Query 044993
Match_columns 713
No_of_seqs 360 out of 2753
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 15:19:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044993.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044993hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 8E-121 3E-125 1047.3 52.5 622 50-711 1-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 9E-113 3E-117 983.8 52.7 611 50-711 1-620 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 2E-81 7E-86 751.1 44.4 534 67-712 6-607 (926)
4 3afg_A Subtilisin-like serine 100.0 1.6E-60 5.4E-65 538.8 37.1 342 5-565 59-418 (539)
5 2z2z_A TK-subtilisin precursor 100.0 5.6E-57 1.9E-61 493.9 20.8 325 4-565 22-392 (395)
6 3t41_A Epidermin leader peptid 100.0 5.8E-55 2E-59 490.0 26.8 335 4-565 64-465 (471)
7 1y9z_A Alkaline serine proteas 100.0 4E-54 1.4E-58 478.0 20.3 372 67-586 13-437 (441)
8 1r6v_A Subtilisin-like serine 100.0 9.3E-53 3.2E-57 480.7 25.9 362 5-576 52-450 (671)
9 1r0r_E Subtilisin carlsberg; h 100.0 2.2E-52 7.4E-57 435.0 22.4 258 67-564 13-274 (274)
10 1gci_A Subtilisin; hydrolase, 100.0 3.4E-52 1.2E-56 431.9 23.5 257 67-564 13-269 (269)
11 1to2_E Subtilisin BPN'; serine 100.0 6.8E-52 2.3E-56 432.6 23.3 260 67-565 13-276 (281)
12 1dbi_A AK.1 serine protease; h 100.0 1.5E-51 5E-56 429.9 23.9 260 67-564 20-279 (280)
13 2x8j_A Intracellular subtilisi 100.0 1.4E-51 4.7E-56 439.4 20.6 266 67-565 30-311 (327)
14 1thm_A Thermitase; hydrolase(s 100.0 6.6E-51 2.3E-55 424.9 24.0 259 67-564 20-278 (279)
15 4h6x_A Thiazoline oxidase/subt 100.0 1.1E-52 3.8E-57 453.5 10.0 313 68-564 21-337 (357)
16 2p4e_P Proprotein convertase s 100.0 6.2E-53 2.1E-57 478.8 4.2 308 6-533 109-423 (692)
17 2ixt_A 36KDA protease; serine 100.0 6.1E-50 2.1E-54 424.8 24.5 282 67-559 15-309 (310)
18 2z30_A TK-subtilisin; thermoco 100.0 2E-50 6.7E-55 429.9 19.1 266 67-565 17-317 (320)
19 3zxy_A Subtilisin-like protein 100.0 1.4E-50 4.8E-55 423.7 15.2 267 74-564 3-274 (282)
20 3lxu_X Tripeptidyl-peptidase 2 100.0 7.1E-49 2.4E-53 466.1 28.7 356 157-711 267-653 (1354)
21 4h6w_A N-terminal cyanobactin 100.0 5.1E-50 1.7E-54 424.8 15.3 274 68-565 11-288 (306)
22 1wmd_A Protease; alpha-beta hy 100.0 4.1E-49 1.4E-53 437.3 21.7 295 67-566 10-319 (434)
23 2iy9_A SUBA; toxin, shiga, pla 100.0 7.9E-50 2.7E-54 430.6 15.5 271 67-565 32-329 (347)
24 3lpc_A APRB2; protease, subtil 100.0 1.8E-48 6.2E-53 419.0 20.1 300 65-565 19-337 (340)
25 2oxa_A Extracellular serine pr 100.0 4.2E-48 1.4E-52 445.4 21.5 302 65-570 57-430 (600)
26 1sh7_A Extracellular subtilisi 100.0 3.3E-47 1.1E-51 397.3 24.0 237 67-533 18-257 (284)
27 2b6n_A Proteinase K; S binding 100.0 1E-46 3.4E-51 393.1 23.4 238 67-532 20-260 (278)
28 4dzt_A Aqualysin-1, aqualysin- 100.0 1.4E-46 4.8E-51 392.1 22.0 237 67-533 20-259 (276)
29 1p8j_A Furin precursor; prohor 100.0 4.8E-46 1.6E-50 416.3 26.5 295 65-567 25-332 (471)
30 2pwa_A Proteinase K; structure 100.0 1.2E-46 4.1E-51 392.1 19.5 240 70-559 24-271 (279)
31 2id4_A Kexin; KEX2, kexin, fur 100.0 9.6E-46 3.3E-50 416.5 24.4 287 65-567 41-344 (503)
32 3f7m_A Alkaline serine proteas 100.0 2.6E-45 9E-50 383.1 18.0 230 69-533 24-261 (279)
33 3hjr_A Extracellular serine pr 100.0 4.2E-44 1.4E-48 413.6 27.8 299 65-566 57-426 (600)
34 2qtw_B Proprotein convertase s 100.0 1.4E-44 4.9E-49 400.3 20.2 248 69-533 17-271 (546)
35 1t1e_A Kumamolisin; proenzyme, 99.9 5.3E-25 1.8E-29 248.3 7.2 97 188-299 273-383 (552)
36 1ga6_A Serine-carboxyl protein 99.8 1.8E-21 6.2E-26 209.3 11.1 100 191-300 91-207 (372)
37 3edy_A Tripeptidyl-peptidase 1 98.9 3.3E-09 1.1E-13 118.8 9.7 76 223-299 284-374 (544)
38 3cnq_P Subtilisin BPN'; unclea 98.2 1.6E-06 5.4E-11 71.5 5.2 48 4-52 32-79 (80)
39 2w2n_P Proprotein convertase s 97.9 5.2E-06 1.8E-10 73.2 4.3 45 4-48 69-113 (114)
40 3icu_A E3 ubiquitin-protein li 97.6 0.00023 7.9E-09 68.2 10.5 85 345-429 82-187 (194)
41 2qtw_A Proprotein convertase s 97.6 3.7E-05 1.3E-09 68.6 4.2 44 5-48 80-123 (124)
42 1v5i_B POIA1, IA-1=serine prot 97.3 0.00023 7.9E-09 57.7 4.7 44 5-48 29-75 (76)
43 2z30_B TK-subtilisin; thermoco 96.7 0.0016 5.6E-08 50.8 4.4 44 3-47 20-63 (65)
44 2ys4_A Hydrocephalus-inducing 94.9 0.077 2.6E-06 46.8 8.1 72 623-706 41-114 (122)
45 2ek8_A Aminopeptidase; metallo 92.7 0.31 1.1E-05 52.8 9.3 63 354-416 108-182 (421)
46 3iib_A Peptidase M28; YP_92679 90.3 0.59 2E-05 50.9 8.5 73 356-428 124-226 (444)
47 3qbt_B Inositol polyphosphate 89.8 3.2 0.00011 37.3 11.5 88 623-711 43-138 (140)
48 3lxu_X Tripeptidyl-peptidase 2 88.2 0.2 7E-06 60.8 3.0 24 74-97 32-55 (1354)
49 2e6j_A Hydin protein; PAPD, st 86.1 1.2 4E-05 38.2 6.0 55 623-678 26-82 (112)
50 3fed_A Glutamate carboxypeptid 84.5 0.92 3.1E-05 52.2 5.7 62 356-417 150-268 (707)
51 3kas_A Transferrin receptor pr 83.1 1.5 5.2E-05 49.8 6.6 60 357-416 128-230 (640)
52 2r39_A FIXG-related protein; s 82.3 5.6 0.00019 34.4 8.7 53 624-678 32-85 (118)
53 1y9z_A Alkaline serine proteas 82.2 0.84 2.9E-05 49.6 4.0 31 435-473 181-211 (441)
54 3qis_A Inositol polyphosphate 72.8 32 0.0011 36.0 12.7 87 623-710 46-140 (366)
55 2qsv_A Uncharacterized protein 70.9 16 0.00055 35.2 9.3 78 623-708 19-103 (220)
56 3idu_A Uncharacterized protein 62.0 39 0.0013 29.5 9.0 50 623-676 33-84 (127)
57 3zyz_A Beta-D-glucoside glucoh 52.5 36 0.0012 39.0 9.1 56 623-679 613-676 (713)
58 1w8o_A Bacterial sialidase; 3D 48.3 1E+02 0.0034 34.2 12.0 63 612-678 363-427 (601)
59 2x41_A Beta-glucosidase; hydro 47.9 35 0.0012 39.3 8.0 56 623-679 615-679 (721)
60 1wgl_A TOLL-interacting protei 43.9 16 0.00054 27.4 2.9 34 496-529 3-36 (59)
61 3sd2_A Putative member of DUF3 43.0 1.2E+02 0.0041 25.2 8.2 64 615-694 35-99 (101)
62 1z9l_A Vesicle-associated memb 42.4 66 0.0022 27.9 7.3 52 623-677 27-79 (128)
63 2qsv_A Uncharacterized protein 40.3 1.2E+02 0.0039 29.0 9.4 77 623-707 134-217 (220)
64 3abz_A Beta-glucosidase I; gly 39.4 83 0.0028 36.8 9.5 44 488-531 618-662 (845)
65 1msp_A MSP, major sperm protei 36.5 83 0.0029 27.2 6.9 50 624-676 26-76 (126)
66 1m1s_A WR4; structural genomic 35.7 1.3E+02 0.0045 25.6 7.9 50 625-677 25-75 (116)
67 1wic_A Hypothetical protein ri 34.7 97 0.0033 27.8 7.3 52 623-677 35-87 (152)
68 1row_A SSP-19, MSP-domain prot 32.6 1.4E+02 0.0047 25.1 7.4 49 626-677 18-67 (109)
69 2kq1_A BH0266 protein; solutio 30.6 13 0.00045 32.1 0.6 52 626-678 56-111 (119)
70 2cri_A Vesicle-associated memb 28.8 90 0.0031 27.8 6.0 52 623-677 31-83 (147)
71 1ni7_A ER75, hypothetical prot 28.7 41 0.0014 30.5 3.6 33 491-524 78-110 (155)
72 3isy_A Bsupi, intracellular pr 27.8 2.7E+02 0.0092 23.9 8.5 53 622-675 17-87 (120)
73 2l0d_A Cell surface protein; s 25.7 2.1E+02 0.0072 24.2 7.4 23 623-645 19-43 (114)
74 3g0m_A Cysteine desulfuration 24.6 39 0.0013 30.1 2.6 33 490-523 70-102 (141)
75 1otr_A Protein CUE2; protein-p 21.3 84 0.0029 22.5 3.3 24 505-528 7-30 (49)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=8.3e-121 Score=1047.34 Aligned_cols=622 Identities=37% Similarity=0.638 Sum_probs=559.5
Q ss_pred CCCCccccCCCcCCCCCCccccccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCc-cccccccee
Q 044993 50 TTGAWNFLGLEKDNVIPSNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYG-VECNRKLIG 128 (713)
Q Consensus 50 ~~~s~~~~g~~~~~~~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~-~~~n~ki~g 128 (713)
++++|+|+|+... ..+|..+.+|+||+|||||||||++||+|.+.++.|+|.+|+|.|+.+.+|+ ..||+|+++
T Consensus 1 Tt~s~~flgl~~~-----~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig 75 (649)
T 3i6s_A 1 TTHTSDFLKLNPS-----SGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIG 75 (649)
T ss_dssp CCSHHHHTTCCSS-----SSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEE
T ss_pred CCCChHHcCCCCc-----hhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceee
Confidence 5789999999842 4799999999999999999999999999999999999999999999999998 899999999
Q ss_pred eeecccchhhhhcCCCCCCCCCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCC
Q 044993 129 IRHYNKGLISAATKRNPAFDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSE 208 (713)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~ 208 (713)
+++|.+++.... + +...+..+++|..||||||||||||+.+.+.+.+| ++.|.++||||+|+|++||+|+..
