BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044988
(538 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 399 bits (1025), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/533 (38%), Positives = 318/533 (59%), Gaps = 27/533 (5%)
Query: 22 QIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS---GYLINAHKVFEKT 78
+ S LQ + + L QIH++++ G Q +Y + K L+F ++S +L A VF+
Sbjct: 16 ETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGF 75
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE 138
+ P T +WN MIRG + S+ PE+S+ LY++M+ + YT+ LL C+ F E
Sbjct: 76 DRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETT 135
Query: 139 QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYV 198
Q+H ++ GY ++V+ +L+N Y ++G A LLFD +P VSWNS++KGYV
Sbjct: 136 QIHAQITKLGYENDVYAVNSLINSYAVTGN---FKLAHLLFDRIPEPDDVSWNSVIKGYV 192
Query: 199 KRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVA 258
K G +D A +F +M +N +SWTTMISG Q +++AL LF+EM+ + V D V+L
Sbjct: 193 KAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLAN 252
Query: 259 ALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM 318
ALSACA++G L+ GKWIHSY+ + R + L LI MYA CGE+EEA VF+ +
Sbjct: 253 ALSACAQLGALEQGKWIHSYLNKT----RIRMDSVLGCVLIDMYAKCGEMEEALEVFKNI 308
Query: 319 QRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGR 363
++++ +WT++I+G+A G+ +EA+ +TF VL+ACS+ G V+EG+
Sbjct: 309 KKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGK 368
Query: 364 QFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRI 423
F M +++ +KP IEHYGC+VDL RAGL+DEA +Q MP+KPN + G+LL CRI
Sbjct: 369 LIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRI 428
Query: 424 HNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPG 483
H N EL ++ + L+A IDP Y+ AN++A K+W A R+ M + GV K PG
Sbjct: 429 HKNIELGEEIGEILIA-IDPYHGGRYVH-KANIHAMDKKWDKAAETRRLMKEQGVAKVPG 486
Query: 484 QSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGI 536
S + + G H+F+AGD ++ + I + + + GY P++ E+ L +
Sbjct: 487 CSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDL 539
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 364 bits (934), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 203/549 (36%), Positives = 321/549 (58%), Gaps = 47/549 (8%)
Query: 28 QIRN--TTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY----LINAHKVFEKTENP 81
QI N T + L QIH+ I +G + A++L F TS L AHK+F +
Sbjct: 29 QINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQR 88
Query: 82 STAIWNQMIRGHARSETPEKSVYL---YKQMIDKETEPDEYTYSFLLSVCARCGLFREGE 138
+ WN +IRG + S+ + + + Y+ M D+ EP+ +T+ +L CA+ G +EG+
Sbjct: 89 NCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGK 148
Query: 139 QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLF------DDMPARS------ 186
Q+HG L G+ + F+ +NL+ +Y+M G + AR+LF DM +
Sbjct: 149 QIHGLALKYGFGGDEFVMSNLVRMYVMCGF---MKDARVLFYKNIIEKDMVVMTDRRKRD 205
Query: 187 --VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
+V WN ++ GY++ GD A +FD+M R+VVSW TMISG + NG + A+ +F EM
Sbjct: 206 GEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM 265
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYAS 304
++ + + V LV+ L A + +G L+LG+W+H Y E++ + + VL S ALI MY+
Sbjct: 266 KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDS-GIRIDDVLGS---ALIDMYSK 321
Query: 305 CGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGV 349
CG IE+A VF ++ R N ++W++MI GFA G A +A+ + ++ +
Sbjct: 322 CGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINL 381
Query: 350 LSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKP 409
L+ACSHGG V+EGR++F M G++PRIEHYGCMVDL R+GL+DEA + NMP+KP
Sbjct: 382 LTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKP 441
Query: 410 NDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAV 469
+D + +LL CR+ N E+ +VA L+ ++ P + Y+AL +N+YA+ W +V+ +
Sbjct: 442 DDVIWKALLGACRMQGNVEMGKRVANILM-DMVPHDSGAYVAL-SNMYASQGNWSEVSEM 499
Query: 470 RQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDI 529
R +M + +RK PG S + I+GVLH+FV D ++ +A I L EI+ + GY+P
Sbjct: 500 RLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPIT 559
Query: 530 SELFLGIEE 538
+++ L +EE
Sbjct: 560 TQVLLNLEE 568
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 355 bits (912), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 192/530 (36%), Positives = 307/530 (57%), Gaps = 62/530 (11%)
Query: 31 NTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS----GYLINAHKVFEKTENP-STAI 85
++ L QIH+ I +G S + L K L FY+ S + AHKVF K E P + I
Sbjct: 28 SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87
Query: 86 WNQMIRGHARSETPEKSVYLYKQM-IDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRV 144
WN +IRG+A + LY++M + EPD +TY FL+ R GE +H V
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 145 LASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDID 204
+ SG+ S ++++ +L++LY CG D+
Sbjct: 148 IRSGFGSLIYVQNSLLHLY----ANCG------------------------------DVA 173
Query: 205 GAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACA 264
A+K+FD+MP +++V+W ++I+G A+NGK +AL+L+ EM + D +V+ LSACA
Sbjct: 174 SAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACA 233
Query: 265 EIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTV 324
+IG L LGK +H Y+ VG L S +N L+ +YA CG +EEA +F +M +N+V
Sbjct: 234 KIGALTLGKRVHVYM---IKVGLTRNLHS-SNVLLDLYARCGRVEEAKTLFDEMVDKNSV 289
Query: 325 SWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFEC 368
SWTS+I G A G+ +EA+ +TF+G+L ACSH G V EG ++F
Sbjct: 290 SWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRR 349
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAE 428
M + + I+PRIEH+GCMVDL +RAG + +A+ +++MPM+PN + +LL C +H +++
Sbjct: 350 MREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD 409
Query: 429 LASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
LA + A+ + +++P + Y+ L++N+YA+ +RW DV +R++M++ GV+K PG S V+
Sbjct: 410 LA-EFARIQILQLEPNHSGDYV-LLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVE 467
Query: 489 INGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ +H+F+ GD ++ Q+ IY L E+T + EGY P IS +++ +EE
Sbjct: 468 VGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEE 517
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 352 bits (903), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 184/534 (34%), Positives = 314/534 (58%), Gaps = 28/534 (5%)
Query: 24 FSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSG--YLINAHKVFEKTENP 81
+LL T K + QIH+++ ++G + ++++ + S YL A+++ +++E P
Sbjct: 10 IALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKP 69
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMID--KETEPDEYTYSFLLSVCARCGLFREGEQ 139
+ N MIR H +S PEKS Y++++ + +PD YT +FL+ C + G Q
Sbjct: 70 TLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQ 129
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVK 199
VHG + G+ ++ ++T L++LY G C C ++ F+ +P V +++ +
Sbjct: 130 VHGMTIRRGFDNDPHVQTGLISLYAELG--CLDSCHKV-FNSIPCPDFVCRTAMVTACAR 186
Query: 200 RGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAA 259
GD+ A K+F+ MP R+ ++W MISG AQ G+SR+AL++F+ M+ V ++ VA+++
Sbjct: 187 CGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISV 246
Query: 260 LSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ 319
LSAC ++G L G+W HSY+E N + + V L L+ +YA CG++E+A VF M+
Sbjct: 247 LSACTQLGALDQGRWAHSYIERN----KIKITVRLATTLVDLYAKCGDMEKAMEVFWGME 302
Query: 320 RRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQ 364
+N +W+S + G A G+ ++ L +TF+ VL CS GFVDEG++
Sbjct: 303 EKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQR 362
Query: 365 FFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIH 424
F+ M +GI+P++EHYGC+VDL++RAG +++A S++Q MPMKP+ AV SLL R++
Sbjct: 363 HFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMY 422
Query: 425 NNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQ 484
N EL ++K++ E++ Y+ L++N+YA + W +V+ VRQ M GVRK PG
Sbjct: 423 KNLELGVLASKKML-ELETANHGAYV-LLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGC 480
Query: 485 SWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
S +++NG +H+F GD ++ + + I +I+ + GYK D + + I+E
Sbjct: 481 SVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDE 534
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 350 bits (899), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 187/513 (36%), Positives = 293/513 (57%), Gaps = 26/513 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H ++ G Y+ L+ Y G + A VF++ WN MI G+ R +
Sbjct: 156 KLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMK 215
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
E+S+ L +M P T +LS C++ ++VH V ++ +
Sbjct: 216 EYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLEN 275
Query: 158 NLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L+N Y CG + A +F M AR V+SW S++KGYV+RG++ A FD+MP R
Sbjct: 276 ALVNAY----AACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVR 331
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
+ +SWT MI G + G ++L +F EM+ A + D+ +V+ L+ACA +G L++G+WI
Sbjct: 332 DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIK 391
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+Y+++N + + V + NALI MY CG E+A VF M +R+ +WT+M+ G A
Sbjct: 392 TYIDKN-KIKND---VVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANN 447
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G QEA+ +T+LGVLSAC+H G VD+ R+FF M + I+P + H
Sbjct: 448 GQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVH 507
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YGCMVD+ RAGL+ EA+ +++ MPM PN V G+LL R+HN+ +A A+K++ E+
Sbjct: 508 YGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKIL-EL 566
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+P+ A Y AL+ N+YA KRW+D+ VR+K++ + ++K PG S +++NG H+FVAGD
Sbjct: 567 EPDNGAVY-ALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDK 625
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFL 534
++ Q+ IY L E+ ++ Y PD SEL
Sbjct: 626 SHLQSEEIYMKLEELAQESTFAAYLPDTSELLF 658
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 200/416 (48%), Gaps = 71/416 (17%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVT--SGYLIN 70
T S + + S+L + TT Q+HSQ I G + KL F+ + G++
Sbjct: 27 TESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSY 86
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
A+K+F K P +WN MI+G ++ + + V LY M+ + PD +T+ FLL+ R
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR 146
Query: 131 -CGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV-GCARLLFDDMPARSVV 188
G G+++H V+ G SN++++ L+ +Y + CG+ AR +FD V
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSL----CGLMDMARGVFDRRCKEDVF 202
Query: 189 SWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR 248
SWN ++ GY + + + + ++ EM RN+VS T+
Sbjct: 203 SWNLMISGYNRMKEYEESIELLVEM-ERNLVSPTS------------------------- 236
Query: 249 VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEI 308
V L+ LSAC+++ D L K +H YV E EP L L NAL++ YA+CGE+
Sbjct: 237 -----VTLLLVLSACSKVKDKDLCKRVHEYVSE---CKTEPSL-RLENALVNAYAACGEM 287
Query: 309 EEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFEC 368
+ A +FR M+ R+ +SWTS++ G+ ++G + A R +F+
Sbjct: 288 DIAVRIFRSMKARDVISWTSIVKGYVERGNLKLA--------------------RTYFDQ 327
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMP---MKPNDAVLGSLLLGC 421
M ++ RI + M+D + RAG +E+ + + M M P++ + S+L C
Sbjct: 328 M----PVRDRIS-WTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTAC 378
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 349 bits (896), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 187/515 (36%), Positives = 293/515 (56%), Gaps = 27/515 (5%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+HS I + F YI + L+ Y G + +A +VF++ + + WN +I ++
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNG 232
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ +++ M++ EPDE T + ++S CA + G++VHGRV+ + N I +
Sbjct: 233 PAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILS 292
Query: 158 N-LMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
N +++Y +C + AR +FD MP R+V++ S++ GY A +F +M
Sbjct: 293 NAFVDMY----AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAE 348
Query: 216 RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWI 275
RNVVSW +I+G QNG++ +ALSLF ++R V + L ACA++ +L LG
Sbjct: 349 RNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQA 408
Query: 276 HSYVEEN---FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
H +V ++ F G E + + N+LI MY CG +EE Y VFRKM R+ VSW +MI G
Sbjct: 409 HVHVLKHGFKFQSGEEDDIF-VGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIG 467
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
FA+ GY EAL +T +GVLSAC H GFV+EGR +F M +++G+ P
Sbjct: 468 FAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAP 527
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
+HY CMVDL RAG ++EA S+++ MPM+P+ + GSLL C++H N L VA+KL
Sbjct: 528 LRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKL 587
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
+ E++P + Y+ L++N+YA +W+DV VR+ M K GV K PG SW++I G H F+
Sbjct: 588 L-EVEPSNSGPYV-LLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFM 645
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQEGYKPDISEL 532
D ++ + I+ L + + E +I L
Sbjct: 646 VKDKSHPRKKQIHSLLDILIAEMRPEQDHTEIGSL 680
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 152/287 (52%), Gaps = 28/287 (9%)
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYV 198
VH V+ SG+ + +FI+ L++ Y +CG + R +FD MP R++ +WNS++ G
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAY----SKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLT 97
Query: 199 KRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVA 258
K G +D A +F MP R+ +W +M+SG AQ+ + +AL F M + L++ + +
Sbjct: 98 KLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFAS 157
Query: 259 ALSACAEIGDLKLGKWIHSYVEENFSVGREPVL--VSLNNALIHMYASCGEIEEAYGVFR 316
LSAC+ + D+ G +HS + + P L V + +AL+ MY+ CG + +A VF
Sbjct: 158 VLSACSGLNDMNKGVQVHSL------IAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFD 211
Query: 317 KMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDE 361
+M RN VSW S+IT F + G A EAL +T V+SAC+ +
Sbjct: 212 EMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKV 271
Query: 362 GRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
G++ + +N ++ I VD++++ + EA + +MP++
Sbjct: 272 GQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Score = 138 bits (348), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 161/340 (47%), Gaps = 70/340 (20%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPST--------------- 83
+H+ +I +GFS + +I +L+ Y G L + +VF+K +
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 84 ----------------AIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSV 127
WN M+ G A+ + E+++ + M + +EY+++ +LS
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 128 CARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARS 186
C+ +G QVH + S + S+V+I + L+++Y +CG V A+ +FD+M R+
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY----SKCGNVNDAQRVFDEMGDRN 217
Query: 187 VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRR 246
VVSWNSL+ + QNG + +AL +F M
Sbjct: 218 VVSWNSLITCF-------------------------------EQNGPAVEALDVFQMMLE 246
Query: 247 ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCG 306
+RV D+V L + +SACA + +K+G+ +H V +N + + + L+NA + MYA C
Sbjct: 247 SRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDII---LSNAFVDMYAKCS 303
Query: 307 EIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
I+EA +F M RN ++ TSMI+G+A + A L F
Sbjct: 304 RIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMF 343
>sp|Q9FMA1|PP433_ARATH Pentatricopeptide repeat-containing protein At5g56310
OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1
Length = 530
Score = 347 bits (889), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 191/509 (37%), Positives = 299/509 (58%), Gaps = 29/509 (5%)
Query: 31 NTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMI 90
N KTL Q H +II G ++ N +AK + +G+L A+ VF P+T + N MI
Sbjct: 26 NNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMI 85
Query: 91 RGHARSETPEK---SVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLAS 147
R + + P ++ +Y+++ +PD +T+ F+L + R G Q+HG+V+
Sbjct: 86 RALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVF 145
Query: 148 GYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAW 207
G+ S+V + T L+ +Y GG +G AR +FD+M + V WN+LL GY K G++D A
Sbjct: 146 GFDSSVHVVTGLIQMYFSCGG---LGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEAR 202
Query: 208 KIFDEMPH--RNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAE 265
+ + MP RN VSWT +ISG A++G++ +A+ +F M V D+V L+A LSACA+
Sbjct: 203 SLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACAD 262
Query: 266 IGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVS 325
+G L+LG+ I SYV+ + R VSLNNA+I MYA G I +A VF + RN V+
Sbjct: 263 LGSLELGERICSYVDHR-GMNRA---VSLNNAVIDMYAKSGNITKALDVFECVNERNVVT 318
Query: 326 WTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMN 370
WT++I G A G+ EAL +TF+ +LSACSH G+VD G++ F M
Sbjct: 319 WTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMR 378
Query: 371 QNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELA 430
+GI P IEHYGCM+DL RAG + EA ++++MP K N A+ GSLL +H++ EL
Sbjct: 379 SKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELG 438
Query: 431 SQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQIN 490
+ +L+ +++P + Y+ L+AN+Y+ RW + +R M +GV+K G+S +++
Sbjct: 439 ERALSELI-KLEPNNSGNYM-LLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVE 496
Query: 491 GVLHDFVAGDSTYKQASLIYKTLGEITMQ 519
++ F++GD T+ Q I++ L E+ +Q
Sbjct: 497 NRVYKFISGDLTHPQVERIHEILQEMDLQ 525
