL CR+H+N + V +L+ E
Sbjct: 353 HYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLL-E 411
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
I+PE A Y+ L +N+YA+A RW+DV VR+ M++ V K PG+SW++++ +H F A D
Sbjct: 412 IEPENAGNYVIL-SNLYASAGRWEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASD 470
Query: 501 STYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++ + ++ + E+ ++ + GY PD S + ++E
Sbjct: 471 RSHPRREEVFLKVRELLVKFKESGYVPDQSCVLYDVDE 508
>gi|242047514|ref|XP_002461503.1| hypothetical protein SORBIDRAFT_02g003670 [Sorghum bicolor]
gi|241924880|gb|EER98024.1| hypothetical protein SORBIDRAFT_02g003670 [Sorghum bicolor]
Length = 786
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/423 (37%), Positives = 244/423 (57%), Gaps = 33/423 (7%)
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMP-ARSVVSWNSLL 194
G VH + +G ++++R L++ Y G CG V R +FD++P R VV+WN++L
Sbjct: 149 GAHVHALAVKAGAAGDLYVRNALIHFY----GVCGDVAAMRKVFDELPLVRDVVTWNAVL 204
Query: 195 KGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQV 254
GYV+ G + A ++FD MP R+ VSW+T++ G + G+ AL +F M V ++
Sbjct: 205 AGYVRAGMVGVAREVFDGMPMRDEVSWSTVVGGYVKEGELEVALGVFKNMVVQGVKANEA 264
Query: 255 ALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN--NALIHMYASCGEIEEAY 312
A+V ALSA A++G L+ GK++H ++ R V +S+N AL+ MY+ CG + A
Sbjct: 265 AIVTALSAAAQLGLLEQGKFVHEVIK------RAGVAMSMNLGAALVDMYSKCGSVAAAK 318
Query: 313 GVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGG 357
VF M R+ +W SMI G A G +A+ +TF+GVL+ACS G
Sbjct: 319 EVFDAMPWRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTNITFVGVLNACSRTG 378
Query: 358 FVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSL 417
VDEGR +F+ M + +GI+ +EHYGCMVDL SRAGL+ EA L++ M + P+ + G++
Sbjct: 379 LVDEGRWYFKLMAEKYGIESEMEHYGCMVDLLSRAGLVQEAIELIEGMHIPPDPVLWGTV 438
Query: 418 LLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMG 477
L C+ H +L V KL+ E+DP GY L+A++YA AK+W +V VR+ M G
Sbjct: 439 LSACKRHGLVDLGITVGNKLI-ELDPAH-DGYYVLLASIYAKAKKWDEVRKVRKLMSNRG 496
Query: 478 VRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELF--LG 535
K G S ++ +G++H F+ GD +K + IY L I + + GY PD+S + +G
Sbjct: 497 TSKSAGWSLMEAHGIVHKFLVGDMDHKDSVQIYNMLCMIDRRLAEAGYVPDVSSVLHDIG 556
Query: 536 IEE 538
EE
Sbjct: 557 DEE 559
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 124/307 (40%), Gaps = 60/307 (19%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
+LA YV +G + A +VF+ W+ ++ G+ + E ++ ++K M+ + + +
Sbjct: 203 VLAGYVRAGMVGVAREVFDGMPMRDEVSWSTVVGGYVKEGELEVALGVFKNMVVQGVKAN 262
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCAR 176
E LS A+ GL +G+ VH + +G ++ + L+++Y +CG V A+
Sbjct: 263 EAAIVTALSAAAQLGLLEQGKFVHEVIKRAGVAMSMNLGAALVDMY----SKCGSVAAAK 318
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
+FD MP R V +WNS MI G A +G
Sbjct: 319 EVFDAMPWRDVFAWNS-------------------------------MICGLATHGLGHD 347
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
A+ LF + + V L+AC+ G + G+W + E + + E +
Sbjct: 348 AVQLFEKFVSEGFCPTNITFVGVLNACSRTGLVDEGRWYFKLMAEKYGIESE---MEHYG 404
Query: 297 ALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSH 355
++ + + G ++EA + M + V W + VLSAC
Sbjct: 405 CMVDLLSRAGLVQEAIELIEGMHIPPDPVLWGT--------------------VLSACKR 444
Query: 356 GGFVDEG 362
G VD G
Sbjct: 445 HGLVDLG 451
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 6/137 (4%)
Query: 2 LVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAF 61
+V + + AN A AL+ LL+ + F +H I G + + A L+
Sbjct: 254 MVVQGVKANEAAIVTALSAAAQLGLLE-----QGKF-VHEVIKRAGVAMSMNLGAALVDM 307
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
Y G + A +VF+ WN MI G A +V L+++ + + P T+
Sbjct: 308 YSKCGSVAAAKEVFDAMPWRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTNITF 367
Query: 122 SFLLSVCARCGLFREGE 138
+L+ C+R GL EG
Sbjct: 368 VGVLNACSRTGLVDEGR 384
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 161/516 (31%), Positives = 271/516 (52%), Gaps = 58/516 (11%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H Q++ GF ++ A L+ Y G + +AH+VF++ W MI + ++E
Sbjct: 154 VHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAER 213
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
P K++ L+++M ++ DE T + S + G R VHG + +G+
Sbjct: 214 PLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFI-------- 265
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
G+ VG NS++ Y K G+++ A +FD M RN
Sbjct: 266 ---------GDVSVG-----------------NSIVGMYAKCGNVERARLVFDRMEERNG 299
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
+SW +M+SG QNG+ ALSLFN+M+ + + V + +SAC+ +G LG+ +H++
Sbjct: 300 ISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNF 359
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFR--KMQRRNTVSWTSMITGFAKQ 336
V + + + +L NA++ MY CG+++ A +F ++ R+ SW +I+G+
Sbjct: 360 VISS----KMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVH 415
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G+ +EAL +TF +LSACSH G +DEGR+ F M + ++P ++H
Sbjct: 416 GHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTK-LSVRPEMKH 474
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
Y CMVD+ RAG ++EAF L++ +P +P+D V G+LLL CRIH N EL A L ++
Sbjct: 475 YACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLF-QL 533
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+PE GY L++N+YAA+ +W++V VRQ M G++KP S ++ +H F D
Sbjct: 534 EPEH-TGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQ 592
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIE 537
+ +Y+ + + ++ GY PD+S + +E
Sbjct: 593 SSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVE 628
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 211/449 (46%), Gaps = 75/449 (16%)
Query: 26 LLQIRNTTKTLFQIHSQIIINGFS-QKNYILAKLLAFYVTSGYLINAHKVFEK------- 77
LLQ + TL IHS + GF + LA+L+ Y G L +A +F+
Sbjct: 31 LLQCCTSLTTLKLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHHHG 90
Query: 78 -TENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
T+ P++ + N M+R +A + +++ LY M + +TY F+L VCA
Sbjct: 91 HTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVF 150
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLK 195
GE VHG+V+ +G+ S++F+ L+++Y +CG +G A +FD M R V
Sbjct: 151 GEVVHGQVVRTGFGSDLFVEAALVDMY----AKCGEIGDAHEVFDRMLIRDV-------- 198
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVA 255
V WT MI+ Q + +AL LF +M+ D++
Sbjct: 199 -----------------------VCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEIT 235
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
++ SA ++GD ++ +H Y N +G VS+ N+++ MYA CG +E A VF
Sbjct: 236 AISVASAVGQLGDGRMAISVHGYAVLNGFIGD----VSVGNSIVGMYAKCGNVERARLVF 291
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVD 360
+M+ RN +SW SM++G+ + G +AL +T L ++SACS+ G
Sbjct: 292 DRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKH 351
Query: 361 EGRQFFECMNQNWGIKPRIE----HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGS 416
GR+ N+ I +++ ++D++ + G +D A + N + D +
Sbjct: 352 LGRKL-----HNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWN 406
Query: 417 LLL-GCRIHNNAELASQVAQKLVAE-IDP 443
+L+ G +H + + A ++ ++ E ++P
Sbjct: 407 VLISGYGVHGHGKEALELFSRMQVEGVEP 435
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 169/515 (32%), Positives = 268/515 (52%), Gaps = 56/515 (10%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
IH I GF++ I L Y G + A +F+ + + WN M+ G+ ++
Sbjct: 270 IHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGE 329
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
PEK++ ++++M+++ +P T L CA G G+ VH V +
Sbjct: 330 PEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFV-------------D 376
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
+NL G + V NSL+ Y K +D A IF+ + R
Sbjct: 377 QLNL----GSDISV-----------------MNSLISMYSKCKRVDIASDIFNNLNGRTH 415
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
VSW MI G AQNG+ +AL+ F+EM+ + D +V+ + A AE+ + KWIH
Sbjct: 416 VSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGL 475
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ S + + V+ AL+ MY+ CG I A +F + R+ ++W +MI G+ G
Sbjct: 476 IIR--SCLDKNIFVT--TALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGL 531
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
+ AL +T+L V+SACSH G VDEG + F+ M Q++G++P ++HYG
Sbjct: 532 GRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYG 591
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
MVDL RAG + EA+ ++NMP+ P V G++L C+IH N E+ + A+KL E++P
Sbjct: 592 AMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLF-ELNP 650
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
++ GY L+AN+YA+ +W VA VR+ M K G++K PG S V++ +H F +G +T+
Sbjct: 651 DE-GGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTH 709
Query: 504 KQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
Q+ IY L E+ + GY PD + L L +E+
Sbjct: 710 PQSKRIYAFLEELVYEIKAAGYVPD-TNLILDVED 743
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 196/397 (49%), Gaps = 58/397 (14%)
Query: 26 LLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI 85
LL++ + K L QI +I NG ++ KL++ + G + A +VFE ++ A+
Sbjct: 55 LLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDAL 114
Query: 86 WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVL 145
++ M++G+A++ + E ++ +M + +P Y +++LL VC + G+++HG+++
Sbjct: 115 YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLI 174
Query: 146 ASGYCSNVFIRTNLMNLYLMSGGEC-GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDID 204
+ + +NVF T ++N+Y +C + A +FD MP R +VSWN
Sbjct: 175 TNSFAANVFAMTGVVNMY----AKCRQIDDAYKMFDRMPERDLVSWN------------- 217
Query: 205 GAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACA 264
T+I+G +QNG +++AL L M+ D + LV L A A
Sbjct: 218 ------------------TIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAA 259
Query: 265 EIGDLKLGKWIHSY-VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNT 323
++G L +GK IH Y + F+ LV+++ AL MY+ CG +E A +F M ++
Sbjct: 260 DVGLLMVGKSIHGYAIRAGFA-----KLVNISTALADMYSKCGSVETARLIFDGMDQKTV 314
Query: 324 VSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFEC 368
VSW SM+ G+ + G ++A+ +T + L AC+ G ++ G+ +
Sbjct: 315 VSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKF 374
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
++Q + I ++ ++S+ +D A + N+
Sbjct: 375 VDQ-LNLGSDISVMNSLISMYSKCKRVDIASDIFNNL 410
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 53/121 (43%)
Query: 17 ALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFE 76
+ T + L + T+ IH II + + ++ L+ Y G + A K+F+
Sbjct: 450 SFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFD 509
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
+ WN MI G+ ++ L+ +M EP++ TY ++S C+ GL E
Sbjct: 510 MISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDE 569
Query: 137 G 137
G
Sbjct: 570 G 570
>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 840
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/501 (31%), Positives = 264/501 (52%), Gaps = 60/501 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H II +GF Y+ + L+ Y G L +A + + E WN MI G
Sbjct: 257 QVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHG 316
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E+++ L+ +M +++ D++TY +L A C + GE VH + +G+
Sbjct: 317 YMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGF-------- 368
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
A VS N+L+ Y K+G++ A +F+++ ++
Sbjct: 369 -------------------------DACKTVS-NALVDMYAKQGNLSCALDVFNKILDKD 402
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
V+SWT++++G NG +AL LF +MR ARV LDQ + SACAE+ ++ G+ +H+
Sbjct: 403 VISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHA 462
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
NF L+S N+LI MYA CG +E+A VF M+ RN +SWT++I G+A+ G
Sbjct: 463 ----NFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVFDSMETRNVISWTAIIVGYAQNG 518
Query: 338 YAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDE 397
V+ G+ +FE M + +GIKP +HY CM+DL RAG ++E
Sbjct: 519 --------------------LVETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKINE 558
Query: 398 AFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVY 457
A L+ M ++P+ + SLL CR+H N EL + + L+ +++P + Y+ L++N++
Sbjct: 559 AEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLI-KLEPSNSLPYV-LLSNMF 616
Query: 458 AAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEIT 517
+ A RW+D A +R+ M MG+ K PG SW+++ +H F++ D ++ A+ IY + E+
Sbjct: 617 SVAGRWEDAAHIRRAMKTMGINKEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMM 676
Query: 518 MQAMQEGYKPDISELFLGIEE 538
+ + G+ PD++ ++E
Sbjct: 677 ILIKEAGHVPDMNFALRDMDE 697
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 138/285 (48%), Gaps = 34/285 (11%)
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
AR LFD MP R +WN ++ Y G++ A K+F+E P +N ++W++++SG +NG
Sbjct: 56 ARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCE 115
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY-----VEENFSVGREP 289
+ L F++M Q L + L AC+ + L GK IH Y +E N V
Sbjct: 116 VEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVA--- 172
Query: 290 VLVSLNNALIHMYASCGEIEEA-YGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----- 343
L+ MY+ C + EA Y F R+N V WT+M+TG+A+ G + +A+
Sbjct: 173 ------TGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKE 226
Query: 344 ----------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAG 393
TF +L+AC+ GRQ C+ + G P + +VD++++ G
Sbjct: 227 MRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWS-GFGPNVYVQSALVDMYAKCG 285
Query: 394 LMDEAFSLVQNMPMKPNDAVL-GSLLLGCRIHNNAELASQVAQKL 437
+ A ++ M + +D V S+++GC H E A + K+
Sbjct: 286 DLASARMILDTMEI--DDVVCWNSMIVGCVTHGYMEEALVLFHKM 328
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 131/297 (44%), Gaps = 37/297 (12%)
Query: 50 QKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQM 109
+ Y +++ Y G L+ A K+F +T ++ W+ ++ G+ ++ + + + QM
Sbjct: 66 RDKYTWNIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQM 125
Query: 110 IDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGE 169
+P +YT +L C+ L G+ +H + +N+F+ T L+++Y S +
Sbjct: 126 WSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMY--SKCK 183
Query: 170 CGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCA 229
C + L F ++ V W ++L GY A
Sbjct: 184 CLLEAEYLFFSLPDRKNYVQWTAMLTGY-------------------------------A 212
Query: 230 QNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREP 289
QNG+S +A+ F EMR + + + L+AC I G+ +H + G P
Sbjct: 213 QNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCI---IWSGFGP 269
Query: 290 VLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
V + +AL+ MYA CG++ A + M+ + V W SMI G GY +EAL+ F
Sbjct: 270 N-VYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLF 325
>gi|449440231|ref|XP_004137888.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
gi|449521725|ref|XP_004167880.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 521
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 173/518 (33%), Positives = 274/518 (52%), Gaps = 73/518 (14%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKTENPSTAIWNQMIR 91
K L Q + I+ GF I+ KL+AF S G L +A +F++T + I N MIR
Sbjct: 13 KELEQAQAFIVKAGFYNHIPIITKLIAFSSLSPLGSLPHACALFQETSMDDSFICNTMIR 72
Query: 92 GHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR---CG-----------LFREG 137
++ + P K++ +Y +M + + D +TY+F+L CAR C + R+G
Sbjct: 73 AYSNTVFPLKALLIYNRMQRMDVDSDHFTYNFVLRACARAIKCTEMDDQCFGHHIISRKG 132
Query: 138 EQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDM--------------- 182
++H R+L G+ + ++ +L+ +Y SG VG ARL+F++M
Sbjct: 133 SEIHARILKLGFDQDHHVQNSLLLVYSGSGL---VGFARLIFNEMTVKTAVSWNIMMSAY 189
Query: 183 ----------------PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMIS 226
P + VSWN+LL Y++ ++ A K+F+EMP R+VVSW ++IS
Sbjct: 190 NRVHDYKSADVLLESMPQTNAVSWNTLLARYIRLNNLVAARKVFEEMPERDVVSWNSIIS 249
Query: 227 GCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVG 286
G + AL LF+ M++ + +V ++ L ACAE+G L++GK IH ++E
Sbjct: 250 GYVNVKDYKGALDLFHSMKQWNIRATEVTFISILGACAELGALEIGKKIHDSLKEK---- 305
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--- 343
+ L NA++ MYA CGE+ A VF +M+ + W +MI G A G+ + AL
Sbjct: 306 HYRIEGYLGNAIVDMYAKCGELGLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERALEMF 365
Query: 344 --------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLF 389
+TF+ +L ACSH G + EGR FF M + I P ++HYGCM+DL
Sbjct: 366 DSMKAEDGDHKPNRITFIALLIACSHKGLLAEGRHFFSLMVTKYKIMPDLKHYGCMIDLL 425
Query: 390 SRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGY 449
SR G ++EA+ +++ P + +LL GCR+H + EL + +KL AE++P + Y
Sbjct: 426 SRWGFLEEAYVMIKTCPFSSCSVLWRTLLGGCRLHRHVELGEESFRKL-AELEPGKDGDY 484
Query: 450 LALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWV 487
+ L++N+YA +RW DV +R++MI GV K G S V
Sbjct: 485 V-LLSNIYAEEERWDDVERLRKEMINYGVCKKAGSSHV 521
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/478 (34%), Positives = 260/478 (54%), Gaps = 64/478 (13%)
Query: 85 IWNQMIRGH----ARSETPEKS-VYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
+WN +IR H A+ P S + ++ +M +PD +T+ FLL A L G
Sbjct: 26 LWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRS 85
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVK 199
VH ++L G + F++T+L+++Y SG
Sbjct: 86 VHAQILRFGLAIDPFVQTSLISMYSSSG-------------------------------- 113
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG---LDQVAL 256
+D A +F MP RNV+SW+ MI+G + G+ ++AL+LF EM+ V ++ +
Sbjct: 114 --LVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTM 171
Query: 257 VAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFR 316
L+AC +G L+ GKW H+Y+++ PV V L ALI MYA CG +E+A VF
Sbjct: 172 SGVLAACGRLGALEHGKWAHAYIDKC----GMPVDVVLGTALIDMYAKCGSVEKATWVFS 227
Query: 317 KM-QRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVD 360
+ ++ ++W++MI+G A G A+E + +TFL V AC HGG V
Sbjct: 228 NLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVS 287
Query: 361 EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
EG+ + M +++ I P I+HYGCMVDL+ RAG + EA+++V++MPM+P+ V G+LL G
Sbjct: 288 EGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSG 347
Query: 421 CRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRK 480
R+H + E +KL+ E++P + Y+ L++NVYA RW+DV VR M MG++K
Sbjct: 348 SRMHGDIETCELALKKLI-ELEPTNSGAYV-LLSNVYAKRGRWEDVRHVRDLMETMGIKK 405
Query: 481 PPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
PG S +++ GVLH+F GD ++ + I+ L EI + EGY + E+ L ++E
Sbjct: 406 VPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLLDLDE 463
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 137/305 (44%), Gaps = 44/305 (14%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H+QI+ G + ++ L++ Y +SG + A +F + W+ MI G+ R
Sbjct: 86 VHAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQ 145
Query: 99 PEKSVYLYKQMI---DKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
++++ L+++M + P+E+T S +L+ C R G G+ H + G +V +
Sbjct: 146 YKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVL 205
Query: 156 RTNLMNLYLMSGGECG-VGCARLLFDDM-PARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
T L+++Y +CG V A +F ++ P + V++W++
Sbjct: 206 GTALIDMY----AKCGSVEKATWVFSNLGPNKDVMAWSA--------------------- 240
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK 273
MISG A +G + + + LF++M V + V +A AC G + GK
Sbjct: 241 ----------MISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGK 290
Query: 274 WIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITG 332
+ E++S+ + ++ +Y G I+EA+ V + M + + W ++++G
Sbjct: 291 DYLRRMTEDYSIIPT---IQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSG 347
Query: 333 FAKQG 337
G
Sbjct: 348 SRMHG 352
>gi|359488917|ref|XP_002283393.2| PREDICTED: ATP-dependent zinc metalloprotease FTSH 6,
chloroplastic-like [Vitis vinifera]
Length = 1146
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 171/501 (34%), Positives = 260/501 (51%), Gaps = 69/501 (13%)
Query: 21 RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKT 78
+Q SLL + ++ K LFQI +I LL F +S G L +A + +
Sbjct: 670 QQCLSLLNLCSSMKHLFQIRGH---------GFIAGPLLRFCASSPLGNLNHARVLLSGS 720
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE 138
E + WN +IR +A ++P +++ Y +M PD+ T+ LL CA F EG
Sbjct: 721 EKSEVSSWNDLIRSYATRDSPREAIGAYLEMRSLGISPDKLTFPILLKACAAISAFNEGR 780
Query: 139 QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYV 198
++ V+ G NV+++ +++ Y G C
Sbjct: 781 KIQVDVMKHGLDCNVYVQNTMIHFY----GSC---------------------------- 808
Query: 199 KRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVA 258
KR I A ++FDEM +R VVSW ++S C N + LF +MR + D+ +V
Sbjct: 809 KR--IRDARRMFDEMSYRTVVSWNAVLSACVDNEWLNDSFGLFVKMRGSGFDPDETTMVI 866
Query: 259 ALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM 318
LSAC+E+G+L G+W+HS V E V V L AL+ MYA CG + EA VF +M
Sbjct: 867 LLSACSELGNLSFGRWVHSQVIEKGMV----VNCRLGTALVDMYAKCGAVCEASLVFHRM 922
Query: 319 QRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGR 363
RN +W++MI G A+ G+A+EAL +TFLGVL ACSH G VD+G
Sbjct: 923 LERNVWTWSAMILGLAQHGFAKEALELFPKMKQSSISPNYVTFLGVLCACSHAGLVDDGY 982
Query: 364 QFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRI 423
+FF M GI+P + HYG MVD+ SRAG + EA++ + NMP++ + V +LL C I
Sbjct: 983 RFFHDMEYVHGIEPMMIHYGAMVDILSRAGRLKEAYNFILNMPVEADPVVWRTLLSACTI 1042
Query: 424 H---NNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRK 480
H +N + +V ++L+ E++P + +G +VAN+YA +W A VR+ M G++K
Sbjct: 1043 HGINDNDGVGDKVRKRLL-ELEPRR-SGNFVMVANMYAEVGKWDKAANVRRTMKDTGLKK 1100
Query: 481 PPGQSWVQINGVLHDFVAGDS 501
G+S +++ G +H F +GD
Sbjct: 1101 MAGESCIEVGGSIHRFFSGDD 1121
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 178/574 (31%), Positives = 285/574 (49%), Gaps = 90/574 (15%)
Query: 11 PATSSKALTTRQIFS-LLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLI 69
P+ SS T + LL L QIH+QII++GF + I L+ Y
Sbjct: 42 PSLSSSTYTNYLHYPRLLSSCKHLNPLLQIHAQIIVSGFKHHHSI-THLINLYSLFHKCD 100
Query: 70 NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
A VF+ T NPS +WN MIR + RS+ +++ +Y M++K
Sbjct: 101 LARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKG---------------- 144
Query: 130 RCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVS 189
GL R+ VFI L+++Y G + AR +FD MP R VV+
Sbjct: 145 --GLERD----------------VFIGAGLVDMYSKMGD---LKRAREVFDKMPKRDVVA 183
Query: 190 WNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCA-------------------- 229
WN+++ G + D A ++FD+M ++ VSW TM++G A
Sbjct: 184 WNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNV 243
Query: 230 ----------QNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV 279
QNG +++A+S F++MR + V V+ L A A + + G H+ +
Sbjct: 244 TWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACI 303
Query: 280 EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYA 339
+ + V N+LI MYA CG+++ + +F +M ++TVSW +M++G+A G+
Sbjct: 304 IQMGFLSNTLV----GNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHG 359
Query: 340 QEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGC 384
A+ ++F+ VLSAC H G V+EGR+ F M+ + IKP +EHY C
Sbjct: 360 DRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYAC 419
Query: 385 MVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPE 444
MVDL RAGL DE ++ MP++P+ V G+LL CR+H+N +L +VA + +++P
Sbjct: 420 MVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLG-EVALDHLVKLEPR 478
Query: 445 QAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYK 504
A ++ L +++YA + RW D R KM +G++K PG SWV++ +H F GD ++
Sbjct: 479 NPAHFVVL-SSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHP 537
Query: 505 QASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
Q ++ + + + GY PD S + +EE
Sbjct: 538 QLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEE 571
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 174/526 (33%), Positives = 285/526 (54%), Gaps = 49/526 (9%)
Query: 53 YILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDK 112
+ L K++A V SG + A +VF +T WN ++ G S+ P + + + Q+ D+
Sbjct: 62 FPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIG--ISKDPSRMMEAH-QLFDE 118
Query: 113 ETEPDEYTYSFLLSVCARCGLFREGEQVHGRV----------LASGYCSN---------- 152
EPD ++Y+ +LS R F + + R+ + +GY
Sbjct: 119 IPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELF 178
Query: 153 -VFIRTNLMNLYLMSGG--ECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWK 208
+ N ++ M G ECG + A F P R VV+W +++ GY+K ++ A
Sbjct: 179 YSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEA 238
Query: 209 IFDEMP-HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIG 267
+F +M ++N+V+W MISG +N + L LF M + + L +AL C+E+
Sbjct: 239 MFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELS 298
Query: 268 DLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
L+LG+ IH V ++ L SL I MY CGE+ +A+ +F M++++ V+W
Sbjct: 299 ALQLGRQIHQIVSKSTLCNDVTALTSL----ISMYCKCGELGDAWKLFEVMKKKDVVAWN 354
Query: 328 SMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQN 372
+MI+G+A+ G A +AL +TF+ VL AC+H G V+ G +FE M ++
Sbjct: 355 AMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRD 414
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQ 432
+ ++P+ +HY CMVDL RAG ++EA L+++MP +P+ AV G+LL CR+H N ELA
Sbjct: 415 YKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEF 474
Query: 433 VAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGV 492
A+KL+ +++ + AAGY+ L AN+YA+ RW+DVA VR++M + V K PG SW++I
Sbjct: 475 AAEKLL-QLNSQNAAGYVQL-ANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNK 532
Query: 493 LHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+H F + D + + I+K L E+ + GYKP++ +EE
Sbjct: 533 VHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEE 578
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Query: 2 LVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAF 61
++EE I N + S AL S LQ+ QIH + + L L++
Sbjct: 275 MLEEGIRPNSSGLSSALLGCSELSALQLGR------QIHQIVSKSTLCNDVTALTSLISM 328
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
Y G L +A K+FE + WN MI G+A+ +K++ L+++MID + PD T+
Sbjct: 329 YCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITF 388
Query: 122 SFLLSVCARCGLFREG 137
+L C GL G
Sbjct: 389 VAVLLACNHAGLVNIG 404
>gi|218198855|gb|EEC81282.1| hypothetical protein OsI_24392 [Oryza sativa Indica Group]
Length = 1349
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 159/490 (32%), Positives = 270/490 (55%), Gaps = 27/490 (5%)
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
G L +A + + W +I ++R++ +++V +K M+ + PD+ T +L
Sbjct: 188 GMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVL 247
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDM-P 183
S C++ G +H V G + + L+++Y +CG G AR +FD +
Sbjct: 248 SACSQLKDLELGCSLHSLVKEKGMSMSENLVVALIDMY----AKCGDFGHAREVFDAVGR 303
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
R SWN+++ GY K G +D A +FD+M R+++++ +MI+G +G+ R+AL LF
Sbjct: 304 GRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMN 363
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
MRR + +D +V+ LSACA +G L G+ +H+ +E + + AL+ MY
Sbjct: 364 MRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETD----IYIGTALLDMYM 419
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLG 348
CG + EA VF++M +R+ +WT+MI G A G + L ++++
Sbjct: 420 KCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIA 479
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
VL+ACSH ++EGR +F+ M + I P+IEHYGCM+DL R+GL+DEA LV+ MPM+
Sbjct: 480 VLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQ 539
Query: 409 PNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAA 468
PN + S+L CR+H +LA A+ L+ +I+P++ A Y+ L N+ +++W+D +
Sbjct: 540 PNSVIWASILSACRVHKRIDLAQCAAEHLL-KIEPDEDAVYVQLY-NICIDSRKWEDASK 597
Query: 469 VRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
+R M + V+K G S V + G +H FV D ++ + I L EI+ + GY P
Sbjct: 598 IRMLMEERQVKKTAGYSSVTVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSAGYSPI 657
Query: 529 ISELFLGIEE 538
S++ + ++E
Sbjct: 658 TSQVTVDVDE 667
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 178/379 (46%), Gaps = 65/379 (17%)
Query: 82 STAIWNQMIRGHARSET----PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE- 136
ST +++ +R R+ T P+ L+++M PD +T+ FL C+ R
Sbjct: 66 STFLFDTALRACFRAGTSSGDPDIPFVLFRRMRRAAVRPDGFTFHFLFK-CSSSSRPRAL 124
Query: 137 -GEQVHGRVLASGYCSNV-FIRTNLMNLYLMSGGECGV-GCARLLFDDMPARSVVSWNSL 193
+H L + S F+ +L+++Y E G+ G R FD++P + VSW +
Sbjct: 125 LCTMLHAACLRTMLPSAAPFVANSLIHMY----TELGLAGDVRRAFDEIPVKDAVSWTMV 180
Query: 194 LKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQ 253
+ G K G + A + + P R+V+SWT++I+ ++ ++++A+ F M + D
Sbjct: 181 ISGLAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDD 240
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGE------ 307
V ++ LSAC+++ DL+LG +HS V+E E ++V ALI MYA CG+
Sbjct: 241 VTVIGVLSACSQLKDLELGCSLHSLVKEKGMSMSENLVV----ALIDMYAKCGDFGHARE 296
Query: 308 --------------------------IEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQE 341
++ A +F +M+ R+ +++ SMITG+ G +E
Sbjct: 297 VFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLRE 356
Query: 342 ALLTFL---------------GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMV 386
ALL F+ +LSAC+ G + +GR C+ ++ I ++
Sbjct: 357 ALLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRL-VETDIYIGTALL 415
Query: 387 DLFSRAGLMDEAFSLVQNM 405
D++ + G ++EA + Q M
Sbjct: 416 DMYMKCGRVNEATIVFQRM 434
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 186/419 (44%), Gaps = 55/419 (13%)
Query: 38 QIHSQIIINGFSQKNYILAK-LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
Q+H ++ G+ N L+ L+ Y G ++ K + WN ++ +A
Sbjct: 916 QLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNSILSMYADR 975
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGY-CSNVFI 155
+++VY KQM+ P ++ LL++ + G ++ G Q+HG V G+ CS+V +
Sbjct: 976 GHMKEAVYYLKQMLWHGKMPSIRSFVSLLALSGKTGDWQLGVQIHGIVHKLGFSCSSVHV 1035
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
+T L+++Y G C + +F+++P+ ++ NSL+ ++ D A +I M
Sbjct: 1036 QTTLIDMY---GKCCCFDHSLAIFNEIPSIALECCNSLITSSLRCNMFDAALEILHCMIV 1092
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
V S + +A+SL + +L++C + +
Sbjct: 1093 EGVTPDDVTFSA------TMKAISL--------------SASPSLTSC---------QML 1123
Query: 276 HS-YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
HS V+ F + +++ ++LI YA G++ ++ +F + N + +T++I+ A
Sbjct: 1124 HSCLVKLGFEMD-----MAVCSSLITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACA 1178
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
+ G A+ +TFL ++ C G +EGR E M + + P
Sbjct: 1179 RYGDGARAMELFDQMVSSGLKPDNVTFLCAIAGCDQAGMFEEGRLVIELMRASRELDPDE 1238
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
H+ CMV+L SR G + EA +++ P++ SLL C+ H L + A L+
Sbjct: 1239 RHFACMVNLLSRDGFVKEAMEMMEQSPLRHYTKAWSSLLQSCKAHGENVLGKRAANMLI 1297
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 118/262 (45%), Gaps = 42/262 (16%)
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHG 142
A N+MI G R +++ +Y+ M+ +T+S +L VC+ E Q+HG
Sbjct: 762 VASLNRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCST----YEALQLHG 817
Query: 143 RVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGD 202
RVLA G C N F+ + L+N Y+ + P S+
Sbjct: 818 RVLALGLCCNPFVGSALVNHYMHV--------------ESPHASL--------------- 848
Query: 203 IDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSA 262
+F E+P +N ++ G + + + F +MRR + L+ ++ A+
Sbjct: 849 -----SLFRELPLQNTAMCNVVLRGLGNLKLTEELICCFLDMRRQYLELNGLSYCYAMKG 903
Query: 263 CAEIGD-LKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR 321
C + G+ L+ G+ +H V G P + L+N+L+ +Y++ G+ + +
Sbjct: 904 CYQNGEWLEQGRQLHGVV---LKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSE 960
Query: 322 NTVSWTSMITGFAKQGYAQEAL 343
+ +SW S+++ +A +G+ +EA+
Sbjct: 961 DVISWNSILSMYADRGHMKEAV 982
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 116/273 (42%), Gaps = 40/273 (14%)
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
Y G++ A +F++ E +N MI G+ S +++ L+ M + D +T
Sbjct: 317 YCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVDNFTV 376
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFD 180
LLS CA G +G +H + ++++I T L+++Y+ +CG V A ++F
Sbjct: 377 VSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYM----KCGRVNEATIVFQ 432
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSL 240
M R V +W T MI+G A NG + L
Sbjct: 433 RMGKRDVHAW-------------------------------TAMIAGLAFNGMGKAGLEY 461
Query: 241 FNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIH 300
F +MR + V+ +A L+AC+ L G+ + +++ + + +I
Sbjct: 462 FYQMRCDGFQPNPVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQ---IEHYGCMID 518
Query: 301 MYASCGEIEEAYGVFRKM-QRRNTVSWTSMITG 332
+ G ++EA + + M + N+V W S+++
Sbjct: 519 LLGRSGLLDEAMDLVKTMPMQPNSVIWASILSA 551
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 9/142 (6%)
Query: 1 MLVEEIIPANPATSS--KALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKL 58
M+VE + P + S+ KA++ SL + +HS ++ GF + + L
Sbjct: 1090 MIVEGVTPDDVTFSATMKAISLSASPSLTSCQ-------MLHSCLVKLGFEMDMAVCSSL 1142
Query: 59 LAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDE 118
+ Y +G L ++H +FE +P+ + +I AR +++ L+ QM+ +PD
Sbjct: 1143 ITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELFDQMVSSGLKPDN 1202
Query: 119 YTYSFLLSVCARCGLFREGEQV 140
T+ ++ C + G+F EG V
Sbjct: 1203 VTFLCAIAGCDQAGMFEEGRLV 1224
>gi|357496515|ref|XP_003618546.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493561|gb|AES74764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 637
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 179/516 (34%), Positives = 277/516 (53%), Gaps = 37/516 (7%)
Query: 38 QIHSQIIINGF--SQKNYILAKLLAFYVTSGYLINAHKVFEKT--ENPSTAIWNQMIRGH 93
Q+H+ I+ G S +++ LL Y + +A K+F++ + + + +IR H
Sbjct: 41 QLHATAIVTGLISSPNHFLRNALLHLYGSCSLPSHARKLFDEIPQSHKDSVDYTALIR-H 99
Query: 94 ARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCG--LFREGEQVHGRVLASGYCS 151
P +S+ L+ QM + D L+ CAR G + G Q+H V+ G+
Sbjct: 100 C---PPFESLKLFIQMRQFDLPLDGVVMVCALNACARLGGGDTKVGSQMHVGVVKFGFVK 156
Query: 152 NVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFD 211
+ LMN+Y+ G VG AR +F+ + RSVVSW+ L+G VK ++ +FD
Sbjct: 157 FDKVCNALMNVYVKFGL---VGEARKMFEGIEVRSVVSWSCFLEGLVKWESVESGRVLFD 213
Query: 212 EMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR-RARVGLDQVALVAALSACAEIGDLK 270
EMP RN V+WT MI G NG +++A L EM L V L + LSAC++ GD+
Sbjct: 214 EMPERNEVAWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTLCSVLSACSQSGDVC 273
Query: 271 LGKWIHSYV--EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTS 328
+G+W+H Y E G V + +L+ MYA CG I A VFR M +RN V+W +
Sbjct: 274 VGRWVHCYAVKEMGLDFG-----VMVGTSLVDMYAKCGRINAALSVFRSMLKRNVVAWNA 328
Query: 329 MITGFAKQGYAQEAL--------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWG 374
M+ G A G + A+ +TF+ +LSACSH G V++G +F + +
Sbjct: 329 MLGGLAMHGMGKIAVDMFPSMVEEVKPDGVTFMALLSACSHSGLVEKGWDYFHDLEPVYR 388
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVA 434
IKP IEHY CMV L RAG ++EA +V+NM + PN+ VLGSL+ C H +L ++
Sbjct: 389 IKPEIEHYACMVGLLGRAGRLEEAEIMVKNMRIPPNEVVLGSLIGSCYAHGRLQLGEKIM 448
Query: 435 QKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLH 494
+ L+ E+DP Y +++N+YA + + + ++RQ + K G++K PG S + ++G LH
Sbjct: 449 RDLL-EMDPLNTE-YHIVLSNMYALSGKVEKANSLRQVLKKRGIKKVPGMSSIYVDGKLH 506
Query: 495 DFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
F+AGD ++ + S IY L E+ + GY P+ S
Sbjct: 507 QFIAGDKSHTRTSEIYMKLDEMICRLRSAGYVPNTS 542
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/514 (31%), Positives = 268/514 (52%), Gaps = 60/514 (11%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
I + NG +++ L+ YV L +AH++F++ + W MI +++ +
Sbjct: 83 ICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKI 142
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
+K++ L M+ P+ YTYS SV C + +H ++ G S+VF+R+
Sbjct: 143 HQKALELLVLMLRDNVRPNVYTYS---SVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSA 199
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
L++++ K G+ + A +FDEM +
Sbjct: 200 LIDVF----------------------------------AKLGEPEDALSVFDEMVTGDA 225
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
+ W ++I G AQN +S AL LF M+RA +Q L + L AC + L+LG H +
Sbjct: 226 IVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVH 285
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ V + L+ LNNAL+ MY CG +E+A VF +M+ R+ ++W++MI+G A+ GY
Sbjct: 286 I-----VKYDQDLI-LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGY 339
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
+QEAL +T +GVL ACSH G +++G +F M + +GI P EHYG
Sbjct: 340 SQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYG 399
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
CM+DL +AG +D+A L+ M +P+ +LL CR+ N LA A+K++A +DP
Sbjct: 400 CMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIA-LDP 458
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
E A Y L++N+YA +++W V +R +M G++K PG SW+++N +H F+ GD+++
Sbjct: 459 EDAGTY-TLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSH 517
Query: 504 KQASLIYKTLGEITMQAMQEGYKPDISELFLGIE 537
Q + K L ++ + GY P+ + + +E
Sbjct: 518 PQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLE 551
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 135/307 (43%), Gaps = 40/307 (13%)
Query: 25 SLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTA 84
S+L+ N + +H II G ++ + L+ + G +A VF++
Sbjct: 167 SVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAI 226
Query: 85 IWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRV 144
+WN +I G A++ + ++ L+K+M ++ T + +L C L G Q H +
Sbjct: 227 VWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHI 286
Query: 145 LASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDID 204
+ Y ++ + L+++Y G + A +F+ M R V++W++++ G
Sbjct: 287 VK--YDQDLILNNALVDMYCKCG---SLEDALRVFNQMKERDVITWSTMISGL------- 334
Query: 205 GAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACA 264
AQNG S++AL LF M+ + + + +V L AC+
Sbjct: 335 ------------------------AQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACS 370
Query: 265 EIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNT 323
G L+ G + +++ + G +PV +I + G++++A + +M+ +
Sbjct: 371 HAGLLEDGWYYFRSMKKLY--GIDPVREHY-GCMIDLLGKAGKLDDAVKLLNEMECEPDA 427
Query: 324 VSWTSMI 330
V+W +++
Sbjct: 428 VTWRTLL 434
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 158/538 (29%), Positives = 273/538 (50%), Gaps = 73/538 (13%)
Query: 14 SSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV---TSGYLIN 70
++ L + SL+ T K L QI + I + ++ K + F T + +
Sbjct: 20 TTSLLPLPHLISLIPKCTTLKELKQIQAYTIKTNYQNNTNVITKFINFCTSNPTKASMEH 79
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
AH++F++ P+ ++N M RG+AR P + + +++ L + ++
Sbjct: 80 AHQLFDQITQPNIVLFNTMARGYARLNDPLRMITHFRR---------------CLRLVSK 124
Query: 131 CGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSW 190
EG+Q+H + G N+++ L+N+Y C
Sbjct: 125 VKALAEGKQLHCFAVKLGVSDNMYVVPTLINMY--------TAC---------------- 160
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG 250
GDID + ++FD++ VV++ +I A+N ++ +AL+LF E++ +
Sbjct: 161 ----------GDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQEIGLK 210
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEE 310
V ++ LS+CA +G L LG+W+H YV++ + R V +N LI MYA CG +++
Sbjct: 211 PTDVTMLVVLSSCALLGSLDLGRWMHEYVKK-YGFDR---YVKVNTTLIDMYAKCGSLDD 266
Query: 311 AYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSH 355
A VFR M +R+T +W+++I +A G +A+ +TFLG+L ACSH
Sbjct: 267 AVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYACSH 326
Query: 356 GGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLG 415
G V+EG ++F M +GI P I+HYGCMVDL RAG +DEA+ + +P+KP +
Sbjct: 327 NGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWR 386
Query: 416 SLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIK 475
+LL C H N E+ +V +++ E+D Y+ + +N+ A +W DV +R+ MI
Sbjct: 387 TLLSACSTHGNVEMGKRVIERIF-ELDDSHGGDYV-IFSNLCARYGKWDDVNHLRKTMID 444
Query: 476 MGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELF 533
G K PG S +++N V+H+F AG+ + ++ +++ L E+ + GY PD S +F
Sbjct: 445 KGAVKIPGCSSIEVNNVVHEFFAGEGVHSTSTTLHRALDELVKELKSAGYVPDTSLVF 502
>gi|357150678|ref|XP_003575540.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 491
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 166/434 (38%), Positives = 240/434 (55%), Gaps = 37/434 (8%)
Query: 124 LLSVCARCGLF----REGEQVHGRVLASGY---CSNVFIRTNLMNLYLMSGGECGVGCAR 176
L+ A CG E EQ+H ++ SG S V+ T+L +Y G + AR
Sbjct: 67 LMPALAACGRLLTAAAEAEQIHTLLVKSGLPRSVSGVYASTSLARVYARHGR---LADAR 123
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
+FD MP +VVSWN LL G+V+ GD+D AW++F EM RNVVSW T++ G A+ G++++
Sbjct: 124 KVFDGMPETTVVSWNVLLDGFVRAGDLDAAWELFVEMTERNVVSWNTVMVGFARLGRAQE 183
Query: 237 ALSLFNEMRRARVGL--DQVALVAALSACAEIGDLKLGKWIHSYV-EENFSVGREPVLVS 293
A+ LF EM GL D+ +V +SA IG L LG+ H YV FS+ +
Sbjct: 184 AVELFVEMTTV-YGLVPDEATMVGFVSAVRNIGLLGLGRSAHGYVIRREFSLDG-----A 237
Query: 294 LNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------- 343
L LI+MY CG + AY F + +N WTS I GFA G+ AL
Sbjct: 238 LGVGLINMYTRCGSMTAAYLCFSSVTSKNVEHWTSAIGGFAAHGHPDMALRLFAEMRELG 297
Query: 344 -----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEA 398
+TF+ VL+ACSHGG VDEG ++F M + GI+P I+HYGC+VDL RAG ++EA
Sbjct: 298 IEPNDVTFVAVLNACSHGGLVDEGFKYFNMMRK-MGIRPSIQHYGCLVDLLGRAGFLEEA 356
Query: 399 FSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYA 458
F+L ++P P SLL C+ H N ++A AQKL A+ +P + Y+ L++N YA
Sbjct: 357 FNLASSLPKDPGFVTWSSLLAACQTHGNVDMAEVAAQKL-ADAEPNHGSSYV-LLSNAYA 414
Query: 459 AAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITM 518
A +W+D+ R +M K PG SW++++G +H F D ++ + IY+ L + +
Sbjct: 415 RAGQWEDLKRTRSRMEAHRAVKKPGLSWIEVDGSVHSFGTADKSHTENKGIYQMLENLKL 474
Query: 519 QAMQEGYKPDISEL 532
GY+P+ L
Sbjct: 475 NLTSAGYEPETFSL 488
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 97/249 (38%), Gaps = 44/249 (17%)
Query: 38 QIHSQIIINGFSQKN---YILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHA 94
QIH+ ++ +G + Y L Y G L +A KVF+ + WN ++ G
Sbjct: 86 QIHTLLVKSGLPRSVSGVYASTSLARVYARHGRLADARKVFDGMPETTVVSWNVLLDGFV 145
Query: 95 RSETPEKSVYLYKQMIDKET--------------------------------EPDEYTYS 122
R+ + + L+ +M ++ PDE T
Sbjct: 146 RAGDLDAAWELFVEMTERNVVSWNTVMVGFARLGRAQEAVELFVEMTTVYGLVPDEATMV 205
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDD 181
+S GL G HG V+ + + + L+N+Y CG + A L F
Sbjct: 206 GFVSAVRNIGLLGLGRSAHGYVIRREFSLDGALGVGLINMYT----RCGSMTAAYLCFSS 261
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP----HRNVVSWTTMISGCAQNGKSRQA 237
+ +++V W S + G+ G D A ++F EM N V++ +++ C+ G +
Sbjct: 262 VTSKNVEHWTSAIGGFAAHGHPDMALRLFAEMRELGIEPNDVTFVAVLNACSHGGLVDEG 321
Query: 238 LSLFNEMRR 246
FN MR+
Sbjct: 322 FKYFNMMRK 330
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 8/181 (4%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
H +I FS + L+ Y G + A+ F + + W I G A P
Sbjct: 224 HGYVIRREFSLDGALGVGLINMYTRCGSMTAAYLCFSSVTSKNVEHWTSAIGGFAAHGHP 283
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
+ ++ L+ +M + EP++ T+ +L+ C+ GL EG + + G ++ L
Sbjct: 284 DMALRLFAEMRELGIEPNDVTFVAVLNACSHGGLVDEGFKYFNMMRKMGIRPSIQHYGCL 343
Query: 160 MNLYLMSGG-ECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDID----GAWKIFDEMP 214
++L +G E A L D V+W+SLL G++D A K+ D P
Sbjct: 344 VDLLGRAGFLEEAFNLASSLPKD---PGFVTWSSLLAACQTHGNVDMAEVAAQKLADAEP 400
Query: 215 H 215
+
Sbjct: 401 N 401
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 160/514 (31%), Positives = 268/514 (52%), Gaps = 60/514 (11%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
I + NG +++ L+ YV L +AH++F++ + W MI +++ +
Sbjct: 83 ICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKI 142
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
+K++ L M+ P+ YTYS SV C + +H ++ G S+VF+R+
Sbjct: 143 HQKALELLVLMLRDNVRPNVYTYS---SVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSA 199
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
L++++ K G+ + A +FDEM +
Sbjct: 200 LIDVF----------------------------------AKLGEPEDALSVFDEMVTGDA 225
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
+ W ++I G AQN +S AL LF M+RA +Q L + L AC + L+LG H +
Sbjct: 226 IVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVH 285
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ V + L+ LNNAL+ MY CG +E+A VF +M+ R+ ++W++MI+G A+ GY
Sbjct: 286 I-----VKYDQDLI-LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGY 339
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
+QEAL +T +GVL ACSH G +++G +F M + +GI P EHYG
Sbjct: 340 SQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYG 399
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
CM+DL +AG +D+A L+ M +P+ +LL CR+ N LA A+K++A +DP
Sbjct: 400 CMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIA-LDP 458
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
E A Y L++N+YA +++W V +R +M G++K PG SW+++N +H F+ GD+++
Sbjct: 459 EDAGTY-TLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSH 517
Query: 504 KQASLIYKTLGEITMQAMQEGYKPDISELFLGIE 537
Q + K L ++ + GY P+ + + +E
Sbjct: 518 PQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLE 551
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 135/307 (43%), Gaps = 40/307 (13%)
Query: 25 SLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTA 84
S+L+ N + +H II G ++ + L+ + G +A VF++
Sbjct: 167 SVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAI 226
Query: 85 IWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRV 144
+WN +I G A++ + ++ L+K+M ++ T + +L C L G Q H +
Sbjct: 227 VWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHI 286
Query: 145 LASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDID 204
+ Y ++ + L+++Y G + A +F+ M R V++W++++ G
Sbjct: 287 VK--YDQDLILNNALVDMYCKCG---SLEDALRVFNQMKERDVITWSTMISGL------- 334
Query: 205 GAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACA 264
AQNG S++AL LF M+ + + + +V L AC+
Sbjct: 335 ------------------------AQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACS 370
Query: 265 EIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNT 323
G L+ G + +++ + G +PV +I + G++++A + +M+ +
Sbjct: 371 HAGLLEDGWYYFRSMKKLY--GIDPVREHY-GCMIDLLGKAGKLDDAVKLLNEMECEPDA 427
Query: 324 VSWTSMI 330
V+W +++
Sbjct: 428 VTWRTLL 434
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 190/609 (31%), Positives = 298/609 (48%), Gaps = 95/609 (15%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQ---IHSQIIINGFSQKN-YILAKLLAFYVTSGYLINAHK 73
LT+ Q +LLQ TK+ Q +H+ +I + N Y+ KL AFY G + A
Sbjct: 57 LTSLQCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEV 116
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSF---------- 123
+F+ ++ +WN MIRG+A + P KS+ LY++M+ D +TY F
Sbjct: 117 IFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLL 176
Query: 124 -------------------------LLSVCARCGLFREGEQVHGRV----------LASG 148
LL++ A+ G V R+ + SG
Sbjct: 177 VEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISG 236
Query: 149 YCSNVFIRTNLMNLYLMSGGECGVGCARLL-----FDDMPA-------------RSVVSW 190
Y N T + LM C LL D+ A S+ ++
Sbjct: 237 YAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNY 296
Query: 191 N-----SLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
N SL++ Y + A ++F+ + ++ VSW +MI G A+NG + ++L LF M
Sbjct: 297 NKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMA 356
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSY-VEENFSVGREPVLVSLNNALIHMYAS 304
G DQV +A L AC +I L+ G IHSY V++ F + AL+ MY+
Sbjct: 357 LDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDAN-----TIVGTALVDMYSK 411
Query: 305 CGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALL---------------TFLGV 349
CG + + VF +M ++ VSW++M+ G+ G +EA+ F +
Sbjct: 412 CGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSI 471
Query: 350 LSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKP 409
LSACSH G V EG++ F M + + +KP + HY CMVDL RAG +DEA+ +++ M +KP
Sbjct: 472 LSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKP 531
Query: 410 NDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAV 469
+ +LL R+H N +LA AQK V +++P+ + Y+ L +N+YAA KRW DV V
Sbjct: 532 TSDIWAALLTASRLHKNIKLAEISAQK-VFDMNPKVVSSYICL-SNIYAAEKRWDDVERV 589
Query: 470 RQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDI 529
R + + G++K PG S+++++ ++H F+ GD +++Q IY L E+ Q + GYKPD
Sbjct: 590 RAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQQLKEAGYKPDT 649
Query: 530 SELFLGIEE 538
S +F +EE
Sbjct: 650 SLVFYDVEE 658
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/512 (31%), Positives = 268/512 (52%), Gaps = 56/512 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H +++++G + KL+ Y G + +A ++F+ + +WN +IR +AR
Sbjct: 83 QLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPKRNVFLWNVLIRAYARDG 142
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E ++ LY+ M+D EPD +TY L CA G +VH RVL + + ++F+
Sbjct: 143 PHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTHWGEDMFVCA 202
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y +CG +D A +FD + R+
Sbjct: 203 GLVDMY----AKCGC------------------------------VDDARAVFDRIRVRD 228
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
V W +MI+ QNG+ +ALSL +M VG LV+ +SA A+ L G+ +H
Sbjct: 229 SVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHG 288
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
+ R+ L +L+ MYA G ++ A +F ++ +R VSW +MI G+ G
Sbjct: 289 FGWRR-GFDRQD---KLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHG 344
Query: 338 YAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
+ EAL +TF+GVLSAC+HGG V E ++FF M + IKP ++H
Sbjct: 345 HFDEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQH 404
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
+ C+VD+ AG +EA+ L++ MPM+P+ + G+LL GC+IH N EL QKL+ E+
Sbjct: 405 FTCLVDVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLI-EL 463
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+PE A Y+ L++N+YA + +W+ A VR+ M G++K G SW+++ G H F+ GD+
Sbjct: 464 EPEDAGNYV-LLSNIYAQSGKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDA 522
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELF 533
++ +++ IY+ L + GY PD +F
Sbjct: 523 SHPRSAEIYEELERLEGLMSDAGYMPDTMPVF 554
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 173/517 (33%), Positives = 268/517 (51%), Gaps = 58/517 (11%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
IH+ ++ + F + LL Y G L+ A K+F++ + W +I G+++ +
Sbjct: 37 IHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDR 96
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGL--FREGEQVHGRVLASGYCSNVFIR 156
P+ ++ L +M+ +P+++T + LL + G +G Q+HG L GY SNV+
Sbjct: 97 PQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVY-- 154
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
V CA L DM AR ++ A IFD M +
Sbjct: 155 ---------------VSCAIL---DMYARC--------------HHLEEAQLIFDVMVSK 182
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
N VSW +I+G A+ G+ +A LF+ M R V + L ACA +G L+ GKW+H
Sbjct: 183 NEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVH 242
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+ + + E ++ + N L+ MYA G IE+A VF ++ +R+ VSW SM+TG+++
Sbjct: 243 ALMIK----WGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQH 298
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G + AL +TFL VL+ACSH G +DEGR +F+ M + + ++P+I H
Sbjct: 299 GLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKK-YNVEPQISH 357
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
Y MVDL RAG +D A + MP+KP AV G+LL CR+H N EL A+ + E+
Sbjct: 358 YVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNMELGGYAAE-CIFEL 416
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
D G L+ N+YA A RW D A VR+ M + GV+K P SWV++ +H FVA D
Sbjct: 417 D-SHYPGTHVLLYNIYALAGRWNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDD 475
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ Q I+ +I+ + + GY PD S + L +++
Sbjct: 476 AHPQRREIHNMWEQISDKIKEIGYVPDSSHVLLCMDQ 512
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 132/314 (42%), Gaps = 45/314 (14%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H + G+ Y+ +L Y +L A +F+ + + WN +I G+AR
Sbjct: 139 QLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKG 198
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+K+ L+ M+ + +P +TYS +L CA G +G+ VH ++ G F+
Sbjct: 199 QGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGN 258
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y SG + A+ +FD + R VVSWNS+L GY
Sbjct: 259 TLLDMYAKSG---SIEDAKKVFDRLAKRDVVSWNSMLTGY-------------------- 295
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+Q+G + AL F EM R R+ + + + L+AC+ G L G+
Sbjct: 296 -----------SQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGR---H 341
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ- 336
Y + EP +S ++ + G ++ A +M + T + + G +
Sbjct: 342 YFDMMKKYNVEPQ-ISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMH 400
Query: 337 ------GYAQEALL 344
GYA E +
Sbjct: 401 KNMELGGYAAECIF 414
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 159/354 (44%), Gaps = 60/354 (16%)
Query: 124 LLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDM 182
LL C EG+ +H +L S + ++ ++ L+NLY +CG + AR LFD+M
Sbjct: 21 LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLY----AKCGDLVYARKLFDEM 76
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
+R VV+W +L+ GY +Q+ + + AL L
Sbjct: 77 SSRDVVTWTALITGY-------------------------------SQHDRPQDALLLLP 105
Query: 243 EMRRARVGLDQVALVAALSACAEIG--DLKLGKWIHSYVEENFSVGREPVLVSLNNALIH 300
EM R + +Q L + L A + +G D+ G+ +H G + V ++ A++
Sbjct: 106 EMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLC---LRYGYDSN-VYVSCAILD 161
Query: 301 MYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LT 345
MYA C +EEA +F M +N VSW ++I G+A++G +A T
Sbjct: 162 MYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFT 221
Query: 346 FLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
+ VL AC+ G +++G+ M + WG K ++D+++++G +++A + +
Sbjct: 222 YSSVLCACASMGSLEQGKWVHALMIK-WGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRL 280
Query: 406 PMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV-AEIDPEQAAGYLALVANVYA 458
K + S+L G H ++A Q ++++ I P L A +A
Sbjct: 281 A-KRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHA 333
>gi|356544269|ref|XP_003540576.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 522
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 173/517 (33%), Positives = 278/517 (53%), Gaps = 34/517 (6%)
Query: 20 TRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTE 79
+R + LL+ ++ + + QIH I +G ++ +I +KLLAFY S L AH +F
Sbjct: 4 SRCVVGLLEQCSSMREMKQIHGHAITHGLARFAFISSKLLAFYARSD-LRYAHTLFSHIP 62
Query: 80 NPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
P+ +N +I +P S + QM++ P+ T+S LLS + F Q
Sbjct: 63 FPNLFDYNTIITAF----SPHYSSLFFIQMLNAAVSPNSRTFSLLLSKSSPSLPFLH--Q 116
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVK 199
+H ++ G+ S+ ++ T+L+ Y G AR LFD P ++V W SL+ GY
Sbjct: 117 LHSHIIRRGHVSDFYVITSLLAAYSNHGS---TRAARRLFDQSPYKNVACWTSLVTGYCN 173
Query: 200 RGDIDGAWKIFDEMPHR--NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
G ++ A +FD +P R N VS++ M+SG +NG R+ + LF E++ V + L
Sbjct: 174 NGLVNDARNLFDAIPERERNDVSYSAMVSGYVKNGCFREGIQLFRELKDRNVKPNNSLLA 233
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
+ LSACA +G + GKWIH+YV++N S + L ALI Y CG +E A VF
Sbjct: 234 SVLSACASVGAFEEGKWIHAYVDQNKSQCYYEL--ELGTALIDFYTKCGCVEPAQRVFGN 291
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEG 362
M+ ++ +W++M+ G A QEAL +TF+GVL+AC+H E
Sbjct: 292 MKTKDVAAWSAMVLGLAINAKNQEALELFEEMEKVGPRPNAVTFIGVLTACNHKDLFGEA 351
Query: 363 RQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCR 422
+ F M+ +GI IEHYGC+VD+ +R+G ++EA +++M ++P+ + GSLL GC
Sbjct: 352 LKLFGYMSDKYGIVASIEHYGCVVDVLARSGKIEEALEFIKSMEVEPDGVIWGSLLNGCF 411
Query: 423 IHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPP 482
+HNN EL +V + LV E++P Y+ L++NVYA +W+ V R+ M GV
Sbjct: 412 LHNNIELGHKVGKYLV-ELEPGHGGRYV-LLSNVYATMGKWEAVLETRKFMKDRGVPAVS 469
Query: 483 GQSWVQINGVLHDFVAGDSTYKQASL---IYKTLGEI 516
G S+++I+ +H F+ D+ + S +Y+ L +
Sbjct: 470 GSSFIEIHQTVHKFLVHDNNHHCGSYPAEVYRVLNHL 506
>gi|296081956|emb|CBI20961.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 157/506 (31%), Positives = 276/506 (54%), Gaps = 62/506 (12%)
Query: 36 LFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHAR 95
L +IH+ I+ SQ ++++ K++ G A+ +F+ +P+ ++N MIR +
Sbjct: 75 LKKIHAHIVKFSLSQSSFLVTKMVDVCNHYGETEYANLLFKGVADPNAFLYNAMIRAYKH 134
Query: 96 SETPEKSVYLYKQMI-----DKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYC 150
++ ++ +YKQM+ + PD++T+ F++ CA + G+QVHG V G
Sbjct: 135 NKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQK 194
Query: 151 SNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIF 210
SN + NSL++ YVK +D A ++F
Sbjct: 195 SNTVVE----------------------------------NSLVEMYVKCDSLDDAHRVF 220
Query: 211 DEMPHRN--VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGD 268
+EM R+ + SWT ++SG A+ G AL F M+ + D+++LV+ L CA++G
Sbjct: 221 EEMTERDATIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGA 280
Query: 269 LKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTS 328
L+LGKWIH Y ++ + + + NALI MYA CG I++ +F +M+ R+ +SW++
Sbjct: 281 LELGKWIHIYADKAGFLRN----ICVCNALIEMYAKCGSIDQGRRLFDQMKERDVISWST 336
Query: 329 MITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNW 373
MI G A G A+EA+ +TF+G+L+AC+H G ++EG ++FE M +++
Sbjct: 337 MIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAGLLNEGLRYFESMKRDY 396
Query: 374 GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQV 433
I+P +EHYGC+V+L +G +D+A LV+ MP KP+ + GSLL CR H N ++A +
Sbjct: 397 NIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGSLLSSCRSHGNLKIAV-I 455
Query: 434 AQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVL 493
A + + E++P Y+ L++N+YA +W V+ +R+ M ++K PG S ++++ ++
Sbjct: 456 AMEHLLELEPADTGNYV-LLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSSIEVDNMV 514
Query: 494 HDFVAGDSTYKQASLIYKTLGEITMQ 519
+F +GD + + I + L + M
Sbjct: 515 QEFASGDDSKPFSKAICRVLKLLVMH 540
>gi|222636196|gb|EEE66328.1| hypothetical protein OsJ_22569 [Oryza sativa Japonica Group]
Length = 1287
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 159/490 (32%), Positives = 270/490 (55%), Gaps = 27/490 (5%)
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
G L +A + + W +I ++R++ +++V +K M+ + PD+ T +L
Sbjct: 126 GMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVL 185
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDM-P 183
S C++ G +H V G + + L+++Y +CG G AR +FD +
Sbjct: 186 SACSQLKDLELGCSLHLLVKEKGMSMSENLVVALIDMY----AKCGDFGHAREVFDAVGR 241
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
R SWN+++ GY K G +D A +FD+M R+++++ +MI+G +G+ R+AL LF
Sbjct: 242 GRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMN 301
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
MRR + +D +V+ LSACA +G L G+ +H+ +E + + AL+ MY
Sbjct: 302 MRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRLV----ETDIYIGTALLDMYM 357
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLG 348
CG + EA VF++M +R+ +WT+MI G A G + L ++++
Sbjct: 358 KCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIA 417
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
VL+ACSH ++EGR +F+ M + I P+IEHYGCM+DL R+GL+DEA LV+ MPM+
Sbjct: 418 VLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQ 477
Query: 409 PNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAA 468
PN + S+L CR+H +LA A+ L+ +I+P++ A Y+ L N+ +++W+D +
Sbjct: 478 PNSVIWASILSACRVHKRIDLAQCAAEHLL-KIEPDEDAVYVQLY-NICIDSRKWEDASK 535
Query: 469 VRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
+R M + V+K G S V + G +H FV D ++ + I L EI+ + GY P
Sbjct: 536 IRMLMEERQVKKTAGYSSVTVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSAGYSPI 595
Query: 529 ISELFLGIEE 538
S++ + ++E
Sbjct: 596 TSQVTVDVDE 605
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 177/379 (46%), Gaps = 65/379 (17%)
Query: 82 STAIWNQMIRGHARSET----PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE- 136
ST +++ +R R+ T P+ L+++M PD +T+ FL C+ R
Sbjct: 4 STFLFDTALRACFRAGTSSGDPDIPFVLFRRMRRAAVRPDGFTFHFLFK-CSSSSRPRAL 62
Query: 137 -GEQVHGRVLASGYCSNV-FIRTNLMNLYLMSGGECGV-GCARLLFDDMPARSVVSWNSL 193
+H L + S F+ +L+++Y E G+ G R FD++P + VSW +
Sbjct: 63 LCTMLHAACLRTMLPSAAPFVANSLIHMY----TELGLAGDVRRAFDEIPVKDAVSWTMV 118
Query: 194 LKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQ 253
+ G K G + A + + P R+V+SWT++I+ ++ ++++A+ F M + D
Sbjct: 119 ISGLAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDD 178
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGE------ 307
V ++ LSAC+++ DL+LG +H V+E E ++V ALI MYA CG+
Sbjct: 179 VTVIGVLSACSQLKDLELGCSLHLLVKEKGMSMSENLVV----ALIDMYAKCGDFGHARE 234
Query: 308 --------------------------IEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQE 341