T Consensus 76 ~~~f~~~~~~~~----~--~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G-~~~g~~~GvAP~A~l~~~kv~~~~- 147 (649)
T 3i6s_A 76 ANYFNKGILAND----P--TVNITMNSARDTDGHGTHCASITAGNFAKGVSHFG-YAPGTARGVAPRARLAVYKFSFNE- 147 (649)
T ss_dssp EEECCHHHHHHC----T--TCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETT-EEEEEECCSSTTCEEEEEECEETT-
T ss_pred eEeccCcccccc----c--ccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccc-cccCceeEECCCCEEEEEeccCCC-
Confidence 999998765441 1 12334567889999999999999999888888888 888899999999999999999976
Q ss_pred CccCCCCCCCCCHHHHHHHHHHHHHcCCCeeEeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCCCCccCCC
Q 044993 209 DDHNAAHGNDCMEQDTIEAFDDAIHDGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTINNMA 288 (713)
Q Consensus 209 ~~~~~~~gg~~~~~~i~~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~a 288 (713)
+|..+++++||++|+++|+||||||||.. ...+..+++.+++++|+++||+||+||||+|+...++.+.+
T Consensus 148 ---------g~~~~~i~~Ai~~A~~~gvdVIn~SlG~~-~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~a 217 (649)
T 3i6s_A 148 ---------GTFTSDLIAAMDQAVADGVDMISISYGYR-FIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGS 217 (649)
T ss_dssp ---------EECHHHHHHHHHHHHHTTCSEEEECCCCC-SCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCC
T ss_pred ---------CCCHHHHHHHHHHHHHcCCCEEEeCCccC-CcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCC
Confidence 59999999999999999999999999987 45677889999999999999999999999999999999999
Q ss_pred CccEEeccccCCceeEEEEEeCCceEEeecccc-cCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccc--cCeEEE
Q 044993 289 PWMLTVGASTMDREFAGYITLGNNKRLRGASLS-VDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKV--QGRILV 365 (713)
Q Consensus 289 p~vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~-~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~--~gkivl 365 (713)
||+|+|||++.||.|...+.+++++++.|++++ .......+||++.. ....|.+..++..++ +|||||
T Consensus 218 p~vitVgAst~dr~f~~~~~lgng~~~~g~sl~~~~~~~~~~plv~~~---------~~~~C~~~~l~~~~vdl~GkIvl 288 (649)
T 3i6s_A 218 PWILCVASGHTDRTFAGTLTLGNGLKIRGWSLFPARAFVRDSPVIYNK---------TLSDCSSEELLSQVENPENTIVI 288 (649)
T ss_dssp TTSEEEEEEECSCEEEEEEEETTSCEEEEECCCSSCBCEEEEEEECCT---------TTTTCCCHHHHTTSSSGGGCEEE
T ss_pred CceEEEeeeecccceeeEEEeCCCcEEeeeecccCcccCcceeeEecc---------cccccccccccccccccCCcEEE
Confidence 999999999999999999999999999999998 44446789999974 457899988888877 999999
Q ss_pred EEe-----chhhHHHhhcCceEEEEccCC-cccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCc
Q 044993 366 CLH-----EEKGYEAAKKGAVAMITGASG-TFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPA 439 (713)
Q Consensus 366 ~~~-----~~k~~~~~~~Ga~g~i~~~~g-~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 439 (713)
|.| .+|..+++++|+.|+|+.++. .+..+.+.+|+++|+.++++.|++|++++.+++++|.+..+..+..+.+.
T Consensus 289 c~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~ 368 (649)
T 3i6s_A 289 CDDNGDFSDQMRIITRARLKAAIFISEDPGVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPV 368 (649)
T ss_dssp ECCCSCHHHHHHHHHHHTCSEEEEECCCGGGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCE
T ss_pred EeCCCccHHHHHHHHHhcCceEEEEecCccccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCc
Confidence 998 689999999999999994333 56667889999999999999999999999999999999999988888999
Q ss_pred cccccCCCCCCCCCCCCCCceeeCCCcEEeeecCCCCCCCCcCCC-CccceeeeccccchhhHHHHHHHHHHHhCCCCCH
Q 044993 440 VASFSSRGPNRIDPSIIKPDVIAPGVNIVAAYTSERGPTGYARDN-RRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSP 518 (713)
Q Consensus 440 ~a~fSS~GPt~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~-~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp 518 (713)
++.||||||+...++++||||+|||++|+++++..........+. ....|..+||||||||||||+||||||+||+|+|
T Consensus 369 va~FSSrGP~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Sp 448 (649)
T 3i6s_A 369 VAASSARGPSRSYLGISKPDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSP 448 (649)
T ss_dssp ECTTSCCSSCTTCTTSCSCCEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCH
T ss_pred ccccCCCCCCCCCCCccCCeEEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCH
Confidence 999999999987789999999999999999999865443333222 3358999999999999999999999999999999
Q ss_pred HHHHHHHHhcccccCCCCCccccC-CCCCCCCCccCccccCccCcCCCCeeecCCccccccccccCCCccceeeeeecCC
Q 044993 519 AAIKSAIMTTARATDANNKPISEF-NGKEATAFAYGSGHVDPNSALDPGLVYDLTLDDYLGYLCNRGYKEDVVKKFVVDP 597 (713)
Q Consensus 519 ~~ik~~L~~TA~~~~~~g~~~~~~-~~~~~~~~~~G~G~id~~~A~~~~lv~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 597 (713)
++||++||+||.++++.+.++.+. .+.+++++.||+|+||+.+|++||||||+..+||+.|||++||+.++|+.|++.+
T Consensus 449 a~IksaLmtTA~~~~~~g~~i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~ 528 (649)
T 3i6s_A 449 SAIRSAMMTTADPLDNTRKPIKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSS 528 (649)
T ss_dssp HHHHHHHHHTCBCBCTTSSBCEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTT
T ss_pred HHHHHHHhcccccccCCCCcccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecCC
Confidence 999999999999999999998875 4678899999999999999999999999999999999999999999999999876
Q ss_pred CCCC--CCCCCCCCCCCCceEEeec-CCce-----EEEEEEEEecCC-CceEEEEEeCCCceeEEEecCeEEEecCCcEE
Q 044993 598 AKHP--CPKSFELANFNYPSIAIPE-LAGS-----VTVTRKLKNVGT-PGTYKAQVKEIPGISTDVEPSSLTFTHVNEEK 668 (713)
Q Consensus 598 ~~~~--~~~~~~~~~ln~ps~~~~~-~~~~-----~t~~~tvtn~~~-~~ty~~~~~~~~g~~v~~~p~~l~~~~~g~~~ 668 (713)
+. |+. ...+||||||++.. +... ++|+|||||||. ..+|++.++.|.|++|+|+|++|+|++.+|++
T Consensus 529 --~~~~C~~--~~~~lNyPs~~~~~~~~~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~ 604 (649)
T 3i6s_A 529 --ASHNCSN--PSADLNYPSFIALYSIEGNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQ 604 (649)
T ss_dssp --SCC-CCC--CCCCCCCSSEEEEECCSSCCCCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEE
T ss_pred --CcCCCCC--chhhcCCCcEEeecccCCCCccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEE
Confidence 77 986 56799999999987 5555 899999999999 89999999999999999999999998889999
Q ss_pred EEEEEEEeccCCCCCCCCCeEEEEEEEEc--CCcEEEeeEEEEee
Q 044993 669 TFKITFTLAQNAKPNATNDYVFGELIWSD--GTHRVRSPIALKQK 711 (713)
Q Consensus 669 ~~~v~~~~~~~~~~~~~~~~~~G~l~~~~--~~~~v~~P~~~~~~ 711 (713)
+|+|||+... .....|.||+|+|++ +.|.||+||+|+..
T Consensus 605 ~f~v~~~~~~----~~~~~~~fg~l~w~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 605 SYTLTIRYIG----DEGQSRNVGSITWVEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp EEEEEEEECC----C---CCCEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred EEEEEEEecc----cCCCceEEEEEEEEcCCCCeEEEEeEEEEEc
Confidence 9999999865 345678999999999 89999999999875
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=9.3e-113 Score=983.81 Aligned_cols=611 Identities=39% Similarity=0.700 Sum_probs=513.5
Q ss_pred CCCCccccCCCcCCCCCCccccccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceee
Q 044993 50 TTGAWNFLGLEKDNVIPSNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGI 129 (713)
Q Consensus 50 ~~~s~~~~g~~~~~~~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~ 129 (713)
++++|+|+|++ ..+|.+..+|+||+|||||||||++||+|+|+++.|++.+|+|.|+.+.+| .||+|++++
T Consensus 1 tt~s~~flGl~-------~~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~--~~n~k~ig~ 71 (621)
T 3vta_A 1 TTRSWDFLGFP-------LTVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNF--RCNRKIIGA 71 (621)
T ss_dssp CCSHHHHTTCC-------TTCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSC--CCCSSEEEE
T ss_pred CCCChhHcCCC-------ccccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCc--ccCcceeee
Confidence 57899999997 368989999999999999999999999999999999999999999999988 899999999
Q ss_pred eecccchhhhhcCCCCCCCCCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCC
Q 044993 130 RHYNKGLISAATKRNPAFDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSED 209 (713)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~ 209 (713)
++|..++... ..+..+|+|.+||||||||||||+...+.+..| ...+.++||||+|+|++||+|++.
T Consensus 72 ~~~~~~~~~~----------~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g-~~~g~~~GvAP~A~l~~~kv~~~~-- 138 (621)
T 3vta_A 72 RSYHIGRPIS----------PGDVNGPRDTNGHGTHTASTAAGGLVSQANLYG-LGLGTARGGVPLARIAAYKVCWND-- 138 (621)
T ss_dssp EECCCSSSCC----------TTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETT-EEEEEECCSCTTSEEEEEECEETT--
T ss_pred eecccCCccC----------CCCCCCCCCCCcCHHHHHHHHhCcCCCCccccc-cccccEEEECCCCEEEEEEeecCC--
Confidence 9998664322 234567899999999999999999888787777 778889999999999999999987
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHHcCCCeeEeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCCCCccCCCC
Q 044993 210 DHNAAHGNDCMEQDTIEAFDDAIHDGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTINNMAP 289 (713)
Q Consensus 210 ~~~~~~gg~~~~~~i~~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap 289 (713)
+|..+++++||++|+++|+||||||||+..+.++..+++++++++|+++||+||+||||+|+...++.+.+|
T Consensus 139 --------g~~~~di~~a~~~a~~~g~dVin~SlG~~~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~ 210 (621)
T 3vta_A 139 --------GCSDTDILAAYDDAIADGVDIISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSP 210 (621)
T ss_dssp --------EECHHHHHHHHHHHHHHTCSEEEECCCCCCGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCT
T ss_pred --------CCCHHHHHHHHHHHHHhCCCEEEecCCCCCCCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCC
Confidence 689999999999999999999999999986566778899999999999999999999999999999999999
Q ss_pred ccEEeccccCCceeEEEEEeCCceEEeecccccCCCCCceeeEeccccccccCc-CCCCCCCCCCCCcccccCeEEEEEe
Q 044993 290 WMLTVGASTMDREFAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANAT-DKDASCKPGTLDRKKVQGRILVCLH 368 (713)
Q Consensus 290 ~vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~-~~~~~c~~~~~~~~~~~gkivl~~~ 368 (713)
|+++|++++.++.|...+.++++..+.+.++.. .....+++++..+....... .....|.+..++..+++|||++|.+
T Consensus 211 ~~~~v~ast~d~~~~~~~~~~~~~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~ 289 (621)
T 3vta_A 211 WLLSVAASTMDRKFVTQVQIGNGQSFQGVSINT-FDNQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEA 289 (621)
T ss_dssp TSEEEEEECCSEEEEEEEEETTSCEEEEBCCCC-SCCEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSS
T ss_pred CceeEEEeeccccceeeEEeccCceeeeeeccc-CCCcccccccccccccccccccccccccccccccccccceEEEEec
Confidence 999999999999999999999999998888762 12456677776554433222 3456799999999999999999998
Q ss_pred --chhhHHHhhcCceEEEEccCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCccccccCC
Q 044993 369 --EEKGYEAAKKGAVAMITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSR 446 (713)
Q Consensus 369 --~~k~~~~~~~Ga~g~i~~~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~ 446 (713)
..+....+..|+.++|+..+.....+.+.+|...++..++..++.|+..+..+.+.+....+. .....+.++.||||
T Consensus 290 ~~~~~~~~~~~~Ga~gvi~~~~~~~~~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~~-~~~~~~~va~FSSr 368 (621)
T 3vta_A 290 SFGPHEFFKSLDGAAGVLMTSNTRDYADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTI-LNASAPVVVSFSSR 368 (621)
T ss_dssp CCCHHHHHHHHTTCSEEEEECSCCSSCCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEEE-ECTTCCCBCTTSCC
T ss_pred CCChhHHhhhhcceeEEEEEecCCCcccccccceEEECHHHHHHHHHHHhccCCcceEEecceEe-ccCCCCceeeecCC
Confidence 677788889999999994433333456789999999999999999999999988888665544 34568899999999
Q ss_pred CCCCCCCCCCCCceeeCCCcEEeeecCCCCCCCCcCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 044993 447 GPNRIDPSIIKPDVIAPGVNIVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIM 526 (713)
Q Consensus 447 GPt~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~ 526 (713)
||+...++++||||+|||++|+|+++....... ......|..|||||||||||||+||||||+||+|+|++||++||
T Consensus 369 GP~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~---~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLm 445 (621)
T 3vta_A 369 GPNRATKDVIKPDISGPGVEILAAWPSVAPVGG---IRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALM 445 (621)
T ss_dssp CSCTTCTTSCSCCEEEECSSEEEECCSSSCBTT---BCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHH
T ss_pred CCCCCCCCeeccccccCCcceEeecCccccccC---cCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHH
Confidence 999877899999999999999999987543322 23345899999999999999999999999999999999999999
Q ss_pred hcccccCCCCCccccCCCCCCCCCccCccccCccCcCCCCeeecCCccccccccccCCCccceeeeeecCCCCCCCCCCC
Q 044993 527 TTARATDANNKPISEFNGKEATAFAYGSGHVDPNSALDPGLVYDLTLDDYLGYLCNRGYKEDVVKKFVVDPAKHPCPKSF 606 (713)
Q Consensus 527 ~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~id~~~A~~~~lv~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (713)
+||++++..+ .++.+++||+|+||+.+|++||||||+..+||+.|||+++|+.++++.+++.. ..|+...