>sp|Q9SIL5|PP165_ARATH Pentatricopeptide repeat-containing protein At2g20540
OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1
Length = 534
Score = 334 bits (857), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 179/515 (34%), Positives = 298/515 (57%), Gaps = 25/515 (4%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+I++ III+G SQ ++++ K++ F + A ++F + NP+ ++N +IR + +
Sbjct: 28 KINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNS 87
Query: 98 TPEKSVYLYKQMIDKETE-PDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
+ +YKQ++ K E PD +T+ F+ CA G G+QVHG + G +V
Sbjct: 88 LYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTE 147
Query: 157 TNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
L+++Y+ A +FD+M R V+SWNSLL GY + G + A +F M +
Sbjct: 148 NALIDMYMKFDDLVD---AHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDK 204
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
+VSWT MISG G +A+ F EM+ A + D+++L++ L +CA++G L+LGKWIH
Sbjct: 205 TIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIH 264
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
Y E + + V NALI MY+ CG I +A +F +M+ ++ +SW++MI+G+A
Sbjct: 265 LYAERRGFLKQTGVC----NALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYH 320
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G A A+ +TFLG+LSACSH G EG ++F+ M Q++ I+P+IEH
Sbjct: 321 GNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEH 380
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YGC++D+ +RAG ++ A + + MPMKP+ + GSLL CR N ++A VA + E+
Sbjct: 381 YGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVA-LVAMDHLVEL 439
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
+PE Y+ L+AN+YA +W+DV+ +R+ + ++K PG S +++N ++ +FV+GD+
Sbjct: 440 EPEDMGNYV-LLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDN 498
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGI 536
+ + I L T Q+ + + F+GI
Sbjct: 499 SKPFWTEISIVLQLFTSHQDQDVITNNNALAFIGI 533
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 334 bits (856), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 194/565 (34%), Positives = 315/565 (55%), Gaps = 71/565 (12%)
Query: 1 MLVEEIIPANPATSSKALTT-----RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKN--- 52
+LV + P P SS + +T ++IFSL + + L Q+H+ + + ++
Sbjct: 24 LLVHPLSPHIPPASSPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATL 83
Query: 53 YILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET-PEKSVYLYKQMID 111
++ K+L + + A +VF+ EN S+ +WN +IR A + E++ LY++M++
Sbjct: 84 FLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLE 143
Query: 112 K-ETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGEC 170
+ E+ PD++T+ F+L CA F EG+QVH +++ G+ +V++ L++LY G C
Sbjct: 144 RGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLY----GSC 199
Query: 171 G-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCA 229
G + AR +FD+MP RS+VSWNS++ V+ G+ D
Sbjct: 200 GCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDS------------------------ 235
Query: 230 QNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREP 289
AL LF EM+R+ D + + LSACA +G L LG W H+++ V
Sbjct: 236 -------ALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVD-VA 286
Query: 290 VLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------ 343
+ V + N+LI MY CG + A VF+ MQ+R+ SW +MI GFA G A+EA+
Sbjct: 287 MDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRM 346
Query: 344 -----------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRA 392
+TF+G+L AC+H GFV++GRQ+F+ M +++ I+P +EHYGC+VDL +RA
Sbjct: 347 VDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARA 406
Query: 393 GLMDEAFSLVQNMPMKPNDAVLGSLLLG-CRIHNNAELASQVAQKLVAEIDPEQA----- 446
G + EA +V +MPMKP+ + SLL C+ + EL+ ++A+ ++ + ++
Sbjct: 407 GYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNC 466
Query: 447 AGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQA 506
+G L++ VYA+A RW DV VR+ M + G+RK PG S ++ING+ H+F AGD+++ Q
Sbjct: 467 SGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQT 526
Query: 507 SLIYKTLGEITMQAMQEGYKPDISE 531
IY+ L I + GY PD S+
Sbjct: 527 KQIYQQLKVIDDRLRSIGYLPDRSQ 551
>sp|P0C8Q7|PP369_ARATH Pentatricopeptide repeat-containing protein At5g08305
OS=Arabidopsis thaliana GN=PCMP-E105 PE=2 SV=1
Length = 534
Score = 334 bits (856), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 191/523 (36%), Positives = 298/523 (56%), Gaps = 38/523 (7%)
Query: 14 SSKALTTRQIFSLLQIRNTTKT---LFQIHSQIIINGFSQKNYILAKLLAFYV--TSGYL 68
SS +L + I +R+ K+ L++IH+ +I G S++ +++ L+F +SG +
Sbjct: 4 SSSSLVAKSI-----LRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDV 58
Query: 69 INAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVC 128
A+K K +P WN +IRG + S PEKS+ +Y QM+ PD TY FL+
Sbjct: 59 DYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSS 118
Query: 129 ARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVV 188
+R + G +H V+ SG ++FI L+++Y G AR LFD+MP +++V
Sbjct: 119 SRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMY---GSFRDQASARKLFDEMPHKNLV 175
Query: 189 SWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE-MRRA 247
+WNS+L Y K GD+ A +FDEM R+VV+W++MI G + G+ +AL +F++ MR
Sbjct: 176 TWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMG 235
Query: 248 RVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGE 307
++V +V+ + ACA +G L GK +H Y+ + P+ V L +LI MYA CG
Sbjct: 236 SSKANEVTMVSVICACAHLGALNRGKTVHRYILDV----HLPLTVILQTSLIDMYAKCGS 291
Query: 308 IEEAYGVFRKMQRRNT--VSWTSMITGFAKQGYAQEAL---------------LTFLGVL 350
I +A+ VF + + T + W ++I G A G+ +E+L +TFL +L
Sbjct: 292 IGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLL 351
Query: 351 SACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPN 410
+ACSHGG V E FF+ + ++ G +P+ EHY CMVD+ SRAGL+ +A + MP+KP
Sbjct: 352 AACSHGGLVKEAWHFFKSLKES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPT 410
Query: 411 DAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVR 470
++LG+LL GC H N ELA V +KL+ E+ P Y+ L ANVYA K+++ ++R
Sbjct: 411 GSMLGALLNGCINHGNLELAETVGKKLI-ELQPHNDGRYVGL-ANVYAINKQFRAARSMR 468
Query: 471 QKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTL 513
+ M K GV+K G S + ++G H F+A D T+ + IY L
Sbjct: 469 EAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVL 511
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 333 bits (854), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 186/542 (34%), Positives = 298/542 (54%), Gaps = 32/542 (5%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLIN-- 70
++ K L + S L + QIH ++ G Q YIL KL+ G ++
Sbjct: 42 SNQKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPY 101
Query: 71 AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR 130
A +V E + + +W +IRG+A ++++ +Y M +E P +T+S LL C
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 131 CGLFREGEQVHGRVLA-SGYCSNVFIRTNLMNLYLMSGGEC-GVGCARLLFDDMPARSVV 188
G Q H + G+C V++ ++++Y+ +C + CAR +FD+MP R V+
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCF-VYVGNTMIDMYV----KCESIDCARKVFDEMPERDVI 216
Query: 189 SWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR 248
SW L+ Y + G+++ A ++F+ +P +++V+WT M++G AQN K ++AL F+ M ++
Sbjct: 217 SWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSG 276
Query: 249 VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPV-LVSLNNALIHMYASCGE 307
+ D+V + +SACA++G K+ V+ G P V + +ALI MY+ CG
Sbjct: 277 IRADEVTVAGYISACAQLG---ASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGN 333
Query: 308 IEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLS 351
+EEA VF M +N +++SMI G A G AQEAL +TF+G L
Sbjct: 334 VEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALM 393
Query: 352 ACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPND 411
ACSH G VD+GRQ F+ M Q +G++P +HY CMVDL R G + EA L++ M ++P+
Sbjct: 394 ACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHG 453
Query: 412 AVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQ 471
V G+LL CRIHNN E+A A+ L E++P+ Y+ L++NVYA+A W V VR+
Sbjct: 454 GVWGALLGACRIHNNPEIAEIAAEHLF-ELEPDIIGNYI-LLSNVYASAGDWGGVLRVRK 511
Query: 472 KMIKMGVRKPPGQSW-VQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
+ + G++K P SW V NG +H F G+ + ++ I L E+ + GY+PD+S
Sbjct: 512 LIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLS 571
Query: 531 EL 532
+
Sbjct: 572 SV 573
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 332 bits (851), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 194/573 (33%), Positives = 298/573 (52%), Gaps = 62/573 (10%)
Query: 18 LTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVF 75
+ SLL + L QIH I G +Y KL+ S L A ++
Sbjct: 3 IAIHHCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLL 62
Query: 76 EKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKE-TEPDEYTYSFLLSVCARCGLF 134
P ++N ++RG++ S+ P SV ++ +M+ K PD ++++F++
Sbjct: 63 LCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSL 122
Query: 135 REGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG----------------------- 171
R G Q+H + L G S++F+ T L+ +Y G CG
Sbjct: 123 RTGFQMHCQALKHGLESHLFVGTTLIGMY----GGCGCVEFARKVFDEMHQPNLVAWNAV 178
Query: 172 ---------VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWT 222
V AR +FD M R+ SWN +L GY+K G+++ A +IF EMPHR+ VSW+
Sbjct: 179 ITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWS 238
Query: 223 TMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEEN 282
TMI G A NG ++ F E++RA + ++V+L LSAC++ G + GK +H +VE+
Sbjct: 239 TMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEK- 297
Query: 283 FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQ-RRNTVSWTSMITGFAKQGYAQE 341
+VS+NNALI MY+ CG + A VF MQ +R VSWTSMI G A G +E
Sbjct: 298 ---AGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEE 354
Query: 342 AL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMV 386
A+ ++F+ +L ACSH G ++EG +F M + + I+P IEHYGCMV
Sbjct: 355 AVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMV 414
Query: 387 DLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQA 446
DL+ R+G + +A+ + MP+ P V +LL C H N ELA QV Q+L E+DP
Sbjct: 415 DLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRL-NELDPNN- 472
Query: 447 AGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQA 506
+G L L++N YA A +W+DVA++R+ MI ++K S V++ ++ F AG+
Sbjct: 473 SGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGID 532
Query: 507 SLIYKTLGEITMQAMQE-GYKPDISELFLGIEE 538
++ L EI ++ E GY P+++ +EE
Sbjct: 533 IEAHEKLKEIILRLKDEAGYTPEVASALYDVEE 565
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 330 bits (845), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 168/521 (32%), Positives = 293/521 (56%), Gaps = 35/521 (6%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H + + ++ L+ Y + G L +A KVF + WN MI G + +
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
P+K++ L+K+M ++ + T +LS CA+ G QV + + N+ +
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
++++Y G + A+ LFD M + V+W ++L GY D + A ++ + MP +++
Sbjct: 273 MLDMYTKCGS---IEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDI 329
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEMR-RARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
V+W +IS QNGK +AL +F+E++ + + L+Q+ LV+ LSACA++G L+LG+WIHS
Sbjct: 330 VAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHS 389
Query: 278 YVEE-----NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITG 332
Y+++ NF V +ALIHMY+ CG++E++ VF +++R+ W++MI G
Sbjct: 390 YIKKHGIRMNFHV---------TSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGG 440
Query: 333 FAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
A G EA+ +TF V ACSH G VDE F M N+GI P
Sbjct: 441 LAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVP 500
Query: 378 RIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
+HY C+VD+ R+G +++A ++ MP+ P+ +V G+LL C+IH N LA +L
Sbjct: 501 EEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRL 560
Query: 438 VAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFV 497
+ E++P ++ L++N+YA +W++V+ +R+ M G++K PG S ++I+G++H+F+
Sbjct: 561 L-ELEPRNDGAHV-LLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFL 618
Query: 498 AGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+GD+ + + +Y L E+ + GY+P+IS++ IEE
Sbjct: 619 SGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEE 659
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 215/468 (45%), Gaps = 96/468 (20%)
Query: 8 PANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGY 67
P P T+++ +R I SL++ + + L Q H +I G Y +KL A S +
Sbjct: 21 PNQPTTNNE--RSRHI-SLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSF 77
Query: 68 --LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMI-DKETEPDEYTYSFL 124
L A KVF++ P++ WN +IR +A P S++ + M+ + + P++YT+ FL
Sbjct: 78 ASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFL 137
Query: 125 LSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPA 184
+ A G+ +HG + S S+VF+ +L++ Y S G+ C +F +
Sbjct: 138 IKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYF-SCGDLDSACK--VFTTIKE 194
Query: 185 RSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM 244
+ VVSWNS++ G+V++G D A ++F +M +V +
Sbjct: 195 KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKA------------------------ 230
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYAS 304
V +V LSACA+I +L+ G+ + SY+EEN R V ++L NA++ MY
Sbjct: 231 -------SHVTMVGVLSACAKIRNLEFGRQVCSYIEEN----RVNVNLTLANAMLDMYTK 279
Query: 305 CGEIEEAYGVFRKMQRRNTVSWTSMITGFA------------------------------ 334
CG IE+A +F M+ ++ V+WT+M+ G+A
Sbjct: 280 CGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAY 339
Query: 335 -KQGYAQEALLTF----------------LGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
+ G EAL+ F + LSAC+ G ++ GR + ++ GI+
Sbjct: 340 EQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKH-GIRM 398
Query: 378 RIEHYGCMVDLFSRAGLMD---EAFSLVQNMPMKPNDAVLGSLLL-GC 421
++ ++S+ G ++ E F+ V+ + A++G L + GC
Sbjct: 399 NFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGC 446
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 328 bits (842), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 179/539 (33%), Positives = 304/539 (56%), Gaps = 34/539 (6%)
Query: 24 FSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVT-------SGYLINAHKVFE 76
+LLQ ++ L IH ++ ++ ++LLA V + L A+ +F
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
+ +NP+ ++N +IR + P K+ Y QM+ PD T+ FL+ +
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLK 195
GEQ H +++ G+ ++V++ +L+++Y CG + A +F M R VVSW S++
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMY----ANCGFIAAAGRIFGQMGFRDVVSWTSMVA 191
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVA 255
GY K G ++ A ++FDEMPHRN+ +W+ MI+G A+N +A+ LF M+R V ++
Sbjct: 192 GYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETV 251
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
+V+ +S+CA +G L+ G+ + YV ++ V + L AL+ M+ CG+IE+A VF
Sbjct: 252 MVSVISSCAHLGALEFGERAYEYVVKS----HMTVNLILGTALVDMFWRCGDIEKAIHVF 307
Query: 316 RKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVD 360
+ +++SW+S+I G A G+A +A+ +TF VLSACSHGG V+
Sbjct: 308 EGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVE 367
Query: 361 EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLG 420
+G + +E M ++ GI+PR+EHYGC+VD+ RAG + EA + + M +KPN +LG+LL
Sbjct: 368 KGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGA 427
Query: 421 CRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRK 480
C+I+ N E+A +V L+ ++ PE +GY L++N+YA A +W + ++R M + V+K
Sbjct: 428 CKIYKNTEVAERVGNMLI-KVKPEH-SGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKK 485
Query: 481 PPGQSWVQINGVLHDFVAGDS-TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
PPG S ++I+G ++ F GD + + I + EI + GYK + + F ++E
Sbjct: 486 PPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDE 544
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 327 bits (838), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 178/504 (35%), Positives = 275/504 (54%), Gaps = 30/504 (5%)
Query: 53 YILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDK 112
++ + Y + G + A VF++ + WN MI + R +++ L+++M D
Sbjct: 147 FVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDS 206
Query: 113 ETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGV 172
PDE ++S C R G R ++ ++ + + + T L+ +Y G
Sbjct: 207 NVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMY------AGA 260
Query: 173 GC---ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCA 229
GC AR F M R++ +++ GY K G +D A IFD+ +++V WTTMIS
Sbjct: 261 GCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYV 320
Query: 230 QNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREP 289
++ ++AL +F EM + + D V++ + +SACA +G L KW+HS + N G E
Sbjct: 321 ESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVN---GLES 377
Query: 290 VLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------ 343
L S+NNALI+MYA CG ++ VF KM RRN VSW+SMI + G A +AL
Sbjct: 378 EL-SINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARM 436
Query: 344 ---------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGL 394
+TF+GVL CSH G V+EG++ F M + I P++EHYGCMVDLF RA L
Sbjct: 437 KQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANL 496
Query: 395 MDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVA 454
+ EA ++++MP+ N + GSL+ CRIH EL + A K + E++P+ G L L++
Sbjct: 497 LREALEVIESMPVASNVVIWGSLMSACRIHGELELG-KFAAKRILELEPDH-DGALVLMS 554
Query: 455 NVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLG 514
N+YA +RW+DV +R+ M + V K G S + NG H+F+ GD +KQ++ IY L
Sbjct: 555 NIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLD 614
Query: 515 EITMQAMQEGYKPDISELFLGIEE 538
E+ + GY PD + + +EE