++ A +F +M+ R+ +++ SMITG+ G +E
Sbjct: 235 VFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLRE 294
Query: 342 ALLTFL---------------GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMV 386
ALL F+ +LSAC+ G + +GR C+ ++ I ++
Sbjct: 295 ALLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRL-VETDIYIGTALL 353
Query: 387 DLFSRAGLMDEAFSLVQNM 405
D++ + G ++EA + Q M
Sbjct: 354 DMYMKCGRVNEATIVFQRM 372
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 185/419 (44%), Gaps = 55/419 (13%)
Query: 38 QIHSQIIINGFSQKNYILAK-LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
Q+H ++ G+ N L+ L+ Y G ++ K + WN ++ +A
Sbjct: 854 QLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNSILSMYADR 913
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGY-CSNVFI 155
+++VY KQM+ P ++ LL++ + G ++ G Q+HG V G+ CS+V +
Sbjct: 914 GHMKEAVYYLKQMLWHGKMPSVRSFVSLLALSGKTGDWQLGVQIHGIVHKLGFSCSSVHV 973
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
+T L+++Y G C + +F+++P+ ++ NSL+ + D A +I M
Sbjct: 974 QTTLIDMY---GKCCCFDHSLAIFNEIPSIALECCNSLITSSLGCNMFDAALEILHCMIV 1030
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
V S + +A+SL + +L++C + +
Sbjct: 1031 EGVTPDDVTFSA------TMKAISL--------------SASPSLTSC---------QML 1061
Query: 276 HS-YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
HS V+ F + +++ ++LI YA G++ ++ +F + N + +T++I+ A
Sbjct: 1062 HSCLVKLGFEMD-----MAVCSSLITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACA 1116
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
+ G A+ +TFL ++ C G +EGR E M + + P
Sbjct: 1117 RYGDGARAMELFDQMVSSGLKPDNVTFLCAIAGCDQAGMFEEGRLVIELMRASRELDPDE 1176
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
H+ CMV+L SR G + EA +++ P++ SLL C+ H L + A L+
Sbjct: 1177 RHFACMVNLLSRDGFVKEAMEMMEQSPLRHYTKAWSSLLQSCKAHGENVLGKRAANMLI 1235
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 118/262 (45%), Gaps = 42/262 (16%)
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHG 142
A N+MI G R +++ +Y+ M+ +T+S +L VC+ E Q+HG
Sbjct: 700 VASLNRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCST----YEALQLHG 755
Query: 143 RVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGD 202
RVLA G C N F+ + L+N Y+ +V+
Sbjct: 756 RVLALGLCCNPFVGSALVNHYM--------------------------------HVESP- 782
Query: 203 IDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSA 262
A +F E+P +N ++ G + + + F +MRR + L+ ++ A+
Sbjct: 783 -HAALSLFRELPLQNTAMCNVVLRGLGNLKLTEELICCFLDMRRQYLELNGLSYCYAMKG 841
Query: 263 CAEIGD-LKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR 321
C + G+ L+ G+ +H V G P + L+N+L+ +Y++ G+ + +
Sbjct: 842 CYQNGEWLEQGRQLHGVV---LKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSE 898
Query: 322 NTVSWTSMITGFAKQGYAQEAL 343
+ +SW S+++ +A +G+ +EA+
Sbjct: 899 DVISWNSILSMYADRGHMKEAV 920
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 116/273 (42%), Gaps = 40/273 (14%)
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
Y G++ A +F++ E +N MI G+ S +++ L+ M + D +T
Sbjct: 255 YCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVDNFTV 314
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFD 180
LLS CA G +G +H + ++++I T L+++Y+ +CG V A ++F
Sbjct: 315 VSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYM----KCGRVNEATIVFQ 370
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSL 240
M R V +W T MI+G A NG + L
Sbjct: 371 RMGKRDVHAW-------------------------------TAMIAGLAFNGMGKAGLEY 399
Query: 241 FNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIH 300
F +MR + V+ +A L+AC+ L G+ + +++ + + +I
Sbjct: 400 FYQMRCDGFQPNPVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQ---IEHYGCMID 456
Query: 301 MYASCGEIEEAYGVFRKM-QRRNTVSWTSMITG 332
+ G ++EA + + M + N+V W S+++
Sbjct: 457 LLGRSGLLDEAMDLVKTMPMQPNSVIWASILSA 489
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 9/142 (6%)
Query: 1 MLVEEIIPANPATSS--KALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKL 58
M+VE + P + S+ KA++ SL + +HS ++ GF + + L
Sbjct: 1028 MIVEGVTPDDVTFSATMKAISLSASPSLTSCQ-------MLHSCLVKLGFEMDMAVCSSL 1080
Query: 59 LAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDE 118
+ Y +G L ++H +FE +P+ + +I AR +++ L+ QM+ +PD
Sbjct: 1081 ITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELFDQMVSSGLKPDN 1140
Query: 119 YTYSFLLSVCARCGLFREGEQV 140
T+ ++ C + G+F EG V
Sbjct: 1141 VTFLCAIAGCDQAGMFEEGRLV 1162
>gi|357123975|ref|XP_003563682.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Brachypodium distachyon]
Length = 527
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 166/479 (34%), Positives = 257/479 (53%), Gaps = 44/479 (9%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+ H+ + GF Y + L+ Y G A K+F++ + + +WN MIR + R
Sbjct: 67 KAHAAAMKTGFWWDAYTASSLMDMYTLLGRADVARKLFDEMPHRALVVWNMMIRCYVRCG 126
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVF--- 154
++ L ++M PD+ T ++VC+R G G ++H Y VF
Sbjct: 127 RYTAAIALAEEMERSGLTPDKVTLVTSVTVCSRAGDLSLGRRIHA------YMDGVFGFS 180
Query: 155 --IRTNLMNLYLMSGGECGVGC---ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKI 209
+ L+++Y+ +G C A LF+ MP+R+++SW L+ GY G +D A +
Sbjct: 181 LPVANALLDMYMKNG------CLEEAVKLFEQMPSRNIISWTILVSGYAFAGQLDKARVL 234
Query: 210 FDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDL 269
F + ++++ WT MI+ C Q+G +ALSLF EM+ RV D+ +V L+ CA +G L
Sbjct: 235 FYQCSEKDLIMWTAMINACVQHGCFEEALSLFREMQMQRVEPDRFTIVTLLTCCANLGAL 294
Query: 270 KLGKWIHSYVEENFSVGRE-PVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTS 328
G+WIH F+V R+ V L ALI MYA CG ++++ VF +MQ R+T +WTS
Sbjct: 295 DQGEWIH-----QFAVDRKMKVDAVLGTALIDMYAKCGHVKKSMEVFEQMQGRDTTAWTS 349
Query: 329 MITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNW 373
+I G A G A AL +TF+GVLSAC HGG VDEGR+ F M +
Sbjct: 350 IICGLATNGQAGRALELFEDMERSKVKPDSITFIGVLSACCHGGLVDEGRKQFHAMKDVY 409
Query: 374 GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM-KPNDAVLGSLLLGCRIHNNAELASQ 432
I PRIEHY C+V+L RAGL+DEA L++++ + K + G+LL C+ N E++ +
Sbjct: 410 RIPPRIEHYSCLVNLLGRAGLLDEAEKLIRDIQINKDAMPLFGALLTACKAQGNVEMSER 469
Query: 433 VAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQING 491
+ +++ + Q L++NVYA A RW+D VR KM ++K G S +++ G
Sbjct: 470 LTKRIGEQ--GYQIPDVNLLMSNVYATASRWEDAIRVRSKMAHPTIKKTAGCSLIEVKG 526
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 164/349 (46%), Gaps = 59/349 (16%)
Query: 87 NQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLA 146
N +IR AR + + + +Y + + D +TY F+L L EG + H +
Sbjct: 15 NLLIRTLARRGSFARVMAVYYDLRGRGLVADSFTYPFVLRAIGVLKLSVEGRKAHAAAMK 74
Query: 147 SGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGA 206
+G+ + + ++LM++Y + G AR LFD+MP R++V WN +++ YV+
Sbjct: 75 TGFWWDAYTASSLMDMYTLLG---RADVARKLFDEMPHRALVVWNMMIRCYVR------- 124
Query: 207 WKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEI 266
G+ A++L EM R+ + D+V LV +++ C+
Sbjct: 125 ------------------------CGRYTAAIALAEEMERSGLTPDKVTLVTSVTVCSRA 160
Query: 267 GDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSW 326
GDL LG+ IH+Y++ F + + NAL+ MY G +EEA +F +M RN +SW
Sbjct: 161 GDLSLGRRIHAYMDGVFGFS-----LPVANALLDMYMKNGCLEEAVKLFEQMPSRNIISW 215
Query: 327 TSMITGFAKQGYAQEA-----------LLTFLGVLSACSHGGFVDEGRQFFECMNQNWGI 375
T +++G+A G +A L+ + +++AC G +E F M Q +
Sbjct: 216 TILVSGYAFAGQLDKARVLFYQCSEKDLIMWTAMINACVQHGCFEEALSLFREM-QMQRV 274
Query: 376 KPRIEHYGCMVDLFSRAGLMDEA-----FSLVQNMPMKPNDAVLGSLLL 419
+P ++ + G +D+ F++ + M + DAVLG+ L+
Sbjct: 275 EPDRFTIVTLLTCCANLGALDQGEWIHQFAVDRKMKV---DAVLGTALI 320
>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 621
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 175/534 (32%), Positives = 286/534 (53%), Gaps = 38/534 (7%)
Query: 27 LQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIW 86
LQ+R + + ++H+ +GF I ++L Y+ L+NA ++F++ W
Sbjct: 100 LQLRALDEGM-KVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRLFDEMAERDLCSW 158
Query: 87 NQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR-------CGLFREGEQ 139
N MI G+A++ +++ L+ QM TE D ++++ + S R LFR Q
Sbjct: 159 NIMISGYAKAGRLQEARKLFDQM----TERDNFSWTAMTSGYVRHDQHEEALELFR-AMQ 213
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVK 199
H + + + + + L G E R+ D V W++L Y K
Sbjct: 214 RHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIGLD----LDGVVWSALSDMYGK 269
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
G I A IFD+ R+VVSWT MI + G+ + +LF+++ ++ + ++
Sbjct: 270 CGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGIWPNEFTFSGV 329
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
L+ACA+ +LGK +H Y+ +G +P + + L+HMY CG I+ A VF M
Sbjct: 330 LNACADHAAEELGKQVHGYMTR---IGFDPSSFAAST-LVHMYTKCGNIKNARRVFNGMP 385
Query: 320 RRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQ 364
R + VSWTS+I+G+A+ G EAL +TF+GVLSAC+H G VD+G +
Sbjct: 386 RPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLE 445
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
+F+ + + G+ +HY C++DL SR+G + EA ++ MP++P+ + SLL GCRIH
Sbjct: 446 YFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGGCRIH 505
Query: 425 NNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQ 484
N +LA + A+ L EI+PE A Y L AN+YA A W VA VR+ M GV K PG
Sbjct: 506 GNLKLAKRAAEALF-EIEPENPATYTTL-ANIYATAGLWGGVAEVRKVMDARGVVKKPGL 563
Query: 485 SWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
SW++I +H F+ GD+++ ++ I++ LG+++ + +EGY PD + + +EE
Sbjct: 564 SWIEIKREVHVFLVGDTSHAKSKEIHEFLGKLSKRMKEEGYVPDTNFVLHDVEE 617
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 161/329 (48%), Gaps = 25/329 (7%)
Query: 108 QMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSG 167
Q++D P TYS LL +C + EG +VH SG+ V I ++++Y+
Sbjct: 79 QILDHVDRPSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCN 138
Query: 168 GECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISG 227
A+ LFD+M R + SWN ++ GY K G + A K+FD+M R+ SWT M SG
Sbjct: 139 SLVN---AKRLFDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTERDNFSWTAMTSG 195
Query: 228 CAQNGKSRQALSLFNEMRR-ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVG 286
++ + +AL LF M+R ++ + +AL+A A I L LGK IH ++ +G
Sbjct: 196 YVRHDQHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHI---LRIG 252
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--- 343
+ V + +AL MY CG I EA +F K R+ VSWT+MI + K+G +E
Sbjct: 253 LDLDGV-VWSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALF 311
Query: 344 ------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSR 391
TF GVL+AC+ + G+Q M + G P +V ++++
Sbjct: 312 SDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTR-IGFDPSSFAASTLVHMYTK 370
Query: 392 AGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
G + A + MP +P+ SL+ G
Sbjct: 371 CGNIKNARRVFNGMP-RPDLVSWTSLISG 398
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 169/555 (30%), Positives = 283/555 (50%), Gaps = 63/555 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEK-------------------- 77
QIH ++G ++ + Y+ G + +A KVF++
Sbjct: 137 QIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKG 196
Query: 78 ---------TENPSTAI------WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYS 122
+E S+ I WN ++ G RS +++V +++++ PD+ T S
Sbjct: 197 CLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVS 256
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDM 182
+L + G +HG V+ G + + + ++++Y SG G+ LF+
Sbjct: 257 SVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIIS---LFNQF 313
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR----NVVSWTTMISGCAQNGKSRQAL 238
N+ + G + G +D A ++F+ + NVVSWT++I+GCAQNGK +AL
Sbjct: 314 EMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEAL 373
Query: 239 SLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNAL 298
LF EM+ A V + V + + L AC I L G+ H + + V + +AL
Sbjct: 374 ELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDN----VHVGSAL 429
Query: 299 IHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------------- 343
I MYA CG I + VF M +N V W S++ GF+ G A+E +
Sbjct: 430 IDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDF 489
Query: 344 LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQ 403
++F +LSAC G DEG ++F+ M++ +GIKPR+EHY CMV+L RAG + EA+ L++
Sbjct: 490 ISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIK 549
Query: 404 NMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRW 463
MP +P+ V G+LL CR+ NN +LA A+KL ++PE Y+ L++N+YAA W
Sbjct: 550 EMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLF-HLEPENPGTYV-LLSNIYAAKGMW 607
Query: 464 QDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQE 523
+V ++R KM +G++K PG SW+Q+ ++ +AGD ++ Q I + + EI+ + +
Sbjct: 608 TEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKS 667
Query: 524 GYKPDISELFLGIEE 538
G++P++ +EE
Sbjct: 668 GHRPNLDFALHDVEE 682
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 170/360 (47%), Gaps = 29/360 (8%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q H++I+ +G YI AKL+A Y +A V + +P+ ++ +I +++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+S+ ++ +M PD + L VCA F+ G+Q+H SG + F++
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP-- 214
++ ++Y+ CG +G AR +FD M + VV+ ++LL Y ++G ++ +I EM
Sbjct: 156 SMFHMYM----RCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 215 --HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
N+VSW ++SG ++G ++A+ +F ++ DQV + + L + + L +G
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271
Query: 273 KWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
+ IH YV + + + V+ +A+I MY G + +F + + + ITG
Sbjct: 272 RLIHGYVIKQGLLKDKCVI----SAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITG 327
Query: 333 FAKQGYAQEALLTF---------------LGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
++ G +AL F +++ C+ G E + F M Q G+KP
Sbjct: 328 LSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM-QVAGVKP 386
>gi|297824523|ref|XP_002880144.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325983|gb|EFH56403.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 555
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 173/551 (31%), Positives = 287/551 (52%), Gaps = 92/551 (16%)
Query: 54 ILAKLLAFYVTSGYLINAHKVFE-KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDK 112
I K L ++ + A K+F+ + + + N MI+ + + S Y+ + K
Sbjct: 12 IFTKFLVISASAVGIGYARKLFDQRPHREDSFLCNSMIKAYLETRHYNDSFAFYRDL-RK 70
Query: 113 ET--EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGEC 170
ET PD +T++ + C +G Q+H ++ SG+C+++++ T ++++Y G
Sbjct: 71 ETCLAPDNFTFTTMTKSCTLSMCVYQGLQLHSQIWRSGFCADMYVSTGVVDMYAKFGK-- 128
Query: 171 GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP---------------- 214
+GCAR +FD+MP RS VSW +L+ GYV+ G++D A K+FD+MP
Sbjct: 129 -MGCARNVFDEMPQRSEVSWTALICGYVRFGELDLASKLFDQMPQVKDVVIYNAMMDGFV 187
Query: 215 ----------------HRNVVSWTTMISG-C----------------------------- 228
H+ V++WTTMI G C
Sbjct: 188 KSGDMTSARRLFDEMTHKTVITWTTMIHGYCNSNDIDSARKLFDAMPERNLVSWNTMIGG 247
Query: 229 -AQNGKSRQALSLFNEMR-RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVG 286
QN + ++A+ LF EM+ + D V +++ L A ++ G L LG+W H +V+ ++
Sbjct: 248 YCQNKQPQEAIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRK-NLD 306
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--- 343
++ V + A++ MY+ CGEIE+A +F +M + SW +MI G+A G A AL
Sbjct: 307 KK---VKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNAHAALDLF 363
Query: 344 -----------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRA 392
+T L V+SAC+HGG V+EGR++F+ M + +G+ +IEHYGCMVDL RA
Sbjct: 364 LTMAKEEKPDEITMLAVISACNHGGLVEEGRKWFQMMRK-FGLNAKIEHYGCMVDLLGRA 422
Query: 393 GLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLAL 452
G + +A L+ NMP KPN +L S L C + + E A ++ +K V E++P+ Y+ L
Sbjct: 423 GNLKQAEHLITNMPFKPNGIILSSFLSACGQYKDIERAERILKKAV-ELEPQNDGNYV-L 480
Query: 453 VANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKT 512
+ N+YAA KRW D V+ M K +K G S ++IN ++ +F++GD+T+ I+
Sbjct: 481 LRNLYAADKRWDDFGMVKNMMRKNEAKKEVGCSLIEINYIVSEFISGDTTHPHRQSIHLV 540
Query: 513 LGEITMQAMQE 523
L ++ + +E
Sbjct: 541 LEKLLVHMKEE 551
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 170/521 (32%), Positives = 269/521 (51%), Gaps = 61/521 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYV---TSGYLINAHKVFEKTENPSTAIWNQMIRGHA 94
Q+HSQ I +G + + L+ Y G + A K+F++ + + W MI G+
Sbjct: 292 QLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYV 351
Query: 95 -RSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNV 153
+ E+++ L++ MI P+ +T+S L CA R GEQV + G+ S
Sbjct: 352 QKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSS-- 409
Query: 154 FIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
V C NSL+ Y + G ID A K FD +
Sbjct: 410 ------------------VNCVA--------------NSLISMYARSGRIDDARKAFDIL 437
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK 273
+N++S+ T+I A+N S +AL LFNE+ +G + LS A IG + G+
Sbjct: 438 FEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGE 497
Query: 274 WIHSYV-EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
IH+ V + + + S+ NALI MY+ CG IE A+ VF M+ RN +SWTS+ITG
Sbjct: 498 QIHARVIKSGLKLNQ-----SVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITG 552
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
FAK G+A +AL +T++ VLSACSH G V+EG + F+ M G+ P
Sbjct: 553 FAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIP 612
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
R+EHY C+VD+ R+G + EA + +MP K + V + L CR+H N EL A K+
Sbjct: 613 RMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAA-KM 671
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
+ E +P A Y+ L++N+YA+ +W +V+ +R+ M + + K G SWV++ +H F
Sbjct: 672 IIEQEPHDPAAYI-LLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFY 730
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
GD+++ +A+ IY L ++++ + GY P++ + +EE
Sbjct: 731 VGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEE 771
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 193/430 (44%), Gaps = 55/430 (12%)
Query: 43 IIINGFSQKNYILA-KLLAFYVTS-GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPE 100
+I G+ Q + + L+ +V G L++A KVFEK + W MI +
Sbjct: 194 VIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAG 253
Query: 101 KSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLM 160
+++ L+ MI EPD +T S ++S CA L G+Q+H + + G + + L+
Sbjct: 254 EAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLI 313
Query: 161 NLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVS 220
N+Y + + AR +FD + +V SW +++ GYV++G
Sbjct: 314 NMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKG------------------- 354
Query: 221 WTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY-V 279
G +AL LF M V + + L ACA + L++G+ + ++ V
Sbjct: 355 -----------GYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAV 403
Query: 280 EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYA 339
+ FS + + N+LI MYA G I++A F + +N +S+ ++I +AK +
Sbjct: 404 KLGFS-----SVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNS 458
Query: 340 QEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGC 384
+EAL TF +LS + G + +G Q + ++ G+K
Sbjct: 459 EEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKS-GLKLNQSVCNA 517
Query: 385 MVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPE 444
++ ++SR G ++ AF + ++M + N S++ G H A A ++ K++ E
Sbjct: 518 LISMYSRCGNIESAFQVFEDMEDR-NVISWTSIITGFAKHGFATQALELFHKMLEEGVRP 576
Query: 445 QAAGYLALVA 454
Y+A+++
Sbjct: 577 NEVTYIAVLS 586
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 169/385 (43%), Gaps = 67/385 (17%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI-WNQMIRGHARSE 97
+H ++ + + L L++ Y G A +F + I W+ M+ A +
Sbjct: 88 VHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNN 147
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ + MI+ P+EY ++ C+ G+ + G V+ +GY +
Sbjct: 148 MGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQS----- 202
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
+ VGC + DM +KG RGD+ A+K+F++MP RN
Sbjct: 203 -----------DVCVGCGLI---DM----------FVKG---RGDLVSAFKVFEKMPERN 235
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
V+WT MI+ Q G + +A+ LF +M + D+ L +SACA + L LG+ +HS
Sbjct: 236 AVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHS 295
Query: 278 Y-VEENFSVGREPVLVSLNNALIHMYASC---GEIEEAYGVFRKMQRRNTVSWTSMITGF 333
+ ++ R + LI+MYA C G + A +F ++ N SWT+MITG+
Sbjct: 296 QAIRHGLTLDR-----CVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGY 350
Query: 334 A-KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
K GY +EAL TF L AC++ + G Q F +K
Sbjct: 351 VQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVF-----THAVKL 405
Query: 378 RIEHYGC----MVDLFSRAGLMDEA 398
C ++ +++R+G +D+A
Sbjct: 406 GFSSVNCVANSLISMYARSGRIDDA 430
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 122/249 (48%), Gaps = 16/249 (6%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
M++ +IP N T S L + L+I Q+ + + GFS N + L++
Sbjct: 367 MILTHVIP-NHFTFSSTLKACANLAALRIGE------QVFTHAVKLGFSSVNCVANSLIS 419
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y SG + +A K F+ + +N +I +A++ E+++ L+ ++ D+ +T
Sbjct: 420 MYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFT 479
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLF 179
++ LLS A G +GEQ+H RV+ SG N + L+++Y CG + A +F
Sbjct: 480 FASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMY----SRCGNIESAFQVF 535
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV----VSWTTMISGCAQNGKSR 235
+DM R+V+SW S++ G+ K G A ++F +M V V++ ++S C+ G
Sbjct: 536 EDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVN 595
Query: 236 QALSLFNEM 244
+ F M
Sbjct: 596 EGWKHFKSM 604
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 118/283 (41%), Gaps = 54/283 (19%)
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
K++ + M+ + + PD TYS L C R F G VH ++ S
Sbjct: 48 HKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQS------------ 95
Query: 160 MNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM-PHRNV 218
+L L S V+ NSL+ Y K G + A IF M R++
Sbjct: 96 -DLQLDS---------------------VTLNSLISLYSKCGQWEKATSIFRLMGSSRDL 133
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
+SW+ M+S A N +AL F +M ++ AA AC+ + +G I +
Sbjct: 134 ISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGF 193
Query: 279 VEENFSVGREPVLVSLNNALIHMYASC-GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
V G V + LI M+ G++ A+ VF KM RN V+WT MIT + G
Sbjct: 194 V---IKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFG 250
Query: 338 YAQEALLTFL---------------GVLSACSHGGFVDEGRQF 365
YA EA+ FL GV+SAC++ + G+Q
Sbjct: 251 YAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQL 293
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 169/532 (31%), Positives = 275/532 (51%), Gaps = 59/532 (11%)
Query: 25 SLLQ---IRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENP 81
SLLQ +R + Q+H++I G S + KL+ Y L NAH +F++
Sbjct: 6 SLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKR 65
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVH 141
+ +WN MIRG+A + E ++ LY QM D PD++T+ F+L C+ EG+++H
Sbjct: 66 NLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIH 125
Query: 142 GRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKR 200
V+ SG S+VF+ L+++Y +CG V AR +FD + R VV WNS+L Y
Sbjct: 126 KDVIRSGLESDVFVGAALIDMY----AKCGCVESARQVFDKIDERDVVCWNSMLATY--- 178
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
+QNG+ ++L+L M + + V ++
Sbjct: 179 ----------------------------SQNGQPDESLALCRVMAFNGLKPTEGTFVISI 210
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
+A A+ G L GK +H Y + + V AL+ MYA G + A +F ++
Sbjct: 211 AASADNGLLPQGKELHGYSWRHGFESNDKV----KTALMDMYAKSGSVNVARSLFELLEE 266
Query: 321 RNTVSWTSMITGFAKQGYAQEAL--------------LTFLGVLSACSHGGFVDEGRQFF 366
+ VSW +MITG+A G+A EAL +TF+GVL+ACSHGG ++EG+ F
Sbjct: 267 KRVVSWNAMITGYAMHGHANEALDLFKEMKGKVLPDHITFVGVLAACSHGGLLNEGKMHF 326
Query: 367 ECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNN 426
M ++ I P ++HY CM+DL G ++EA+ L+ M ++P+ V G+LL C+IH N
Sbjct: 327 RSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGN 386
Query: 427 AELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSW 486
E+ +KLV E++P+ Y+ L +N+YA A +W VA +R M+ G++K SW
Sbjct: 387 VEMGELALEKLV-ELEPDDGGNYVIL-SNMYAQAGKWDGVARLRDLMMNKGLKKSIACSW 444
Query: 487 VQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+++ +H F++ D+++ ++ IY L + GY P + +F +E+
Sbjct: 445 IEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEAGYAPQVGSVFHDVED 496
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 151/342 (44%), Gaps = 59/342 (17%)
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFD 180
Y+ LL C G+Q+H R+ G N + T L+NLY + + A LLFD
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICN---SLTNAHLLFD 60
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSL 240
+ R++ WN +++GY AW NG A+SL
Sbjct: 61 RISKRNLFLWNVMIRGY--------AW-----------------------NGPYELAISL 89
Query: 241 FNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIH 300
+ +MR + D+ L AC+ + ++ GK IH V G E V + ALI
Sbjct: 90 YYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDV---IRSGLESD-VFVGAALID 145
Query: 301 MYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALL---------------T 345
MYA CG +E A VF K+ R+ V W SM+ +++ G E+L T
Sbjct: 146 MYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGT 205
Query: 346 FLGVLSACSHGGFVDEGRQFFECMNQNW--GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQ 403
F+ ++A + G + +G++ +W G + + ++D+++++G ++ A SL +
Sbjct: 206 FVISIAASADNGLLPQGKELH---GYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFE 262
Query: 404 NMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQ 445
+ K +++ G +H +A A + +++ ++ P+
Sbjct: 263 LLEEK-RVVSWNAMITGYAMHGHANEALDLFKEMKGKVLPDH 303
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 176/523 (33%), Positives = 269/523 (51%), Gaps = 59/523 (11%)
Query: 24 FSLLQIRNTTKTL---FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTEN 80
SLL +T L ++H + G + + + Y+ G + +A +F+K
Sbjct: 528 LSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSV 587
Query: 81 PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
WN MI G A+ +++ L+ QM + PD T+ +LS ++V
Sbjct: 588 RHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEV 647
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKR 200
H +G L++L VG N+L+ Y K
Sbjct: 648 HSHATDAG----------LVDLR--------VG-----------------NALVHTYSKC 672
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
G++ A ++FD+M RNV +WT MI G AQ+G A S F +M R + D V+ L
Sbjct: 673 GNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSIL 732
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
SACA G L+ K +H++ S G L + NAL+HMYA CG I++A VF M
Sbjct: 733 SACASTGALEWVKEVHNHA---VSAGLVSDL-RVGNALVHMYAKCGSIDDARSVFDDMVE 788
Query: 321 RNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQF 365
R+ SWT MI G A+ G EAL +++ VL+ACSH G VDEGR+
Sbjct: 789 RDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQ 848
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHN 425
F M Q++GI+P +EHY CMVDL RAGL++EA + NMP++P+DA G+LL C +
Sbjct: 849 FLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYG 908
Query: 426 NAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQS 485
N E+A + A K ++ P+ A+ Y+ L++N+YAA +W+ VR M + G+RK PG+S
Sbjct: 909 NLEMA-EFAAKERLKLKPKSASTYV-LLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRS 966
Query: 486 WVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
W++++ +H FV GD+++ ++ IY L ++ + +GY PD
Sbjct: 967 WIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLKAKGYVPD 1009
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 153/311 (49%), Gaps = 40/311 (12%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H II +G Q Y+ KLL Y+ G L A +VF+K + IW MI G+A
Sbjct: 139 QVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYG 198
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E ++ +Y +M + +P+E TY +L C + G+++H ++ SG+ S+V + T
Sbjct: 199 HAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVET 258
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+N+Y+ G + A+L+FD M R+V+SW
Sbjct: 259 ALVNMYVKCG---SIEDAQLIFDKMVERNVISW--------------------------- 288
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
T MI G A G+ ++A LF +M+R + V+ L+A A G L+ K +HS
Sbjct: 289 ----TVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHS 344
Query: 278 Y-VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+ V ++ + + NAL+HMYA G I++A VF M R+ SWT MI G A+
Sbjct: 345 HAVNAGLALD-----LRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQH 399
Query: 337 GYAQEALLTFL 347
G QEA FL
Sbjct: 400 GRGQEAFSLFL 410
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 147/312 (47%), Gaps = 40/312 (12%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH+ II +GF + L+ YV G + +A +F+K + W MI G A
Sbjct: 240 KIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYG 299
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ +L+ QM + P+ YTY +L+ A G ++VH + +G
Sbjct: 300 RGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAG--------- 350
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
+ L L G N+L+ Y K G ID A +FD M R+
Sbjct: 351 --LALDLRVG-----------------------NALVHMYAKSGSIDDARVVFDGMTERD 385
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL--SACAEIGDLKLGKWI 275
+ SWT MI G AQ+G+ ++A SLF +M+R + ++ L SA A L+ K +
Sbjct: 386 IFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVV 445
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
H + EE + + + NALIHMYA CG I++A VF M R+ +SW +M+ G A+
Sbjct: 446 HKHAEEAGFISD----LRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQ 501
Query: 336 QGYAQEALLTFL 347
G EA FL
Sbjct: 502 NGCGHEAFTVFL 513
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 144/342 (42%), Gaps = 54/342 (15%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++HS + G + + L+ Y SG + +A VF+ W MI G A+
Sbjct: 341 EVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHG 400
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLL--SVCARCGLFREGEQVHGRVLASGYCSNVFI 155
+++ L+ QM P+ TY +L S A + VH +G+ S++ I
Sbjct: 401 RGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRI 460
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
N+L+ Y K G ID A +FD M
Sbjct: 461 G----------------------------------NALIHMYAKCGSIDDARLVFDGMCD 486
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
R+V+SW M+ G AQNG +A ++F +M++ + D ++ L+ L+ +
Sbjct: 487 RDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEV 546
Query: 276 HSYVEE-----NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMI 330
H + E +F VG +A IHMY CG I++A +F K+ R+ +W +MI
Sbjct: 547 HKHAVETGLISDFRVG---------SAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMI 597
Query: 331 TGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQN 372
G A+Q +EAL FL + GF+ + F ++ N
Sbjct: 598 GGAAQQRCGREALSLFLQM----QREGFIPDATTFINILSAN 635
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 126/277 (45%), Gaps = 46/277 (16%)
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
T + +V + K + + D ++Y +L C + +QVH ++ SG N+++
Sbjct: 98 TAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVAN 157
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L+ +Y+ CG + CAR +FD + +++ W +++ GY + G + A +++D+M
Sbjct: 158 KLLRVYI----RCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKM--- 210
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
RQ NE + ++ L AC +LK GK IH
Sbjct: 211 ------------------RQECGQPNE----------ITYLSILKACCCPVNLKWGKKIH 242
Query: 277 SY-VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
++ ++ F V + AL++MY CG IE+A +F KM RN +SWT MI G A
Sbjct: 243 AHIIQSGFQSD-----VRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAH 297
Query: 336 QGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQN 372
G QEA FL + GF+ + +N N
Sbjct: 298 YGRGQEAFHLFLQM----QREGFIPNSYTYVSILNAN 330
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 58/139 (41%), Gaps = 7/139 (5%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
ML E I+P A T I S + + ++H+ + G + L+
Sbjct: 716 MLREGIVP-------DATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVH 768
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y G + +A VF+ W MI G A+ +++ + +M + +P+ Y+
Sbjct: 769 MYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYS 828
Query: 121 YSFLLSVCARCGLFREGEQ 139
Y +L+ C+ GL EG +
Sbjct: 829 YVAVLTACSHAGLVDEGRR 847
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 165/497 (33%), Positives = 259/497 (52%), Gaps = 58/497 (11%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
LL Y G L +A +VFE+ + + W MI G+ R + ++ L+ +M + PD
Sbjct: 394 LLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPD 453
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
Y + +L+ CA G + G+ VH +IR N
Sbjct: 454 VYAVTSILNACAINGNLKSGKIVHD-----------YIREN------------------- 483
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
++ S VS N+L Y K G + A +F M ++V+SW TMI G +N +A
Sbjct: 484 ---NLETNSFVS-NALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEA 539
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEEN-FSVGREPVLVSLNN 296
L+LF EM+R D + L ACA + L G+ IH Y N +S + + N
Sbjct: 540 LTLFAEMQRESKP-DGTTVACILPACASLAALDKGREIHGYALRNGYSEDK-----YVTN 593
Query: 297 ALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------- 343
A++ MY CG + A +F + ++ VSWT MI G+ GY EA+
Sbjct: 594 AVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEP 653
Query: 344 --LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
++F+ +L ACSH G +DEG + F M + I+P +EHY CMVDL +R G + +A
Sbjct: 654 DEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKF 713
Query: 402 VQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAK 461
++ MP+KP+ + G+LL GCRIH++ +LA +VA+++ E++PE GY L+AN+YA A+
Sbjct: 714 IKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIF-ELEPEN-TGYYVLLANIYAEAE 771
Query: 462 RWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAM 521
+W++V +R+K+ + G++K PG SW++I G ++ FVAGD + QA I L + +
Sbjct: 772 KWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMK 831
Query: 522 QEGYKPDISELFLGIEE 538
+EGY P + L +E
Sbjct: 832 EEGYSPKTAYALLNADE 848
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 194/419 (46%), Gaps = 55/419 (13%)
Query: 23 IFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPS 82
I L R + + ++ S I +G + KL+ YV G L VF+K
Sbjct: 156 ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESK 215
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHG 142
+WN MI ++ S +S+ L+KQM++ +P+ YT+S +L A EG QVHG
Sbjct: 216 IFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHG 275
Query: 143 RVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGD 202
+ G+ S + +L++ Y + V CA+
Sbjct: 276 LICKLGFNSYNTVVNSLISFYFVGRK---VRCAQ-------------------------- 306
Query: 203 IDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSA 262
K+FDE+ R+V+SW +MISG +NG + + +F +M V +D +V A
Sbjct: 307 -----KLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVA 361
Query: 263 CAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRN 322
CA IG L LGK +HSY + ++ RE V NN L+ MY+ CG++ A VF +M +
Sbjct: 362 CANIGTLLLGKVLHSYSIKAATLDRE---VRFNNTLLDMYSKCGDLNSAIRVFERMDEKT 418
Query: 323 TVSWTSMITGFAKQGYAQEALLTF---------------LGVLSACSHGGFVDEGRQFFE 367
VSWTSMITG+ ++G + A+ F +L+AC+ G + G+ +
Sbjct: 419 VVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHD 478
Query: 368 CMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNN 426
+ +N ++ + D++++ G M +A + + MK D + + ++G N+
Sbjct: 479 YIREN-NLETNSFVSNALTDMYAKCGSMKDAHDVFSH--MKKKDVISWNTMIGGYTKNS 534
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 205/439 (46%), Gaps = 60/439 (13%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H I GF+ N ++ L++FY + A K+F++ + WN MI G+ ++
Sbjct: 272 QVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNG 331
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++ + ++ +M+ + D T + CA G G+ +H + +
Sbjct: 332 LDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLD------ 385
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
R V N+LL Y K GD++ A ++F+ M +
Sbjct: 386 ---------------------------REVRFNNTLLDMYSKCGDLNSAIRVFERMDEKT 418
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VVSWT+MI+G + G S A+ LF+EM+ V D A+ + L+ACA G+LK GK +H
Sbjct: 419 VVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHD 478
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y+ EN V +NAL MYA CG +++A+ VF M++++ +SW +MI G+ K
Sbjct: 479 YIRENNLETNSFV----SNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNS 534
Query: 338 YAQEALLTF--------------LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
EAL F +L AC+ +D+GR+ +N G
Sbjct: 535 LPNEALTLFAEMQRESKPDGTTVACILPACASLAALDKGREIHGYALRN-GYSEDKYVTN 593
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLL-GCRIHN-NAELASQVAQKLVAEI 441
+VD++ + GL+ A SL +P K D V ++++ G +H +E + Q + I
Sbjct: 594 AVVDMYVKCGLLVLARSLFDMIPNK--DLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGI 651
Query: 442 DPEQAAGYLALVANVYAAA 460
+P++ ++ ++ +YA +
Sbjct: 652 EPDE----VSFISILYACS 666
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 142/312 (45%), Gaps = 41/312 (13%)
Query: 23 IFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPS 82
I + I K+ +H I N +++ L Y G + +AH VF +
Sbjct: 460 ILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKD 519
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHG 142
WN MI G+ ++ P +++ L+ +M +E++PD T + +L CA +G ++HG
Sbjct: 520 VISWNTMIGGYTKNSLPNEALTLFAEM-QRESKPDGTTVACILPACASLAALDKGREIHG 578
Query: 143 RVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRG 201
L +GY + ++ ++++Y+ +CG + AR LFD +P + +VSW
Sbjct: 579 YALRNGYSEDKYVTNAVVDMYV----KCGLLVLARSLFDMIPNKDLVSW----------- 623
Query: 202 DIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALS 261
T MI+G +G +A++ FN+MR + D+V+ ++ L
Sbjct: 624 --------------------TVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILY 663
Query: 262 ACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-R 320
AC+ G L G I + +++ + EP L ++ + A G + +A+ + M +
Sbjct: 664 ACSHSGLLDEGWKIFNIMKKECQI--EPNLEHY-ACMVDLLARTGNLVKAHKFIKAMPIK 720
Query: 321 RNTVSWTSMITG 332
+ W +++ G
Sbjct: 721 PDATIWGALLCG 732
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 156/493 (31%), Positives = 265/493 (53%), Gaps = 56/493 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH +++ +GF+ ++ + L+ Y G L A +VFE+ + + WN MI G++
Sbjct: 420 EIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKG 479
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+ + L+++M ++ P T S +L C+R + G+ +HG ++ + +++F+ +
Sbjct: 480 DSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNS 539
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
+L++LY G +G A +F +MP +VVSWN ++ GYVK G A IF
Sbjct: 540 SLIDLYFKCG---NIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIF------- 589
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+MR+A V D + + L AC+++ L+ GK IH+
Sbjct: 590 ------------------------TDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHN 625
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
++ E+ E V+ AL+ MYA CG ++EA +F ++ R+ VSWTSMI + G
Sbjct: 626 FIIESKLEINEVVM----GALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHG 681
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
A EAL +TFL +LSACSH G VDEG +F M +G KP +EHY
Sbjct: 682 QAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHY 741
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMP-MKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
C++DL R G + EA+ ++Q P ++ + +L +L C +H +L Q+ +L+ E
Sbjct: 742 SCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIG-RLLIEK 800
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
DP+ + Y+ L +N+YA+ K+W +V VR K+ ++G++K PG SW+++ +H FV D
Sbjct: 801 DPDDPSTYIIL-SNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDK 859
Query: 502 TYKQASLIYKTLG 514
++ QA +IY+ +
Sbjct: 860 SHPQADMIYECMS 872
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 189/388 (48%), Gaps = 64/388 (16%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H+ +I +GF+ +++ + Y +A K+F++ A WN +I + +
Sbjct: 320 VHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQ 379
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
PEK++ L+++M +PD T + ++S CAR G+++H ++ SG+ + F+ +
Sbjct: 380 PEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSA 439
Query: 159 LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y G+CG + A+ +F+ + ++VVSWNS++ GY +GD
Sbjct: 440 LVDMY----GKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGD--------------- 480
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
S+ + LF M + L + L AC+ +L+LGK+IH
Sbjct: 481 ----------------SKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHG 524
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y+ N R + +N++LI +Y CG I A VF+ M + N VSW MI+G+ K G
Sbjct: 525 YIIRN----RVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVG 580
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE-- 380
EAL +TF VL ACS +++G++ N+ I+ ++E
Sbjct: 581 SYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEI-----HNFIIESKLEIN 635
Query: 381 --HYGCMVDLFSRAGLMDEAFSLVQNMP 406
G ++D++++ G +DEA + +P
Sbjct: 636 EVVMGALLDMYAKCGAVDEALHIFNQLP 663
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 184/391 (47%), Gaps = 68/391 (17%)
Query: 39 IHSQIIINGFSQKNYILAK-LLAFYVTSGYLINAHKVFEKTENP-STAIWNQMIRGHARS 96
IH +I+ G Q N L K L+ Y + +A VF+ ENP +WN ++ ++
Sbjct: 217 IHQKIVSLGL-QNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACTKN 275
Query: 97 ETPEKSVYLYKQMID-KETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
+ + ++ +++ +PD +TY +L C+ G G+ VH V+ SG+ +V +
Sbjct: 276 FIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVV 335
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
++ + +Y +C V F+D A K+FDEMP
Sbjct: 336 MSSAVGMY----AKCNV------FED------------------------AIKLFDEMPE 361
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
R+V SW +IS Q+G+ +AL LF EM+ + D V L +S+CA + DL+ GK I
Sbjct: 362 RDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEI 421
Query: 276 H-SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
H V F++ +++AL+ MY CG +E A VF ++QR+N VSW SMI G++
Sbjct: 422 HMELVRSGFALDG-----FVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYS 476
Query: 335 KQGYAQE---------------ALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
+G ++ L T +L ACS + G+ + I+ R+
Sbjct: 477 LKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGK-----FIHGYIIRNRV 531
Query: 380 EH----YGCMVDLFSRAGLMDEAFSLVQNMP 406
E ++DL+ + G + A ++ QNMP
Sbjct: 532 EADIFVNSSLIDLYFKCGNIGSAENVFQNMP 562
>gi|449477579|ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Cucumis sativus]
Length = 602
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/527 (30%), Positives = 277/527 (52%), Gaps = 59/527 (11%)
Query: 23 IFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY--LINAHKVFEKTEN 80
+ SL++ L QIH+ II Q + + L ++ + L + ++F+ N
Sbjct: 30 LISLIKSCTHKSQLLQIHAHIITTSSIQDPIVSLRFLTRTASAPFRDLGYSRRLFDLLTN 89
Query: 81 PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
P + +N M+R ++ S +P + +Y+Y+ M + D + SF + C + G Q+
Sbjct: 90 PFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQI 149
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKR 200
H R+ +G+ ++ + T++M+LY CG
Sbjct: 150 HARIFINGHQADSLLLTSMMDLY----SHCG----------------------------- 176
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR--VGLDQVALVA 258
+ A K+FDE+P ++VV+W +IS +N ++R AL LF M+ D+V +
Sbjct: 177 -KPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLL 235
Query: 259 ALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM 318
L ACA++ L+ G+ IH Y++++ E +L N+LI MY+ CG +++AY VF KM
Sbjct: 236 LLQACADLNALEFGERIHGYIQQH-GYNTES---NLCNSLISMYSRCGRMDKAYEVFDKM 291
Query: 319 QRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGR 363
+N VSW++MI+G + G+ +EA+ TF VLSACSH G VDEG
Sbjct: 292 TEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGM 351
Query: 364 QFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRI 423
FF+ M Q + I P + HYGC+VDL RAG++D+A+ L+ +M ++P+ + +LL CRI
Sbjct: 352 AFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRI 411
Query: 424 HNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPG 483
H + L ++ + L+ E+ ++A Y+ L+ N+Y++A W V +R+ M + G+ P
Sbjct: 412 HGHGNLGERIVEHLI-ELKSQEAGDYV-LLLNIYSSAGNWDKVTELRKLMKEKGIYTTPC 469
Query: 484 QSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
+ +++NGV+H F D ++ IYK L EI Q GY+ ++S
Sbjct: 470 CTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMS 516
>gi|115469684|ref|NP_001058441.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|53791823|dbj|BAD53889.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|53792844|dbj|BAD53877.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113596481|dbj|BAF20355.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|125598347|gb|EAZ38127.1| hypothetical protein OsJ_22476 [Oryza sativa Japonica Group]
Length = 648
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 154/412 (37%), Positives = 240/412 (58%), Gaps = 26/412 (6%)
Query: 144 VLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDI 203
VL G+ + F+ +L+ Y+ G VG AR +FD+M + V+SW S++ Y + GD+
Sbjct: 168 VLVGGFDRHRFVENSLIGAYVACGD---VGAARKVFDEMVEKDVISWTSIVVAYTRSGDM 224
Query: 204 DGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSAC 263
A ++F P +++V+WT M++G AQN +AL +F+ M + +D+V+L A+SAC
Sbjct: 225 RSAEEVFGRCPVKDMVAWTAMVTGYAQNAMPVKALEVFDRMAELGMVIDEVSLTGAISAC 284
Query: 264 AEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNT 323
A++G L+ W+ + E G V + + L+ MYA CG I+EA VF MQ +N
Sbjct: 285 AQLGALRRAAWVQE-IAERTGFGNN---VVVGSGLVDMYAKCGLIDEASKVFYGMQEKNV 340
Query: 324 VSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFE 367
+++SMI G A G A EA+ +TF+GVL+ACSH G V EGR +F
Sbjct: 341 YTYSSMIAGLASHGRASEAIALFKEMVNRANVEPNHVTFIGVLTACSHAGMVGEGRYYFA 400
Query: 368 CMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNA 427
M +GI P +HY CMVDL RAGL+DEA LV++M + P+ V G+LL CRIH +
Sbjct: 401 QMKDKYGIMPSADHYACMVDLLGRAGLVDEALDLVRSMSVTPHGGVWGALLGACRIHGKS 460
Query: 428 ELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWV 487
E+A VA+ L +++PE Y+ L++N+ A+A +W++V+ VR M K ++K P S
Sbjct: 461 EIAKVVAEHLF-KLEPESIGNYV-LLSNILASAGKWEEVSKVRILMRKQRLKKDPAVSLF 518
Query: 488 Q-INGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ +G++H F AGD+ + + I K L E+ + EGY P +S + + +
Sbjct: 519 EGRDGLVHQFFAGDNAHPRTHEIKKALLELVAKLKLEGYVPILSSIVYDVND 570
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 124/261 (47%), Gaps = 42/261 (16%)
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
Y SG + +A +VF + W M+ G+A++ P K++ ++ +M + DE +
Sbjct: 218 YTRSGDMRSAEEVFGRCPVKDMVAWTAMVTGYAQNAMPVKALEVFDRMAELGMVIDEVSL 277
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDD 181
+ +S CA+ G R V +G+ +NV + + L+++Y +CG+
Sbjct: 278 TGAISACAQLGALRRAAWVQEIAERTGFGNNVVVGSGLVDMY----AKCGL--------- 324
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
ID A K+F M +NV ++++MI+G A +G++ +A++LF
Sbjct: 325 ---------------------IDEASKVFYGMQEKNVYTYSSMIAGLASHGRASEAIALF 363
Query: 242 NEM-RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN--AL 298
EM RA V + V + L+AC+ G + G++ + +++ + ++ S ++ +
Sbjct: 364 KEMVNRANVEPNHVTFIGVLTACSHAGMVGEGRYYFAQMKDKYG-----IMPSADHYACM 418
Query: 299 IHMYASCGEIEEAYGVFRKMQ 319
+ + G ++EA + R M
Sbjct: 419 VDLLGRAGLVDEALDLVRSMS 439
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 46 NGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYL 105
GF + + L+ Y G + A KVF + + ++ MI G A +++ L
Sbjct: 303 TGFGNNVVVGSGLVDMYAKCGLIDEASKVFYGMQEKNVYTYSSMIAGLASHGRASEAIAL 362
Query: 106 YKQMIDK-ETEPDEYTYSFLLSVCARCGLFREG 137
+K+M+++ EP+ T+ +L+ C+ G+ EG
Sbjct: 363 FKEMVNRANVEPNHVTFIGVLTACSHAGMVGEG 395
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 172/549 (31%), Positives = 273/549 (49%), Gaps = 64/549 (11%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
M +EEI+P N T L T L++ QIHSQII F Y+ + L+
Sbjct: 441 MQIEEIVP-NQYTYPSILKTCIRLGDLELGE------QIHSQIIKTNFQLNAYVCSVLID 493
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y G L A + + W MI G+ + +K++ ++QM+D+ DE
Sbjct: 494 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 553
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLF 179
+ +S CA +EG+Q+H + SG+ S++ + L+ LY CG + + L F
Sbjct: 554 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY----SRCGKIEESYLAF 609
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
+ A ++WN+L+ G+ Q+G + +AL
Sbjct: 610 EQTEAGDNIAWNALVSGF-------------------------------QQSGNNEEALR 638
Query: 240 LFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
+F M R + + +A+ A +E ++K GK +H+ + + V NALI
Sbjct: 639 VFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVC----NALI 694
Query: 300 HMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------L 344
MYA CG I +A F ++ +N VSW ++I ++K G+ EAL +
Sbjct: 695 SMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHV 754
Query: 345 TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQN 404
T +GVLSACSH G VD+G +FE MN +G+ P+ EHY C+VD+ +RAGL+ A +Q
Sbjct: 755 TLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQE 814
Query: 405 MPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQ 464
MP+KP+ V +LL C +H N E+ A L+ E++PE +A Y+ L++N+YA +K+W
Sbjct: 815 MPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLL-ELEPEDSATYV-LLSNLYAVSKKWD 872
Query: 465 DVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEG 524
RQKM + GV+K PGQSW+++ +H F GD + A I++ ++T +A + G
Sbjct: 873 ARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIG 932
Query: 525 YKPDISELF 533
Y D L
Sbjct: 933 YVQDCFSLL 941
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 179/417 (42%), Gaps = 67/417 (16%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
M V I+P A SS ++I SL + Q+H ++ GFS Y+ L++
Sbjct: 239 MYVLGIMPTPYAFSSVLSACKKIESL-------EIGEQLHGLVLKLGFSSDTYVCNALVS 291
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y G LI+A +F +N +I G ++ EK++ L+K+M EPD T
Sbjct: 292 LYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNT 351
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFD 180
+ L+ C+ G G+Q+H G+ SN I L+NL
Sbjct: 352 LASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNL------------------ 393
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSL 240
Y K DI+ A F E NVV W M+ R + +
Sbjct: 394 ----------------YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRI 437
Query: 241 FNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS-YVEENFSVGREPVLVSLNNALI 299
F +M+ + +Q + L C +GDL+LG+ IHS ++ NF + + + LI
Sbjct: 438 FRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLN-----AYVCSVLI 492
Query: 300 HMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVL--------- 350
MYA G+++ A+ + + ++ VSWT+MI G+ + + +AL TF +L
Sbjct: 493 DMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEV 552
Query: 351 ------SACSHGGFVDEGRQFF--ECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAF 399
SAC+ + EG+Q C++ G + +V L+SR G ++E++
Sbjct: 553 GLTNAVSACAGLQALKEGQQIHAQACVS---GFSSDLPFQNALVTLYSRCGKIEESY 606
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 169/384 (44%), Gaps = 62/384 (16%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH++I+ G + L+ Y +G++ A +VF+ + W MI G +++E
Sbjct: 168 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 227
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ L+ M P Y +S +LS C + GEQ+HG VL G+ S+ ++
Sbjct: 228 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 287
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L++LY G + A +F +M R V++N
Sbjct: 288 ALVSLYFHLG---NLISAEHIFSNMSQRDAVTYN-------------------------- 318
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
T+I+G +Q G +A+ LF M + D L + + AC+ G L G+ +H+
Sbjct: 319 -----TLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 373
Query: 278 YVEE-NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA-- 334
Y + F+ + + AL+++YA C +IE A F + + N V W M+ +
Sbjct: 374 YTTKLGFASNNK-----IEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 428
Query: 335 ----------KQGYAQEAL---LTFLGVLSACSHGGFVDEGRQFF-ECMNQNWGIKPRIE 380
+Q +E + T+ +L C G ++ G Q + + N+ ++
Sbjct: 429 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF----QLN 484
Query: 381 HYGC--MVDLFSRAGLMDEAFSLV 402
Y C ++D++++ G +D A+ ++
Sbjct: 485 AYVCSVLIDMYAKLGKLDTAWDIL 508
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 188/453 (41%), Gaps = 93/453 (20%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++HSQI+ G + KL FY+ G L A KVF++ + WN+MI+ A
Sbjct: 66 KLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRN 125
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCG--LFREGEQVHGRVLASGYCSNVFI 155
+ L+ +M+ + P+E T+S +L C R G F EQ+H R+L G + +
Sbjct: 126 LIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-RGGSVAFDVVEQIHARILYQGLRDSTVV 184
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
L++LY +G V AR +FD + + S
Sbjct: 185 CNPLIDLYSRNG---FVDLARRVFDGLRLKDHSS-------------------------- 215
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
W MISG ++N +A+ LF +M + A + LSAC +I L++G+ +
Sbjct: 216 -----WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 270
Query: 276 HSYV-EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
H V + FS + NAL+ +Y G + A +F M +R+ V++ ++I G +
Sbjct: 271 HGLVLKLGFSSD-----TYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLS 325
Query: 335 KQGYAQEALL---------------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
+ GY ++A+ T ++ ACS G + G+Q G
Sbjct: 326 QCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ-LHAYTTKLGFASNN 384
Query: 380 EHYGCMVDLFSRA----------------------------GLMDE---AFSLVQNMPMK 408
+ G +++L+++ GL+D+ +F + + M ++
Sbjct: 385 KIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIE 444
Query: 409 ---PNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
PN S+L C + EL Q+ +++
Sbjct: 445 EIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 477
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 133/360 (36%), Gaps = 96/360 (26%)
Query: 116 PDEYTYSFLLSVCARC-GLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGC 174
P+ T +LL C + G EG ++H ++L G SN + L + YL G G
Sbjct: 42 PNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG--- 98
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
A +FD+MP R++ +WN ++K R I + +F M NV SG
Sbjct: 99 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSG------- 151
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
+ R V D V + IH+ + + R+ +V
Sbjct: 152 -----VLEACRGGSVAFDVV------------------EQIHARIL--YQGLRDSTVVC- 185
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------- 343
N LI +Y+ G ++ A VF ++ ++ SW +MI+G +K EA+
Sbjct: 186 -NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGI 244
Query: 344 ----LTFLGVLSACS-----------------------------------HGGFVDEGRQ 364
F VLSAC H G +
Sbjct: 245 MPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH 304
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP---MKPNDAVLGSLLLGC 421
F M+Q + Y +++ S+ G ++A L + M ++P+ L SL++ C
Sbjct: 305 IFSNMSQRDAVT-----YNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 359
>gi|297742136|emb|CBI33923.3| unnamed protein product [Vitis vinifera]
Length = 461
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 167/452 (36%), Positives = 243/452 (53%), Gaps = 82/452 (18%)
Query: 109 MIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSG- 167
M+ K P+ YT+ L+ VC G +GE++H R+L G+ ++F+R +L+++Y + G
Sbjct: 1 MVRKCVAPNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGR 60
Query: 168 -----------------------------GECGVGCARLLFDDMPARSVVSWNSLLKGYV 198
GE +G AR LF++MP R + SWNS++ GYV
Sbjct: 61 IGDARAMFEVCSISDLVTWNSMIDGYVKNGE--IGAARELFEEMPERDLFSWNSMIAGYV 118
Query: 199 KRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARV--------- 249
GD+ A +F++MP R++VSW MI G AQ A LFN M V
Sbjct: 119 GNGDMTAAEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELFNWMPYRNVVSWNIMLAL 178
Query: 250 ---------------------GLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGRE 288
++ LV+ L+ACA +G L GKWIHSY++ N + E
Sbjct: 179 YVRIKDYDECLRMFDKMMGETMPNEATLVSVLTACAHLGRLDRGKWIHSYIKNNRVI--E 236
Query: 289 PVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----- 343
P ++ L+ AL+ MYA CG ++ A VF KM R+ VSW SMI G+ G A +AL
Sbjct: 237 PDVL-LSTALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHGQADKALEMFLD 295
Query: 344 ----------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAG 393
TF+ VLSAC+H G + EG +F+ M + + I+P++EHYGCMVDL RAG
Sbjct: 296 MEKRGPMPNDATFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVDLLGRAG 355
Query: 394 LMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALV 453
LM + L++ MPM+ A+ G+LL CR H+N+ELA VA++L+ E++P YL L+
Sbjct: 356 LMKDLEELIRKMPMEGGTALWGALLSACRTHSNSELAEIVAKRLI-ELEPRDIGPYL-LL 413
Query: 454 ANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQS 485
+N+YAA +W DV VR+ M + G+ K G S
Sbjct: 414 SNIYAAEGKWDDVEIVRKMMKERGLTKTTGLS 445
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 39 IHSQIIINGFSQKNYILAK-LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
IHS I N + + +L+ LL Y G + A VF+K N S WN MI G+
Sbjct: 225 IHSYIKNNRVIEPDVLLSTALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHG 284
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+K++ ++ M + P++ T+ +LS CA G+ EG
Sbjct: 285 QADKALEMFLDMEKRGPMPNDATFICVLSACAHSGMILEG 324
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 171/524 (32%), Positives = 280/524 (53%), Gaps = 50/524 (9%)
Query: 55 LAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKET 114
L K +A +V + L +A VFEK +T WN M+ G+ + K + ++ DK
Sbjct: 76 LNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAH---ELFDKIP 132
Query: 115 EPDEYTYSFLLSVC--------ARCGLFRE---GEQVHGRVLASGYCSN----------- 152
EPD +Y+ +L VC A F + + L SG+ N
Sbjct: 133 EPDSVSYNIML-VCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFS 191
Query: 153 VFIRTNLMNLYLMSGGECGVG---CARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKI 209
V N ++ M G G A L+ ++ +SVV ++L GY+K G ++ A +I
Sbjct: 192 VMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERI 251
Query: 210 FDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDL 269
F M +N+V+W +MI+G +N ++ L +F M +RV + ++L + L C+ + L
Sbjct: 252 FQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSAL 311
Query: 270 KLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSM 329
LG+ +H V ++ + ++ + +LI MY CG+++ A+ +F +M R++ ++W +M
Sbjct: 312 PLGRQMHQLVSKS-PLSKDTTACT---SLISMYCKCGDLDSAWKLFLEMPRKDVITWNAM 367
Query: 330 ITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWG 374
I+G+A+ G ++AL +TF+ V+ AC+H GFVD G Q+F+ M + +G
Sbjct: 368 ISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFG 427
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVA 434
I+ + HY C++DL RAG +DEA SL++ MP P+ A+ G+LL CRIH N +LA A
Sbjct: 428 IEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFTPHAAIYGTLLGACRIHKNLDLAEFAA 487
Query: 435 QKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLH 494
+ L+ +DP A GY+ L AN+YAA +W VA VR+ M + V K PG SW++I V H
Sbjct: 488 RNLL-NLDPTSATGYVQL-ANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTH 545
Query: 495 DFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+F + D + + + I+K L E+ + GY PD+ +EE
Sbjct: 546 EFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVEE 589
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 122/264 (46%), Gaps = 26/264 (9%)
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQ-NGKSRQALSLFN 242
A VVS N + +V+ D++ A +F++M R V+W TM+SG + GK ++A LF+
Sbjct: 70 ASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFD 129
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL-VSLNNALIHM 301
++ + LV L + L + PV ++ N LI
Sbjct: 130 KIPEPDSVSYNIMLVCYLRSYGVKAALAF-------------FNKMPVKDIASWNTLISG 176
Query: 302 YASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG--YAQEALLTFLG----VLSACSH 355
+A G++++A+ +F M +N VSW++MI+G+ + G A E L +G V+
Sbjct: 177 FAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAML 236
Query: 356 GGFVDEGR-QFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM---PMKPND 411
G++ G+ + E + Q +K + + M+ + ++ + + M ++PN
Sbjct: 237 TGYMKFGKVELAERIFQRMAVKNLVT-WNSMIAGYVENCRAEDGLKVFKTMIESRVRPNP 295
Query: 412 AVLGSLLLGCRIHNNAELASQVAQ 435
L S+LLGC + L Q+ Q
Sbjct: 296 LSLSSVLLGCSNLSALPLGRQMHQ 319
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 6/138 (4%)
Query: 2 LVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAF 61
++E + NP + S L S L + Q+H + + S+ L++
Sbjct: 286 MIESRVRPNPLSLSSVLLGCSNLSALPLGR------QMHQLVSKSPLSKDTTACTSLISM 339
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
Y G L +A K+F + WN MI G+A+ K+++L+ +M + +PD T+