T Consensus 446 tTA~~~~~~~--------~~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~~--~~~~~~~ 515 (621)
T 3vta_A 446 TTASPMNARF--------NPQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDY--SACTSGN 515 (621)
T ss_dssp HTCBCCCTTT--------CTTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC-----------------------------
T ss_pred hcCCcccccC--------CCCCchhcCCCccCHHHhcCCCeEeecccchhhhhhcccCCCchhheeeeccc--cccCCCC
Confidence 9999886543 35678999999999999999999999999999999999999999999999876 7887643
Q ss_pred --CCCCCCCceEEee---cCCceEEEEEEEEecCC-CceEEEEEeCCCceeEEEecCeEEEecCCcEEEEEEEEEeccCC
Q 044993 607 --ELANFNYPSIAIP---ELAGSVTVTRKLKNVGT-PGTYKAQVKEIPGISTDVEPSSLTFTHVNEEKTFKITFTLAQNA 680 (713)
Q Consensus 607 --~~~~ln~ps~~~~---~~~~~~t~~~tvtn~~~-~~ty~~~~~~~~g~~v~~~p~~l~~~~~g~~~~~~v~~~~~~~~ 680 (713)
...+||||||++. ++..+++|+|||||++. ..||+++++.|.|++|+|+|++|+|++.+|+++|+|||+.
T Consensus 516 ~~~~~~lN~pS~~v~~~~~~~~~~t~~rtvtnvg~~~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~---- 591 (621)
T 3vta_A 516 TGRVWDLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRG---- 591 (621)
T ss_dssp --CGGGSCCSSEEEECCSSCCEEEEEEEEEEECSSSCEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEEE----
T ss_pred cCcccccccccEEEEccCCCceEEEEEEEEEccCCCCeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEEe----
Confidence 5789999999985 44478999999999999 9999999999999999999999999888999999999976
Q ss_pred CCCCCCCeEEEEEEEEcCCcEEEeeEEEEee
Q 044993 681 KPNATNDYVFGELIWSDGTHRVRSPIALKQK 711 (713)
Q Consensus 681 ~~~~~~~~~~G~l~~~~~~~~v~~P~~~~~~ 711 (713)
..++.|+||+|+|+|+.|.||+||+|+..
T Consensus 592 --~~~~~~~~g~l~w~d~~h~Vr~Pi~v~~~ 620 (621)
T 3vta_A 592 --SIKGFVVSASLVWSDGVHYVRSPITITSL 620 (621)
T ss_dssp --CCCSSEEEEEEEEECSSCCCEEEEEEECC
T ss_pred --cCCCceEEEEEEEEcCCEEEEeCEEEEEe
Confidence 35678999999999999999999999863
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=2e-81 Score=751.09 Aligned_cols=534 Identities=22% Similarity=0.305 Sum_probs=415.4
Q ss_pred CccccccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCC-----------Ccccccccceeeeecccc
Q 044993 67 SNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDH-----------YGVECNRKLIGIRHYNKG 135 (713)
Q Consensus 67 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~-----------f~~~~n~ki~g~~~~~~~ 135 (713)
++.+|..+++|+||+|||||||||++||+|++ +..|++.|..+.. +..+||+|++++++|.++
T Consensus 6 ~~~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~------~~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~~~ 79 (926)
T 1xf1_A 6 VKTLQEKAGKGAGTVVAVIDAGFDKNHEAWRL------TDKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYSKD 79 (926)
T ss_dssp CHHHHHHHCSCTTCEEEEEESCCTTCCCCCSC------CSCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESCCC
T ss_pred cHHHHhccCCCCCcEEEEEecCCCCCCHhHcC------CCCCcccccchhhhcccccccCcccccccCcccceeeccccC
Confidence 45899999999999999999999999999974 3567777653322 225799999999998654
Q ss_pred hhhhhcCCCCCCCCCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCC
Q 044993 136 LISAATKRNPAFDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAH 215 (713)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~ 215 (713)
. .++ |..||||||||||||+.....+. .+.+.||||+|+|++||+|+...
T Consensus 80 ~-----------------~~~-D~~gHGThVAgiiAg~~~~~~~~-----~~~~~GvAP~A~l~~~kv~~~~g------- 129 (926)
T 1xf1_A 80 G-----------------KTA-VDQEHGTHVSGILSGNAPSETKE-----PYRLEGAMPEAQLLLMRVEIVNG------- 129 (926)
T ss_dssp S-----------------CCC-CSSTTTTHHHHSSCCCCCCCCSC-----SCCTTTTCTTSEEEEEECCCCSC-------
T ss_pred C-----------------CCC-CCCCcHHHHHHHHhCCCccCccc-----CCceEEECCCCEEEEEEeecCCC-------
Confidence 1 122 78999999999999986543221 14589999999999999998751
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCeeEeecCCCCC-CCCCcchHHHHHHHHhcCCcEEEEecCCCCC-------------CC
Q 044993 216 GNDCMEQDTIEAFDDAIHDGVDIITVSLGYDNI-ADFLSDGVVIGAFHATMNGVLTVAASGNGGP-------------EP 281 (713)
Q Consensus 216 gg~~~~~~i~~ai~~a~~~gvdVIn~SlG~~~~-~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~-------------~~ 281 (713)
.+|..+++++||++|+++|+||||||||.... .....+++.+++++|+++||+||+||||+|+ ..
T Consensus 130 -~~~~~~~i~~Ai~~Ai~~gvdVIn~SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~ 208 (926)
T 1xf1_A 130 -LADYARNYAQAIRDAINLGAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDY 208 (926)
T ss_dssp -HHHHHHHHHHHHHHHHHTTCEEEEECCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCC
T ss_pred -CCCcHHHHHHHHHHHHHhCCcEEEECCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCc
Confidence 13667899999999999999999999998732 2345678899999999999999999999995 23
Q ss_pred CCccCC--CCccEEeccccCCceeEEEEEe-CCceEEeecccc--cCC-CCCceeeEeccccccccCcCCCCCCCCCCCC
Q 044993 282 QTINNM--APWMLTVGASTMDREFAGYITL-GNNKRLRGASLS--VDM-PRKSYPLISGEDARMANATDKDASCKPGTLD 355 (713)
Q Consensus 282 ~~~~~~--ap~vitVgA~~~~~~~~~~~~~-g~g~~~~g~~~~--~~~-~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~ 355 (713)
.++.++ +||+|+|||++.++.+...+.+ +++....+.++. ..+ ....+|+++... .|.+..+
T Consensus 209 ~tv~~PA~~~~vitVgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~-----------g~~~~~~- 276 (926)
T 1xf1_A 209 GVVGTPAAADSTLTVASYSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR-----------GTKEDDF- 276 (926)
T ss_dssp BCCCSCTTTCCSEEEEEEBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT-----------SCSTTTT-
T ss_pred ceecCcccCCceEEEeccccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC-----------CCCccch-
Confidence 345555 7999999999999999988887 665555555544 222 356899998743 3766555
Q ss_pred cccccCeEEEEEe-----chhhHHHhhcCceEEEE-cc-CC-cc--cccCCcccEEEeehhhHHHHHHHHhcCCCcEEEE
Q 044993 356 RKKVQGRILVCLH-----EEKGYEAAKKGAVAMIT-GA-SG-TF--SASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFM 425 (713)
Q Consensus 356 ~~~~~gkivl~~~-----~~k~~~~~~~Ga~g~i~-~~-~g-~~--~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i 425 (713)
.+++||||||+| .+|..+++++||.|+|+ +. .+ .. ......+|+.+++.+++..|.+ ....++++
T Consensus 277 -~~v~Gkivl~~rg~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~----~~~~ti~~ 351 (926)
T 1xf1_A 277 -KDVKGKIALIERGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD----NPQKTITF 351 (926)
T ss_dssp -TTCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH----CSSCEEEE
T ss_pred -hhcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh----CCceEEEe
Confidence 689999999999 67899999999999999 32 22 21 2346789999999999988874 34444444
Q ss_pred eecceeccccCCCccccccCCCCCCCCCCCCCCceeeCCCcEEeeecCCCCCCCCcCCCCccceeeeccccchhhHHHHH
Q 044993 426 TDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVIAPGVNIVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGI 505 (713)
Q Consensus 426 ~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~ 505 (713)
............+.++.||||||+. ++++||||+|||++|+++++.. .|..+||||||||||||+
T Consensus 352 ~~~~~~~~~~~~~~~a~FSSrGp~~--~~~lKPDI~APG~~I~sa~~~~-------------~y~~~SGTSMAaPhVAG~ 416 (926)
T 1xf1_A 352 NATPKVLPTASGTKLSRFSSWGLTA--DGNIKPDIAAPGQDILSSVANN-------------KYAKLSGTSMSAPLVAGI 416 (926)
T ss_dssp CSSCEEEECSSCSBCCTTSCCCBCT--TSCBSCCEEEECCCEEESSSCS-------------SSCEEESCTTHHHHHHHH
T ss_pred cccceecccCCcceeccccCCCCCC--CCccCceEECCCCCEEeeccCC-------------cceecCccchhHHHHHHH
Confidence 4333334455678999999999997 8999999999999999999863 899999999999999999
Q ss_pred HHHHHH----hCCCCCHHH----HHHHHHhcccccCCCCCccccCCCCCCCCCccCccccCccCcCCCCeeecCCccccc
Q 044993 506 AGLIKT----VHPDWSPAA----IKSAIMTTARATDANNKPISEFNGKEATAFAYGSGHVDPNSALDPGLVYDLTLDDYL 577 (713)
Q Consensus 506 aALl~q----~~p~~sp~~----ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~id~~~A~~~~lv~~~~~~d~~ 577 (713)
||||+| .||+|+|+| ||++||+||+++...+ ....+++++||+|+||+.+|+++.+
T Consensus 417 aALl~q~~k~~~P~~sp~~~~~~Iks~L~~TA~~~~~~~------~~~~~~~~~~G~G~vn~~~A~~~~~---------- 480 (926)
T 1xf1_A 417 MGLLQKQYETQYPDMTPSERLDLAKKVLMSSATALYDED------EKAYFSPRQQGAGAVDAKKASAATM---------- 480 (926)
T ss_dssp HHHHHHHHHHSSSSSHHHHHHHHHHHHHHHHSBCCEEGG------GTEECCHHHHTTCBCCHHHHHHCSE----------
T ss_pred HHHHHHHHhccCCCCCHHHHHHHHHHHHHhcCCCcccCC------CCccCChhccCCCccCHHHhcCCCe----------
Confidence 999965 599999997 9999999999875321 1235678999999999999999843
Q ss_pred cccccCCCccceeeeeecCCCCCCCCCCCCCCCCCCceEEeecCCceEEEEEEEEecCC-C--ceEEEEEeC--CCceeE
Q 044993 578 GYLCNRGYKEDVVKKFVVDPAKHPCPKSFELANFNYPSIAIPELAGSVTVTRKLKNVGT-P--GTYKAQVKE--IPGIST 652 (713)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~ps~~~~~~~~~~t~~~tvtn~~~-~--~ty~~~~~~--~~g~~v 652 (713)
|||..+++.. +|.+..+....+++|||||++. + .+|++.+.. |.+..+
T Consensus 481 -~l~~~~~~~~--------------------------~i~l~~~~~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~ 533 (926)