Sbjct: 615 EVVSKLKLAGYVPDCGSVLVDVEE 638
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 214/460 (46%), Gaps = 41/460 (8%)
Query: 11 PATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLIN 70
P S+ A T + S + N K Q+H+ I+ + K L+ +S L
Sbjct: 6 PIASTAANTILEKLSFCKSLNHIK---QLHAHILRTVINHKLNSFLFNLSVSSSSINLSY 62
Query: 71 AHKVFEKTENPSTAI-WNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCA 129
A VF +P +I +N +R +RS P ++ Y+++ D++++ +L +
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 130 RCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVV 188
+ EG ++HG + F+ T M++Y CG + AR +FD+M R VV
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMY----ASCGRINYARNVFDEMSHRDVV 178
Query: 189 SWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVS----WTTMISGCAQNGKSRQALSLFNEM 244
+WN++++ Y + G +D A+K+F+EM NV+ ++S C + G R +++ +
Sbjct: 179 TWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFL 238
Query: 245 RRARVGLDQVALVAALSACAEIGDLKLGK-WIHSYVEENFSVGREPVLVSLNNALIHMYA 303
V +D L A ++ A G + + + + N V + A++ Y+
Sbjct: 239 IENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFV---------STAMVSGYS 289
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF---------------LG 348
CG +++A +F + ++++ V WT+MI+ + + Y QEAL F
Sbjct: 290 KCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFS 349
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
V+SAC++ G +D+ + C++ N G++ + +++++++ G +D + + MP +
Sbjct: 350 VISACANLGILDKAKWVHSCIHVN-GLESELSINNALINMYAKCGGLDATRDVFEKMPRR 408
Query: 409 PNDAVLGSLLLGCRIHNNAELASQVAQKLVAE-IDPEQAA 447
N S++ +H A A + ++ E ++P +
Sbjct: 409 -NVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVT 447
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 325 bits (832), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 166/471 (35%), Positives = 278/471 (59%), Gaps = 26/471 (5%)
Query: 59 LAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDE 118
+ + + G + NA KVF+++ WN +I G+ + EK++Y+YK M + +PD+
Sbjct: 198 IHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDD 257
Query: 119 YTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARL 177
T L+S C+ G G++ + V +G + + LM+++ +CG + AR
Sbjct: 258 VTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMF----SKCGDIHEARR 313
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
+FD++ R++VSW +++ GY + G +D + K+FD+M ++VV W MI G Q + + A
Sbjct: 314 IFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDA 373
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
L+LF EM+ + D++ ++ LSAC+++G L +G WIH Y+E+ +S+ V+L +
Sbjct: 374 LALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEK-YSLSLN---VALGTS 429
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------------- 343
L+ MYA CG I EA VF +Q RN++++T++I G A G A A+
Sbjct: 430 LVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPD 489
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
+TF+G+LSAC HGG + GR +F M + + P+++HY MVDL RAGL++EA L+
Sbjct: 490 EITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLM 549
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKR 462
++MPM+ + AV G+LL GCR+H N EL + A+KL+ E+DP + Y+ L+ +Y A
Sbjct: 550 ESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLL-ELDPSDSGIYV-LLDGMYGEANM 607
Query: 463 WQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTL 513
W+D R+ M + GV K PG S +++NG++ +F+ D + ++ IY L
Sbjct: 608 WEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRL 658
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/491 (27%), Positives = 222/491 (45%), Gaps = 94/491 (19%)
Query: 8 PANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV--TS 65
P N ++ + + SLL+ L QI +Q+IING + ++L+AF S
Sbjct: 41 PINWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSES 100
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDK---ETEPDEYTYS 122
YL + K+ + ENP+ WN IRG + SE P++S LYKQM+ E+ PD +TY
Sbjct: 101 RYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYP 160
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDD 181
L VCA L G + G VL + + +++ N + CG + AR +FD+
Sbjct: 161 VLFKVCADLRLSSLGHMILGHVLK----LRLELVSHVHNASIHMFASCGDMENARKVFDE 216
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
P R +VSWN L+ GY K G+ + +A+ ++
Sbjct: 217 SPVRDLVSWNCLINGYKKIGE-------------------------------AEKAIYVY 245
Query: 242 NEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHM 301
M V D V ++ +S+C+ +GDL GK + YV+EN G + + L NAL+ M
Sbjct: 246 KLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN---GLR-MTIPLVNALMDM 301
Query: 302 YASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGY----------------------- 338
++ CG+I EA +F +++R VSWT+MI+G+A+ G
Sbjct: 302 FSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMI 361
Query: 339 --------AQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGI 375
Q+AL +T + LSACS G +D G + + + +
Sbjct: 362 GGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI-EKYSL 420
Query: 376 KPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQ 435
+ +VD++++ G + EA S+ + + N +++ G +H +A A
Sbjct: 421 SLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGDASTAISYFN 479
Query: 436 KLV-AEIDPEQ 445
+++ A I P++
Sbjct: 480 EMIDAGIAPDE 490
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 172/380 (45%), Gaps = 72/380 (18%)
Query: 120 TYSF-----LLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGC 174
T+SF LLS+ +C L +Q+ +++ +G + F + L+ C +
Sbjct: 47 THSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAF-------CALSE 99
Query: 175 ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKS 234
+R L D + KI + + N+ SW I G +++
Sbjct: 100 SRYL-------------------------DYSVKILKGIENPNIFSWNVTIRGFSESENP 134
Query: 235 RQALSLFNEMRR---ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL 291
+++ L+ +M R D CA++ LG I +V + R ++
Sbjct: 135 KESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLK----LRLELV 190
Query: 292 VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------- 343
++NA IHM+ASCG++E A VF + R+ VSW +I G+ K G A++A+
Sbjct: 191 SHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMES 250
Query: 344 -------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMD 396
+T +G++S+CS G ++ G++F+E + +N G++ I ++D+FS+ G +
Sbjct: 251 EGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN-GLRMTIPLVNALMDMFSKCGDIH 309
Query: 397 EAFSLVQNMPMKPNDAVLGSLLLG---CRIHNNAELASQVAQKLVAEIDPEQAAGYLALV 453
EA + N+ K +++ G C + + V++KL +++ + + A++
Sbjct: 310 EARRIFDNLE-KRTIVSWTTMISGYARCGLLD-------VSRKLFDDMEEKDVVLWNAMI 361
Query: 454 ANVYAAAKRWQDVAAVRQKM 473
AKR QD A+ Q+M
Sbjct: 362 GGS-VQAKRGQDALALFQEM 380
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 124/281 (44%), Gaps = 38/281 (13%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
+++ Y G L + K+F+ E +WN MI G +++ + ++ L+++M T+PD
Sbjct: 329 MISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPD 388
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
E T LS C++ G G +H + NV + T+L+++
Sbjct: 389 EITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDM--------------- 433
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
Y K G+I A +F + RN +++T +I G A +G + A
Sbjct: 434 -------------------YAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTA 474
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
+S FNEM A + D++ + LSAC G ++ G+ S ++ F++ + S+
Sbjct: 475 ISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSI--- 531
Query: 298 LIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAKQG 337
++ + G +EEA + M + W +++ G G
Sbjct: 532 MVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHG 572
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 323 bits (829), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 174/517 (33%), Positives = 293/517 (56%), Gaps = 25/517 (4%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++++ I +G + +++ L+ Y+ + A ++F++ + + N M + R
Sbjct: 257 KVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQG 316
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ ++ M+D PD + +S C++ G+ HG VL +G+ S I
Sbjct: 317 LTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICN 376
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+++Y+ + A +FD M ++VV+WNS++ GYV+ G++D AW+ F+ MP +N
Sbjct: 377 ALIDMYMKCHRQ---DTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKN 433
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRAR-VGLDQVALVAALSACAEIGDLKLGKWIH 276
+VSW T+ISG Q +A+ +F M+ V D V +++ SAC +G L L KWI+
Sbjct: 434 IVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY 493
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
Y+E+N G + + V L L+ M++ CG+ E A +F + R+ +WT+ I A
Sbjct: 494 YYIEKN---GIQ-LDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMA 549
Query: 337 GYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEH 381
G A+ A+ + F+G L+ACSHGG V +G++ F M + G+ P H
Sbjct: 550 GNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVH 609
Query: 382 YGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEI 441
YGCMVDL RAGL++EA L+++MPM+PND + SLL CR+ N E+A+ A+K+ +
Sbjct: 610 YGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQV-L 668
Query: 442 DPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDS 501
PE+ Y+ L++NVYA+A RW D+A VR M + G+RKPPG S +QI G H+F +GD
Sbjct: 669 APERTGSYV-LLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDE 727
Query: 502 TYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++ + I L E++ +A G+ PD+S + + ++E
Sbjct: 728 SHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDE 764
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 194/428 (45%), Gaps = 59/428 (13%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
M++ P+ +++ T+ S L+ T L H + G + KL+A
Sbjct: 13 MVLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVA 72
Query: 61 FYVTSGY---LINAHKVFEKTENPSTA-IWNQMIRGHARSETPEKSVYLYKQMIDKETEP 116
G L A +VFE +E+ T ++N +IRG+A S +++ L+ +M++ P
Sbjct: 73 RSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISP 132
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCA 175
D+YT+ F LS CA+ G Q+HG ++ GY ++F++ +L++ Y ECG + A
Sbjct: 133 DKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFY----AECGELDSA 188
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
R +FD+M R+VVSW S++ GY +R A +F
Sbjct: 189 RKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLF------------------------- 223
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
F +R V + V +V +SACA++ DL+ G+ +++++ N + ++VS
Sbjct: 224 -----FRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI-RNSGIEVNDLMVS-- 275
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------ 343
AL+ MY C I+ A +F + N +M + + +QG +EAL
Sbjct: 276 -ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR 334
Query: 344 ---LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFS 400
++ L +S+CS + G+ + +N G + ++D++ + D AF
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYVLRN-GFESWDNICNALIDMYMKCHRQDTAFR 393
Query: 401 LVQNMPMK 408
+ M K
Sbjct: 394 IFDRMSNK 401
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 323 bits (827), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 190/572 (33%), Positives = 298/572 (52%), Gaps = 66/572 (11%)
Query: 23 IFSLLQIRNT---TKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTE 79
+F L Q+ +T +TL +HS+II+ + + KL+ Y + + +A KVF++
Sbjct: 42 VFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIP 101
Query: 80 NPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
+ I N MIR + + + V ++ M PD YT+ +L C+ G G +
Sbjct: 102 ERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRK 161
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYV 198
+HG G S +F+ L+++Y G+CG + ARL+ D+M R VVSWNSL+ GY
Sbjct: 162 IHGSATKVGLSSTLFVGNGLVSMY----GKCGFLSEARLVLDEMSRRDVVSWNSLVVGYA 217
Query: 199 KRGDIDGAWKI-------------------------------------FDEMPHRNVVSW 221
+ D A ++ F +M +++VSW
Sbjct: 218 QNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSW 277
Query: 222 TTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE 281
MI +N +A+ L++ M D V++ + L AC + L LGK IH Y+E
Sbjct: 278 NVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIER 337
Query: 282 NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMIT--GFAKQGYA 339
+ P L+ L NALI MYA CG +E+A VF M+ R+ VSWT+MI+ GF+ +G
Sbjct: 338 KKLI---PNLL-LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCD 393
Query: 340 QEALLT-------------FLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMV 386
AL + F+ L+ACSH G ++EGR F+ M ++ I PR+EH CMV
Sbjct: 394 AVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMV 453
Query: 387 DLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQA 446
DL RAG + EA+ +Q+M M+PN+ V G+LL CR+H++ ++ A KL ++ PEQ
Sbjct: 454 DLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLF-QLAPEQ- 511
Query: 447 AGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQA 506
+GY L++N+YA A RW++V +R M G++K PG S V++N ++H F+ GD ++ Q+
Sbjct: 512 SGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQS 571
Query: 507 SLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
IY+ L + + + GY PD +EE
Sbjct: 572 DEIYRELDVLVKKMKELGYVPDSESALHDVEE 603
>sp|Q9LXF2|PP385_ARATH Pentatricopeptide repeat-containing protein At5g15300
OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=2
Length = 548
Score = 323 bits (827), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 184/520 (35%), Positives = 282/520 (54%), Gaps = 57/520 (10%)
Query: 19 TTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLL--AFYVTSGYLINAHKVFE 76
T R+ L Q +TL QIH+ +++NG ++ +L+ A G L AHK+F+
Sbjct: 11 TNRRRPKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFD 70
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
+ P +I N ++RG A+S PEK+V LY +M + PD YT++F+L C++
Sbjct: 71 EIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSN 130
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLK 195
G HG+V+ G+ N +++ N ++ CG +G A LFDD V+W+S+
Sbjct: 131 GFAFHGKVVRHGFVLNEYVK----NALILFHANCGDLGIASELFDDSAKAHKVAWSSMTS 186
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQN------------------------ 231
GY KRG ID A ++FDEMP+++ V+W MI+GC +
Sbjct: 187 GYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAM 246
Query: 232 -------GKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFS 284
G ++AL +F EMR A D V +++ LSACA +GDL+ GK +H Y+ E S
Sbjct: 247 ISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETAS 306
Query: 285 VGREP-VLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL 343
V V + NALI MYA CG I+ A VFR ++ R+ +W ++I G A +A+ ++
Sbjct: 307 VSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSI 365
Query: 344 ---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDL 388
+TF+GV+ ACSH G VDEGR++F M + I+P I+HYGCMVD+
Sbjct: 366 EMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDM 425
Query: 389 FSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAG 448
RAG ++EAF V++M ++PN V +LL C+I+ N EL +KL++ E +G
Sbjct: 426 LGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDE--SG 483
Query: 449 YLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
L++N+YA+ +W V VR+ V+KP G S ++
Sbjct: 484 DYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 321 bits (823), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 177/533 (33%), Positives = 299/533 (56%), Gaps = 33/533 (6%)
Query: 26 LLQIRNTTKTLFQIHSQIIINGF---SQKNYILAKLLAFYVTSGYLINAHKVFEKTENPS 82
L+ + + QIH+ I+ + + + KL Y + G + ++ +F +T +P
Sbjct: 35 LIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPD 94
Query: 83 TAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHG 142
++ I + + +++ LY Q++ E P+E+T+S LL C+ + G+ +H
Sbjct: 95 LFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLIHT 150
Query: 143 RVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGD 202
VL G + ++ T L+++Y GG+ V A+ +FD MP RS+VS +++ Y K+G+
Sbjct: 151 HVLKFGLGIDPYVATGLVDVY-AKGGD--VVSAQKVFDRMPERSLVSSTAMITCYAKQGN 207
Query: 203 IDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM-RRARVGLDQVALVAALS 261
++ A +FD M R++VSW MI G AQ+G AL LF ++ + D++ +VAALS
Sbjct: 208 VEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALS 267
Query: 262 ACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRR 321
AC++IG L+ G+WIH +V+ + R + V + LI MY+ CG +EEA VF R+
Sbjct: 268 ACSQIGALETGRWIHVFVKSS----RIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRK 323
Query: 322 NTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQF 365
+ V+W +MI G+A GY+Q+AL +TF+G L AC+H G V+EG +
Sbjct: 324 DIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRI 383
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHN 425
FE M Q +GIKP+IEHYGC+V L RAG + A+ ++NM M + + S+L C++H
Sbjct: 384 FESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHG 443
Query: 426 NAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQS 485
+ L ++A+ L+ + +G L++N+YA+ ++ VA VR M + G+ K PG S
Sbjct: 444 DFVLGKEIAEYLIGL--NIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGIS 501
Query: 486 WVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
++I +H+F AGD + ++ IY L +I+ + GY P+ + + +EE
Sbjct: 502 TIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEE 554
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 157/372 (42%), Gaps = 80/372 (21%)
Query: 24 FSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVF----EKTE 79
FS L +TK+ IH+ ++ G Y+ L+ Y G +++A KVF E++
Sbjct: 133 FSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSL 192
Query: 80 NPSTAI---------------------------WNQMIRGHARSETPEKSVYLYKQMI-D 111
STA+ WN MI G+A+ P ++ L+++++ +
Sbjct: 193 VSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAE 252
Query: 112 KETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG 171
+ +PDE T LS C++ G G +H V +S NV + T L+++Y +CG