Sbjct: 340 YCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITF 399
Query: 122 SFLLSVCARCGLFREGEQ 139
++ C G G Q
Sbjct: 400 VAVILACNHAGFVDLGVQ 417
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 162/526 (30%), Positives = 271/526 (51%), Gaps = 55/526 (10%)
Query: 17 ALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFE 76
++T + L N K ++H I+ N + ++++ L+ Y + A +++
Sbjct: 343 SITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYD 402
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
I + MI G+ + E+++ +++ ++++ +P+ T + +L CA
Sbjct: 403 AARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPL 462
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKG 196
G+Q+HG VL + Y ++ + LM++Y
Sbjct: 463 GQQIHGYVLRNAYERKCYVESALMDMY--------------------------------- 489
Query: 197 YVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVAL 256
K G +D + IF +M ++ V+W +MIS +QNGK ++AL LF +M + + + +
Sbjct: 490 -AKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITI 548
Query: 257 VAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFR 316
AALSACA + + GK IH + G + +ALI MYA CG +E A VF
Sbjct: 549 SAALSACASLPAIYYGKEIHGVTIK----GPIKADIFAESALIDMYAKCGNLELALRVFE 604
Query: 317 KMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDE 361
M +N VSW S+I+ + G +E++ +TFL ++SAC+H G V+E
Sbjct: 605 FMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEE 664
Query: 362 GRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGC 421
G Q F+CM + + I PR+EH+ CMVDL+SR+G +D+A + +MP KP+ + G+LL C
Sbjct: 665 GVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHAC 724
Query: 422 RIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKP 481
R+H N ELA +Q+L ++DP +GY L++N+ A A RW V+ VR+ M + K
Sbjct: 725 RVHRNVELADIASQELF-KLDPAN-SGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKI 782
Query: 482 PGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
PG SWV +N H FVA D ++ ++ IY +L + + +EGY P
Sbjct: 783 PGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKTLLQELREEGYVP 828
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 144/315 (45%), Gaps = 38/315 (12%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H G + Y+ + L+ Y +G L NA F+ +WN M+ G ++
Sbjct: 163 VHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGD 222
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
+ +V L++ M EP+ T + LSVCA G Q+H +
Sbjct: 223 VDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAV------------- 269
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
+CG+ V N+LL Y K +D AW++F+ MP ++
Sbjct: 270 ----------KCGL-----------EPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDL 308
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
V+W MISGC QNG +A LF +M+R+ D + LV+ L A ++ LK GK +H Y
Sbjct: 309 VTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGY 368
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ N V + LVS AL+ +Y C ++ A ++ + + V ++MI+G+ G
Sbjct: 369 IVRN-CVNMDVFLVS---ALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGM 424
Query: 339 AQEALLTFLGVLSAC 353
++EAL F +L C
Sbjct: 425 SEEALQMFRYLLEQC 439
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 173/386 (44%), Gaps = 54/386 (13%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+HS + G + + LLA Y L +A ++FE WN MI G ++
Sbjct: 263 QLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNG 322
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++ L+ M PD T LL ++G++VHG ++ + C N
Sbjct: 323 LFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRN--CVN----- 375
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
M+++L+S +L+ Y K D+ A ++D +
Sbjct: 376 --MDVFLVS-------------------------ALVDIYFKCRDVRMAQNLYDAARAID 408
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VV +TMISG NG S +AL +F + + + V + + L CA + L LG+ IH
Sbjct: 409 VVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHG 468
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
YV N + R+ + +AL+ MYA CG ++ ++ +F KM +++ V+W SMI+ F++ G
Sbjct: 469 YVLRN-AYERK---CYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNG 524
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
QEAL +T LSAC+ + G++ + IK I
Sbjct: 525 KPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKG-PIKADIFAE 583
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMK 408
++D++++ G ++ A + + MP K
Sbjct: 584 SALIDMYAKCGNLELALRVFEFMPDK 609
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 143/318 (44%), Gaps = 46/318 (14%)
Query: 37 FQIHSQIIING-FSQKNYIL--AKLLAFYVTSGYLINAHKVFE---KTENPSTAIWNQMI 90
QIH++ +++G S N++ +LL YV + +A VF + S+ WN +I
Sbjct: 52 LQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFSALPRAAAASSLPWNWLI 111
Query: 91 RGHARSETPEKSVYLYKQMIDKET--EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASG 148
RG + +V Y +M PD +T +++ CA G G VH A G
Sbjct: 112 RGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALGAMSLGRLVHRTARAIG 171
Query: 149 YCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWK 208
++V++ + L+ +Y +G +G AR FD +P R V WN ++ G +K GD+DGA +
Sbjct: 172 LANDVYVGSALVKMYADAG---LLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVR 228
Query: 209 IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGD 268
+F M SGC N + L LS CA D
Sbjct: 229 LFRNM----------RASGCEPNFAT---------------------LACFLSVCATDAD 257
Query: 269 LKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTS 328
L G +HS G EP V++ N L+ MYA C +++A+ +F M + + V+W
Sbjct: 258 LLSGAQLHSLA---VKCGLEPE-VAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNG 313
Query: 329 MITGFAKQGYAQEALLTF 346
MI+G + G EA F
Sbjct: 314 MISGCVQNGLFVEAFGLF 331
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 118/250 (47%), Gaps = 15/250 (6%)
Query: 2 LVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAF 61
L+E+ I N T + L + L + QIH ++ N + +K Y+ + L+
Sbjct: 435 LLEQCIKPNAVTIASVLPGCASMAALPLGQ------QIHGYVLRNAYERKCYVESALMDM 488
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
Y G L +H +F K WN MI +++ P++++ L++QM + + + T
Sbjct: 489 YAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITI 548
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFD 180
S LS CA G+++HG + +++F + L+++Y +CG + A +F+
Sbjct: 549 SAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMY----AKCGNLELALRVFE 604
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR----NVVSWTTMISGCAQNGKSRQ 236
MP ++ VSWNS++ Y G + + + M + V++ +IS CA G +
Sbjct: 605 FMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEE 664
Query: 237 ALSLFNEMRR 246
+ LF M +
Sbjct: 665 GVQLFQCMTK 674
>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 558
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 175/523 (33%), Positives = 273/523 (52%), Gaps = 64/523 (12%)
Query: 35 TLFQIHSQIIINGFSQKNYILAKLLAFYVTSG--YLINAHKVFEKTENPSTAIWNQMIRG 92
++++H II + L LL V + L A VF + +P T +N +IR
Sbjct: 3 NVYRLHCYIIKSSKQNDPLSLRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTIIRS 62
Query: 93 HARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSN 152
H+R P S+ + M D +T+ F+L C+R + +H ++ G S+
Sbjct: 63 HSRF-FPSHSLSYFFSMRSNGIPLDNFTFPFVLKACSRLQI---NLHLHSLIVKYGLGSD 118
Query: 153 VFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDE 212
+F++ L+ +Y G CG ++ A K+FDE
Sbjct: 119 IFVQNALICVY----GYCG------------------------------SLEMAVKVFDE 144
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR-RARVGLDQVALVAALSACAEIGDLKL 271
M R+ VSW+T+I+ NG + +AL LF +M+ +V D+V +++ +SA + +GDL+L
Sbjct: 145 MSERDSVSWSTVIASFLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLEL 204
Query: 272 GKWIHSYVEE-NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMI 330
G+W+ +++ F V V+L ALI M++ CG I+E+ VF KM RN ++WT++I
Sbjct: 205 GRWVRAFIGRLGFGVS-----VALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALI 259
Query: 331 TGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGI 375
G G + EAL +TF GVL ACSHGG V EG FE + + +G+
Sbjct: 260 NGLGIHGRSMEALAMFHSMRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFESIRKVYGM 319
Query: 376 KPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQ 435
P ++HYGCMVD+ RAGL++EA+ V+ MPMKPN + +LL C HNN LA +V
Sbjct: 320 DPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTLLGACVNHNNLGLAEKVKA 379
Query: 436 KLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHD 495
K +++I Q G L L++NVY AA RW + A++R KM + + K PG S + ++ +H+
Sbjct: 380 K-ISKISSSQ-NGDLVLLSNVYGAAGRWVEKASIRSKMREKRIGKEPGCSSINVDQTIHE 437
Query: 496 FVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
FV+GD+++ Q+ I K L I GY + IEE
Sbjct: 438 FVSGDNSHPQSEDITKFLSSIIGDLRNRGYMMQTKNVLHDIEE 480
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 167/547 (30%), Positives = 278/547 (50%), Gaps = 63/547 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTEN----------------- 80
QIH ++G ++ L Y+ G + +A KVF++
Sbjct: 137 QIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKG 196
Query: 81 ------------------PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYS 122
P+ WN ++ G RS +++V ++++M PD+ T S
Sbjct: 197 CLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVS 256
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDM 182
+L G Q+HG V+ G + + + ++++Y SG G+ LFD+
Sbjct: 257 SVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGI---IKLFDEF 313
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIF----DEMPHRNVVSWTTMISGCAQNGKSRQAL 238
N+ + G + G +D A ++F ++ NVVSWT++I+GCAQNGK +AL
Sbjct: 314 EMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEAL 373
Query: 239 SLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNAL 298
LF EM+ A V ++V + + L AC I L G+ H + + V + +AL
Sbjct: 374 ELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDD----VHVGSAL 429
Query: 299 IHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------------- 343
I MYA CG I+ + VF M +N V W S++ G++ G A+E +
Sbjct: 430 IDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDF 489
Query: 344 LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQ 403
++F +LSAC G DEG ++F M++ +GIKPR+EHY CMV+L RAG + EA+ L++
Sbjct: 490 ISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIK 549
Query: 404 NMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRW 463
+P +P+ V G+LL CR+ NN +LA AQKL ++PE Y+ L++N+YAA W
Sbjct: 550 EIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLF-HLEPENPGTYV-LMSNIYAAKGMW 607
Query: 464 QDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQE 523
+V ++R KM +G++K PG SW+Q+ ++ +A D ++ Q I + + EI+ + +
Sbjct: 608 TEVDSIRNKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQIDQITEKMDEISEEMRKS 667
Query: 524 GYKPDIS 530
G++P++
Sbjct: 668 GHRPNLD 674
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/462 (24%), Positives = 207/462 (44%), Gaps = 77/462 (16%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q H++I+ +G YI AKL+A Y +A + + +P+ ++ +I +++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAK 95
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+S+ ++ +M PD + L VCA F+ G+Q+H SG + F++
Sbjct: 96 LFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQG 155
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
+L ++Y+ CG +G AR +FD M + VV+ ++LL GY ++G ++ +I EM
Sbjct: 156 SLFHMYM----RCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKS 211
Query: 217 ----NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
N+VSW ++SG ++G ++A+ +F +M DQV + + L + + +L +G
Sbjct: 212 GIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMG 271
Query: 273 KWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIE----------------------- 309
+ IH YV + + + V+ +A++ MY G +
Sbjct: 272 RQIHGYVIKQGLLKDKCVI----SAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITG 327
Query: 310 -----------EAYGVFRKMQRR-NTVSWTSMITGFAKQGYAQEAL-------------- 343
E +G+F++ + N VSWTS+I G A+ G EAL
Sbjct: 328 LSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPN 387
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE-----HYG-CMVDLFSRAGLMD 396
+T +L AC + + GR G R+ H G ++D++++ G +
Sbjct: 388 RVTIPSMLPACGNIAALGHGR-------STHGFAVRVHLLDDVHVGSALIDMYAKCGRIK 440
Query: 397 EAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
+ + MP K N SL+ G +H A+ + + L+
Sbjct: 441 MSQIVFNMMPTK-NLVCWNSLMNGYSMHGKAKEVMSIFESLM 481
>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 558
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 174/522 (33%), Positives = 274/522 (52%), Gaps = 62/522 (11%)
Query: 35 TLFQIHSQIIINGFSQKNYILAKLLAFYVTSG--YLINAHKVFEKTENPSTAIWNQMIRG 92
++++H II + L LL V + L A VF + +P T +N +IR
Sbjct: 3 NVYRLHCYIIKSSKQNDPLSLRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTIIRS 62
Query: 93 HARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSN 152
H+R P S++ + M D +T+ F+L C+R + +H ++ G S+
Sbjct: 63 HSRF-FPSHSLFYFFSMRSNGIPLDNFTFPFVLKACSRLQI---NLHLHSLIVKYGLDSD 118
Query: 153 VFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDE 212
+F++ L+ +Y G CG ++ A K+FDE
Sbjct: 119 IFVQNALICVY----GYCG------------------------------SLEMAVKVFDE 144
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR-RARVGLDQVALVAALSACAEIGDLKL 271
M R+ VSW+T+I+ NG + +AL LF +M+ +V D+V +++ +SA + +GDL+L
Sbjct: 145 MSERDSVSWSTVIASFLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLEL 204
Query: 272 GKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMIT 331
G+W+ +++ +G V V+L ALI M++ CG I+E+ VF KM RN ++WT++I
Sbjct: 205 GRWVRAFIGR-LGLG---VSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALIN 260
Query: 332 GFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIK 376
G G + EAL +TF GVL ACSHGG V EG FE + + + +
Sbjct: 261 GLGVHGRSTEALAMFHSMRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFESIRKVYRMD 320
Query: 377 PRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQK 436
P ++HYGCMVD+ RAGL++EA+ V+ MPMKPN + +LL C HNN LA +V K
Sbjct: 321 PLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTLLGACVNHNNLGLAEKVKAK 380
Query: 437 LVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDF 496
+++I Q G L L++NVY AA RW + A++R KM + + K PG S + ++ +H+F
Sbjct: 381 -ISKISSSQ-NGDLVLLSNVYGAAGRWVEKASIRSKMREKRIGKEPGCSSINVDQTIHEF 438
Query: 497 VAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
V+GD+++ Q+ I K L I GY + IEE
Sbjct: 439 VSGDNSHPQSEDITKFLSSIIGDLRNRGYMMQTKNVLHDIEE 480
>gi|357140545|ref|XP_003571826.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Brachypodium distachyon]
Length = 489
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 169/462 (36%), Positives = 258/462 (55%), Gaps = 35/462 (7%)
Query: 82 STAIWNQMIRGHARS-ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
ST + + +IR + S TP S L+ ++ P T+ FL AR R +
Sbjct: 23 STPLLDPLIRATSSSPSTPHLSFSLFLLLLRSALRPSHLTFPFLGRAAARLASPRLALSL 82
Query: 141 HGRVLASGYCS-NVFIRTNLMNLYLMSGGECGV-GCARLLFDDMPARSVVSWNSLLKGYV 198
H L G ++ I + +++Y C + AR LFD++P + VSWN+LL GY
Sbjct: 83 HSHPLRLGLLPCDLHIANSFVHMY----AACALPDLARRLFDEIPRPNPVSWNALLDGYA 138
Query: 199 KRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG----LDQV 254
K D+ A ++FD MPHR+VVSW+ MI GC + G+ R+AL+LF M A G + V
Sbjct: 139 KCRDLSAAREVFDRMPHRDVVSWSAMIDGCVKCGEYREALALFEMMEAAATGHGVRANDV 198
Query: 255 ALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGV 314
+++ L ACA +GDL+ G+ +H Y++E + + + L +L+ MYA CG I EA V
Sbjct: 199 TMISMLGACAHLGDLRRGRQMHRYLQERGFL----LNLRLATSLVDMYAKCGAISEALEV 254
Query: 315 FRKMQRRNT--VSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGG 357
FR + +T + W +MI G A G E + +T+LG+LSAC HGG
Sbjct: 255 FRAVPVASTDVLMWNAMIGGLAVHGMGMETVELFQEMQHSGVVPDEITYLGLLSACVHGG 314
Query: 358 FVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSL 417
VDE +FF C + G++P +EHY C+VD+ SRAG ++EA+ +V++MPM+P+ +VLG++
Sbjct: 315 LVDEAWRFF-CSLEAQGLRPHVEHYACLVDVLSRAGRLEEAYGVVKSMPMEPSVSVLGAI 373
Query: 418 LLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMG 477
L C +H EL V ++LV + P+ Y+ L +N+YA AKRWQ+ R+ M + G
Sbjct: 374 LNACHLHGWVELGEVVGRQLV-RLQPDHDGRYIGL-SNIYAVAKRWQEAKKARKVMSERG 431
Query: 478 VRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
++K PG S + + G F+A D T+ ++ IY L I M
Sbjct: 432 LKKIPGFSEIDVGGRPCRFIAQDKTHSGSTDIYALLDLIAMD 473
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 130/304 (42%), Gaps = 20/304 (6%)
Query: 32 TTKTLFQIHSQIIINGFSQKN-YILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMI 90
+ + +HS + G + +I + Y A ++F++ P+ WN ++
Sbjct: 75 SPRLALSLHSHPLRLGLLPCDLHIANSFVHMYAACALPDLARRLFDEIPRPNPVSWNALL 134
Query: 91 RGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYC 150
G+A+ + + +++ D+ D ++S ++ C +CG +RE + + A+
Sbjct: 135 DGYAKC----RDLSAAREVFDRMPHRDVVSWSAMIDGCVKCGEYREALALFEMMEAAATG 190
Query: 151 SNVFIRTNLMNLYLMSGGECGVG-------CARLLFDDMPARSVVSWNSLLKGYVKRGDI 203
V R N + + M G +G R L + ++ SL+ Y K G I
Sbjct: 191 HGV--RANDVTMISMLGACAHLGDLRRGRQMHRYLQERGFLLNLRLATSLVDMYAKCGAI 248
Query: 204 DGAWKIFDEMP--HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALS 261
A ++F +P +V+ W MI G A +G + + LF EM+ + V D++ + LS
Sbjct: 249 SEALEVFRAVPVASTDVLMWNAMIGGLAVHGMGMETVELFQEMQHSGVVPDEITYLGLLS 308
Query: 262 ACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR 321
AC G + +E G P V L+ + + G +EEAYGV + M
Sbjct: 309 ACVHGGLVDEAWRFFCSLEAQ---GLRP-HVEHYACLVDVLSRAGRLEEAYGVVKSMPME 364
Query: 322 NTVS 325
+VS
Sbjct: 365 PSVS 368
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 169/555 (30%), Positives = 283/555 (50%), Gaps = 63/555 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEK-------------------- 77
QIH ++G ++ + Y+ G + +A KVF++
Sbjct: 137 QIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKG 196
Query: 78 ---------TENPSTAI------WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYS 122
+E S+ I WN ++ G RS +++V +++++ PD+ T S
Sbjct: 197 CLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVS 256
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDM 182
+L + G +HG V+ G + + + ++++Y SG G+ LF+
Sbjct: 257 SVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIIS---LFNQF 313
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR----NVVSWTTMISGCAQNGKSRQAL 238
N+ + G + G +D A ++F+ + NVVSWT++I+GCAQNGK +AL
Sbjct: 314 EMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEAL 373
Query: 239 SLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNAL 298
LF EM+ A V + V + + L AC I L G+ H + + V + +AL
Sbjct: 374 ELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDN----VHVGSAL 429
Query: 299 IHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------------- 343
I MYA CG I + VF M +N V W S++ GF+ G A+E +
Sbjct: 430 IDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDF 489
Query: 344 LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQ 403
++F +LSAC G DEG ++F+ M++ +GIKPR+EHY CMV+L RAG + EA+ L++
Sbjct: 490 ISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIK 549
Query: 404 NMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRW 463
MP +P+ V G+LL CR+ NN +LA A+KL ++PE Y+ L++N+YAA W
Sbjct: 550 EMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLF-HLEPENPGTYV-LLSNIYAAKGMW 607
Query: 464 QDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQE 523
+V ++R KM +G++K PG SW+Q+ ++ +AGD ++ Q I + + EI+ + +
Sbjct: 608 TEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKS 667
Query: 524 GYKPDISELFLGIEE 538
G++P++ +EE
Sbjct: 668 GHRPNLDFALHDVEE 682
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 172/360 (47%), Gaps = 29/360 (8%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q H++I+ +G YI AKL+A Y +A V + +P+ ++ +I +++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+S+ ++ +M PD + L VCA F+ G+Q+H SG + F++
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP-- 214
++ ++Y+ CG +G AR +FD M + VV+ ++LL Y ++G ++ +I EM
Sbjct: 156 SMFHMYM----RCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 215 --HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
N+VSW ++SG ++G ++A+ +F ++ DQV + + L + + L +G
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271
Query: 273 KWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
+ IH YV + + + V+ +A+I MY G + +F + + + ITG
Sbjct: 272 RLIHGYVIKQGLLKDKCVI----SAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITG 327
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
++ G +AL +++ +++ C+ G E + F M Q G+KP
Sbjct: 328 LSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM-QVAGVKP 386
>gi|413943774|gb|AFW76423.1| hypothetical protein ZEAMMB73_944105 [Zea mays]
Length = 446
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 161/423 (38%), Positives = 242/423 (57%), Gaps = 25/423 (5%)
Query: 116 PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN-LMNLYLMSGGECG-VG 173
PDE T S ++S CA REG QVH ++ + + N L+++Y +CG
Sbjct: 8 PDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMY----AKCGRTW 63
Query: 174 CARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGK 233
AR +FD MP+RSVVS S+L GY K +++ A +F +M +NV++W +I+ AQNG+
Sbjct: 64 EARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGE 123
Query: 234 SRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV-EENFSVGREP-VL 291
+A+ LF +++R + L+AC I L+LG+ H +V +E F P
Sbjct: 124 EEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESD 183
Query: 292 VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------- 343
V + N+L+ MY G I++ VF +M R+ VSW +MI G+A+ G A++AL
Sbjct: 184 VFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLC 243
Query: 344 -------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMD 396
+T +GVLSAC H G VDEGR+ F M ++ GI P +HY CMVDL RAG +
Sbjct: 244 SNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLK 303
Query: 397 EAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANV 456
EA L+++MP +P+ + SLL CR+H N EL + A +L E+DPE + Y+ L++N+
Sbjct: 304 EAEELIKDMPTEPDSVLWASLLGACRLHKNVELGERTAGRLF-ELDPENSGPYV-LLSNM 361
Query: 457 YAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEI 516
YA +W DV VR+ M GV K PG SW++I ++ F+A D+ + + I+ TL I
Sbjct: 362 YAEMGKWADVFRVRRSMKDRGVSKQPGCSWIEIGSKMNVFLARDNRHPCRNEIHSTLRII 421
Query: 517 TMQ 519
M+
Sbjct: 422 QME 424
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 125/280 (44%), Gaps = 44/280 (15%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
+LA Y S + +A VF + + WN +I +A++ E+++ L+ Q+ P
Sbjct: 83 ILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPT 142
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYC------SNVFIRTNLMNLYLMSGGECG 171
YTY +L+ C + + G+Q H VL G+ S+VF+ +L+++YL +G
Sbjct: 143 HYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTG---S 199
Query: 172 VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQN 231
+ +F+ M AR VSWN+++ GY AQN
Sbjct: 200 IDDGAKVFERMAARDNVSWNAMIVGY-------------------------------AQN 228
Query: 232 GKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL 291
G+++ AL LF M + D V ++ LSAC G + G+ ++ E+ +
Sbjct: 229 GRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDH 288
Query: 292 VSLNNALIHMYASCGEIEEAYGVFRKMQRR-NTVSWTSMI 330
+ ++ + G ++EA + + M ++V W S++
Sbjct: 289 YT---CMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLL 325
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 11/165 (6%)
Query: 38 QIHSQIIINGF------SQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIR 91
Q H ++ GF ++ L+ Y+ +G + + KVFE+ WN MI
Sbjct: 164 QAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIV 223
Query: 92 GHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ-VHGRVLASGYC 150
G+A++ + +++L+++M+ PD T +LS C GL EG + H G
Sbjct: 224 GYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGIT 283
Query: 151 SNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPAR-SVVSWNSLL 194
+ T +++L +G + A L DMP V W SLL
Sbjct: 284 PSRDHYTCMVDLLGRAG---HLKEAEELIKDMPTEPDSVLWASLL 325
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 166/486 (34%), Positives = 265/486 (54%), Gaps = 58/486 (11%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAI-WNQMIRGHARSETPEKSVYLYKQMI--DKET 114
+++ YV G + A +FE+ + W MI G+ + + + L++QM+ E
Sbjct: 165 IISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEV 224
Query: 115 EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGC 174
+P+ T LLS C+ + G R L+ VFI N
Sbjct: 225 QPNAATMVCLLSACSTLCNYEVG-----RFLS------VFIDVN---------------- 257
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
+P +++ +L+ Y K GD++ AW+IFD + +N+ SW +I+GC Q G
Sbjct: 258 ------KIPLNTILV-TALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLL 310
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
+A+ L+ M+ V +++ LV LSACA +G L+LG+ +H Y+ N G + + V L
Sbjct: 311 EEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRN---GLD-LNVIL 366
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------- 343
AL+ MYA CG+I++A +F K ++ W +MI G A G +++L
Sbjct: 367 ATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGV 426
Query: 344 ----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAF 399
+TF+GVLSAC+H G V+EGR F M G+ P++EHY CMVDL RAG + EA+
Sbjct: 427 QPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAY 486
Query: 400 SLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAA 459
LVQNM + P+ + G+LL CRIH N ELA ++++ ++A DP G+ L++N+YA+
Sbjct: 487 ELVQNMLIPPDSIIWGALLSACRIHRNLELADKISETIMASQDPN--IGFCILLSNIYAS 544
Query: 460 AKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
+ RW+DVA VR+++ + ++KP G SWV+++GV+H FV D+T+ ++ IY +
Sbjct: 545 SGRWKDVARVRRQVKEKRIKKPSGCSWVEVDGVVHRFVVEDTTHLKSGEIYGAYEILVNH 604
Query: 520 AMQEGY 525
EGY
Sbjct: 605 LKAEGY 610
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 133/445 (29%), Positives = 244/445 (54%), Gaps = 34/445 (7%)
Query: 23 IFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPS 82
+ SLL+ + + QIH+Q +I+G + +++ KL+ + A V ++T +P+
Sbjct: 2 LLSLLRTATSLTQIHQIHAQTLIHGLPLQTHLIPKLIDLHSID----YARFVLDQTPSPT 57
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHG 142
WN +IR + +P+ S++LY +M+ T+P +T+ F+L C+ G EGEQ+H
Sbjct: 58 DFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHT 117
Query: 143 RVLASGYCSNVFIRTNLMNLYLMSGGEC-GVGCARLLFDDMPARSVVSWNSLLKGYVKRG 201
VL G+ S++F+ +L+++Y +C + AR +DDM R VSWNS++ GYV+ G
Sbjct: 118 HVLRLGFGSDLFVCNSLIDMYC----KCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWG 173
Query: 202 DIDGAWKIFDEMP-HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRA--RVGLDQVALVA 258
++ A +F+EMP RNVV WT MI+G + G + LSLF +M + V + +V
Sbjct: 174 QVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVC 233
Query: 259 ALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM 318
LSAC+ + + ++G+++ +++ V + P+ L ALI MY+ CG++E+A+ +F +
Sbjct: 234 LLSACSTLCNYEVGRFLSVFID----VNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGV 289
Query: 319 QRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGR 363
+N SW ++ITG + G +EA+ +T + VLSAC+ G ++ GR
Sbjct: 290 SCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGR 349
Query: 364 QFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRI 423
+ + +N G+ + +VD++++ G +D+A L+ + + A+ +++LG
Sbjct: 350 EVHLYLGRN-GLDLNVILATALVDMYAKCGKIDDA-CLIFVKTSEKDVALWNAMILGLAY 407
Query: 424 HNNAELASQVAQKLV-AEIDPEQAA 447
H + + V ++V A + P
Sbjct: 408 HGDGRDSLAVFSQMVRAGVQPNDVT 432
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H + NG + L+ Y G + +A +F KT A+WN MI G A
Sbjct: 350 EVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHG 409
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
S+ ++ QM+ +P++ T+ +LS C GL EG
Sbjct: 410 DGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEG 449
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 172/549 (31%), Positives = 273/549 (49%), Gaps = 64/549 (11%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
M +EEI+P N T L T L++ QIHSQII F Y+ + L+
Sbjct: 481 MQIEEIVP-NQYTYPSILKTCIRLGDLELGE------QIHSQIIKTNFQLNAYVCSVLID 533
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y G L A + + W MI G+ + +K++ ++QM+D+ DE
Sbjct: 534 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 593
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLF 179
+ +S CA +EG+Q+H + SG+ S++ + L+ LY CG + + L F
Sbjct: 594 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY----SRCGKIEESYLAF 649
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
+ A ++WN+L+ G+ Q+G + +AL
Sbjct: 650 EQTEAGDNIAWNALVSGF-------------------------------QQSGNNEEALR 678
Query: 240 LFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
+F M R + + +A+ A +E ++K GK +H+ + + V NALI
Sbjct: 679 VFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVC----NALI 734
Query: 300 HMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------L 344
MYA CG I +A F ++ +N VSW ++I ++K G+ EAL +
Sbjct: 735 SMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHV 794
Query: 345 TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQN 404
T +GVLSACSH G VD+G +FE MN +G+ P+ EHY C+VD+ +RAGL+ A +Q
Sbjct: 795 TLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQE 854
Query: 405 MPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQ 464
MP+KP+ V +LL C +H N E+ A L+ E++PE +A Y+ L++N+YA +K+W
Sbjct: 855 MPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLL-ELEPEDSATYV-LLSNLYAVSKKWD 912
Query: 465 DVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEG 524
RQKM + GV+K PGQSW+++ +H F GD + A I++ ++T +A + G
Sbjct: 913 ARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIG 972
Query: 525 YKPDISELF 533
Y D L
Sbjct: 973 YVQDCFSLL 981
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 179/417 (42%), Gaps = 67/417 (16%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
M V I+P A SS ++I SL + Q+H ++ GFS Y+ L++
Sbjct: 279 MYVLGIMPTPYAFSSVLSACKKIESL-------EIGEQLHGLVLKLGFSSDTYVCNALVS 331
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y G LI+A +F +N +I G ++ EK++ L+K+M EPD T
Sbjct: 332 LYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNT 391
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFD 180
+ L+ C+ G G+Q+H G+ SN I L+NL
Sbjct: 392 LASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNL------------------ 433
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSL 240
Y K DI+ A F E NVV W M+ R + +
Sbjct: 434 ----------------YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRI 477
Query: 241 FNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS-YVEENFSVGREPVLVSLNNALI 299
F +M+ + +Q + L C +GDL+LG+ IHS ++ NF + + + LI
Sbjct: 478 FRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLN-----AYVCSVLI 532
Query: 300 HMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVL--------- 350
MYA G+++ A+ + + ++ VSWT+MI G+ + + +AL TF +L
Sbjct: 533 DMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEV 592
Query: 351 ------SACSHGGFVDEGRQFF--ECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAF 399
SAC+ + EG+Q C++ G + +V L+SR G ++E++
Sbjct: 593 GLTNAVSACAGLQALKEGQQIHAQACVS---GFSSDLPFQNALVTLYSRCGKIEESY 646
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 169/384 (44%), Gaps = 62/384 (16%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH++I+ G + L+ Y +G++ A +VF+ + W MI G +++E
Sbjct: 208 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 267
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ L+ M P Y +S +LS C + GEQ+HG VL G+ S+ ++
Sbjct: 268 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 327
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L++LY G + A +F +M R V++N
Sbjct: 328 ALVSLYFHLG---NLISAEHIFSNMSQRDAVTYN-------------------------- 358
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
T+I+G +Q G +A+ LF M + D L + + AC+ G L G+ +H+
Sbjct: 359 -----TLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 413
Query: 278 YVEE-NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA-- 334
Y + F+ + + AL+++YA C +IE A F + + N V W M+ +
Sbjct: 414 YTTKLGFASNNK-----IEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 468
Query: 335 ----------KQGYAQEAL---LTFLGVLSACSHGGFVDEGRQFF-ECMNQNWGIKPRIE 380
+Q +E + T+ +L C G ++ G Q + + N+ ++
Sbjct: 469 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF----QLN 524
Query: 381 HYGC--MVDLFSRAGLMDEAFSLV 402
Y C ++D++++ G +D A+ ++
Sbjct: 525 AYVCSVLIDMYAKLGKLDTAWDIL 548
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 188/453 (41%), Gaps = 93/453 (20%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++HSQI+ G + KL FY+ G L A KVF++ + WN+MI+ A
Sbjct: 106 KLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRN 165
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCG--LFREGEQVHGRVLASGYCSNVFI 155
+ L+ +M+ + P+E T+S +L C R G F EQ+H R+L G + +
Sbjct: 166 LIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-RGGSVAFDVVEQIHARILYQGLRDSTVV 224
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
L++LY +G V AR +FD + + S
Sbjct: 225 CNPLIDLYSRNG---FVDLARRVFDGLRLKDHSS-------------------------- 255
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
W MISG ++N +A+ LF +M + A + LSAC +I L++G+ +
Sbjct: 256 -----WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 310
Query: 276 HSYV-EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
H V + FS + NAL+ +Y G + A +F M +R+ V++ ++I G +
Sbjct: 311 HGLVLKLGFSSD-----TYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLS 365
Query: 335 KQGYAQEALL---------------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
+ GY ++A+ T ++ ACS G + G+Q G
Sbjct: 366 QCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ-LHAYTTKLGFASNN 424
Query: 380 EHYGCMVDLFSRA----------------------------GLMDE---AFSLVQNMPMK 408
+ G +++L+++ GL+D+ +F + + M ++
Sbjct: 425 KIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIE 484
Query: 409 ---PNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
PN S+L C + EL Q+ +++
Sbjct: 485 EIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 517
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 133/360 (36%), Gaps = 96/360 (26%)
Query: 116 PDEYTYSFLLSVCARC-GLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGC 174
P+ T +LL C + G EG ++H ++L G SN + L + YL G G
Sbjct: 82 PNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG--- 138
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
A +FD+MP R++ +WN ++K R I + +F M NV SG
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSG------- 191
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
+ R V D V + IH+ + + R+ +V
Sbjct: 192 -----VLEACRGGSVAFDVV------------------EQIHARIL--YQGLRDSTVVC- 225
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------- 343
N LI +Y+ G ++ A VF ++ ++ SW +MI+G +K EA+
Sbjct: 226 -NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGI 284
Query: 344 ----LTFLGVLSACS-----------------------------------HGGFVDEGRQ 364
F VLSAC H G +
Sbjct: 285 MPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH 344
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP---MKPNDAVLGSLLLGC 421
F M+Q + Y +++ S+ G ++A L + M ++P+ L SL++ C
Sbjct: 345 IFSNMSQRDAVT-----YNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 399
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 172/559 (30%), Positives = 289/559 (51%), Gaps = 71/559 (12%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H+ +GF + + + L Y+ +++A K+F++ + +W+ MI G++R
Sbjct: 125 QLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLG 184
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE--------------------- 136
E++ L+ +M EP+ +++ +L+ G + E
Sbjct: 185 LVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVS 244
Query: 137 --------------GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLL---F 179
G QVHG V+ G S+ F+ + ++++Y G+CG C + + F
Sbjct: 245 CVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMY----GKCG--CVKEMSRVF 298
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIF----DEMPHRNVVSWTTMISGCAQNGKSR 235
D++ + S N+ L G + G +D A ++F D+ NVV+WT++I+ C+QNGK
Sbjct: 299 DEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDL 358
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL-VSL 294
+AL LF +M+ V + V + + + AC I L GK IH FS+ R V +
Sbjct: 359 EALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHC-----FSLRRGIFDDVYV 413
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEA------------ 342
+ALI MYA CG I+ A F KM N VSW +++ G+A G A+E
Sbjct: 414 GSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQ 473
Query: 343 ---LLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAF 399
L+TF VLSAC+ G +EG + + M++ GI+P++EHY C+V L SR G ++EA+
Sbjct: 474 KPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAY 533
Query: 400 SLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAA 459
S+++ MP +P+ V G+LL CR+HNN L A+KL ++P Y+ L++N+YA+
Sbjct: 534 SIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFF-LEPTNPGNYI-LLSNIYAS 591
Query: 460 AKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
W + +R+ M G+RK PG SW+++ +H +AGD ++ Q I + L ++ MQ
Sbjct: 592 KGLWDEENRIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQ 651
Query: 520 AMQEGYKPDISELFLGIEE 538
+ GY P + + +EE
Sbjct: 652 MKKSGYLPKTNFVLQDVEE 670
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 168/364 (46%), Gaps = 34/364 (9%)
Query: 38 QIHSQII-INGFSQKNYILAKLLAFYVTSGYLINAH---KVFEKTENPSTAIWNQMIRGH 93
Q H+ I+ +N FS + LL+FY + L + +P+ ++ +I
Sbjct: 21 QAHALILRLNLFSDTQ-LTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSLIHAF 79
Query: 94 ARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNV 153
ARS + + + PD + + CA G+Q+H ASG+ ++
Sbjct: 80 ARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDS 139
Query: 154 FIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDE 212
+ ++L ++YL +C + AR LFD MP R VV W++++ GY + G ++ A ++F E
Sbjct: 140 IVASSLTHMYL----KCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGE 195
Query: 213 MP----HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGD 268
M N+VSW M++G NG +A+ +F M D + L A + D
Sbjct: 196 MRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLED 255
Query: 269 LKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTS 328
+ +G +H YV + +G + +VS A++ MY CG ++E VF +++ S +
Sbjct: 256 VVVGAQVHGYVIKQ-GLGSDKFVVS---AMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNA 311
Query: 329 MITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNW 373
+TG ++ G AL +T+ ++++CS G E + F M Q +
Sbjct: 312 FLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDM-QAY 370
Query: 374 GIKP 377
G++P
Sbjct: 371 GVEP 374
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 161/552 (29%), Positives = 284/552 (51%), Gaps = 55/552 (9%)
Query: 2 LVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAF 61
L++++ + + T + + R+ ++L ++H +G + +A
Sbjct: 292 LLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAA 351
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
Y G L ++ +VF+ + + + WN ++ G+A++ P K++ LY QM D +PD +T
Sbjct: 352 YTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTI 411
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDD 181
LL C+R GE++HG L +G + FI +L++LY+ G A++LFD
Sbjct: 412 GSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFA---AQVLFDG 468
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
M RS+VSWN ++ GY +QNG +A++LF
Sbjct: 469 MEHRSLVSWNVMIAGY-------------------------------SQNGLPDEAINLF 497
Query: 242 NEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHM 301
+M + ++A++ AC+++ L+LGK +H + + E + VS +++I M
Sbjct: 498 RQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLT--EDIFVS--SSIIDM 553
Query: 302 YASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTF 346
YA G I + +F +++ ++ SW +I G+ G +EAL TF
Sbjct: 554 YAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTF 613
Query: 347 LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP 406
G+L ACSH G V++G ++F M I+P++EHY C+VD+ RAG +D+A L++ MP
Sbjct: 614 TGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMP 673
Query: 407 MKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDV 466
P+ + SLL CRIH N L +VA KL+ E++PE+ Y+ L++N++A + +W DV
Sbjct: 674 GDPDSRIWSSLLSSCRIHGNLGLGEKVANKLL-ELEPEKPENYV-LISNLFAGSGKWDDV 731
Query: 467 AAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYK 526
VR +M +G++K G SW+++ G +H+F+ GD + + +T + ++ GY
Sbjct: 732 RRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYT 791
Query: 527 PDISELFLGIEE 538
PD + +EE
Sbjct: 792 PDTGSVLHDLEE 803
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 137/289 (47%), Gaps = 42/289 (14%)
Query: 52 NYIL-AKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMI 110
+++L +++ Y G ++ VF+K + WN ++ + R+E E ++ ++ ++I
Sbjct: 33 DFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELI 92
Query: 111 D-KETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGE 169
E +PD +T ++ CA G+ +HG S+VF+ L+ +Y G+
Sbjct: 93 SVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMY----GK 148
Query: 170 CGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCA 229
CG+ ++ A K+F+ MP RN+VSW ++I G +
Sbjct: 149 CGL------------------------------VEEAVKVFEHMPERNLVSWNSIICGFS 178
Query: 230 QNGKSRQALSLFNEMRRARVGL--DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGR 287
+NG +++ + F EM D LV L CA D++ G +H +G
Sbjct: 179 ENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLA---VKLGL 235
Query: 288 EPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
L+ +NN+LI MY+ C + EA +F K ++N VSW SMI G+A++
Sbjct: 236 NEELM-VNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYARE 283
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 141/315 (44%), Gaps = 40/315 (12%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H + G +++ + L+ Y +L A +F+K + + WN MI G+AR E
Sbjct: 226 VHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREED 285
Query: 99 PEKSVYLYKQMI--DKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
++ YL ++M D + + DE+T +L VC + +++HG G SN +
Sbjct: 286 VCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVA 345
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
+ Y G C + +FD M ++V SWN+LL GY
Sbjct: 346 NAFIAAYTRCGALCS---SERVFDLMDTKTVSSWNALLCGY------------------- 383
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
AQN R+AL L+ +M + + D + + L AC+ + L G+ IH
Sbjct: 384 ------------AQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIH 431
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+ N + +P + +L+ +Y CG+ A +F M+ R+ VSW MI G+++
Sbjct: 432 GFALRN-GLAVDPF---IGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQN 487
Query: 337 GYAQEALLTFLGVLS 351
G EA+ F +LS
Sbjct: 488 GLPDEAINLFRQMLS 502
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 100/225 (44%), Gaps = 40/225 (17%)
Query: 124 LLSVCARCGLFREGEQVHGRVLASG-YCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDM 182
LL C + G ++H V AS +C++ + T ++ +Y M G
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGS-------------- 49
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
P+ S + +FD++ +N+ W ++S +N A+S+F+
Sbjct: 50 PSDSRM--------------------VFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFS 89
Query: 243 EM-RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHM 301
E+ D L + ACA + DL LG+ IH + V V + NALI M
Sbjct: 90 ELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSD----VFVGNALIAM 145
Query: 302 YASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
Y CG +EEA VF M RN VSW S+I GF++ G+ QE+ F
Sbjct: 146 YGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAF 190
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 142/333 (42%), Gaps = 46/333 (13%)
Query: 24 FSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAK------LLAFYVTSGYLINAHKVFEK 77
F+L + L + II+G + K +++ L+A Y G + A KVFE
Sbjct: 102 FTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEH 161
Query: 78 TENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETE--PDEYTYSFLLSVCARCGLFR 135
+ WN +I G + + ++S +++M+ E PD T +L VCA
Sbjct: 162 MPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIE 221
Query: 136 EGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLL 194
+G VHG + G + + +L+++Y +C + A+LLFD +++VSWNS++
Sbjct: 222 KGMAVHGLAVKLGLNEELMVNNSLIDMY----SKCRFLSEAQLLFDKNDKKNIVSWNSMI 277
Query: 195 KGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQV 254
GY + D+ + + +M + A++ D+
Sbjct: 278 GGYAREEDVCRTFYLLQKM-----------------------------QTEDAKMKADEF 308
Query: 255 ALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGV 314
++ L C E +L+ K +H Y + E V NA I Y CG + + V
Sbjct: 309 TILNVLPVCLERSELQSLKELHGYSWRHGLQSNELV----ANAFIAAYTRCGALCSSERV 364
Query: 315 FRKMQRRNTVSWTSMITGFAKQGYAQEALLTFL 347
F M + SW +++ G+A+ ++AL +L
Sbjct: 365 FDLMDTKTVSSWNALLCGYAQNSDPRKALDLYL 397
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 113/269 (42%), Gaps = 29/269 (10%)
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
L AC + D+++G+ +H V + + VL N +I MY+ CG ++ VF K++
Sbjct: 5 LQACGQRKDIEVGRRLHEMVSASTQFCNDFVL---NTRIITMYSMCGSPSDSRMVFDKLR 61
Query: 320 RRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSH--------------GGFVDEGR-Q 364
R+N W ++++ + + ++A+ F ++S H G +D G Q
Sbjct: 62 RKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQ 121
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
M + + ++ ++ + GL++EA + ++MP + N S++ C
Sbjct: 122 IIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPER-NLVSWNSII--CGFS 178
Query: 425 NNA---ELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKP 481
N E + + LV E L V V A + + AV +K+G+ +
Sbjct: 179 ENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEE 238
Query: 482 PGQSWVQINGVLHDFVAGDSTYKQASLIY 510
+ +N L D + +A L++
Sbjct: 239 -----LMVNNSLIDMYSKCRFLSEAQLLF 262
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 173/528 (32%), Positives = 270/528 (51%), Gaps = 66/528 (12%)
Query: 36 LFQIHSQIIINGFSQK----NYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIR 91
+ QI +Q+I + N I KL+ + A +F +P+ N ++
Sbjct: 4 VLQIQAQLITSPIPSSVVDPNLIAVKLIGACADHANVRQAALIFAHLASPNIFAHNATLK 63
Query: 92 GHARSETPEKSVYLYKQMIDKET--EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGY 149
A++ ++ + + PDE+T++ +L CA G+++H V G+
Sbjct: 64 ALAQNSHWFHAIQFFNHQVSSPNAPNPDEFTFTSVLKACAGLAHVVNGQKIHAMVTKQGF 123
Query: 150 CSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKI 209
SN+F+R NSL+ Y K G + A +
Sbjct: 124 ESNLFVR----------------------------------NSLIDMYFKAGYLLLARHL 149
Query: 210 FDEM--PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR-ARVGLDQVALVAALSACAEI 266
FDEM RNVV W MI+G AQN K A+ +F M++ V + V LV+ L ACA +
Sbjct: 150 FDEMFVRDRNVVCWNAMIAGYAQNEKYSDAIEVFRMMQQFGGVVPNDVTLVSVLPACAHL 209
Query: 267 GDLKLGKWIHSYVEENFSVGREPVL-VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVS 325
G L LGKWI ++ RE L + L NAL MYA CG I EA VF KM+ R+ +S
Sbjct: 210 GALDLGKWIDGFISR-----REMALGLFLGNALADMYAKCGCITEARRVFNKMEERDVIS 264
Query: 326 WTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMN 370
W+ +I G A G+A EA + F+G+L+AC+H G V +G F M+
Sbjct: 265 WSIIICGLAMYGHADEAFGCFYEMLDCGEKPNDVVFMGLLTACTHAGLVKKGLNCFNTMD 324
Query: 371 QNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELA 430
+ +G+ P++EHYGC+VDL SRAG +D+A ++ +MPMKPN + G+LL GCRI+ ++
Sbjct: 325 KEYGVSPKVEHYGCVVDLLSRAGELDKAEDMISSMPMKPNVIIWGALLGGCRIYRDSGRG 384
Query: 431 SQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQIN 490
+V Q ++ E+D + + Y+ L ANVY++ R D A R +M + GV K PG SW++++
Sbjct: 385 QRVVQHIL-ELDSDHSGSYVYL-ANVYSSMGRLDDAAKCRLRMRENGVLKTPGCSWIEVD 442
Query: 491 GVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+H+F GD ++ +++ IY + E+ + GYKP + I+E
Sbjct: 443 NTVHEFFMGDLSHPESNKIYSMIRELMWKMKLAGYKPKTDLVVHSIDE 490
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 165/521 (31%), Positives = 260/521 (49%), Gaps = 66/521 (12%)
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETE--PDEYTYSFLLSVCARC 131
V + + + +T +N ++RG + ++ L+ M + PD YTY L CA
Sbjct: 76 VLDASPDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAAT 135
Query: 132 GLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSW 190
G Q+H G NVF+ + +++Y CG A +F++M R VVSW
Sbjct: 136 DGLVLGRQIHSSTARLGLDGNVFVAHSAISMY----ARCGRPDDAYQMFEEMQYRDVVSW 191
Query: 191 NSLLKGYVKRG--------------------------------------DIDGAWKIFDE 212
N+++ G+ G DI +FDE
Sbjct: 192 NAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKARVEDIALLKGVFDE 251
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
M + ++SW M++ N +A+ LF M++ + D V L L +C E+ L LG
Sbjct: 252 MRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLG 311
Query: 273 KWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
K IH ++ R + L NAL+ MYA+CG ++EA VF M R+ VSWTS+I+
Sbjct: 312 KRIHEVIKRR----RMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISA 367
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
+ + G+ +EA+ + F+ +L+ACSH G +D G+ +F M + I P
Sbjct: 368 YGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAP 427
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
++EHY CMVDL RAG + EA+ + MP+KPN+ V G+LL CRIH+N ++ A L
Sbjct: 428 KLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSL 487
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
+ + P+Q GY L++N+YA A RW DV+ VR M G++K PG S ++ +H F
Sbjct: 488 L-RLAPKQ-TGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFH 545
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
GD+++ Q+ +IYK L E+ + + GY P++ +EE
Sbjct: 546 IGDTSHPQSKMIYKKLSELLRRIREMGYNPEVEATLHDVEE 586
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 36/82 (43%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
L+ Y G L A VF+ W +I + R +++ L+++M + EPD
Sbjct: 333 LMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPD 392
Query: 118 EYTYSFLLSVCARCGLFREGEQ 139
+ +L+ C+ GL G+
Sbjct: 393 SIAFVAILAACSHAGLLDMGKH 414
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 178/551 (32%), Positives = 289/551 (52%), Gaps = 39/551 (7%)
Query: 14 SSKALTTRQIFSLLQIRNTTKTLF------QIHSQIIINGFSQKNYILAKLLAFYVTSGY 67
+++ L + + SL+ I +L Q+H I +G ++ ++ Y G
Sbjct: 355 TTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGK 414
Query: 68 LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSV 127
+ A+KVF++ + WN M+ G++++ E ++ L+++M ++ E D T++ +++
Sbjct: 415 MEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITG 474
Query: 128 CARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNL-----YLMSGGECGVGCARLLFD-- 180
A+ G E V ++ G NV +L++ L+ G E + + +
Sbjct: 475 YAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLD 534
Query: 181 --DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP--HRNVVSWTTMISGCAQNGKSRQ 236
D A + N L+ Y K + A K+FD + R+VV+WT MI G AQ+G +
Sbjct: 535 GPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANN 594
Query: 237 ALSLFNEMRR--ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
AL LF+ M + + + L AL ACA + L+ G+ +H+YV NF V++ +
Sbjct: 595 ALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFY---GSVMLFV 651
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------- 343
N LI MY+ G+++ A VF M +RN VSWTS++TG+ G ++AL
Sbjct: 652 ANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPL 711
Query: 344 ----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAF 399
+TFL VL ACSH G VD G FF M++++G+ P EHY CMVDL+ RAG + EA
Sbjct: 712 VPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAM 771
Query: 400 SLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAA 459
L+ MPM+P V +LL CR+H+N EL A +L+ E++ Y L++N+YA
Sbjct: 772 KLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLL-ELESGNDGSY-TLLSNIYAN 829
Query: 460 AKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
A+RW+DVA +R M + G++K PG SW+Q + F GD ++ Q+ IY+TL ++ +
Sbjct: 830 ARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQIYETLADLIQR 889
Query: 520 AMQEGYKPDIS 530
GY P S
Sbjct: 890 IKAIGYVPQTS 900
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 151/314 (48%), Gaps = 46/314 (14%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEK-TENPSTAIW-NQMIRGHARS 96
+H Q I+ G ++ L+ Y+ S A + E+ +PS+ W NQ+IR
Sbjct: 180 LHQQSIMQGL--LFHLATNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHL 237
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
+P LY+QM PD YT+ F+ CA G +H V SG+ SNVF+
Sbjct: 238 GSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVC 297
Query: 157 TNLMNLYLMSGGECG-VGCARLLFDDMPARSV---VSWNSLLKGYVKRGDIDGAWKIFDE 212
++++Y G+CG + A +FDD+ R + VSWNS++ Y+ D + A +F +
Sbjct: 298 NAVVSMY----GKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHK 353
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
M R+++S D ++LV L ACA + G
Sbjct: 354 MTTRHLMS------------------------------PDVISLVNILPACASLAASLRG 383
Query: 273 KWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
+ +H + + V V + NA++ MYA CG++EEA VF++M+ ++ VSW +M+TG
Sbjct: 384 RQVHGFSIRSGLVDD----VFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTG 439
Query: 333 FAKQGYAQEALLTF 346
+++ G + AL F
Sbjct: 440 YSQAGRLEHALSLF 453
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 174/496 (35%), Positives = 260/496 (52%), Gaps = 78/496 (15%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
L+ Y G L +A ++FE+ WN MI G+A+S E+++ +++M P+
Sbjct: 204 LITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPN 263
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
E T +LS CA+ G G V + G SN+ RL
Sbjct: 264 ESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNL----------------------RL 301
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
+ N+L+ Y K GD+D A +F+ + ++++SW MI G + ++A
Sbjct: 302 V------------NALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEA 349
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
L+LF +M+++ V + V V+ L ACA +G L LGKWIH+Y+++ F +G SL +
Sbjct: 350 LALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKF-LGLTNT--SLWTS 406
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------------- 343
LI MYA CG IE A VF M+ ++ SW +MI+G A G+A AL
Sbjct: 407 LIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPD 466
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
+TF+GVLSACSH G V+ GRQ F M +++ I P+++HYGCM+DL RAGL DEA +L+
Sbjct: 467 DITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALM 526
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKR 462
+NM MKP+ A+ GSLL CR+H N EL + A K + E++PE Y+ L++N+YA A R
Sbjct: 527 KNMEMKPDGAIWGSLLGACRVHGNVELG-EFAAKHLFELEPENPGAYV-LLSNIYATAGR 584
Query: 463 WQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQ 522
W DVA +R K+ G++K YK I ++ GE +
Sbjct: 585 WDDVARIRTKLNDKGMKK------------------XQDIYKMLDEIDQSFGE------R 620
Query: 523 EGYKPDISELFLGIEE 538
G PD SE+ ++E
Sbjct: 621 PGXVPDTSEVLYDMDE 636
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 152/445 (34%), Positives = 251/445 (56%), Gaps = 31/445 (6%)
Query: 16 KALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHK 73
K L +LL + + L QIHSQII G + L+KL+ F S G L A
Sbjct: 28 KLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALL 87
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGL 133
+FE E P+ IWN MIRG++ S +P ++ Y +M+ EP+ YT+ FLL CA+ G
Sbjct: 88 LFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGA 147
Query: 134 FREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSL 193
+EG+Q+HG VL G S+ F+ T+L+N+Y +G +G A L+F R VS+ +L
Sbjct: 148 TQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNG---ELGYAELVFSKSSLRDAVSFTAL 204
Query: 194 LKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQ 253
+ GY RG +D A ++F+E+P R+ VSW MI+G AQ+G+ +AL+ F EM+RA V ++
Sbjct: 205 ITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNE 264
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
+V LSACA+ G L+LG W+ S++E++ +G LV NALI MY+ CG++++A
Sbjct: 265 STMVTVLSACAQSGSLELGNWVRSWIEDH-GLGSNLRLV---NALIDMYSKCGDLDKARD 320
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGF 358
+F + ++ +SW MI G++ +EAL +TF+ +L AC++ G
Sbjct: 321 LFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGA 380
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGS-- 416
+D G+ +++ + + ++D++++ G ++ A + MKP LGS
Sbjct: 381 LDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAG--MKPKS--LGSWN 436
Query: 417 -LLLGCRIHNNAELASQVAQKLVAE 440
++ G +H +A +A ++ +++ E
Sbjct: 437 AMISGLAMHGHANMALELFRQMRDE 461
>gi|357127896|ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Brachypodium distachyon]
Length = 500
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 157/419 (37%), Positives = 239/419 (57%), Gaps = 27/419 (6%)
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLK 195
G Q+H ++ +G S+ + +L+ Y CG V AR +FD + + WN ++
Sbjct: 88 GPQLHSVIVRAGLASDAHVSASLIQTYF----SCGRVASARSVFDQTTDKDIFCWNVMIS 143
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR-VGLDQV 254
GYVK G++ A ++FD MP RNVVSWTT+I AQ + +A+ +F M+ + D V
Sbjct: 144 GYVKSGNLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQVEEGIEPDGV 203
Query: 255 ALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGV 314
AL++ LSAC ++G + LG+W+H +V + P++ NA+I MY G + +A V
Sbjct: 204 ALLSVLSACGDLGAVDLGEWVHRFVVRRGLCWQIPLM----NAIIDMYVKLGCVRKAVEV 259
Query: 315 FRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFV 359
F M +++ V+WT++I GFA G EA+ +TFL +LSACSH G
Sbjct: 260 FEGMDQKSVVTWTTVIAGFALHGLGLEAIEMFRRMEMENVAPNDVTFLAILSACSHVGLT 319
Query: 360 DEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLL 419
D GR +F+ M + IK R+EHYGCMVDL RAG + EA LVQ+MP K N A+ G+LL
Sbjct: 320 DLGRWYFKIMVSQYRIKQRVEHYGCMVDLLGRAGYLMEAQDLVQDMPFKANAAIWGALLA 379
Query: 420 GCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVR 479
R H +AEL Q L+ E++P + Y+ L++N+YA +RW DV+ +R++M G+R
Sbjct: 380 AARTHGDAELGKQALLHLI-ELEPHNSGNYI-LLSNIYAEQERWDDVSKLRKQMKDRGLR 437
Query: 480 KPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
PG S ++++G++H+F + D ++ I K L EIT + + E IEE
Sbjct: 438 NVPGASSIEVDGMVHEFTSRDGSHPCLHKICKVLCEITTDMKSISFVALLPEALHDIEE 496
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 144/349 (41%), Gaps = 79/349 (22%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS- 96
Q+HS I+ G + ++ A L+ Y + G + +A VF++T + WN MI G+ +S
Sbjct: 90 QLHSVIVRAGLASDAHVSASLIQTYFSCGRVASARSVFDQTTDKDIFCWNVMISGYVKSG 149
Query: 97 ------------------------------ETPEKSVYLYKQM-IDKETEPDEYTYSFLL 125
+ P ++V ++++M +++ EPD +L
Sbjct: 150 NLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQVEEGIEPDGVALLSVL 209
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL---LFDDM 182
S C G GE VH V+ G C + + ++++Y+ +GC R +F+ M
Sbjct: 210 SACGDLGAVDLGEWVHRFVVRRGLCWQIPLMNAIIDMYV------KLGCVRKAVEVFEGM 263
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
+SVV+W TT+I+G A +G +A+ +F
Sbjct: 264 DQKSVVTW-------------------------------TTVIAGFALHGLGLEAIEMFR 292
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMY 302
M V + V +A LSAC+ +G LG+W + + + + V ++ +
Sbjct: 293 RMEMENVAPNDVTFLAILSACSHVGLTDLGRWYFKIMVSQYRIKQR---VEHYGCMVDLL 349
Query: 303 ASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQGYAQ---EALLTFL 347
G + EA + + M + N W +++ G A+ +ALL +
Sbjct: 350 GRAGYLMEAQDLVQDMPFKANAAIWGALLAAARTHGDAELGKQALLHLI 398
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 145/372 (38%), Positives = 225/372 (60%), Gaps = 21/372 (5%)
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
MP +S+VS +++ Y K G ID A +FD + R+ + W MI G AQ+G + L LF
Sbjct: 1 MPEKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLF 60
Query: 242 NEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHM 301
+M A+V ++V ++A LSAC + G L+ G+W+HSY+E N +G + V + +LI M
Sbjct: 61 RQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENN-GIG---INVRVGTSLIDM 116
Query: 302 YASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTF 346
Y+ CG +E+A VF ++ ++ V+W SM+ G+A G++Q+AL +TF
Sbjct: 117 YSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITF 176
Query: 347 LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP 406
+GVL+ACSH G V EG +FF M +GI+P++EHYGCMV+L RAG ++EA+ LV+NM
Sbjct: 177 IGVLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNME 236
Query: 407 MKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDV 466
+ + + G+LL CR+H N L Q+A+ LV++ +G L++N+YAAA W+ V
Sbjct: 237 IDQDPVLWGTLLGACRLHGNIALGEQIAEYLVSQ--NLANSGTYVLLSNIYAAAGNWEGV 294
Query: 467 AAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYK 526
A VR M + G K PG S +++N +H+F+AGD + ++ IY+ L EI GY
Sbjct: 295 ARVRTLMKESGFEKEPGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLKTHGYT 354
Query: 527 PDISELFLGIEE 538
P + +E+
Sbjct: 355 PQTDIVLHDLED 366
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 130/279 (46%), Gaps = 42/279 (15%)
Query: 55 LAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKET 114
L ++ Y G + A +F+ E WN MI G+A+ P + + L++QM++ +
Sbjct: 9 LTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKV 68
Query: 115 EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VG 173
P+E T +LS C + G G VH + +G NV + T+L+++Y +CG +
Sbjct: 69 RPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMY----SKCGSLE 124
Query: 174 CARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGK 233
ARL+F+ + + VV+WNS++ GY A +G
Sbjct: 125 DARLVFERISNKDVVAWNSMVVGY-------------------------------AMHGF 153
Query: 234 SRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG-KWIHSYVEENFSVGREPVLV 292