T 1xf1_A 481 -YVTDKDNTSS--------------------------KVHLNNVSDKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHF 533 (926)
T ss_dssp -EEEESSSSCS--------------------------CEEEEEECSEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEE
T ss_pred -EEEcCCCCcc--------------------------eeeccccCccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceE
Confidence 6787765433 2333444467899999999997 4 467777664 668888
Q ss_pred EEecCeEEEe-------cCCcEEEEEEEEEeccCCC----CCCCCCeEEEEEEEE--cCCcE-EEeeEEEEeec
Q 044993 653 DVEPSSLTFT-------HVNEEKTFKITFTLAQNAK----PNATNDYVFGELIWS--DGTHR-VRSPIALKQKS 712 (713)
Q Consensus 653 ~~~p~~l~~~-------~~g~~~~~~v~~~~~~~~~----~~~~~~~~~G~l~~~--~~~~~-v~~P~~~~~~~ 712 (713)
+++|..|.|. ++||+++|+|+|+...... ...++.|+||+|+|+ ++.|. ||+||+++..+
T Consensus 534 ~v~p~~l~~~~~~~vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~~v~~P~~~~~g~ 607 (926)
T 1xf1_A 534 ALAPKVLYETSWQKITIPANSSKQVTVPIDASRFSKDLLAQMKNGYFLEGFVRFKQDPTKEELMSIPYIGFRGD 607 (926)
T ss_dssp EEEEEEEEECCCEEEEECTTEEEEEEEEEECHHHHHHHHHHSTTCEEEEEEEEEESSTTSCCCEEEEEEEEESC
T ss_pred EeccceeEeccCCeEEECCCCEEEEEEEEEcCccchhhcccccCCcEEEEEEEEEeCCCCCCEEEeeeEEEecC
Confidence 8888766554 3499999999999852100 023557899999999 55565 99999998753
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=1.6e-60 Score=538.80 Aligned_cols=342 Identities=31% Similarity=0.439 Sum_probs=276.3
Q ss_pred ccceeEEecceeeeEEEEcCHHHHHHh-----------hCCCCeEEEEeccccccCCCCCccccCCC-cCCCCCCccccc
Q 044993 5 RELISSSYRRHINGFAADLEEEHAQQL-----------ANHPEVVSVFLNKPTKKLTTGAWNFLGLE-KDNVIPSNSTWE 72 (713)
Q Consensus 5 ~~~i~~~y~~~~ng~s~~~~~~~~~~L-----------~~~~~V~~V~~~~~~~~~~~~s~~~~g~~-~~~~~~~~~~~~ 72 (713)
..+++|+|+ .|+||+++++.+++++| +++|+|++|++++.+++.... .++. ...++.+..+|.
T Consensus 59 g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~~V~~v~~d~~~~~~~~~----~~~~~~~~~~~~~~~~~ 133 (539)
T 3afg_A 59 GAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQLSGVQFIQEDYVVKVAVET----EGLDESAAQVMATNMWN 133 (539)
T ss_dssp TCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCCCTTEEEEEECCEEECC---------------CCBCSCCBC
T ss_pred CCeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccccccCCCeeEEEecccccccCcc----ccCCccccccCcHhHHh
Confidence 468899997 79999999999999999 899999999999988774321 1111 011223458999
Q ss_pred cCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecccchhhhhcCCCCCCCCCCC
Q 044993 73 KARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRNPAFDIPPK 152 (713)
Q Consensus 73 ~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~ 152 (713)
.+++|+||+|||||||||++||+|.+ ++++.++|.++
T Consensus 134 ~g~~G~gv~VaViDtGid~~Hpdl~~--------------------------~i~~~~d~~~~----------------- 170 (539)
T 3afg_A 134 LGYDGSGITIGIIDTGIDASHPDLQG--------------------------KVIGWVDFVNG----------------- 170 (539)
T ss_dssp CSCCCTTCEEEEEESBCCTTSGGGTT--------------------------TEEEEEETTTC-----------------
T ss_pred cCCCCCCcEEEEEecCCCCCChHHhC--------------------------CEeeeEECCCC-----------------
Confidence 99999999999999999999999953 56666676543
Q ss_pred CCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCCCHHHHHHHHHHHH
Q 044993 153 LKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIEAFDDAI 232 (713)
Q Consensus 153 ~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~~~~i~~ai~~a~ 232 (713)
...+.|..||||||||||+|+... ..|.+.||||+|+|+.+|+++.. +.+..+++++||+||+
T Consensus 171 ~~~~~D~~gHGThVAgiiag~~~~--------~~g~~~GvAp~A~l~~~kv~~~~---------g~~~~~~i~~ai~~a~ 233 (539)
T 3afg_A 171 KTTPYDDNGHGTHVASIAAGTGAA--------SNGKYKGMAPGAKLVGIKVLNGQ---------GSGSISDIINGVDWAV 233 (539)
T ss_dssp CSSCCBSSSHHHHHHHHHHCCCGG--------GTTTTCCSCTTCEEEEEECSCTT---------SEEEHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHhCcCcc--------CCCCEEEECCCCEEEEEEeecCC---------CCcCHHHHHHHHHHHH
Confidence 224567899999999999997321 22447889999999999999876 3578899999999999
Q ss_pred Hc----CCCeeEeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCCCCccC--CCCccEEeccccCCceeEEE
Q 044993 233 HD----GVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTINN--MAPWMLTVGASTMDREFAGY 306 (713)
Q Consensus 233 ~~----gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~--~ap~vitVgA~~~~~~~~~~ 306 (713)
++ |++|||||||... .....+++..+++++.++|++||+||||+|+...++.. ..+++|+|||++.
T Consensus 234 ~~~~~~g~~Vin~SlG~~~-~~~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~~~~Pa~~~~vitVgA~~~------- 305 (539)
T 3afg_A 234 QNKDKYGIKVINLSLGSSQ-SSDGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYTVGSPAAASKVITVGAVDK------- 305 (539)
T ss_dssp HTHHHHTEEEEEECCCCCS-CCCSCSHHHHHHHHHHHTTCEEEEECCSCCSSSSCCCTTTTCSSSEEEEEECT-------
T ss_pred hhhhhcCCcEEEeCCCCCC-CCccchHHHHHHHHHHhcCCEEEEECCCCCCCCCcccCCccCCceEEEeeecC-------
Confidence 75 9999999999873 23456789999999999999999999999976555443 5689999998532
Q ss_pred EEeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccccCeEEEEEechhhHHHhhcCceEEEEc
Q 044993 307 ITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKGYEAAKKGAVAMITG 386 (713)
Q Consensus 307 ~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~k~~~~~~~Ga~g~i~~ 386 (713)
T Consensus 306 -------------------------------------------------------------------------------- 305 (539)
T 3afg_A 306 -------------------------------------------------------------------------------- 305 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCccccccCCCCCCCCCCCCCCceeeCCCc
Q 044993 387 ASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVIAPGVN 466 (713)
Q Consensus 387 ~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~KPDI~APG~~ 466 (713)
.+.++.||||||+. ++++||||+|||++
T Consensus 306 --------------------------------------------------~~~~a~fSs~Gp~~--~~~~kpdi~APG~~ 333 (539)
T 3afg_A 306 --------------------------------------------------YDVITDFSSRGPTA--DNRLKPEVVAPGNW 333 (539)
T ss_dssp --------------------------------------------------TSCBCSSSCCCCCT--TCBCCCSEEEECSS
T ss_pred --------------------------------------------------CcccccccCCCCCC--CCCCcccEecCcCC
Confidence 24678999999998 89999999999999
Q ss_pred EEeeecCCCCCCCCcCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCccccCCCCC
Q 044993 467 IVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTARATDANNKPISEFNGKE 546 (713)
Q Consensus 467 I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~ 546 (713)
|+++++...... +.....|..++|||||||||||++|||+|++|+|++.+||++|++||+++...+
T Consensus 334 I~s~~~~~~~~~----~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~s~~~vk~~L~~tA~~~~~~~---------- 399 (539)
T 3afg_A 334 IIAARASGTSMG----QPINDYYTAAPGTAMATPHVAGIAALLLQAHPSWTPDKVKTALIETADIVKPDE---------- 399 (539)
T ss_dssp EEEECCTTCCCS----EECSSSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSBCSSGGG----------
T ss_pred EEeeccCCCCCC----CCCcccccccCchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCC----------
Confidence 999986532110 111236999999999999999999999999999999999999999998864221
Q ss_pred CCCCccCccccCccCcCCC
Q 044993 547 ATAFAYGSGHVDPNSALDP 565 (713)
Q Consensus 547 ~~~~~~G~G~id~~~A~~~ 565 (713)
.+++.||+|+||+.+|++.
T Consensus 400 ~~~~~~G~G~vn~~~Al~~ 418 (539)
T 3afg_A 400 IADIAYGAGRVNAYKAAYY 418 (539)
T ss_dssp CSBTTTBTCBCCHHHHHTG
T ss_pred CCccCccCCccCHHHHhhh
Confidence 2567899999999999995
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=5.6e-57 Score=493.88 Aligned_cols=325 Identities=25% Similarity=0.362 Sum_probs=265.0
Q ss_pred cccceeEEecceeeeEEEEcCHHHHHHhhCCCCeEEEEeccccccCCCCCccc-----------cCCCcCCCCCCccccc
Q 044993 4 ARELISSSYRRHINGFAADLEEEHAQQLANHPEVVSVFLNKPTKKLTTGAWNF-----------LGLEKDNVIPSNSTWE 72 (713)
Q Consensus 4 ~~~~i~~~y~~~~ng~s~~~~~~~~~~L~~~~~V~~V~~~~~~~~~~~~s~~~-----------~g~~~~~~~~~~~~~~ 72 (713)
...+++++|. .|++|+++++.+++++|+++|+|++|++++.++++....+.. .++. .+.++.+|.
T Consensus 22 ~g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~---~i~~~~~w~ 97 (395)
T 2z2z_A 22 IGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVLLGKPSWLGGGSTQPAQTIPWGIE---RVKAPSVWS 97 (395)
T ss_dssp TTCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEEECCEEEECCEECC------CCSCCCCHHHH---HTTCGGGGG
T ss_pred cCCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEEEeeeecccCCCCcccccccCccccCCcchh---hcCHHHHHh
Confidence 4678999998 599999999999999999999999999999887653221110 0111 123568999
Q ss_pred cCCCCCc--cEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecccchhhhhcCCCCCCCCC
Q 044993 73 KARFGED--VIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRNPAFDIP 150 (713)
Q Consensus 73 ~~~~G~G--v~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~ 150 (713)
.+ +|+| |+|||||||||++||+|.+ ++...++|.++...