Sbjct: 253 GKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMY----SKCG 308
Query: 172 -VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP-----HRNVVSWTTMI 225
+ A L+F+D P + +V+WN+++ GY G A ++F+EM +++ +
Sbjct: 309 SLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTL 368
Query: 226 SGCAQNGKSRQALSLFNEM--------------------------RRA-------RVGLD 252
CA G + + +F M +RA + D
Sbjct: 369 QACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDAD 428
Query: 253 QVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAY 312
V + L +C GD LGK I Y+ ++ + V L+N +YAS G+ E
Sbjct: 429 SVLWSSVLGSCKLHGDFVLGKEIAEYL-IGLNIKNSGIYVLLSN----IYASVGDYEGVA 483
Query: 313 GVFRKMQRRNTV 324
V M+ + V
Sbjct: 484 KVRNLMKEKGIV 495
>sp|Q9FIF7|PP435_ARATH Putative pentatricopeptide repeat-containing protein At5g59200,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3
SV=1
Length = 544
Score = 319 bits (817), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 167/524 (31%), Positives = 293/524 (55%), Gaps = 29/524 (5%)
Query: 10 NPATSSKALTTRQ-IFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYL 68
+P +++ L+ R+ + S+L+ + IH++II Q +++ +L+ T +
Sbjct: 18 DPDSNTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSV 77
Query: 69 INAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVC 128
A+ VF NP+ ++ MI G S V LY +MI PD Y + +L C
Sbjct: 78 DYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC 137
Query: 129 ARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVV 188
+ ++H +VL G+ S+ + +M +Y SG A+ +FD+MP R V
Sbjct: 138 D----LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVN---AKKMFDEMPDRDHV 190
Query: 189 SWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRAR 248
+ ++ Y + G I A ++F ++ ++ V WT MI G +N + +AL LF EM+
Sbjct: 191 AATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMEN 250
Query: 249 VGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEI 308
V ++ V LSAC+++G L+LG+W+HS+VE R + + NALI+MY+ CG+I
Sbjct: 251 VSANEFTAVCVLSACSDLGALELGRWVHSFVENQ----RMELSNFVGNALINMYSRCGDI 306
Query: 309 EEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSAC 353
EA VFR M+ ++ +S+ +MI+G A G + EA+ +T + +L+AC
Sbjct: 307 NEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNAC 366
Query: 354 SHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAV 413
SHGG +D G + F M + + ++P+IEHYGC+VDL R G ++EA+ ++N+P++P+ +
Sbjct: 367 SHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIM 426
Query: 414 LGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKM 473
LG+LL C+IH N EL ++A++L +P+ +G L++N+YA++ +W++ +R+ M
Sbjct: 427 LGTLLSACKIHGNMELGEKIAKRLFESENPD--SGTYVLLSNLYASSGKWKESTEIRESM 484
Query: 474 IKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEIT 517
G+ K PG S ++++ +H+F+ GD + IY+ L E+
Sbjct: 485 RDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELN 528
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 318 bits (815), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 186/541 (34%), Positives = 291/541 (53%), Gaps = 64/541 (11%)
Query: 18 LTTRQIFSLLQIRNTT-KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFE 76
LT + + LL+ ++ K L +IH+ ++ GFS+KN +L +LL V G + A +VF+
Sbjct: 8 LTKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFD 67
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
+ P +WN + +G+ R++ P +S+ LYK+M D PDE+TY F++ ++ G F
Sbjct: 68 EMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSC 127
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKG 196
G +H V+ G+ + T L+ +Y M GE + A LF+ M + +V+WN+ L
Sbjct: 128 GFALHAHVVKYGFGCLGIVATELVMMY-MKFGE--LSSAEFLFESMQVKDLVAWNAFL-- 182
Query: 197 YVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVAL 256
+ C Q G S AL FN+M V D +
Sbjct: 183 -----------------------------AVCVQTGNSAIALEYFNKMCADAVQFDSFTV 213
Query: 257 VAALSACAEIGDLKLGKWIHSYVEENFSVGREPVL---VSLNNALIHMYASCGEIEEAYG 313
V+ LSAC ++G L++G EE + R+ + + + NA + M+ CG E A
Sbjct: 214 VSMLSACGQLGSLEIG-------EEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARV 266
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGF 358
+F +M++RN VSW++MI G+A G ++EAL +TFLGVLSACSH G
Sbjct: 267 LFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGL 326
Query: 359 VDEGRQFFECMNQ--NWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGS 416
V+EG+++F M Q + ++PR EHY CMVDL R+GL++EA+ ++ MP++P+ + G+
Sbjct: 327 VNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGA 386
Query: 417 LLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKM 476
LL C +H + L +VA LV E P+ Y L++N+YAAA +W V VR KM K+
Sbjct: 387 LLGACAVHRDMILGQKVADVLV-ETAPD-IGSYHVLLSNIYAAAGKWDCVDKVRSKMRKL 444
Query: 477 GVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGI 536
G +K S V+ G +H F GD ++ Q+ IY+ L EI + + GY PD +F +
Sbjct: 445 GTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDV 504
Query: 537 E 537
E
Sbjct: 505 E 505
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 315 bits (808), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 170/480 (35%), Positives = 277/480 (57%), Gaps = 36/480 (7%)
Query: 85 IWNQMIRGHARS-ETPEK--SVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVH 141
+WN +IR + +P++ + +Y +M + PD +T+ FLL G++ H
Sbjct: 26 LWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTH 85
Query: 142 GRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKR 200
++L G + F+RT+L+N+Y CG + A+ +FDD ++ + +WNS++ Y K
Sbjct: 86 AQILLFGLDKDPFVRTSLLNMY----SSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKA 141
Query: 201 GDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR-----RARVGLDQVA 255
G ID A K+FDEMP RNV+SW+ +I+G GK ++AL LF EM+ A V ++
Sbjct: 142 GLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFT 201
Query: 256 LVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVF 315
+ LSAC +G L+ GKW+H+Y+++ + V + + L ALI MYA CG +E A VF
Sbjct: 202 MSTVLSACGRLGALEQGKWVHAYIDK-YHV---EIDIVLGTALIDMYAKCGSLERAKRVF 257
Query: 316 RKM-QRRNTVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGF 358
+ +++ ++++MI A G E +TF+G+L AC H G
Sbjct: 258 NALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGL 317
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLL 418
++EG+ +F+ M + +GI P I+HYGCMVDL+ R+GL+ EA S + +MPM+P+ + GSLL
Sbjct: 318 INEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLL 377
Query: 419 LGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
G R+ + + ++L+ E+DP + Y+ L++NVYA RW +V +R +M G+
Sbjct: 378 SGSRMLGDIKTCEGALKRLI-ELDPMNSGAYV-LLSNVYAKTGRWMEVKCIRHEMEVKGI 435
Query: 479 RKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
K PG S+V++ GV+H+FV GD + +++ IY L EI + + GY D E+ L + E
Sbjct: 436 NKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNE 495
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 135/334 (40%), Gaps = 76/334 (22%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARS- 96
+ H+QI++ G + ++ LL Y + G L +A +VF+ + + WN ++ +A++
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 97 ----------ETPEKSV---------YL----YKQMIDKETE------------PDEYTY 121
E PE++V Y+ YK+ +D E P+E+T
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDD 181
S +LS C R G +G+ VH Y + +
Sbjct: 203 STVLSACGRLGALEQGKWVH------AYIDKYHVEID----------------------- 233
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM-PHRNVVSWTTMISGCAQNGKSRQALSL 240
+V +L+ Y K G ++ A ++F+ + ++V +++ MI A G + + L
Sbjct: 234 -----IVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQL 288
Query: 241 FNEMRRA-RVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
F+EM + + + V V L AC G + GK + E F + + ++
Sbjct: 289 FSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPS---IQHYGCMV 345
Query: 300 HMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITG 332
+Y G I+EA M + + W S+++G
Sbjct: 346 DLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
>sp|O80488|PPR23_ARATH Pentatricopeptide repeat-containing protein At1g09190
OS=Arabidopsis thaliana GN=PCMP-E70 PE=2 SV=1
Length = 484
Score = 313 bits (801), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 181/486 (37%), Positives = 274/486 (56%), Gaps = 30/486 (6%)
Query: 21 RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLIN---AHKVFEK 77
R++ LL NT L +IH+ ++ + N +LA F G L N A++VF
Sbjct: 5 RKLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAH---FISICGSLSNSDYANRVFSH 61
Query: 78 TENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+NP+ ++N MI+ ++ P +S+ + M + DEYTY+ LL C+ R G
Sbjct: 62 IQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFG 121
Query: 138 EQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGY 197
+ VHG ++ +G+ IR ++ LY SGG +G A+ +FD+M R+VV WN +++G+
Sbjct: 122 KCVHGELIRTGFHRLGKIRIGVVELY-TSGGR--MGDAQKVFDEMSERNVVVWNLMIRGF 178
Query: 198 VKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
GD++ +F +M R++VSW +MIS ++ G+ R+AL LF EM D+ +V
Sbjct: 179 CDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVV 238
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
L A +G L GKWIHS E S G +++ NAL+ Y G++E A +FRK
Sbjct: 239 TVLPISASLGVLDTGKWIHSTAE---SSGLFKDFITVGNALVDFYCKSGDLEAATAIFRK 295
Query: 318 MQRRNTVSWTSMITGFAKQGYAQ------EALL----------TFLGVLSACSHGGFVDE 361
MQRRN VSW ++I+G A G + +A++ TFLGVL+ CS+ G V+
Sbjct: 296 MQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVER 355
Query: 362 GRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGC 421
G + F M + + ++ R EHYG MVDL SR+G + EAF ++NMP+ N A+ GSLL C
Sbjct: 356 GEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSAC 415
Query: 422 RIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKP 481
R H + +LA A +LV +I+P + Y+ L++N+YA RWQDV VR M K +RK
Sbjct: 416 RSHGDVKLAEVAAMELV-KIEPGNSGNYV-LLSNLYAEEGRWQDVEKVRTLMKKNRLRKS 473
Query: 482 PGQSWV 487
GQS +
Sbjct: 474 TGQSTI 479
>sp|Q9MA50|PPR13_ARATH Pentatricopeptide repeat-containing protein At1g05750,
chloroplastic OS=Arabidopsis thaliana GN=PDE247 PE=2
SV=1
Length = 500
Score = 311 bits (798), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 170/470 (36%), Positives = 272/470 (57%), Gaps = 34/470 (7%)
Query: 77 KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE 136
++ + +T W I R+ ++ + M EP+ T+ LLS CG F
Sbjct: 30 QSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLS---GCGDFTS 86
Query: 137 GEQVHGRVLASGYC------SNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSW 190
G + G +L C ++V + T ++ +Y G ARL+FD M ++ V+W
Sbjct: 87 GSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGR---FKKARLVFDYMEDKNSVTW 143
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG 250
N+++ GY++ G +D A K+FD+MP R+++SWT MI+G + G +AL F EM+ + V
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYV-EENFSVGREPVLVSLNNALIHMYASCGEIE 309
D VA++AAL+AC +G L G W+H YV ++F V ++N+LI +Y CG +E
Sbjct: 204 PDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNN-----VRVSNSLIDLYCRCGCVE 258
Query: 310 EAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALL---------------TFLGVLSACS 354
A VF M++R VSW S+I GFA G A E+L+ TF G L+ACS
Sbjct: 259 FARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACS 318
Query: 355 HGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVL 414
H G V+EG ++F+ M ++ I PRIEHYGC+VDL+SRAG +++A LVQ+MPMKPN+ V+
Sbjct: 319 HVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVI 378
Query: 415 GSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMI 474
GSLL C H N + ++ K + +++ + + Y+ L +N+YAA +W+ + +R+KM
Sbjct: 379 GSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVIL-SNMYAADGKWEGASKMRRKMK 437
Query: 475 KMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEG 524
+G++K PG S ++I+ +H F+AGD+ + + + I + L I+ +G
Sbjct: 438 GLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQG 487
Score = 92.4 bits (228), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 141/327 (43%), Gaps = 48/327 (14%)
Query: 41 SQIIINGFSQKNYIL-AKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETP 99
++++ + KN + ++ Y+ SG + NA K+F+K W MI G +
Sbjct: 128 ARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQ 187
Query: 100 EKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNL 159
E+++ +++M +PD L+ C G G VH VL+ + +NV + +L
Sbjct: 188 EEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSL 247
Query: 160 MNLYLMSGGECGVGC---ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHR 216
++LY C GC AR +F +M R+VVSWNS++ G+
Sbjct: 248 IDLY------CRCGCVEFARQVFYNMEKRTVVSWNSVIVGF------------------- 282
Query: 217 NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIH 276
A NG + ++L F +M+ D V AL+AC+ +G ++ G
Sbjct: 283 ------------AANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYF 330
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAK 335
++ ++ + + L+ +Y+ G +E+A + + M + N V S++ +
Sbjct: 331 QIMKCDYRISPR---IEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSN 387
Query: 336 QG---YAQEALLTFLGVLSACSHGGFV 359
G E L+ L L+ SH +V
Sbjct: 388 HGNNIVLAERLMKHLTDLNVKSHSNYV 414
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+H ++ F + L+ Y G + A +VF E + WN +I G A +
Sbjct: 228 VHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGN 287
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
+S+ +++M +K +PD T++ L+ C+ GL EG
Sbjct: 288 AHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG 326
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 311 bits (796), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 179/589 (30%), Positives = 305/589 (51%), Gaps = 90/589 (15%)
Query: 11 PATSSKALTTRQIF-----SLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS 65
P + +++R+IF L + N + + Q+H+QII + +I KL++
Sbjct: 6 PVRAPSWVSSRRIFEERLQDLPKCANLNQ-VKQLHAQIIRRNLHEDLHIAPKLISALSLC 64
Query: 66 GYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
A +VF + + P+ + N +IR HA++ P ++ +++ +M D +TY FLL
Sbjct: 65 RQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLL 124
Query: 126 SVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYL--------------------- 164
C+ + +H + G S++++ L++ Y
Sbjct: 125 KACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERD 184
Query: 165 ------MSGGECGVG---CARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPH 215
M GG G AR LFD+MP R ++SWN++L GY + ++ A+++F++MP
Sbjct: 185 TVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPE 244
Query: 216 RNVVSWTTM---------------------------------ISGCAQNGKSRQALSLFN 242
RN VSW+TM I+G A+ G ++A L +
Sbjct: 245 RNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVD 304
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMY 302
+M + + D A+++ L+AC E G L LG IHS ++ + ++G ++ NAL+ MY
Sbjct: 305 QMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRS-NLGSNAYVL---NALLDMY 360
Query: 303 ASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFL 347
A CG +++A+ VF + +++ VSW +M+ G G+ +EA+ +TF+
Sbjct: 361 AKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFI 420
Query: 348 GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM 407
VL +C+H G +DEG +F M + + + P++EHYGC+VDL R G + EA +VQ MPM
Sbjct: 421 AVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPM 480
Query: 408 KPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVA 467
+PN + G+LL CR+HN ++A +V LV ++DP Y +L++N+YAAA+ W+ VA
Sbjct: 481 EPNVVIWGALLGACRMHNEVDIAKEVLDNLV-KLDPCDPGNY-SLLSNIYAAAEDWEGVA 538
Query: 468 AVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEI 516
+R KM MGV KP G S V++ +H+F D ++ ++ IY+ LG +
Sbjct: 539 DIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 310 bits (795), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 176/509 (34%), Positives = 286/509 (56%), Gaps = 37/509 (7%)
Query: 49 SQKNYILAK---LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYL 105
S++N+ L LL +V ++ A + F+ WN +I G+A+S +++
Sbjct: 213 SRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEA--- 269
Query: 106 YKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLM 165
+Q+ D+ D +T++ ++S + + E ++ ++ S N M +
Sbjct: 270 -RQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVS-----WNAMLAGYV 323
Query: 166 SGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMI 225
G + A+ LFD MP R+V +WN+++ GY + G I A +FD+MP R+ VSW MI
Sbjct: 324 QGERMEM--AKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMI 381
Query: 226 SGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS-YVEENFS 284
+G +Q+G S +AL LF +M R L++ + +ALS CA++ L+LGK +H V+ +
Sbjct: 382 AGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYE 441
Query: 285 VGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL- 343
G + NAL+ MY CG IEEA +F++M ++ VSW +MI G+++ G+ + AL
Sbjct: 442 TG-----CFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALR 496
Query: 344 --------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLF 389
T + VLSACSH G VD+GRQ+F M Q++G+ P +HY CMVDL
Sbjct: 497 FFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLL 556
Query: 390 SRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGY 449
RAGL+++A +L++NMP +P+ A+ G+LL R+H N ELA A K+ A ++PE + Y
Sbjct: 557 GRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFA-MEPENSGMY 615
Query: 450 LALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLI 509
+ L++N+YA++ RW DV +R +M GV+K PG SW++I H F GD + + I
Sbjct: 616 V-LLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEI 674
Query: 510 YKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ L E+ ++ + GY S + +EE
Sbjct: 675 FAFLEELDLRMKKAGYVSKTSVVLHDVEE 703
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 192/443 (43%), Gaps = 107/443 (24%)
Query: 63 VTSGYLIN-----AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
+ SGYL N A K+F++ WN MI+G+ R+ K+ L++ M E D
Sbjct: 101 MISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIM----PERD 156
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRV----------LASGYCSNVFIRTNLM------N 161