S+ AL LF EM + + L+AC+ G + G K+ +S +E G EP V
Sbjct: 154 SQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLVSEGWKFFYSMKDE---YGIEPK-V 209
Query: 293 SLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMI 330
++++ G +EEAY + + M+ ++ V W +++
Sbjct: 210 EHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLL 248
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 55/128 (42%)
Query: 10 NPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLI 69
N +T + S +T +HS I NG + L+ Y G L
Sbjct: 65 NAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLE 124
Query: 70 NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
+A VFE+ N WN M+ G+A + ++ L+K+M +P + T+ +L+ C+
Sbjct: 125 DARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACS 184
Query: 130 RCGLFREG 137
GL EG
Sbjct: 185 HAGLVSEG 192
>gi|125562063|gb|EAZ07511.1| hypothetical protein OsI_29767 [Oryza sativa Indica Group]
Length = 567
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 161/464 (34%), Positives = 266/464 (57%), Gaps = 28/464 (6%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI-WNQMIRG 92
+T Q+H+Q + GF +++ LLA Y + +VF + + WN +I G
Sbjct: 112 RTGAQVHAQAVRRGFLADVFVVNALLAMYGALRDAASMREVFGSCAGVADVVSWNTVIGG 171
Query: 93 HARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSN 152
+ + E + K++ D+ + ++S ++ A G ++ R+ A G N
Sbjct: 172 YVKCGEMESA----KRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREMFDRMPAIG--RN 225
Query: 153 VFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDE 212
V +++ + G + AR +FD+MP R++VSWN++L+GY D+DGA ++FD
Sbjct: 226 VVTWNSMVTGFARHGL---LPLARKMFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDV 282
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR-RARVGLDQVALVAALSACAEIGDLKL 271
MP ++VVSWT MISG AQ G+ + L LF M+ + V ++V +V+ LSACA + L+
Sbjct: 283 MPEKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEE 342
Query: 272 GKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMIT 331
G+W+H++++++ V +L ALI MYA CG + A +F + R+N +W ++IT
Sbjct: 343 GRWVHAFIDKHKMVLNNEY--NLGAALIDMYAKCGRTDIAVKIFNSLDRKNVSAWNALIT 400
Query: 332 GFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIK 376
A G AQ+++ +TF+GVL+ACSHGG VDEGR+ F+ M G++
Sbjct: 401 RLAMNGNAQDSVDAFEQMKRTGEKPNDITFVGVLTACSHGGLVDEGRRCFQSMASTCGVQ 460
Query: 377 PRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQK 436
P ++HYGCMVD+ RAGL++EA L+++MPM P+ V G+LL CR+H ++A +V +
Sbjct: 461 PEVKHYGCMVDMLGRAGLLEEAEELIRSMPMAPDVMVFGALLGACRMHKRFDVAERVQSE 520
Query: 437 LVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRK 480
+ + Q +G L++++YAAA +W DV RQ + + G+RK
Sbjct: 521 IHSLNLNAQQSGCHVLISDIYAAAGKWFDVLEARQVVQRSGIRK 564
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 182/368 (49%), Gaps = 37/368 (10%)
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLF-REGEQV 140
+T + N +IR A S +P S + ++ PD +T LL + F R G QV
Sbjct: 58 ATFLHNILIRASASSASPRLSFAAFSSLLRCGLVPDRFTLPPLLGSAGKLPAFPRTGAQV 117
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPA-RSVVSWNSLLKGYVK 199
H + + G+ ++VF+ L+ +Y G R +F VVSWN+++ GYVK
Sbjct: 118 HAQAVRRGFLADVFVVNALLAMY---GALRDAASMREVFGSCAGVADVVSWNTVIGGYVK 174
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
G+++ A ++FDEMP RN VSW+TM+ G A G+ A +F+ M +G + V +
Sbjct: 175 CGEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREMFDRM--PAIGRNVVTWNSM 232
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPV--LVSLNNALIHMYASCGEIEEAYGVFRK 317
++ A G L L + + + PV LVS NA++ Y+ +++ A +F
Sbjct: 233 VTGFARHGLLPLARKMFDEM---------PVRNLVSW-NAMLRGYSVNSDMDGARELFDV 282
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFVDE 361
M ++ VSWT MI+G+A+ G Q+ L +T + VLSAC++ ++E
Sbjct: 283 MPEKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEE 342
Query: 362 GRQFFECMNQNWGIKPRIEHYG-CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
GR ++++ + + G ++D++++ G D A + ++ K N + +L+
Sbjct: 343 GRWVHAFIDKHKMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSLDRK-NVSAWNALITR 401
Query: 421 CRIHNNAE 428
++ NA+
Sbjct: 402 LAMNGNAQ 409
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 166/442 (37%), Positives = 248/442 (56%), Gaps = 30/442 (6%)
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV-GCA 175
D +T F+L CA G VHG+ L G + ++ +L+++Y+ +CGV G A
Sbjct: 106 DNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYV----KCGVIGDA 161
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
R LFD M R + SWN+L+ GY+K G+I A +F+ M HRN+VSWT MISG QNG +
Sbjct: 162 RKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAE 221
Query: 236 QALSLFNEMRR--ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVS 293
QAL LF+EM + + + + V +V+ L ACA+ L+ G+ IH + +G + S
Sbjct: 222 QALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFAN---GIGLH-LNSS 277
Query: 294 LNNALIHMYASCGEIEEAYGVFRKMQR--RNTVSWTSMITGFAKQGYAQEAL-------- 343
+ AL MYA C + EA F + + +N ++W +MIT +A G EA+
Sbjct: 278 VQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLR 337
Query: 344 -------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMD 396
+TF+G+LS CSH G +D G F M ++PR+EHY C+VDL RAG +
Sbjct: 338 AGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLV 397
Query: 397 EAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANV 456
EA L+ MPM+ +V G+LL CR H N E+A A++L ++P+ + Y+ L++N+
Sbjct: 398 EAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFV-LEPDNSGNYV-LLSNL 455
Query: 457 YAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEI 516
YA A W++V +R + G++K PG SW++ING H F+ D ++ QA IYK L +
Sbjct: 456 YAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEAL 515
Query: 517 TMQAMQEGYKPDISELFLGIEE 538
+ GY PD S + I E
Sbjct: 516 PEKIKMAGYIPDTSFVLHDISE 537
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 13/196 (6%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMID--KETE 115
L+A Y+ G + A +FE+ E+ + W MI G+ ++ E+++ L+ +M+ E +
Sbjct: 179 LIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMK 238
Query: 116 PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGEC-GVGC 174
P+ T +L CA+ G ++H G N ++T L +Y +C +
Sbjct: 239 PNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMY----AKCYSLVE 294
Query: 175 ARLLFDDMP--ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV----VSWTTMISGC 228
AR FD + +++++WN+++ Y G A IF+ M V V++ ++SGC
Sbjct: 295 ARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGC 354
Query: 229 AQNGKSRQALSLFNEM 244
+ +G L+ FN+M
Sbjct: 355 SHSGLIDAGLNHFNDM 370
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 167/510 (32%), Positives = 261/510 (51%), Gaps = 58/510 (11%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
HS + + L+ Y G + A KVF++ WN MI G+A++
Sbjct: 139 HSLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCA 198
Query: 100 EKSVYLYKQMIDKET-EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
++V ++ +M ++ EPDE + +L C G G V G V+ G N +I +
Sbjct: 199 REAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSA 258
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
L+++Y K GD+ A +IFD M R+V
Sbjct: 259 LISMY----------------------------------AKCGDLGSARRIFDGMAARDV 284
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
++W +ISG AQNG + +A+SLF+ M+ V +++ L A LSACA IG L LGK I Y
Sbjct: 285 ITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKITLTAVLSACATIGALDLGKQIDEY 344
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ + + V+ ALI MYA CG + A VF++M ++N SW +MI+ A G
Sbjct: 345 ASQRGF--QHDIFVA--TALIDMYAKCGSLASAQRVFKEMPQKNEASWNAMISALASHGK 400
Query: 339 AQEAL-----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
A+EAL +TF+G+LSAC H G V+EG + F+ M+ +G+ P+IEH
Sbjct: 401 AKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLVNEGYRLFDMMSTLFGLVPKIEH 460
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
Y CMVDL +RAG + EA+ L++ MP KP+ LG+LL CR N ++ +V +++ E+
Sbjct: 461 YSCMVDLLARAGHLYEAWDLIEKMPEKPDKVTLGALLGACRSKKNVDIGERVI-RMILEV 519
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
DP + Y+ + + +YA W+D A +R M + G+ K PG SW+++ LH+F AGD
Sbjct: 520 DPSNSGNYI-ISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIEVENHLHEFHAGDG 578
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISE 531
+ + + + + +EGY P + E
Sbjct: 579 LCLDSIDLSNIIDLLYEELKREGYVPKVVE 608
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 155/406 (38%), Positives = 234/406 (57%), Gaps = 32/406 (7%)
Query: 152 NVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFD 211
+VF T +++ + + G V A+ LFD MP +S+VS ++L Y K G++D A +FD
Sbjct: 92 SVFFWTAIIHGHALRGD---VVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFD 148
Query: 212 EMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKL 271
M R+ V W MI G QNG +AL LF M +A+ ++V +++ LSAC ++G L+
Sbjct: 149 GMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALES 208
Query: 272 GKWIHSYVEEN---FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTS 328
G+W+HSY+E N F+ V + AL+ MY+ CG +E+A VF K+ ++ V+W S
Sbjct: 209 GRWVHSYIENNGIQFN-------VHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNS 261
Query: 329 MITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNW 373
MI G+A G++QEAL +TF+G+LSAC H G+V EG F M +
Sbjct: 262 MIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEY 321
Query: 374 GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQV 433
GI+P+IEHYGCMV+L RAG +++A+ LV+NM ++P+ + G+LL CR+H L ++
Sbjct: 322 GIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKI 381
Query: 434 AQKLVAEIDPEQA-AGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGV 492
+ LV D A +G L++N+YAA W VA +R M GV+K PG S +++N
Sbjct: 382 VELLV---DQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNK 438
Query: 493 LHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+H+F+AG + + IY L EI GY P + I E
Sbjct: 439 VHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGE 484
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 138/295 (46%), Gaps = 41/295 (13%)
Query: 39 IHSQIIINGFSQKNYI-LAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+ +Q + + +K+ + L +L Y G L A +F+ E WN MI G+ ++
Sbjct: 110 VSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNG 169
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
P +++ L+++M+ + +P+E T +LS C + G G VH + +G NV + T
Sbjct: 170 MPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGT 229
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L+++Y +CG + ARL+FD + + VV+WNS++ GY
Sbjct: 230 ALVDMY----SKCGSLEDARLVFDKIDDKDVVAWNSMIVGY------------------- 266
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
A +G S++AL LF M R + + + LSAC G + G I
Sbjct: 267 ------------AMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIF 314
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMI 330
+ +++ + G EP + ++++ G +E+AY + + M + V W +++
Sbjct: 315 NKMKDEY--GIEPK-IEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLL 366
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 256/511 (50%), Gaps = 55/511 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIHS I NGF Y+ L+ Y L A K+ E E W MI G+ + +
Sbjct: 367 QIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHD 426
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E+++ +K+M D PD + S CA R+G Q+H RV SGY +++ I
Sbjct: 427 FCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISI-- 484
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
WN+L+ Y + G + A+ +F E+ H++
Sbjct: 485 --------------------------------WNTLVNLYARCGRSEEAFSLFREIDHKD 512
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
++W +ISG Q+ QAL +F +M +A + ++A+SA A + D+K GK +H
Sbjct: 513 EITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHG 572
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
+ V NALI +Y CG IE+A +F +M RN VSW ++IT ++ G
Sbjct: 573 RAVKTGHTSETEV----ANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHG 628
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
EAL +TF+GVL+ACSH G V+EG +F+ M+ +G+ P +HY
Sbjct: 629 RGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHY 688
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
C+VD+ RAG +D A V MP+ N + +LL C++H N E+ ++A K + E++
Sbjct: 689 ACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIG-ELAAKHLLELE 747
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P +A Y+ L++N YA +W + VR+ M G+RK PG+SW+++ +H F GD
Sbjct: 748 PHDSASYV-LLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRL 806
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELF 533
+ + IYK L E+ + + GYK + LF
Sbjct: 807 HPLSDQIYKFLSELNDRLSKIGYKQENPNLF 837
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 124/502 (24%), Positives = 207/502 (41%), Gaps = 99/502 (19%)
Query: 2 LVEEIIPANP----------ATSSKALTTRQIFSLLQI----RNTTKTLFQIHSQIIING 47
L + I+P NP A+ +AL + + LQ N + +IH+ ++ G
Sbjct: 14 LAKFIVPDNPEKILSLVAAKASHHRALGSADLTCALQACRGRGNRWPLVLEIHATSVVRG 73
Query: 48 FSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYK 107
I L+ Y +G + A +VF++ + W M+ G+A+ +++ LY
Sbjct: 74 LGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYS 133
Query: 108 QMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSG 167
QM P Y S +LS C + LF +G +H +V +CS F+ L+ LYL G
Sbjct: 134 QMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFG 193
Query: 168 ---------------------------GECGVG-CARLLFDDMPARSV------------ 187
+CG G CA +FD+M +
Sbjct: 194 SFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLA 253
Query: 188 ---------------------------VSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVS 220
++ SLL YVK GDI+ A IF+ NVV
Sbjct: 254 ACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVL 313
Query: 221 WTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVE 280
W M+ Q ++ +F +M+ + ++ L C G ++LG+ IHS
Sbjct: 314 WNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSI 373
Query: 281 ENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQ 340
+N G E + ++ LI MY+ +++A + +++R+ VSWTSMI G+ + + +
Sbjct: 374 KN---GFESDMY-VSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCE 429
Query: 341 EALLTF------------LGVLSACSHGGFVDEGRQFFECMNQNW--GIKPRIEHYGCMV 386
EAL TF +G+ SA S + RQ + + + G I + +V
Sbjct: 430 EALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLV 489
Query: 387 DLFSRAGLMDEAFSLVQNMPMK 408
+L++R G +EAFSL + + K
Sbjct: 490 NLYARCGRSEEAFSLFREIDHK 511
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 166/506 (32%), Positives = 262/506 (51%), Gaps = 55/506 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH+ I+ + + + L Y+ G +A +VFE WN MIRG S
Sbjct: 251 QIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSG 310
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E++ + +M+++ PD TY+ +LS CAR G G+++H R G S+V
Sbjct: 311 QLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGN 370
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+N+Y K G + A ++FD MP R+
Sbjct: 371 ALINMY----------------------------------SKAGSMKDARQVFDRMPKRD 396
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VVSWTT++ A + ++ + F +M + V +++ + L AC+ LK GK IH+
Sbjct: 397 VVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHA 456
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
V + + +++ NAL+ MY CG +E+A VF M R+ V+W ++I G + G
Sbjct: 457 EVVKAGLLAD----LAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNG 512
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
EAL TF+ VLSAC V+EGR+ F M++++GI P +HY
Sbjct: 513 RGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHY 572
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
CMVD+ +RAG + EA ++ +P+KP+ A+ G+LL CRIH N E+ + A+ + +++
Sbjct: 573 ACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCL-KLE 631
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P+ A Y++L A +YAAA W+DVA +R+ M + GV+K PG+SW++I G +H FVA D +
Sbjct: 632 PQNAGLYVSLSA-IYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQS 690
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPD 528
+ + IY L + Q GY PD
Sbjct: 691 HPRTQEIYAELETLKKQMKSLGYVPD 716
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 184/399 (46%), Gaps = 58/399 (14%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H I+ G YI LL Y G + A ++F+K N S WN MI G+A
Sbjct: 49 QVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRG 108
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ L+ M + EPD++T+ +LS C+ + G ++H RV+ +G ++ +
Sbjct: 109 LAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGN 168
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L+++Y +CG V AR +FD M +R VSW +L Y
Sbjct: 169 ALISMY----AKCGSVRDARRVFDAMASRDEVSWTTLTGAY------------------- 205
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
A++G ++L ++ M + RV ++ + LSAC + L+ GK IH
Sbjct: 206 ------------AESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIH 253
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+++ E+ V ++ AL MY CG ++A VF + R+ ++W +MI GF
Sbjct: 254 AHIVES----EYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDS 309
Query: 337 GYAQEALLTF---------------LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G +EA TF VLSAC+ G + G++ ++ G+ +
Sbjct: 310 GQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKD-GLVSDVRF 368
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
+++++S+AG M +A + MP + D V + LLG
Sbjct: 369 GNALINMYSKAGSMKDARQVFDRMPKR--DVVSWTTLLG 405
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 189/464 (40%), Gaps = 121/464 (26%)
Query: 104 YLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLY 163
YL++ K + D Y Y LL C + G+QVH +L G NV+I L+ LY
Sbjct: 18 YLHR----KGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLY 73
Query: 164 LMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWT 222
CG V AR LFD +SVVSWN ++ GY R
Sbjct: 74 ----AHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHR---------------------- 107
Query: 223 TMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEEN 282
G +++A +LF M++ R+ D+ V+ LSAC+ L G+ IH V E
Sbjct: 108 ---------GLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEA 158
Query: 283 FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEA 342
++ NALI MYA CG + +A VF M R+ VSWT++ +A+ GY +E+
Sbjct: 159 GLAND----TTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEES 214
Query: 343 L---------------LTFLGVLSACS-----------HGGFVD---------------- 360
L +T++ VLSAC H V+
Sbjct: 215 LKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKM 274
Query: 361 --------EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM---PMKP 409
+ R+ FEC++ I + M+ F +G ++EA M + P
Sbjct: 275 YMKCGAFKDAREVFECLSYRDVIA-----WNTMIRGFVDSGQLEEAHGTFHRMLEEGVAP 329
Query: 410 NDAVLGSLLLGCR----IHNNAELASQVAQK-LVAEIDPEQAAGYLALVANVYAAAKRWQ 464
+ A ++L C + E+ ++ A+ LV+++ A + N+Y+ A +
Sbjct: 330 DRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNA------LINMYSKAGSMK 383
Query: 465 DVAAVRQKMIKMGVRKPPGQSWVQINGVLHD---FVAGDSTYKQ 505
D V +M K V SW + G D V +T+KQ
Sbjct: 384 DARQVFDRMPKRDV-----VSWTTLLGRYADCDQVVESFTTFKQ 422
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 165/509 (32%), Positives = 265/509 (52%), Gaps = 57/509 (11%)
Query: 38 QIHSQIIINGFSQKNYILAK--LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHAR 95
Q+H ++ +G + + L+ Y + A K+F++ + MI G+
Sbjct: 269 QLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVL 328
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
+ ++ +++ ++ + + T + +L CA G+++HG +L +G+
Sbjct: 329 NGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGH------ 382
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
GG C VG A ++ Y K G +D A + F +
Sbjct: 383 -----------GGSCYVGSA-----------------IMDMYAKCGRLDLAHQTFIGISD 414
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
++ V W +MI+ C+QNGK +A+ LF +M A D V++ AALSACA + L GK I
Sbjct: 415 KDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEI 474
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
H+++ R + +ALI MY+ CG ++ A VF M+ +N VSW S+I +
Sbjct: 475 HAFMMR--GAFRSDLFAE--SALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGN 530
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
G +++L +TFL ++SAC H G VDEG +F CM + GI R+E
Sbjct: 531 HGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARME 590
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HY CMVDLF RAG ++EAF ++ +MP P+ V G+LL CR+H N ELA +VA + + +
Sbjct: 591 HYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELA-EVASRNLFD 649
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
+DP Q +GY L++NV+A A +W+ V +R M + GV+K PG SW+ +N H FVA D
Sbjct: 650 LDP-QNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAAD 708
Query: 501 STYKQASLIYKTLGEITMQAMQEGYKPDI 529
++ Q+S IY L + ++ +EGY P +
Sbjct: 709 RSHPQSSQIYLLLKNLFLELRKEGYVPQL 737
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 143/328 (43%), Gaps = 39/328 (11%)
Query: 22 QIFSLLQIRNTTKTLFQ---IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKT 78
Q+ S+LQ L Q H+Q+++NG + KLL YV G ++A +F +
Sbjct: 48 QLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQL 107
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE 138
+ WN MIRG + ++ Y +M+ T PD+YT+ +++ C G
Sbjct: 108 RLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGR 167
Query: 139 QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYV 198
VH ++ G+ +VF+ ++L+ Y +G C + AR LFD MP++ V WN +L GYV
Sbjct: 168 VVHDKIQFMGFELDVFVGSSLIKFYSENG--C-IHDARYLFDRMPSKDGVLWNVMLNGYV 224
Query: 199 KRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVA 258
K GD D A + F EMRR + V
Sbjct: 225 KNGDWDNATGV-------------------------------FMEMRRTETNPNSVTFAC 253
Query: 259 ALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM 318
LS CA + G +H V + PV + ALI +Y C ++E A +F +
Sbjct: 254 VLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTF--ALIDIYFKCRDVEMARKIFDQR 311
Query: 319 QRRNTVSWTSMITGFAKQGYAQEALLTF 346
+ V T+MI+G+ G AL F
Sbjct: 312 TPVDIVVCTAMISGYVLNGMNNNALEIF 339
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 99/257 (38%), Gaps = 53/257 (20%)
Query: 124 LLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMP 183
+L C +G Q H ++L +G N + T L+ +Y++ G A+ +F +
Sbjct: 52 ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLD---AKNIFYQLR 108
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
WN +++G+ G D A + +M GC
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKM------------LGCGTLP----------- 145
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
D+ + AC + + LG+ +H ++ +G E + V + ++LI Y+
Sbjct: 146 --------DKYTFPYVIKACGGLNSVALGRVVHDKIQ---FMGFE-LDVFVGSSLIKFYS 193
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLG 348
G I +A +F +M ++ V W M+ G+ K G A +TF
Sbjct: 194 ENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFAC 253
Query: 349 VLSACSHGGFVDEGRQF 365
VLS C+ ++ G Q
Sbjct: 254 VLSVCASEIMINFGSQL 270
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 76/185 (41%), Gaps = 22/185 (11%)
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
LV+ L C + L G+ H+ + N +G +L L+ MY CG +A +F
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVN-GIGYNGIL---GTKLLGMYVLCGAFLDAKNIF 104
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEALL---------------TFLGVLSACSHGGFVD 360
+++ + W MI GF G ALL TF V+ AC V
Sbjct: 105 YQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVA 164
Query: 361 EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
GR + + Q G + + ++ +S G + +A L MP K D VL +++L
Sbjct: 165 LGRVVHDKI-QFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSK--DGVLWNVMLN 221
Query: 421 CRIHN 425
+ N
Sbjct: 222 GYVKN 226
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 173/521 (33%), Positives = 276/521 (52%), Gaps = 36/521 (6%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H+ I +G S YI +LL Y G L++A KVF++ + WN MI G+ +
Sbjct: 140 QVHAHIKTSG-SIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGG 198
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGY-----CSN 152
EK+ + + DK D ++++ ++S C + E +++ + Y C+
Sbjct: 199 NFEKA----RNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTI 254
Query: 153 VFIRTNLMNL-YLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFD 211
+ L G + R+ D V W SLL Y K G I+ A IFD
Sbjct: 255 SSALAASAAIPSLHMGKKIHGHIMRMGLDS----DEVVWCSLLDMYGKCGSIEEARYIFD 310
Query: 212 EMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKL 271
+M R+VVSWTTMI +NG+ + +LF + + + + L+ACA++ L
Sbjct: 311 KMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDL 370
Query: 272 GKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMIT 331
GK IH+Y+ VG + S +AL+HMY+ CG+IE A VF + + + SWTS++
Sbjct: 371 GKQIHAYM---VRVGFDS-FSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLV 426
Query: 332 GFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIK 376
G+A+ G +AL + F+GVLSAC+H G VD+G ++F + + G+
Sbjct: 427 GYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLT 486
Query: 377 PRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQK 436
I+HY C++DL +RAG EA S++ MP+KP+ + +LL GCRIH N ELA + A+
Sbjct: 487 RTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKS 546
Query: 437 LVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDF 496
L EI+PE A Y+ L AN+YA+A + A +R+ M G+ K PG SW++I +H F
Sbjct: 547 LF-EIEPENPATYVTL-ANIYASAGMRAEEANIRETMDSRGIVKKPGMSWIEIRREVHVF 604
Query: 497 VAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIE 537
GD+++ ++ I + L E++ + + GY PD + + +E
Sbjct: 605 SVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVLHDVE 645
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 192/385 (49%), Gaps = 31/385 (8%)
Query: 108 QMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSG 167
Q++ + +P Y LL C + +EG+QVH + SG ++I L+++Y
Sbjct: 109 QLLYRIEKPYASIYLTLLKFCLKQRALKEGKQVHAHIKTSGSIG-LYISNRLLDMY---- 163
Query: 168 GECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMIS 226
+CG + A +FD+M R + SWN ++ GYVK G+ + A +FD+MP+R+ SWT +IS
Sbjct: 164 AKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIIS 223
Query: 227 GCAQNGKSRQALSLFNEMRRARVGL-DQVALVAALSACAEIGDLKLGKWIHSYVEENFSV 285
GC Q+ + +AL L+ M++ ++ + +AL+A A I L +GK IH ++
Sbjct: 224 GCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLD 283
Query: 286 GREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-- 343
E V S L+ MY CG IEEA +F KM+ R+ VSWT+MI + K G +E
Sbjct: 284 SDEVVWCS----LLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFAL 339
Query: 344 -------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFS 390
TF GVL+AC+ D G+Q M + G +V ++S
Sbjct: 340 FRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVR-VGFDSFSSAASALVHMYS 398
Query: 391 RAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE-IDPEQAA-- 447
+ G ++ A S+ + +P +P+ SLL+G H + A + L+ P+ A
Sbjct: 399 KCGDIENAKSVFEILP-QPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFI 457
Query: 448 GYLALVANVYAAAKRWQDVAAVRQK 472
G L+ A+ K + ++++K
Sbjct: 458 GVLSACAHAGLVDKGLEYFHSIKEK 482
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 166/494 (33%), Positives = 261/494 (52%), Gaps = 30/494 (6%)
Query: 65 SGYLIN-----AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEY 119
+GY+ N A +F + +T W MI G+AR+ E+++ + + K P
Sbjct: 360 TGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLS 419
Query: 120 TYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLF 179
+ + C+ G+QVH + +G N ++ L+ LY G +G R +F
Sbjct: 420 SLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLY---GKYRSIGSVRQIF 476
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
D M + VS+NS + V+ D A +F+ MP +VVSWTT+IS CAQ + +A+
Sbjct: 477 DRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVE 536
Query: 240 LFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
+F M R + L L +G +LG+ IH+ +G + LV + NAL+
Sbjct: 537 IFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIA---IKLGMDSGLV-VANALV 592
Query: 300 HMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------L 344
MY C ++ VF M+ R+ +W ++ITG+A+ G +EA+ +
Sbjct: 593 SMYFKCSS-ADSLKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEV 651
Query: 345 TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQN 404
TF+G+L ACSH G VDEG QFF+ M+ ++G+ P +EHY CMVDL RAG + A + +
Sbjct: 652 TFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYD 711
Query: 405 MPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQ 464
MP++P+ + +LL C+IH N E+ + A+KL + I+P A Y+ +++N+Y++ W
Sbjct: 712 MPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFS-IEPSNAGNYV-MLSNIYSSQGMWD 769
Query: 465 DVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEG 524
+VA VR+ M + GV K PG SW+QI +H FV GD ++Q IY TL E+ G
Sbjct: 770 EVAKVRKLMKERGVNKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATLWELYTLLKATG 829
Query: 525 YKPDISELFLGIEE 538
Y PD + I+E
Sbjct: 830 YVPDTDFVLHDIDE 843
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 158/355 (44%), Gaps = 32/355 (9%)
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
G L A +VF+ WN MI + + P+ + + D + + T + LL
Sbjct: 47 GRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAG----RSLADAISGGNLRTGTILL 102
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPAR 185
S AR G R+ RV N ++ Y+ +G + AR LFD MP+R
Sbjct: 103 SGYARAGRVRDAR----RVFDGMGVRNTVAWNAMVTCYVQNGD---ITLARKLFDAMPSR 155
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
V SWN++L GY ++ A +F+ MP RN VSWT MISG + +A +F M
Sbjct: 156 DVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTML 215
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA-S 304
+ +Q LV+ LSA +G + + IH V + G E +V + A+++ Y
Sbjct: 216 CEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHK---TGFERDVV-VGTAILNGYTKD 271
Query: 305 CGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF-----------LGVLSAC 353
++ A F M RN +W+++I ++ G +A + +L+
Sbjct: 272 VNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGL 331
Query: 354 SHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
+ G +D+ + F+ +++ P + + M+ + + ++DEA L MP +
Sbjct: 332 ARYGRIDDAKILFDQIHE-----PNVVSWNAMITGYMQNEMVDEAEDLFNRMPFR 381
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 129/264 (48%), Gaps = 22/264 (8%)
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCAR 176
+EYT+S +++ ++ G + V+ R +V RT+++ G + A+
Sbjct: 289 NEYTWSTIIAALSQAGRIDDAFAVYQR----DPLKSVPSRTSMLTGLARYGR---IDDAK 341
Query: 177 LLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQ 236
+LFD + +VVSWN+++ GY++ +D A +F+ MP RN +SW MI+G A+NG+S Q
Sbjct: 342 ILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQ 401
Query: 237 ALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN 296
AL + R + +L ++ AC+ I L+ GK +HS + V N
Sbjct: 402 ALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVC----N 457
Query: 297 ALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEA-----------LLT 345
ALI +Y I +F +M ++TVS+ S ++ + EA +++
Sbjct: 458 ALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVVS 517
Query: 346 FLGVLSACSHGGFVDEGRQFFECM 369
+ ++SAC+ +E + F M
Sbjct: 518 WTTIISACAQADQGNEAVEIFRSM 541
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 134/313 (42%), Gaps = 45/313 (14%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
+L Y S + A +FE+ + W MI G+ E ++ +++ M+ + P+
Sbjct: 163 MLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPE 222
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
+ +LS G E +H V +G+ +V + T ++N Y + A
Sbjct: 223 QPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNM--LDSAVK 280
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
F+ M AR+ +W++++ + G ID A+ ++ P ++V S T+M++G A+ G+ A
Sbjct: 281 FFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGLARYGRIDDA 340
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
LF++ IH EP +VS NA
Sbjct: 341 KILFDQ-------------------------------IH-----------EPNVVSW-NA 357
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGG 357
+I Y ++EA +F +M RNT+SW MI G+A+ G +++AL++ +
Sbjct: 358 MITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPS 417
Query: 358 FVDEGRQFFECMN 370
FF C N
Sbjct: 418 LSSLTSSFFACSN 430
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/393 (18%), Positives = 147/393 (37%), Gaps = 94/393 (23%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFY-------------------------------VTSG 66
Q+HS + G +Y+ L+ Y V +
Sbjct: 439 QVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNN 498
Query: 67 YLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLS 126
A VF +P W +I A+++ ++V +++ M+ + P+ + LL
Sbjct: 499 LFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLG 558
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARS 186
+ G + G+Q+H + G S + + L+++Y +C + +FD M R
Sbjct: 559 LSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYF----KCSSADSLKVFDSMEERD 614
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
+ +WN+++ GY AQ+G R+A+ ++ M
Sbjct: 615 IFTWNTIITGY-------------------------------AQHGLGREAIRMYQLMVS 643
Query: 247 ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCG 306
A V ++V V L AC+ G + G + ++ G P+L ++ + G
Sbjct: 644 AGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDY--GLTPLLEHY-ACMVDLLGRAG 700
Query: 307 EIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQF 365
+++ A M ++V W+++ L AC V+ GR+
Sbjct: 701 DVQGAEHFIYDMPIEPDSVIWSAL--------------------LGACKIHKNVEIGRRA 740
Query: 366 FECMNQNWGIKP-RIEHYGCMVDLFSRAGLMDE 397
E + + I+P +Y + +++S G+ DE
Sbjct: 741 AEKL---FSIEPSNAGNYVMLSNIYSSQGMWDE 770
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 170/533 (31%), Positives = 282/533 (52%), Gaps = 57/533 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H+ + F I +L+ Y G L++A +F++ WN MI G+A
Sbjct: 84 RVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVG 143
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI-- 155
E++ L+ +M + D ++++ ++S G + E + R++ SN +
Sbjct: 144 RIEQARKLFDEMPHR----DNFSWNAVISGYVSQGWYMEALDLF-RMMQENESSNCNMFT 198
Query: 156 ---------------RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKR 200
R ++ YL+ G L D+ V W +LL Y K
Sbjct: 199 LSSALAAAAAISSLRRGKEIHGYLIRSG--------LELDE------VVWTALLDLYGKC 244
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
G ++ A IFD+M +++VSWTTMI C ++G+ ++ SLF ++ + V ++ L
Sbjct: 245 GSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVL 304
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
+ACA++ ++GK +H Y+ VG +P + + AL+H+Y+ CG E A VF +M R
Sbjct: 305 NACADLAAEQMGKEVHGYMTR---VGYDPFSFAAS-ALVHVYSKCGNTETARRVFNQMPR 360
Query: 321 RNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQF 365
+ VSWTS+I G+A+ G AL +TF+GVLSAC+H G VD G ++
Sbjct: 361 PDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEY 420
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHN 425
F + + G+ +HY C++DL +R+G EA +++ NMPMKP+ + SLL GCRIH
Sbjct: 421 FHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHG 480
Query: 426 NAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQS 485
N ELA + A+ L E++PE A Y+ L +N+YA A W + VR M G+ K PG+S
Sbjct: 481 NIELAERAAKALF-ELEPENPATYITL-SNIYANAGLWTEETKVRNDMDNRGIVKKPGKS 538
Query: 486 WVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
W++I +H F+ GD+++ + S I++ LGE++ + +EGY D + + +EE
Sbjct: 539 WIEIKRQVHVFLVGDTSHPKISDIHEYLGELSKKMKEEGYVADTNFVLHDVEE 591
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 170/341 (49%), Gaps = 27/341 (7%)
Query: 115 EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VG 173
+P YS L++ C R G++VH AS + + I L+++Y +CG +
Sbjct: 60 QPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMY----AKCGSLV 115
Query: 174 CARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGK 233
A++LFD++P + + SWN+++ GY G I+ A K+FDEMPHR+ SW +ISG G
Sbjct: 116 DAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGW 175
Query: 234 SRQALSLFNEMRRAR-VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLV 292
+AL LF M+ + L +AL+A A I L+ GK IH Y+ + E V
Sbjct: 176 YMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWT 235
Query: 293 SLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMI-----TGFAKQGYA-------- 339
AL+ +Y CG + EA G+F +M ++ VSWT+MI G K+G++
Sbjct: 236 ----ALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGS 291
Query: 340 --QEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDE 397
+ TF GVL+AC+ G++ M + G P +V ++S+ G +
Sbjct: 292 GVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTR-VGYDPFSFAASALVHVYSKCGNTET 350
Query: 398 AFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
A + MP +P+ SL++G + ++A Q + L+
Sbjct: 351 ARRVFNQMP-RPDLVSWTSLIVGYAQNGQPDMALQFFESLL 390
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 156/492 (31%), Positives = 265/492 (53%), Gaps = 56/492 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH +++ +GF+ ++ + L+ Y G L A +VFE+ + + WN MI G++
Sbjct: 228 EIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKG 287
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+ + L+++M ++ P T S +L C+R + G+ +HG ++ + +++F+ +
Sbjct: 288 DSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNS 347
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
+L++LY G +G A +F +MP +VVSWN ++ GYVK G A IF
Sbjct: 348 SLIDLYFKCG---NIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIF------- 397
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+MR+A V D + + L AC+++ L+ GK IH+
Sbjct: 398 ------------------------TDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHN 433
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
++ E+ E V+ AL+ MYA CG ++EA +F ++ R+ VSWTSMI + G
Sbjct: 434 FIIESKLEINEVVM----GALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHG 489
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
A EAL +TFL +LSACSH G VDEG +F M +G KP +EHY
Sbjct: 490 QAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHY 549
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMP-MKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
C++DL R G + EA+ ++Q P ++ + +L +L C +H +L Q+ +L+ E
Sbjct: 550 SCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIG-RLLIEK 608
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
DP+ + Y+ L +N+YA+ K+W +V VR K+ ++G++K PG SW+++ +H FV D
Sbjct: 609 DPDDPSTYIIL-SNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDK 667
Query: 502 TYKQASLIYKTL 513
++ QA +IY+ +
Sbjct: 668 SHPQADMIYECM 679
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 189/388 (48%), Gaps = 64/388 (16%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H+ +I +GF+ +++ + Y +A K+F++ A WN +I + +
Sbjct: 128 VHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQ 187
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
PEK++ L+++M +PD T + ++S CAR G+++H ++ SG+ + F+ +
Sbjct: 188 PEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSA 247
Query: 159 LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y G+CG + A+ +F+ + ++VVSWNS++ GY +GD
Sbjct: 248 LVDMY----GKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGD--------------- 288
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
S+ + LF M + L + L AC+ +L+LGK+IH
Sbjct: 289 ----------------SKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHG 332
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y+ N R + +N++LI +Y CG I A VF+ M + N VSW MI+G+ K G
Sbjct: 333 YIIRN----RVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVG 388
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE-- 380
EAL +TF VL ACS +++G++ N+ I+ ++E
Sbjct: 389 SYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEI-----HNFIIESKLEIN 443
Query: 381 --HYGCMVDLFSRAGLMDEAFSLVQNMP 406
G ++D++++ G +DEA + +P
Sbjct: 444 EVVMGALLDMYAKCGAVDEALHIFNQLP 471
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 196/415 (47%), Gaps = 71/415 (17%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQ---IHSQIIINGFSQKNYILAK-LLAFYVTSGYLINAHK 73
+ T ++ SLL+ +K L Q IH +I+ G Q N L K L+ Y + +A
Sbjct: 1 MDTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGL-QNNITLCKSLINLYFSCHLFQSAKL 59
Query: 74 VFEKTENP-STAIWNQMIRGHARSETPEKSVYLYKQMID-KETEPDEYTYSFLLSVCARC 131
VF+ ENP +WN ++ ++ + + ++ +++ +PD +TY +L C+
Sbjct: 60 VFQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGL 119
Query: 132 GLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWN 191
G G+ VH V+ SG+ +V + ++ + +Y +C V F+D
Sbjct: 120 GRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMY----AKCNV------FED---------- 159
Query: 192 SLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL 251
A K+FDEMP R+V SW +IS Q+G+ +AL LF EM+ +
Sbjct: 160 --------------AIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKP 205
Query: 252 DQVALVAALSACAEIGDLKLGKWIH-SYVEENFSVGREPVLVSLNNALIHMYASCGEIEE 310
D V L +S+CA + DL+ GK IH V F++ +++AL+ MY CG +E
Sbjct: 206 DSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDG-----FVSSALVDMYGKCGCLEM 260
Query: 311 AYGVFRKMQRRNTVSWTSMITGFAKQGYAQE---------------ALLTFLGVLSACSH 355
A VF ++QR+N VSW SMI G++ +G ++ L T +L ACS
Sbjct: 261 AKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSR 320
Query: 356 GGFVDEGRQFFECMNQNWGIKPRIEH----YGCMVDLFSRAGLMDEAFSLVQNMP 406
+ G+ + I+ R+E ++DL+ + G + A ++ QNMP
Sbjct: 321 SVNLQLGK-----FIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMP 370
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 148/334 (44%), Positives = 210/334 (62%), Gaps = 21/334 (6%)
Query: 220 SWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV 279
SWT+MI+G Q GK+++A+ LF +M A V ++V +VA L+ACA++G L LG IH Y
Sbjct: 194 SWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYS 253
Query: 280 EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYA 339
+ R V ++N LI MY CG +EEA VF +M+ R VSW++MI G A G A
Sbjct: 254 NRH-GFKRN---VRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRA 309
Query: 340 QEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGC 384
+EAL +TF+G+L ACSH G + EGR+FF M +++GI P+IEHYGC
Sbjct: 310 EEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGC 369
Query: 385 MVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPE 444
MVDL SRAGL+ EA + NMPMKPN V G+LL CR+H N E+A + + L+ E+DP
Sbjct: 370 MVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLL-ELDPL 428
Query: 445 QAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYK 504
GY +++N+YA A RW+D A VR+ M V+K PG S + ++GV+H+FVAG+ ++
Sbjct: 429 N-DGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHP 487
Query: 505 QASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
I++ E+ + +GY P+ S + L IEE
Sbjct: 488 DTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEE 521
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 153/346 (44%), Gaps = 48/346 (13%)
Query: 25 SLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKL---LAFYVTSGYLINAHKVFEKTENP 81
LL+ N+ L Q+H+QII L ++ AF + Y K EK + P
Sbjct: 66 DLLRNFNSPFELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEK-QKP 124
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVH 141
T +WN ++ A ++P ++ L+ ++ + PD +T S +L C G +H
Sbjct: 125 ETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILH 184
Query: 142 GRVLASGYCSNVFIRTNLMNLYLMSGG------------ECGVGCARLLF-------DDM 182
G V G+ S T+++ Y+ G E GV C + D+
Sbjct: 185 GVVEKVGFRS----WTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADL 240
Query: 183 PA-----------------RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMI 225
A R+V N+L+ YVK G ++ A K+F+EM R VVSW+ MI
Sbjct: 241 GALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMI 300
Query: 226 SGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSV 285
G A +G++ +AL LF++M + + + V + L AC+ +G + G+ + + ++ +
Sbjct: 301 GGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGI 360
Query: 286 GREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMI 330
+ + ++ + + G + EA+ M + N V W +++
Sbjct: 361 IPQ---IEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALL 403
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 174/550 (31%), Positives = 277/550 (50%), Gaps = 64/550 (11%)
Query: 11 PATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLIN 70
P SS + SLL I + +T H Q + G+ ++ + L+ Y T G L +
Sbjct: 74 PTRSSFPCAIKACSSLLDIFSGKQT----HQQAFVFGYQSDIFVSSALIVMYSTCGKLED 129
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY------SFL 124
A KVF++ + W MIRG+ + +V L+K ++ +E + D + +
Sbjct: 130 ARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSV 189
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPA 184
+S C+R E +H V+ G+ V + L++ Y GGE GV AR
Sbjct: 190 ISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAY-AKGGEGGVAVAR-------- 240
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
KIFD++ ++ VS+ +++S AQ+G S +A +F +
Sbjct: 241 -----------------------KIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRL 277
Query: 245 RRARV-GLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
+ +V + + L L A + G L++GK IH V +G E ++ + ++I MY
Sbjct: 278 IKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQV---IRMGLEDDVI-VGTSIIDMYC 333
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLG 348
CG +E A F +M+ +N SWT+MI G+ G+A +AL +TF+
Sbjct: 334 KCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVS 393
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
VL+ACSH G D G +F M +G++P +EHYGCMVDL RAG + +A+ L+Q M M+
Sbjct: 394 VLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKME 453
Query: 409 PNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAA 468
P+ + SLL CRIH N ELA +L E+DP GY L++++YA + RW+DV
Sbjct: 454 PDSIIWSSLLAACRIHKNVELAEISVARLF-ELDPSN-CGYYMLLSHIYADSGRWKDVER 511
Query: 469 VRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
VR M G+ KPPG S +++NG +H F+ GD + Q IY+ L E+ + ++ GY +
Sbjct: 512 VRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSN 571
Query: 529 ISELFLGIEE 538
S + ++E
Sbjct: 572 TSSVCHDVDE 581
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 178/404 (44%), Gaps = 77/404 (19%)
Query: 86 WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVL 145
WN +I ARS +++ + M P ++ + C+ G+Q H +
Sbjct: 44 WNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTHQQAF 103
Query: 146 ASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDID 204
GY S++F+ + L+ +Y CG + AR +FD++P R++VSW S+++GY D+
Sbjct: 104 VFGYQSDIFVSSALIVMY----STCGKLEDARKVFDEIPKRNIVSWTSMIRGY----DL- 154
Query: 205 GAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM------RRARVGLDQVALVA 258
NG + A+SLF ++ A + LD + +V+
Sbjct: 155 --------------------------NGNALDAVSLFKDLLIEENDDDATMFLDSMGMVS 188
Query: 259 ALSACAEIGDLKLGKWIHSYV-EENFSVGREPVLVSLNNALIHMYASCGE--IEEAYGVF 315
+SAC+ + L + IHS+V + F G VS+ N L+ YA GE + A +F
Sbjct: 189 VISACSRVAAKGLTESIHSFVIKRGFDRG-----VSVGNTLLDAYAKGGEGGVAVARKIF 243
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFV 359
++ ++ VS+ S+++ +A+ G + EA +T VL A SH G +
Sbjct: 244 DQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGAL 303
Query: 360 DEGRQFFECMNQN---WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGS 416
G+ C++ G++ + ++D++ + G ++ A M K N +
Sbjct: 304 RIGK----CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNK-NVRSWTA 358
Query: 417 LLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAA 460
++ G +H +A A ++ A ID Y+ V+ + A +
Sbjct: 359 MIAGYGMHGHAAKALEL---FPAMIDSGVRPNYITFVSVLAACS 399
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 82/134 (61%), Gaps = 4/134 (2%)
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
+V SW ++I+ A++G S +AL F+ MR+ + + + A+ AC+ + D+ GK H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTH 99
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
++ F G + + +++ALI MY++CG++E+A VF ++ +RN VSWTSMI G+
Sbjct: 100 ---QQAFVFGYQSDIF-VSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 337 GYAQEALLTFLGVL 350
G A +A+ F +L
Sbjct: 156 GNALDAVSLFKDLL 169
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 166/510 (32%), Positives = 264/510 (51%), Gaps = 58/510 (11%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
HS + + L+ Y G + +A KVF++ + + WN MI G+A++
Sbjct: 145 HSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCA 204
Query: 100 EKSVYLYKQMIDKET-EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
++V ++++M ++ EPDE + LL C G G V G V+ G N +I +
Sbjct: 205 REAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSA 264
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
L+++Y K G+++ A +IFD M R+V
Sbjct: 265 LISMY----------------------------------AKCGELESARRIFDGMAARDV 290
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
++W +ISG AQNG + +A+ LF+ M+ V +++ L A LSACA IG L LGK I Y
Sbjct: 291 ITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDEY 350
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ + + V+ ALI MYA G ++ A VF+ M ++N SW +MI+ A G
Sbjct: 351 ASQRGF--QHDIFVA--TALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGK 406
Query: 339 AQEAL-----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
A+EAL +TF+G+LSAC H G VDEG + F+ M+ +G+ P+IEH
Sbjct: 407 AKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEH 466
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
Y CMVDL +RAG + EA+ L++ MP KP+ LG+LL CR N ++ +V +++ E+
Sbjct: 467 YSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGALLGACRSKKNVDIGERV-MRMILEV 525
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
DP + Y+ + + +YA W+D A +R M + G+ K PG SW+++ LH+F AGD
Sbjct: 526 DPSNSGNYI-ISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIEVENHLHEFHAGDG 584
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISE 531
+ + + + + +EGY P + E
Sbjct: 585 LCLDSIDLSNIIDLLYEELKREGYVPKVVE 614
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 173/549 (31%), Positives = 289/549 (52%), Gaps = 65/549 (11%)
Query: 14 SSKALTTRQIFSLLQI----RNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLI 69
S ++ ++Q + LL + R++ ++H I+ NG Q ++ KL+ Y G +
Sbjct: 70 SQESSPSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVD 129
Query: 70 NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVC- 128
A KVF+KT + +WN + R + E+ + LY +M E D +TY+++L C
Sbjct: 130 YARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACV 189
Query: 129 -ARCGL--FREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPAR 185
+ C +G+++H + GY S+V+I T L+++Y G C V A +F+ MP R
Sbjct: 190 ASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFG--C-VDYASYVFNGMPVR 246
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM- 244
+VVSW++++ Y A+NGK+ +AL F EM
Sbjct: 247 NVVSWSAMIACY-------------------------------AKNGKAFEALRTFREMM 275
Query: 245 -RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
+ V +V+ L ACA + L+ G+ IH Y+ G + +L + +AL+ MY
Sbjct: 276 TETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYI---LRRGLDSILPVI-SALVTMYG 331
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLG 348
CG+++ VF +M R+ VSW S+I+ + GY ++A+ +TF+
Sbjct: 332 RCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVS 391
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
VL ACSH G V+EG++ FE M ++ GIKP++EHY CMVDL RA +DEA +VQ+M +
Sbjct: 392 VLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTE 451
Query: 409 PNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAA 468
P V GSLL CRIH N ELA + +++L A ++P+ A Y+ L+A++YA A+ W +V
Sbjct: 452 PGPKVWGSLLGSCRIHGNVELAERASRRLFA-LEPKNAGNYV-LLADIYAEAQMWDEVKR 509
Query: 469 VRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
V++ + G++K PG+ W+++ ++ FV+ D I+ L ++ ++GY P
Sbjct: 510 VKKLLEHRGLQKLPGRCWMEVRRKMYSFVSMDEFNPLMEQIHAFLVKLAEDMKEKGYIPQ 569
Query: 529 ISELFLGIE 537
+ +E
Sbjct: 570 TKGVLYELE 578
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 141/354 (39%), Gaps = 63/354 (17%)
Query: 108 QMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSG 167
+++ +E+ P + TY L+ C +G +VH +L +G + F+ T L+ +Y G
Sbjct: 67 RVLSQESSPSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLG 126
Query: 168 GECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISG 227
V AR +FD R++ WN+L +
Sbjct: 127 ---SVDYARKVFDKTRKRTIYVWNALFRAL------------------------------ 153
Query: 228 CAQNGKSRQALSLFNEMRRARVGLDQVALVAALSAC----AEIGDLKLGKWIHSYVEENF 283
G + L L+ +M R V D+ L AC L GK IH+++
Sbjct: 154 -TLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRG 212
Query: 284 SVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL 343
V + L+ MYA G ++ A VF M RN VSW++MI +AK G A EAL
Sbjct: 213 YNSH----VYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEAL 268
Query: 344 LTF-----------------LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMV 386
TF + VL AC+ +++GR + + G+ + +V
Sbjct: 269 RTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRR-GLDSILPVISALV 327
Query: 387 DLFSRAGLMDEAFSLVQNMPMKPNDAV-LGSLLLGCRIHNNAELASQVAQKLVA 439
++ R G +D + M D V SL+ +H A Q+ ++++A
Sbjct: 328 TMYGRCGKLDVGQRVFDR--MHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLA 379
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 161/526 (30%), Positives = 271/526 (51%), Gaps = 55/526 (10%)
Query: 17 ALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFE 76
++T + L N K ++H II N ++++ L+ Y + A +++
Sbjct: 343 SVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYD 402
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
I + +I G+ + EK++ +++ ++++ +P+ T + +L CA
Sbjct: 403 AARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPL 462
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKG 196
G+++HG VL + Y ++ + LM++Y
Sbjct: 463 GQEIHGYVLRNAYEGKCYVESALMDMY--------------------------------- 489
Query: 197 YVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVAL 256
K G +D + IF +M ++ V+W +MIS +QNG+ ++AL LF +M + + V +
Sbjct: 490 -AKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTI 548
Query: 257 VAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFR 316
+ALSACA + + GK IH + + G + +ALI MYA CG +E A VF
Sbjct: 549 SSALSACASLPAIYYGKEIHGVIIK----GPIKADIFAESALIDMYAKCGNMELALRVFE 604
Query: 317 KMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDE 361
M +N VSW S+I+ + G +E++ +TFL ++SAC+H G V+E
Sbjct: 605 FMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEE 664
Query: 362 GRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGC 421
G Q F+CM + + I PR+EH+ CMVDL+SR+G +D+A + +MP KP+ + G+LL C
Sbjct: 665 GLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHAC 724
Query: 422 RIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKP 481
R+H N ELA +Q+L ++DP +GY L++N+ A A RW V+ VR+ M + K
Sbjct: 725 RVHRNVELADIASQELF-KLDPGN-SGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKI 782
Query: 482 PGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
PG SWV +N H FVA D ++ ++ IY +L + + +EGY P
Sbjct: 783 PGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKALLQELREEGYVP 828
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 175/387 (45%), Gaps = 56/387 (14%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+HS + G Q+ + LL+ Y L +A ++FE WN MI G ++
Sbjct: 263 QLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNG 322
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++++ L+ M+ PD T LL ++G++VHG ++ + + F+ +
Sbjct: 323 LLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVS 382
Query: 158 NLMNLYLMSGGEC-GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L+++Y +C V AR L+D A VV ++++ GYV
Sbjct: 383 ALVDIYF----KCRDVRTARNLYDAARAIDVVIGSTVISGYV------------------ 420
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
NG S +AL +F + + + V + + L ACA I L LG+ IH
Sbjct: 421 -------------LNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIH 467
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
YV N G+ + +AL+ MYA CG ++ ++ +F KM ++ V+W SMI+ F++
Sbjct: 468 GYVLRNAYEGK----CYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQN 523
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G QEAL +T LSAC+ + G++ + + IK I
Sbjct: 524 GEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKG-PIKADIFA 582
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMK 408
++D++++ G M+ A + + MP K
Sbjct: 583 ESALIDMYAKCGNMELALRVFEFMPDK 609
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 174/386 (45%), Gaps = 56/386 (14%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H G + Y+ + L+ Y +G L +A F+ +WN M+ G+ ++
Sbjct: 163 VHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGD 222
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
+V L++ M EP+ T + LSVCA G Q+H +
Sbjct: 223 VGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAV------------- 269
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
+CG+ + V N+LL Y K +D AW++F+ +P ++
Sbjct: 270 ----------KCGL-----------EQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDL 308
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
V+W MISGC QNG +AL LF +M R+ D V LV+ L A ++ LK GK +H Y
Sbjct: 309 VTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGY 368
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ N V + LVS AL+ +Y C ++ A ++ + + V +++I+G+ G
Sbjct: 369 IIRN-CVHMDAFLVS---ALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGM 424
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQN-WGIKPRIEHY 382
+++AL +T VL AC+ + G++ + +N + K +E
Sbjct: 425 SEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVE-- 482
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMK 408
++D++++ G +D + + M +K
Sbjct: 483 SALMDMYAKCGRLDLSHYIFSKMSLK 508
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 146/322 (45%), Gaps = 46/322 (14%)
Query: 37 FQIHSQIIING-FSQKNYIL--AKLLAFYVTSGYLINAHKVFE---KTENPSTAIWNQMI 90
QIH++ +++G S N++ +LL YV + +A VF + S+ WN +I
Sbjct: 52 LQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFSALPRAAAGSSLPWNWLI 111
Query: 91 RGHARSETPEKSVYLYKQMIDKET--EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASG 148
RG + +V Y +M PD +T +++ CA G G VH A+G
Sbjct: 112 RGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAVSLGRLVHRTARATG 171
Query: 149 YCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWK 208
S+V++ + L+ +Y +G + AR FD MP R V WN ++ GY+K GD+ GA +
Sbjct: 172 LASDVYVGSALIKMYSDAG---LLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVR 228
Query: 209 IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGD 268
+F M +SGC N + L LS CA D
Sbjct: 229 LFRNM----------RVSGCEPNFAT---------------------LACFLSVCAAEAD 257
Query: 269 LKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTS 328
L G +HS G E V++ N L+ MYA C +++A+ +F + R + V+W
Sbjct: 258 LLSGVQLHSLA---VKCGLEQE-VAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNG 313
Query: 329 MITGFAKQGYAQEALLTFLGVL 350
MI+G + G EAL F +L
Sbjct: 314 MISGCVQNGLLDEALGLFCDML 335
>gi|7488184|pir||E71401 probable selenium-binding protein - Arabidopsis thaliana
Length = 1070
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 147/441 (33%), Positives = 254/441 (57%), Gaps = 41/441 (9%)
Query: 116 PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV-GC 174
PD++ +S L+ CA G G QVH + S Y ++ ++++L+++Y +CG+
Sbjct: 40 PDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMY----AKCGLLNS 95
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
A+ +FD + ++ +SW +++ GY K G + A ++F +P +N+ SWT +ISG Q+GK
Sbjct: 96 AKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKG 155
Query: 235 RQALSLFNEMRRARVG-LDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVS 293
+A S+F EMRR RV LD + L + + ACA + G+ +H
Sbjct: 156 LEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVH----------------- 198
Query: 294 LNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------- 343
NALI MYA C ++ A +F +M+ R+ VSWTS+I G A+ G A++AL
Sbjct: 199 -GNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHG 257
Query: 344 -----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEA 398
+TF+G++ ACSH GFV++GR+ F+ M +++GI+P ++HY C++DL R+GL+DEA
Sbjct: 258 VKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEA 317
Query: 399 FSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYA 458
+L+ MP P++ +LL C+ ++ ++A LV+ + + Y+ L++N+YA
Sbjct: 318 ENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYI-LLSNIYA 376
Query: 459 AAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITM 518
+A W V+ R+K+ +M VRK PG S V++ F AG++++ I++ L ++
Sbjct: 377 SASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEE 436
Query: 519 QA-MQEGYKPDISELFLGIEE 538
+ ++ GY PD S + ++E
Sbjct: 437 EMRIRNGYVPDTSWILHDMDE 457
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 148/306 (48%), Gaps = 24/306 (7%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H I++ ++ + + L+ Y G L +A VF+ +T W M+ G+A+S
Sbjct: 63 QVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSG 122
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E+++ L++ + K Y+++ L+S + G E V + R
Sbjct: 123 RKEEALELFRILPVKNL----YSWTALISGFVQSGKGLEAFSVFTEMRRE--------RV 170
Query: 158 NLMNLYLMSG--GECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
++++ ++S G C A + A V N+L+ Y K D+ A IF M H
Sbjct: 171 DILDPLVLSSIVGACANLAASI------AGRQVHGNALIDMYAKCSDVIAAKDIFSRMRH 224
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
R+VVSWT++I G AQ+G++ +AL+L+++M V ++V V + AC+ +G ++ G+ +
Sbjct: 225 RDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGREL 284
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFA 334
+ +++ G P L L+ + G ++EA + M + +W ++++