T Consensus 98 ~~-~G~g~~v~VaViDtGid~~Hp~l~~--------------------------~~~~~~~~~~~~~~------------ 138 (395)
T 2z2z_A 98 IT-DGSVSVIQVAVLDTGVDYDHPDLAA--------------------------NIAWCVSTLRGKVS------------ 138 (395)
T ss_dssp TC-SSCCTTCEEEEEESCBCTTCTTTGG--------------------------GEEEEEECGGGCCB------------
T ss_pred hc-CCCCCcEEEEEEcCCCCCCChhHhh--------------------------ccccCccccCCccc------------
Confidence 98 9999 9999999999999999963 34455555433100
Q ss_pred CCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCCCHHHHHHHHHH
Q 044993 151 PKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIEAFDD 230 (713)
Q Consensus 151 ~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~~~~i~~ai~~ 230 (713)
.+..++.|..||||||||||+|.. +..| +.||||+|+|+.+|+++.. +.+..+++++||+|
T Consensus 139 ~~~~~~~d~~gHGT~vAgiia~~~----n~~g------~~GvAp~a~l~~~kv~~~~---------g~~~~~~i~~ai~~ 199 (395)
T 2z2z_A 139 TKLRDCADQNGHGTHVIGTIAALN----NDIG------VVGVAPGVQIYSVRVLDAR---------GSGSYSDIAIGIEQ 199 (395)
T ss_dssp CCHHHHBCSSSHHHHHHHHHHCCC----SSSS------CCCSSTTCEEEEEECSCTT---------SEEEHHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHeec----CCCc------eEEECCCCEEEEEEEecCC---------CCccHHHHHHHHHH
Confidence 001124578999999999999972 3334 7889999999999999876 35778899999999
Q ss_pred HHHc--------------------CCCeeEeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCCCCccCCCCc
Q 044993 231 AIHD--------------------GVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTINNMAPW 290 (713)
Q Consensus 231 a~~~--------------------gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap~ 290 (713)
|+++ +++|||||||.. .....+..++.++.++|++||+||||+|......+...++
T Consensus 200 a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~----~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~ 275 (395)
T 2z2z_A 200 AILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGP----ADDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPE 275 (395)
T ss_dssp HHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBS----CCCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTT
T ss_pred HHhCccccccccccccccccccCCCCeEEEecCCCC----CCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccCCCC
Confidence 9998 999999999987 2345788889999999999999999999766666677899
Q ss_pred cEEeccccCCceeEEEEEeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccccCeEEEEEech
Q 044993 291 MLTVGASTMDREFAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEE 370 (713)
Q Consensus 291 vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~ 370 (713)
+|+|||++.
T Consensus 276 vi~Vga~~~----------------------------------------------------------------------- 284 (395)
T 2z2z_A 276 VIAVGAIDS----------------------------------------------------------------------- 284 (395)
T ss_dssp EEEEEEECT-----------------------------------------------------------------------
T ss_pred EEEEEEecC-----------------------------------------------------------------------
Confidence 999998542
Q ss_pred hhHHHhhcCceEEEEccCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCccccccCCCCCC
Q 044993 371 KGYEAAKKGAVAMITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNR 450 (713)
Q Consensus 371 k~~~~~~~Ga~g~i~~~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~ 450 (713)
.+.++.||++||
T Consensus 285 ------------------------------------------------------------------~~~~a~fS~~G~-- 296 (395)
T 2z2z_A 285 ------------------------------------------------------------------NDNIASFSNRQP-- 296 (395)
T ss_dssp ------------------------------------------------------------------TSCBCTTSCSSC--
T ss_pred ------------------------------------------------------------------CCCCCcccCCCC--
Confidence 256789999997
Q ss_pred CCCCCCCCceeeCCCcEEeeecCCCCCCCCcCCCCccceeeeccccchhhHHHHHHHHHHHhCC-------------CCC
Q 044993 451 IDPSIIKPDVIAPGVNIVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHP-------------DWS 517 (713)
Q Consensus 451 ~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p-------------~~s 517 (713)
+|+|||++|+++++.. .|..++|||||||||||++|||+|++| .|+
T Consensus 297 --------~v~APG~~i~s~~~~~-------------~y~~~sGTS~AaP~VaG~aAll~~~~p~~~~~~~~~~~~~~ls 355 (395)
T 2z2z_A 297 --------EVSAPGVDILSTYPDD-------------SYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDIS 355 (395)
T ss_dssp --------SEEEECSSEEEEETTT-------------EEEEEESHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCS
T ss_pred --------CEEeCCCCeeeecCCC-------------ceEecCCHHHHHHHHHHHHHHHHHhCccccccccccccccCCC
Confidence 6799999999999863 899999999999999999999999999 999
Q ss_pred HHHHHHHHHhcccccCCCCCccccCCCCCCCCCccCccccCccCcCCC
Q 044993 518 PAAIKSAIMTTARATDANNKPISEFNGKEATAFAYGSGHVDPNSALDP 565 (713)
Q Consensus 518 p~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~id~~~A~~~ 565 (713)
+.+||++|++||+++... ..+..||||+||+.+|++.
T Consensus 356 ~~~v~~~L~~tA~~~~~~-----------g~~~~~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 356 KNTVRGILHITADDLGPT-----------GWDADYGYGVVRAALAVQA 392 (395)
T ss_dssp SSSHHHHHHHHSBCCSSS-----------SSBTTTBTCBCCHHHHHHH
T ss_pred HHHHHHHHHhhccccCCC-----------CCCCCccCceeCHHHHHHH
Confidence 999999999999987432 2467899999999999873
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=5.8e-55 Score=489.95 Aligned_cols=335 Identities=20% Similarity=0.266 Sum_probs=261.9
Q ss_pred cccceeEEecceeeeEEEEcCHHHHHHhhC-CCCeEEEEeccccccCCCCC-------------ccccCCCcCCCCCCcc
Q 044993 4 ARELISSSYRRHINGFAADLEEEHAQQLAN-HPEVVSVFLNKPTKKLTTGA-------------WNFLGLEKDNVIPSNS 69 (713)
Q Consensus 4 ~~~~i~~~y~~~~ng~s~~~~~~~~~~L~~-~~~V~~V~~~~~~~~~~~~s-------------~~~~g~~~~~~~~~~~ 69 (713)
.+.+++++|. .|++|+++++.+++++|++ +|.|++|++++.+++..... |.+..+.. ...
T Consensus 64 ~g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~w~l~~i~~-----~~~ 137 (471)
T 3t41_A 64 KSLNVVYNIP-ELHVAQIKMTKMHANALANYKNDIKYINATCSTCITSEKTIDRTSNESLFSRQWDMNKITN-----NGA 137 (471)
T ss_dssp HTCEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEEEEEECCSSCBCCCCCCCC---CCSCCCCHHHHTTTT-----TTG
T ss_pred CCCEEEEecC-CccEEEEEeCHHHHHHHHhcCCCCcEEEecceeccccccccccCCCCccccccccHhhccC-----cHH
Confidence 4567888886 5999999999999999999 99999999999887754332 22222221 137
Q ss_pred ccccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecccchhhhhcCCCCCCCC
Q 044993 70 TWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRNPAFDI 149 (713)
Q Consensus 70 ~~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~ 149 (713)
+|..+.+|+||+|||||||||++||+|.+.- |.+. ..++....|..... ..
T Consensus 138 ~~~~~~~G~gv~VaViDtGid~~Hp~~~~~~-------~~~~------------~~~~~~~~~~~~~~----------~~ 188 (471)
T 3t41_A 138 SYDDLPKHANTKIAIIDTGVMKNHDDLKNNF-------STDS------------KNLVPLNGFRGTEP----------EE 188 (471)
T ss_dssp GGGGCCSSCCCCEEEEESCCCTTCTTTTTTB-------CTTC------------EECCCTTCGGGCCT----------TC
T ss_pred HHhccCCCCCcEEEEEeCCCCCCChhHhcCc-------ccCC------------cccccCCCccCCCc----------cc
Confidence 8999999999999999999999999997531 1110 01111111111100 01
Q ss_pred CCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCCCHHHHHHHHH
Q 044993 150 PPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIEAFD 229 (713)
Q Consensus 150 ~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~~~~i~~ai~ 229 (713)
..+...+.|..||||||||||+|+. .+.||||+|+|+.+|+++.. .+..+++++||+
T Consensus 189 ~~~~~~~~d~~gHGT~vAgiiaa~g-------------~~~GvAp~a~l~~~kv~~~~----------~~~~~~i~~ai~ 245 (471)
T 3t41_A 189 TGDVHDVNDRKGHGTMVSGQTSANG-------------KLIGVAPNNKFTMYRVFGSK----------KTELLWVSKAIV 245 (471)
T ss_dssp CCCTTCCCCSSSHHHHHHHHHHCBS-------------SSBCSSTTSCEEEEECCSSS----------CCCHHHHHHHHH
T ss_pred CCCCCCCcCCCCccchhhheeecCC-------------ceeEECCCCeEEEEEeccCC----------CCcHHHHHHHHH
Confidence 1123356788999999999999862 26789999999999999864 688999999999
Q ss_pred HHHHcCCCeeEeecCCCCCCC------------CCcchHHHHHHHHhcCCcEEEEecCCCCCCCCC--------------
Q 044993 230 DAIHDGVDIITVSLGYDNIAD------------FLSDGVVIGAFHATMNGVLTVAASGNGGPEPQT-------------- 283 (713)
Q Consensus 230 ~a~~~gvdVIn~SlG~~~~~~------------~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~-------------- 283 (713)
+|+++|++|||||||...... ...+.+..++..+.++|++||+||||+|.....
T Consensus 246 ~a~~~g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~~ 325 (471)
T 3t41_A 246 QAANDGNQVINISVGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNG 325 (471)
T ss_dssp HHHHTTCSEEEECCCEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSSS
T ss_pred HHHhCCCCEEEeCCCCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcCCCcccccccccccccCC
Confidence 999999999999999841111 123467888889999999999999999975432
Q ss_pred ----ccCCCCccEEeccccCCceeEEEEEeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccc
Q 044993 284 ----INNMAPWMLTVGASTMDREFAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKV 359 (713)
Q Consensus 284 ----~~~~ap~vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~ 359 (713)
.+...+++|+|||++.
T Consensus 326 ~~~~~Pa~~~~vitVgA~~~------------------------------------------------------------ 345 (471)
T 3t41_A 326 EVKDVPASMDNVVTVGSTDQ------------------------------------------------------------ 345 (471)
T ss_dssp EEEEETTTSTTEEEEEEECT------------------------------------------------------------
T ss_pred ceeeccccCCCeEEEEeeCC------------------------------------------------------------
Confidence 3445689999998542
Q ss_pred cCeEEEEEechhhHHHhhcCceEEEEccCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCc
Q 044993 360 QGRILVCLHEEKGYEAAKKGAVAMITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPA 439 (713)
Q Consensus 360 ~gkivl~~~~~k~~~~~~~Ga~g~i~~~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 439 (713)
.+.
T Consensus 346 -----------------------------------------------------------------------------~~~ 348 (471)
T 3t41_A 346 -----------------------------------------------------------------------------KSN 348 (471)
T ss_dssp -----------------------------------------------------------------------------TSS
T ss_pred -----------------------------------------------------------------------------CCC
Confidence 256
Q ss_pred cccccCCCCCCCCCCCCCCceeeCCCc----------------------EEeeecCCCCCCCCcCCCCccceeeeccccc
Q 044993 440 VASFSSRGPNRIDPSIIKPDVIAPGVN----------------------IVAAYTSERGPTGYARDNRRFAFTAMDGTSM 497 (713)
Q Consensus 440 ~a~fSS~GPt~~~~~~~KPDI~APG~~----------------------I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSm 497 (713)
++.||++||+. |||+|||++ |+++++.. .|..++||||
T Consensus 349 ~a~fS~~G~~~-------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~~~~-------------~~~~~sGTS~ 408 (471)
T 3t41_A 349 LSEFSNFGMNY-------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTANNG-------------RYIYQAGTAL 408 (471)
T ss_dssp BCTTCCBCTTT-------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEECTTS-------------SEEEECSHHH
T ss_pred CCCccCCCCCC-------CeEEecCCCcccccccccccccccccccCceeEecCCCC-------------CEEeecchHH
Confidence 88999999963 599999987 88888763 7999999999
Q ss_pred hhhHHHHHHHHHHHhCC-CCCHHHHHHHHHhcccccCCCCCccccCCCCCCCCCccCccccCccCcCCC
Q 044993 498 STPIVAGIAGLIKTVHP-DWSPAAIKSAIMTTARATDANNKPISEFNGKEATAFAYGSGHVDPNSALDP 565 (713)
Q Consensus 498 AaP~VAG~aALl~q~~p-~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~id~~~A~~~ 565 (713)
|||||||++|||+|++| .|+|.+||++|++||.+... .++..||||+||+.+|++.