+++ +LS A+ G + V R+ L S Y N + M N
Sbjct: 157 VCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSREN 216
Query: 162 LYLMSGGECGVGC---------ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDE 212
L+S C +G AR FD M R VVSWN+++ GY + G ID A ++FDE
Sbjct: 217 WALVSWN-CLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE 275
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLG 272
P ++V +WT M+SG QN +A LF++M ++V+ A L+ + +++
Sbjct: 276 SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMA 331
Query: 273 KWIHSYVEENFSVGREPVL-VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMIT 331
K E F V P VS N +I YA CG+I EA +F KM +R+ VSW +MI
Sbjct: 332 K-------ELFDV--MPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIA 382
Query: 332 GFAKQGYAQEALLTFL---------------GVLSACS-----------HG--------- 356
G+++ G++ EAL F+ LS C+ HG
Sbjct: 383 GYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET 442
Query: 357 ---------------GFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSL 401
G ++E F+ M I + M+ +SR G + A
Sbjct: 443 GCFVGNALLLMYCKCGSIEEANDLFKEM-----AGKDIVSWNTMIAGYSRHGFGEVALRF 497
Query: 402 VQNMP---MKPNDAVLGSLLLGC 421
++M +KP+DA + ++L C
Sbjct: 498 FESMKREGLKPDDATMVAVLSAC 520
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 159/361 (44%), Gaps = 70/361 (19%)
Query: 59 LAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDE 118
++ Y+ +G A +VF++ S+ +N MI G+ R+ E L +++ D+ E D
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFE----LARKLFDEMPERDL 126
Query: 119 YTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLL 178
+++ V+ GY N +G AR L
Sbjct: 127 VSWN---------------------VMIKGYVRNR-----------------NLGKAREL 148
Query: 179 FDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQAL 238
F+ MP R V SWN++L GY + G +D A +FD MP +N VSW ++S QN K +A
Sbjct: 149 FEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEAC 208
Query: 239 SLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNAL 298
LF + ALV+ C G +K K + + + F +VS N +
Sbjct: 209 MLFKSR-------ENWALVSW--NCLLGGFVKKKKIVEA--RQFFDSMNVRDVVSW-NTI 256
Query: 299 IHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-----------LTFL 347
I YA G+I+EA +F + ++ +WT+M++G+ + +EA +++
Sbjct: 257 ITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWN 316
Query: 348 GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM 407
+L+ G ++ ++ F+ M + + M+ +++ G + EA +L MP
Sbjct: 317 AMLAGYVQGERMEMAKELFDVMPCR-----NVSTWNTMITGYAQCGKISEAKNLFDKMPK 371
Query: 408 K 408
+
Sbjct: 372 R 372
Score = 82.4 bits (202), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 28/234 (11%)
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
+ WN + Y++ G + A ++F MP + VS+ MISG +NG+ A LF+EM
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 246 RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASC 305
D V+ + + + LGK E F + E + S N ++ YA
Sbjct: 123 ER----DLVSWNVMIK--GYVRNRNLGK-----ARELFEIMPERDVCSW-NTMLSGYAQN 170
Query: 306 GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLG------VLSACSHGGFV 359
G +++A VF +M +N VSW ++++ + + +EA + F V C GGFV
Sbjct: 171 GCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFV 230
Query: 360 D-----EGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
E RQFF+ MN + + ++ ++++G +DEA L P++
Sbjct: 231 KKKKIVEARQFFDSMNVR-----DVVSWNTIITGYAQSGKIDEARQLFDESPVQ 279
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 51/102 (50%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H +++ G+ ++ LL Y G + A+ +F++ WN MI G++R
Sbjct: 430 QLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHG 489
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
E ++ ++ M + +PD+ T +LS C+ GL +G Q
Sbjct: 490 FGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 531
>sp|Q9LXE8|PP386_ARATH Pentatricopeptide repeat-containing protein At5g15340,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H91 PE=2
SV=1
Length = 623
Score = 309 bits (791), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 176/518 (33%), Positives = 287/518 (55%), Gaps = 30/518 (5%)
Query: 38 QIHSQIIINGFSQ--KNYILAKLLAFYVTSGYLINAHKVFEKT--ENPSTAIWNQMIRGH 93
++H+ + +G + ++Y+ L FY +SG ++ A K+F++ W ++
Sbjct: 27 ELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSF 86
Query: 94 ARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNV 153
+R S+ L+ +M K E D+ + L VCA+ +Q HG + G ++V
Sbjct: 87 SRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSV 146
Query: 154 FIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDE 212
+ LM++Y G+CG V + +F+++ +SVVSW +L VK ++ ++F E
Sbjct: 147 KVCNALMDMY----GKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHE 202
Query: 213 MPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR-RARVGLDQVALVAALSACAEIGDLKL 271
MP RN V+WT M++G G +R+ L L EM R GL+ V L + LSACA+ G+L +
Sbjct: 203 MPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVV 262
Query: 272 GKWIHSY-VEENFSVGREPVL--VSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTS 328
G+W+H Y +++ +G E V + AL+ MYA CG I+ + VFR M++RN V+W +
Sbjct: 263 GRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNA 322
Query: 329 MITGFAKQGYAQEAL--------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWG 374
+ +G A G + + LTF VLSACSH G VDEG + F + + +G
Sbjct: 323 LFSGLAMHGKGRMVIDMFPQMIREVKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYG 381
Query: 375 IKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVA 434
++P+++HY CMVDL RAGL++EA L++ MP+ PN+ VLGSLL C +H E+A ++
Sbjct: 382 LEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIK 441
Query: 435 QKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLH 494
++L+ ++ P Y L++N+Y A R +R + K G+RK PG S + +N +H
Sbjct: 442 RELI-QMSPGNTE-YQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVH 499
Query: 495 DFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISEL 532
F +GD ++ + IY L E+ + GY PD+S L
Sbjct: 500 RFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGL 537
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 151/380 (39%), Gaps = 96/380 (25%)
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDM 182
LL CA R G+++H + SG
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGL-------------------------------KK 39
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP--HRNVVSWTTMISGCAQNGKSRQALSL 240
RS +S N+L + Y G++ A K+FDE+P ++ V WTT++S ++ G ++ L
Sbjct: 40 APRSYLS-NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKL 98
Query: 241 FNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN--NAL 298
F EMRR RV +D V++V CA++ DL + H + VL S+ NAL
Sbjct: 99 FVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAV------KMGVLTSVKVCNAL 152
Query: 299 IHMYASCG----------EIEE---------------------AYGVFRKMQRRNTVSWT 327
+ MY CG E+EE VF +M RN V+WT
Sbjct: 153 MDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWT 212
Query: 328 SMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFF----- 366
M+ G+ G+ +E L +T +LSAC+ G + GR
Sbjct: 213 VMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALK 272
Query: 367 -ECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHN 425
E M + +VD++++ G +D + ++ + M K N +L G +H
Sbjct: 273 KEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLM-RKRNVVTWNALFSGLAMHG 331
Query: 426 NAELASQVAQKLVAEIDPEQ 445
+ + +++ E+ P+
Sbjct: 332 KGRMVIDMFPQMIREVKPDD 351
>sp|Q9SJG6|PP200_ARATH Pentatricopeptide repeat-containing protein At2g42920,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2
SV=1
Length = 559
Score = 308 bits (788), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 177/526 (33%), Positives = 289/526 (54%), Gaps = 30/526 (5%)
Query: 7 IPANPATSSKALTTRQIFSLLQIR-NTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS 65
+PA P SS +L+ L+ + +T + L QIH+ +I G +++LAF S
Sbjct: 13 VPAMP--SSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCAS 70
Query: 66 GYLIN-AHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMI--DKETEPDEYTYS 122
+N A+ VF + + + +WN +IRG +RS PE ++ ++ M+ +P TY
Sbjct: 71 PSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYP 130
Query: 123 FLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDM 182
+ R G R+G Q+HG V+ G + FIR ++++Y+ G C + R+ F M
Sbjct: 131 SVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCG--CLIEAWRI-FLGM 187
Query: 183 PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFN 242
VV+WNS++ G+ K G ID A +FDEMP RN VSW +MISG +NG+ + AL +F
Sbjct: 188 IGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFR 247
Query: 243 EMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMY 302
EM+ V D +V+ L+ACA +G + G+WIH Y+ N R + + ALI MY
Sbjct: 248 EMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRN----RFELNSIVVTALIDMY 303
Query: 303 ASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFL 347
CG IEE VF ++ W SMI G A G+ + A+ ++F+
Sbjct: 304 CKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFI 363
Query: 348 GVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPM 407
GVL+AC+H G V +FF M + + I+P I+HY MV++ AGL++EA +L++NMP+
Sbjct: 364 GVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPV 423
Query: 408 KPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVA 467
+ + + SLL CR N E+A + A K + ++DP++ GY+ L++N YA+ +++
Sbjct: 424 EEDTVIWSSLLSACRKIGNVEMAKRAA-KCLKKLDPDETCGYV-LLSNAYASYGLFEEAV 481
Query: 468 AVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTL 513
R M + + K G S ++++ +H+F++ T+ +++ IY L
Sbjct: 482 EQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLL 527
>sp|Q9FNN7|PP371_ARATH Pentatricopeptide repeat-containing protein At5g08510
OS=Arabidopsis thaliana GN=PCMP-E20 PE=2 SV=1
Length = 511
Score = 305 bits (780), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 169/497 (34%), Positives = 275/497 (55%), Gaps = 31/497 (6%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q+H+ + G + +L +LL L+ A K+F+ +N T ++N++I+ +
Sbjct: 6 QLHAHCLRTGVDETKDLLQRLLLI----PNLVYARKLFDHHQNSCTFLYNKLIQAYYVHH 61
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
P +S+ LY + P +T++F+ + A R +H + SG+ S+ F T
Sbjct: 62 QPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCT 121
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
L+ Y G C CAR +FD+M R V WN+++ GY +RGD+ A ++FD MP +N
Sbjct: 122 TLITAYAKLGALC---CARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKN 178
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRAR-VGLDQVALVAALSACAEIGDLKLGKWIH 276
V SWTT+ISG +QNG +AL +F M + + V + + +V+ L ACA +G+L++G+ +
Sbjct: 179 VTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLE 238
Query: 277 SYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAK 335
Y EN + + NA I MY+ CG I+ A +F ++ +RN SW SMI A
Sbjct: 239 GYARENGFFDN----IYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLAT 294
Query: 336 QGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIE 380
G EAL +TF+G+L AC HGG V +G++ F+ M + I P++E
Sbjct: 295 HGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLE 354
Query: 381 HYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAE 440
HYGCM+DL R G + EA+ L++ MPMKP+ V G+LL C H N E+A ++A + + +
Sbjct: 355 HYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA-EIASEALFK 413
Query: 441 IDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSW-VQINGVLHDFVAG 499
++P G +++N+YAA ++W V +R+ M K + K G S+ V++ +H F
Sbjct: 414 LEPTN-PGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVE 472
Query: 500 DSTYKQASLIYKTLGEI 516
D ++ ++ IY+ L EI
Sbjct: 473 DKSHPRSYEIYQVLEEI 489
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 136/344 (39%), Gaps = 73/344 (21%)
Query: 34 KTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGH 93
+ L +HSQ +GF ++ L+ Y G L A +VF++ +WN MI G+
Sbjct: 99 RPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGY 158
Query: 94 AR-----------SETPEKSVYLYKQMI---------------------DKETEPDEYTY 121
R P K+V + +I DK +P+ T
Sbjct: 159 QRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITV 218
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCARLLFD 180
+L CA G G ++ G +G+ N+++ + +Y +CG + A+ LF+
Sbjct: 219 VSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMY----SKCGMIDVAKRLFE 274
Query: 181 DM-PARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
++ R++ SWNS MI A +GK +AL+
Sbjct: 275 ELGNQRNLCSWNS-------------------------------MIGSLATHGKHDEALT 303
Query: 240 LFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
LF +M R D V V L AC G + G+ + +EE + P L +I
Sbjct: 304 LFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKIS--PKLEHY-GCMI 360
Query: 300 HMYASCGEIEEAYGVFRKM-QRRNTVSWTSMITGFAKQGYAQEA 342
+ G+++EAY + + M + + V W +++ + G + A
Sbjct: 361 DLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA 404
>sp|Q9LXY5|PP284_ARATH Pentatricopeptide repeat-containing protein At3g56550
OS=Arabidopsis thaliana GN=PCMP-H80 PE=2 SV=1
Length = 581
Score = 304 bits (778), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 177/529 (33%), Positives = 276/529 (52%), Gaps = 59/529 (11%)
Query: 21 RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS--GYLINAHKVFEKT 78
R I +LQ N+ K L +IHS +IING I LL F S G L +A +F+
Sbjct: 6 RVIVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHF 65
Query: 79 E-NPSTAIWNQMIRGHARSETPEKSVYLYKQMI-DKETEPDEYTYSFLLSVCARCGLFRE 136
+ +PST+ WN +IRG + S +P S+ Y +M+ + PD +T++F L C R +
Sbjct: 66 DSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPK 125
Query: 137 GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKG 196
++HG V+ SG+ + + T SL++
Sbjct: 126 CLEIHGSVIRSGFLDDAIVAT----------------------------------SLVRC 151
Query: 197 YVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVAL 256
Y G ++ A K+FDEMP R++VSW MI + G QALS++ M V D L
Sbjct: 152 YSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTL 211
Query: 257 VAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFR 316
VA LS+CA + L +G +H + R V ++NALI MYA CG +E A GVF
Sbjct: 212 VALLSSCAHVSALNMGVMLHRIACDI----RCESCVFVSNALIDMYAKCGSLENAIGVFN 267
Query: 317 KMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDE 361
M++R+ ++W SMI G+ G+ EA+ +TFLG+L CSH G V E
Sbjct: 268 GMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKE 327
Query: 362 GRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGC 421
G + FE M+ + + P ++HYGCMVDL+ RAG ++ + ++ + + +LL C
Sbjct: 328 GVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSC 387
Query: 422 RIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKP 481
+IH N EL +VA K + +++ A Y+ L+ ++Y+AA Q A++R+ + ++
Sbjct: 388 KIHRNLELG-EVAMKKLVQLEAFNAGDYV-LMTSIYSAANDAQAFASMRKLIRSHDLQTV 445
Query: 482 PGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
PG SW++I +H FV D + ++++IY LGE+ +A+ GYKP+ S
Sbjct: 446 PGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPEDS 494
>sp|Q9C501|PPR70_ARATH Pentatricopeptide repeat-containing protein At1g33350
OS=Arabidopsis thaliana GN=PCMP-E57 PE=2 SV=1
Length = 538
Score = 303 bits (776), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 167/505 (33%), Positives = 277/505 (54%), Gaps = 33/505 (6%)
Query: 36 LFQIHSQIIINGFSQKNYILAKLLAF-YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHA 94
L Q+ S +I++G S +++ KLL F + L A +F++ P+T ++ ++ ++
Sbjct: 40 LKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAYS 99
Query: 95 RSETPEKS--VYLYKQMIDKET-EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCS 151
S S ++ M+++ P+ + Y +L VH + SG+
Sbjct: 100 SSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHL 159
Query: 152 NVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFD 211
V ++T L++ Y S + AR LFD+M R+VVSW ++L GY + GDI A +F+
Sbjct: 160 YVVVQTALLHSYASSVSH--ITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFE 217
Query: 212 EMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM-RRARVGLDQVALVAALSACAEIGDLK 270
+MP R+V SW +++ C QNG +A+SLF M + ++V +V LSACA+ G L+
Sbjct: 218 DMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQ 277
Query: 271 LGKWIHSYV-EENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSM 329
L K IH++ + S V ++N+L+ +Y CG +EEA VF+ +++ +W SM
Sbjct: 278 LAKGIHAFAYRRDLSSD-----VFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSM 332
Query: 330 ITGFAKQGYAQEAL------------------LTFLGVLSACSHGGFVDEGRQFFECMNQ 371
I FA G ++EA+ +TF+G+L+AC+HGG V +GR +F+ M
Sbjct: 333 INCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTN 392
Query: 372 NWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELAS 431
+GI+PRIEHYGC++DL RAG DEA ++ M MK ++A+ GSLL C+IH + +LA
Sbjct: 393 RFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAE 452
Query: 432 QVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQING 491
+ LVA ++P GY+A++AN+Y W++ R+ + KPPG S ++I+
Sbjct: 453 VAVKNLVA-LNPNN-GGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDN 510
Query: 492 VLHDFVAGDSTYKQASLIYKTLGEI 516
+H F + D ++ + IY L +
Sbjct: 511 EVHQFYSLDKSHPETEEIYMILDSL 535
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 303 bits (776), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 167/527 (31%), Positives = 278/527 (52%), Gaps = 60/527 (11%)
Query: 30 RNTTKTL-FQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQ 88
R +++ L +HS ++ GF+ + LL+ Y SG L +AHK+F++ + S W
Sbjct: 123 RASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTA 182
Query: 89 MIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASG 148
+ G+ S +++ L+K+M++ +PD Y +LS C G GE + +
Sbjct: 183 LFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEME 242
Query: 149 YCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWK 208
N F+RT L+NLY K G ++ A
Sbjct: 243 MQKNSFVRTTLVNLY----------------------------------AKCGKMEKARS 268
Query: 209 IFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGD 268
+FD M +++V+W+TMI G A N ++ + LF +M + + DQ ++V LS+CA +G