Sbjct: 285 FQSMTKDY--GIRPSLQHY-TCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACK 341
Query: 335 KQGYAQ 340
+QG Q
Sbjct: 342 RQGRGQ 347
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 45/283 (15%)
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQAL-SLFNEMRRARVGLDQVALVAALSACAEIGDLKL 271
MPHR+ ++W ++++ Q S + L + + + D A + ACA +G +
Sbjct: 1 MPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDH 60
Query: 272 GKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMIT 331
G+ +H + F V + ++L+ MYA CG + A VF ++ +NT+SWT+M++
Sbjct: 61 GRQVHCH----FIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVS 116
Query: 332 GFAKQGYAQEALLTF--LGVLSACSH----GGFVDEGRQ------FFE------------ 367
G+AK G +EAL F L V + S GFV G+ F E
Sbjct: 117 GYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPL 176
Query: 368 --------CMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAV-LGSLL 418
C N I R H ++D++++ + A + M+ D V SL+
Sbjct: 177 VLSSIVGACANLAASIAGRQVHGNALIDMYAKCSDVIAAKDIFSR--MRHRDVVSWTSLI 234
Query: 419 LGCRIHNNAELASQVAQKLVAE-IDPEQAAGYLALVANVYAAA 460
+G H AE A + +V+ + P + + V +YA +
Sbjct: 235 VGMAQHGQAEKALALYDDMVSHGVKPNE----VTFVGLIYACS 273
>gi|110738388|dbj|BAF01120.1| hypothetical protein [Arabidopsis thaliana]
Length = 596
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 163/512 (31%), Positives = 273/512 (53%), Gaps = 59/512 (11%)
Query: 25 SLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTA 84
++ ++R++ FQ H+ I+ G ++ L++ Y +SG A ++F+ E+
Sbjct: 113 AVFKLRDSNP--FQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVV 170
Query: 85 IWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRV 144
W MI G R+ + +++ + +M +E T +L + R G VHG
Sbjct: 171 TWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLY 230
Query: 145 LASGYCS-NVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDI 203
L +G +VFI ++L+++Y G+C +DD
Sbjct: 231 LETGRVKCDVFIGSSLVDMY----GKCSC------YDD---------------------- 258
Query: 204 DGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSAC 263
A K+FDEMP RNVV+WT +I+G Q+ + + +F EM ++ V ++ L + LSAC
Sbjct: 259 --AQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSAC 316
Query: 264 AEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNT 323
A +G L G+ +H Y+ +N S+ + + LI +Y CG +EEA VF ++ +N
Sbjct: 317 AHVGALHRGRRVHCYMIKN-SI---EINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNV 372
Query: 324 VSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFEC 368
+WT+MI GFA GYA++A +TF+ VLSAC+HGG V+EGR+ F
Sbjct: 373 YTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLS 432
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAE 428
M + ++ + +HY CMVDLF R GL++EA +L++ MPM+P + V G+L C +H + E
Sbjct: 433 MKGRFNMELKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYE 492
Query: 429 LASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
L A +++ ++ P + Y L+AN+Y+ ++ W +VA VR++M V K PG SW++
Sbjct: 493 LGKYAASRVI-KLQPSHSGRY-TLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIE 550
Query: 489 INGVLHDFVAGDSTYK-QASLIYKTLGEITMQ 519
+ G L +F+A D ++ +YKTL + +Q
Sbjct: 551 VKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQ 582
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 162/506 (32%), Positives = 264/506 (52%), Gaps = 56/506 (11%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H Q + FS++ LL Y G L +A + FEK + W +I + R
Sbjct: 676 LHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGL 735
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
+ ++ L+ +M K PD Y+ + +L CA +G VH +IR N
Sbjct: 736 YDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHN-----------YIRKN 784
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
M L L P N+L+ Y K G ++ A+ +F ++P +++
Sbjct: 785 NMALCL------------------PVS-----NALMDMYAKCGSMEEAYLVFSQIPVKDI 821
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
VSW TMI G ++N +AL LF EM++ D + + L AC + L++G+ IH
Sbjct: 822 VSWNTMIGGYSKNSLPNEALKLFAEMQKESRP-DGITMACLLPACGSLAALEIGRGIHGC 880
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ N G L + NALI MY CG + A +F + ++ ++WT MI+G G
Sbjct: 881 ILRN---GYSSEL-HVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGL 936
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
EA+ +TF +L ACSH G ++EG FF M ++P++EHY
Sbjct: 937 GNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYA 996
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
CMVDL +R G + +A++L++ MP+KP+ + G+LL GCRIH++ ELA +VA+ V E++P
Sbjct: 997 CMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEH-VFELEP 1055
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
+ AGY L+AN+YA A++W++V +R+++ K G++K PG SW+++ G FV+ D+ +
Sbjct: 1056 DN-AGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAH 1114
Query: 504 KQASLIYKTLGEITMQAMQEGYKPDI 529
QA I+ L + ++ EG+ P +
Sbjct: 1115 PQAKSIFSLLNNLRIKMKNEGHSPKM 1140
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 136/440 (30%), Positives = 215/440 (48%), Gaps = 65/440 (14%)
Query: 25 SLLQIRNTTKTLFQ---IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKT-EN 80
S+LQ+ K L + +HS I NG + + AKL+ YV+ G L ++F+ +
Sbjct: 456 SILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSD 515
Query: 81 PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
+WN M+ +A+ +S+YL+K+M + YT+S +L A G E +++
Sbjct: 516 NKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRI 575
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKR 200
HG V G+ S +VV NSL+ Y K
Sbjct: 576 HGCVYKLGFGS--------------------------------YNTVV--NSLIATYFKS 601
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
G++D A K+FDE+ R+VVSW +MISGC NG S AL F +M RVG+D LV ++
Sbjct: 602 GEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSV 661
Query: 261 SACAEIGDLKLGKWIHSY-VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
+ACA +G L LG+ +H V+ FS RE V NN L+ MY+ CG + +A F KM
Sbjct: 662 AACANVGSLSLGRALHGQGVKACFS--RE---VMFNNTLLDMYSKCGNLNDAIQAFEKMG 716
Query: 320 RRNTVSWTSMITGFAKQGYAQEALLTF---------------LGVLSACSHGGFVDEGRQ 364
++ VSWTS+I + ++G +A+ F VL AC+ G +D+GR
Sbjct: 717 QKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRD 776
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
+ +N + + ++D++++ G M+EA+ + +P+K D V + ++G
Sbjct: 777 VHNYIRKN-NMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVK--DIVSWNTMIGGYSK 833
Query: 425 NNAELASQVAQKLVAEIDPE 444
N+ A KL AE+ E
Sbjct: 834 NS---LPNEALKLFAEMQKE 850
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 192/425 (45%), Gaps = 59/425 (13%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH + GF N ++ L+A Y SG + +AHK+F++ + WN MI G +
Sbjct: 574 RIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNG 633
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++ + QM+ D T ++ CA G G +HG+ + + + V
Sbjct: 634 FSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNN 693
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L+++Y +CG + A F+ M ++VVSW SL+ YV+ G D A ++F EM +
Sbjct: 694 TLLDMY----SKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESK 749
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
V D ++ + L ACA L G+ +H
Sbjct: 750 GVSP-------------------------------DVYSMTSVLHACACGNSLDKGRDVH 778
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+Y+ +N + + ++NAL+ MYA CG +EEAY VF ++ ++ VSW +MI G++K
Sbjct: 779 NYIRKN----NMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKN 834
Query: 337 GYAQEAL--------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
EAL +T +L AC ++ GR C+ +N G +
Sbjct: 835 SLPNEALKLFAEMQKESRPDGITMACLLPACGSLAALEIGRGIHGCILRN-GYSSELHVA 893
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLL-GCRIHNNAELASQVAQKL-VAE 440
++D++ + G + A L +P K D + ++++ GC +H A QK+ +A
Sbjct: 894 NALIDMYVKCGSLVHARLLFDMIPEK--DLITWTVMISGCGMHGLGNEAIATFQKMRIAG 951
Query: 441 IDPEQ 445
I P++
Sbjct: 952 IKPDE 956
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 16/143 (11%)
Query: 205 GAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACA 264
GA+ DE T I + G R A+ L +++ LD A + L CA
Sbjct: 414 GAFAKLDE---------NTKICKFCEVGDLRNAVELLRMSQKSE--LDLNAYSSILQLCA 462
Query: 265 EIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTV 324
E L+ GK +HS + N P+ L L+ MY SCG + E +F + N V
Sbjct: 463 EHKCLQEGKMVHSVISSNGI----PIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKV 518
Query: 325 S-WTSMITGFAKQGYAQEALLTF 346
W M++ +AK G +E++ F
Sbjct: 519 FLWNLMMSEYAKIGDYRESIYLF 541
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 159/514 (30%), Positives = 269/514 (52%), Gaps = 60/514 (11%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
I + NG +++ L+ YV L +AH++F++ + W MI +++ +
Sbjct: 35 ICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKI 94
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
+K++ L M+ P+ YTYS SV C + +H ++ G S+V++R+
Sbjct: 95 HQKALELLVLMLRDGVRPNVYTYS---SVLRACNGMSDVRMLHCGIIKEGLESDVYVRSA 151
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
L++++ K G+ + A +FDEM +
Sbjct: 152 LIDVF----------------------------------AKLGEPEDALSVFDEMVTGDA 177
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
+ W ++I G AQN +S AL LF M+RA +Q L + L AC + L+LG H +
Sbjct: 178 IVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVH 237
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ V + L+ LNNAL+ MY CG +E+A VF +M+ R+ ++W++MI+G A+ GY
Sbjct: 238 I-----VKYDQDLI-LNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGY 291
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
+QEAL +T +GVL ACSH G +++G +F M + +GI P EHYG
Sbjct: 292 SQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYG 351
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
CM+DL +AG +D+A L+ M +P+ +LL CR+ N LA A+K++A +DP
Sbjct: 352 CMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIA-LDP 410
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
E A Y L +N+YA +++W V +R++M +G++K PG SW+++N +H F+ GD ++
Sbjct: 411 EDAGTYTVL-SNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFIIGDESH 469
Query: 504 KQASLIYKTLGEITMQAMQEGYKPDISELFLGIE 537
Q + K L ++ + + GY P+ + + +E
Sbjct: 470 PQIVEVNKKLNQLIHRLIGIGYVPETNFVLQDLE 503
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 137/309 (44%), Gaps = 44/309 (14%)
Query: 25 SLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTA 84
S+L+ N + +H II G Y+ + L+ + G +A VF++
Sbjct: 119 SVLRACNGMSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAI 178
Query: 85 IWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRV 144
+WN +I G A++ + ++ L+K+M ++ T + +L C L G Q H +
Sbjct: 179 VWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHI 238
Query: 145 LASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDID 204
+ Y ++ + L+++Y G + AR +F+ M R V++W++++
Sbjct: 239 VK--YDQDLILNNALVDMYCKCG---SLEDARRVFNQMKERDVITWSTMI---------- 283
Query: 205 GAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACA 264
SG AQNG S++AL LF M+ + + + +V L AC+
Sbjct: 284 ---------------------SGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACS 322
Query: 265 EIGDLKLGKWIHSYVEENFSV--GREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RR 321
G L+ G + +++ + + GRE +I + G++++A + +M+
Sbjct: 323 HAGLLEDGWYYFRSMKKLYGINPGREHY-----GCMIDLLGKAGKLDDAVKLLNEMECEP 377
Query: 322 NTVSWTSMI 330
+ V+W +++
Sbjct: 378 DAVTWRTLL 386
>gi|297741017|emb|CBI31329.3| unnamed protein product [Vitis vinifera]
Length = 753
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 188/597 (31%), Positives = 292/597 (48%), Gaps = 84/597 (14%)
Query: 6 IIPANPATSSKALTTRQIFSLLQIRNTTKTLF---QIHSQIIINGFSQKNYILAKLLAFY 62
+I + +++S+ L I SLL K+L Q+H II GF Q ++ KL+ FY
Sbjct: 86 LIRLHASSASQDLIVHPISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFY 145
Query: 63 VTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYS 122
L++AH + E + WN +I + R+ +K++ YKQM+ K PD +TY
Sbjct: 146 SAFNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYP 205
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCS---------------------NVFIRTNLMN 161
+L C G++VH + AS Y S N+ I +
Sbjct: 206 SVLKACGEELDLGFGKEVHESINASLYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAG 265
Query: 162 LYLMSGG------------ECG-----------VGCARLLFDDMPARSVVSW-------- 190
YL +G +CG +G + D + + S+
Sbjct: 266 GYLRTGNYKGALELLSQMRKCGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGE 325
Query: 191 -----NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
N+L+ Y + D+ A+ +F M +++++W ++ISGC +S +A L EM
Sbjct: 326 VDTVKNALITMYSRCKDLKHAYLLFQLMEAKSLITWNSIISGCCHMDRSEEASFLLREML 385
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYV--EENFSVGREPVLVSLNNALIHMYA 303
+ + V + + L CA + +L+ GK H Y+ E+F ++ +L L NAL+ MYA
Sbjct: 386 LFGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDF---KDHLL--LWNALVDMYA 440
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLG 348
G++ EA VF + R+ +++TSMI G+ QG Q AL +T +
Sbjct: 441 RSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIA 500
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
VLSACSH G V +G+ FE M +G+ P +EH+ CM DLF RAGL+++A +++NMP K
Sbjct: 501 VLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYK 560
Query: 409 PNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAA 468
P A+ +L+ CRIH N E+ A+KL+ E+ PE GY L+AN+YAAA W +A
Sbjct: 561 PTPAMWATLIGACRIHRNTEIGEWAAEKLL-EMKPEN-PGYYVLIANMYAAAGCWNKLAK 618
Query: 469 VRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGY 525
VR M +GVRK PG +WV + F+ D++ A IY L +TM + GY
Sbjct: 619 VRIFMRDLGVRKAPGCAWVDVGTGFSPFLVDDTSNANADEIYPLLEGLTMVMKEAGY 675
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 170/554 (30%), Positives = 276/554 (49%), Gaps = 64/554 (11%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
M +EEI+P N T L T L++ QIHSQII F Y+ + L+
Sbjct: 464 MQIEEIVP-NQYTYPSILKTCIRLGDLELGE------QIHSQIIKTSFQLNAYVCSVLID 516
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y G L A + + W MI G+ + +K++ ++QM+D+ DE
Sbjct: 517 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 576
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLF 179
+ +S CA +EG+Q+H + SG+ S++ + L+ LY +CG + A L F
Sbjct: 577 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY----SKCGNIEEAYLAF 632
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
+ A ++WN+L+ G+ Q+G + +AL
Sbjct: 633 EQTEAGDNIAWNALVSGF-------------------------------QQSGNNEEALR 661
Query: 240 LFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
+F M R + + +A+ A +E ++K GK +H+ + + V NA+I
Sbjct: 662 VFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVC----NAII 717
Query: 300 HMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------L 344
MYA CG I +A F ++ +N VSW +MI ++K G+ EAL +
Sbjct: 718 SMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHV 777
Query: 345 TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQN 404
T +GVLSACSH G VD+G ++FE MN +G+ P+ EHY C+VD+ +RAGL+ A +
Sbjct: 778 TLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILE 837
Query: 405 MPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQ 464
MP++P+ V +LL C +H N E+ A L+ E++PE +A Y+ L++N+YA ++W
Sbjct: 838 MPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLL-ELEPEDSATYV-LLSNLYAVCRKWD 895
Query: 465 DVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEG 524
RQKM + GV+K PGQSW+++ +H F GD + A I++ ++T +A + G
Sbjct: 896 ARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFKDLTKRASEIG 955
Query: 525 YKPDISELFLGIEE 538
Y D L +++
Sbjct: 956 YVQDCFSLLSELQQ 969
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 193/453 (42%), Gaps = 93/453 (20%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++HSQI+ GF + KLL FY+ G L A KVF++ + WN+MI+ A
Sbjct: 89 KLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKELASRS 148
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCG--LFREGEQVHGRVLASGYCSNVFI 155
K L+ +M+++ P+E T+S +L C R G F EQ+H R++ G
Sbjct: 149 LSGKVFCLFGRMVNENVTPNEGTFSGVLEAC-RGGSVAFDVVEQIHARIIYQGL------ 201
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
+S + N L+ Y + G +D A ++FD +
Sbjct: 202 ----------------------------GKSTIVCNPLIDLYSRNGFVDRARRVFDGLYL 233
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
++ SW MISG ++N +A+ LF +M + A + LSAC +I L++G+ +
Sbjct: 234 KDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 293
Query: 276 HSYV-EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
H V + FS + NAL+ +Y G + A +F M +R+ V++ ++I G +
Sbjct: 294 HGLVLKLGFSSD-----TYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLS 348
Query: 335 KQGYAQEALL---------------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
+ GY ++A+ T ++ ACS G + G+Q G
Sbjct: 349 QCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQ-LHAYTTKLGFASND 407
Query: 380 EHYGCMVDLFSRA----------------------------GLMDE---AFSLVQNMPMK 408
+ G +++L+++ GL+D+ +F + + M ++
Sbjct: 408 KIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIE 467
Query: 409 ---PNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
PN S+L C + EL Q+ +++
Sbjct: 468 EIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 500
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 167/382 (43%), Gaps = 58/382 (15%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH++II G + + L+ Y +G++ A +VF+ + W MI G +++E
Sbjct: 191 QIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNE 250
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ L+ M P Y +S +LS C + GEQ+HG VL G+ S+ ++
Sbjct: 251 CEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 310
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L++LY G + A +F +M R V++N
Sbjct: 311 ALVSLYFHLG---SLISAEHIFSNMSQRDAVTYN-------------------------- 341
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
T+I+G +Q G +A+ LF M+ + D L + + AC+ G L G+ +H+
Sbjct: 342 -----TLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHA 396
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA--- 334
Y + + + AL+++YA C +IE A F + + N V W M+ +
Sbjct: 397 YTTKLGFASNDKI----EGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLD 452
Query: 335 ---------KQGYAQEAL---LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+Q +E + T+ +L C G ++ G Q +Q ++ Y
Sbjct: 453 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH---SQIIKTSFQLNAY 509
Query: 383 GC--MVDLFSRAGLMDEAFSLV 402
C ++D++++ G +D A+ ++
Sbjct: 510 VCSVLIDMYAKLGKLDTAWDIL 531
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 134/360 (37%), Gaps = 96/360 (26%)
Query: 116 PDEYTYSFLLSVCARC-GLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGC 174
P+ T +LL C + G EG ++H ++L G+ +N + L++ YL G G
Sbjct: 65 PNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDG--- 121
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
A +FD+MP R++ +WN ++K R + +F M + NV SG
Sbjct: 122 ALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSG------- 174
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
+ R V D V + A + I+ +G+ ++
Sbjct: 175 -----VLEACRGGSVAFDVVEQIHA-------------RIIYQ------GLGKSTIVC-- 208
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------- 343
N LI +Y+ G ++ A VF + ++ SW +MI+G +K EA+
Sbjct: 209 -NPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGI 267
Query: 344 ----LTFLGVLSACS-----------------------------------HGGFVDEGRQ 364
F VLSAC H G +
Sbjct: 268 MPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEH 327
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP---MKPNDAVLGSLLLGC 421
F M+Q + Y +++ S+ G ++A L + M ++P+ L SL++ C
Sbjct: 328 IFSNMSQRDAVT-----YNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVAC 382
>gi|297846320|ref|XP_002891041.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336883|gb|EFH67300.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 586
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 165/482 (34%), Positives = 265/482 (54%), Gaps = 33/482 (6%)
Query: 36 LFQIHSQIIINGFSQKNYILAKLLAFYVTS-GYLINAHKVFEKTENPSTAIWNQMIRGHA 94
L Q+ S +I++G S +++ KLL F L A +F++ P+T ++ ++ G++
Sbjct: 40 LKQVQSFLIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTGYS 99
Query: 95 RSETPEKS--VYLYKQMIDKE-TEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCS 151
S S ++ M+++ P+ + Y +L VH + SG+
Sbjct: 100 SSLPLHASSAFSFFRLMVNRSFPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHL 159
Query: 152 NVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFD 211
V ++T L++ Y S + AR LFD+M R+VVSW ++L GY + GDI A +F+
Sbjct: 160 YVVVQTALLHSYASSVSH--ITLARQLFDEMSERNVVSWTAMLSGYARSGDIFNAVALFE 217
Query: 212 EMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM-RRARVGLDQVALVAALSACAEIGDLK 270
EMP R+V SW +++ C QNG +A+SLF M + ++V LV LSACA+ G L+
Sbjct: 218 EMPERDVPSWNAILAACTQNGLFVEAVSLFRRMINDPCIRPNEVTLVCVLSACAQTGTLQ 277
Query: 271 LGKWIHSYV-EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSM 329
L K IH++ N S V VS N+L+ +Y CG +EEA VF+ +++ +W SM
Sbjct: 278 LAKGIHAFAYRRNLS---SDVFVS--NSLVDLYGKCGNLEEASSVFKMSSKKSLTAWNSM 332
Query: 330 ITGFAKQGYAQEAL------------------LTFLGVLSACSHGGFVDEGRQFFECMNQ 371
I FA G ++EA+ +TF+G+L+AC+HGG V +GR +F+ M +
Sbjct: 333 INCFALHGRSEEAIAVFEDMMKLNSHDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMKK 392
Query: 372 NWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELAS 431
+GI+PRIEHYGC++DL RAG DEA + M M+ ++A+ GSLL C+ + + +LA
Sbjct: 393 RFGIEPRIEHYGCLIDLLGRAGQFDEALETMSTMKMEADEAIWGSLLNACKKYGHLDLAE 452
Query: 432 QVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQING 491
+ LVA ++P GY+A++AN+Y W++ R+ + KPPG S ++I+
Sbjct: 453 VAVKNLVA-LNPNN-GGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSQIEIDN 510
Query: 492 VL 493
L
Sbjct: 511 KL 512
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 181/531 (34%), Positives = 272/531 (51%), Gaps = 79/531 (14%)
Query: 38 QIHSQIIING-FSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
Q+H I +G F + + LL Y I+A K F++ +P+ I M G+ R+
Sbjct: 110 QLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYVRN 169
Query: 97 ETPEKSVYLYKQMI--DKETEPDEYTYSFLLSVCAR---CGLFREGEQVHGRVLASGYCS 151
S+ L++++I T DE S AR CG+ +H V+ +G
Sbjct: 170 NLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGIT---SSLHALVVKTGL-- 224
Query: 152 NVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRG--DIDGAWKI 209
G+ GV N++L Y K G D+ A K+
Sbjct: 225 ---------------DGDAGV-----------------VNTMLDAYAKGGRRDLGAARKV 252
Query: 210 FDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR--ARVGLDQVALVAALSACAEIG 267
FD M ++VVSW +MI+ AQNG S AL L+ +M + + V L A L ACA G
Sbjct: 253 FDTM-EKDVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAG 311
Query: 268 DLKLGKWIHSYV-----EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRN 322
++ GK IH+ V EEN VG +++ MY+ CG +E A F+K++ +N
Sbjct: 312 TIQTGKCIHNQVVRMGLEENVYVG---------TSVVDMYSKCGRVEMARKAFQKIKEKN 362
Query: 323 TVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFE 367
+SW++MITG+ G+ QEAL +TF+ VL+ACSH G +D+GR ++
Sbjct: 363 ILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGRYWYN 422
Query: 368 CMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNA 427
M + +GI+P +EHYGCMVDL RAG +DEA+ L++ M +KP+ A+ G+LL CRIH N
Sbjct: 423 AMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRIHKNV 482
Query: 428 ELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWV 487
ELA A++L E+D GY L++N+YA A W+DV +R + G+ KPPG S V
Sbjct: 483 ELAEISAKRLF-ELDATN-CGYYVLLSNIYAEAGMWKDVERMRVLVKTRGIEKPPGYSSV 540
Query: 488 QINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++ G H F GD ++ Q IY LG++ + + GY P+ + ++E
Sbjct: 541 ELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEKMQEAGYVPNTGSVLHDLDE 591
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 62/136 (45%)
Query: 2 LVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAF 61
L +++ + + A+T I T +T IH+Q++ G + Y+ ++
Sbjct: 282 LYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDM 341
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
Y G + A K F+K + + W+ MI G+ ++++ ++ +M P+ T+
Sbjct: 342 YSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITF 401
Query: 122 SFLLSVCARCGLFREG 137
+L+ C+ GL +G
Sbjct: 402 ISVLAACSHAGLLDKG 417
>gi|357484833|ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514039|gb|AES95662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 572
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 174/535 (32%), Positives = 282/535 (52%), Gaps = 61/535 (11%)
Query: 23 IFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKTEN 80
+F+LL N + Q+H+ ++ G + ++ L+A + G + A +F + +
Sbjct: 2 LFTLLH-NNHMEEFKQVHAHVLKCGIFFDTFCMSNLVATCALTKWGSMDYACSIFTQIDE 60
Query: 81 PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
PS+ +N MIRG+ E+++ LY MI++ EPD++TY F+L C+ G+ EG QV
Sbjct: 61 PSSFDYNTMIRGNVNDMKLEEALLLYVDMIERGVEPDKFTYPFVLKACSLLGVVDEGIQV 120
Query: 141 HGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVK 199
HG V G +V ++ +L+N+Y G+CG + A +F+ M +SV SW++++
Sbjct: 121 HGHVFKMGLEGDVIVQNSLINMY----GKCGEIKNACDVFNGMDEKSVASWSAII----- 171
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM-RRARVGLDQVALVA 258
GA H V W + L L +M R +++ LV
Sbjct: 172 -----GA--------HACVEMWN-------------ECLMLLGKMSSEGRCRVEESTLVN 205
Query: 259 ALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM 318
LSAC +G LGK IH + N S + V + +LI MY G +E+ VF+ M
Sbjct: 206 VLSACTHLGSPDLGKCIHGILLRNIS----ELNVVVKTSLIDMYVKSGCLEKGLRVFKNM 261
Query: 319 QRRNTVSWTSMITGFAKQGYAQEALLTF---------------LGVLSACSHGGFVDEGR 363
+N S+T MI+G A G +EAL F +GV SACSH G V+EG
Sbjct: 262 SEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGVFSACSHAGLVEEGL 321
Query: 364 QFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRI 423
Q F+ M I+P ++HYGCMVDL R G++ EA+ L+++M +KPND + SLL C++
Sbjct: 322 QCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIKPNDVIWRSLLSACKV 381
Query: 424 HNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPG 483
H+N E+ A+ L ++ + YL L AN+YA A++W DVA +R K+ + + + PG
Sbjct: 382 HHNLEIGKIAAENLFM-LNQNNSGDYLVL-ANMYAKAQKWDDVAKIRTKLAERNLVQTPG 439
Query: 484 QSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
S ++ ++ FV+ D + Q ++IY+ + ++ Q EGY PD S++ L +++
Sbjct: 440 FSLIEAKRKVYKFVSQDKSIPQWNIIYEMIHQMEWQLKFEGYIPDTSQVLLDVDD 494
>gi|357445603|ref|XP_003593079.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360447|gb|ABN08457.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355482127|gb|AES63330.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 558
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 176/556 (31%), Positives = 283/556 (50%), Gaps = 93/556 (16%)
Query: 19 TTRQIFSLLQIRNTTKT---LFQIHSQIIINGFSQK------NYILAKLLAFYVTSGYLI 69
+T I L Q N K L QIH+ + + Q N +L ++L F L
Sbjct: 6 STFSILPLNQFLNNAKNISHLKQIHA-LFLKHLPQNAPHHFFNRLLFRVLHFSAEKSNLY 64
Query: 70 NAHKVFEKTENPSTA-IWNQMIRGHARSETPE-KSVYLYKQMIDKETEPDEYTYSFLLSV 127
AHK+F+ N S IW +IR T + + +M K P +T+S +L+
Sbjct: 65 YAHKLFDTMPNCSNCFIWTSLIRAFLSHHTHFCHCISTFARMHQKGILPSGFTFSLVLNA 124
Query: 128 CARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGEC----------------- 170
C R EG+QVH R++ SG+ N ++T L+++Y G C
Sbjct: 125 CGRVPAGFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGHVCDARDVFDGIVDRDVVAW 184
Query: 171 -GVGC----------ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVV 219
+ C AR LFD+M R+ +W +++ GY GD+ A +++D M ++ V
Sbjct: 185 TAMICGYAKAGRMVDARFLFDNMGERNSFTWTTMVAGYANYGDMKAAMELYDVMNGKDEV 244
Query: 220 SWTTMISG-------------------------------C-AQNGKSRQALSLFNEMRRA 247
+W MI+G C AQNG +R+A+ ++ +MRRA
Sbjct: 245 TWVAMIAGYGKLGNVSEARRIFDEITVPWNPSTCAALLACYAQNGHAREAIEMYEKMRRA 304
Query: 248 RVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGE 307
++ + VA+V A+SACA++ D+++ + +EE F V +NALIHM + CG
Sbjct: 305 KIKVTDVAMVGAISACAQLRDIRMSNSLTYNIEEGFCEKTHIV----SNALIHMQSKCGN 360
Query: 308 IEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSA 352
I+ A+ F M+ R+ ++++MI FA+ G +Q+A+ +TF+GVL+A
Sbjct: 361 IDLAWREFNIMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLKPNQVTFVGVLNA 420
Query: 353 CSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDA 412
CS G ++EG +FF+ M + +GI+P EHY CMVDL RAG +++A+SL++ +
Sbjct: 421 CSTSGLIEEGCRFFQIMTEMYGIEPLPEHYTCMVDLLGRAGQLEKAYSLIKENSTSADAT 480
Query: 413 VLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQK 472
GSLL CR++ N EL ++A + + EIDP + Y+ L+AN YA+ +W+ V++
Sbjct: 481 TWGSLLAACRVYGNVELG-EIAARHLFEIDPTDSGNYV-LLANTYASNDKWECAEEVKKL 538
Query: 473 MIKMGVRKPPGQSWVQ 488
M K G++KP G SW+Q
Sbjct: 539 MSKKGMKKPSGYSWIQ 554
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 170/506 (33%), Positives = 263/506 (51%), Gaps = 55/506 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H+ I G + LL Y G + A ++F+ N W MI +A+S
Sbjct: 150 EVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSG 209
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ L QM + +P+ TY +L+ CA G + ++VH L +G +V + T
Sbjct: 210 NGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGT 269
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+ +Y K G ID A +FD M R+
Sbjct: 270 ALVQMY----------------------------------AKSGSIDDARVVFDRMKVRD 295
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VVSW MI A++G+ +A LF +M+ D + ++ L+ACA G L+ K IH
Sbjct: 296 VVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHR 355
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
+ G E V V + AL+HMY+ G I++A VF +M+ RN VSW +MI+G A+ G
Sbjct: 356 HA---LDSGLE-VDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHG 411
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
Q+AL +TF+ VLSACSH G VDEGR + M Q +GI+P + H
Sbjct: 412 LGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHC 471
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
CMVDL RAG + EA + NM + P++A G+LL CR + N EL VA++ + ++D
Sbjct: 472 NCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERL-KLD 530
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P+ AA Y+ L++N+YA A +W V+ VR M + G+RK PG+SW++++ +HDF+ DS+
Sbjct: 531 PKNAATYV-LLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSS 589
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPD 528
+ + I ++ ++ + EGY PD
Sbjct: 590 HPECKEINESKDKVIEKIKAEGYIPD 615
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 201/438 (45%), Gaps = 58/438 (13%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H II + Q +++ LL Y+ G L A VF+ S A WN MI G+ +
Sbjct: 49 QVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHK 108
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E ++ L+++M + +P+ TY +L CA + G++VH + G S+V + T
Sbjct: 109 HAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGT 168
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L+ +Y G+CG + AR +FD++ ++SW
Sbjct: 169 ALLRMY----GKCGSINEARRIFDNLMNHDIISW-------------------------- 198
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
T MI AQ+G ++A L +M + + + V+ L+ACA G LK K +H
Sbjct: 199 -----TVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVH 253
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+ G E + V + AL+ MYA G I++A VF +M+ R+ VSW MI FA+
Sbjct: 254 RHA---LDAGLE-LDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEH 309
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G EA + FL +L+AC+ G ++ ++ + G++ +
Sbjct: 310 GRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHR-HALDSGLEVDVRV 368
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE- 440
+V ++S++G +D+A + M ++ N +++ G H + A +V +++ A
Sbjct: 369 GTALVHMYSKSGSIDDARVVFDRMKVR-NVVSWNAMISGLAQHGLGQDALEVFRRMTAHG 427
Query: 441 IDPEQAAGYLALVANVYA 458
+ P++ L A +A
Sbjct: 428 VKPDRVTFVAVLSACSHA 445
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 126/295 (42%), Gaps = 37/295 (12%)
Query: 17 ALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFE 76
A+T I + K + ++H + G + L+ Y SG + +A VF+
Sbjct: 230 AITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFD 289
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
+ + WN MI A ++ L+ QM + +PD + +L+ CA G
Sbjct: 290 RMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEW 349
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKG 196
+++H L SG +V + T L+++Y SG + AR++FD M R+VVSWN+
Sbjct: 350 VKKIHRHALDSGLEVDVRVGTALVHMYSKSG---SIDDARVVFDRMKVRNVVSWNA---- 402
Query: 197 YVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVAL 256
MISG AQ+G + AL +F M V D+V
Sbjct: 403 ---------------------------MISGLAQHGLGQDALEVFRRMTAHGVKPDRVTF 435
Query: 257 VAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEA 311
VA LSAC+ G + G+ Y+ G EP VS N ++ + G + EA
Sbjct: 436 VAVLSACSHAGLVDEGR--SQYLAMTQVYGIEPD-VSHCNCMVDLLGRAGRLMEA 487
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 142/322 (44%), Gaps = 62/322 (19%)
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCA 175
D + Y +L C + +QVH ++ S N + NL+++Y+ ECG + A
Sbjct: 27 DSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYI----ECGRLQEA 82
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVV--SWTTMISGCAQNGK 233
R +FD + +S SWN+++ GYV+ + A ++F EM H V + T MI
Sbjct: 83 RCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMI-------- 134
Query: 234 SRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVS 293
L ACA + LK GK +H+ + G V
Sbjct: 135 -------------------------ILKACASLSALKWGKEVHACIRH----GGLESDVR 165
Query: 294 LNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------- 343
+ AL+ MY CG I EA +F + + +SWT MI +A+ G +EA
Sbjct: 166 VGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEG 225
Query: 344 -----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEA 398
+T++ +L+AC+ G + ++ + G++ + +V +++++G +D+A
Sbjct: 226 FKPNAITYVSILNACASEGALKWVKRVHR-HALDAGLELDVRVGTALVQMYAKSGSIDDA 284
Query: 399 FSLVQNMPMKPNDAVLGSLLLG 420
+ MK D V ++++G
Sbjct: 285 RVVFDR--MKVRDVVSWNVMIG 304
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 170/516 (32%), Positives = 261/516 (50%), Gaps = 56/516 (10%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+HS G ++ ++L L++ Y G + +A +F+ E P +N +I G++ +
Sbjct: 234 VHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGM 293
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
SV L+ +++ P+ T L+ V + G + +HG VL SG+ +N + T
Sbjct: 294 VGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTA 353
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
+ L+ + D++ A K FD MP + +
Sbjct: 354 ITTLH----------------------------------CRLNDMESARKAFDTMPEKTM 379
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
SW MISG AQNG + A++LF +M + V + + + + LSACA++G L LGKW+H
Sbjct: 380 ESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRI 439
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ E EP V + ALI MYA CG I EA +F M +N VSW +MI G+ G
Sbjct: 440 ITEE---DLEPN-VYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQ 495
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
EAL TFL VL ACSHGG V+EG + F M ++ I P IEH
Sbjct: 496 GAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCT 555
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKP-NDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
CMVDL RAG + EAF L+ P V G+LL C +H +++LA +QKL E+D
Sbjct: 556 CMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLF-ELD 614
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
PE +GY L++N++ + K++ + A VRQ+ + K PG + ++I H F+AGD
Sbjct: 615 PEN-SGYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRA 673
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ Q+ IY L ++T + ++ GY+P+ +EE
Sbjct: 674 HPQSEAIYSYLEKLTAKMIEAGYRPETEAALYDVEE 709
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 176/425 (41%), Gaps = 61/425 (14%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H+ + G++ ++ + L Y + +A KVF+ +P T +WN ++ G + SE
Sbjct: 136 LHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGSEA 195
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
E + + D PD T + +L A G VH G + + T
Sbjct: 196 VES---FARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTG 252
Query: 159 LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L++LY +CG V AR LFD M +V++N+L+ GY
Sbjct: 253 LISLY----SKCGDVESARCLFDMMEKPDLVAYNALISGY-------------------- 288
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+ NG +++LF E+ + + LVA + + G L + +H
Sbjct: 289 -----------SVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHG 337
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
+V ++ PV + A+ ++ ++E A F M + SW +MI+G+A+ G
Sbjct: 338 FVLKSGFTANSPV----STAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNG 393
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+ A+ +T LSAC+ G + G+ + + ++P +
Sbjct: 394 LTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEE-DLEPNVYVM 452
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV-AEI 441
++D++++ G + EA + M K N +++ G +H A ++ + ++ A +
Sbjct: 453 TALIDMYAKCGSISEARRIFNTMDNK-NVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHL 511
Query: 442 DPEQA 446
P A
Sbjct: 512 LPTSA 516
>gi|125543615|gb|EAY89754.1| hypothetical protein OsI_11297 [Oryza sativa Indica Group]
Length = 648
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 160/450 (35%), Positives = 242/450 (53%), Gaps = 25/450 (5%)
Query: 55 LAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKET 114
++ +++ + G + A KVF+ E W MI R+ +++ L+ M +
Sbjct: 203 VSSMVSLFGRRGMVDEARKVFDGVERKDVFTWTAMISCFQRNGKFAEALALFSDMRGEGW 262
Query: 115 EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGC 174
DE +++ CAR + R GE HG +G S + ++ L+++Y V
Sbjct: 263 PVDEAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMY---SSFLNVVA 319
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
AR LFD SWNS++ GY+K G + A ++F MP ++ VSWTTMISGC QN +S
Sbjct: 320 ARRLFDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQS 379
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
+AL++FN M+ + D+V LV+ +SAC + L+ GK +H Y+ E+ + + V L
Sbjct: 380 SEALTIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIREH----QYTITVIL 435
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------- 343
+LI MY CG +E A VF M+ R T W ++I G A G ++L
Sbjct: 436 GTSLIDMYMKCGCLESALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSST 495
Query: 344 -----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEA 398
+TF GVLSAC H G V+EG+ FF+ M + I P I HYGCMVDL RAG + EA
Sbjct: 496 ATPNEITFTGVLSACRHAGLVEEGQHFFKLMQHKYHIIPNIRHYGCMVDLLGRAGYVKEA 555
Query: 399 FSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYA 458
+L+++MPM P+ G+LL C H + E+ +V +KLV +DP G+ +++N+YA
Sbjct: 556 ENLIESMPMSPDVPAWGALLGSCWKHGDNEVGERVGRKLV-NLDPHH-DGFHTMLSNIYA 613
Query: 459 AAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
+ WQ V +R M + V K PG S V+
Sbjct: 614 SEGMWQHVKDLRGSMKQWHVPKIPGSSVVE 643
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/470 (24%), Positives = 207/470 (44%), Gaps = 94/470 (20%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLI----NAHK 73
LT + + L ++ + L QIH+Q + +G + ++L+ F ++ L ++ +
Sbjct: 2 LTVTLLDAHLARCSSARHLLQIHAQFVASGLLADAFAASRLILFTTSTRLLPLPFHHSLR 61
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGL 133
+ P+ N +++ P + LY M PD YT++ L + CA
Sbjct: 62 LLHVVHRPNAFSCNMVLKAAREHGLPHLCLPLYASM---SAAPDCYTHTILAAACATRRA 118
Query: 134 FREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNS 192
EG QVH + G+ N+++ LM++Y CG +G AR +FD P VSWN+
Sbjct: 119 IEEGRQVHCHAVRHGFGRNLYLANALMSMY----SACGCLGDARKVFDAGPVWDAVSWNT 174
Query: 193 LLKGYV-------------------------------KRGDIDGAWKIFDEMPHRNVVSW 221
+L YV +RG +D A K+FD + ++V +W
Sbjct: 175 ILAAYVQAEDVDQAVGVFARMPERGAAAVSSMVSLFGRRGMVDEARKVFDGVERKDVFTW 234
Query: 222 TTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE 281
T MIS +NGK +AL+LF++MR +D+ +V ++ACA + + G+ H
Sbjct: 235 TAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACARLEVTRNGEMCHGLA-- 292
Query: 282 NFSVGREPVLVSLNNALIHMYAS---------------C----------------GEIEE 310
F G L ++ NALIHMY+S C G +++
Sbjct: 293 -FRAGLGSRL-NVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKD 350
Query: 311 AYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSH 355
A +F M ++ VSWT+MI+G + + EAL +T + V+SAC++
Sbjct: 351 AKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTN 410
Query: 356 GGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
+++G+ E + ++ I ++D++ + G ++ A + M
Sbjct: 411 MSSLEQGKSMHEYIREHQYTITVILGTS-LIDMYMKCGCLESALEVFDTM 459
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 126/294 (42%), Gaps = 10/294 (3%)
Query: 47 GFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLY 106
G + + L+ Y + ++ A ++F+ + WN MI G+ ++ + + + L+
Sbjct: 296 GLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKDAKELF 355
Query: 107 KQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYL-M 165
M DK D +++ ++S C + E + + A G + ++++ M
Sbjct: 356 TVMPDK----DNVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTNM 411
Query: 166 SGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMI 225
S E G + + +V+ SL+ Y+K G ++ A ++FD M R W +I
Sbjct: 412 SSLEQGKSMHEYIREHQYTITVILGTSLIDMYMKCGCLESALEVFDTMEERGTPCWNAVI 471
Query: 226 SGCAQNGKSRQALSLFNEMRRARVGL-DQVALVAALSACAEIGDLKLGKWIHSYVEENFS 284
G A NG ++L +F+EM + +++ LSAC G ++ G+ ++ +
Sbjct: 472 VGLAMNGLVMKSLDMFSEMESSSTATPNEITFTGVLSACRHAGLVEEGQHFFKLMQHKYH 531
Query: 285 VGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTV-SWTSMITGFAKQG 337
+ + ++ + G ++EA + M V +W +++ K G
Sbjct: 532 IIPN---IRHYGCMVDLLGRAGYVKEAENLIESMPMSPDVPAWGALLGSCWKHG 582
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 163/516 (31%), Positives = 274/516 (53%), Gaps = 55/516 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH+ + G +++ L+ Y SG + A +F + A WN M+ G+ S
Sbjct: 1029 QIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSG 1088
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
K++ LY M + ++ T + ++G+Q+ V+ G+ ++F+ +
Sbjct: 1089 DFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVIS 1148
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
++++YL K G+++ A +IF+E+P +
Sbjct: 1149 GVLDMYL----------------------------------KCGEMESARRIFNEIPSPD 1174
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
V+WTTMISGC +NG+ AL ++ MR ++V D+ + AC+ + L+ G+ IH+
Sbjct: 1175 DVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHA 1234
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
+ + +P +++ +L+ MYA CG IE+A G+F++ SW +MI G A+ G
Sbjct: 1235 NTVK-LNCAFDPFVMT---SLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHG 1290
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
A+EAL +TF+GVLSACSH G V E + F M + +GI+P IEHY
Sbjct: 1291 NAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHY 1350
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
C+VD SRAG + EA ++ +MP + + ++ +LL CR+ + E +VA+KL+A ++
Sbjct: 1351 SCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLA-LE 1409
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P +A Y+ L++NVYAAA +W++VA+ R M K V+K PG SWV + +H FVAGD +
Sbjct: 1410 PSDSAAYV-LLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRS 1468
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+++ +IY + I + +EGY PD + +EE
Sbjct: 1469 HEETDVIYNKVEYIMKRIREEGYLPDTDFALVDVEE 1504
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 178/430 (41%), Gaps = 75/430 (17%)
Query: 40 HSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI--WNQMIRGHARSE 97
H++I+ +G ++ L+ Y G L +A K+F+ T + S + WN ++ HA +
Sbjct: 649 HARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHA--D 706
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+L++ + +T + + +C E +HG + G +VF+
Sbjct: 707 KARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAG 766
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH-- 215
L+N+Y G + AR+LFD M R VV WN ++K YV G A +F E
Sbjct: 767 ALVNIYAKFGR---IREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTG 823
Query: 216 ---------------------------------------------RNVVSWTTMISGCAQ 230
+V++W +S Q
Sbjct: 824 LRPDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQ 883
Query: 231 NGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPV 290
G++ +A+ F +M +RV D + V LS A + L+LGK IH V + G + V
Sbjct: 884 RGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRS---GLDQV 940
Query: 291 LVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------- 343
VS+ N LI+MY G + A VF +M + VSW +MI+G A G + ++
Sbjct: 941 -VSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLL 999
Query: 344 --------LTFLGVLSACSH-GGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGL 394
T VL ACS GG Q C + G+ ++D++S++G
Sbjct: 1000 RGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKA-GVVLDSFVSTTLIDVYSKSGK 1058
Query: 395 MDEAFSLVQN 404
M+EA L N
Sbjct: 1059 MEEAEFLFVN 1068
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 154/354 (43%), Gaps = 60/354 (16%)
Query: 86 WNQMIRGH-ARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRV 144
WN+ + R ET E +V + MI+ D T+ +LSV A G+Q+HG V
Sbjct: 874 WNKTLSWFLQRGETWE-AVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIV 932
Query: 145 LASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDID 204
+ SG V + L+N+Y VK G +
Sbjct: 933 VRSGLDQVVSVGNCLINMY----------------------------------VKTGSVS 958
Query: 205 GAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACA 264
A +F +M ++VSW TMISGCA +G ++ +F ++ R + DQ + + L AC+
Sbjct: 959 RARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACS 1018
Query: 265 EI-GDLKLGKWIHSYVEENFSVGREPVLVS-LNNALIHMYASCGEIEEAYGVFRKMQRRN 322
+ G L IH+ ++ VL S ++ LI +Y+ G++EEA +F +
Sbjct: 1019 SLGGGCHLATQIHA-----CAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFD 1073
Query: 323 TVSWTSMITGFAKQGYAQEALLTFLGVL-------------SACSHGGFV--DEGRQFFE 367
SW +M+ G+ G +AL ++ + +A + GG V +G+Q +
Sbjct: 1074 LASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQ-IQ 1132
Query: 368 CMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGC 421
+ G + ++D++ + G M+ A + +P P+D +++ GC
Sbjct: 1133 AVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIP-SPDDVAWTTMISGC 1185
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 46/214 (21%)
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMP--ARSVVSWNSL 193
G++ H R+L SG+ + F+ NL+ +Y +CG + AR LFD P +R +V+WN++
Sbjct: 645 GKRAHARILTSGHHPDRFLTNNLITMY----SKCGSLSSARKLFDTTPDTSRDLVTWNAI 700
Query: 194 LKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQ 253
L + K+R LF +RR+ V +
Sbjct: 701 LSAHAD---------------------------------KARDGFHLFRLLRRSFVSATR 727
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGRE-PVLVSLNNALIHMYASCGEIEEAY 312
L C + +H Y +G + V V+ AL+++YA G I EA
Sbjct: 728 HTLAPVFKMCLLSASPSAAESLHGYA---VKIGLQWDVFVA--GALVNIYAKFGRIREAR 782
Query: 313 GVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
+F M R+ V W M+ + G EALL F
Sbjct: 783 VLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLF 816
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 287 bits (735), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 164/516 (31%), Positives = 268/516 (51%), Gaps = 57/516 (11%)
Query: 39 IHSQIIINGFSQKNYILAKLLA-FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+H+ ++ + F + +L ++ Y G L +A ++F++ W +I G +++
Sbjct: 109 VHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNN 168
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
P ++ L+ QM+ +P+ +T S LL G Q+H L GY S+V++ +
Sbjct: 169 RPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGS 228
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y + G +D A FD MP ++
Sbjct: 229 ALVDMY----------------------------------ARCGHMDAAQLAFDGMPTKS 254
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VSW +ISG A+ G+ AL L +M+R + SACA IG L+ GKW+H+
Sbjct: 255 EVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHA 314
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
++ ++ G + ++ + N L+ MYA G I++A VF ++ + + VSW +M+TG A+ G
Sbjct: 315 HMIKS---GLK-LIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHG 370
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+E L ++FL VL+ACSH G +DEG +FE M + + ++P + HY
Sbjct: 371 LGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHY 429
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
VDL R GL+D A ++ MP++P AV G+LL CR+H N EL A++ E+D
Sbjct: 430 VTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAF-ELD 488
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P + G L++N+YA+A RW+DVA VR+ M + GV+K P SWV+I +H FVA D T
Sbjct: 489 PHDS-GPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDET 547
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ Q I EI+ + + GY PD S + L +++
Sbjct: 548 HPQIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQ 583
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 161/357 (45%), Gaps = 59/357 (16%)
Query: 116 PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLM-NLYLMSGGECG-VG 173
PD YS LL C R G +G VH ++ S + N + N++ N+Y +CG +
Sbjct: 85 PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMY----AKCGCLD 140
Query: 174 CARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGK 233
AR +FD+MP + +V+W T +I+G +QN +
Sbjct: 141 DARRMFDEMPTKDMVTW-------------------------------TALIAGFSQNNR 169
Query: 234 SRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVS 293
R AL LF +M R + + L + L A L G +H++ G + V
Sbjct: 170 PRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFC---LKYGYQSS-VY 225
Query: 294 LNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------- 343
+ +AL+ MYA CG ++ A F M ++ VSW ++I+G A++G + AL
Sbjct: 226 VGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKN 285
Query: 344 -----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEA 398
T+ V SAC+ G +++G+ M ++ G+K ++D++++AG +D+A
Sbjct: 286 FQPTHFTYSSVFSACASIGALEQGKWVHAHMIKS-GLKLIAFIGNTLLDMYAKAGSIDDA 344
Query: 399 FSLVQNMPMKPNDAVLGSLLLGCRIHN-NAELASQVAQKLVAEIDPEQAAGYLALVA 454
+ + +KP+ ++L GC H E + Q L I+P + + L A
Sbjct: 345 KRVFDRL-VKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTA 400
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 34/235 (14%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H+ + G+ Y+ + L+ Y G++ A F+ S WN +I GHAR
Sbjct: 210 QLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKG 269
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E +++L +M K +P +TYS + S CA G +G+ VH ++ SG FI
Sbjct: 270 EGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGN 329
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y +G + A+ +FD + VVSWN
Sbjct: 330 TLLDMYAKAG---SIDDAKRVFDRLVKPDVVSWN-------------------------- 360
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
TM++GCAQ+G ++ L F +M R + ++++ + L+AC+ G L G
Sbjct: 361 -----TMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEG 410
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 287 bits (735), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 167/516 (32%), Positives = 260/516 (50%), Gaps = 55/516 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIHS + GF Y+ L+ Y G+L A +V E + W MI G+ + E
Sbjct: 366 QIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHE 425
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+ ++ +K+M PD + +S CA R+G Q+H R+ SGY +V I
Sbjct: 426 CCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSI-- 483
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
WN+L+ Y + G I A+ F+EM ++
Sbjct: 484 --------------------------------WNALVNLYARCGRIREAFSSFEEMELKD 511
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
++ ++SG AQ+G +AL +F M ++ V + V+ALSA A + ++K GK IH+
Sbjct: 512 GITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHA 571
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
V G + NALI +Y CG E+A F +M RN VSW ++IT ++ G
Sbjct: 572 RV---IKTG-HSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHG 627
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
EAL +TF+GVL+ACSH G V+EG +F+ M+ +GI+PR +HY
Sbjct: 628 RGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHY 687
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
C++D+F RAG +D A ++ MP+ + V +LL C++H N E+ A+ L+ E++
Sbjct: 688 ACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLL-ELE 746
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P +A Y+ L++N YA ++W + VR+ M GVRK PG+SW+++ V+H F GD
Sbjct: 747 PHDSASYV-LLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRL 805
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ A IY L I + + GYK + LF E+
Sbjct: 806 HPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQ 841
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 176/386 (45%), Gaps = 54/386 (13%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH++ + G + + L+ Y +G ++ A +VFE+ W M+ G+A++
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E+++ LY+QM P Y S +LS C + LF +G +H + G+CS +F+
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
++ LYL G A +F DMP R V++N+L+ G+ + G + A +IF+EM
Sbjct: 183 AVITLYLRCG---SFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEM---- 235
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
SG + D V + + L+ACA +GDL+ G +HS
Sbjct: 236 ------QFSGLSP---------------------DCVTISSLLAACASLGDLQKGTQLHS 268
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y+ F G + + +L+ +Y CG++E A +F R N V W M+ F +
Sbjct: 269 YL---FKAGISSDYI-MEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQIN 324
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
++ T+ +L C+ +D G Q ++ G + +
Sbjct: 325 DLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHS-LSVKTGFESDMYVS 383
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMK 408
G ++D++S+ G +++A +++ + K
Sbjct: 384 GVLIDMYSKYGWLEKARRVLEMLKEK 409
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 140/303 (46%), Gaps = 40/303 (13%)
Query: 31 NTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMI 90
N + QIH++I ++G+S I L+ Y G + A FE+ E N ++
Sbjct: 460 NAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLV 519
Query: 91 RGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYC 150
G A+S E+++ ++ +M + + +T+ LS A ++G+Q+H RV+ +G+
Sbjct: 520 SGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHS 579
Query: 151 SNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKI 209
+ L++LY G+CG A++ F +M R+ VSWN
Sbjct: 580 FETEVGNALISLY----GKCGSFEDAKMEFSEMSERNEVSWN------------------ 617
Query: 210 FDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDL 269
T+I+ C+Q+G+ +AL LF++M++ + + V + L+AC+ +G +
Sbjct: 618 -------------TIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLV 664
Query: 270 KLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTS 328
+ G + + + + P + +I ++ G+++ A +M + + W +
Sbjct: 665 EEGLSYFKSMSDEYGIRPRPDHYA---CVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRT 721
Query: 329 MIT 331
+++
Sbjct: 722 LLS 724
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 86/216 (39%), Gaps = 29/216 (13%)
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
M R S ++G + + LSLF + R GL + AL AC G
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGR---- 56
Query: 273 KW-----IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
+W IH+ +G+ + + N LI +Y+ G + A VF ++ R+ VSW
Sbjct: 57 RWQVVPEIHAKAVTR-GLGKYRI---VGNLLIDLYSKNGLVLPARRVFEELSARDNVSWV 112
Query: 328 SMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQN 372
+M++G+A+ G +EAL VLS+C+ +GR
Sbjct: 113 AMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGR-LIHAQGYK 171
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
G I ++ L+ R G A + +MP +
Sbjct: 172 HGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHR 207
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 167/516 (32%), Positives = 260/516 (50%), Gaps = 56/516 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH + GF I L+ Y G L A +F+ + WN MI + ++E
Sbjct: 257 EIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNE 316
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
P++++ ++++M+D+ +P + + L CA G G +H
Sbjct: 317 NPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIH---------------- 360
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
+L + R+V NSL+ Y K ++D A +F ++ R
Sbjct: 361 ------------------KLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRT 402
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+VSW MI G AQNG+ +AL+ F++M+ V D V+ ++A AE+ KWIH
Sbjct: 403 IVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHG 462
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
V N + + V + AL+ MYA CG I A +F M R+ +W +MI G+ G
Sbjct: 463 VVMRN-CLDKN---VFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG 518
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+ AL +TFL V+SACSH G V+ G + F M +N+ I+P ++HY
Sbjct: 519 IGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHY 578
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
G MVDL RAG ++EA+ + MP+KP V G++L C+IH N A +VA++L E++
Sbjct: 579 GAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLF-ELN 637
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
PE GY L+AN+Y AA W+ V VR M++ G+RK PG S V+I +H F +G +
Sbjct: 638 PED-GGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTA 696
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ + IY L ++ Q + GY PD + L LG+E+
Sbjct: 697 HPSSKKIYAFLEKLICQIKEAGYVPD-TNLILGLED 731
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 192/411 (46%), Gaps = 63/411 (15%)
Query: 7 IPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSG 66
IPAN AL + SL ++R+ +F+ NG Q++ KL++ + G
Sbjct: 31 IPANVYEHPAALLLERCSSLKELRHILPLIFK-------NGLYQEHLFQTKLVSLFCRYG 83
Query: 67 YLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLS 126
+ A +VFE + ++ M++G A+ +K++ + +M D E EP Y +++LL
Sbjct: 84 SVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLK 143
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGEC-GVGCARLLFDDMPAR 185
VC R G+++HG ++ SG+ ++F T L N+Y +C V AR +FD MP R
Sbjct: 144 VCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMY----AKCRQVHEARKVFDRMPER 199
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
+VSWN+++ GY +QNG +R AL + N M
Sbjct: 200 DLVSWNTIVAGY-------------------------------SQNGMARMALEMVNLMC 228
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC 305
+ + +V+ L A + + +++GK IH Y G + LV++ AL+ MYA C
Sbjct: 229 EENLKPSFITIVSVLPAVSALRLIRIGKEIHGYA---MRAGFDS-LVNIATALVDMYAKC 284
Query: 306 GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF---------------LGVL 350
G ++ A +F M RN VSW SMI + + +EA++ F +G L
Sbjct: 285 GSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGAL 344
Query: 351 SACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
AC+ G ++ GR F ++ + + ++ ++ + +D A S+
Sbjct: 345 HACADLGDLERGR-FIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASM 394
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 167/505 (33%), Positives = 269/505 (53%), Gaps = 27/505 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H Q+I N Y+ + ++ Y G A +VF + ++ W +I G +
Sbjct: 312 QLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYG 371
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+SV L+ QM + D++ + L+S C G Q+H L SG+ V +
Sbjct: 372 CFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSN 431
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
+L+++Y +CG + A L+F+ M R +VSW ++ Y + G+I A + FD+M R
Sbjct: 432 SLISMY----AKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTR 487
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRAR-VGLDQVALVAALSACAEIGDLKLGKWI 275
NV++W M+ Q+G L ++++M + V D V V CA+IG KLG I
Sbjct: 488 NVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQI 547
Query: 276 HSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
+ VG + S+ NA+I MY+ CG I EA F + R++ VSW +MITG+++
Sbjct: 548 ---IGHTVKVGL-ILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQ 603
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
G ++A+ ++++ VLS CSH G V+EG+ +F+ M ++ I P +E
Sbjct: 604 HGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLE 663
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
H+ CMVDL RAG + EA +L+ MPMKP V G+LL C+ H N +LA ++A K + +
Sbjct: 664 HFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNDLA-ELAAKHLFD 722
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
+D + GY+ L+A +YA A + D A VR+ M G++K PG SW+++N +H F A D
Sbjct: 723 LDSPGSGGYM-LLAKMYADAGKSDDSAQVRKLMRDKGIKKSPGYSWMEVNNRVHVFKAED 781
Query: 501 STYKQASLIYKTLGEITMQAMQEGY 525
++ Q I + L E+ + GY
Sbjct: 782 VSHPQVIAIREKLDELMEKIAHLGY 806
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 145/286 (50%), Gaps = 8/286 (2%)
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDK-ETEPDEYT 120
Y G L +A ++F + A WN ++ G+ +S ++ ++ M ++ P+ +T
Sbjct: 102 YAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFT 161
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFD 180
+ ++ C G Q+ G + + ++T L+++ + G + A F
Sbjct: 162 FGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGA---MDFASKQFS 218
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSL 240
+ +++ NS+L GY K +D A +IF MP R+VVSW +IS +++G+ R+AL +
Sbjct: 219 RIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDM 278
Query: 241 FNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIH 300