T Consensus 409 AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~~------------~~~~~~G~G~vd~~~Al~~ 465 (471)
T 3t41_A 409 ATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKNN------------KPFSRYGHGELDVYKALNV 465 (471)
T ss_dssp HHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCSC------------CCHHHHTTCBBCHHHHTTT
T ss_pred HHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCC------------CCcCccccChhCHHHHHHH
Confidence 99999999999999999 89999999999999987632 3677999999999999984
No 7
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=4e-54 Score=478.00 Aligned_cols=372 Identities=20% Similarity=0.225 Sum_probs=265.1
Q ss_pred CccccccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecccchhhhhcCCCCC
Q 044993 67 SNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRNPA 146 (713)
Q Consensus 67 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~~~~~~~~~~~~~ 146 (713)
++.+|..+ |+||+|+|||||||++||+|.+. ++..+++...
T Consensus 13 ~~~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~--------------------------~~~~~~~~~~----------- 53 (441)
T 1y9z_A 13 ATVLSDSQ--AGNRTICIIDSGYDRSHNDLNAN--------------------------NVTGTNNSGT----------- 53 (441)
T ss_dssp CSSSCCTT--GGGCEEEEEESCCCTTSTTTTTS--------------------------EEEECCCTTS-----------
T ss_pred hhhhhhcC--CCCcEEEEEcCCCCCCChhHhcC--------------------------cccCcccCCC-----------
Confidence 34789865 77999999999999999999642 1222222110
Q ss_pred CCCCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCC--cEEEeeeecCCCCccCCCCCCCCCHHHH
Q 044993 147 FDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRA--RVASYKVCWYSEDDHNAAHGNDCMEQDT 224 (713)
Q Consensus 147 ~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A--~l~~~kv~~~~~~~~~~~~gg~~~~~~i 224 (713)
.+...+.|..||||||||||+|.. +..| +.||||+| +|+.+|+++.. +.+..+++
T Consensus 54 ----~~~~~~~d~~gHGT~vAgiia~~~----~~~g------~~GvAP~a~~~l~~~kv~~~~---------g~~~~~~~ 110 (441)
T 1y9z_A 54 ----GNWYQPGNNNAHGTHVAGTIAAIA----NNEG------VVGVMPNQNANIHIVKVFNEA---------GWGYSSSL 110 (441)
T ss_dssp ----CCTTCCCSSCCHHHHHHHHHHCCC----SSSB------CCCSSCSSCSEEEEEECEETT---------EECCSSCH
T ss_pred ----CCCCCCCCCCCcHHHHHHHHhccc----CCCC------ceEecCCCCCEEEEEEEeCCC---------CCcCHHHH
Confidence 112345678999999999999973 2234 88999995 89999999876 24778899
Q ss_pred HHHHHHHHHc-CCCeeEeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCCCCccCCCCccEEeccccCCcee
Q 044993 225 IEAFDDAIHD-GVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTINNMAPWMLTVGASTMDREF 303 (713)
Q Consensus 225 ~~ai~~a~~~-gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVgA~~~~~~~ 303 (713)
++||++|+++ |+||||||||.. .....+..++.++.++|++||+||||+|+.........+++|+|||++.+...
T Consensus 111 ~~ai~~a~~~~g~~Vin~S~G~~----~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~ 186 (441)
T 1y9z_A 111 VAAIDTCVNSGGANVVTMSLGGS----GSTTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDH 186 (441)
T ss_dssp HHHHHHHHHTTCCSEEEECCCBS----CCBHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCB
T ss_pred HHHHHHHHHhcCCcEEEeCCCCC----CCCHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCC
Confidence 9999999999 999999999987 22346788899999999999999999998766666778999999999887543
Q ss_pred EEEEEeC-------------------Cce----EEeecccc-cC-CCC-Ccee--eEeccccccccCcCCCCCCCCC--C
Q 044993 304 AGYITLG-------------------NNK----RLRGASLS-VD-MPR-KSYP--LISGEDARMANATDKDASCKPG--T 353 (713)
Q Consensus 304 ~~~~~~g-------------------~g~----~~~g~~~~-~~-~~~-~~~~--lv~~~~~~~~~~~~~~~~c~~~--~ 353 (713)
..+...+ ++. ++.|.+++ .. ++. ..++ +.+...............|... .
T Consensus 187 ~~~S~~g~~vdv~ApG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~C~~~~~~ 266 (441)
T 1y9z_A 187 AAFSQYTDQVEISGPGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINASATGALAECTVNGTS 266 (441)
T ss_dssp CTTSCCCTTEEEEEECSSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCCCEEEEEEEEEEEETTE
T ss_pred CccccCCCceEEEeccCCeeccccCCCcccceeecccccccccccCcccccccCCccccccccccccccchhcccccccc
Confidence 2221111 111 12222222 00 000 0000 1111000000000112346643 4
Q ss_pred CCcccccCeEEEEEec----------hhhHHHhhcCceEEEEccC----Cc---c---cccCCcccEEEeehhhHHHHHH
Q 044993 354 LDRKKVQGRILVCLHE----------EKGYEAAKKGAVAMITGAS----GT---F---SASYGFLPVTKLKIKDFEAVLD 413 (713)
Q Consensus 354 ~~~~~~~gkivl~~~~----------~k~~~~~~~Ga~g~i~~~~----g~---~---~~~~~~~p~~~i~~~~g~~l~~ 413 (713)
++..+++|||++|+|. +|..+++++||.++|+..+ |. + ......+|.+.++.++|+.|++
T Consensus 267 ~~~~~~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~ 346 (441)
T 1y9z_A 267 FSCGNMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKA 346 (441)
T ss_dssp EECCCCTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHT
T ss_pred ccCCCccccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHH
Confidence 5778999999999982 6889999999999999322 21 1 1234679999999999999988
Q ss_pred HHhcCCCcEEEEeecceeccccCCCccccccCCCCCCCCCCCCCCceeeCCCcEEeeecCCCCCCCCcCCCCccceeeec
Q 044993 414 YIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVIAPGVNIVAAYTSERGPTGYARDNRRFAFTAMD 493 (713)
Q Consensus 414 ~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~s 493 (713)
|+.+. ++ + ++... ..|..+|
T Consensus 347 ~~~~~----~t-----------------------------------~--------~~~~~-------------~~y~~~s 366 (441)
T 1y9z_A 347 KLGQS----TT-----------------------------------V--------SNQGN-------------QDYEYYN 366 (441)
T ss_dssp TTTSE----EE-----------------------------------E--------EEEEE-------------ESEEEEC
T ss_pred HhcCC----cc-----------------------------------c--------ccccC-------------CCceeec
Confidence 76321 00 0 11111 2899999
Q ss_pred cccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCccccCCCCCCCCCccCccccCccCcCCCCeeecCCc
Q 044993 494 GTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTARATDANNKPISEFNGKEATAFAYGSGHVDPNSALDPGLVYDLTL 573 (713)
Q Consensus 494 GTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~id~~~A~~~~lv~~~~~ 573 (713)
|||||||||||++|||+|+||+|+|++||++||+||++++..+ .+.+||+|+||+.+|+
T Consensus 367 GTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g-----------~~~~~G~G~vn~~~A~---------- 425 (441)
T 1y9z_A 367 GTSMATPHVSGVATLVWSYHPECSASQVRAALNATADDLSVAG-----------RDNQTGYGMINAVAAK---------- 425 (441)
T ss_dssp SHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSSS-----------CBTTTBTCBCCHHHHH----------
T ss_pred ccccCCcccchHHHHHHHHCCCCCHHHHHHHHHhhchhhccCC-----------CcccccccccCHHHHH----------
Confidence 9999999999999999999999999999999999999876433 3568999999999995
Q ss_pred cccccccccCCCc
Q 044993 574 DDYLGYLCNRGYK 586 (713)
Q Consensus 574 ~d~~~~~~~~~~~ 586 (713)
||+.|||.+++.
T Consensus 426 -~~~~~lc~~~~~ 437 (441)
T 1y9z_A 426 -AYLDESCTGPTD 437 (441)
T ss_dssp -HHHHHCTTCC--
T ss_pred -HHHHhhhcCCCC
Confidence 589999998864
No 8
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=9.3e-53 Score=480.68 Aligned_cols=362 Identities=19% Similarity=0.169 Sum_probs=260.5
Q ss_pred ccceeEEecceeeeEEEEcCH---H-HHHHhh--CCCCeEEEEeccccccCCC----CCccc-------c-------CC-
Q 044993 5 RELISSSYRRHINGFAADLEE---E-HAQQLA--NHPEVVSVFLNKPTKKLTT----GAWNF-------L-------GL- 59 (713)
Q Consensus 5 ~~~i~~~y~~~~ng~s~~~~~---~-~~~~L~--~~~~V~~V~~~~~~~~~~~----~s~~~-------~-------g~- 59 (713)
..++.+++. .+++++++++. + .+++|+ ++|+|++|+|++.+++... ....+ . +-
T Consensus 52 g~~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~~~~~V~~vepd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (671)
T 1r6v_A 52 NGKVVLELP-QIKVVSIKLNGMTVKQAYDKIKALALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEE 130 (671)
T ss_dssp TCEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSCCSSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSST
T ss_pred CCeEEEEcC-CCcEEEEEeCCcCHHHHHHHHHhccCCCceEEecCeEEEeccccccCccccccccccccccccccccccc
Confidence 456777776 68999999865 3 356676 4899999999987654310 00000 0 00
Q ss_pred -C----cCCCCCCccc-cccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecc
Q 044993 60 -E----KDNVIPSNST-WEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYN 133 (713)
Q Consensus 60 -~----~~~~~~~~~~-~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~ 133 (713)
. ....+.++.+ |+. .+|+||+|||||||||++||+|.+. ++..+.+.
T Consensus 131 ~~~~~W~l~~I~~~~a~w~~-~tG~gV~VAVIDTGVd~~HpdL~~~--------------------------~~~g~~~~ 183 (671)
T 1r6v_A 131 LSNELWGLEAIGVTQQLWEE-ASGTNIIVAVVDTGVDGTHPDLEGQ--------------------------VIAGYRPA 183 (671)
T ss_dssp TGGGCHHHHHTTCCHHHHHH-CSCTTCEEEEEESCCBTTSGGGTTT--------------------------BCCEEEGG
T ss_pred ccccCCchhccCCchhhhhc-cCCCCCEEEEEeCCCCCCCcccccc--------------------------EEeccccc
Confidence 0 0001234566 888 8999999999999999999999642 12122211
Q ss_pred cchhhhhcCCCCCCCCCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCC
Q 044993 134 KGLISAATKRNPAFDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNA 213 (713)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~ 213 (713)
.+.. . +...+..|..||||||||||+|.. +..| +.||||+|+|+.+|++..... .