Sbjct: 269 VFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGA 328
Query: 269 LKLGKWIHSYVEENFSVGREPVLVSL--NNALIHMYASCGEIEEAYGVFRKMQRRNTVSW 326
L LG+W S ++ R L +L NALI MYA CG + + VF++M+ ++ V
Sbjct: 329 LDLGEWGISLID------RHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIM 382
Query: 327 TSMITGFAKQGYAQEALL---------------TFLGVLSACSHGGFVDEGRQFFECMNQ 371
+ I+G AK G+ + + TFLG+L C H G + +G +FF ++
Sbjct: 383 NAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISC 442
Query: 372 NWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELAS 431
+ +K +EHYGCMVDL+ RAG++D+A+ L+ +MPM+PN V G+LL GCR+ + +LA
Sbjct: 443 VYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAE 502
Query: 432 QVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQING 491
V ++L+A ++P A Y+ L +N+Y+ RW + A VR M K G++K PG SW+++ G
Sbjct: 503 TVLKELIA-LEPWNAGNYVQL-SNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEG 560
Query: 492 VLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+H+F+A D ++ + IY L ++ + G+ P +F +EE
Sbjct: 561 KVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEE 607
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 128/287 (44%), Gaps = 26/287 (9%)
Query: 191 NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG 250
N LLK + ++ +F N+ + ++I+G N + L LF +R+ +
Sbjct: 49 NLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLY 108
Query: 251 LDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEE 310
L L AC KLG +HS V G + ++ +L+ +Y+ G + +
Sbjct: 109 LHGFTFPLVLKACTRASSRKLGIDLHSLV---VKCGFNHDVAAM-TSLLSIYSGSGRLND 164
Query: 311 AYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF---------------LGVLSACSH 355
A+ +F ++ R+ V+WT++ +G+ G +EA+ F + VLSAC H
Sbjct: 165 AHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVH 224
Query: 356 GGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLG 415
G +D G + M + K +V+L+++ G M++A S+ +M K D V
Sbjct: 225 VGDLDSGEWIVKYMEEMEMQKNSFVR-TTLVNLYAKCGKMEKARSVFDSMVEK--DIVTW 281
Query: 416 SLLLGCRIHNN--AELASQVAQKLVAEIDPEQAA--GYLALVANVYA 458
S ++ N+ E Q L + P+Q + G+L+ A++ A
Sbjct: 282 STMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGA 328
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 301 bits (772), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 166/529 (31%), Positives = 298/529 (56%), Gaps = 29/529 (5%)
Query: 30 RNTTKTLFQ-IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQ 88
RN T T + +H+ I+ G Q + L+ Y G +A +VF++ + W
Sbjct: 15 RNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWAS 74
Query: 89 MIRGHARSETPEKSVYLYKQMIDKET-EPDEYTYSFLLSVCARCGLFREGEQVHGRVLAS 147
++ ++ K++ ++ + PD++ +S L+ CA G G QVH + S
Sbjct: 75 VLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVS 134
Query: 148 GYCSNVFIRTNLMNLYLMSGGECGV-GCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGA 206
Y ++ ++++L+++Y +CG+ A+ +FD + ++ +SW +++ GY K G + A
Sbjct: 135 EYANDEVVKSSLVDMY----AKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEA 190
Query: 207 WKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVG-LDQVALVAALSACAE 265
++F +P +N+ SWT +ISG Q+GK +A S+F EMRR RV LD + L + + ACA
Sbjct: 191 LELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACAN 250
Query: 266 IGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVS 325
+ G+ +H V ++G + V ++NALI MYA C ++ A +F +M+ R+ VS
Sbjct: 251 LAASIAGRQVHGLV---IALGFDSC-VFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVS 306
Query: 326 WTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMN 370
WTS+I G A+ G A++AL +TF+G++ ACSH GFV++GR+ F+ M
Sbjct: 307 WTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMT 366
Query: 371 QNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELA 430
+++GI+P ++HY C++DL R+GL+DEA +L+ MP P++ +LL C+ ++
Sbjct: 367 KDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMG 426
Query: 431 SQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQIN 490
++A LV+ + + Y+ L++N+YA+A W V+ R+K+ +M VRK PG S V++
Sbjct: 427 IRIADHLVSSFKLKDPSTYI-LLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVR 485
Query: 491 GVLHDFVAGDSTYKQASLIYKTLGEITMQA-MQEGYKPDISELFLGIEE 538
F AG++++ I++ L ++ + ++ GY PD S + ++E
Sbjct: 486 KETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDE 534
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 39/227 (17%)
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL-LF 179
Y L +CAR + +H ++ G + L+N+Y G+CG L +F
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVY----GKCGAASHALQVF 61
Query: 180 DDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALS 239
D+MP R ++W S+L T ++ +GK+ S
Sbjct: 62 DEMPHRDHIAWASVL----------------------------TALNQANLSGKTLSVFS 93
Query: 240 LFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALI 299
R D A + ACA +G + G+ +H + F V + ++L+
Sbjct: 94 SVGSSSGLRP--DDFVFSALVKACANLGSIDHGRQVHCH----FIVSEYANDEVVKSSLV 147
Query: 300 HMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF 346
MYA CG + A VF ++ +NT+SWT+M++G+AK G +EAL F
Sbjct: 148 DMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELF 194
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 298 bits (764), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 166/496 (33%), Positives = 266/496 (53%), Gaps = 53/496 (10%)
Query: 58 LLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPD 117
L+ Y + GY+ NA K+F++ WN MI G+A + ++++ L+K M+ PD
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 118 EYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARL 177
E T ++S CA+ G G QVH + G+ SN+ I L++LY
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLY-------------- 311
Query: 178 LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQA 237
K G+++ A +F+ +P+++V+SW T+I G ++A
Sbjct: 312 --------------------SKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEA 351
Query: 238 LSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNA 297
L LF EM R+ + V +++ L ACA +G + +G+WIH Y+++ SL +
Sbjct: 352 LLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNAS--SLRTS 409
Query: 298 LIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL-------------- 343
LI MYA CG+IE A+ VF + ++ SW +MI GFA G A +
Sbjct: 410 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPD 469
Query: 344 -LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLV 402
+TF+G+LSACSH G +D GR F M Q++ + P++EHYGCM+DL +GL EA ++
Sbjct: 470 DITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMI 529
Query: 403 QNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKR 462
M M+P+ + SLL C++H N EL A+ L+ +I+PE Y+ L++N+YA+A R
Sbjct: 530 NMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLI-KIEPENPGSYV-LLSNIYASAGR 587
Query: 463 WQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQ 522
W +VA R + G++K PG S ++I+ V+H+F+ GD + + IY L E+ + +
Sbjct: 588 WNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK 647
Query: 523 EGYKPDISELFLGIEE 538
G+ PD SE+ +EE
Sbjct: 648 AGFVPDTSEVLQEMEE 663
Score = 255 bits (651), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 146/452 (32%), Positives = 249/452 (55%), Gaps = 27/452 (5%)
Query: 5 EIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVT 64
+P++ ++ SLL T ++L IH+Q+I G NY L+KL+ F +
Sbjct: 18 HFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCIL 77
Query: 65 SGY---LINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
S + L A VF+ + P+ IWN M RGHA S P ++ LY MI P+ YT+
Sbjct: 78 SPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTF 137
Query: 122 SFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDD 181
F+L CA+ F+EG+Q+HG VL G ++++ T+L+++Y+ +G + A +FD
Sbjct: 138 PFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGR---LEDAHKVFDK 194
Query: 182 MPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLF 241
P R VVS+ +L+KGY RG I+ A K+FDE+P ++VVSW MISG A+ G ++AL LF
Sbjct: 195 SPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELF 254
Query: 242 NEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHM 301
+M + V D+ +V +SACA+ G ++LG+ +H +++++ G +V NALI +
Sbjct: 255 KDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDH-GFGSNLKIV---NALIDL 310
Query: 302 YASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF--------------- 346
Y+ CGE+E A G+F ++ ++ +SW ++I G+ +EALL F
Sbjct: 311 YSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTM 370
Query: 347 LGVLSACSHGGFVDEGRQFFECMNQNW-GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM 405
L +L AC+H G +D GR +++ G+ ++D++++ G + EA V N
Sbjct: 371 LSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDI-EAAHQVFNS 429
Query: 406 PMKPNDAVLGSLLLGCRIHNNAELASQVAQKL 437
+ + + +++ G +H A+ + + ++
Sbjct: 430 ILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 461
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 298 bits (764), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 169/532 (31%), Positives = 277/532 (52%), Gaps = 59/532 (11%)
Query: 17 ALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV---TSGYLINAHK 73
+ T+ L+ N+ + L QI + I + +++ AKL+ F T + A
Sbjct: 26 TVNTQNPILLISKCNSLRELMQIQAYAIKSHIEDVSFV-AKLINFCTESPTESSMSYARH 84
Query: 74 VFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGL 133
+FE P I+N M RG++R P + L+ ++++ PD YT+ LL CA
Sbjct: 85 LFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKA 144
Query: 134 FREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSL 193
EG Q+H + G NV++ L+N+Y EC
Sbjct: 145 LEEGRQLHCLSMKLGLDDNVYVCPTLINMY----TECE---------------------- 178
Query: 194 LKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQ 253
D+D A +FD + VV + MI+G A+ + +ALSLF EM+ + ++
Sbjct: 179 --------DVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNE 230
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
+ L++ LS+CA +G L LGKWIH Y +++ V +N ALI M+A CG +++A
Sbjct: 231 ITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCK----YVKVNTALIDMFAKCGSLDDAVS 286
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEALL---------------TFLGVLSACSHGGF 358
+F KM+ ++T +W++MI +A G A++++L TFLG+L+ACSH G
Sbjct: 287 IFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGR 346
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLL 418
V+EGR++F M +GI P I+HYG MVDL SRAG +++A+ + +P+ P + LL
Sbjct: 347 VEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILL 406
Query: 419 LGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGV 478
C HNN +LA +V++++ E+D Y+ L +N+YA K+W+ V ++R+ M
Sbjct: 407 AACSSHNNLDLAEKVSERIF-ELDDSHGGDYVIL-SNLYARNKKWEYVDSLRKVMKDRKA 464
Query: 479 RKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDIS 530
K PG S +++N V+H+F +GD + +++ L E+ + GY PD S
Sbjct: 465 VKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTS 516
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 298 bits (763), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 167/516 (32%), Positives = 274/516 (53%), Gaps = 56/516 (10%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
+HS + FS+++ LL Y G L +A VF + + S + MI G+AR
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTN 158
++V L+++M ++ PD YT + +L+ CAR L EG++VH + + ++F+
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA 437
Query: 159 LMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNV 218
LM++Y K G + A +F EM +++
Sbjct: 438 LMDMY----------------------------------AKCGSMQEAELVFSEMRVKDI 463
Query: 219 VSWTTMISGCAQNGKSRQALSLFNEM-RRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
+SW T+I G ++N + +ALSLFN + R D+ + L ACA + G+ IH
Sbjct: 464 ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHG 523
Query: 278 YVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQG 337
Y+ N V N+L+ MYA CG + A+ +F + ++ VSWT MI G+ G
Sbjct: 524 YIMRNGYFSDRHVA----NSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHG 579
Query: 338 YAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHY 382
+ +EA+ ++F+ +L ACSH G VDEG +FF M I+P +EHY
Sbjct: 580 FGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHY 639
Query: 383 GCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEID 442
C+VD+ +R G + +A+ ++NMP+ P+ + G+LL GCRIH++ +LA +VA+K V E++
Sbjct: 640 ACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEK-VFELE 698
Query: 443 PEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDST 502
PE GY L+AN+YA A++W+ V +R+++ + G+RK PG SW++I G ++ FVAGDS+
Sbjct: 699 PEN-TGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSS 757
Query: 503 YKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+ I L ++ + ++EGY P + EE
Sbjct: 758 NPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEE 793
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 201/410 (49%), Gaps = 59/410 (14%)
Query: 18 LTTRQIFSLLQIRNTTKTLF---QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKV 74
+ R + S+LQ+ +K+L ++ + I NGF + + +KL Y G L A +V
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 75 FEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLF 134
F++ + WN ++ A+S S+ L+K+M+ E D YT+S + +
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 135 REGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLL 194
GEQ+HG +L SG+ G VG NSL+
Sbjct: 212 HGGEQLHGFILKSGF-----------------GERNSVG-----------------NSLV 237
Query: 195 KGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQV 254
Y+K +D A K+FDEM R+V+SW ++I+G NG + + LS+F +M + + +D
Sbjct: 238 AFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLA 297
Query: 255 ALVAALSACAEIGDLKLGKWIHSY-VEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
+V+ + CA+ + LG+ +HS V+ FS RE N L+ MY+ CG+++ A
Sbjct: 298 TIVSVFAGCADSRLISLGRAVHSIGVKACFS--REDRFC---NTLLDMYSKCGDLDSAKA 352
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEA---------------LLTFLGVLSACSHGGF 358
VFR+M R+ VS+TSMI G+A++G A EA + T VL+ C+
Sbjct: 353 VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 412
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
+DEG++ E + +N + I ++D++++ G M EA + M +K
Sbjct: 413 LDEGKRVHEWIKEN-DLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK 461
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH I+ NG+ ++ L+ Y G L+ AH +F+ + W MI G+
Sbjct: 520 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHG 579
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREG 137
++++ L+ QM E DE ++ LL C+ GL EG
Sbjct: 580 FGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 619
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 298 bits (763), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 174/497 (35%), Positives = 273/497 (54%), Gaps = 28/497 (5%)
Query: 58 LLAFYVTSGYLINAHKVFE-KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEP 116
++ YV +GY ++ E +N +N MI G+ ++++ + ++M+ E
Sbjct: 225 MMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIEL 284
Query: 117 DEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECG-VGCA 175
DE+TY ++ CA GL + G+QVH VL S F +L++LY +CG A
Sbjct: 285 DEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHF-DNSLVSLYY----KCGKFDEA 339
Query: 176 RLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSR 235
R +F+ MPA+ +VSWN+LL GYV G I A IF EM +N++SW MISG A+NG
Sbjct: 340 RAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGE 399
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
+ L LF+ M+R A A+ +CA +G G+ H+ + +G + L S
Sbjct: 400 EGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQL---LKIGFDSSL-SAG 455
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL------------ 343
NALI MYA CG +EEA VFR M ++VSW ++I + G+ EA+
Sbjct: 456 NALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIR 515
Query: 344 ---LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFS 400
+T L VL+ACSH G VD+GR++F+ M + I P +HY ++DL R+G +A S
Sbjct: 516 PDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAES 575
Query: 401 LVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAA 460
+++++P KP + +LL GCR+H N EL A KL I PE Y+ L++N++AA
Sbjct: 576 VIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLI-PEHDGTYM-LLSNMHAAT 633
Query: 461 KRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQA 520
+W++VA VR+ M GV+K SW+++ +H F+ D+++ +A +Y L ++ +
Sbjct: 634 GQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEM 693
Query: 521 MQEGYKPDISELFLGIE 537
+ GY PD S + +E
Sbjct: 694 RRLGYVPDTSFVLHDVE 710
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 188/402 (46%), Gaps = 60/402 (14%)
Query: 27 LQIRNTTKTLFQ-IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPS--- 82
L +R T+ L + +H II GF + +IL +L+ Y S L A ++F++ P
Sbjct: 23 LPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIA 82
Query: 83 ------------------------------TAIWNQMIRGHARSETPEKSVYLYKQMIDK 112
T ++N MI G + + ++ L+ +M +
Sbjct: 83 RTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHE 142
Query: 113 ETEPDEYTYSFLLSVCARCGLFREGE----QVHGRVLASGYCSNVFIRTNLMNLYLMSGG 168
+PD +T++ SV A L + E Q H L SG + L+++Y
Sbjct: 143 GFKPDNFTFA---SVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCAS 199
Query: 169 ECGV-GCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM-PHRNVVSWTTMIS 226
+ AR +FD++ + SW +++ GYVK G D ++ + M + +V++ MIS
Sbjct: 200 SPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMIS 259
Query: 227 GCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVG 286
G G ++AL + M + + LD+ + + ACA G L+LGK +H+YV +
Sbjct: 260 GYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV-----LR 314
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEA---- 342
RE +N+L+ +Y CG+ +EA +F KM ++ VSW ++++G+ G+ EA
Sbjct: 315 REDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIF 374
Query: 343 -------LLTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKP 377
+L+++ ++S + GF +EG + F CM + G +P
Sbjct: 375 KEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKRE-GFEP 415
Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 165/385 (42%), Gaps = 50/385 (12%)
Query: 140 VHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVK 199
VHG ++ G+ I L+++Y S + AR LFD++ ++ +++ GY
Sbjct: 36 VHGNIITFGFQPRAHILNRLIDVYCKSSE---LNYARQLFDEISEPDKIARTTMVSGYCA 92
Query: 200 RGDIDGAWKIFDEMP--HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
GDI A +F++ P R+ V + MI+G + N A++LF +M+ D
Sbjct: 93 SGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFA 152
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGE----IEEAYG 313
+ L+ A + D + K + G + S++NAL+ +Y+ C + A
Sbjct: 153 SVLAGLALVADDE--KQCVQFHAAALKSG-AGYITSVSNALVSVYSKCASSPSLLHSARK 209
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEALLTFLGVLSACSHGGFVDEGRQFFECMNQNW 373
VF ++ ++ SWT+M+TG+ K GY D G + E M+ N
Sbjct: 210 VFDEILEKDERSWTTMMTGYVKNGY--------------------FDLGEELLEGMDDNM 249
Query: 374 GIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNM---PMKPNDAVLGSLLLGCRIHNNAELA 430
++ Y M+ + G EA +V+ M ++ ++ S++ C +L
Sbjct: 250 ----KLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLG 305
Query: 431 SQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQIN 490
QV ++ D + + + ++Y ++ + A+ +KM P + V N
Sbjct: 306 KQVHAYVLRRED--FSFHFDNSLVSLYYKCGKFDEARAIFEKM--------PAKDLVSWN 355
Query: 491 GVLHDFVAGDSTYKQASLIYKTLGE 515
+L +V+ +A LI+K + E
Sbjct: 356 ALLSGYVSSGHI-GEAKLIFKEMKE 379
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
Q H+Q++ GF L+ Y G + A +VF + WN +I +
Sbjct: 438 QYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHG 497
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQ 139
++V +Y++M+ K PD T +L+ C+ GL +G +
Sbjct: 498 HGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRK 539
>sp|Q9C866|PPR65_ARATH Pentatricopeptide repeat-containing protein At1g31430
OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1
Length = 570
Score = 298 bits (762), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 172/486 (35%), Positives = 271/486 (55%), Gaps = 35/486 (7%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H + G +Y+ L+ Y + G + HKVF++ WN +I + +
Sbjct: 67 KVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNG 126
Query: 98 TPEKSVYLYKQMIDKET-EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIR 156
E ++ ++K+M + + DE T LS C+ GE+++ R + + + +V I
Sbjct: 127 RFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIY-RFVVTEFEMSVRIG 185
Query: 157 TNLMNLYLMSGGECGVGC---ARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEM 213
L++++ C GC AR +FD M ++V W S++ GYV G ID A +F+
Sbjct: 186 NALVDMF------CKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERS 239
Query: 214 PHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGK 273
P ++VV WT M++G Q + +AL LF M+ A + D LV+ L+ CA+ G L+ GK
Sbjct: 240 PVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGK 299
Query: 274 WIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGF 333
WIH Y+ EN R V + AL+ MYA CG IE A VF +++ R+T SWTS+I G
Sbjct: 300 WIHGYINEN----RVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGL 355
Query: 334 AKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPR 378
A G + AL +TF+ VL+AC+HGGFV EGR+ F M + ++P+
Sbjct: 356 AMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPK 415
Query: 379 IEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDA---VLGSLLLGCRIHNNAELASQVAQ 435
EH C++DL RAGL+DEA L+ M + ++ V SLL R + N ++A +VA+
Sbjct: 416 SEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAE 475
Query: 436 KLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHD 495
KL +++ ++ + L+A+VYA+A RW+DV VR+KM +G+RK PG S ++I+GV H+
Sbjct: 476 KL-EKVEVSDSSAH-TLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHE 533
Query: 496 FVAGDS 501
F+ GD
Sbjct: 534 FIVGDD 539
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 143/310 (46%), Gaps = 50/310 (16%)
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE 138
+ PS ++N+M++ A ++ K + L+ ++ + PD +T +L R EGE
Sbjct: 7 QTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGE 66
Query: 139 QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYV 198
+VHG + +G + ++ +LM +Y G + +FD+MP R VVSWN L+ YV
Sbjct: 67 KVHGYAVKAGLEFDSYVSNSLMGMYASLG---KIEITHKVFDEMPQRDVVSWNGLISSYV 123
Query: 199 KRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVA 258
G + A +F M + + + D+ +V+
Sbjct: 124 GNGRFEDAIGVFKRMS------------------------------QESNLKFDEGTIVS 153
Query: 259 ALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKM 318
LSAC+ + +L++G+ I+ +V F + V + NAL+ M+ CG +++A VF M
Sbjct: 154 TLSACSALKNLEIGERIYRFVVTEFEMS-----VRIGNALVDMFCKCGCLDKARAVFDSM 208
Query: 319 QRRNTVSWTSMITGFAKQGYAQEALLTFLG------VLSACSHGGFV-----DEGRQFFE 367
+ +N WTSM+ G+ G EA + F VL G+V DE + F
Sbjct: 209 RDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFR 268
Query: 368 CMNQNWGIKP 377
CM Q GI+P
Sbjct: 269 CM-QTAGIRP 277
>sp|Q9LJI9|PP260_ARATH Pentatricopeptide repeat-containing protein At3g28660
OS=Arabidopsis thaliana GN=PCMP-E80 PE=2 SV=1
Length = 504
Score = 297 bits (761), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 170/520 (32%), Positives = 277/520 (53%), Gaps = 67/520 (12%)
Query: 31 NTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV----TSGYLINAHKVFEKTENPSTAIW 86
NT K + HS II+G + Y ++KLL ++ + + A +F+ E P++ ++
Sbjct: 22 NTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVY 81
Query: 87 NQMIRGHARSETPEKSVYLYKQMIDKETE---PDEYTYSFLLSVCARCGLFREGEQVHGR 143
+ MIR +RS P + + M+ +E E P T+ FL+ C + F G+Q+H
Sbjct: 82 DTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCW 141
Query: 144 VLASG-YCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGD 202
V+ +G + S+ ++T ++ +Y+ +LLFD
Sbjct: 142 VVKNGVFLSDGHVQTGVLRIYVED---------KLLFD---------------------- 170
Query: 203 IDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSA 262
A K+FDE+P +VV W +++G + G + L +F EM + D+ ++ AL+A
Sbjct: 171 ---ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTA 227
Query: 263 CAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRN 322
CA++G L GKWIH +V++ + + V + AL+ MYA CG IE A VF K+ RRN
Sbjct: 228 CAQVGALAQGKWIHEFVKKKRWIESD---VFVGTALVDMYAKCGCIETAVEVFEKLTRRN 284
Query: 323 TVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFF 366
SW ++I G+A GYA++A + LGVL+AC+HGGF++EGR
Sbjct: 285 VFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTML 344
Query: 367 ECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNN 426
E M +GI P+ EHY C+VDL RAG +D+A L++ MPMKP +V G+LL GCR H N
Sbjct: 345 ENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKN 404
Query: 427 AELASQVAQKLV----AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPP 482
EL Q L+ ++ E+AA L ++N+Y + +R + VR + + G+RK P
Sbjct: 405 VELGELAVQNLLDLEKGNVEEEEAA--LVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTP 462
Query: 483 GQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQ 522
G S ++++G++ FV+GD ++ I+ + +++ A Q
Sbjct: 463 GWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIHLLSVDASQ 502
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 296 bits (757), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 166/519 (31%), Positives = 271/519 (52%), Gaps = 59/519 (11%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
++H+ +I + Y+ +LL FY L +A KV ++ + W MI ++++
Sbjct: 73 RVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTG 132
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRT 157
+++ ++ +M+ + +P+E+T++ +L+ C R G+Q+HG ++ Y S++F+ +
Sbjct: 133 HSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGS 192
Query: 158 NLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN 217
+L+++ Y K G I A +IF+ +P R+
Sbjct: 193 SLLDM----------------------------------YAKAGQIKEAREIFECLPERD 218
Query: 218 VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHS 277
VVS T +I+G AQ G +AL +F+ + + + V + L+A + + L GK H
Sbjct: 219 VVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHC 278
Query: 278 YVEENFSVGRE-PVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQ 336
+V + RE P L N+LI MY+ CG + A +F M R +SW +M+ G++K
Sbjct: 279 HV-----LRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKH 333
Query: 337 GYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFFECM-NQNWGIKPRI 379
G +E L +T L VLS CSHG D G F+ M +G KP
Sbjct: 334 GLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGT 393
Query: 380 EHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
EHYGC+VD+ RAG +DEAF ++ MP KP VLGSLL CR+H + ++ V ++L+
Sbjct: 394 EHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLI- 452
Query: 440 EIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAG 499
EI+PE A Y+ L +N+YA+A RW DV VR M++ V K PG+SW+Q LH F A
Sbjct: 453 EIEPENAGNYVIL-SNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHAN 511
Query: 500 DSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
D T+ + + + EI+++ Q GY PD+S + ++E
Sbjct: 512 DRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDE 550
>sp|Q9LJJ1|PP259_ARATH Putative pentatricopeptide repeat-containing protein At3g28640
OS=Arabidopsis thaliana GN=PCMP-E79 PE=3 SV=1
Length = 504
Score = 295 bits (754), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 168/520 (32%), Positives = 279/520 (53%), Gaps = 67/520 (12%)
Query: 31 NTTKTLFQIHSQIIINGFSQKNYILAKLLAFYV----TSGYLINAHKVFEKTENPSTAIW 86
NT K + HS II+G + Y ++KLL ++ + + A +F+ E P++ ++
Sbjct: 22 NTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVY 81
Query: 87 NQMIRGHARSETPEKSVYLYKQMIDKETE---PDEYTYSFLLSVCARCGLFREGEQVHGR 143
+ MIR +RS P + + M+ +E E P T+ FL+ C + F G+Q+H
Sbjct: 82 DTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCW 141
Query: 144 VLASG-YCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGD 202
V+ +G + S+ ++T ++ +Y+ +LL D
Sbjct: 142 VVKNGVFLSDSHVQTGVLRIYVED---------KLLLD---------------------- 170
Query: 203 IDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSA 262
A K+FDE+P +VV W +++G + G + L +F EM + D+ ++ AL+A
Sbjct: 171 ---ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTA 227
Query: 263 CAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRN 322
CA++G L GKWIH +V++ + + V + AL+ MYA CG IE A VF+K+ RRN
Sbjct: 228 CAQVGALAQGKWIHEFVKKKSWIESD---VFVGTALVDMYAKCGCIETAVEVFKKLTRRN 284
Query: 323 TVSWTSMITGFAKQGYAQEAL----------------LTFLGVLSACSHGGFVDEGRQFF 366
SW ++I G+A GYA++A+ + LGVL+AC+HGGF++EGR
Sbjct: 285 VFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSML 344
Query: 367 ECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNN 426
E M + I P+ EHY C+VDL RAG +D+A +L++ MPMKP +V G+LL GCR H N
Sbjct: 345 ENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKN 404
Query: 427 AELASQVAQKLV----AEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPP 482
EL + L+ ++ E+AA L ++N+Y + +R + + VR + + GVRK P
Sbjct: 405 VELGELAVKNLLDLEKGNVEEEEAA--LVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTP 462
Query: 483 GQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQ 522
G S ++++G + FV+GD ++ I+ + +++ A+Q
Sbjct: 463 GWSVLEVDGNVTKFVSGDVSHPNLLQIHTVIHLLSVDALQ 502
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 294 bits (753), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 177/549 (32%), Positives = 290/549 (52%), Gaps = 65/549 (11%)
Query: 14 SSKALTTRQIFSLLQI----RNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLI 69
S ++ ++Q + LL + R++ ++H I+ NG Q ++ KL+ Y G +
Sbjct: 70 SQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVD 129
Query: 70 NAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVC- 128
A KVF+KT + +WN + R + E+ + LY +M E D +TY+++L C
Sbjct: 130 YARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACV 189
Query: 129 -ARCGL--FREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPAR 185
+ C + +G+++H + GY S+V+I T L+++Y G C V A +F MP R
Sbjct: 190 ASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFG--C-VDYASYVFGGMPVR 246
Query: 186 SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR 245
+VVSW++++ Y A+NGK+ +AL F EM
Sbjct: 247 NVVSWSAMIACY-------------------------------AKNGKAFEALRTFREMM 275
Query: 246 R--ARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYA 303
R + V +V+ L ACA + L+ GK IH Y+ G + +L + +AL+ MY
Sbjct: 276 RETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYI---LRRGLDSILPVI-SALVTMYG 331
Query: 304 SCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLG 348
CG++E VF +M R+ VSW S+I+ + GY ++A+ +TF+
Sbjct: 332 RCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVS 391
Query: 349 VLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMK 408
VL ACSH G V+EG++ FE M ++ GIKP+IEHY CMVDL RA +DEA +VQ+M +
Sbjct: 392 VLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTE 451
Query: 409 PNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAA 468
P V GSLL CRIH N ELA + +++L A ++P+ A Y+ L+A++YA A+ W +V
Sbjct: 452 PGPKVWGSLLGSCRIHGNVELAERASRRLFA-LEPKNAGNYV-LLADIYAEAQMWDEVKR 509
Query: 469 VRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPD 528
V++ + G++K PG+ W+++ ++ FV+ D I+ L ++ ++GY P
Sbjct: 510 VKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQ 569
Query: 529 ISELFLGIE 537
+ +E
Sbjct: 570 TKGVLYELE 578
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 152/375 (40%), Gaps = 67/375 (17%)
Query: 87 NQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLA 146
NQ+I+ + ++++ +++ +E+ P + TY L+ C + +VH +L
Sbjct: 50 NQLIQSLCKEGKLKQAI----RVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 147 SGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGA 206
+G + F+ T L+ +Y G V AR +FD R++ WN+L +
Sbjct: 106 NGSDQDPFLATKLIGMYSDLG---SVDYARKVFDKTRKRTIYVWNALFRAL--------- 153
Query: 207 WKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSAC--- 263
G + L L+ +M R V D+ L AC
Sbjct: 154 ----------------------TLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVAS 191
Query: 264 -AEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRN 322
+ L GK IH+++ V + L+ MYA G ++ A VF M RN
Sbjct: 192 ECTVNHLMKGKEIHAHLTRRGYSSH----VYIMTTLVDMYARFGCVDYASYVFGGMPVRN 247
Query: 323 TVSWTSMITGFAKQGYAQEALLTF-----------------LGVLSACSHGGFVDEGRQF 365
VSW++MI +AK G A EAL TF + VL AC+ +++G+
Sbjct: 248 VVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLI 307
Query: 366 FECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAV-LGSLLLGCRIH 424
+ + G+ + +V ++ R G ++ + M D V SL+ +H
Sbjct: 308 HGYILRR-GLDSILPVISALVTMYGRCGKLEVGQRVFDR--MHDRDVVSWNSLISSYGVH 364
Query: 425 NNAELASQVAQKLVA 439
+ A Q+ ++++A
Sbjct: 365 GYGKKAIQIFEEMLA 379
>sp|Q9SR01|PP212_ARATH Pentatricopeptide repeat-containing protein At3g04750,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E81 PE=2
SV=1
Length = 661
Score = 293 bits (750), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 182/503 (36%), Positives = 271/503 (53%), Gaps = 33/503 (6%)
Query: 21 RQIF-SLLQIRNTTKTLFQIHSQIIING-FSQKNYILAKLLAFYVTSGYLINAHKVFEKT 78
RQ F L++ + + QIH II++G S NY+ L+ FY+ G A KVF +
Sbjct: 133 RQTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARM 192
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE 138
+P + +N MI G+A+ +++ LY +M+ EPDEYT LL C R G+
Sbjct: 193 PHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGK 252
Query: 139 QVHGRVLASG--YCSNVFIRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLK 195
VHG + G Y SN+ + L+++Y +C G A+ FD M + + SWN+++
Sbjct: 253 GVHGWIERRGPVYSSNLILSNALLDMYF----KCKESGLAKRAFDAMKKKDMRSWNTMVV 308
Query: 196 GYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNG-KSRQALSLFNEMRRA-RVGLDQ 253
G+V+ GD++ A +FD+MP R++VSW +++ G ++ G R LF EM +V D+
Sbjct: 309 GFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDR 368
Query: 254 VALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYG 313
V +V+ +S A G+L G+W+H V G L++ALI MY CG IE A+
Sbjct: 369 VTMVSLISGAANNGELSHGRWVHGLVIRLQLKGD----AFLSSALIDMYCKCGIIERAFM 424
Query: 314 VFRKMQRRNTVSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGF 358
VF+ ++ WTSMITG A G Q+AL +T L VL+ACSH G
Sbjct: 425 VFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGL 484
Query: 359 VDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQ-NMPMKPNDAVLGSL 417
V+EG F M +G P EHYG +VDL RAG ++EA +VQ MPM+P+ ++ GS+
Sbjct: 485 VEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSI 544
Query: 418 LLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMG 477
L CR + E A +L+ +++PE+ GY+ L++N+YA RW R+ M G
Sbjct: 545 LSACRGGEDIETAELALTELL-KLEPEKEGGYV-LLSNIYATVGRWGYSDKTREAMENRG 602
Query: 478 VRKPPGQSWVQINGVLHDFVAGD 500
V+K G S V LH FVA +
Sbjct: 603 VKKTAGYSSVVGVEGLHRFVAAE 625
Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 120/496 (24%), Positives = 212/496 (42%), Gaps = 116/496 (23%)
Query: 22 QIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFY-VTSGYLINAHKVF--EKT 78
Q LL+ N+ Q+ +QI+ + +++L+ F +T ++ K+ T
Sbjct: 36 QSLVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFT 95
Query: 79 ENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGE 138
NP+ ++N MI A S + + LY MI PD T+ +L+ + E +
Sbjct: 96 PNPNVFVYNTMIS--AVSSSKNECFGLYSSMIRHRVSPDRQTFLYLMKASS---FLSEVK 150
Query: 139 QVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYV 198
Q+H ++ SG S + YL WNSL+K Y+
Sbjct: 151 QIHCHIIVSGCLS--------LGNYL-------------------------WNSLVKFYM 177
Query: 199 KRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVA 258
+ G+ A K+F MPH +V S+ MI G A+ G S +AL L+ +M + D+ +++
Sbjct: 178 ELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLS 237
Query: 259 ALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVS---LNNALIHMYASC---------- 305
L C + D++LGK +H ++E R PV S L+NAL+ MY C
Sbjct: 238 LLVCCGHLSDIRLGKGVHGWIER-----RGPVYSSNLILSNALLDMYFKCKESGLAKRAF 292
Query: 306 ---------------------GEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL- 343
G++E A VF +M +R+ VSW S++ G++K+G Q +