+M V D ++L+ACA + L+ GK +H V N +P + S A++
Sbjct: 279 VVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLP-HIDPYVAS---AMVE 334
Query: 301 MYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
+YA CG +EA VF ++ RN+VSWT +I GF + G E++ F
Sbjct: 335 LYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELF 380
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 134/288 (46%), Gaps = 44/288 (15%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
+L Y S + +A ++F+ WN +I ++S +++ + M K PD
Sbjct: 231 MLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPD 290
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGC--- 174
TY+ L+ CAR G+Q+H +V+ + + ++ + ++ LY +C GC
Sbjct: 291 STTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELY----AKC--GCFKE 344
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
A+ +F + R+ VSW L+ G++ Q G
Sbjct: 345 AKRVFSSLRDRNSVSWTVLIGGFL-------------------------------QYGCF 373
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
+++ LFN+MR + +DQ AL +S C D+ LG +HS ++ G +V +
Sbjct: 374 SESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKS---GHTRAVV-V 429
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEA 342
+N+LI MYA CG ++ A +F M R+ VSWT MIT +++ G +A
Sbjct: 430 SNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKA 477
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 162/366 (44%), Gaps = 59/366 (16%)
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCAR-LLFDDMP 183
L C +H R++ G S VF++ L++ YL G + AR LL D++
Sbjct: 32 LRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGA---LSDARNLLRDEIT 88
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
+V++ N ++ GY K G + A ++F MP R+V SW T++SG Q+G+ AL +F
Sbjct: 89 EPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVS 148
Query: 244 MRRARVGL-DQVALVAALSACAEIG----------------------------DLKLGKW 274
MR+ L + + +C +G D+ +
Sbjct: 149 MRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCG 208
Query: 275 IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFA 334
+ + FS + P ++ N+ L+ YA ++ A +F+ M R+ VSW +I+ +
Sbjct: 209 AMDFASKQFSRIKNPTIICRNSMLVG-YAKSHGVDHALEIFKSMPERDVVSWNMVISALS 267
Query: 335 KQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRI 379
K G +EAL T+ L+AC+ ++ G+Q + +N P I
Sbjct: 268 KSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNL---PHI 324
Query: 380 EHY--GCMVDLFSRAGLMDEA---FSLVQNMPMKPNDAVLGSLL-LGCRIHNNAELASQV 433
+ Y MV+L+++ G EA FS +++ ++G L GC + EL +Q+
Sbjct: 325 DPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGC-FSESVELFNQM 383
Query: 434 AQKLVA 439
+L+A
Sbjct: 384 RAELMA 389
>gi|15226158|ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101013|sp|P93011.1|PP182_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33760
gi|1707020|gb|AAC69141.1| hypothetical protein [Arabidopsis thaliana]
gi|330253787|gb|AEC08881.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 150/524 (28%), Positives = 277/524 (52%), Gaps = 59/524 (11%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGH 93
K L Q+H+ +I+ G+ + +L KL+ ++ + H +F P ++N +I+
Sbjct: 23 KQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKST 82
Query: 94 ARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNV 153
++ P V Y++M+ P YT++ ++ CA R G+ VH + SG+ +
Sbjct: 83 SKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDT 142
Query: 154 FIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
+++ L+ Y K GD++GA ++FD M
Sbjct: 143 YVQAALVTFY----------------------------------SKCGDMEGARQVFDRM 168
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK 273
P +++V+W +++SG QNG + +A+ +F +MR + D V+ LSACA+ G + LG
Sbjct: 169 PEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGS 228
Query: 274 WIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF 333
W+H Y+ S G + + V L ALI++Y+ CG++ +A VF KM+ N +WT+MI+ +
Sbjct: 229 WVHQYI---ISEGLD-LNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAY 284
Query: 334 AKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
GY Q+A+ +TF+ VLSAC+H G V+EGR ++ M +++ + P
Sbjct: 285 GTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIP 344
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPM--KPNDAVLGSLLLG-CRIHNNAELASQVA 434
+EH+ CMVD+ RAG +DEA+ + + K L + +LG C++H N +L ++A
Sbjct: 345 GVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIA 404
Query: 435 QKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLH 494
++L+A ++P+ G+ +++N+YA + + +V+ +R M++ +RK G S +++ +
Sbjct: 405 KRLIA-LEPDN-PGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTY 462
Query: 495 DFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
F GD ++++ IY+ L + + + GY P E+ +EE
Sbjct: 463 MFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVEE 506
>gi|125603908|gb|EAZ43233.1| hypothetical protein OsJ_27833 [Oryza sativa Japonica Group]
Length = 567
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 160/464 (34%), Positives = 266/464 (57%), Gaps = 28/464 (6%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI-WNQMIRG 92
+T Q+H+Q + GF +++ LLA Y + +VF + + WN +I G
Sbjct: 112 RTGAQVHAQAVRRGFLADVFVVNALLAMYGALRDAASMREVFGSCAGVADVVSWNTVIGG 171
Query: 93 HARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSN 152
+ + E + K++ D+ + ++S ++ A G ++ R+ A G N
Sbjct: 172 YVKCGEMESA----KRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREMFDRMPAIG--RN 225
Query: 153 VFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDE 212
V +++ + G + AR +FD+MP R++VSWN++L+GY D+DGA ++FD
Sbjct: 226 VVTWNSMVTGFARHGL---LPLARKMFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDV 282
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR-RARVGLDQVALVAALSACAEIGDLKL 271
MP ++VVSWT MISG AQ G+ + L LF M+ + V ++V +V+ LSACA + L+
Sbjct: 283 MPEKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEE 342
Query: 272 GKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMIT 331
G+W+H++++++ V +L ALI MYA CG + A +F + R+N +W ++IT
Sbjct: 343 GRWVHAFIDKHKMVLNNEY--NLGAALIDMYAKCGRTDIAVKIFNSLDRKNVSAWNALIT 400
Query: 332 GFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIK 376
A G A++++ +TF+GVL+ACSHGG VDEGR+ F+ M G++
Sbjct: 401 RLAMNGNARDSVDAFEQMKRTGEKPNDITFVGVLTACSHGGLVDEGRRCFQSMASTCGVQ 460
Query: 377 PRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQK 436
P ++HYGCMVD+ RAGL++EA L+++MPM P+ V G+LL CR+H ++A +V +
Sbjct: 461 PEVKHYGCMVDMLGRAGLLEEAEELIRSMPMAPDVMVFGALLGACRMHKRFDVAERVQSE 520
Query: 437 LVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRK 480
+ + Q +G L++++YAAA +W DV RQ + + G+RK
Sbjct: 521 IHSLNLNAQQSGCHVLISDIYAAAGKWFDVLEARQVVQRSGIRK 564
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 177/361 (49%), Gaps = 37/361 (10%)
Query: 89 MIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLF-REGEQVHGRVLAS 147
+IR A S +P S + ++ PD +T LL + F R G QVH + +
Sbjct: 65 LIRASASSASPGLSFAAFSSLLRCGLVPDRFTLPPLLGSAGKLPAFPRTGAQVHAQAVRR 124
Query: 148 GYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPA-RSVVSWNSLLKGYVKRGDIDGA 206
G+ ++VF+ L+ +Y G R +F VVSWN+++ GYVK G+++ A
Sbjct: 125 GFLADVFVVNALLAMY---GALRDAASMREVFGSCAGVADVVSWNTVIGGYVKCGEMESA 181
Query: 207 WKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEI 266
++FDEMP RN VSW+TM+ G A G+ A +F+ M +G + V + ++ A
Sbjct: 182 KRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREMFDRM--PAIGRNVVTWNSMVTGFARH 239
Query: 267 GDLKLGKWIHSYVEENFSVGREPV--LVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTV 324
G L L + + + PV LVS NA++ Y+ +++ A +F M ++ V
Sbjct: 240 GLLPLARKMFDEM---------PVRNLVSW-NAMLRGYSVNSDMDGARELFDVMPEKDVV 289
Query: 325 SWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFEC 368
SWT MI+G+A+ G Q+ L +T + VLSAC++ ++EGR
Sbjct: 290 SWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAF 349
Query: 369 MNQNWGIKPRIEHYG-CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNA 427
++++ + + G ++D++++ G D A + ++ K N + +L+ ++ NA
Sbjct: 350 IDKHKMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSLDRK-NVSAWNALITRLAMNGNA 408
Query: 428 E 428
Sbjct: 409 R 409
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 155/490 (31%), Positives = 270/490 (55%), Gaps = 27/490 (5%)
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
G L + + + W +I ++R+ ++V +K M+ PDE T +L
Sbjct: 187 GMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVL 246
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDM-P 183
S CA+ G +H V G ++ + L+++Y +CG G A+ +FD +
Sbjct: 247 SACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMY----AKCGDFGHAQQVFDALGR 302
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
SWN+++ GY K G +D A +FDEM R+++++ +M++G +G+ R+AL LF
Sbjct: 303 GPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMS 362
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
MRR + +D +V L+ACA +G L+ G+ +H+ +E+ + L AL+ MY
Sbjct: 363 MRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEAD----IYLGTALLDMYM 418
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLG 348
CG ++EA VF++M +R+ +WT+MI G A G + AL ++++
Sbjct: 419 KCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIA 478
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
VL+ACSH ++EGR +F+ M + I P+IEHYGCM+DL R+GL+DEA LV+ MP++
Sbjct: 479 VLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQ 538
Query: 409 PNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAA 468
PN + S+L CR+H + +LA A+ L+ +++P++ Y+ L N+Y +++W++ +
Sbjct: 539 PNAVIWASILSACRVHKHIDLAQCAAEHLL-KLEPDEDGVYVQLY-NIYIDSRQWENASK 596
Query: 469 VRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
+R M + V+K G S + + G +H FV D ++ + I L EI+ + GY P
Sbjct: 597 IRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSLGYSPL 656
Query: 529 ISELFLGIEE 538
S++ + ++E
Sbjct: 657 TSQITVDVDE 666
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 185/391 (47%), Gaps = 61/391 (15%)
Query: 67 YLINAHKVFEKTENPSTAIWNQMIRGHARS-ETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
+L A +F++ PST +++ +R +R+ P + L+++M PD +T+ FL
Sbjct: 52 HLRYALHLFDRMP-PSTFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLF 110
Query: 126 SVCA---RCGLFREGEQVHGRVLASGYCSNV-FIRTNLMNLYLMSGGECGVGCARLLFDD 181
+ R +H L + S F+ +L+++Y+ G AR FD+
Sbjct: 111 KCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAAD---ARRAFDE 167
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
+ + V+W L+ G K G + + + P R+V+SWT++I+ ++ ++R+A+ F
Sbjct: 168 IHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCF 227
Query: 242 NEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHM 301
M + D+V ++A LSACA++ DL+LG+ +H VEE E ++V ALI M
Sbjct: 228 KTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVV----ALIDM 283
Query: 302 YASCGE--------------------------------IEEAYGVFRKMQRRNTVSWTSM 329
YA CG+ ++ A +F +M+ R+ +++ SM
Sbjct: 284 YAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSM 343
Query: 330 ITGFAKQGYAQEALLTFLG---------------VLSACSHGGFVDEGRQFFECMNQNWG 374
+TG+ G +EALL F+ +L+AC+ G + +GR C+ Q
Sbjct: 344 MTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRL- 402
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
++ I ++D++ + G +DEA + Q M
Sbjct: 403 VEADIYLGTALLDMYMKCGRVDEATIVFQRM 433
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 155/490 (31%), Positives = 270/490 (55%), Gaps = 27/490 (5%)
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
G L + + + W +I ++R+ ++V +K M+ PDE T +L
Sbjct: 187 GMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVL 246
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDM-P 183
S CA+ G +H V G ++ + L+++Y +CG G A+ +FD +
Sbjct: 247 SACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMY----AKCGDFGHAQQVFDALGR 302
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
SWN+++ GY K G +D A +FDEM R+++++ +M++G +G+ R+AL LF
Sbjct: 303 GPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMS 362
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
MRR + +D +V L+ACA +G L+ G+ +H+ +E+ + L AL+ MY
Sbjct: 363 MRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEAD----IYLGTALLDMYM 418
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLG 348
CG ++EA VF++M +R+ +WT+MI G A G + AL ++++
Sbjct: 419 KCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIA 478
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
VL+ACSH ++EGR +F+ M + I P+IEHYGCM+DL R+GL+DEA LV+ MP++
Sbjct: 479 VLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQ 538
Query: 409 PNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAA 468
PN + S+L CR+H + +LA A+ L+ +++P++ Y+ L N+Y +++W++ +
Sbjct: 539 PNAVIWASILSACRVHKHIDLAQCAAEHLL-KLEPDEDGVYVQLY-NIYIDSRQWENASK 596
Query: 469 VRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
+R M + V+K G S + + G +H FV D ++ + I L EI+ + GY P
Sbjct: 597 IRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSLGYSPL 656
Query: 529 ISELFLGIEE 538
S++ + ++E
Sbjct: 657 TSQITVDVDE 666
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 185/391 (47%), Gaps = 61/391 (15%)
Query: 67 YLINAHKVFEKTENPSTAIWNQMIRGHARS-ETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
+L A +F++ PST +++ +R +R+ P + L+++M PD +T+ FL
Sbjct: 52 HLRYALHLFDRMP-PSTFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLF 110
Query: 126 SVCA---RCGLFREGEQVHGRVLASGYCSNV-FIRTNLMNLYLMSGGECGVGCARLLFDD 181
+ R +H L + S F+ +L+++Y+ G AR FD+
Sbjct: 111 KCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAAD---ARRAFDE 167
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
+ + V+W L+ G K G + + + P R+V+SWT++I+ ++ ++R+A+ F
Sbjct: 168 IHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCF 227
Query: 242 NEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHM 301
M + D+V ++A LSACA++ DL+LG+ +H VEE E ++V ALI M
Sbjct: 228 KTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVV----ALIDM 283
Query: 302 YASCGE--------------------------------IEEAYGVFRKMQRRNTVSWTSM 329
YA CG+ ++ A +F +M+ R+ +++ SM
Sbjct: 284 YAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSM 343
Query: 330 ITGFAKQGYAQEALLTFLG---------------VLSACSHGGFVDEGRQFFECMNQNWG 374
+TG+ G +EALL F+ +L+AC+ G + +GR C+ Q
Sbjct: 344 MTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRL- 402
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
++ I ++D++ + G +DEA + Q M
Sbjct: 403 VEADIYLGTALLDMYMKCGRVDEATIVFQRM 433
>gi|115452665|ref|NP_001049933.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|108707812|gb|ABF95607.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548404|dbj|BAF11847.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|125586044|gb|EAZ26708.1| hypothetical protein OsJ_10614 [Oryza sativa Japonica Group]
Length = 648
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 160/450 (35%), Positives = 242/450 (53%), Gaps = 25/450 (5%)
Query: 55 LAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKET 114
++ +++ + G + A KVF+ E W MI R+ +++ L+ M +
Sbjct: 203 VSSMVSLFGRRGMVDEARKVFDVVERKDVFTWTAMISCFQRNGKFAEALALFSDMRGEGW 262
Query: 115 EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGC 174
DE +++ CAR + R GE HG +G S + ++ L+++Y V
Sbjct: 263 PVDEAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMY---SSFLNVVA 319
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
AR LFD SWNS++ GY+K G + A ++F MP ++ VSWTTMISGC QN +S
Sbjct: 320 ARRLFDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQS 379
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSL 294
+AL++FN M+ + D+V LV+ +SAC + L+ GK +H Y+ E+ + + V L
Sbjct: 380 SEALTIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIREH----QYTITVIL 435
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------- 343
+LI MY CG +E A VF M+ R T W ++I G A G ++L
Sbjct: 436 GTSLIDMYMKCGCLESALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSST 495
Query: 344 -----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEA 398
+TF GVLSAC H G V+EG+ FF+ M + I P I HYGCMVDL RAG + EA
Sbjct: 496 ATPNEITFTGVLSACRHAGLVEEGQHFFKLMQHKYHIIPNIRHYGCMVDLLGRAGYVKEA 555
Query: 399 FSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYA 458
+L+++MPM P+ G+LL C H + E+ +V +KLV +DP G+ +++N+YA
Sbjct: 556 ENLIESMPMSPDVPAWGALLGSCWKHGDNEVGERVGRKLV-NLDPHH-DGFHTMLSNIYA 613
Query: 459 AAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
+ WQ V +R M + V K PG S V+
Sbjct: 614 SEGMWQHVKDLRGSMKQWHVPKIPGSSVVE 643
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 117/470 (24%), Positives = 207/470 (44%), Gaps = 94/470 (20%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLI----NAHK 73
LT + + L ++ + L QIH+Q + +G + ++L+ F ++ L ++ +
Sbjct: 2 LTVTLLDAHLARCSSARHLLQIHAQFVASGLLADAFAASRLILFTTSTRLLPLPFHHSLR 61
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGL 133
+ P+ N +++ P + LY M PD YT++ L + CA
Sbjct: 62 LLHVVHRPNAFSCNMVLKAAREHGLPHLCLPLYASM---SAAPDCYTHTILAAACATRRA 118
Query: 134 FREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNS 192
EG QVH + G+ N+++ LM++Y CG +G AR +FD P VSWN+
Sbjct: 119 IEEGRQVHCHAVRHGFGRNLYLANALMSMY----SACGCLGDARKVFDAGPVWDAVSWNT 174
Query: 193 LLKGYV-------------------------------KRGDIDGAWKIFDEMPHRNVVSW 221
+L YV +RG +D A K+FD + ++V +W
Sbjct: 175 ILAAYVQAEDVDQAVGVFARMPERGAAAVSSMVSLFGRRGMVDEARKVFDVVERKDVFTW 234
Query: 222 TTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE 281
T MIS +NGK +AL+LF++MR +D+ +V ++ACA + + G+ H
Sbjct: 235 TAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACARLEVTRNGEMCHGLA-- 292
Query: 282 NFSVGREPVLVSLNNALIHMYAS---------------C----------------GEIEE 310
F G L ++ NALIHMY+S C G +++
Sbjct: 293 -FRAGLGSRL-NVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKD 350
Query: 311 AYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSH 355
A +F M ++ VSWT+MI+G + + EAL +T + V+SAC++
Sbjct: 351 AKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTN 410
Query: 356 GGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
+++G+ E + ++ I ++D++ + G ++ A + M
Sbjct: 411 MSSLEQGKSMHEYIREHQYTITVILGTS-LIDMYMKCGCLESALEVFDTM 459
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 126/294 (42%), Gaps = 10/294 (3%)
Query: 47 GFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLY 106
G + + L+ Y + ++ A ++F+ + WN MI G+ ++ + + + L+
Sbjct: 296 GLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKDAKELF 355
Query: 107 KQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYL-M 165
M DK D +++ ++S C + E + + A G + ++++ M
Sbjct: 356 TVMPDK----DNVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTNM 411
Query: 166 SGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMI 225
S E G + + +V+ SL+ Y+K G ++ A ++FD M R W +I
Sbjct: 412 SSLEQGKSMHEYIREHQYTITVILGTSLIDMYMKCGCLESALEVFDTMEERGTPCWNAVI 471
Query: 226 SGCAQNGKSRQALSLFNEMRRARVGL-DQVALVAALSACAEIGDLKLGKWIHSYVEENFS 284
G A NG ++L +F+EM + +++ LSAC G ++ G+ ++ +
Sbjct: 472 VGLAMNGLVMKSLDMFSEMESSSTATPNEITFTGVLSACRHAGLVEEGQHFFKLMQHKYH 531
Query: 285 VGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTV-SWTSMITGFAKQG 337
+ + ++ + G ++EA + M V +W +++ K G
Sbjct: 532 IIPN---IRHYGCMVDLLGRAGYVKEAENLIESMPMSPDVPAWGALLGSCWKHG 582
>gi|449451283|ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
gi|449519310|ref|XP_004166678.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
Length = 565
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 169/552 (30%), Positives = 287/552 (51%), Gaps = 82/552 (14%)
Query: 10 NPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLI 69
NP ++ ++ I +LL++ T L Q+H+ +I G Q ++++ + ++ + ++
Sbjct: 22 NPKSN---VSLYSISALLKLCKTHIDLHQVHAHLIQKGLEQDSFLVTQFISASNSVAHIS 78
Query: 70 NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
+ VF++ +PST +WN ++ G+ + LY +M ++ PD YT+ LL VCA
Sbjct: 79 YSTSVFDRVLSPSTFLWNSLVSGYCAKLQFVDIISLYVRMKREDGAPDRYTFPSLLKVCA 138
Query: 130 ----------------RCGL-----------------------------FREGEQVHGRV 144
RCG+ E V
Sbjct: 139 SEGKMMEGMALHGSILRCGVDEDIYVTTSLVNLYGKGGLIDCARKVFDGMSERNVVSWTA 198
Query: 145 LASGYCS-----------NVFIRTNLMNLYLMSGGECGVG---CARLLFDDMPARSVVSW 190
+ GY S ++ N+ + + GG +G A FD+MP ++VVS+
Sbjct: 199 MIVGYSSIGNLVEAKRLFDLMPERNVASWNAIIGGYMKMGDVKSAEKAFDEMPEKNVVSF 258
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG 250
+++ GY K GD+ A +F + P R++++W+ +ISG QNG+ +A+ F EM V
Sbjct: 259 TTMIDGYAKAGDMLSARNLFQKAPERDIIAWSALISGYTQNGQPNEAVKTFLEMSSRNVK 318
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEE 310
D+ L + + AC+++G+L L KW+ SY SV V+ ALI M A CG +E
Sbjct: 319 PDKFVLTSLMLACSQLGNLDLAKWVDSYATR-CSVDLRGAHVT--AALIDMNAKCGNMER 375
Query: 311 AYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSH 355
A +F KM +R+ +S+ S++ G + G+ +A+ + F +L+ACS
Sbjct: 376 AMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLFERMLGEDLTPDDVAFTVILTACSR 435
Query: 356 GGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLG 415
G VDEG +FE M + + P ++HY C+VDL SR+G + EA+ L++++P++ + G
Sbjct: 436 AGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWG 495
Query: 416 SLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIK 475
+LL C+++ ++ELA VA +L+ EI+PE A Y+ L++N+YAAA RW DV+AVR +M +
Sbjct: 496 ALLGACKLYCDSELAEVVASRLI-EIEPENAGNYV-LLSNIYAAADRWLDVSAVRNQMNE 553
Query: 476 MGVRKPPGQSWV 487
G+RK PG SW+
Sbjct: 554 RGLRKIPGCSWI 565
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 172/562 (30%), Positives = 280/562 (49%), Gaps = 71/562 (12%)
Query: 7 IPANPATSSK------------ALTTRQIFSLLQIRNTTKTLF---QIHSQIIINGFSQK 51
P++PA+S+ A T R S++ K L IH+ + + +
Sbjct: 35 FPSSPASSTGLRELDLLHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGD 94
Query: 52 NYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMID 111
++L L+ Y G + +A VF+K + W +I G+A++ P +++ L M+
Sbjct: 95 AFLLNSLIHMYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLR 154
Query: 112 KETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG 171
P+ +T++ LL CG GEQ+H + + +V++ + L+++Y
Sbjct: 155 ARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMY-------- 206
Query: 172 VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQN 231
C ++ D A +FD + +N VSW +I+G A+
Sbjct: 207 ARCEQM--------------------------DMAIMVFDRLVSKNEVSWNALIAGFARK 240
Query: 232 GKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL 291
L F EM+R G + SA A IG L+ G+W+H+++ ++ + +
Sbjct: 241 ADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKS----GQKLT 296
Query: 292 VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------- 343
+ N ++ MYA G + +A VF +M +R+ V+W +M+T A+ G +EA+
Sbjct: 297 AFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRK 356
Query: 344 -------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMD 396
+TFL VL+ACSHGG V EG+ +F+ M +++ ++P I+HY VDL RAGL+
Sbjct: 357 CGIQLNQITFLSVLTACSHGGLVKEGKHYFDMM-KDYNVQPEIDHYVSFVDLLGRAGLLK 415
Query: 397 EAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANV 456
EA V MPM+P AV G+LL CR+H NA++ Q A V E+DP+ G L+ N+
Sbjct: 416 EALIFVFKMPMEPTAAVWGALLGACRMHKNAKMG-QYAADHVFELDPDDT-GPPVLLYNI 473
Query: 457 YAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEI 516
YA+ +W D A VR+ M GV+K P SWVQI +H FVA D T+ ++ IY+ EI
Sbjct: 474 YASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEI 533
Query: 517 TMQAMQEGYKPDISELFLGIEE 538
M+ + GY P+ + + L I E
Sbjct: 534 NMRIKKAGYVPNTAHVLLHINE 555
>gi|357519199|ref|XP_003629888.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355523910|gb|AET04364.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 515
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 164/501 (32%), Positives = 271/501 (54%), Gaps = 34/501 (6%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKTENPSTAIWNQMIRGHAR 95
QIH+ I N ++ +YI +++LAF+ S G A +F NP+ +N +I +
Sbjct: 6 QIHAHAITNNLTRFSYISSRILAFFALSPRGDFRYAETLFTHIPNPNIFDYNSIITSYTT 65
Query: 96 SETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
+ K +++ +M++ P+ +T++ L+ C EQV + G S+V+
Sbjct: 66 NSQFHKLFFVFTKMLNTNIRPNSHTFTTLVKACVS---LSSLEQVFTLSMKLGNSSDVYF 122
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
++++N + + AR +FD+ R+VV W SL+ GY G ++ A +FD+MP
Sbjct: 123 VSSVINAF---SKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGLVNEARDVFDKMPL 179
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG-----LDQVALVAALSACAEIGDLK 270
RN S++ M+SG +NG + + LF E+++ G + LV+ L+AC +G +
Sbjct: 180 RNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNACTMVGAFE 239
Query: 271 LGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMI 330
GKWIHSYVEEN G E L L ALI Y CG ++ A VF KM ++ +W++MI
Sbjct: 240 EGKWIHSYVEEN---GLEYDL-ELGTALIDFYMKCGWVKGAEKVFNKMPVKDVATWSAMI 295
Query: 331 TGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGI 375
G A G + AL +TF+GVL+AC+H E + F M++ + I
Sbjct: 296 LGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESARLFGIMSEKYNI 355
Query: 376 KPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQ 435
P IEHYGC+VD+ +R+G + +A + + +M ++P+ A+ GSLL GC +H + EL +V +
Sbjct: 356 TPSIEHYGCVVDVLARSGQVKKALTFINSMHIEPDGAIWGSLLNGCLMHGHYELGQKVGK 415
Query: 436 KLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHD 495
L+ E +P+ + Y+ L+AN+YA +W+ V+ VR+ M GV G S+++I+ +H
Sbjct: 416 YLI-EFEPKHSGRYV-LLANMYANMGKWEGVSEVRKLMKDRGVMIVSGWSFIEIDQTIHK 473
Query: 496 FVAGDSTYKQASLIYKTLGEI 516
F A D + IY L +
Sbjct: 474 FFADDKCCLYSREIYDVLSHL 494
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 145/330 (43%), Gaps = 32/330 (9%)
Query: 19 TTRQIFSL-LQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEK 77
+ Q+F+L +++ N++ F +IN FS+ + I A +VF++
Sbjct: 103 SLEQVFTLSMKLGNSSDVYF---VSSVINAFSKHSAIHL--------------ARQVFDE 145
Query: 78 TENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
N + W ++ G+ ++ + + DK +E +YS ++S R G F EG
Sbjct: 146 CSNRNVVCWTSLVSGYCSCGLVNEA----RDVFDKMPLRNEASYSAMVSGYVRNGFFSEG 201
Query: 138 EQVHGRVLASGY-CS----NVFIRTNLMNLYLMSGG-ECGVGCARLLFDDMPARSVVSWN 191
Q+ + C+ N + +++N M G E G + ++ +
Sbjct: 202 VQLFRELKKKDKGCACLKFNGALLVSVLNACTMVGAFEEGKWIHSYVEENGLEYDLELGT 261
Query: 192 SLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL 251
+L+ Y+K G + GA K+F++MP ++V +W+ MI G A NG ++ AL LF +M +
Sbjct: 262 ALIDFYMKCGWVKGAEKVFNKMPVKDVATWSAMILGLAINGNNKMALELFEKMEKVGPKP 321
Query: 252 DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEA 311
++V V L+AC + + E +++ + ++ + A G++++A
Sbjct: 322 NEVTFVGVLTACNHKSLFGESARLFGIMSEKYNITPS---IEHYGCVVDVLARSGQVKKA 378
Query: 312 YGVFRKMQ-RRNTVSWTSMITGFAKQGYAQ 340
M + W S++ G G+ +
Sbjct: 379 LTFINSMHIEPDGAIWGSLLNGCLMHGHYE 408
>gi|56783979|dbj|BAD81434.1| pentatricopeptide (PPR) repeat-containing protein -like [Oryza
sativa Japonica Group]
Length = 503
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 154/416 (37%), Positives = 235/416 (56%), Gaps = 25/416 (6%)
Query: 139 QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARS-VVSWNSLLKGY 197
Q+H ++ +G+ ++ +L+ Y G V AR +FD+ A + VVSWN ++ GY
Sbjct: 96 QLHSLLVRAGHAADPHASASLVQAYCSCGS---VASARRVFDETAASADVVSWNVMIDGY 152
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
VK GD+ A ++FD MP RNVVSWT +I AQ + +A+ +F M+ + D VAL+
Sbjct: 153 VKSGDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALL 212
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
+ LSAC ++G + LG+W+H +V P++ NA+I MY CG +++A VF
Sbjct: 213 SVLSACGDLGVVDLGEWVHRFVLRRGLCQEIPLM----NAIIDMYVKCGSVKKALEVFEG 268
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEG 362
M++++ V+WT+MI GFA G EA+ +TFL VLS CSH G D G
Sbjct: 269 MEQKSIVTWTTMIAGFALHGLGLEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLG 328
Query: 363 RQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCR 422
R +F+ M + IKPR+EHYGCM+DL RAG + EA L+Q+MP K N A+ G+LL R
Sbjct: 329 RWYFKTMVSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAAR 388
Query: 423 IHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPP 482
H + EL Q L+ E++P + Y+ L++N+YA +RW V +R M G+R P
Sbjct: 389 THGDTELGEQALLHLI-ELEPHNSGNYI-LLSNIYAEQERWDAVRELRISMRDRGLRNVP 446
Query: 483 GQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
G S + ++G++H+F + D ++ I + L I G+ + E +EE
Sbjct: 447 GASSIDVDGMVHEFTSRDGSHPSLHKIREVLCAINSNIKSVGHIALLPESLHDVEE 502
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 127/291 (43%), Gaps = 43/291 (14%)
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
YV SG L A ++F+ + W +I +A+ + PE+++ ++++M + EPD
Sbjct: 152 YVKSGDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVAL 211
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFD 180
+LS C G+ GE VH VL G C + + ++++Y+ +CG V A +F+
Sbjct: 212 LSVLSACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYV----KCGSVKKALEVFE 267
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSL 240
M +S+V+W + MI+G A +G +A+ L
Sbjct: 268 GMEQKSIVTWTT-------------------------------MIAGFALHGLGLEAVEL 296
Query: 241 FNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIH 300
F M + V + + +A LS C+ +G LG+W + + + V +I
Sbjct: 297 FRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPR---VEHYGCMID 353
Query: 301 MYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQG---YAQEALLTFL 347
+ G + EA G+ + M + N W +++ G ++ALL +
Sbjct: 354 LLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTELGEQALLHLI 404
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 9/170 (5%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H ++ G Q+ ++ ++ YV G + A +VFE E S W MI G A
Sbjct: 230 VHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIVTWTTMIAGFALHGL 289
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
++V L+++M + P++ T+ +LSVC+ GL GR S I+
Sbjct: 290 GLEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDL-----GRWYFKTMVSQYKIKPR 344
Query: 159 LMNLYLMSGGECGVGC---ARLLFDDMPARSVVS-WNSLLKGYVKRGDID 204
+ + M GC AR L DMP ++ + W +LL GD +
Sbjct: 345 VEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTE 394
>gi|125525262|gb|EAY73376.1| hypothetical protein OsI_01257 [Oryza sativa Indica Group]
Length = 499
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 154/416 (37%), Positives = 235/416 (56%), Gaps = 25/416 (6%)
Query: 139 QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARS-VVSWNSLLKGY 197
Q+H ++ +G+ ++ +L+ Y G V AR +FD+ A + VVSWN ++ GY
Sbjct: 92 QLHSLLVRAGHAADPHASASLVQAYCSCGS---VASARRVFDETAAYADVVSWNVMIDGY 148
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
VK GD+ A ++FD MP RNVVSWT +I AQ + +A+ +F M+ + D VAL+
Sbjct: 149 VKSGDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALL 208
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
+ LSAC ++G + LG+W+H +V P++ NA+I MY CG +++A VF
Sbjct: 209 SVLSACGDLGVVDLGEWVHRFVLRRGLCQEIPLM----NAIIDMYVKCGSVKKALEVFEG 264
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEG 362
M++++ V+WT+MI GFA G EA+ +TFL VLS CSH G D G
Sbjct: 265 MEQKSIVTWTTMIAGFALHGLGSEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLG 324
Query: 363 RQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCR 422
R +F+ M + IKPR+EHYGCM+DL RAG + EA L+Q+MP K N A+ G+LL R
Sbjct: 325 RWYFKTMVSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAAR 384
Query: 423 IHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPP 482
H + EL Q L+ E++P + Y+ L++N+YA +RW V +R M G+R P
Sbjct: 385 THGDTELGEQALLHLI-ELEPHNSGNYI-LLSNIYAEQERWDAVRELRISMRDRGLRNVP 442
Query: 483 GQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
G S + ++G++H+F + D ++ I + L I G+ + E +EE
Sbjct: 443 GASSIDVDGMVHEFTSRDGSHPSLHKIREVLCAINSNIKSVGHIALLPESLHDVEE 498
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 127/291 (43%), Gaps = 43/291 (14%)
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
YV SG L A ++F+ + W +I +A+ + PE+++ ++++M + EPD
Sbjct: 148 YVKSGDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVAL 207
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFD 180
+LS C G+ GE VH VL G C + + ++++Y+ +CG V A +F+
Sbjct: 208 LSVLSACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYV----KCGSVKKALEVFE 263
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSL 240
M +S+V+W +++ G+ A +G +A+ L
Sbjct: 264 GMEQKSIVTWTTMIAGF-------------------------------ALHGLGSEAVEL 292
Query: 241 FNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIH 300
F M + V + + +A LS C+ +G LG+W + + + V +I
Sbjct: 293 FRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPR---VEHYGCMID 349
Query: 301 MYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQG---YAQEALLTFL 347
+ G + EA G+ + M + N W +++ G ++ALL +
Sbjct: 350 LLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTELGEQALLHLI 400
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 9/170 (5%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H ++ G Q+ ++ ++ YV G + A +VFE E S W MI G A
Sbjct: 226 VHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIVTWTTMIAGFALHGL 285
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
++V L+++M + P++ T+ +LSVC+ GL GR S I+
Sbjct: 286 GSEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDL-----GRWYFKTMVSQYKIKPR 340
Query: 159 LMNLYLMSGGECGVGC---ARLLFDDMPARSVVS-WNSLLKGYVKRGDID 204
+ + M GC AR L DMP ++ + W +LL GD +
Sbjct: 341 VEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTE 390
>gi|51535410|dbj|BAD37280.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125596587|gb|EAZ36367.1| hypothetical protein OsJ_20695 [Oryza sativa Japonica Group]
gi|218197849|gb|EEC80276.1| hypothetical protein OsI_22264 [Oryza sativa Indica Group]
Length = 517
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 165/512 (32%), Positives = 267/512 (52%), Gaps = 62/512 (12%)
Query: 30 RNTTKTLFQIHSQIIINGFSQ------KNYILAKLLAFYVTSGYLINAHKVFEKTENPST 83
R + + + QIH +++ G + + +L+ + F GY A KVF+ P
Sbjct: 8 RLSPRAVRQIHGHLVVGGIAAARLQHLRELLLSCVATFRGRMGY---ARKVFDGIPRPDL 64
Query: 84 AIWNQMIRGHARSETPEKSVYLYKQMID-KETEPDEYTYSFLLSVCARCGLFREGEQVHG 142
+ N M+RG+A + P + +Y++M + PD +T+ +LL CA R G QVHG
Sbjct: 65 FMHNAMVRGYAHAGAPGDAFAVYRRMTEASRLRPDAFTFCYLLRACAGLPGSRAGRQVHG 124
Query: 143 RVLASGYCSNVFIRTNLMNLYLMSGG---------ECGVG-------------------C 174
V+ G+ + ++R L+N++ G E G G
Sbjct: 125 AVVKLGFLKDAYVRNALINMFAKCGDLRVASVLLDEAGEGDVVAWSAVIAGHAARGDMAA 184
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
AR +FD+ + +V WN +L Y K G+++ A ++FD P ++VVSW T+I+G A G
Sbjct: 185 ARKMFDECTHKDIVCWNVMLGAYAKHGEMENARELFDRAPEKDVVSWNTIITGYAAQGML 244
Query: 235 RQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREP-VLVS 293
+ AL +F+EMR A D+ +V+ LS CA G L G+ IH + R P + +
Sbjct: 245 KHALEVFDEMRAAGWTPDEATIVSLLSCCANTGLLDAGRMIH----HQLHLERRPWISIV 300
Query: 294 LNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------- 343
+ NAL+ MYA CG++ A F M+ + +W S+I G A G A++++
Sbjct: 301 VGNALVSMYAKCGDLHTAVEGFNTMKDTDVWTWNSVIGGLAFHGQAEQSVRFFKKMLEKR 360
Query: 344 -----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEA 398
++FL VL ACSH G V++G++FF M +GI+P HY C+VD+ RAGL+DEA
Sbjct: 361 IHPNEISFLCVLGACSHAGLVEDGQKFFYLMKDRYGIEPNARHYSCIVDMLGRAGLLDEA 420
Query: 399 FSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYA 458
+++V NM +P+ V +LL CR H N L V +KL+ ++ + +A Y+ L++ +YA
Sbjct: 421 YAIVSNMRCEPSAVVWRTLLGACRTHGNMTLGKLVREKLL-NMNEDASADYV-LLSGIYA 478
Query: 459 AAKRWQDVAAVRQKMIKMGVRKPPGQSWVQIN 490
++ W V R+ M + G+RK G + QI+
Sbjct: 479 SSGEWLGVETERRSMDRRGIRKAAG--YAQID 508
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 168/515 (32%), Positives = 266/515 (51%), Gaps = 56/515 (10%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
IH I GF++ I L Y G + A +F+ + + WN M+ G+ ++
Sbjct: 270 IHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGE 329
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
PEK++ ++++M+++ +P T L CA G G+ VH V +
Sbjct: 330 PEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFV-------------D 376
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
+NL G + V NSL+ Y K +D A IF+ + R
Sbjct: 377 QLNL----GSDISV-----------------MNSLISMYSKCKRVDIASDIFNNLNGRTH 415
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
VSW MI G AQNG+ +AL+ F+EM+ + D +V+ + A AE+ + KWIH
Sbjct: 416 VSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGL 475
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ S + + V+ AL+ MY+ CG I A +F + R+ ++W +MI G+ G
Sbjct: 476 IIR--SCLDKNIFVT--TALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGL 531
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
+ AL +T+L V+SACSH G VDEG + F+ M Q++G++P ++HYG
Sbjct: 532 GRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYG 591
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
MVDL RAG + EA+ ++NMP+ P V G+ C+IH N E+ + A+KL E++P
Sbjct: 592 AMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLF-ELNP 650
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
++ GY L+AN+YA+ +W VA VR+ M K G++K PG S V++ +H F +G +T+
Sbjct: 651 DE-GGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTH 709
Query: 504 KQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
Q+ IY L E+ + GY PD + L L +E+
Sbjct: 710 PQSKRIYAFLEELVYEIKAAGYVPD-TNLILDVED 743
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 196/397 (49%), Gaps = 58/397 (14%)
Query: 26 LLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAI 85
LL++ + K L QI +I NG ++ KL++ + G + A +VFE ++ A+
Sbjct: 55 LLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDAL 114
Query: 86 WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVL 145
++ M++G+A++ + E ++ +M + +P Y +++LL VC + G+++HG+++
Sbjct: 115 YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLI 174
Query: 146 ASGYCSNVFIRTNLMNLYLMSGGEC-GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDID 204
+ + +NVF T ++N+Y +C + A +FD MP R +VSWN
Sbjct: 175 TNSFAANVFAMTGVVNMY----AKCRQIDDAYKMFDRMPERDLVSWN------------- 217
Query: 205 GAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACA 264
T+I+G +QNG +++AL L M+ D + LV L A A
Sbjct: 218 ------------------TIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAA 259
Query: 265 EIGDLKLGKWIHSY-VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNT 323
++G L +GK IH Y + F+ LV+++ AL MY+ CG +E A +F M ++
Sbjct: 260 DVGLLMVGKSIHGYAIRAGFA-----KLVNISTALADMYSKCGSVETARLIFDGMDQKTV 314
Query: 324 VSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFEC 368
VSW SM+ G+ + G ++A+ +T + L AC+ G ++ G+ +
Sbjct: 315 VSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKF 374
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
++Q + I ++ ++S+ +D A + N+
Sbjct: 375 VDQ-LNLGSDISVMNSLISMYSKCKRVDIASDIFNNL 410
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 53/121 (43%)
Query: 17 ALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFE 76
+ T + L + T+ IH II + + ++ L+ Y G + A K+F+
Sbjct: 450 SFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFD 509
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
+ WN MI G+ ++ L+ +M EP++ TY ++S C+ GL E
Sbjct: 510 MISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDE 569
Query: 137 G 137
G
Sbjct: 570 G 570
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 160/518 (30%), Positives = 277/518 (53%), Gaps = 57/518 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H+ +I + Y+ +L+ Y L +A ++F++ + W MI +++
Sbjct: 111 RVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRG 170
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ L+ +M+ +TEP+ +T++ +L+ C F G Q+H + Y S++F+ +
Sbjct: 171 FAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGS 230
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
+L+++Y K G I A +F +P R+
Sbjct: 231 SLLDMY----------------------------------AKSGRICDAHGVFHCLPERD 256
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VV+ T +ISG AQ G +AL LF +++ + + V + L+A + + L GK +HS
Sbjct: 257 VVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHS 316
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
+V G+ +V LN +LI MY+ CG + A +F M R +SW +M+ G++K G
Sbjct: 317 HV---LRSGQYSYVVLLN-SLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHG 372
Query: 338 YAQEAL----------------LTFLGVLSACSHGGFVDEGRQ-FFECMNQNWGIKPRIE 380
A+E L +T+L VLS CSHG D G + F+ +N GI+P I
Sbjct: 373 MAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIG 432
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HYGC+VDL RAG ++EAF ++ MP P A+ GSLL CR+H++ E+ V QKL+ E
Sbjct: 433 HYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLL-E 491
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
++PE A Y+ L +N+YA+A +W+D+ +R M + V K PG+SWV+++ ++H F A D
Sbjct: 492 LEPENAGNYVIL-SNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASD 550
Query: 501 STYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
T+ + + K + E++++ ++GY PD+S + ++E
Sbjct: 551 HTHPRREEVAKKVKELSIKFKEDGYVPDLSCVLYDVDE 588
>gi|224116552|ref|XP_002331925.1| predicted protein [Populus trichocarpa]
gi|222874597|gb|EEF11728.1| predicted protein [Populus trichocarpa]
Length = 530
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 170/508 (33%), Positives = 272/508 (53%), Gaps = 32/508 (6%)
Query: 26 LLQIRNTTKTLFQIHSQIIINGFSQKNYILA-KLLAFYVTSGYLINAHKVFEKTENPSTA 84
LLQ TL QIH+Q + G LA KL+ Y G +A KVF ++P
Sbjct: 9 LLQSCADLVTLKQIHAQALTQGLLFIEQPLACKLVNRYAKLGNPRDAQKVFGYIQDPDRV 68
Query: 85 IWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRV 144
+ +I + ++ P K+ ++ +++++ PD ++ LS C + G+ VHG +
Sbjct: 69 TYTSLINLYLSTQLPIKAFSVFSKLVNEGLRPDSHSVVGALSACGKKQDLLNGKLVHGMI 128
Query: 145 LASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDID 204
+N + L+++Y +G + A+L+F M + V SW SLL G+V ++
Sbjct: 129 FRFQLGANSIVGNALIDMYCRNGE---IKIAQLVFKQMGIKDVSSWTSLLNGFVMCNGLE 185
Query: 205 GAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQ---VALVAALS 261
A ++FDEMP RN V+WT MI+G + G + L +F +M+ G +Q + VA LS
Sbjct: 186 SARRVFDEMPWRNDVAWTAMITGYVRGGMPIRGLEMFRQMKAE--GENQPTVITAVAVLS 243
Query: 262 ACAEIGDLKLGKWIHSYVEE-NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
CA++G G+ +H Y+ + N G V+++NAL+ MY+ G +E A +F ++ +
Sbjct: 244 GCADLGAHDHGQAVHGYISKVNLDKG-----VTVSNALMDMYSKGGCVESAMKIFDRLVK 298
Query: 321 RNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQF 365
++ SWT+MI+ + G AL +TFL VLS CSH G + E +
Sbjct: 299 KDVFSWTTMISAHSSHGKGNHALEVFYDMLESGVIPNDVTFLLVLSGCSHSGLLVEANKL 358
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHN 425
F M Q +G +P+IEHYGCMVDL RAGL++EA L+ NMPM P+ + SLL C
Sbjct: 359 FNGMIQCYGFEPKIEHYGCMVDLLCRAGLLEEAKELIDNMPMDPDAVIWRSLLSACMNQR 418
Query: 426 NAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQS 485
N LA ++A K + E++P Y+ L++N+Y A R +D +R+ M V K P S
Sbjct: 419 NLGLA-EIAGKKIIELEPHDDGVYV-LLSNIYHVANRMKDARKMRKMMGDQKVMKKPACS 476
Query: 486 WVQINGVLHDFVAGDSTYKQASLIYKTL 513
++++NGV+H F ++T+ ++ IY L
Sbjct: 477 YIELNGVVHQFHTENATHHASTKIYMLL 504
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 163/490 (33%), Positives = 260/490 (53%), Gaps = 55/490 (11%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
IH+Q I GF + ++++ L Y G ++FEK + P W +I + +
Sbjct: 280 IHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGE 339
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
E +V +K+M P++YT++ ++S CA + + GEQ+HG VL G
Sbjct: 340 EEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLG---------- 389
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
L D A SV NS++ Y K G + A +F + +++
Sbjct: 390 -------------------LVD---ALSVA--NSIVTLYSKSGLLKSASLVFHGITRKDI 425
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
+SW+T+I+ +Q G +++A + MRR ++ AL + LS C + L+ GK +H++
Sbjct: 426 ISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAH 485
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
V +G + + +++ALI MY+ CG +EEA +F M+ N +SWT+MI G+A+ GY
Sbjct: 486 V---LCIGIDHEAM-VHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGY 541
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
+QEA+ +TF+GVL+ACSH G VD G +F M + I P EHYG
Sbjct: 542 SQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKEHYG 601
Query: 384 CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDP 443
C++DL RAG + EA ++++MP +D V +LL CR+H + + A++L+ +DP
Sbjct: 602 CIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLL-RLDP 660
Query: 444 EQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
A ++AL AN+YAA RW++ A +R+ M GV K G SWV +N L+ FVAGD +
Sbjct: 661 NSAGTHIAL-ANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDKLNAFVAGDQAH 719
Query: 504 KQASLIYKTL 513
Q+ I L
Sbjct: 720 PQSEHITTVL 729
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 167/379 (44%), Gaps = 59/379 (15%)
Query: 42 QIIINGFSQKNYI-LAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPE 100
Q+ N +S N + L L V G L + +F+K + W +I G+ +
Sbjct: 79 QLAQNAYSVHNMLELNSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSY 138
Query: 101 KSVYLYKQM-IDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
+++ L+ M + + D++ S L C GE +HG + SG ++VF+ + L
Sbjct: 139 EALILFSNMWVQPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSAL 198
Query: 160 MNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVV 219
+++Y+ K G I+ ++F +M RNVV
Sbjct: 199 IDMYM----------------------------------KVGKIEQGCRVFKKMTKRNVV 224
Query: 220 SWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS-Y 278
SWT +I+G G + +AL F+EM ++VG D AL A A+ L GK IH+
Sbjct: 225 SWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQT 284
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+++ F + N L MY CG+ + +F KM+ + VSWT++IT + ++G
Sbjct: 285 IKQGFDESSFVI-----NTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGE 339
Query: 339 AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
+ A+ TF V+SAC++ G Q + + G+ +
Sbjct: 340 EEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLR-LGLVDALSVAN 398
Query: 384 CMVDLFSRAGLMDEAFSLV 402
+V L+S++GL+ A SLV
Sbjct: 399 SIVTLYSKSGLLKSA-SLV 416
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 124/295 (42%), Gaps = 40/295 (13%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIH ++ G + ++ Y SG L +A VF W+ +I +++
Sbjct: 380 QIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGG 439
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ M + +P+E+ S +LSVC L +G+QVH VL G + +
Sbjct: 440 YAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHS 499
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L+++Y +CG V A +F+ M +++SW +++ GY
Sbjct: 500 ALISMY----SKCGSVEEASKIFNGMKINNIISWTAMINGY------------------- 536
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
A++G S++A++LF ++ + D V + L+AC+ G + LG +
Sbjct: 537 ------------AEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFYYF 584
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMI 330
+ + + +I + G + EA + R M + V W++++
Sbjct: 585 MLMTNEYQISPSK---EHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLL 636
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 78/186 (41%), Gaps = 32/186 (17%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H+ ++ G + + + L++ Y G + A K+F + + W MI G+A
Sbjct: 481 QVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHG 540
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++++ L++++ +PD T+ +L+ C+ G+ G F
Sbjct: 541 YSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLG----------------FYYF 584
Query: 158 NLM-NLYLMSGGECGVGC-------------ARLLFDDMPARS-VVSWNSLLKGYVKRGD 202
LM N Y +S + GC A + MP + V W++LL+ GD
Sbjct: 585 MLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGD 644
Query: 203 ID-GAW 207
+D G W
Sbjct: 645 VDRGRW 650
>gi|242096286|ref|XP_002438633.1| hypothetical protein SORBIDRAFT_10g023240 [Sorghum bicolor]
gi|241916856|gb|EER90000.1| hypothetical protein SORBIDRAFT_10g023240 [Sorghum bicolor]
Length = 529
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/476 (33%), Positives = 254/476 (53%), Gaps = 39/476 (8%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H+ + GF Y + LL Y G + A KVF++ +WN M+R + R
Sbjct: 67 KVHAAAVKTGFRWDAYTASSLLEMYTMLGRVDFARKVFDEMPQRFLVLWNMMMRCYIRCG 126
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVF--- 154
+V L ++M PD T ++ C+R G G ++ Y VF
Sbjct: 127 RFTAAVALAEEMERSGATPDRVTLVTAVTACSRAGDLSLGRRIRA------YMDGVFGFS 180
Query: 155 --IRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDE 212
+ L+++Y +G + A +F MP R+++SW L+ GY G +D A +F +
Sbjct: 181 LPVANALLDMYTKNGY---LEEAVKMFQQMPERNIISWTILVSGYAVAGQLDKARMLFYQ 237
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
++++ WT MI+ C Q+G +AL+LF +M+ RV D+ +V L+ CA IG L G
Sbjct: 238 CTQKDLILWTAMINACVQHGSFEEALTLFRDMQLQRVEPDKFTVVTLLTCCANIGALDQG 297
Query: 273 KWIHSYVEENFSVGRE-PVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMIT 331
+WIH Y E GR + L ALI MY+ CG ++++ +F +MQ R+ +WT++I
Sbjct: 298 EWIHQYAE-----GRNMKIDAVLGTALIEMYSKCGHVDKSLQIFGRMQGRDAAAWTAIIC 352
Query: 332 GFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIK 376
G A G A +AL +TF+GVL+AC HGG VDEGR+ F+ M + + I+
Sbjct: 353 GLATNGQASKALELFEEMQRSKTKPDGITFIGVLNACCHGGLVDEGRRHFQAMKEIYQIE 412
Query: 377 PRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDA--VLGSLLLGCRIHNNAELASQVA 434
PRIEHY C+V+L AGL+ EA L+++MP+ ND + G+LL C+ + N E++ ++
Sbjct: 413 PRIEHYSCLVNLLGHAGLLYEAEKLIRDMPVN-NDTMPLFGALLTACKAYGNVEMSERLT 471
Query: 435 QKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQIN 490
+++ E D Q L++NVYA A RW++ VR KM V+K G S +++
Sbjct: 472 KRIAKE-DCSQNPDVNVLMSNVYATASRWEESIRVRSKMTHPAVKKTAGCSMIEVK 526
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 165/349 (47%), Gaps = 59/349 (16%)
Query: 87 NQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLA 146
N +IR AR + + + +Y + + D YTY F+L L EG +VH +
Sbjct: 15 NVLIRTLARRGSFARVMAVYYDLRARGLVADSYTYPFVLRAIGVMKLSVEGRKVHAAAVK 74
Query: 147 SGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGA 206
+G+ + + ++L+ +Y M G V AR +FD+MP R +V WN +++ Y++
Sbjct: 75 TGFRWDAYTASSLLEMYTMLG---RVDFARKVFDEMPQRFLVLWNMMMRCYIR------- 124
Query: 207 WKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEI 266
C G+ A++L EM R+ D+V LV A++AC+
Sbjct: 125 ---------------------C---GRFTAAVALAEEMERSGATPDRVTLVTAVTACSRA 160
Query: 267 GDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSW 326
GDL LG+ I +Y++ F + + NAL+ MY G +EEA +F++M RN +SW
Sbjct: 161 GDLSLGRRIRAYMDGVFGFS-----LPVANALLDMYTKNGYLEEAVKMFQQMPERNIISW 215
Query: 327 TSMITGFAKQGY-----------AQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGI 375
T +++G+A G Q+ L+ + +++AC G +E F M Q +
Sbjct: 216 TILVSGYAVAGQLDKARMLFYQCTQKDLILWTAMINACVQHGSFEEALTLFRDM-QLQRV 274
Query: 376 KPRIEHYGCMVDLFSRAGLMDEA-----FSLVQNMPMKPNDAVLGSLLL 419
+P ++ + G +D+ ++ +NM + DAVLG+ L+
Sbjct: 275 EPDKFTVVTLLTCCANIGALDQGEWIHQYAEGRNMKI---DAVLGTALI 320
>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 852
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/493 (32%), Positives = 264/493 (53%), Gaps = 62/493 (12%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H I+ NGF Y+ + L+ Y G L +A +V E E+ WN MI G R
Sbjct: 336 QVHGCIVRNGFGCNAYVQSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHG 395
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E+++ L+K+M + + D YT+ +L+ C + +G+ VH V I+T
Sbjct: 396 FEEEAILLFKKMHARNMKIDHYTFPSVLNCCIVGRI--DGKSVHCLV----------IKT 443
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
N L+S N+L+ Y K D++ A+ +F++M ++
Sbjct: 444 GFENYKLVS------------------------NALVDMYAKTEDLNCAYAVFEKMFEKD 479
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
V+SWT++++G QNG ++L F +MR + V DQ + + LSACAE+ L+ GK +HS
Sbjct: 480 VISWTSLVTGYTQNGSHEESLKTFCDMRISGVSPDQFIVASILSACAELTLLEFGKQVHS 539
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
+ +G L S+NN+L+ MYA CG +++A +F M R+ ++WT++I G+A+ G
Sbjct: 540 ---DFIKLGLRSSL-SVNNSLVTMYAKCGCLDDADAIFVSMHVRDVITWTALIVGYARNG 595
Query: 338 YAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDE 397
+++L ++F+ M + +GI+P EHY CM+DLF R G +DE
Sbjct: 596 KGRDSL--------------------KYFQQMKKIYGIEPGPEHYACMIDLFGRLGKLDE 635
Query: 398 AFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVY 457
A ++ M +KP+ V +LL CR+H N EL + A L E++P A Y+ L +N+Y
Sbjct: 636 AKEILNQMDVKPDATVWKALLAACRVHGNLELGERAATNLF-ELEPMNAMPYVML-SNMY 693
Query: 458 AAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEIT 517
AA++W D A +R+ M G+ K PG SW+++N LH F++ D + + + IY + EI
Sbjct: 694 LAARKWDDAAKIRRLMKSKGITKEPGCSWIEMNSRLHTFISEDRGHPREAEIYSKIDEII 753
Query: 518 MQAMQEGYKPDIS 530
+ + GY PD++
Sbjct: 754 RRIKEVGYVPDMN 766
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 135/565 (23%), Positives = 244/565 (43%), Gaps = 102/565 (18%)
Query: 6 IIPANPATSSKALTTR-QIFSLLQIRNTTKTLFQIHSQIIINGFSQ-------------- 50
++ A+P+ + + T Q + I ++ +++F HS ++NG S+
Sbjct: 84 LLSASPSLNEDSDDTGVQQVVMHNIADSYQSIF--HSNQLLNGLSKSGQIDDARELFDKM 141
Query: 51 ---KNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYK 107
Y +++ Y G L+ A ++F + S+ W+ +I G+ R ++ L+K
Sbjct: 142 LQRDEYTWNTMVSGYANVGRLVEARELFNGFSSRSSITWSSLISGYCRFGRQAEAFDLFK 201
Query: 108 QMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSG 167
+M + +P +YT +L C+ GL ++GE +HG V+ +G+ SNV++ L+++Y
Sbjct: 202 RMRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESNVYVVAGLVDMY---- 257
Query: 168 GECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISG 227
+C R + L KG F++ H V WT M++G
Sbjct: 258 AKC--------------RHISEAEILFKGLA-----------FNKGNH---VLWTAMVTG 289
Query: 228 CAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGR 287
AQNG +A+ F M V +Q + L+AC+ + G+ +H + N G
Sbjct: 290 YAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRN-GFGC 348
Query: 288 EPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALL--- 344
+ S AL+ MYA CG++ A V M+ + VSW SMI G + G+ +EA+L
Sbjct: 349 NAYVQS---ALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFK 405
Query: 345 ------------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY----GCMVDL 388
TF VL+ C G +G+ C+ IK E+Y +VD+
Sbjct: 406 KMHARNMKIDHYTFPSVLNCCIVGRI--DGKS-VHCLV----IKTGFENYKLVSNALVDM 458
Query: 389 FSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNA--ELASQVAQKLVAEIDPEQA 446
+++ ++ A+++ + M K D + + L+ N + E ++ + P+Q
Sbjct: 459 YAKTEDLNCAYAVFEKMFEK--DVISWTSLVTGYTQNGSHEESLKTFCDMRISGVSPDQ- 515
Query: 447 AGYLALVANVYAAAKRWQDV---AAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTY 503
+VA++ +A + V IK+G+R S + +N L A
Sbjct: 516 ----FIVASILSACAELTLLEFGKQVHSDFIKLGLR-----SSLSVNNSLVTMYAKCGCL 566
Query: 504 KQASLIYKTL---GEITMQAMQEGY 525
A I+ ++ IT A+ GY
Sbjct: 567 DDADAIFVSMHVRDVITWTALIVGY 591
>gi|357151860|ref|XP_003575929.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14820-like, partial [Brachypodium
distachyon]
Length = 498
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/480 (33%), Positives = 253/480 (52%), Gaps = 26/480 (5%)
Query: 33 TKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRG 92
T T+ H + G + ++ L+ Y + A +VF+ W M+
Sbjct: 9 TDTVRGTHGIAVRVGADEDGFVGTALVGAYAACQRVAEARRVFDGMPERDLVAWGVMLDS 68
Query: 93 HARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSN 152
+ ++ +++ L +M PD+ + +LS C R G+ +H + S +
Sbjct: 69 YFNTQNYRETLLLLNKMKRSRVVPDQVILATVLSTCGHTRHLRSGKTIHSYIQVSDIFVD 128
Query: 153 VFIRTNLMNLYLMSGGEC-GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFD 211
+ + L+N+Y C + A ++ M + +VS +++ GY K G I+ A IF+
Sbjct: 129 ARLSSALINMY----ASCMDMEMADKIYSGMQRKDLVSSTAMVCGYAKNGKIEIARSIFN 184
Query: 212 EMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKL 271
M ++VVSW+ MIS A+N + + L+LFN+M+ V D++ +++ +SACA IG L
Sbjct: 185 HMAEKDVVSWSAMISAYAENNQPSEVLNLFNKMQGCGVSPDEITMLSVISACANIGSLDK 244
Query: 272 GKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMIT 331
+WIHS V + G +L S+ NALI M++ CG + A +F M R+N ++WTSMI
Sbjct: 245 ARWIHSIVGNH---GFYKIL-SICNALIDMFSKCGSLTLALNMFNAMPRKNVITWTSMIA 300
Query: 332 GFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIK 376
FA G AL +TFL +L AC H G V EGR FECM Q + I+
Sbjct: 301 AFAMHGDGPSALTLFGQMKGEGVEPNGVTFLVLLYACCHAGLVYEGRSLFECMLQEYRIE 360
Query: 377 PRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQK 436
P+ EHYGCMVDL RA LM EA L+++M ++PN A+ GSLL C +H + EL A+K
Sbjct: 361 PKHEHYGCMVDLMGRAKLMQEAVDLIESMHIRPNVAIWGSLLAACWMHGDIELGEFAAKK 420
Query: 437 LVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDF 496
++ E+DP Y+ L++N++A + W + +R M GV K G SW+++N +H F
Sbjct: 421 IL-ELDPNHDGAYV-LLSNIHAKSGNWNNAQKLRVMMKVHGVSKETGYSWLELNCTVHGF 478
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 165/516 (31%), Positives = 267/516 (51%), Gaps = 57/516 (11%)
Query: 39 IHSQIIINGFSQKNYILAKLLA-FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+H+ ++ + F + +L ++ Y G L +A ++F++ W +I G +++
Sbjct: 109 VHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNN 168
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
P ++ L+ QM+ +P+ +T S LL G Q+H L GY S+V++ +
Sbjct: 169 RPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGS 228
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y CG +D A FD MP ++
Sbjct: 229 ALVDMY----ARCG------------------------------HMDAAQLAFDGMPTKS 254
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VSW +ISG A+ G+ AL L +M+R + LSACA IG L+ GKW+H+
Sbjct: 255 EVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHA 314
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
++ G + ++ + N L+ MYA G I++A VF ++ + + VSW +M+TG A+ G
Sbjct: 315 HM---IKSGLK-LIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHG 370
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+E L ++FL VL+ACSH G +DEG +FE M + + ++P + HY
Sbjct: 371 LGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHY 429
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
VDL R GL+D A ++ MP++P AV G+LL CR+H N EL A++ E+D
Sbjct: 430 VTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAF-ELD 488
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P + G L++N+YA+A RW+DVA VR+ M + GV+K P SWV+I +H FVA D T
Sbjct: 489 PHDS-GPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDET 547
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ + I EI+ + + GY PD S + L +++
Sbjct: 548 HPRIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQ 583
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 161/357 (45%), Gaps = 59/357 (16%)
Query: 116 PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLM-NLYLMSGGECG-VG 173
PD YS LL C R G +G VH ++ S + N + N++ N+Y +CG +
Sbjct: 85 PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMY----AKCGCLD 140
Query: 174 CARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGK 233
AR +FD+MP + +V+W T +I+G +QN +
Sbjct: 141 DARRMFDEMPTKDMVTW-------------------------------TALIAGFSQNNR 169
Query: 234 SRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVS 293
R AL LF +M R + L + L A L G +H++ G + V
Sbjct: 170 PRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFC---LKYGYQSS-VY 225
Query: 294 LNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------- 343
+ +AL+ MYA CG ++ A F M ++ VSW ++I+G A++G + AL
Sbjct: 226 VGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKN 285
Query: 344 -----LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEA 398
T+ VLSAC+ G +++G+ M ++ G+K ++D++++AG +D+A
Sbjct: 286 FQPTHFTYSSVLSACASIGALEQGKWVHAHMIKS-GLKLIAFIGNTLLDMYAKAGSIDDA 344
Query: 399 FSLVQNMPMKPNDAVLGSLLLGCRIHN-NAELASQVAQKLVAEIDPEQAAGYLALVA 454
+ + +KP+ ++L GC H E + Q L I+P + + L A
Sbjct: 345 KRVFDRL-VKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTA 400
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 109/235 (46%), Gaps = 34/235 (14%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H+ + G+ Y+ + L+ Y G++ A F+ S WN +I GHAR
Sbjct: 210 QLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKG 269
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E +++L +M K +P +TYS +LS CA G +G+ VH ++ SG FI
Sbjct: 270 EGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGN 329
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y +G + A+ +FD + VVSWN
Sbjct: 330 TLLDMYAKAG---SIDDAKRVFDRLVKPDVVSWN-------------------------- 360
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
TM++GCAQ+G ++ L F +M R + ++++ + L+AC+ G L G
Sbjct: 361 -----TMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEG 410
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 166/524 (31%), Positives = 283/524 (54%), Gaps = 39/524 (7%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H I ++GF +IL +LL Y L+++ K+F++ WN +I G+A+
Sbjct: 91 KVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMG 150
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ K + DK E D ++++ ++S R E ++ R++ S ++
Sbjct: 151 LLQEA----KSLFDKMPERDNFSWTAMISGYVRHDRPNEALELF-RMMKRSDNS----KS 201
Query: 158 NLMNLYLMSGGECGVGCARL--------LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKI 209
N + V C R+ + + + VV W++L Y K G I+ A I
Sbjct: 202 NKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVV-WSALSDMYGKCGSIEEARHI 260
Query: 210 FDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDL 269
FD+M R++V+WT MI Q+G+ ++ LF ++ R+ + ++ L+ACA
Sbjct: 261 FDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSE 320
Query: 270 KLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSM 329
+LGK +H Y+ VG +P + + AL+HMY+ CG + A VF++ + + SWTS+
Sbjct: 321 ELGKKVHGYMTR---VGFDPFSFAAS-ALVHMYSKCGNMVSAERVFKETPQPDLFSWTSL 376
Query: 330 ITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWG 374
I G+A+ G EA+ +TF+GVLSAC+H G VD+G +F + + +G