T Consensus 184 ~~~~-~-----------p~~~d~~d~~gHGThVAGiIAa~~----ng~g------v~GVAP~A~I~~vkv~~~~~~---~ 238 (671)
T 1r6v_A 184 FDEE-L-----------PAGTDSSYGGSAGTHVAGTIAAKK----DGKG------IVGVAPGAKIMPIVIFDDPAL---V 238 (671)
T ss_dssp GTEE-E-----------CTTCBCCTTCSHHHHHHHHHHCCC----SSSS------CCCSCTTSEEEEEESBCCHHH---H
T ss_pred CCCc-C-----------CCCCCCccCCCcchhhhhhhhccC----CCCc------eEEECCCCEEEEEEeccCccc---c
Confidence 1100 0 001233467899999999999972 3344 789999999999999976100 0
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCCeeEeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCC-CCccCCCCccE
Q 044993 214 AHGNDCMEQDTIEAFDDAIHDGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEP-QTINNMAPWML 292 (713)
Q Consensus 214 ~~gg~~~~~~i~~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~-~~~~~~ap~vi 292 (713)
..++....+.+++||+||+++|++|||||||.. .....+..++..|.++|++||+||||+|... ...+...|++|
T Consensus 239 ~g~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~----~~s~~l~~Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~VI 314 (671)
T 1r6v_A 239 GGNGYVGDDYVAAGIIWATDHGAKVMNHSWGGW----GYSYTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVI 314 (671)
T ss_dssp CTTSBCCHHHHHHHHHHHHHTTCSEEEECEEBS----CCCHHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCE
T ss_pred CCCCccCHHHHHHHHHHHHHcCCCEEEeCCCCC----CCCHHHHHHHHHHHhCCCEEEEeCCCCCCCCCccCcccCCCeE
Confidence 001134567799999999999999999999987 2346788899999999999999999999653 34445678999
Q ss_pred EeccccCCceeEEEEEeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccccCeEEEEEechhh
Q 044993 293 TVGASTMDREFAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKG 372 (713)
Q Consensus 293 tVgA~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~k~ 372 (713)
+|||++.+..
T Consensus 315 tVgA~d~~g~---------------------------------------------------------------------- 324 (671)
T 1r6v_A 315 QVAALDYYGG---------------------------------------------------------------------- 324 (671)
T ss_dssp EEEEEEEETT----------------------------------------------------------------------
T ss_pred EEEEEcCCCC----------------------------------------------------------------------
Confidence 9998642210
Q ss_pred HHHhhcCceEEEEccCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCccccccCCCCCCCC
Q 044993 373 YEAAKKGAVAMITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRID 452 (713)
Q Consensus 373 ~~~~~~Ga~g~i~~~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~ 452 (713)
...++.||++||..
T Consensus 325 ----------------------------------------------------------------~~~~a~fSn~G~~v-- 338 (671)
T 1r6v_A 325 ----------------------------------------------------------------TFRVAGFSSRSDGV-- 338 (671)
T ss_dssp ----------------------------------------------------------------EEEECSSSCCCTTE--
T ss_pred ----------------------------------------------------------------ceeeccccCCCCCe--
Confidence 02378999999976
Q ss_pred CCCCCCceeeCCCcEEeeecCCCCCCC-----CcCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHh
Q 044993 453 PSIIKPDVIAPGVNIVAAYTSERGPTG-----YARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMT 527 (713)
Q Consensus 453 ~~~~KPDI~APG~~I~sa~~~~~~~~~-----~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~ 527 (713)
||+|||++|+++++....... .......+.|..++|||||||||||++|||+|++|+|+|.+||++|++
T Consensus 339 ------dv~APG~~I~St~p~~~~~g~~~~~~~~~~~~~~~y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~ 412 (671)
T 1r6v_A 339 ------SVGAPGVTILSTVPGEDSIGYEGHNENVPATNGGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLEN 412 (671)
T ss_dssp ------EEEEECSSEEEECCCTTSTTCCCCCTTCCCSSSCCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHH
T ss_pred ------eEEecCCCEEeecCCCCccccccccccccccCCCceEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Confidence 999999999999876421110 001112347999999999999999999999999999999999999999
Q ss_pred cccccCCCCCccccCCCCCCCCCccCccccCccCcCCCCeeecCCcccc
Q 044993 528 TARATDANNKPISEFNGKEATAFAYGSGHVDPNSALDPGLVYDLTLDDY 576 (713)
Q Consensus 528 TA~~~~~~g~~~~~~~~~~~~~~~~G~G~id~~~A~~~~lv~~~~~~d~ 576 (713)
||+++...+ .+..||||+||+.+|++..|..+....+|
T Consensus 413 TA~~~~~~g-----------~d~~~G~G~vna~~Al~~~l~~~~~~~~~ 450 (671)
T 1r6v_A 413 TAFDFNGNG-----------WDHDTGYGLVKLDAALQGPLPTQGGVEEF 450 (671)
T ss_dssp HCBCSSSSS-----------CBTTTBTCBCCHHHHHHCCCCSSSEEEEE
T ss_pred hCcCCCCCC-----------CCCCcccceeCHHHHhhhhcCCCCCccce
Confidence 999875322 45689999999999999877666544444
No 9
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=2.2e-52 Score=434.97 Aligned_cols=258 Identities=28% Similarity=0.400 Sum_probs=217.3
Q ss_pred CccccccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecccchhhhhcCCCCC
Q 044993 67 SNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRNPA 146 (713)
Q Consensus 67 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~~~~~~~~~~~~~ 146 (713)
++.+|..+++|+||+|+|||||||++||+|+ +...++|..+
T Consensus 13 ~~~~~~~g~~G~gv~VaViDtGid~~h~~l~----------------------------~~~g~~~~~~----------- 53 (274)
T 1r0r_E 13 ADKVQAQGFKGANVKVAVLDTGIQASHPDLN----------------------------VVGGASFVAG----------- 53 (274)
T ss_dssp HHHHHHHTCSCTTCEEEEEESCCCTTCTTCC----------------------------EEEEEECSTT-----------
T ss_pred CHHHHhcCCCCCCCEEEEEcCCCCCCCHhHc----------------------------CCCCccccCC-----------
Confidence 4689999999999999999999999999993 3334445432
Q ss_pred CCCCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCCCHHHHHH
Q 044993 147 FDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIE 226 (713)
Q Consensus 147 ~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~~~~i~~ 226 (713)
...+.|..||||||||||+|.. +..| +.||||+|+|+.+|++... +.+..+++++
T Consensus 54 ------~~~~~d~~gHGT~vAgiia~~~----~~~g------~~GvAp~a~l~~~~v~~~~---------g~~~~~~i~~ 108 (274)
T 1r0r_E 54 ------EAYNTDGNGHGTHVAGTVAALD----NTTG------VLGVAPSVSLYAVKVLNSS---------GSGSYSGIVS 108 (274)
T ss_dssp ------CCTTCCSSSHHHHHHHHHHCCS----SSSB------CCCSSTTSEEEEEECSCTT---------SEECHHHHHH
T ss_pred ------CCCCCCCCCCHHHHHHHHHccC----CCCc------eEEECCCCEEEEEEEECCC---------CCccHHHHHH
Confidence 1124577899999999999962 2334 7899999999999999765 2577889999
Q ss_pred HHHHHHHcCCCeeEeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCC----CCccCCCCccEEeccccCCce
Q 044993 227 AFDDAIHDGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEP----QTINNMAPWMLTVGASTMDRE 302 (713)
Q Consensus 227 ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~----~~~~~~ap~vitVgA~~~~~~ 302 (713)
+|++|++.+++|||||||.. .....+..++.++.++|++||+||||+|... ...+...+++|+|||++.
T Consensus 109 ai~~a~~~~~~Vin~S~G~~----~~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~--- 181 (274)
T 1r0r_E 109 GIEWATTNGMDVINMSLGGA----SGSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDS--- 181 (274)
T ss_dssp HHHHHHHTTCSEEEECEEBS----SCCHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECT---
T ss_pred HHHHHHHcCCCEEEeCCCCC----CCcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecC---
Confidence 99999999999999999998 2346788899999999999999999999652 223445689999998532
Q ss_pred eEEEEEeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccccCeEEEEEechhhHHHhhcCceE
Q 044993 303 FAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKGYEAAKKGAVA 382 (713)
Q Consensus 303 ~~~~~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~k~~~~~~~Ga~g 382 (713)
T Consensus 182 -------------------------------------------------------------------------------- 181 (274)
T 1r0r_E 182 -------------------------------------------------------------------------------- 181 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEccCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCccccccCCCCCCCCCCCCCCceee
Q 044993 383 MITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVIA 462 (713)
Q Consensus 383 ~i~~~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~KPDI~A 462 (713)
.+.++.||++||.. ||+|
T Consensus 182 ------------------------------------------------------~~~~~~~S~~G~~~--------di~A 199 (274)
T 1r0r_E 182 ------------------------------------------------------NSNRASFSSVGAEL--------EVMA 199 (274)
T ss_dssp ------------------------------------------------------TSCBCTTCCCSTTE--------EEEE
T ss_pred ------------------------------------------------------CCCcCccCCCCCCc--------eEEe
Confidence 24578899999854 9999
Q ss_pred CCCcEEeeecCCCCCCCCcCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCccccC
Q 044993 463 PGVNIVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTARATDANNKPISEF 542 (713)
Q Consensus 463 PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~g~~~~~~ 542 (713)
||.+|+++++.+ .|..++|||||||||||++|||+|++|+|++.+||++|++||+++.
T Consensus 200 PG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g--------- 257 (274)
T 1r0r_E 200 PGAGVYSTYPTN-------------TYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG--------- 257 (274)
T ss_dssp ECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS---------
T ss_pred CCCCeEeecCCC-------------CEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC---------
Confidence 999999998763 8999999999999999999999999999999999999999998762
Q ss_pred CCCCCCCCccCccccCccCcCC
Q 044993 543 NGKEATAFAYGSGHVDPNSALD 564 (713)
Q Consensus 543 ~~~~~~~~~~G~G~id~~~A~~ 564 (713)
++..||||+||+.+|++
T Consensus 258 -----~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 258 -----SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp -----CHHHHTTCBCCHHHHTC
T ss_pred -----CCCCcccCccCHHHHhC
Confidence 46789999999999985
No 10
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=3.4e-52 Score=431.87 Aligned_cols=257 Identities=30% Similarity=0.432 Sum_probs=219.0
Q ss_pred CccccccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecccchhhhhcCCCCC
Q 044993 67 SNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRNPA 146 (713)
Q Consensus 67 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~~~~~~~~~~~~~ 146 (713)
++.+|..+++|+||+|+|||||| .+||+|+ +...++|..+
T Consensus 13 ~~~a~~~g~~G~gv~VaViDtGi-~~h~~l~----------------------------~~~~~~~~~~----------- 52 (269)
T 1gci_A 13 APAAHNRGLTGSGVKVAVLDTGI-STHPDLN----------------------------IRGGASFVPG----------- 52 (269)
T ss_dssp HHHHHHTTCSCTTCEEEEEESCC-CCCTTCC----------------------------EEEEEECSTT-----------
T ss_pred cHHHHhcCCCCCCCEEEEECCCC-CCCHhhc----------------------------ccCCcccCCC-----------
Confidence 46899999999999999999999 8999993 3334445432
Q ss_pred CCCCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCCCHHHHHH
Q 044993 147 FDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIE 226 (713)
Q Consensus 147 ~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~~~~i~~ 226 (713)
...+.|..||||||||||+|.. +..| +.||||+|+|+.+|++... +.+..+++++
T Consensus 53 ------~~~~~d~~gHGT~vAgiia~~~----~~~~------~~GvAp~a~l~~~~v~~~~---------g~~~~~~~~~ 107 (269)
T 1gci_A 53 ------EPSTQDGNGHGTHVAGTIAALN----NSIG------VLGVAPSAELYAVKVLGAS---------GSGSVSSIAQ 107 (269)
T ss_dssp ------CCSCSCSSSHHHHHHHHHHCCC----SSSB------CCCSSTTCEEEEEECBCTT---------SCBCHHHHHH
T ss_pred ------CCCCCCCCCChHHHHHHHhcCc----CCCC------cEEeCCCCEEEEEEeECCC---------CCcCHHHHHH
Confidence 1234678999999999999962 3334 7889999999999999765 2577889999
Q ss_pred HHHHHHHcCCCeeEeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCCCCccCCCCccEEeccccCCceeEEE
Q 044993 227 AFDDAIHDGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTINNMAPWMLTVGASTMDREFAGY 306 (713)
Q Consensus 227 ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVgA~~~~~~~~~~ 306 (713)
||++|++.+++|||||||.. .....+..++.++.++|++||+||||+|......+...+++|+|||++.