Sbjct: 293 DAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVR 352
Query: 344 ----------------LTFLGVLSACSHGGFVDEGRQFFECMNQNW--GIKPRIEHYG-- 383
+T + ++S ++ G + GR W G+ R++ G
Sbjct: 353 ELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGR---------WVHGLVIRLQLKGDA 403
Query: 384 ----CMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVA 439
++D++ + G+++ AF +V + + A+ S++ G H N + A Q+ ++
Sbjct: 404 FLSSALIDMYCKCGIIERAF-MVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQE 462
Query: 440 E-IDPEQAAGYLALVA 454
E + P L A
Sbjct: 463 EGVTPNNVTLLAVLTA 478
>sp|Q56X05|PPR15_ARATH Pentatricopeptide repeat-containing protein At1g06145
OS=Arabidopsis thaliana GN=EMB1444 PE=2 SV=2
Length = 577
Score = 293 bits (749), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 175/568 (30%), Positives = 294/568 (51%), Gaps = 58/568 (10%)
Query: 13 TSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAH 72
++S +L + +++ +T K L + +I +Q ++ + + + L A
Sbjct: 21 SASLSLAPPNLKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAV 80
Query: 73 KVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCG 132
+ + P+ ++N + +G P +S+ LY +M+ P YTYS L+ +
Sbjct: 81 STMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFAS 140
Query: 133 LFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSW-- 190
F E Q H + G+ +V I+T L++ Y +G + AR +FD+MP R ++W
Sbjct: 141 RFGESLQAH--IWKFGFGFHVKIQTTLIDFYSATGR---IREARKVFDEMPERDDIAWTT 195
Query: 191 -----------------------------NSLLKGYVKRGDIDGAWKIFDEMPHRNVVSW 221
N L+ GY+ G+++ A +F++MP ++++SW
Sbjct: 196 MVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISW 255
Query: 222 TTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEE 281
TTMI G +QN + R+A+++F +M + D+V + +SACA +G L++GK +H Y +
Sbjct: 256 TTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQ 315
Query: 282 NFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQE 341
N V + V + +AL+ MY+ CG +E A VF + ++N W S+I G A G+AQE
Sbjct: 316 NGFV----LDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQE 371
Query: 342 AL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMV 386
AL +TF+ V +AC+H G VDEGR+ + M ++ I +EHYG MV
Sbjct: 372 ALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMV 431
Query: 387 DLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQA 446
LFS+AGL+ EA L+ NM +PN + G+LL GCRIH N +A KL+ ++P
Sbjct: 432 HLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMV-LEP-MN 489
Query: 447 AGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKP-PGQSWVQINGVLHDFVAGDSTYKQ 505
+GY L+ ++YA RW+DVA +R +M ++G+ K PG S ++I+ H F A D ++
Sbjct: 490 SGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSA 549
Query: 506 ASLIYKTLGEITMQAMQEGYKPDISELF 533
+ + L EI Q GY + ++
Sbjct: 550 SDEVCLLLDEIYDQMGLAGYVQETENVY 577
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 10/169 (5%)
Query: 1 MLVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLA 60
M+ E IIP + T S ++ +L+I ++H + NGF YI + L+
Sbjct: 278 MMEEGIIP-DEVTMSTVISACAHLGVLEIGK------EVHMYTLQNGFVLDVYIGSALVD 330
Query: 61 FYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYT 120
Y G L A VF + WN +I G A ++++ ++ +M + +P+ T
Sbjct: 331 MYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVT 390
Query: 121 YSFLLSVCARCGLFREGEQVHGRVLASGY--CSNVFIRTNLMNLYLMSG 167
+ + + C GL EG +++ R + Y SNV +++L+ +G
Sbjct: 391 FVSVFTACTHAGLVDEGRRIY-RSMIDDYSIVSNVEHYGGMVHLFSKAG 438
>sp|O49399|PP321_ARATH Pentatricopeptide repeat-containing protein At4g18840
OS=Arabidopsis thaliana GN=PCMP-E101 PE=3 SV=2
Length = 545
Score = 293 bits (749), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 173/506 (34%), Positives = 271/506 (53%), Gaps = 61/506 (12%)
Query: 19 TTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTS---GYLINAHKVF 75
T I S + + + Q H+ ++ G + +KL+AF T+ + AH +
Sbjct: 38 TPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSIL 97
Query: 76 EKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCAR-CGLF 134
+ +P+ N +IR +A S TPE ++ ++++M+ PD+Y+++F+L CA CG F
Sbjct: 98 NRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCG-F 156
Query: 135 REGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLL 194
EG Q+HG + SG ++VF+ L+N+Y SG AR + D MP R VSWNSLL
Sbjct: 157 EEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGY---FEIARKVLDRMPVRDAVSWNSLL 213
Query: 195 KGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM---------- 244
Y+++G +D A +FDEM RNV SW MISG A G ++A +F+ M
Sbjct: 214 SAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNA 273
Query: 245 ---RRARVGL-------------------DQVALVAALSACAEIGDLKLGKWIHSYVEEN 282
A VG D LV+ LSACA +G L G+W+H Y++++
Sbjct: 274 MVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKH 333
Query: 283 FSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEA 342
+ E L + AL+ MY+ CG+I++A VFR +R+ +W S+I+ + G ++A
Sbjct: 334 -GIEIEGFLAT---ALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDA 389
Query: 343 L---------------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVD 387
L +TF+GVLSAC+H G +D+ R+ FE M+ + ++P IEHYGCMVD
Sbjct: 390 LEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVD 449
Query: 388 LFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAA 447
L R G ++EA LV +P +L SLL C+ E A ++A +L+ E++ ++
Sbjct: 450 LLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLL-ELNLRDSS 508
Query: 448 GYLALVANVYAAAKRWQDVAAVRQKM 473
GY A ++N+YA+ RW+ V R+ M
Sbjct: 509 GY-AQMSNLYASDGRWEKVIDGRRNM 533
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 65/168 (38%), Gaps = 22/168 (13%)
Query: 12 ATSSKALTT-RQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLIN 70
ATS + ++T I S L + K +I S+++ GF +L+ G L
Sbjct: 364 ATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQ 423
Query: 71 AHKVFEKTEN-----PSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLL 125
A K+FE + P+ + M+ R E++ L ++ E LL
Sbjct: 424 ARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEA---SILLESLL 480
Query: 126 SVCARCGLFREGEQVHGRVL------ASGYCSNVFIRTNLMNLYLMSG 167
C R G + E++ R+L +SGY + NLY G
Sbjct: 481 GACKRFGQLEQAERIANRLLELNLRDSSGY-------AQMSNLYASDG 521
>sp|Q1PEU4|PP201_ARATH Pentatricopeptide repeat-containing protein At2g44880
OS=Arabidopsis thaliana GN=PCMP-E9 PE=2 SV=2
Length = 555
Score = 293 bits (749), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 174/553 (31%), Positives = 285/553 (51%), Gaps = 92/553 (16%)
Query: 54 ILAKLLAFYVTSGYLINAHKVFE-KTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDK 112
I K L ++ + A K+F+ + + + + N MI+ + + S LY+ + K
Sbjct: 12 IFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDL-RK 70
Query: 113 ET--EPDEYTYSFLLSVCARCGLFREGEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGEC 170
ET PD +T++ L C+ +G Q+H ++ G+C+++++ T ++++Y G
Sbjct: 71 ETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGK-- 128
Query: 171 GVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP---------------- 214
+GCAR FD+MP RS VSW +L+ GY++ G++D A K+FD+MP
Sbjct: 129 -MGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFV 187
Query: 215 ----------------HRNVVSWTTMISG-C----------------------------- 228
H+ V++WTTMI G C
Sbjct: 188 KSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGG 247
Query: 229 -AQNGKSRQALSLFNEMR-RARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVG 286
QN + ++ + LF EM+ + D V +++ L A ++ G L LG+W H +V+
Sbjct: 248 YCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRK---- 303
Query: 287 REPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEAL--- 343
+ V + A++ MY+ CGEIE+A +F +M + SW +MI G+A G A+ AL
Sbjct: 304 KLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLF 363
Query: 344 -----------LTFLGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRA 392
+T L V++AC+HGG V+EGR++F M + G+ +IEHYGCMVDL RA
Sbjct: 364 VTMMIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMRE-MGLNAKIEHYGCMVDLLGRA 422
Query: 393 GLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLAL 452
G + EA L+ NMP +PN +L S L C + + E A ++ +K V E++P+ Y+ L
Sbjct: 423 GSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAV-ELEPQNDGNYV-L 480
Query: 453 VANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKT 512
+ N+YAA KRW D V+ M K +K G S ++IN ++ +F++GD+T+ I+
Sbjct: 481 LRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLV 540
Query: 513 LGEITMQAMQEGY 525
LG++ M +E Y
Sbjct: 541 LGDLLMHMNEEKY 553
>sp|Q9SX45|PPR75_ARATH Pentatricopeptide repeat-containing protein At1g50270
OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1
Length = 596
Score = 292 bits (747), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 164/512 (32%), Positives = 274/512 (53%), Gaps = 59/512 (11%)
Query: 25 SLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTA 84
++ ++R++ FQ H+ I+ G ++ L++ Y +SG A ++F+ E+
Sbjct: 113 AVFKLRDSNP--FQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVV 170
Query: 85 IWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRV 144
W MI G R+ + +++ + +M +E T +L + R G VHG
Sbjct: 171 TWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLY 230
Query: 145 LASGYCS-NVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDI 203
L +G +VFI ++L+++Y G+C +DD
Sbjct: 231 LETGRVKCDVFIGSSLVDMY----GKCSC------YDD---------------------- 258
Query: 204 DGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSAC 263
A K+FDEMP RNVV+WT +I+G Q+ + + +F EM ++ V ++ L + LSAC
Sbjct: 259 --AQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSAC 316
Query: 264 AEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNT 323
A +G L G+ +H Y+ +N S+ + + LI +Y CG +EEA VF ++ +N
Sbjct: 317 AHVGALHRGRRVHCYMIKN-SI---EINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNV 372
Query: 324 VSWTSMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFEC 368
+WT+MI GFA GYA++A +TF+ VLSAC+HGG V+EGR+ F
Sbjct: 373 YTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLS 432
Query: 369 MNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAE 428
M + ++P+ +HY CMVDLF R GL++EA +L++ MPM+P + V G+L C +H + E
Sbjct: 433 MKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYE 492
Query: 429 LASQVAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQ 488
L A +++ ++ P + Y L+AN+Y+ ++ W +VA VR++M V K PG SW++
Sbjct: 493 LGKYAASRVI-KLQPSHSGRY-TLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIE 550
Query: 489 INGVLHDFVAGDSTYK-QASLIYKTLGEITMQ 519
+ G L +F+A D ++ +YKTL + +Q
Sbjct: 551 VKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQ 582
>sp|Q9LNP2|PPR47_ARATH Putative pentatricopeptide repeat-containing protein At1g17630
OS=Arabidopsis thaliana GN=PCMP-E72 PE=3 SV=1
Length = 731
Score = 292 bits (747), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 172/548 (31%), Positives = 291/548 (53%), Gaps = 67/548 (12%)
Query: 39 IHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSET 98
H+Q+I G + +++ +LL Y +G + +A+ +F + + WN MI+G ++
Sbjct: 180 FHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYD 239
Query: 99 PEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFRE---------------------- 136
E +V +++ M +E +PDE T++ +LS ++CG F +
Sbjct: 240 CESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAV 299
Query: 137 -------------GEQVHGRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMP 183
E+VHG V+ G+ + R L+++Y G + V A LF +
Sbjct: 300 FFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVY---GKQGKVKDAEHLFRQIR 356
Query: 184 ARSVVSWNSLLKGYVKRGDIDGAWKIF---DEMPH-----RNVVSWTTMISGCAQNGKSR 235
+ + SWNSL+ +V G +D A +F +EM H NVV+WT++I GC G+
Sbjct: 357 NKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGD 416
Query: 236 QALSLFNEMRRARVGLDQVALVAALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLN 295
+L F +M+ ++V + V + LS CAE+ L LG+ IH +V + E +LV
Sbjct: 417 DSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIR--TSMSENILV--Q 472
Query: 296 NALIHMYASCGEIEEAYGVFRKMQRRNTVSWTSMITGFAKQGYAQEALLTF--------- 346
NAL++MYA CG + E VF ++ ++ +SW S+I G+ G+A++AL F
Sbjct: 473 NALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFH 532
Query: 347 ------LGVLSACSHGGFVDEGRQFFECMNQNWGIKPRIEHYGCMVDLFSRAGLMDEAFS 400
+ VLSACSH G V++GR+ F M++ +G++P+ EHY C+VDL R G + EA
Sbjct: 533 PDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASE 592
Query: 401 LVQNMPMKPNDAVLGSLLLGCRIHNNAELASQVAQKLVAEIDPEQAAGYLALVANVYAAA 460
+V+NMPM+P VLG+LL CR+H N ++A +A +L + ++PE+ Y+ L++N+Y+A
Sbjct: 593 IVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQL-SVLEPERTGSYM-LLSNIYSAG 650
Query: 461 KRWQDVAAVRQKMIKMGVRKPPGQSWVQINGVLHDFVAGDSTYKQASLIYKTLGEITMQA 520
RW++ A VR K ++K G SW+++ + F +G + IY L ++
Sbjct: 651 GRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHM 710
Query: 521 MQEGYKPD 528
+++G D
Sbjct: 711 LKKGPTHD 718
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 178/371 (47%), Gaps = 34/371 (9%)
Query: 26 LLQIRNTTKTLFQIHSQIIINGF-SQKNYILAKLLAFYVTSGYLINAHKVFEKTEN---P 81
LL + T + Q+H+Q++++ F + + A L++ Y G L++A VFE
Sbjct: 62 LLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLS 121
Query: 82 STAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVH 141
+WN +++ + E ++ LY+ M + D Y +L C G F H
Sbjct: 122 DLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFH 181
Query: 142 GRVLASGYCSNVFIRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRG 201
+V+ G N+ + L+ LY +G +G A LF +MP R+ +SWN ++KG+ +
Sbjct: 182 TQVIQIGLKENLHVVNELLTLYPKAG---RMGDAYNLFVEMPVRNRMSWNVMIKGFSQEY 238
Query: 202 DIDGAWKIFDEMPHR----NVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALV 257
D + A KIF+ M + V+WT+++S +Q GK L F+ MR + + AL
Sbjct: 239 DCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALA 298
Query: 258 AALSACAEIGDLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRK 317
S CAE+ L + + +H YV + G E L S NALIH+Y G++++A +FR+
Sbjct: 299 VFFSVCAELEALSIAEKVHGYVIKG---GFEEYLPS-RNALIHVYGKQGKVKDAEHLFRQ 354
Query: 318 MQRRNTVSWTSMITGFAKQGYAQEAL-------------------LTFLGVLSACSHGGF 358
++ + SW S+IT F G EAL +T+ V+ C+ G
Sbjct: 355 IRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGR 414
Query: 359 VDEGRQFFECM 369
D+ ++F M
Sbjct: 415 GDDSLEYFRQM 425
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 46/103 (44%)
Query: 38 QIHSQIIINGFSQKNYILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSE 97
+IH +I S+ + L+ Y G L VFE + WN +I+G+
Sbjct: 455 EIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHG 514
Query: 98 TPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQV 140
EK++ ++ +MI PD +LS C+ GL +G ++
Sbjct: 515 FAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREI 557
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 290 bits (742), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 174/526 (33%), Positives = 285/526 (54%), Gaps = 49/526 (9%)
Query: 53 YILAKLLAFYVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDK 112
+ L K++A V SG + A +VF +T WN ++ G S+ P + + + Q+ D+
Sbjct: 62 FPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIG--ISKDPSRMMEAH-QLFDE 118
Query: 113 ETEPDEYTYSFLLSVCARCGLFREGEQVHGRV----------LASGYCSN---------- 152
EPD ++Y+ +LS R F + + R+ + +GY
Sbjct: 119 IPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELF 178
Query: 153 -VFIRTNLMNLYLMSGG--ECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWK 208
+ N ++ M G ECG + A F P R VV+W +++ GY+K ++ A
Sbjct: 179 YSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEA 238
Query: 209 IFDEMP-HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIG 267
+F +M ++N+V+W MISG +N + L LF M + + L +AL C+E+
Sbjct: 239 MFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELS 298
Query: 268 DLKLGKWIHSYVEENFSVGREPVLVSLNNALIHMYASCGEIEEAYGVFRKMQRRNTVSWT 327
L+LG+ IH V ++ L SL I MY CGE+ +A+ +F M++++ V+W
Sbjct: 299 ALQLGRQIHQIVSKSTLCNDVTALTSL----ISMYCKCGELGDAWKLFEVMKKKDVVAWN 354
Query: 328 SMITGFAKQGYAQEAL---------------LTFLGVLSACSHGGFVDEGRQFFECMNQN 372
+MI+G+A+ G A +AL +TF+ VL AC+H G V+ G +FE M ++
Sbjct: 355 AMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRD 414
Query: 373 WGIKPRIEHYGCMVDLFSRAGLMDEAFSLVQNMPMKPNDAVLGSLLLGCRIHNNAELASQ 432
+ ++P+ +HY CMVDL RAG ++EA L+++MP +P+ AV G+LL CR+H N ELA
Sbjct: 415 YKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEF 474
Query: 433 VAQKLVAEIDPEQAAGYLALVANVYAAAKRWQDVAAVRQKMIKMGVRKPPGQSWVQINGV 492
A+KL+ +++ + AAGY+ L AN+YA+ RW+DVA VR++M + V K PG SW++I
Sbjct: 475 AAEKLL-QLNSQNAAGYVQL-ANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNK 532
Query: 493 LHDFVAGDSTYKQASLIYKTLGEITMQAMQEGYKPDISELFLGIEE 538
+H F + D + + I+K L E+ + GYKP++ +EE
Sbjct: 533 VHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEE 578
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Query: 2 LVEEIIPANPATSSKALTTRQIFSLLQIRNTTKTLFQIHSQIIINGFSQKNYILAKLLAF 61
++EE I N + S AL S LQ+ QIH + + L L++
Sbjct: 275 MLEEGIRPNSSGLSSALLGCSELSALQLGR------QIHQIVSKSTLCNDVTALTSLISM 328
Query: 62 YVTSGYLINAHKVFEKTENPSTAIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTY 121
Y G L +A K+FE + WN MI G+A+ +K++ L+++MID + PD T+
Sbjct: 329 YCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITF 388
Query: 122 SFLLSVCARCGLFREG 137
+L C GL G
Sbjct: 389 VAVLLACNHAGLVNIG 404
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 192,946,247
Number of Sequences: 539616
Number of extensions: 7665729
Number of successful extensions: 24784
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 352
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 17419
Number of HSP's gapped (non-prelim): 2056
length of query: 538
length of database: 191,569,459
effective HSP length: 122
effective length of query: 416
effective length of database: 125,736,307
effective search space: 52306303712
effective search space used: 52306303712
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)