Sbjct: 377 IAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYG 436
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVA 434
+ +HY C++DL +R+G DEA +++ M MKP+ + SLL GCRIH N +LA + A
Sbjct: 437 LTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAA 496
Query: 435 QKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLH 494
+ L EI+PE A Y+ L AN+YA A W +VA +R+ M GV K PG SW+ I +H
Sbjct: 497 EALF-EIEPENPATYVTL-ANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVH 554
Query: 495 DFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
F+ GD ++ ++ I + LG+++ + +EG+ PD + + +E+
Sbjct: 555 VFLVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDTNFVLHDVED 598
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 170/330 (51%), Gaps = 27/330 (8%)
Query: 108 QMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSG 167
Q++ + +P YS L+ C + L ++G++VH + SG+ +FI L+ +Y
Sbjct: 60 QILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMY---- 115
Query: 168 GEC-GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMIS 226
+C + ++ LFD+MP R + SWN L+ GY K G + A +FD+MP R+ SWT MIS
Sbjct: 116 AKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMIS 175
Query: 227 GCAQNGKSRQALSLFNEMRRA-RVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSV 285
G ++ + +AL LF M+R+ ++ + +AL+A A + L++GK IH Y+
Sbjct: 176 GYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLD 235
Query: 286 GREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-- 343
E V +L++ MY CG IEEA +F KM R+ V+WT+MI + + G +E
Sbjct: 236 SDEVVWSALSD----MYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDL 291
Query: 344 -------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFS 390
TF GVL+AC++ + G++ M + G P +V ++S
Sbjct: 292 FADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTR-VGFDPFSFAASALVHMYS 350
Query: 391 RAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
+ G M A + + P +P+ SL+ G
Sbjct: 351 KCGNMVSAERVFKETP-QPDLFSWTSLIAG 379
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 168/508 (33%), Positives = 252/508 (49%), Gaps = 56/508 (11%)
Query: 47 GFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLY 106
G +Q +++ L++ Y G + A +F++ E P +N +I G++ + SV L+
Sbjct: 251 GLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELF 310
Query: 107 KQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMS 166
K+++ P T L+ V + G +H V+ +G +N + T L LY
Sbjct: 311 KELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCR- 369
Query: 167 GGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMIS 226
F+DM D A + FD MP + + SW MIS
Sbjct: 370 ------------FNDM---------------------DSARRAFDAMPEKTMESWNAMIS 396
Query: 227 GCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVG 286
G AQNG + A++LF +M+ V + + + +ALSACA++G L LGKW+H +
Sbjct: 397 GYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANE---- 452
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALL-- 344
+ + V + ALI MY CG I EA +F M +N VSW MI+G+ G EAL
Sbjct: 453 KLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLY 512
Query: 345 -------------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSR 391
TFL VL ACSHGG V EG F M ++GI P IEH CMVDL R
Sbjct: 513 KDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGR 572
Query: 392 AGLMDEAFSLVQNMPMKP-NDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYL 450
AG + EAF L+ P + G+LL C +H + +LA +QKL E++PE GY
Sbjct: 573 AGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLASQKLF-ELEPEN-TGYY 630
Query: 451 ALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIY 510
L++N+Y + K++ + A VRQ+ + K PG + ++I H F+AGD + Q+ IY
Sbjct: 631 VLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFMAGDRAHPQSDAIY 690
Query: 511 KTLGEITMQAMQEGYKPDISELFLGIEE 538
L ++T + ++ GY+PD +EE
Sbjct: 691 LYLEKLTAKMIEAGYRPDTEAALYDVEE 718
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 9/211 (4%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H+ ++ G + L Y + +A + F+ + WN MI G+A++
Sbjct: 344 LHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGL 403
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
E +V L++QM P+ T S LS CA+ G G+ VH + NV++ T
Sbjct: 404 TEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTA 463
Query: 159 LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP--- 214
L+++Y+ +CG + AR +FD M ++VVSWN ++ GY G A K++ +M
Sbjct: 464 LIDMYV----KCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAH 519
Query: 215 -HRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
H ++ +++ C+ G ++ ++F M
Sbjct: 520 LHPTSSTFLSVLYACSHGGLVKEGTTVFRSM 550
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 148/370 (40%), Gaps = 111/370 (30%)
Query: 116 PDEYTYSF----LLSVCARCGLFREG------EQVHGRVLASGYCSNVFIRTNLMNLYLM 165
PD ++++F L S C+R G+ +H +ASG+ ++ F+ + L LY
Sbjct: 111 PDSFSFAFAATSLASSCSRGGISPPSAASAALRPLHALAVASGFAADNFVASALAKLYFT 170
Query: 166 SGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMI 225
+ RG+ A K+FD +P + V W T++
Sbjct: 171 --------------------------------LSRGN--DARKVFDAVPSPDTVLWNTLL 196
Query: 226 SGCAQNGKSRQALSLFNEMRRA-RVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFS 284
+G + + +AL F M A V D L + L A AE+ + +G+ +H++ E+
Sbjct: 197 AGLSGS----EALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGL 252
Query: 285 VGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALL 344
E V+ LI +YA CG++E A +F +M+ + V++ ++I+G++ G ++
Sbjct: 253 AQHEHVV----TGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVE 308
Query: 345 TF-----LGV---------------------LSACSHGGFV------------------- 359
F +G+ L+ C H V
Sbjct: 309 LFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYC 368
Query: 360 -----DEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP---MKPND 411
D R+ F+ M + +E + M+ +++ GL + A +L Q M ++PN
Sbjct: 369 RFNDMDSARRAFDAMPEK-----TMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNP 423
Query: 412 AVLGSLLLGC 421
+ S L C
Sbjct: 424 LTISSALSAC 433
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 157/518 (30%), Positives = 272/518 (52%), Gaps = 57/518 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H+ +I + Y+ +L+ FYV L +A VF+ + W MI +++
Sbjct: 79 RVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRG 138
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ L+ QM+ TEP+E+T++ +L+ C F G Q+H ++ Y ++V++ +
Sbjct: 139 YASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGS 198
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
+L+++Y K G I A IF +P R+
Sbjct: 199 SLLDMY----------------------------------AKDGKIHEARGIFQCLPERD 224
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VVS T +ISG AQ G +AL LF ++R + + V + L+A + + L GK +H+
Sbjct: 225 VVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHN 284
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
++ + P V L N+LI MY+ CG + A +F + R +SW +M+ G++K G
Sbjct: 285 HLLRS----EVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHG 340
Query: 338 YAQEAL----------------LTFLGVLSACSHGGFVDEGRQ-FFECMNQNWGIKPRIE 380
+E L +T L VLS CSHGG D+G F++ + ++P +
Sbjct: 341 EGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSK 400
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HYGC+VD+ RAG ++ AF V+ MP +P+ A+ G LL C +H+N ++ V +L+ +
Sbjct: 401 HYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLL-Q 459
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
I+PE A Y+ L +N+YA+A RW+DV ++R M+K V K PG+SW++++ VLH F A D
Sbjct: 460 IEPENAGNYVIL-SNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASD 518
Query: 501 STYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++ + + + E++ + + GY PD+S + ++E
Sbjct: 519 CSHPRREEVSAKVQELSARFKEAGYVPDLSCVLHDVDE 556
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/520 (30%), Positives = 266/520 (51%), Gaps = 30/520 (5%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
IH + +G + ++ L+ Y + A VF+ + + WN + +
Sbjct: 365 IHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGF 424
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
P+K + ++++M+ +PD T +L C+ + G+ +HG + G +VF+
Sbjct: 425 PQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNA 484
Query: 159 LMNLYLMSGGEC-GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L++LY +C V A+++FD +P R V SWN +L Y + + +F +M
Sbjct: 485 LLSLY----AKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDE 540
Query: 218 V----VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK 273
V ++W+ +I GC +N + +A+ +F +M+ D+ + + L AC+ L++GK
Sbjct: 541 VKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGK 600
Query: 274 WIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF 333
IH YV ++ + ++ NAL+ MYA CG + + VF M ++ SW +MI
Sbjct: 601 EIHCYVFRHW----KDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFAN 656
Query: 334 AKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
G +EAL TF VLSACSH V+EG Q F M+++ ++P
Sbjct: 657 GMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPE 716
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
EHY C+VD++SRAG ++EA+ +Q MPM+P + L GCR++ N ELA A+KL
Sbjct: 717 AEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLF 776
Query: 439 AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVA 498
EIDP +A Y+ L N+ AK W + + +R+ M + G+ K PG SW + +H FVA
Sbjct: 777 -EIDPNGSANYVTLF-NILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVA 834
Query: 499 GDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
GD + ++ IY L E+ + GYKPD + I++
Sbjct: 835 GDKSNMESDKIYNFLDELFAKIKAAGYKPDTDYVLHDIDQ 874
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 166/363 (45%), Gaps = 59/363 (16%)
Query: 7 IPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSG 66
+ ANP T S L S LQ + K +IH ++ +G + ++ + + FY
Sbjct: 137 VKANPLTVSSILPG---CSDLQDLKSGK---EIHGFVVRHGMVEDVFVSSAFVNFYAKCL 190
Query: 67 YLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLS 126
+ A VF+ + WN + + P+K + ++++M+ +PD T S +LS
Sbjct: 191 CVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILS 250
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARS 186
C+ + G+ +HG L G NVF+ L+NLY C V A+ +FD MP R+
Sbjct: 251 ACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLY--ESCLC-VREAQAVFDLMPHRN 307
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
V++WNSL YV G P ++ L++F EM
Sbjct: 308 VITWNSLASCYVNCG-----------FP--------------------QKGLNVFREMGL 336
Query: 247 ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCG 306
V D +A+ + L AC+++ DLK GK IH + ++ V E V V AL+++YA+C
Sbjct: 337 NGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMV--EDVFVC--TALVNLYANCL 392
Query: 307 EIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEA---------------LLTFLGVLS 351
+ EA VF M RN V+W S+ + + G+ Q+ L+T L +L
Sbjct: 393 CVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILH 452
Query: 352 ACS 354
ACS
Sbjct: 453 ACS 455
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 131/277 (47%), Gaps = 40/277 (14%)
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
A +VF+ WN + + P++ + ++++M + + + T S +L C+
Sbjct: 94 ARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSD 153
Query: 131 CGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGEC-GVGCARLLFDDMPARSVVS 189
+ G+++HG V+ G +VF+ + +N Y +C V A+ +FD MP R VV+
Sbjct: 154 LQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFY----AKCLCVREAQTVFDLMPHRDVVT 209
Query: 190 WNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARV 249
WNSL YV G P ++ L++F EM V
Sbjct: 210 WNSLSSCYVNCG-----------FP--------------------QKGLNVFREMVLDGV 238
Query: 250 GLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIE 309
D V + LSAC+++ DLK GK IH + ++ V E V VS NAL+++Y SC +
Sbjct: 239 KPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMV--ENVFVS--NALVNLYESCLCVR 294
Query: 310 EAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
EA VF M RN ++W S+ + + G+ Q+ L F
Sbjct: 295 EAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVF 331
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 113/249 (45%), Gaps = 40/249 (16%)
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
P +++ +Y + +PD+ + + CA + +Q H G S+V I
Sbjct: 21 PNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNA 80
Query: 159 LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
++ Y G+C V AR +FDD+ AR VV+WNSL YV G P
Sbjct: 81 FIHAY----GKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCG-----------FP--- 122
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+Q L++F +M +V + + + + L C+++ DLK GK IH
Sbjct: 123 -----------------QQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHG 165
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
+V + V E V VS +A ++ YA C + EA VF M R+ V+W S+ + + G
Sbjct: 166 FVVRHGMV--EDVFVS--SAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCG 221
Query: 338 YAQEALLTF 346
+ Q+ L F
Sbjct: 222 FPQKGLNVF 230
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 8/118 (6%)
Query: 231 NGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPV 290
+G +A+ ++ R + D+ +A ACA D K H R V
Sbjct: 18 HGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHD------DATRCGV 71
Query: 291 L--VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
+ VS+ NA IH Y C +E A VF + R+ V+W S+ + G+ Q+ L F
Sbjct: 72 MSDVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVF 129
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 176/539 (32%), Positives = 279/539 (51%), Gaps = 56/539 (10%)
Query: 23 IFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLL--AFYVTSGYLINAHKVFEKTEN 80
I LQ + TL Q+H+Q++ G S + Y L+ LL + S Y A +F N
Sbjct: 8 ILQKLQKCHNLNTLKQVHAQMLTTGLSFQTYYLSHLLNTSSKFASTY---AFTIFNHIPN 64
Query: 81 PSTAIWNQMIRGHAR-SETPEKSVYLYKQMIDKET-EPDEYTYSFLLSVCARCGLFREGE 138
P+ ++N +I S+ + LY ++ +T +P+ +T+ L CA + G
Sbjct: 65 PTLFLYNTLISSLTHHSDQIHLAFSLYNHILTHKTLQPNSFTFPSLFKACASHPWLQHGP 124
Query: 139 QVHGRVLA---SGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLK 195
+H VL Y + F++ +L+N Y G C +R LFD + + +WN++L
Sbjct: 125 PLHAHVLKFLQPPY--DPFVQNSLLNFYAKYGKLC---VSRYLFDQISEPDLATWNTMLA 179
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVA 255
Y + + VS++T S +AL LF +M+ +++ ++V
Sbjct: 180 AYAQSA---------------SHVSYSTSFEDADM---SLEALHLFCDMQLSQIKPNEVT 221
Query: 256 LVAALSACAEIGDLKLGKWIHSYV-EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGV 314
LVA +SAC+ +G L G W H YV N + R + AL+ MY+ CG + A +
Sbjct: 222 LVALISACSNLGALSQGAWAHGYVLRNNLKLNR-----FVGTALVDMYSKCGCLNLACQL 276
Query: 315 FRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFV 359
F ++ R+T + +MI GFA G+ +AL T + + ACSHGG V
Sbjct: 277 FDELSDRDTFCYNAMIGGFAVHGHGNQALELYRNMKLEDLVPDGATIVVTMFACSHGGLV 336
Query: 360 DEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLL 419
+EG + FE M G++P++EHYGC++DL RAG + EA +Q+MPMKPN + SLL
Sbjct: 337 EEGLEIFESMKGVHGMEPKLEHYGCLIDLLGRAGRLKEAEERLQDMPMKPNAILWRSLLG 396
Query: 420 GCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVR 479
++H N E+ + A K + E++PE + Y+ L++N+YA+ RW DV VR M GV
Sbjct: 397 AAKLHGNLEMG-EAALKHLIELEPETSGNYV-LLSNMYASIGRWNDVKRVRMLMKDHGVD 454
Query: 480 KPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
K PG S V+ING +H+F+ GD + + IY +GEI + ++ G+KP SE+ +EE
Sbjct: 455 KLPGFSLVEINGAMHEFLTGDKAHPFSKEIYSKIGEINRRLLEYGHKPRTSEVLFDVEE 513
>gi|297597505|ref|NP_001044065.2| Os01g0715700 [Oryza sativa Japonica Group]
gi|255673627|dbj|BAF05979.2| Os01g0715700 [Oryza sativa Japonica Group]
Length = 699
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 168/482 (34%), Positives = 259/482 (53%), Gaps = 36/482 (7%)
Query: 81 PSTAI-WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE- 138
P+T + N ++R AR P + ++ D PD Y+++FL+
Sbjct: 152 PATLLAHNSLLRALARGRRPHLAFGAFR---DLPLAPDNYSFTFLVRAATALAAAAASAL 208
Query: 139 -------QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWN 191
VH L G+ + +++ +++Y +G VG AR F ++ + VV
Sbjct: 209 DAALIAGSVHASALRHGHAGDPHVQSGAVSMYAAAGD---VGAARAAFAEIASPDVVCVT 265
Query: 192 SLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL 251
+++ G+ D A ++FD MP R+ V+W MI+G G+SR+AL LF+EMR A +
Sbjct: 266 AMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAV 325
Query: 252 DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEA 311
+V LV+AL+ACA++G L+ GKW+HS S G + V+L ALI MY+ CG + A
Sbjct: 326 GEVTLVSALTACAQLGALERGKWVHSCAH---SRGMR-LSVTLGTALIDMYSKCGAVAAA 381
Query: 312 YGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHG 356
VF M RN +WTS ++G A G ++ L +TF+ VL CS
Sbjct: 382 MEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMA 441
Query: 357 GFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGS 416
G VDEGR F+ M N GI P +EHYGCMVDL+ RAG +D+A + + MP++P++ V G+
Sbjct: 442 GLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGA 501
Query: 417 LLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKM 476
LL RIH N EL KL+A I+ + A ++ L++N+YA ++ W+ V+ VR M
Sbjct: 502 LLNASRIHKNVELGKYAMDKLMA-IESKNDAAHV-LLSNIYADSQNWKGVSNVRNMMKAK 559
Query: 477 GVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGI 536
GV+K PG S +++ G +H+F G T+ + I L E+ + +GY + E+ I
Sbjct: 560 GVKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDI 619
Query: 537 EE 538
EE
Sbjct: 620 EE 621
>gi|147767785|emb|CAN66974.1| hypothetical protein VITISV_022076 [Vitis vinifera]
Length = 967
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 155/406 (38%), Positives = 238/406 (58%), Gaps = 24/406 (5%)
Query: 120 TYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLF 179
++ L+S CA ++G +H + SG+ +VF T L+++Y G + AR F
Sbjct: 569 SWKALISACASLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGL---LSLARKQF 625
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
D+M R V +WNS++ GY + GD++GA ++F MP RNV SWT MISG AQNG+ +ALS
Sbjct: 626 DEMTVRDVPTWNSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALS 685
Query: 240 LFNEMRR-ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNAL 298
+F M + ++V L + L ACA +G L++G+ I Y N + ++NAL
Sbjct: 686 MFLMMEEETEMRPNEVTLASVLPACANLGALEVGERIEVYARGNGYFKN----LYVSNAL 741
Query: 299 IHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGF 358
+ MYA CG I++A+GVF ++ R ++G A + + TF+GVL AC+HGG
Sbjct: 742 LEMYARCGRIDKAWGVFEEIDGR-------------REGAAPDDV-TFVGVLLACTHGGM 787
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLL 418
V EG+ FFE M +++ I P++EHYGCMVDL RAG + EA L+ MPM+P+ V G+LL
Sbjct: 788 VVEGQHFFESMERDFSIAPKLEHYGCMVDLLGRAGELREAHDLILRMPMEPDSVVWGTLL 847
Query: 419 LGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
C H + ELA + A L E++P Y+ +++N+YA A RW VA +R+ M +
Sbjct: 848 GACSFHGHVELAEKAAGALF-ELEPSNPGNYV-ILSNIYATAGRWDGVARLRKLMKGGKI 905
Query: 479 RKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEG 524
K G S+++ G +H F+ D ++ ++ IY L E++M+ G
Sbjct: 906 TKAAGYSFIEEGGHIHKFIVEDRSHSRSDEIYALLDEVSMKMKLHG 951
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 123/337 (36%), Gaps = 99/337 (29%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H+ + +GF + L L+ Y G L A K F++ WN MI G+AR
Sbjct: 589 LHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNSMIAGYARCGD 648
Query: 99 PEKSVYLYKQM------------------------------IDKETE--PDEYTYSFLLS 126
E ++ L++ M +++ETE P+E T + +L
Sbjct: 649 LEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLP 708
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARS 186
CA G GE++ +GY N+++
Sbjct: 709 ACANLGALEVGERIEVYARGNGYFKNLYVS------------------------------ 738
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
N+LL+ Y + G ID AW +F+E+ + RR
Sbjct: 739 ----NALLEMYARCGRIDKAWGVFEEI-----------------------------DGRR 765
Query: 247 ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCG 306
D V V L AC G + G+ +E +FS+ + + ++ + G
Sbjct: 766 EGAAPDDVTFVGVLLACTHGGMVVEGQHFFESMERDFSIAPK---LEHYGCMVDLLGRAG 822
Query: 307 EIEEAYGVFRKM-QRRNTVSWTSMITGFAKQGYAQEA 342
E+ EA+ + +M ++V W +++ + G+ + A
Sbjct: 823 ELREAHDLILRMPMEPDSVVWGTLLGACSFHGHVELA 859
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 174/518 (33%), Positives = 282/518 (54%), Gaps = 32/518 (6%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H + +G + ++ ++ Y G + A+KVFE+ + WN M+ G+++
Sbjct: 271 QVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIG 330
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+ ++ L++++ +++ E + T+S +++ A+ GL E V ++L G NV
Sbjct: 331 RFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLV 390
Query: 158 NLMNL-----YLMSGGECGVGCARLLF---DDMPARSVVSWNSLLKGYVKRGDIDGAWKI 209
+L++ L+ G E + + ++ P ++ N+L+ Y K A +
Sbjct: 391 SLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAM 450
Query: 210 FDEMP--HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR--VGLDQVALVAALSACAE 265
FD +P R+VV+WT +I G AQ+G++ +AL LF++M + V + + AL ACA
Sbjct: 451 FDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACAR 510
Query: 266 IGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVS 325
+G L+ G+ IH+YV N E ++ + N LI MY+ G+++ A VF M +RN VS
Sbjct: 511 LGALRFGRQIHAYVLRN---RFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVS 567
Query: 326 WTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMN 370
WTS++TG+ G +EAL +TF+ VL ACSH G VD+G +F MN
Sbjct: 568 WTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMN 627
Query: 371 QNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELA 430
+++G+ P EHY CMVDL SRAG +DEA L++ MPMKP AV +LL CR++ N EL
Sbjct: 628 KDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELG 687
Query: 431 SQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQIN 490
A +L+ E++ Y L++N+YA A+ W+DVA +R M G++K PG SWVQ
Sbjct: 688 EYAANQLL-ELESGNDGSY-TLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGR 745
Query: 491 GVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
F AGD ++ + IY L ++ + GY PD
Sbjct: 746 KGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPD 783
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 208/430 (48%), Gaps = 44/430 (10%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTA---IWNQMIRGHAR 95
+H+ + +GF ++ L++ Y G NA +VF++ WN ++ + +
Sbjct: 167 VHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQ 226
Query: 96 SETPEKSVYLYKQMI-DKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVF 154
+++ ++++M D PD + +L CA G + G+QVHG L SG +VF
Sbjct: 227 GGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVF 286
Query: 155 IRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
+ ++++Y +CG + A +F+ M + VVSWN+++ GY + G D A +F+++
Sbjct: 287 VGNAVVDMY----AKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKI 342
Query: 214 PHR----NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDL 269
NVV+W+ +I+G AQ G +AL +F +M + V LV+ LS CA G L
Sbjct: 343 REEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTL 402
Query: 270 KLGKWIHSY-------VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM--QR 320
GK H + ++EN G + +++ NALI MY+ C + A +F + +
Sbjct: 403 LHGKETHCHAIKWILNLDEN-DPGDDLMVI---NALIDMYSKCKSPKAARAMFDLIPPKD 458
Query: 321 RNTVSWTSMITGFAKQGYAQEAL-----------------LTFLGVLSACSHGGFVDEGR 363
R+ V+WT +I G A+ G A EAL T L AC+ G + GR
Sbjct: 459 RSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGR 518
Query: 364 QFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRI 423
Q + +N + C++D++S++G +D A + NM + N SL+ G +
Sbjct: 519 QIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQR-NGVSWTSLMTGYGM 577
Query: 424 HNNAELASQV 433
H E A Q+
Sbjct: 578 HGRGEEALQI 587
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/423 (28%), Positives = 183/423 (43%), Gaps = 81/423 (19%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQ----------IHSQIIINGFSQKNYILAKLLAFYVTSGY 67
LTT + + T TLF H Q+++ G +++ Y+T
Sbjct: 36 LTTFFFSTASSTTDLTSTLFHQCKSLASAELTHQQLLVQGLPHDP---THIISMYLTFNS 92
Query: 68 LINAHKVFEKTENPSTAI--WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
A V + S + WNQ+IR E + LY++M PD YT+ F+L
Sbjct: 93 PAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVL 152
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV-GCARLLFDDMPA 184
C FR G VH V ASG+ NVF+ L+++Y G CG AR +FD+M
Sbjct: 153 KACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMY----GRCGAWENARQVFDEMRE 208
Query: 185 RSV---VSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
R V VSWNS++ Y++ GD A K+F+ M
Sbjct: 209 RGVGDLVSWNSIVAAYMQGGDSIRAMKMFERM---------------------------- 240
Query: 242 NEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHM 301
+ D V+LV L ACA +G GK +H Y S E V V NA++ M
Sbjct: 241 --TEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALR--SGLFEDVFV--GNAVVDM 294
Query: 302 YASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDE 361
YA CG +EEA VF +M+ ++ VSW +M+TG+++ G +AL
Sbjct: 295 YAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDAL------------------ 336
Query: 362 GRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM---KPNDAVLGSLL 418
FE + + I+ + + ++ +++ GL EA + + M + +PN L SLL
Sbjct: 337 --GLFEKIREE-KIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLL 393
Query: 419 LGC 421
GC
Sbjct: 394 SGC 396
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 168/520 (32%), Positives = 270/520 (51%), Gaps = 59/520 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYV---TSGYLINAHKVFEKTENPSTAIWNQMIRGHA 94
Q+HS++I G + + L+ Y G + ++ KVFE+ + W +I +A
Sbjct: 72 QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYA 131
Query: 95 RS-ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNV 153
+S E ++++ L+ +MI P+ +++S +L C GEQV+
Sbjct: 132 QSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS----------- 180
Query: 154 FIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
Y + G V C NSL+ Y + G ++ A K FD +
Sbjct: 181 ---------YAVKLGIASVNCVG--------------NSLISMYARSGRMEDARKAFDIL 217
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK 273
+N+VS+ ++ G A+N KS +A LFNE+ +G+ + LS A IG + G+
Sbjct: 218 FEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGE 277
Query: 274 WIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF 333
IH + + + + NALI MY+ CG IE A+ VF +M+ RN +SWTSMITGF
Sbjct: 278 QIHGRLLKGGYKSNQCIC----NALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGF 333
Query: 334 AKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
AK G+A AL +T++ VLSACSH G + EG++ F M + GI PR
Sbjct: 334 AKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPR 393
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
+EHY CMVDL R+GL+ EA + +MP+ + V +LL CR+H N EL A+ ++
Sbjct: 394 MEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAE-MI 452
Query: 439 AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVA 498
E +P+ A Y+ L++N++A+A +W+DV +R+ M + + K G SW+++ +H F
Sbjct: 453 LEQEPDDPAAYI-LLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHV 511
Query: 499 GDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
G++++ QA IY+ L ++ + + GY PD + IEE
Sbjct: 512 GETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEE 551
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 176/399 (44%), Gaps = 51/399 (12%)
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
A+KVF+K + W MI A+ ++ L+ M PD +TYS +LS C
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 131 CGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSW 190
GL G+Q+H RV+ G +V + +L+++Y + V +R +F+ MP +V+SW
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG 250
+++ Y + G+ D ++A+ LF +M +
Sbjct: 124 TAIITAYAQSGECD------------------------------KEAIELFCKMISGHIR 153
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEE 310
+ + + L AC + D G+ ++SY +G V + N+LI MYA G +E+
Sbjct: 154 PNHFSFSSVLKACGNLSDPYTGEQVYSYA---VKLGIASV-NCVGNSLISMYARSGRMED 209
Query: 311 AYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALL---------------TFLGVLSACSH 355
A F + +N VS+ +++ G+AK ++EA L TF +LS +
Sbjct: 210 ARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAAS 269
Query: 356 GGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLG 415
G + +G Q + + G K ++ ++SR G ++ AF + M + N
Sbjct: 270 IGAMGKGEQIHGRLLKG-GYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDR-NVISWT 327
Query: 416 SLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVA 454
S++ G H A A ++ K++ Y+A+++
Sbjct: 328 SMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 366
>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
[Vitis vinifera]
gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 168/502 (33%), Positives = 260/502 (51%), Gaps = 59/502 (11%)
Query: 56 AKLLAFYVTSGYLINAHKVFE---KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDK 112
KL+ + + A +VFE + + ++W M G++R+ P++++ LY +M+ +
Sbjct: 113 GKLITLFSVCRRVDEARRVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEALLLYYEMVCQ 172
Query: 113 ETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV 172
+ + +S L C+ G + G VH +VL +
Sbjct: 173 FGQLGNFAFSMALKACSDLGDLQTGRAVHAQVLKA------------------------- 207
Query: 173 GCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNG 232
+ P + V N+LL+ Y + G D A ++FD MPHRNVVSW ++I+G +
Sbjct: 208 -------TEDPDQVVN--NALLRLYSEDGCFDEALRVFDGMPHRNVVSWNSLIAGLVKKD 258
Query: 233 KSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLV 292
+A+ F M+ +G V L L CA + L GK IH+ + ++ + PVL
Sbjct: 259 GVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVL- 317
Query: 293 SLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------- 343
N+L+ MYA CG ++ VF MQ ++ SW ++ITG+A G EA+
Sbjct: 318 ---NSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICS 374
Query: 344 ------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDE 397
+TF+ +LS CSH G D+G + FE M ++GI P +EHY C+VD+ RAG + E
Sbjct: 375 GFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEHYACLVDVLGRAGRIKE 434
Query: 398 AFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVY 457
A +V+NMP KP ++ GSLL CR+H N LA VA++L E++P A Y+ L +N+Y
Sbjct: 435 ALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLF-ELEPNNAGNYVML-SNIY 492
Query: 458 AAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEIT 517
A A W+ V VR+ M K G+ K G SW+QI +H FVAG S + S+ YK + +
Sbjct: 493 ANAGMWESVKVVREFMEKRGMTKEAGCSWLQIKSKIHTFVAGGSNEFRNSVEYKKVWKRL 552
Query: 518 MQAMQE-GYKPDISELFLGIEE 538
M+AM+E GY PD + + E
Sbjct: 553 MEAMEEVGYVPDTGVVLHDVSE 574
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH+ I+ + +L L+ Y G + +VF + WN +I G+A +
Sbjct: 300 EIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAING 359
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+++ +++MI PD T+ LLS C+ GL +G
Sbjct: 360 RMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDG 399
>gi|222619165|gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japonica Group]
Length = 706
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 168/482 (34%), Positives = 259/482 (53%), Gaps = 36/482 (7%)
Query: 81 PSTAI-WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE- 138
P+T + N ++R AR P + ++ D PD Y+++FL+
Sbjct: 159 PATLLAHNSLLRALARGRRPHLAFGAFR---DLPLAPDNYSFTFLVRAATALAAAAASAL 215
Query: 139 -------QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWN 191
VH L G+ + +++ +++Y +G VG AR F ++ + VV
Sbjct: 216 DAALIAGSVHASALRHGHAGDPHVQSGAVSMYAAAGD---VGAARAAFAEIASPDVVCVT 272
Query: 192 SLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL 251
+++ G+ D A ++FD MP R+ V+W MI+G G+SR+AL LF+EMR A +
Sbjct: 273 AMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAV 332
Query: 252 DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEA 311
+V LV+AL+ACA++G L+ GKW+HS S G + V+L ALI MY+ CG + A
Sbjct: 333 GEVTLVSALTACAQLGALERGKWVHSCAH---SRGMR-LSVTLGTALIDMYSKCGAVAAA 388
Query: 312 YGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHG 356
VF M RN +WTS ++G A G ++ L +TF+ VL CS
Sbjct: 389 MEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMA 448
Query: 357 GFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGS 416
G VDEGR F+ M N GI P +EHYGCMVDL+ RAG +D+A + + MP++P++ V G+
Sbjct: 449 GLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGA 508
Query: 417 LLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKM 476
LL RIH N EL KL+A I+ + A ++ L++N+YA ++ W+ V+ VR M
Sbjct: 509 LLNASRIHKNVELGKYAMDKLMA-IESKNDAAHV-LLSNIYADSQNWKGVSNVRNMMKAK 566
Query: 477 GVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGI 536
GV+K PG S +++ G +H+F G T+ + I L E+ + +GY + E+ I
Sbjct: 567 GVKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDI 626
Query: 537 EE 538
EE
Sbjct: 627 EE 628
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 171/506 (33%), Positives = 264/506 (52%), Gaps = 56/506 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H + G + + + Y+ G + +A +F+K + WN MI G A+ +
Sbjct: 356 EVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQK 415
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ L+ QM + PD T+ +LS ++VH + +G
Sbjct: 416 CGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAG--------- 466
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L++L VG N+L+ Y K G+ A ++FD+M RN
Sbjct: 467 -LVDLR--------VG-----------------NALVHMYAKCGNTMYAKQVFDDMVERN 500
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
V +WT MISG AQ+G +A SLF +M R + D V+ LSACA G L+ K +HS
Sbjct: 501 VTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHS 560
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
+ V + + NAL+HMYA CG +++A VF M R+ SWT MI G A+ G
Sbjct: 561 HAVNAGLVSD----LRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHG 616
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+AL +F+ VLSACSH G VDEGR+ F + Q++GI+P +EHY
Sbjct: 617 RGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHY 676
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
CMVDL RAG ++EA + NMP++P DA G+LL C + N E+A + A K ++
Sbjct: 677 TCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMA-EFAAKERLKLK 735
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P+ A+ Y+ L++N+YAA W+ VR M + G+RK PG+SW++++ +H FV GD++
Sbjct: 736 PKSASTYV-LLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTS 794
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPD 528
+ ++ IY L ++ + EGY PD
Sbjct: 795 HPESKEIYAKLKDLIKRLKAEGYVPD 820
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 186/413 (45%), Gaps = 70/413 (16%)
Query: 89 MIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASG 148
MI G+A E ++ +Y QM + +P+E TY +L C + G+++H ++ SG
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 149 YCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWK 208
+ S+V + T L+N+Y VK G ID A
Sbjct: 61 FQSDVRVETALVNMY----------------------------------VKCGSIDDAQL 86
Query: 209 IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGD 268
IFD+M RNV+SWT MI G A G+ ++A F +M+R + V+ L+A A G
Sbjct: 87 IFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGA 146
Query: 269 LKLGKWIHSY-VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
L+ K +HS+ V ++ + + NAL+HMYA G I++A VF M R+ SWT
Sbjct: 147 LEWVKEVHSHAVNAGLALD-----LRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWT 201
Query: 328 SMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQN---------WGIKPR 378
MI G A+ G QEA FL + GG + + +N + W +K
Sbjct: 202 VMIGGLAQHGRGQEAFSLFLQM----ERGGCLPNLTTYLSILNASAITSTGALEW-VKEV 256
Query: 379 IEHYG------------CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNN 426
+H G ++ ++++ G +D+A + M + D + + ++G N
Sbjct: 257 HKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDR--DVISWNAMIGGLAQNG 314
Query: 427 -AELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
A + K+ E + YL+L+ N + + W+ V V + +++G+
Sbjct: 315 CGHEAFTIFLKMQQEGFVPDSTTYLSLL-NTHVSTGAWEWVKEVHKHAVEVGL 366
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 165/383 (43%), Gaps = 55/383 (14%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H GF + L+ Y G + +A VF+ + WN MI G A++
Sbjct: 255 EVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNG 314
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
++ ++ +M + PD TY LL+ G + ++VH + G S++ + +
Sbjct: 315 CGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGS 374
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
+++Y ++ G ID A IFD++ RN
Sbjct: 375 AFVHMY----------------------------------IRCGSIDDAQLIFDKLAVRN 400
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
V +W MI G AQ R+ALSLF +MRR D V LSA L+ K +HS
Sbjct: 401 VTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHS 460
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y ++ V + + NAL+HMYA CG A VF M RN +WT MI+G A+ G
Sbjct: 461 Y-----AIDAGLVDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHG 515
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
EA T++ +LSAC+ G ++ ++ N G+ +
Sbjct: 516 CGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKE-VHSHAVNAGLVSDLRVG 574
Query: 383 GCMVDLFSRAGLMDEAFSLVQNM 405
+V ++++ G +D+A + +M
Sbjct: 575 NALVHMYAKCGSVDDARRVFDDM 597
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 153/339 (45%), Gaps = 48/339 (14%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH+ II +GF + L+ YV G + +A +F+K + W MI G A
Sbjct: 51 KIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYG 110
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ + + QM + P+ YTY +L+ A G ++VH + +G ++ +
Sbjct: 111 RGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGN 170
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y SG + AR++FD M R + SW
Sbjct: 171 ALVHMYAKSG---SIDDARVVFDGMVERDIFSW--------------------------- 200
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACA--EIGDLKLGKWI 275
T MI G AQ+G+ ++A SLF +M R + ++ L+A A G L+ K +
Sbjct: 201 ----TVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEV 256
Query: 276 HSYVEENFSVGREPVLVSL--NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF 333
H + G+ + L NALIHMYA CG I++A VF M R+ +SW +MI G
Sbjct: 257 HKH------AGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGL 310
Query: 334 AKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQN 372
A+ G EA FL + GFV + + +N +
Sbjct: 311 AQNGCGHEAFTIFLKM----QQEGFVPDSTTYLSLLNTH 345
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 7/139 (5%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
ML E I+P A T I S + + ++HS + G + L+
Sbjct: 527 MLREGIVP-------DATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVH 579
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y G + +A +VF+ W MI G A+ ++ L+ +M + +P+ Y+
Sbjct: 580 MYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYS 639
Query: 121 YSFLLSVCARCGLFREGEQ 139
+ +LS C+ GL EG +
Sbjct: 640 FVAVLSACSHAGLVDEGRR 658
>gi|296085295|emb|CBI29027.3| unnamed protein product [Vitis vinifera]
Length = 384
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 149/372 (40%), Positives = 221/372 (59%), Gaps = 25/372 (6%)
Query: 168 GECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMIS 226
G CG +G AR +FD+M R+ VSWN++L GY K GD+D A ++F+ MP R+VVSW++MI
Sbjct: 3 GSCGDIGSARKVFDEMLIRNSVSWNAMLDGYAKCGDLDSARQVFESMPDRDVVSWSSMID 62
Query: 227 GCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVG 286
GC + G+ AL++F MR ++V +V+ L ACA +G L+ G+ +H Y+ +N
Sbjct: 63 GCVKGGEYGVALAIFERMRVVGPKANEVTMVSVLCACAHLGALEQGRTMHQYMVDN---- 118
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFR--KMQRRNTVSWTSMITGFAKQGYAQEAL- 343
+ L +L+ MYA CG IEEA VFR M + + + W ++I G A G E+L
Sbjct: 119 TMRFTLVLRTSLMDMYAKCGAIEEAIAVFRGVPMDQTDVLMWNTIIGGLATHGLVHESLE 178
Query: 344 --------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLF 389
+T+L + SAC+HGG V E FF+ + + G+ P+ EHY CMVD+
Sbjct: 179 LFKEMQVLGIVPDEITYLCLFSACAHGGLVHEAWHFFKSLGKQ-GMVPKSEHYACMVDVL 237
Query: 390 SRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGY 449
SRAG + EA+ + MPM+P ++LG+LL GC H +LA +V +KL+ E++P+ Y
Sbjct: 238 SRAGQLAEAYDFIAQMPMEPTASMLGALLNGCMNHRRFDLAERVGRKLI-ELEPDHDGRY 296
Query: 450 LALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLI 509
+ L +NVYA K W + +R+ M + GV+K PG S+V++ G LH F+A D T+ I
Sbjct: 297 IGL-SNVYAGVKLWDNARMMREAMERRGVKKSPGFSFVEVLGTLHRFIAHDKTHNDLEKI 355
Query: 510 YKTLGEITMQAM 521
Y L I Q M
Sbjct: 356 YMMLNTIVRQMM 367
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 11/194 (5%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
+L Y G L +A +VFE + W+ MI G + ++ ++++M + +
Sbjct: 29 MLDGYAKCGDLDSARQVFESMPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRVVGPKAN 88
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCAR 176
E T +L CA G +G +H ++ + + +RT+LM++Y +CG + A
Sbjct: 89 EVTMVSVLCACAHLGALEQGRTMHQYMVDNTMRFTLVLRTSLMDMY----AKCGAIEEAI 144
Query: 177 LLFDDMPA--RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVV----SWTTMISGCAQ 230
+F +P V+ WN+++ G G + + ++F EM +V ++ + S CA
Sbjct: 145 AVFRGVPMDQTDVLMWNTIIGGLATHGLVHESLELFKEMQVLGIVPDEITYLCLFSACAH 204
Query: 231 NGKSRQALSLFNEM 244
G +A F +
Sbjct: 205 GGLVHEAWHFFKSL 218
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 47/166 (28%)
Query: 301 MYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------------- 343
MY SCG+I A VF +M RN+VSW +M+ G+AK G A
Sbjct: 1 MYGSCGDIGSARKVFDEMLIRNSVSWNAMLDGYAKCGDLDSARQVFESMPDRDVVSWSSM 60
Query: 344 -----------------------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWG 374
+T + VL AC+H G +++GR + M N
Sbjct: 61 IDGCVKGGEYGVALAIFERMRVVGPKANEVTMVSVLCACAHLGALEQGRTMHQYMVDN-T 119
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
++ + ++D++++ G ++EA ++ + +PM D ++ + ++G
Sbjct: 120 MRFTLVLRTSLMDMYAKCGAIEEAIAVFRGVPMDQTDVLMWNTIIG 165
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/474 (33%), Positives = 245/474 (51%), Gaps = 56/474 (11%)
Query: 80 NPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
+PST W +I + + +++ + ++ PD +T +L+ CAR GE
Sbjct: 3 HPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETGEA 62
Query: 140 VHGRVL-ASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYV 198
V G +VF+ T ++LY V
Sbjct: 63 VWAAARQEEGVAESVFVATAALDLY----------------------------------V 88
Query: 199 KRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVA 258
K G+++ A +FDEM +R+ V+W M+ G A NG R+AL LF M+ D +V
Sbjct: 89 KCGEMEKARSVFDEMKNRDAVAWGAMVGGYASNGHPREALDLFFAMQMEGAKPDCYTVVG 148
Query: 259 ALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM 318
ALSAC +G L LG+ V + +G PVL ALI MYA CG EA+ VF++M
Sbjct: 149 ALSACTRLGALDLGRQAVGMVHWDEVLGN-PVL---GTALIDMYAKCGSTSEAWMVFQQM 204
Query: 319 QRRNTVSWTSMITGFAKQGYAQEALL---------------TFLGVLSACSHGGFVDEGR 363
R+ + W +MI G G+ + A TF+G+L +C+H G V++GR
Sbjct: 205 LERDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGVKLNDNTFIGLLCSCTHTGLVNDGR 264
Query: 364 QFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRI 423
Q+F M + I PRIEHYGCMVDLFSRAGL++EA L+ +MPM N V G+LL GC+I
Sbjct: 265 QYFHNMTHVYRISPRIEHYGCMVDLFSRAGLLEEAHQLIGDMPMLANAVVWGALLGGCKI 324
Query: 424 HNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPG 483
H NA+LA ++L+ ++P + Y+ +++N+Y+ + RW+D A +R +M G+ K P
Sbjct: 325 HRNADLAEHALKQLI-RLEPWNSGNYV-MLSNIYSNSGRWEDAAKLRLEMKAKGIEKVPA 382
Query: 484 QSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIE 537
SWV+++G +H F GD ++ + IY L E+ M+ GY+P + +E
Sbjct: 383 SSWVELDGKVHKFYVGDDSHPLSDKIYAKLDELGMEMKAMGYEPTTEVVMFDVE 436
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 121/235 (51%), Gaps = 24/235 (10%)
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
MPH + VSWT +I+ G + +A+ + + + D V L+ACA + DL+ G
Sbjct: 1 MPHPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETG 60
Query: 273 K--WIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMI 330
+ W + EE + E V V+ A + +Y CGE+E+A VF +M+ R+ V+W +M+
Sbjct: 61 EAVWAAARQEEGVA---ESVFVA--TAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMV 115
Query: 331 TGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGI 375
G+A G+ +EAL T +G LSAC+ G +D GRQ ++ + +
Sbjct: 116 GGYASNGHPREALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVL 175
Query: 376 KPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELA 430
+ ++D++++ G EA+ + Q M ++ + V +++LG + + ++A
Sbjct: 176 GNPVLGTA-LIDMYAKCGSTSEAWMVFQQM-LERDIIVWNAMILGLGMTGHEKIA 228
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 116/288 (40%), Gaps = 40/288 (13%)
Query: 47 GFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLY 106
G ++ ++ L YV G + A VF++ +N W M+ G+A + P +++ L+
Sbjct: 72 GVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYASNGHPREALDLF 131
Query: 107 KQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMS 166
M + +PD YT LS C R G G Q G V N + T L+++Y
Sbjct: 132 FAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVLGTALIDMY--- 188
Query: 167 GGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMI 225
+CG A ++F M R ++ WN+ MI
Sbjct: 189 -AKCGSTSEAWMVFQQMLERDIIVWNA-------------------------------MI 216
Query: 226 SGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSV 285
G G + A +L +M+++ V L+ + L +C G + G+ Y V
Sbjct: 217 LGLGMTGHEKIAFALVGQMKKSGVKLNDNTFIGLLCSCTHTGLVNDGR---QYFHNMTHV 273
Query: 286 GREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR-RNTVSWTSMITG 332
R + ++ +++ G +EEA+ + M N V W +++ G
Sbjct: 274 YRISPRIEHYGCMVDLFSRAGLLEEAHQLIGDMPMLANAVVWGALLGG 321
>gi|296085273|emb|CBI29005.3| unnamed protein product [Vitis vinifera]
Length = 587
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 144/354 (40%), Positives = 221/354 (62%), Gaps = 22/354 (6%)
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAAL 260
G D A+ +F EMP R+VVSW +M++ AQ GK +AL+LF++MR V + +V+ L
Sbjct: 162 GKRDDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLL 221
Query: 261 SACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQR 320
SACA +G L G +H+Y+ +N R V + AL+ MYA CG+I A VF M+
Sbjct: 222 SACAHLGALDKGLHLHTYINDN----RIEVNSIVGTALVDMYAKCGKISLATQVFNAMES 277
Query: 321 RNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQF 365
++ ++W ++I G A G+ +EA +TF+ +LSACSH G VDEG++
Sbjct: 278 KDVLAWNTIIAGMAIHGHVKEAQRLFKEMKEAGVEPNDITFVAMLSACSHAGMVDEGQKL 337
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHN 425
+CM+ ++GI+P++EHYGC++DL +RAGL++EA L+ MPM+PN LG+LL GCRIH
Sbjct: 338 LDCMSSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTMPMEPNPCALGALLGGCRIHG 397
Query: 426 NAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQS 485
N EL V ++L+ + P + Y+ L++N+YAAAK+W D VR M G+ K PG S
Sbjct: 398 NFELGEMVGKRLI-NLQPCHSGRYI-LLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVS 455
Query: 486 WVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQE-GYKPDISELFLGIEE 538
+++ G++H FVAGD ++ +++ IY+ L EI + G+ D ++ L +EE
Sbjct: 456 VIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGHSADTGDVLLDMEE 509
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 112/255 (43%), Gaps = 37/255 (14%)
Query: 64 TSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSF 123
T G +A +F + WN M+ +A+ P +++ L+ QM +P E T
Sbjct: 160 TFGKRDDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVS 219
Query: 124 LLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMP 183
LLS CA G +G +H +I N + + + G
Sbjct: 220 LLSACAHLGALDKGLHLH-----------TYINDNRIEVNSIVG---------------- 252
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE 243
+L+ Y K G I A ++F+ M ++V++W T+I+G A +G ++A LF E
Sbjct: 253 -------TALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQRLFKE 305
Query: 244 MRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
M+ A V + + VA LSAC+ G + G+ + + ++ G EP V +I + A
Sbjct: 306 MKEAGVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSY--GIEPK-VEHYGCVIDLLA 362
Query: 304 SCGEIEEAYGVFRKM 318
G +EEA + M
Sbjct: 363 RAGLLEEAMELIGTM 377
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%)
Query: 37 FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS 96
+H+ I N + + L+ Y G + A +VF E+ WN +I G A
Sbjct: 234 LHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIH 293
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
+++ L+K+M + EP++ T+ +LS C+ G+ EG+++
Sbjct: 294 GHVKEAQRLFKEMKEAGVEPNDITFVAMLSACSHAGMVDEGQKL 337
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 168/520 (32%), Positives = 270/520 (51%), Gaps = 59/520 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYV---TSGYLINAHKVFEKTENPSTAIWNQMIRGHA 94
Q+HS++I G + + L+ Y G + ++ KVFE+ + W +I +A
Sbjct: 77 QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYA 136
Query: 95 RS-ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNV 153
+S E ++++ L+ +MI P+ +++S +L C GEQV+
Sbjct: 137 QSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS----------- 185
Query: 154 FIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
Y + G V C NSL+ Y + G ++ A K FD +
Sbjct: 186 ---------YAVKLGIASVNCVG--------------NSLISMYARSGRMEDARKAFDIL 222
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK 273
+N+VS+ ++ G A+N KS +A LFNE+ +G+ + LS A IG + G+
Sbjct: 223 FEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGE 282
Query: 274 WIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF 333
IH + + + + NALI MY+ CG IE A+ VF +M+ RN +SWTSMITGF
Sbjct: 283 QIHGRLLKGGYKSNQCIC----NALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGF 338
Query: 334 AKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
AK G+A AL +T++ VLSACSH G + EG++ F M + GI PR
Sbjct: 339 AKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPR 398
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
+EHY CMVDL R+GL+ EA + +MP+ + V +LL CR+H N EL A+ ++
Sbjct: 399 MEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAE-MI 457
Query: 439 AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVA 498
E +P+ A Y+ L++N++A+A +W+DV +R+ M + + K G SW+++ +H F
Sbjct: 458 LEQEPDDPAAYI-LLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHV 516
Query: 499 GDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
G++++ QA IY+ L ++ + + GY PD + IEE
Sbjct: 517 GETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEE 556
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 176/399 (44%), Gaps = 51/399 (12%)
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
A+KVF+K + W MI A+ ++ L+ M PD +TYS +LS C
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 131 CGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSW 190
GL G+Q+H RV+ G +V + +L+++Y + V +R +F+ MP +V+SW
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG 250
+++ Y + G+ D ++A+ LF +M +
Sbjct: 129 TAIITAYAQSGECD------------------------------KEAIELFCKMISGHIR 158
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEE 310
+ + + L AC + D G+ ++SY +G V + N+LI MYA G +E+
Sbjct: 159 PNHFSFSSVLKACGNLSDPYTGEQVYSYA---VKLGIASV-NCVGNSLISMYARSGRMED 214
Query: 311 AYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALL---------------TFLGVLSACSH 355
A F + +N VS+ +++ G+AK ++EA L TF +LS +
Sbjct: 215 ARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAAS 274
Query: 356 GGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLG 415
G + +G Q + + G K ++ ++SR G ++ AF + M + N
Sbjct: 275 IGAMGKGEQIHGRLLKG-GYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDR-NVISWT 332
Query: 416 SLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVA 454
S++ G H A A ++ K++ Y+A+++
Sbjct: 333 SMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 371
>gi|242083462|ref|XP_002442156.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
gi|241942849|gb|EES15994.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
Length = 557
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 177/571 (30%), Positives = 292/571 (51%), Gaps = 79/571 (13%)
Query: 10 NPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLI 69
+P S++ + L + + Q+ +Q+++ G L+A +S
Sbjct: 3 SPPPSARLHAGALLAGLARRATSPAAARQLQAQLLVRGLPLPARAAVALIA---SSHSPR 59
Query: 70 NAHKVFEKT---ENPSTAIWNQMIRGHARSET-----PEKSVYLYKQMIDKET-EPDEYT 120
+A VF+ + + +W I +AR + E ++ L++ M+ + P+ +T
Sbjct: 60 HARAVFDSAVPAASENVYLWTATIAAYARHASSSLSAAEGALALFRLMLRRGVPRPNAFT 119
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLF 179
S ++ C+ REG QVHG + ++G + L+++Y G G V AR +F
Sbjct: 120 ASSVVRCCSALRAVREGIQVHGFLFSAGLGRASHVGAALVDMY----GSLGRVADARRVF 175
Query: 180 DDMPARSVV-------------------------------SWNSLLKGYVKRGDIDGAWK 208
D+MP+ +VV SWN+L+ GY+++G+ A
Sbjct: 176 DEMPSTNVVLGNTMVACYVRAGDVEAGRDVFDRMAERDPISWNTLMMGYLRQGEAGVARD 235
Query: 209 IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGD 268
+F+EMP RNV SW +I+ C+Q G A+ +FN MR AR D + +SACA++G
Sbjct: 236 LFEEMPDRNVNSWNMVIAACSQEGLWADAVEVFNRMRLARFQPDPATMAVLMSACAQLGS 295
Query: 269 LKLGKWIHSY-----VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNT 323
L + +H VE NF V N+LI MYA CG + +A+ +F + + ++T
Sbjct: 296 LSIASQVHGILRKGCVEMNFHV---------LNSLIDMYAKCGSVSQAHLLFVETRLKDT 346
Query: 324 VSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFEC 368
VS+ MI A+ G+ ++AL +TFLGVLSAC+H G V +G+ +FE
Sbjct: 347 VSYNVMICALAQHGHGRDALQIFDEMSEEGLQPDAVTFLGVLSACAHAGLVHDGKFYFES 406
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAE 428
M N+ I+ +HY CMVDL+ RAGL++EA+ L + MP+KP+ V G+L+ CR H N E
Sbjct: 407 MRTNYAIEQSPDHYACMVDLYGRAGLIEEAYQLARAMPVKPHAGVWGALINACRKHCNVE 466
Query: 429 LASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
+ A++L+A I+P Y+ L+AN A ++W V V Q M G+ K G SW++
Sbjct: 467 VGKVAARELIA-IEPGNPGTYV-LLANTLARGQQWDFVETVWQSMRGKGIEKTAGCSWLE 524
Query: 489 INGVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
++ V+H+F+ G+S++ + IY L + +Q
Sbjct: 525 VDRVVHEFLMGESSHPNSDEIYCILEHLYLQ 555
>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 544
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 153/397 (38%), Positives = 232/397 (58%), Gaps = 28/397 (7%)
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
++++ Y +SG VG A+ LF+ + A + V+W S++ G+ + GD++ A ++F+EMP R+
Sbjct: 82 SMIHGYAVSGD---VGSAQRLFERVLAPTPVTWTSMVAGFCRAGDVESARRVFEEMPERD 138
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+VSW MISGC N +AL LF M ++ +V+ LSAC G L+ GKW+H
Sbjct: 139 LVSWNAMISGCVGNRLPVEALCLFRWMMEEGFVPNRGTVVSVLSACTGAGALETGKWVHV 198
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
+VE+ E L AL+ MYA CG +E A VF ++ RNT +W +MI G A G
Sbjct: 199 FVEKKRLRWDE----FLGTALVDMYAKCGAVELALEVFTGLRARNTCTWNAMINGLAMNG 254
Query: 338 YAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
Y+ +AL +TF+GVL ACSH GFVD G++ F + Q +G++ +EH
Sbjct: 255 YSAKALDMFRQMELNGTVAPDEVTFVGVLLACSHAGFVDAGKEHFYTIPQKYGVELILEH 314
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
Y CMVDL +R+G + EA L+ MPMKP+ V +LL GCR+H N ++A V ++ A
Sbjct: 315 YACMVDLLARSGHLQEAHKLITEMPMKPDVVVWRALLGGCRLHKNVKMAENVISEMEA-- 372
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+G L++N+YAA RW V VR+ M G+ K PG S V+++G +H+F++GD
Sbjct: 373 ---TCSGDHVLLSNLYAAVGRWNGVEDVRRTMRSKGIEKIPGCSSVEMDGSIHEFISGDK 429
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++ I+ L EI + Q GY + +E+F IE+
Sbjct: 430 SHPSYDDIHAKLIEIGGRMQQHGYVTETAEVFYDIED 466
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 140/334 (41%), Gaps = 52/334 (15%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA-----------F 61
++ + R++F + R+T IH + + ++LA
Sbjct: 58 SAGRVTDARRVFDGMPRRDTVSFNSMIHGYAVSGDVGSAQRLFERVLAPTPVTWTSMVAG 117
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
+ +G + +A +VFE+ WN MI G + P +++ L++ M+++ P+ T
Sbjct: 118 FCRAGDVESARRVFEEMPERDLVSWNAMISGCVGNRLPVEALCLFRWMMEEGFVPNRGTV 177
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFD 180
+LS C G G+ VH V + F+ T L+++Y +CG V A +F
Sbjct: 178 VSVLSACTGAGALETGKWVHVFVEKKRLRWDEFLGTALVDMY----AKCGAVELALEVFT 233
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSL 240
+ AR+ +WN+ MI+G A NG S +AL +
Sbjct: 234 GLRARNTCTWNA-------------------------------MINGLAMNGYSAKALDM 262
Query: 241 FNEMR-RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
F +M V D+V V L AC+ G + GK + + + V +++ ++
Sbjct: 263 FRQMELNGTVAPDEVTFVGVLLACSHAGFVDAGKEHFYTIPQKYGV---ELILEHYACMV 319
Query: 300 HMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITG 332
+ A G ++EA+ + +M + + V W +++ G
Sbjct: 320 DLLARSGHLQEAHKLITEMPMKPDVVVWRALLGG 353
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 48/114 (42%), Gaps = 25/114 (21%)
Query: 295 NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACS 354
NNA I Y S G + +A VF M RR+TVS+ SMI G+A G A F VL+
Sbjct: 49 NNAFIQGYCSAGRVTDARRVFDGMPRRDTVSFNSMIHGYAVSGDVGSAQRLFERVLA--- 105
Query: 355 HGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
P + MV F RAG ++ A + + MP +
Sbjct: 106 ----------------------PTPVTWTSMVAGFCRAGDVESARRVFEEMPER 137
>gi|15232821|ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g47530
gi|6522536|emb|CAB61979.1| putative protein [Arabidopsis thaliana]
gi|62320272|dbj|BAD94558.1| hypothetical protein [Arabidopsis thaliana]
gi|332644772|gb|AEE78293.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/485 (33%), Positives = 255/485 (52%), Gaps = 60/485 (12%)
Query: 73 KVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEP-DEYTYSFLLSVCARC 131
+VF + NP+ + N MIR + S+TP + L++ + + P + + SF L C +
Sbjct: 67 RVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKS 126
Query: 132 GLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWN 191
G G Q+HG++ + G+ S+ + T LM+LY S E + +FD++P R VSWN
Sbjct: 127 GDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLY--STCENSTDACK-VFDEIPKRDTVSWN 183
Query: 192 SLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL 251
L Y++ N ++R L LF++M+ G
Sbjct: 184 VLFSCYLR-------------------------------NKRTRDVLVLFDKMKNDVDGC 212
Query: 252 ---DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEI 308
D V + AL ACA +G L GK +H +++EN G ++L+N L+ MY+ CG +
Sbjct: 213 VKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGA----LNLSNTLVSMYSRCGSM 268
Query: 309 EEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF---------------LGVLSAC 353
++AY VF M+ RN VSWT++I+G A G+ +EA+ F G+LSAC
Sbjct: 269 DKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSAC 328
Query: 354 SHGGFVDEGRQFFECMNQ-NWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDA 412
SH G V EG FF+ M + IKP + HYGC+VDL RA L+D+A+SL+++M MKP+
Sbjct: 329 SHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDST 388
Query: 413 VLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQK 472
+ +LL CR+H + EL +V L+ E+ E+A Y+ L+ N Y+ +W+ V +R
Sbjct: 389 IWRTLLGACRVHGDVELGERVISHLI-ELKAEEAGDYV-LLLNTYSTVGKWEKVTELRSL 446
Query: 473 MIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISEL 532
M + + PG S +++ G +H+F+ D ++ + IYK L EI Q GY +I+
Sbjct: 447 MKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSE 506
Query: 533 FLGIE 537
+E
Sbjct: 507 LHNLE 511
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 113/249 (45%), Gaps = 22/249 (8%)
Query: 7 IPANPATSSKALTTRQIFSLLQIRNTTKTL--FQIHSQIIINGFSQKNYILAKLLAFYVT 64
+PANP +SS F+L + L QIH +I +GF + ++ L+ Y T
Sbjct: 109 LPANPLSSS--------FALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYST 160
Query: 65 SGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQM---IDKETEPDEYTY 121
+A KVF++ T WN + + R++ + L+ +M +D +PD T
Sbjct: 161 CENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTC 220
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFD 180
L CA G G+QVH + +G + + L+++Y CG + A +F
Sbjct: 221 LLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMY----SRCGSMDKAYQVFY 276
Query: 181 DMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVV----SWTTMISGCAQNGKSRQ 236
M R+VVSW +L+ G G A + F+EM + + T ++S C+ +G +
Sbjct: 277 GMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAE 336
Query: 237 ALSLFNEMR 245
+ F+ MR
Sbjct: 337 GMMFFDRMR 345
>gi|357117491|ref|XP_003560501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Brachypodium distachyon]
Length = 652
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 150/406 (36%), Positives = 237/406 (58%), Gaps = 28/406 (6%)
Query: 145 LASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDID 204
L G+ + F+ +L+ Y+ G VG AR +FD+M + V+ W S++ Y + D+
Sbjct: 173 LVGGFDKHRFVENSLIGAYIACGD---VGAARKVFDEMVVKDVICWTSIVVAYSRSRDMG 229
Query: 205 GAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACA 264
A ++F + P +++V+WT M++G AQN +AL +F+ M +G+D+V+L A+SACA
Sbjct: 230 SAEEVFGQCPVKDMVAWTAMVTGYAQNAMPMKALEVFDRMTALGIGIDEVSLTGAISACA 289
Query: 265 EIGDLKLGKWIHSYVEEN-FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNT 323
++G +K W+ E N F + V + + L+ MYA CG I+EA VF MQ +N
Sbjct: 290 QLGAVKRAAWVQEIAEMNGFGMN-----VVVGSGLVDMYAKCGLIDEACKVFDGMQEKNV 344
Query: 324 VSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFE 367
+++SM+ G A G A+EA+ +TF+GVL+ACSH G V +GR +F
Sbjct: 345 YTYSSMVVGLASHGRAREAIALFKDMVRRADVAPNHVTFIGVLTACSHAGMVTDGRYYFA 404
Query: 368 CMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNA 427
M +GI P +HY CMVDL RAGL+DEA LV++M ++P+ V G+LL CRIH
Sbjct: 405 QMKDKYGILPSADHYTCMVDLLGRAGLVDEALDLVRSMTVEPHGGVWGALLGACRIHGKT 464
Query: 428 ELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWV 487
E+A A+ L +++PE Y+ L++N AAA +W +V+ VR+ M ++K P SW
Sbjct: 465 EVAKVAAEHLF-KLEPEGIGNYV-LLSNTLAAAGKWDEVSKVRKVMRSRRLKKVPAVSWF 522
Query: 488 Q-INGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISEL 532
+ +G++H F AGD+++ + I K L E+ + GY P +S +
Sbjct: 523 EGRDGLVHQFFAGDNSHPRTREIKKALLELVAKLKHAGYVPILSSI 568
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 132/311 (42%), Gaps = 73/311 (23%)
Query: 42 QIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET--- 98
++ GF + ++ L+ Y+ G + A KVF++ W ++ ++RS
Sbjct: 171 SFLVGGFDKHRFVENSLIGAYIACGDVGAARKVFDEMVVKDVICWTSIVVAYSRSRDMGS 230
Query: 99 ----------------------------PEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
P K++ ++ +M DE + + +S CA+
Sbjct: 231 AEEVFGQCPVKDMVAWTAMVTGYAQNAMPMKALEVFDRMTALGIGIDEVSLTGAISACAQ 290
Query: 131 CGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSW 190
G + V +G+ NV + + L+++Y +CG+
Sbjct: 291 LGAVKRAAWVQEIAEMNGFGMNVVVGSGLVDMY----AKCGL------------------ 328
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM-RRARV 249
ID A K+FD M +NV ++++M+ G A +G++R+A++LF +M RRA V
Sbjct: 329 ------------IDEACKVFDGMQEKNVYTYSSMVVGLASHGRAREAIALFKDMVRRADV 376
Query: 250 GLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNN--ALIHMYASCGE 307
+ V + L+AC+ G + G++ + +++ + +L S ++ ++ + G
Sbjct: 377 APNHVTFIGVLTACSHAGMVTDGRYYFAQMKDKYG-----ILPSADHYTCMVDLLGRAGL 431
Query: 308 IEEAYGVFRKM 318
++EA + R M
Sbjct: 432 VDEALDLVRSM 442
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 174/550 (31%), Positives = 276/550 (50%), Gaps = 64/550 (11%)
Query: 11 PATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLIN 70
P SS + SL I + +T H Q + G+ ++ + L+ Y T G L +
Sbjct: 74 PTRSSFPCAIKACSSLFDIFSGKQT----HQQAFVFGYQSDIFVSSALIVMYSTCGKLED 129
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY------SFL 124
A KVF++ + W MIRG+ + +V L+K ++ E + D+ + +
Sbjct: 130 ARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSV 189
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPA 184
+S C+R E +H V+ G+ V + L++ Y GGE GV AR
Sbjct: 190 ISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAY-AKGGEGGVAVAR-------- 240
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
KIFD++ ++ VS+ +++S AQ+G S +A +F +
Sbjct: 241 -----------------------KIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL 277
Query: 245 RRARV-GLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
+ +V + + L L A + G L++GK IH V +G E ++ + ++I MY
Sbjct: 278 VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQV---IRMGLEDDVI-VGTSIIDMYC 333
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLG 348
CG +E A F +M+ +N SWT+MI G+ G+A +AL +TF+
Sbjct: 334 KCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVS 393
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
VL+ACSH G EG ++F M +G++P +EHYGCMVDL RAG + +A+ L+Q M MK
Sbjct: 394 VLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK 453
Query: 409 PNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAA 468
P+ + SLL CRIH N ELA +L E+D GY L++++YA A RW+DV
Sbjct: 454 PDSIIWSSLLAACRIHKNVELAEISVARLF-ELDSSN-CGYYMLLSHIYADAGRWKDVER 511
Query: 469 VRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
VR M G+ KPPG S +++NG +H F+ GD + Q IY+ L E+ + ++ GY +
Sbjct: 512 VRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSN 571
Query: 529 ISELFLGIEE 538
S + ++E
Sbjct: 572 TSSVCHDVDE 581
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 177/404 (43%), Gaps = 77/404 (19%)
Query: 86 WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVL 145
WN +I ARS +++ + M P ++ + C+ G+Q H +
Sbjct: 44 WNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAF 103
Query: 146 ASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDID 204
GY S++F+ + L+ +Y CG + AR +FD++P R++VSW S+++GY D+
Sbjct: 104 VFGYQSDIFVSSALIVMY----STCGKLEDARKVFDEIPKRNIVSWTSMIRGY----DL- 154
Query: 205 GAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM------RRARVGLDQVALVA 258
NG + A+SLF ++ + LD + LV+
Sbjct: 155 --------------------------NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVS 188
Query: 259 ALSACAEIGDLKLGKWIHSYV-EENFSVGREPVLVSLNNALIHMYASCGE--IEEAYGVF 315
+SAC+ + L + IHS+V + F G VS+ N L+ YA GE + A +F
Sbjct: 189 VISACSRVPAKGLTESIHSFVIKRGFDRG-----VSVGNTLLDAYAKGGEGGVAVARKIF 243
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFV 359
++ ++ VS+ S+++ +A+ G + EA +T VL A SH G +
Sbjct: 244 DQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGAL 303
Query: 360 DEGRQFFECMNQN---WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGS 416
G+ C++ G++ + ++D++ + G ++ A M K N +
Sbjct: 304 RIGK----CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNK-NVRSWTA 358
Query: 417 LLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAA 460
++ G +H +A A ++ A ID Y+ V+ + A +
Sbjct: 359 MIAGYGMHGHAAKALEL---FPAMIDSGVRPNYITFVSVLAACS 399
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 82/134 (61%), Gaps = 4/134 (2%)
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
+V SW ++I+ A++G S +AL F+ MR+ + + + A+ AC+ + D+ GK H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
++ F G + + +++ALI MY++CG++E+A VF ++ +RN VSWTSMI G+
Sbjct: 100 ---QQAFVFGYQSDIF-VSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 337 GYAQEALLTFLGVL 350
G A +A+ F +L
Sbjct: 156 GNALDAVSLFKDLL 169
>gi|255584555|ref|XP_002533004.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527215|gb|EEF29379.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 154/464 (33%), Positives = 256/464 (55%), Gaps = 24/464 (5%)
Query: 65 SGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFL 124
S ++ ++F++ +I AR E+++ L+ +M+ +P+E+T++ +
Sbjct: 46 SNIRMDVDELFDEMPELDVLSVTTLIGRFARQHRYEEAMCLFSRMLLLNIKPNEFTFATV 105
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPA 184
+ G+Q+H R + G + VF+ + +++ Y C AR F+D+
Sbjct: 106 IHSSTGLKNIYLGKQLHARTMKMGLNTIVFVGSAMLDFY---AKLCSFEEARNAFEDIQK 162
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
+VVS+ +L+ GY+K+G ID A ++F EMP RNVVSW M+ G +Q G + +A+SLF EM
Sbjct: 163 PNVVSYTTLIHGYLKKGKIDDALQLFQEMPERNVVSWNAMVGGFSQMGHNEEAVSLFIEM 222
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYAS 304
R +Q A+++ A + L +GK H+ ++ V + N+L+ YA
Sbjct: 223 LREGFMPNQSTFPCAITSAANMASLGMGKSFHACAVKSLCTSD----VFVCNSLVSFYAK 278
Query: 305 CGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALL---------------TFLGV 349
CG +E++ VF ++ RNTVSW ++I GFA+ G ++A++ T LG+
Sbjct: 279 CGSMEDSLLVFNELPDRNTVSWNAVICGFAQNGRGEDAVIFFERMRAAGLRPNSVTLLGL 338
Query: 350 LSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKP 409
L AC+H G V++G +F M Q + EHY CMVDL SR G + EA + ++P P
Sbjct: 339 LCACNHAGLVEKGYMYFNQMRQEEPGILKPEHYACMVDLLSRFGRLKEAAKFLHDLPFDP 398
Query: 410 NDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAV 469
+LL GC IH+NAEL+ AQK++A +DPE + Y+ L +N Y+AA RWQ V+ +
Sbjct: 399 GTGFWKALLGGCHIHSNAELSDLAAQKILA-LDPEDVSSYVML-SNAYSAAGRWQQVSTI 456
Query: 470 RQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTL 513
R++M + G+++ PG SW+++ +H F+ D + Q IY L
Sbjct: 457 RREMKEKGLKRIPGCSWIEVRSKIHVFLNSDKNHHQKEEIYSFL 500
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 109/250 (43%), Gaps = 40/250 (16%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENP-----STAI------- 85
Q+H++ + G + ++ + +L FY A FE + P +T I
Sbjct: 120 QLHARTMKMGLNTIVFVGSAMLDFYAKLCSFEEARNAFEDIQKPNVVSYTTLIHGYLKKG 179
Query: 86 -------------------WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLS 126
WN M+ G ++ E++V L+ +M+ + P++ T+ ++
Sbjct: 180 KIDDALQLFQEMPERNVVSWNAMVGGFSQMGHNEEAVSLFIEMLREGFMPNQSTFPCAIT 239
Query: 127 VCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPAR 185
A G+ H + S S+VF+ +L++ Y +CG + + L+F+++P R
Sbjct: 240 SAANMASLGMGKSFHACAVKSLCTSDVFVCNSLVSFY----AKCGSMEDSLLVFNELPDR 295
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMP----HRNVVSWTTMISGCAQNGKSRQALSLF 241
+ VSWN+++ G+ + G + A F+ M N V+ ++ C G + F
Sbjct: 296 NTVSWNAVICGFAQNGRGEDAVIFFERMRAAGLRPNSVTLLGLLCACNHAGLVEKGYMYF 355
Query: 242 NEMRRARVGL 251
N+MR+ G+
Sbjct: 356 NQMRQEEPGI 365
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 174/550 (31%), Positives = 275/550 (50%), Gaps = 64/550 (11%)
Query: 11 PATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLIN 70
P SS + SL I + +T H Q + G+ ++ + L+ Y T G L +
Sbjct: 74 PTRSSFPCAIKACSSLFDIFSGKQT----HQQAFVFGYQSDIFVSSALIVMYSTCGKLED 129
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY------SFL 124
A KVF++ W MIRG+ + +V L+K ++ E + D+ + +
Sbjct: 130 ARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSV 189
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPA 184
+S C+R E +H V+ G+ V + L++ Y GGE GV AR
Sbjct: 190 ISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAY-AKGGEGGVAVAR-------- 240
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
KIFD++ ++ VS+ +++S AQ+G S +A +F +
Sbjct: 241 -----------------------KIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL 277
Query: 245 RRARV-GLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
+ +V + + L L A + G L++GK IH V +G E ++ + ++I MY
Sbjct: 278 VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQV---IRMGLEDDVI-VGTSIIDMYC 333
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLG 348
CG +E A F +M+ +N SWT+MI G+ G+A +AL +TF+
Sbjct: 334 KCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVS 393
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
VL+ACSH G EG ++F M +G++P +EHYGCMVDL RAG + +A+ L+Q M MK
Sbjct: 394 VLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK 453
Query: 409 PNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAA 468
P+ + SLL CRIH N ELA +L E+D GY L++++YA A RW+DV
Sbjct: 454 PDSIIWSSLLAACRIHKNVELAEISVARLF-ELDSSN-CGYYMLLSHIYADAGRWKDVER 511
Query: 469 VRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
VR M G+ KPPG S +++NG +H F+ GD + Q IY+ L E+ + ++ GY +
Sbjct: 512 VRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSN 571
Query: 529 ISELFLGIEE 538
S + ++E
Sbjct: 572 TSSVCHDVDE 581
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 176/404 (43%), Gaps = 77/404 (19%)
Query: 86 WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVL 145
WN +I ARS +++ + M P ++ + C+ G+Q H +
Sbjct: 44 WNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAF 103
Query: 146 ASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDID 204
GY S++F+ + L+ +Y CG + AR +FD++P R +VSW S+++GY D+
Sbjct: 104 VFGYQSDIFVSSALIVMY----STCGKLEDARKVFDEIPKRDIVSWTSMIRGY----DL- 154
Query: 205 GAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM------RRARVGLDQVALVA 258
NG + A+SLF ++ + LD + LV+
Sbjct: 155 --------------------------NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVS 188
Query: 259 ALSACAEIGDLKLGKWIHSYV-EENFSVGREPVLVSLNNALIHMYASCGE--IEEAYGVF 315
+SAC+ + L + IHS+V + F G VS+ N L+ YA GE + A +F
Sbjct: 189 VISACSRVPAKGLTESIHSFVIKRGFDRG-----VSVGNTLLDAYAKGGEGGVAVARKIF 243
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFV 359
++ ++ VS+ S+++ +A+ G + EA +T VL A SH G +
Sbjct: 244 DQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGAL 303
Query: 360 DEGRQFFECMNQN---WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGS 416
G+ C++ G++ + ++D++ + G ++ A M K N +
Sbjct: 304 RIGK----CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNK-NVRSWTA 358
Query: 417 LLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAA 460
++ G +H +A A ++ A ID Y+ V+ + A +
Sbjct: 359 MIAGYGMHGHAAKALEL---FPAMIDSGVRPNYITFVSVLAACS 399
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 82/134 (61%), Gaps = 4/134 (2%)
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
+V SW ++I+ A++G S +AL F+ MR+ + + + A+ AC+ + D+ GK H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
++ F G + + +++ALI MY++CG++E+A VF ++ +R+ VSWTSMI G+
Sbjct: 100 ---QQAFVFGYQSDIF-VSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLN 155
Query: 337 GYAQEALLTFLGVL 350
G A +A+ F +L
Sbjct: 156 GNALDAVSLFKDLL 169
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 166/509 (32%), Positives = 256/509 (50%), Gaps = 53/509 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH + G +I + L+ Y+ G + +A FE+ +WN M+ G+A+
Sbjct: 157 KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIG 216
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E + +++M D+ P +T + +LSV A G G +HG + GY S V +
Sbjct: 217 QFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSN 276
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
+L+++Y G+C I+ A +IF+ M ++
Sbjct: 277 SLIDMY----GKCKC------------------------------IEDALEIFEMMREKD 302
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+ SW +++S Q G L L + M A + D V + L AC+ + L G+ IH
Sbjct: 303 IFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHG 362
Query: 278 Y--VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
Y V G++ V L NA+I MYA CG + +A+ VF +M ++ SW MI G+
Sbjct: 363 YMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGM 422
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
GY EAL +TF+GVLSACSH GFV +GR F M + + P IE
Sbjct: 423 HGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIE 482
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HY C++D+ RAG +DEA+ L MP++ N V +LL CR+H +A LA AQ+ V E
Sbjct: 483 HYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQR-VFE 541
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
++PE Y+ L++NVY A R+++V VR M + VRK PG SW+++ +H FV+ D
Sbjct: 542 LEPEHCGSYV-LMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSAD 600
Query: 501 STYKQASLIYKTLGEITMQAMQEGYKPDI 529
+ +A IY L +T + + GY PD+
Sbjct: 601 RAHPEAHSIYAGLNSLTARLREHGYVPDV 629
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/464 (23%), Positives = 198/464 (42%), Gaps = 77/464 (16%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVF-EKTENPSTAIWNQMIRGHARS 96
+IHS ++INGF + L+ Y + A +F + T + +N +I G +
Sbjct: 58 EIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITN 117
Query: 97 ETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
PE+ Y++M ++ PD++T+ + C E +++HG + G +VFI
Sbjct: 118 GFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDV---LEIKKIHGLLFKFGLELDVFIG 174
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
+ L+N YL G + A++ F+++P R VV WN+++ GY
Sbjct: 175 SALVNCYLKFG---LMEHAQVAFEELPIRDVVLWNAMVNGY------------------- 212
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
AQ G+ L F M V + + LS A +GDL G+ IH
Sbjct: 213 ------------AQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIH 260
Query: 277 SY-VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
+ ++ + G V+++N+LI MY C IE+A +F M+ ++ SW S+++ +
Sbjct: 261 GFAMKMGYDSG-----VAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQ 315
Query: 336 QGY---------------AQEALLTFLGVLSACSHGGFVDEGRQFFECM-----NQNWGI 375
G Q L+T VL ACSH + GR+ M ++
Sbjct: 316 CGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKD 375
Query: 376 KPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQ 435
+ ++D++++ G M +A + + M K + A +++G +H A ++
Sbjct: 376 IDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNK-DVASWNIMIMGYGMHGYGNEALEMFS 434
Query: 436 KLV-AEIDPEQA-----------AGYLALVANVYAAAKRWQDVA 467
++ ++ P++ AG+++ N K DVA
Sbjct: 435 RMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVA 478
>gi|356522492|ref|XP_003529880.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g08510-like [Glycine max]
Length = 474
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 256/458 (55%), Gaps = 27/458 (5%)
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVY-LYKQMIDKETEPDEYTYSFLLSVCARCG 132
V + P+ ++N++I+ ++ + + LY Q+ P+++T++FL S C
Sbjct: 2 VLHHSSKPTLFLYNKLIQAYSSHPQHQHRCFSLYSQIRLHGFLPNQHTFNFLFSACTSLS 61
Query: 133 LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNS 192
G+ +H + SG+ ++F T L+++Y G + AR LFD+MP R V WN+
Sbjct: 62 SSSLGQMLHTHFIKSGFEPDLFAATALLDMYAKVGA---LELARKLFDEMPVRGVPRWNA 118
Query: 193 LLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR-VGL 251
++ G + GD+DGA ++F MP RNVV WTTMISG + N + +AL LF M + + +
Sbjct: 119 MMAGLARFGDMDGALELFXSMPSRNVVPWTTMISGYSWNKQYDKALGLFLGMEQEKGIMP 178
Query: 252 DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEA 311
+ V LV+ L ACA + L++G+ + +Y +N +NA++ MY CG+I+ A
Sbjct: 179 NAVTLVSILPACANLXALEIGQRVEAYARKNGFFKNXYA----SNAVLEMYVKCGKIDAA 234
Query: 312 YGVFRKM-QRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSH 355
+ VF ++ RN SW SM+ G A G +AL +TF+G+L AC+
Sbjct: 235 WRVFNEIGSLRNLCSWNSMVVGLAVHGECCKALELYDQMLGEGTSPDDVTFVGLLLACTQ 294
Query: 356 GGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLG 415
GG V +GR F+ ++ I P++EHYGCMVDL RAG + EA+ ++Q+M MKP+ + G
Sbjct: 295 GGMVKKGRHIFKSKTTSFYIIPKLEHYGCMVDLLGRAGQLREAYEVIQSMSMKPDSVIWG 354
Query: 416 SLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIK 475
+LL C H N ELA A+ L ++P Y+ +++N+YA+A +W VA +R+ M
Sbjct: 355 ALLGACSFHGNVELAEIAAESLFV-LEPWNPGNYV-ILSNIYASAGQWDGVAKLRKVMKG 412
Query: 476 MGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTL 513
+ K G S+++ LH F+ D ++ +++ I+ L
Sbjct: 413 SKITKSAGHSFIEEGAQLHKFIVKDRSHPKSNEIFALL 450
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 140/309 (45%), Gaps = 13/309 (4%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H+ I +GF + LL Y G L A K+F++ WN M+ G AR
Sbjct: 69 LHTHFIKSGFEPDLFAATALLDMYAKVGALELARKLFDEMPVRGVPRWNAMMAGLARFGD 128
Query: 99 PEKSVYLYKQMIDKETEPDEYT---YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFI 155
+ ++ L+ M + P YS+ GLF EQ G + + V I
Sbjct: 129 MDGALELFXSMPSRNVVPWTTMISGYSWNKQYDKALGLFLGMEQEKG--IMPNAVTLVSI 186
Query: 156 RTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
NL + G+ AR + ++ + N++L+ YVK G ID AW++F+E+
Sbjct: 187 LPACANLXALEIGQRVEAYAR---KNGFFKNXYASNAVLEMYVKCGKIDAAWRVFNEIGS 243
Query: 216 -RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKW 274
RN+ SW +M+ G A +G+ +AL L+++M D V V L AC + G +K G+
Sbjct: 244 LRNLCSWNSMVVGLAVHGECCKALELYDQMLGEGTSPDDVTFVGLLLACTQGGMVKKGRH 303
Query: 275 IHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR-NTVSWTSMITGF 333
I +F + P L ++ + G++ EAY V + M + ++V W +++
Sbjct: 304 IFKSKTTSFYI--IPKLEHY-GCMVDLLGRAGQLREAYEVIQSMSMKPDSVIWGALLGAC 360
Query: 334 AKQGYAQEA 342
+ G + A
Sbjct: 361 SFHGNVELA 369
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 169/544 (31%), Positives = 274/544 (50%), Gaps = 59/544 (10%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLF---QIHSQIIINGFSQKNYILAKLLAFYVTSGYLI 69
T A T R S++ +K L IHS + + + ++L L+ Y G +
Sbjct: 55 TGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVS 114
Query: 70 NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
+A VF+ W +I G+A+++ P +++ L M+ P +T++ L
Sbjct: 115 DARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAG 174
Query: 130 RCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVS 189
CG GEQ+H + +V++ + L+++Y C ++
Sbjct: 175 ACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMY--------ARCQQM------------ 214
Query: 190 WNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARV 249
D A ++FD + +N VSW +I+G A+ G L F EM+R
Sbjct: 215 --------------DMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGF 260
Query: 250 GLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIE 309
G + SA A IG L+ G+W+H+++ ++ + + + N ++ MYA G +
Sbjct: 261 GATHFTYSSVFSALARIGALEQGRWVHAHMIKS----GQKLTAFVANTILGMYAKSGSMV 316
Query: 310 EAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACS 354
+A VF ++ +R+ V+W +M+T FA+ G +EA+ +TFL VL+ACS
Sbjct: 317 DARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACS 376
Query: 355 HGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL 414
HGG V EG+Q+F+ M +++ ++P I+HY VDL RAGL+ EA V MPM+P AV
Sbjct: 377 HGGLVKEGKQYFDMM-KDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVW 435
Query: 415 GSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMI 474
G+LL CR+H NA++ Q A V E+DPE G L+ N+YA+ +W D A VR+ M
Sbjct: 436 GALLGACRMHKNAKIG-QYAADHVFELDPEDT-GPPVLLYNIYASTGQWDDAARVRKMMK 493
Query: 475 KMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFL 534
GV+K P SWV+I +H FVA DST+ ++ IY+ E+ + + GY P+ + L
Sbjct: 494 ATGVKKEPACSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNTRIKKAGYVPNTDYVLL 553
Query: 535 GIEE 538
I+E
Sbjct: 554 HIKE 557
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 114/271 (42%), Gaps = 55/271 (20%)
Query: 109 MIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGG 168
++ E P Y +++ CA+ +H + S + F+ +L+++Y G
Sbjct: 53 LLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCG- 111
Query: 169 ECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGC 228
V AR +FD +P R VVSW L+ GY
Sbjct: 112 --AVSDARHVFDGIPTRDVVSWTYLITGY------------------------------- 138
Query: 229 AQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY-VEENFSVGR 287
AQN +AL L +M RAR + L A G +G+ +H+ V+ N
Sbjct: 139 AQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLD--- 195
Query: 288 EPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALL--- 344
E V V +AL+ MYA C +++ A VF + +N VSW ++I GFA++G + L+
Sbjct: 196 EDVYV--GSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFA 253
Query: 345 ------------TFLGVLSACSHGGFVDEGR 363
T+ V SA + G +++GR
Sbjct: 254 EMQRNGFGATHFTYSSVFSALARIGALEQGR 284
>gi|147800371|emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
Length = 773
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 166/502 (33%), Positives = 258/502 (51%), Gaps = 59/502 (11%)
Query: 56 AKLLAFYVTSGYLINAHKVFE---KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDK 112
KL+ + G + A +VFE + + ++W M G++R+ P++++ LY +M+ +
Sbjct: 112 GKLITLFSVCGRVDEARRVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEALLLYYEMVCQ 171
Query: 113 ETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV 172
+ + +S L C+ G R G VH +VL + + +
Sbjct: 172 FGQLGNFAFSMALKACSDLGDLRTGRAVHAQVLKATEDPDQVVN---------------- 215
Query: 173 GCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNG 232
N+LL+ Y + G + A ++FD MPHRN+VSW ++I+G +
Sbjct: 216 ------------------NALLRLYSEDGCFEEALRMFDGMPHRNLVSWNSLIAGLVKKE 257
Query: 233 KSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLV 292
+A+ F M+ +G V L L CA + L GK IH+ + ++ + PVL
Sbjct: 258 GVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVL- 316
Query: 293 SLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------- 343
N+L+ MYA CG ++ VF MQ ++ SW ++ITG+A G EA+
Sbjct: 317 ---NSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICS 373
Query: 344 ------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDE 397
+TF+ +LS CSH G D+G + FE M + GI P +EHY C+VD+ RAG + E
Sbjct: 374 GFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDHGISPTVEHYACLVDVLGRAGRIKE 433
Query: 398 AFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVY 457
A +V+NMP KP ++ GSLL CR+H N LA VA++L E++P A Y+ L +N+Y
Sbjct: 434 ALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLF-ELEPNNAGNYVML-SNIY 491
Query: 458 AAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEIT 517
A A W+ V VR+ M K G+ K G SW+QI +H FVAG S + S+ YK + +
Sbjct: 492 ANAGMWESVKVVREFMEKRGMTKEAGCSWLQIKSKIHTFVAGGSNEFRNSVEYKKVWKRL 551
Query: 518 MQAMQE-GYKPDISELFLGIEE 538
M+AM+E GY PD + + E
Sbjct: 552 MEAMEEVGYVPDTGVVLHDVSE 573
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH+ I+ + +L L+ Y G + +VF + WN +I G+A +
Sbjct: 299 EIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAING 358
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+++ +++MI PD T+ LLS C+ GL +G
Sbjct: 359 RMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDG 398
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 19/134 (14%)
Query: 293 SLNNALIHMYASCGEIEEAYGVFRKMQRRNTVS---WTSMITGFAKQGYAQEALLTF--- 346
+L LI +++ CG ++EA VF + W +M G+++ GY +EALL +
Sbjct: 109 TLKGKLITLFSVCGRVDEARRVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEALLLYYEM 168
Query: 347 ------LG------VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGL 394
LG L ACS G + GR + + ++ + ++ L+S G
Sbjct: 169 VCQFGQLGNFAFSMALKACSDLGDLRTGRAVHAQVLKATEDPDQVVNNA-LLRLYSEDGC 227
Query: 395 MDEAFSLVQNMPMK 408
+EA + MP +
Sbjct: 228 FEEALRMFDGMPHR 241
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 160/516 (31%), Positives = 268/516 (51%), Gaps = 56/516 (10%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH+ + + F+ ++ L+ Y +++A VF++ W +I G+A+++
Sbjct: 72 KIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRKDMVSWTSLIAGYAQND 131
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
P +++ L M+ +P+ +T++ LL G Q+H + G+ +V++ +
Sbjct: 132 MPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGS 191
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y CG +D A +FD++ +N
Sbjct: 192 ALLDMY----ARCG------------------------------KMDMATAVFDKLDSKN 217
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VSW +ISG A+ G AL F EM R + S+ A +G L+ GKW+H+
Sbjct: 218 GVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHA 277
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
+V ++ R+ + + N L+ MYA G + +A VF ++ ++ V+W SM+T FA+ G
Sbjct: 278 HVIKS----RQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYG 333
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+EA+ +TFL +L+ACSHGG V EG+++FE M + + ++P I+HY
Sbjct: 334 LGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKE-YDLEPEIDHY 392
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
+V L RAGL++ A + MPM+P AV G+LL CR+H NA++ Q A V E+D
Sbjct: 393 VTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVG-QFAADHVFELD 451
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
P+ + G L+ N+YA+ +W A VR M GV+K P SWV++ +H FVA D T
Sbjct: 452 PDDS-GPPVLLYNIYASTGQWDAAARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDT 510
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ QA IYK GEI+ + +EGY PD+ + L +++
Sbjct: 511 HPQAEEIYKMWGEISKKIRKEGYVPDMDYVLLHVDD 546
>gi|218188961|gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indica Group]
Length = 706
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 168/482 (34%), Positives = 259/482 (53%), Gaps = 36/482 (7%)
Query: 81 PSTAI-WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE- 138
P+T + N ++R AR P + ++ D PD Y+++FL+
Sbjct: 159 PATLLAHNSLLRALARGRRPHLAFGAFR---DLPLVPDNYSFTFLVRAATALAAAAASAL 215
Query: 139 -------QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWN 191
VH L G+ + +++ +++Y +G VG AR F ++ + VV
Sbjct: 216 DAALIAGSVHASALRHGHAGDPHVQSGAVSMYAAAGD---VGAARAAFAEIASPDVVCVT 272
Query: 192 SLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGL 251
+++ G+ D A ++FD MP R+ V+W MI+G G+SR+AL LF+EMR A +
Sbjct: 273 AMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAV 332
Query: 252 DQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEA 311
+V LV+AL+ACA++G L+ GKW+HS S G + V+L ALI MY+ CG + A
Sbjct: 333 GEVTLVSALTACAQLGALERGKWVHSCAH---SRGMR-LSVTLGTALIDMYSKCGAVAAA 388
Query: 312 YGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHG 356
VF M RN +WTS ++G A G ++ L +TF+ VL CS
Sbjct: 389 MEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMA 448
Query: 357 GFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGS 416
G VDEGR F+ M N GI P +EHYGCMVDL+ RAG +D+A + + MP++P++ V G+
Sbjct: 449 GLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGA 508
Query: 417 LLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKM 476
LL RIH N EL KL+A I+ + A ++ L++N+YA ++ W+ V+ VR M
Sbjct: 509 LLNASRIHKNVELGKYAMDKLMA-IESKNDAAHV-LLSNIYADSQNWKGVSNVRNMMKAK 566
Query: 477 GVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGI 536
GV+K PG S +++ G +H+F G T+ + I L E+ + +GY + E+ I
Sbjct: 567 GVKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDI 626
Query: 537 EE 538
EE
Sbjct: 627 EE 628
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 159/507 (31%), Positives = 261/507 (51%), Gaps = 59/507 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H I+ N ++++ L+ Y + A V++ ++ I + MI G+ +
Sbjct: 369 ELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNG 428
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++V +++ ++++ P+ + +L CA + G+++H L + Y ++ +
Sbjct: 429 MSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVES 488
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
LM++Y K G +D + IF ++ ++
Sbjct: 489 ALMDMY----------------------------------AKCGRLDLSHYIFSKISAKD 514
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
V+W +MIS AQNG+ +AL+LF EM V V + + LSACA + + GK IH
Sbjct: 515 EVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHG 574
Query: 278 YVEENFSVGREPVLVSL--NNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAK 335
V + P+ L +ALI MY CG +E A+ VF M +N VSW S+I +
Sbjct: 575 VVIKG------PIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGA 628
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
G +E++ +TFL ++SAC+H G V EG + F CM + + I PR+E
Sbjct: 629 YGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRME 688
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
H+ CMVDL+SRAG +D+A L+ +MP KP+ + G+LL CR+H N ELA +Q+L +
Sbjct: 689 HFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELF-K 747
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGD 500
+DP +GY L++N+ A A RW V+ VR+ M V+K PG SWV +N H FVA D
Sbjct: 748 LDPHN-SGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAAD 806
Query: 501 STYKQASLIYKTLGEITMQAMQEGYKP 527
++ + IY +L I ++ +EGY P
Sbjct: 807 KSHPDSEDIYMSLKSILLELREEGYIP 833
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 182/402 (45%), Gaps = 59/402 (14%)
Query: 26 LLQIRNTTKTLF---QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPS 82
L + T LF Q+H+ + G + + L++ Y L + K+F
Sbjct: 253 FLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDD 312
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHG 142
WN MI G ++ ++++ L+ M PD T LL F +G+++HG
Sbjct: 313 LVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHG 372
Query: 143 RVLASGYCSNVFIRTNLMNLYLMSGGEC-GVGCARLLFDDMPARSVVSWNSLLKGYVKRG 201
++ + +VF+ + L+++Y +C V A+ ++D A VV ++++ GYV
Sbjct: 373 YIVRNCVHMDVFLVSALVDIYF----KCRAVRMAQSVYDSSKAIDVVIGSTMISGYV--- 425
Query: 202 DIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALS 261
NG S++A+ +F + + + VA+ + L
Sbjct: 426 ----------------------------LNGMSQEAVKMFRYLLEQGIRPNAVAIASVLP 457
Query: 262 ACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR 321
ACA + +KLG+ +HSY +N GR + +AL+ MYA CG ++ ++ +F K+ +
Sbjct: 458 ACASMAAMKLGQELHSYALKNAYEGR----CYVESALMDMYAKCGRLDLSHYIFSKISAK 513
Query: 322 NTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFF 366
+ V+W SMI+ FA+ G +EAL +T VLSAC+ + G++
Sbjct: 514 DEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIH 573
Query: 367 ECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
+ + I+ + ++D++ + G ++ A + ++MP K
Sbjct: 574 GVVIKG-PIRADLFAESALIDMYGKCGNLEWAHRVFESMPEK 614
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 161/373 (43%), Gaps = 54/373 (14%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H G ++ + L+ Y G L +A +VF+ +WN M+ G+ ++ +
Sbjct: 168 VHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGS 227
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
+V L+ M EP+ T + LSV S S++F
Sbjct: 228 VSSAVELFGDMRASGCEPNFATLACFLSV-------------------SATESDLFFGVQ 268
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
L L + G E V A N+L+ Y K +D WK+F MP ++
Sbjct: 269 LHTLAVKYGLESEVAVA---------------NTLVSMYAKCKCLDDGWKLFGLMPRDDL 313
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSY 278
V+W MISGC QNG QAL LF +M+++ + D V LV+ L A ++ GK +H Y
Sbjct: 314 VTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGY 373
Query: 279 VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY 338
+ N V + LVS AL+ +Y C + A V+ + + V ++MI+G+ G
Sbjct: 374 IVRN-CVHMDVFLVS---ALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGM 429
Query: 339 AQEALLTF---------------LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYG 383
+QEA+ F VL AC+ + G++ +N + R
Sbjct: 430 SQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKN-AYEGRCYVES 488
Query: 384 CMVDLFSRAGLMD 396
++D++++ G +D
Sbjct: 489 ALMDMYAKCGRLD 501
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 136/316 (43%), Gaps = 44/316 (13%)
Query: 37 FQIHSQIIINGFSQKNYIL-AKLLAFYVTSGYLINAHKVFEKTENPSTAI---WNQMIRG 92
Q+H + + G + L +L+ YV + +A VF + A WN +IRG
Sbjct: 59 LQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRGAAACALPWNWLIRG 118
Query: 93 HARSETPEKSVYLYKQMIDKETEP--DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYC 150
+ ++ Y +M + P D +T+ +++ CA G G VH G
Sbjct: 119 LTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLD 178
Query: 151 SNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIF 210
++F+ + L+ +Y G + AR +FD M R V WN ++ GYVK G + A ++F
Sbjct: 179 GDMFVGSALIKMYANGG---LLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELF 235
Query: 211 DEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLK 270
+M SGC N + L LS A DL
Sbjct: 236 GDM----------RASGCEPNFAT---------------------LACFLSVSATESDLF 264
Query: 271 LGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMI 330
G +H+ + + + E V++ N L+ MYA C +++ + +F M R + V+W MI
Sbjct: 265 FGVQLHT-LAVKYGLESE---VAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMI 320
Query: 331 TGFAKQGYAQEALLTF 346
+G + G+ +ALL F
Sbjct: 321 SGCVQNGFVDQALLLF 336
>gi|225453406|ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
[Vitis vinifera]
gi|297734603|emb|CBI16654.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 166/495 (33%), Positives = 261/495 (52%), Gaps = 65/495 (13%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IHS ++ GF Y L+ Y G + A K+F++ + S W +I G+ RS
Sbjct: 109 EIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVRSG 168
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+ + L+ QMI+K+ S F
Sbjct: 169 DMDNAGKLFDQMIEKD-------------------------------------SAAF--N 189
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
+++ Y+ G C AR LFD+MP RSVVSW ++ GY G++D A +FD MP +N
Sbjct: 190 TMIDAYVKLGDMCS---ARKLFDEMPERSVVSWTIMIYGYSSNGNLDSARSLFDAMPEKN 246
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRR-ARVGLDQVALVAALSACAEIGDLKLGKWIH 276
+ SW MISG QN + +AL LF+EM+ + D+V +V+ L A A++G L LG W+H
Sbjct: 247 LFSWNAMISGYRQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDLGGWVH 306
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+V + ++ ALI MYA CGEI ++ GVF M + T SW ++I FA
Sbjct: 307 RFVRRK----KLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAIN 362
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G A+EAL +T +GVLSAC+H G V+EG+++F+ M + +G+ P+IEH
Sbjct: 363 GRAKEALGLFMEMNHKGFMPNEITMIGVLSACNHSGLVEEGKRWFKAM-EEFGLTPKIEH 421
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YGCMVDL RAG + EA L+++MP + N +L S L C + A +V ++ + ++
Sbjct: 422 YGCMVDLLGRAGCLQEAEKLMESMPYEANGIILSSFLFACGYSKDVARAERVLKEAI-KM 480
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+ Y+ ++ N+YA KRW++ V+ M + GV+K G S ++++ + +FVAGD
Sbjct: 481 EAWNDGNYI-MLRNLYANEKRWKEADEVKGLMRRNGVKKEAGCSAIEVDSRVWEFVAGDR 539
Query: 502 TYKQASLIYKTLGEI 516
+ + I+ LG++
Sbjct: 540 VHPKWEAIHSVLGQL 554
>gi|125539857|gb|EAY86252.1| hypothetical protein OsI_07623 [Oryza sativa Indica Group]
Length = 629
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 149/410 (36%), Positives = 241/410 (58%), Gaps = 29/410 (7%)
Query: 148 GYCSNVFIRTNLMNLYLMSGGECGVG----CARLLFDDMPARSVVSWNSLLKGYVKRGDI 203
G ++ + +L+ LY C +G R+L+ A VVSWN+++ GY K GD+
Sbjct: 108 GALAHPVVTNSLLKLY------CSLGLIDRARRVLYSGGAALDVVSWNTMVSGYGKGGDL 161
Query: 204 DGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSAC 263
A ++F MP RN+VSW+ M+ C + G+ +AL +F+ M R D V LV+ L AC
Sbjct: 162 GAAREVFARMPERNLVSWSAMVDACVRAGEFGEALWVFDRMMREEFRPDVVVLVSVLKAC 221
Query: 264 AEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNT 323
A +G ++ G+W+H Y+E GR L+ L AL+ MY CG +E+A+ VF + RR+
Sbjct: 222 AHLGAVERGRWVHRYLETGSFGGRRGNLM-LETALVDMYCKCGCMEDAWQVFDGVHRRDV 280
Query: 324 VSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFEC 368
V W +MI G A GY + AL TF+ VL AC+H G VDEG++ F+
Sbjct: 281 VLWNAMIGGLAMNGYGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKS 340
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAE 428
M Q++GIKP+ EHYGC+ DL RAG ++EA +L+ +MPM+P+ + G+L+ C++HN+
Sbjct: 341 M-QDYGIKPQREHYGCLADLLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDIN 399
Query: 429 LASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
+ +V ++L+ E++P Y+ L N+YA RW++ +RQ M G +K G S+++
Sbjct: 400 VGERVGKRLI-ELEPYDGGRYVVLF-NLYAVNGRWEEARTIRQMMEDRGAKKETGLSFIE 457
Query: 489 INGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+NG++H+F++GD+ + IY L +I + GY D S++ + +++
Sbjct: 458 LNGLVHEFISGDTRHPLTRKIYALLEDIERRLQLIGYVKDTSQVIMDMDD 507
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 112/282 (39%), Gaps = 50/282 (17%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
+++ Y G L A +VF + + W+ M+ R+ ++++++ +M+ +E PD
Sbjct: 151 MVSGYGKGGDLGAAREVFARMPERNLVSWSAMVDACVRAGEFGEALWVFDRMMREEFRPD 210
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYC----SNVFIRTNLMNLYLMSGGECGVG 173
+L CA G G VH R L +G N+ + T L+++Y C G
Sbjct: 211 VVVLVSVLKACAHLGAVERGRWVH-RYLETGSFGGRRGNLMLETALVDMY------CKCG 263
Query: 174 C---ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQ 230
C A +FD + R VV WN+ MI G A
Sbjct: 264 CMEDAWQVFDGVHRRDVVLWNA-------------------------------MIGGLAM 292
Query: 231 NGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPV 290
NG +AL LF M + ++ +A L AC G + GK + +++ G +P
Sbjct: 293 NGYGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSMQD---YGIKPQ 349
Query: 291 LVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVS-WTSMIT 331
L + G +EEA + M S W ++++
Sbjct: 350 REHY-GCLADLLGRAGNVEEAEALLLDMPMEPHASQWGALMS 390
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 4/148 (2%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
L+ Y G + +A +VF+ +WN MI G A + E+++ L+++M+ K P+
Sbjct: 255 LVDMYCKCGCMEDAWQVFDGVHRRDVVLWNAMIGGLAMNGYGERALELFRRMLQKGFMPN 314
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
E T+ +L C G EG++V + G R + L + G V A
Sbjct: 315 ESTFIAVLCACTHTGRVDEGKRVFKSMQDYGIKPQ---REHYGCLADLLGRAGNVEEAEA 371
Query: 178 LFDDMPARSVVS-WNSLLKGYVKRGDID 204
L DMP S W +L+ DI+
Sbjct: 372 LLLDMPMEPHASQWGALMSSCQMHNDIN 399
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 166/551 (30%), Positives = 286/551 (51%), Gaps = 67/551 (12%)
Query: 14 SSKALTTRQIFSLLQI----RNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLI 69
S ++ T+Q LL + RN+ +H ++ GF Q ++ KL+ + +
Sbjct: 62 SHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVD 121
Query: 70 NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVC- 128
NA KVF+KT + +WN + R A + + LY +M D +TY++LL C
Sbjct: 122 NARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACV 181
Query: 129 -ARC--GLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPAR 185
+ C ++G+++H +L GY ++V + T LM++Y G C V A +FD+MP +
Sbjct: 182 ASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFG--C-VSYASAVFDEMPVK 238
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEM---PHRNVVSWTTMISGCAQNGKSRQALSLFN 242
+VVSW++++ Y K G A ++F EM H +V + TM+S
Sbjct: 239 NVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVS---------------- 282
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMY 302
L ACA L+ GK IH+Y+ G + +L + +ALI MY
Sbjct: 283 ----------------VLQACAAFAALEQGKLIHAYI---LRRGLDSILPVI-SALITMY 322
Query: 303 ASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFL 347
A CG++E +F +M +++ V W S+I+ + GY ++A+ ++F+
Sbjct: 323 ARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFI 382
Query: 348 GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM 407
VL ACSH G V+EG++ FE M + GI+P +EHY CMVDL RA +DEA +++++ +
Sbjct: 383 SVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRI 442
Query: 408 KPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVA 467
+P V GSLL CRIH + ELA + +++L +++P A Y+ L+A++YA A+ W +V
Sbjct: 443 EPGPKVWGSLLGACRIHCHVELAERASKRLF-KLEPTNAGNYV-LLADIYAEAEMWDEVK 500
Query: 468 AVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKP 527
V++ + ++K PG+SW+++ ++ F + D Q ++ L ++ + Q GY P
Sbjct: 501 RVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTP 560
Query: 528 DISELFLGIEE 538
+ +++
Sbjct: 561 QTKLVLYDLDQ 571
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 156/384 (40%), Gaps = 70/384 (18%)
Query: 80 NPST---AIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
NPST + N +I+ + ++++YL + E+ P + T L+ AR +
Sbjct: 32 NPSTPPNSNNNHLIQSLCKQGNLKQALYL----LSHESNPTQQTCELLILSAARRNSLSD 87
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKG 196
VH ++ G+ + F+ T L+N++ V AR +FD R++ WN+L +
Sbjct: 88 ALDVHQLLVDGGFDQDPFLATKLINMF---SELDTVDNARKVFDKTRKRTIYVWNALFRA 144
Query: 197 YVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVAL 256
A G+ L L+ M V D+
Sbjct: 145 L-------------------------------ALAGRGNDVLELYPRMNMMGVSSDRFTY 173
Query: 257 VAALSACAE----IGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAY 312
L AC + L+ GK IH+++ + V+ + L+ MYA G + A
Sbjct: 174 TYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTT----LMDMYARFGCVSYAS 229
Query: 313 GVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-----------------LTFLGVLSACSH 355
VF +M +N VSW++MI +AK G EAL +T + VL AC+
Sbjct: 230 AVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAA 289
Query: 356 GGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL- 414
+++G+ + + G+ + ++ +++R G ++ + M K D VL
Sbjct: 290 FAALEQGKLIHAYILRR-GLDSILPVISALITMYARCGKLESGQLIFDRMHKK--DVVLW 346
Query: 415 GSLLLGCRIHNNAELASQVAQKLV 438
SL+ +H A ++ ++++
Sbjct: 347 NSLISSYGLHGYGRKAIKIFEEMI 370
>gi|115446651|ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|46389885|dbj|BAD15486.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536636|dbj|BAF09019.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|125582482|gb|EAZ23413.1| hypothetical protein OsJ_07107 [Oryza sativa Japonica Group]
gi|215712305|dbj|BAG94432.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 586
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 149/410 (36%), Positives = 241/410 (58%), Gaps = 29/410 (7%)
Query: 148 GYCSNVFIRTNLMNLYLMSGGECGVG----CARLLFDDMPARSVVSWNSLLKGYVKRGDI 203
G ++ + +L+ LY C +G R+L+ A VVSWN+++ GY K GD+
Sbjct: 108 GALAHPVVTNSLLKLY------CSLGLLDRARRVLYSGGAALDVVSWNTMVSGYGKGGDL 161
Query: 204 DGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSAC 263
A ++F MP RN+VSW+ M+ C + G+ +AL +F+ M R D V LV+ L AC
Sbjct: 162 GAAREVFARMPERNLVSWSAMVDACVRAGEFGEALWVFDRMMREEFRPDVVVLVSVLKAC 221
Query: 264 AEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNT 323
A +G ++ G+W+H Y+E GR L+ L AL+ MY CG +E+A+ VF + RR+
Sbjct: 222 AHLGAVERGRWVHRYLETGSFGGRRGNLM-LETALVDMYCKCGCMEDAWQVFDGVHRRDV 280
Query: 324 VSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFEC 368
V W +MI G A GY + AL TF+ VL AC+H G VDEG++ F+
Sbjct: 281 VLWNAMIGGLAMNGYGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKS 340
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAE 428
M Q++GIKP+ EHYGC+ DL RAG ++EA +L+ +MPM+P+ + G+L+ C++HN+
Sbjct: 341 M-QDYGIKPQREHYGCLADLLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDIN 399
Query: 429 LASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
+ +V ++L+ E++P Y+ L N+YA RW++ +RQ M G +K G S+++
Sbjct: 400 VGERVGKRLI-ELEPYDGGRYVVLF-NLYAVNGRWEEARTIRQMMEDRGAKKETGLSFIE 457
Query: 489 INGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+NG++H+F++GD+ + IY L +I + GY D S++ + +++
Sbjct: 458 LNGLVHEFISGDTRHPLTRKIYALLEDIERRLQLIGYVKDTSQVIMDMDD 507
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 111/283 (39%), Gaps = 52/283 (18%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
+++ Y G L A +VF + + W+ M+ R+ ++++++ +M+ +E PD
Sbjct: 151 MVSGYGKGGDLGAAREVFARMPERNLVSWSAMVDACVRAGEFGEALWVFDRMMREEFRPD 210
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYC----SNVFIRTNLMNLYLMSGGECGVG 173
+L CA G G VH R L +G N+ + T L+++Y C G
Sbjct: 211 VVVLVSVLKACAHLGAVERGRWVH-RYLETGSFGGRRGNLMLETALVDMY------CKCG 263
Query: 174 C---ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQ 230
C A +FD + R VV WN+ MI G A
Sbjct: 264 CMEDAWQVFDGVHRRDVVLWNA-------------------------------MIGGLAM 292
Query: 231 NGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE-NFSVGREP 289
NG +AL LF M + ++ +A L AC G + GK + +++ RE
Sbjct: 293 NGYGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSMQDYGIKPQREH 352
Query: 290 VLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVS-WTSMIT 331
L + G +EEA + M S W ++++
Sbjct: 353 Y-----GCLADLLGRAGNVEEAEALLLDMPMEPHASQWGALMS 390
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 5/160 (3%)
Query: 47 GFSQKNYIL-AKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYL 105
G + N +L L+ Y G + +A +VF+ +WN MI G A + E+++ L
Sbjct: 243 GGRRGNLMLETALVDMYCKCGCMEDAWQVFDGVHRRDVVLWNAMIGGLAMNGYGERALEL 302
Query: 106 YKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLM 165
+++M+ K P+E T+ +L C G EG++V + G R + L +
Sbjct: 303 FRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSMQDYGIKPQ---REHYGCLADL 359
Query: 166 SGGECGVGCARLLFDDMPARSVVS-WNSLLKGYVKRGDID 204
G V A L DMP S W +L+ DI+
Sbjct: 360 LGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDIN 399
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 163/520 (31%), Positives = 271/520 (52%), Gaps = 30/520 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH I GF++ + L+ + ++ A VF+ W M +
Sbjct: 98 KIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVVSWTSMTYCYVNCG 157
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+ + L+++M + T S +L CA + G +VHG +L + NV++ +
Sbjct: 158 MCRQGILLFREMGLNGIRANSLTVSSILPACA--DYIKLGREVHGFILRNEMEGNVYVSS 215
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR- 216
L+N+Y S G+ ARL+FD M R +VSWN +L Y + + +F +M
Sbjct: 216 ALVNMYASS---LGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEG 272
Query: 217 ---NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK 273
N SW ISGC QNG+ AL + +M+ + + +++ +V+AL C + L+ GK
Sbjct: 273 IKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGK 332
Query: 274 WIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF 333
IH YV ++ + V++ AL+ +YA CG++E + VF M R++ V+W +MI
Sbjct: 333 EIHGYVFRHWFIED----VTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMAN 388
Query: 334 AKQGYAQEALL---------------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
+ G E+L+ TF+GVLS CSH DEG F M+ I P
Sbjct: 389 SMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITPD 448
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLV 438
+HY CMVD+ SRAG ++EA+ ++ MP++P A G+LL CR++ N EL + A +L
Sbjct: 449 ADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGACRVYKNVELGTLAASQLF 508
Query: 439 AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVA 498
EI+P+ A Y+ L++N+ AK+W + + +R+ M G+ K PG+SWVQ+ ++ FV
Sbjct: 509 -EIEPDNAGNYV-LLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRSWVQVKNKVYSFVT 566
Query: 499 GDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
GD + +Q +IY+ L EI + +GY+P+ + +++
Sbjct: 567 GDKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDFVLQNVDQ 606
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 130/278 (46%), Gaps = 42/278 (15%)
Query: 57 KLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEP 116
KL+ + SG L A +F+K P W +I GH + P+K++ +Y ++ + P
Sbjct: 16 KLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRP 75
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCA 175
D++ + CA G +++H + G+ ++ + L++++ G+C V A
Sbjct: 76 DKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMF----GKCKFVNGA 131
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
R +FDDM + VVSW S+ YV C G R
Sbjct: 132 RCVFDDMVVKDVVSWTSMTYCYVN----------------------------C---GMCR 160
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
Q + LF EM + + + + + L ACA+ +KLG+ +H ++ N G V ++
Sbjct: 161 QGILLFREMGLNGIRANSLTVSSILPACADY--IKLGREVHGFILRNEMEGN----VYVS 214
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF 333
+AL++MYAS +++A VF M R+ VSW M+T +
Sbjct: 215 SALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAY 252
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 8/164 (4%)
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
P +S+ L+K + GD+ A +FD++P ++ +WT +ISG Q+G ++A+ +++
Sbjct: 11 PCQSI----KLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYS 66
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMY 302
+ V D+ L++ ACA GDL + K IH ++ G LV L NALI M+
Sbjct: 67 TLLSRNVRPDKFVLLSVAKACAASGDLVVAKKIH---DDAIQFGFNKDLV-LGNALIDMF 122
Query: 303 ASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
C + A VF M ++ VSWTSM + G ++ +L F
Sbjct: 123 GKCKFVNGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLF 166
>gi|449452160|ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Cucumis sativus]
Length = 532
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 170/540 (31%), Positives = 280/540 (51%), Gaps = 35/540 (6%)
Query: 19 TTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFE 76
++++ LL L Q H+Q++ +G N++L++LL F S G L +A K+F+
Sbjct: 4 SSKRCLLLLHKCINMNQLKQAHAQVLKSGLHNSNFVLSRLLNFCAESRNGSLSHAFKLFQ 63
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
++P+ I+N MI+ ++ ++ + PD YT ++L AR
Sbjct: 64 HIQHPTICIFNTMIKALLLRGEFLNAIAVFSAIFRNGIHPDTYTLPYVLKASARMTNIHL 123
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKG 196
GE +H + G N F+ +L+ +Y + AR +FD+MP S VSW ++ G
Sbjct: 124 GESIHACTIKLGSAVNEFVGNSLLVMYRSFDN---MRSARQVFDEMPELSAVSWTVMIYG 180
Query: 197 YVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVAL 256
Y GD+D A ++FD ++ W MISG QN ++ L +F M+ V D+ +
Sbjct: 181 YANMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAII 240
Query: 257 VAALSACAEIGDLKLGKWIHSYVEENFSVGR--EPVLVSLNNALIHMYASCGEIEEAYGV 314
V LSACA +G L G WIH Y +GR P+ + ++ LI MYA CG ++ A +
Sbjct: 241 VTILSACAHMGALDTGIWIHRY------LGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYL 294
Query: 315 FRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFV 359
F +M +R+ V W +MI+G A G + A+ +TF+ VL+ACS+ G V
Sbjct: 295 FNEMSQRDNVCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMV 354
Query: 360 DEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP--MKPNDAVLG-- 415
DEG + + M+ I+P+ EHYGC++DL SR G +EA ++Q +P P++ +
Sbjct: 355 DEGIRIWNRMSTVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWR 414
Query: 416 SLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIK 475
+ L C H + A A++L E+ +G L++N+YAA + +D VR M
Sbjct: 415 AFLSACCKHGQTQQAEVAAERL---FQLERHSGAYVLLSNMYAALGKHEDAKRVRNMMKL 471
Query: 476 MGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLG 535
GV K PG S +++NGV+++F+AG+ T++ I+ L E+ Q ++ + IS +G
Sbjct: 472 KGVEKVPGCSSIKVNGVVNEFIAGEKTHRHIDNIHLVLEELNKQIVEADLEGIISTAHIG 531
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 168/556 (30%), Positives = 286/556 (51%), Gaps = 67/556 (12%)
Query: 8 PANPATSSKALTTRQIF----SLLQIRNTTKTLF---QIHSQIIINGFSQKNYILAKLLA 60
P P+T+ + ++ + S+LQ + +L Q+H +++++G + KL+
Sbjct: 46 PPPPSTNPRLASSPHAYHHHTSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVD 105
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y G + +A ++F+ + +WN +IR +AR E +V LY+ M++ EPD +T
Sbjct: 106 LYAACGQVGHARRLFDGMPKRNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFT 165
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLF 179
Y +L CA G +VH RV + + +VF+ ++++Y +CG V AR +F
Sbjct: 166 YPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMY----AKCGCVDDARAVF 221
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
D + R V WNS++ Y QNG+ +AL+
Sbjct: 222 DGIAVRDAVVWNSMIAAY-------------------------------GQNGRPMEALA 250
Query: 240 LFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV-EENFSVGREPVLVSLNNAL 298
L +M +G LV+A+SA A+ L G+ +H + F + + L +L
Sbjct: 251 LCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDK-----LKTSL 305
Query: 299 IHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--------------- 343
+ MYA G ++ A +F ++ +R VSW +MI G+ G+A EAL
Sbjct: 306 VDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPD 365
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
+TF+GVLSAC+HGG V+E ++FF M + IKP ++HY C++D+ G +EA+ L+
Sbjct: 366 NITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLI 425
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKR 462
+ M ++P+ + G+LL GC+IH N EL QKL+ E++PE A Y+ L +N+YA + +
Sbjct: 426 KGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLI-ELEPEDAGNYVHL-SNIYAQSGK 483
Query: 463 WQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQ 522
W+ A VR+ M G++K SW+++ G H F+ GD+++ ++ IY L +
Sbjct: 484 WEKAARVRKLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGELERLEGLMSD 543
Query: 523 EGYKPDISELFLGIEE 538
GY PDI +F +++
Sbjct: 544 AGYVPDIIPVFHNVDD 559
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 256/517 (49%), Gaps = 60/517 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
QIHS G +Y+L ++ Y G + A +F + P +N MI G+ +
Sbjct: 242 QIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNG 301
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E S+ L+K+++ + T L+ V L +HG L S + S+ + T
Sbjct: 302 ETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLIY---AIHGYSLKSNFLSHTSVST 358
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L +Y K +I+ A K+FDE P ++
Sbjct: 359 ALTTVY----------------------------------SKLNEIESARKLFDESPEKS 384
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+ SW MISG QNG + A+SLF EM+ + + V + LSACA++G L LGKW+H
Sbjct: 385 LPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHD 444
Query: 278 YVEE-NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
V +F + ++ ALI MYA CG I EA +F M ++N V+W +MI+G+
Sbjct: 445 LVRSTDFESS-----IYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLH 499
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G+ QEAL +TFL VL ACSH G V EG + F M +G +P ++H
Sbjct: 500 GHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKH 559
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
Y C+VD+ RAG + A ++ MP++P +V +LL CRIH + LA V++KL E+
Sbjct: 560 YACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLF-EL 618
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
DP+ GY L++N+++A + + A VRQ K + K PG + ++I H F +GD
Sbjct: 619 DPDN-VGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQ 677
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++ Q I++ L ++ + + GY+P+ +EE
Sbjct: 678 SHPQVKAIHEKLEKLEGKMREAGYQPETELALHDVEE 714
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 152/330 (46%), Gaps = 38/330 (11%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEK 77
++ L + + L Q H+QI+++GF +L KL G + A +F
Sbjct: 18 ISKNNFLDLFKRSTSISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLS 77
Query: 78 TENPSTAIWNQMIRGHARSETPEKSVYLYKQM-IDKETEPDEYTYSFLLSVCARCGLFRE 136
+ P ++N ++RG + +E+P S+ ++ + + +P+ TY+F +S + R
Sbjct: 78 VQRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRA 137
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKG 196
G +HG+ + G S + + +N++ +Y V AR +FD MP + + WN+++ G
Sbjct: 138 GCVIHGQAIVDGCDSELLLGSNIVKMYFKF---WRVEDARKVFDRMPEKDTILWNTMISG 194
Query: 197 YVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVAL 256
Y K + ++F R++++ C + LD L
Sbjct: 195 YRKNEMYVESIQVF-----RDLIN-----ESCTR--------------------LDTTTL 224
Query: 257 VAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFR 316
+ L A AE+ +L+LG IHS + + VL I +Y+ CG+I+ A +FR
Sbjct: 225 LDILPAVAELQELRLGMQIHSLATKTGCYSHDYVL----TGFISLYSKCGKIKMASTLFR 280
Query: 317 KMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
+ +R + V++ +MI G+ G + +L F
Sbjct: 281 EFRRPDIVAYNAMIHGYTSNGETELSLSLF 310
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 119/236 (50%), Gaps = 9/236 (3%)
Query: 14 SSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHK 73
S L + + SL+ + ++ IH + + F + L Y + +A K
Sbjct: 316 SGAKLKSSTLVSLVPVSGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARK 375
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGL 133
+F+++ S WN MI G+ ++ E ++ L+++M + E P+ T + +LS CA+ G
Sbjct: 376 LFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGA 435
Query: 134 FREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNS 192
G+ VH V ++ + S++++ T L+ +Y +CG + AR LFD MP ++ V+WN+
Sbjct: 436 LSLGKWVHDLVRSTDFESSIYVSTALIGMY----AKCGSIAEARRLFDFMPKKNEVTWNT 491
Query: 193 LLKGYVKRGDIDGAWKIFDEMPHRNV----VSWTTMISGCAQNGKSRQALSLFNEM 244
++ GY G A IF EM + + V++ ++ C+ G ++ +FN M
Sbjct: 492 MISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSM 547
>gi|347954512|gb|AEP33756.1| chloroplast biogenesis 19, partial [Raphanus sativus]
Length = 476
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 162/436 (37%), Positives = 255/436 (58%), Gaps = 47/436 (10%)
Query: 115 EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSN-VFIRTNLMNLYLMSGGECGVG 173
EP+ T LLS C+ C G+ +HG G+ N V + T ++ +Y
Sbjct: 66 EPNHITLIALLSGCSDCEPL--GDSLHGYACKLGFDRNHVMVGTAILGMY---SKRRRFR 120
Query: 174 CARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGK 233
ARL+FD M + V+WN+++ GY R+++S T MI+G + G
Sbjct: 121 KARLVFDRMGDXNSVTWNTMIDGYX-----------------RDLISXTXMINGFVKKGL 163
Query: 234 SRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYV-EENFSVGREPVLV 292
+ +AL+ F EM+ + V D VA++AAL+AC +G L G W+H YV ++F V
Sbjct: 164 NEEALAWFREMQVSGVEPDYVAIIAALAACTNLGALSFGLWVHRYVVSQDFKNN-----V 218
Query: 293 SLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALL-------- 344
++N+LI +Y CG +E A VF KM++R VSW S+I GFA G+A E+L+
Sbjct: 219 RVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGHAHESLVYFRKMQEE 278
Query: 345 -------TFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDE 397
TF G L+ACSH G V+EG ++FE M +++ I PRIEHYGC+VDL+SRAG +++
Sbjct: 279 RFKPDAVTFTGALTACSHVGLVEEGVRYFEAMKRDYRISPRIEHYGCLVDLYSRAGRLED 338
Query: 398 AFSLVQNMPMKPNDAVLGSLLLGCRIH-NNAELASQVAQKLVAEIDPEQAAGYLALVANV 456
A +V++MPMKPN+ V+GSLL CR H N+ ELA ++ + L +E+ + + Y+ L +N+
Sbjct: 339 ALKVVESMPMKPNEVVIGSLLAACRTHGNDTELAERMMKHL-SELKVKSHSNYVIL-SNM 396
Query: 457 YAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEI 516
YAA +W+ + +R+KM +G++K PG S ++I+ H F+AGDS + + + I + + I
Sbjct: 397 YAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDRTHVFMAGDSAHVETAYIREVVELI 456
Query: 517 TMQAMQEGYKPDISEL 532
+ + +G ++S L
Sbjct: 457 SSDSRLQGSVVELSTL 472
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 138/335 (41%), Gaps = 62/335 (18%)
Query: 47 GFSQKNYILAK-LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHAR---SETP--- 99
GF + + ++ +L Y A VF++ + ++ WN MI G+ R S T
Sbjct: 97 GFDRNHVMVGTAILGMYSKRRRFRKARLVFDRMGDXNSVTWNTMIDGYXRDLISXTXMIN 156
Query: 100 --------EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCS 151
E+++ +++M EPD L+ C G G VH V++ + +
Sbjct: 157 GFVKKGLNEEALAWFREMQVSGVEPDYVAIIAALAACTNLGALSFGLWVHRYVVSQDFKN 216
Query: 152 NVFIRTNLMNLYLMSGGECGVGC---ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWK 208
NV + +L++LY C GC AR +FD M R+VVSWNS++ G+
Sbjct: 217 NVRVSNSLIDLY------CRCGCVEFARQVFDKMEKRTVVSWNSVIVGF----------- 259
Query: 209 IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGD 268
A NG + ++L F +M+ R D V AL+AC+ +G
Sbjct: 260 --------------------AANGHAHESLVYFRKMQEERFKPDAVTFTGALTACSHVGL 299
Query: 269 LKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWT 327
++ G ++ ++ + + L+ +Y+ G +E+A V M + N V
Sbjct: 300 VEEGVRYFEAMKRDYRISPR---IEHYGCLVDLYSRAGRLEDALKVVESMPMKPNEVVIG 356
Query: 328 SMITGFAKQGYAQ---EALLTFLGVLSACSHGGFV 359
S++ G E ++ L L SH +V
Sbjct: 357 SLLAACRTHGNDTELAERMMKHLSELKVKSHSNYV 391
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 37/218 (16%)
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VSWT+ I+ ++NG+ +A MR A V + + L+A LS C++ LG +H
Sbjct: 34 TVSWTSRITLLSRNGRLAEAAKELTAMRLAGVEPNHITLIALLSGCSDCE--PLGDSLHG 91
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSW----------- 326
Y +G + V + A++ MY+ +A VF +M N+V+W
Sbjct: 92 YA---CKLGFDRNHVMVGTAILGMYSKRRRFRKARLVFDRMGDXNSVTWNTMIDGYXRDL 148
Query: 327 ---TSMITGFAKQGYAQEALLTF---------------LGVLSACSHGGFVDEGRQFFE- 367
T MI GF K+G +EAL F + L+AC++ G + G
Sbjct: 149 ISXTXMINGFVKKGLNEEALAWFREMQVSGVEPDYVAIIAALAACTNLGALSFGLWVHRY 208
Query: 368 CMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
++Q++ R+ + ++DL+ R G ++ A + M
Sbjct: 209 VVSQDFKNNVRVSN--SLIDLYCRCGCVEFARQVFDKM 244
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H ++ F + L+ Y G + A +VF+K E + WN +I G A +
Sbjct: 205 VHRYVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGH 264
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+S+ +++M ++ +PD T++ L+ C+ GL EG
Sbjct: 265 AHESLVYFRKMQEERFKPDAVTFTGALTACSHVGLVEEG 303
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,211,897,981
Number of Sequences: 23463169
Number of extensions: 326914576
Number of successful extensions: 895123
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7505
Number of HSP's successfully gapped in prelim test: 3649
Number of HSP's that attempted gapping in prelim test: 726086
Number of HSP's gapped (non-prelim): 53853
length of query: 538
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 390
effective length of database: 8,886,646,355
effective search space: 3465792078450
effective search space used: 3465792078450
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)