T Consensus 108 ai~~a~~~~~~Vin~S~G~~----~~~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~------- 176 (269)
T 1gci_A 108 GLEWAGNNGMHVANLSLGSP----SPSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQ------- 176 (269)
T ss_dssp HHHHHHHTTCSEEEECCCBS----SCCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT-------
T ss_pred HHHHHHHCCCeEEEeCCCCC----CCCHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecC-------
Confidence 99999999999999999987 2345788899999999999999999999766566667789999998532
Q ss_pred EEeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccccCeEEEEEechhhHHHhhcCceEEEEc
Q 044993 307 ITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKGYEAAKKGAVAMITG 386 (713)
Q Consensus 307 ~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~k~~~~~~~Ga~g~i~~ 386 (713)
T Consensus 177 -------------------------------------------------------------------------------- 176 (269)
T 1gci_A 177 -------------------------------------------------------------------------------- 176 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCccccccCCCCCCCCCCCCCCceeeCCCc
Q 044993 387 ASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVIAPGVN 466 (713)
Q Consensus 387 ~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~KPDI~APG~~ 466 (713)
.+.++.||++||.. ||+|||++
T Consensus 177 --------------------------------------------------~~~~~~~S~~G~~~--------di~APG~~ 198 (269)
T 1gci_A 177 --------------------------------------------------NNNRASFSQYGAGL--------DIVAPGVN 198 (269)
T ss_dssp --------------------------------------------------TSCBCTTCCCSTTE--------EEEEECSS
T ss_pred --------------------------------------------------CCCCCCCCCCCCCc--------ceEecCCC
Confidence 24578899999965 99999999
Q ss_pred EEeeecCCCCCCCCcCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCccccCCCCC
Q 044993 467 IVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTARATDANNKPISEFNGKE 546 (713)
Q Consensus 467 I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~ 546 (713)
|+++++.. .|..++|||||||||||++|||+|++|+|++.|||++|++||+++.
T Consensus 199 i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g------------- 252 (269)
T 1gci_A 199 VQSTYPGS-------------TYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG------------- 252 (269)
T ss_dssp EEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS-------------
T ss_pred eEeecCCC-------------CEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC-------------
Confidence 99998763 8999999999999999999999999999999999999999998763
Q ss_pred CCCCccCccccCccCcCC
Q 044993 547 ATAFAYGSGHVDPNSALD 564 (713)
Q Consensus 547 ~~~~~~G~G~id~~~A~~ 564 (713)
+++.||||+||+.+|++
T Consensus 253 -~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 253 -STNLYGSGLVNAEAATR 269 (269)
T ss_dssp -CHHHHTTCBCCHHHHTC
T ss_pred -CCCCcccCccCHHHHcC
Confidence 46689999999999985
No 11
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=6.8e-52 Score=432.57 Aligned_cols=260 Identities=30% Similarity=0.406 Sum_probs=218.0
Q ss_pred CccccccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecccchhhhhcCCCCC
Q 044993 67 SNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRNPA 146 (713)
Q Consensus 67 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~~~~~~~~~~~~~ 146 (713)
++.+|..+++|+||+|||||||||++||+|+ +...++|..+
T Consensus 13 ~~~~~~~g~~G~gv~VaViDtGid~~h~~l~----------------------------~~~g~~~~~~----------- 53 (281)
T 1to2_E 13 APALHSQGYTGSNVKVAVIDSGIDSSHPDLK----------------------------VAGGASMVPS----------- 53 (281)
T ss_dssp HHHHHHHTCSCTTCEEEEEESCCCTTCTTCC----------------------------EEEEEECCTT-----------
T ss_pred hHHHHhcCCCCCCCEEEEEcCCCCCCCHHHc----------------------------CcCCccccCC-----------
Confidence 4589999999999999999999999999993 2333444322
Q ss_pred CCCCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCCCHHHHHH
Q 044993 147 FDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIE 226 (713)
Q Consensus 147 ~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~~~~i~~ 226 (713)
+.....|..||||||||||+|. .+..| +.||||+|+|+.+|++... +.+..+++++
T Consensus 54 -----~~~~~~d~~gHGT~vAgiia~~----~~~~g------~~GvAp~a~l~~~kv~~~~---------g~~~~~~i~~ 109 (281)
T 1to2_E 54 -----ETNPFQDNNSHGTHVAGTVAAL----NNSIG------VLGVAPSASLYAVKVLGAD---------GSGQYSWIIN 109 (281)
T ss_dssp -----CCCTTCCSSSHHHHHHHHHHCC----SSSSS------BCCSSTTSEEEEEECSCTT---------SEECHHHHHH
T ss_pred -----CCCCCCCCCCcHHHHHHHHhcc----CCCCc------ceeeCCCCEEEEEEEeCCC---------CCccHHHHHH
Confidence 0112357889999999999996 23334 7899999999999999765 2567889999
Q ss_pred HHHHHHHcCCCeeEeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCC----CCccCCCCccEEeccccCCce
Q 044993 227 AFDDAIHDGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEP----QTINNMAPWMLTVGASTMDRE 302 (713)
Q Consensus 227 ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~----~~~~~~ap~vitVgA~~~~~~ 302 (713)
+|+++++.+++|||||||.. .....+..++.++.++|++||+||||+|... ...+...|++|+|||++.
T Consensus 110 ai~~a~~~~~~Vin~S~G~~----~~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~--- 182 (281)
T 1to2_E 110 GIEWAIANNMDVINMSLGGP----SGSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDS--- 182 (281)
T ss_dssp HHHHHHHTTCSEEEECEEBS----CCCHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECT---
T ss_pred HHHHHHHCCCcEEEECCcCC----CCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecC---
Confidence 99999999999999999987 2346788899999999999999999999652 223445689999997532
Q ss_pred eEEEEEeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccccCeEEEEEechhhHHHhhcCceE
Q 044993 303 FAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKGYEAAKKGAVA 382 (713)
Q Consensus 303 ~~~~~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~k~~~~~~~Ga~g 382 (713)
T Consensus 183 -------------------------------------------------------------------------------- 182 (281)
T 1to2_E 183 -------------------------------------------------------------------------------- 182 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEccCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCccccccCCCCCCCCCCCCCCceee
Q 044993 383 MITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVIA 462 (713)
Q Consensus 383 ~i~~~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~KPDI~A 462 (713)
.+.++.||++||.. ||+|
T Consensus 183 ------------------------------------------------------~~~~~~fS~~G~~~--------di~A 200 (281)
T 1to2_E 183 ------------------------------------------------------SNQRASFSSVGPEL--------DVMA 200 (281)
T ss_dssp ------------------------------------------------------TSCBCTTCCCSTTC--------CEEE
T ss_pred ------------------------------------------------------CCCcCCcCCCCCCc--------eEEe
Confidence 24578899999855 9999
Q ss_pred CCCcEEeeecCCCCCCCCcCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCccccC
Q 044993 463 PGVNIVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTARATDANNKPISEF 542 (713)
Q Consensus 463 PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~g~~~~~~ 542 (713)
||.+|+++++.+ .|..++|||||||||||++|||+|++|+|++.+||++|++||+++.
T Consensus 201 PG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g--------- 258 (281)
T 1to2_E 201 PGVSIQSTLPGN-------------KYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG--------- 258 (281)
T ss_dssp ECSSEEEEETTT-------------EEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS---------
T ss_pred cCCCeEeecCCC-------------CEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC---------
Confidence 999999998763 7999999999999999999999999999999999999999998862
Q ss_pred CCCCCCCCccCccccCccCcCCC
Q 044993 543 NGKEATAFAYGSGHVDPNSALDP 565 (713)
Q Consensus 543 ~~~~~~~~~~G~G~id~~~A~~~ 565 (713)
+++.||||+||+.+|+++
T Consensus 259 -----~~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 259 -----DSFYYGKGLINVQAAAQH 276 (281)
T ss_dssp -----CHHHHTTCBCCHHHHTSS
T ss_pred -----CCCCcccceecHHHHhhh
Confidence 467899999999999985
No 12
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=1.5e-51 Score=429.86 Aligned_cols=260 Identities=28% Similarity=0.357 Sum_probs=214.0
Q ss_pred CccccccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecccchhhhhcCCCCC
Q 044993 67 SNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRNPA 146 (713)
Q Consensus 67 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~~~~~~~~~~~~~ 146 (713)
++.+|+.+..|+||+|+|||||||++||+|.+ +++..++|.++
T Consensus 20 ~~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~--------------------------~~~~~~~~~~~----------- 62 (280)
T 1dbi_A 20 TDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDG--------------------------KVIKGYDFVDN----------- 62 (280)
T ss_dssp HHHHTTTCCCCTTCEEEEEESCCCTTSTTTTT--------------------------TEEEEEETTTT-----------
T ss_pred cHHHHhhcCCCCCCEEEEEeCCcCCCChhhcc--------------------------CcccceeccCC-----------
Confidence 56899999888899999999999999999964 35555666432
Q ss_pred CCCCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCCCHHHHHH
Q 044993 147 FDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIE 226 (713)
Q Consensus 147 ~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~~~~i~~ 226 (713)
..++.|..+|||||||||+|... +..| +.||||+|+|+.+|++... +.+..+++++
T Consensus 63 ------~~~~~d~~gHGT~vAgiia~~~~---~~~g------~~GvAp~a~l~~~kv~~~~---------g~~~~~~i~~ 118 (280)
T 1dbi_A 63 ------DYDPMDLNNHGTHVAGIAAAETN---NATG------IAGMAPNTRILAVRALDRN---------GSGTLSDIAD 118 (280)
T ss_dssp ------BSCCCCSSSHHHHHHHHHHCCCS---SSSS------CCCSSSSCEEEEEECCCTT---------SCCCHHHHHH
T ss_pred ------CCCCCCCCCcHHHHHHHHhCcCC---CCCc------ceEeCCCCEEEEEEEECCC---------CCcCHHHHHH
Confidence 12456789999999999999742 2334 7889999999999999865 3578899999
Q ss_pred HHHHHHHcCCCeeEeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCCCCccCCCCccEEeccccCCceeEEE
Q 044993 227 AFDDAIHDGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTINNMAPWMLTVGASTMDREFAGY 306 (713)
Q Consensus 227 ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVgA~~~~~~~~~~ 306 (713)
||++|++.|++|||||||.. .....+..++.++.++|++||+||||+|......+...+++|+|||++.
T Consensus 119 ai~~a~~~g~~Vin~S~G~~----~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------- 187 (280)
T 1dbi_A 119 AIIYAADSGAEVINLSLGCD----CHTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQ------- 187 (280)
T ss_dssp HHHHHHHTTCSEEEECCSSC----CCCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECT-------
T ss_pred HHHHHHHCCCCEEEeCCCCC----CCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCC-------
Confidence 99999999999999999987 2346788899999999999999999999765555667799999998542
Q ss_pred EEeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccccCeEEEEEechhhHHHhhcCceEEEEc
Q 044993 307 ITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKGYEAAKKGAVAMITG 386 (713)
Q Consensus 307 ~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~k~~~~~~~Ga~g~i~~ 386 (713)
T Consensus 188 -------------------------------------------------------------------------------- 187 (280)
T 1dbi_A 188 -------------------------------------------------------------------------------- 187 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCccccccCCCCCCCCCCCCCCceeeCCCc
Q 044993 387 ASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVIAPGVN 466 (713)
Q Consensus 387 ~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~KPDI~APG~~ 466 (713)
.+.++.||++||.. ||+|||++
T Consensus 188 --------------------------------------------------~~~~~~~S~~G~~~--------dv~ApG~~ 209 (280)
T 1dbi_A 188 --------------------------------------------------YDRLASFSNYGTWV--------DVVAPGVD 209 (280)
T ss_dssp --------------------------------------------------TSCBCTTBCCSTTC--------CEEEECSS
T ss_pred --------------------------------------------------CCCcCCCCCCCCCc--------eEEEecCC
Confidence 24578899999865 99999999
Q ss_pred EEeeecCCCCCCCCcCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCccccCCCCC
Q 044993 467 IVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTARATDANNKPISEFNGKE 546 (713)
Q Consensus 467 I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~ 546 (713)
|+++++.. .|..++|||||||||||++|||++ |.+++.+||++|++||+++..
T Consensus 210 i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~------------ 262 (280)
T 1dbi_A 210 IVSTITGN-------------RYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISG------------ 262 (280)
T ss_dssp EEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTT------------
T ss_pred eEeecCCC-------------CEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCC------------
Confidence 99998763 899999999999999999999987 899999999999999998742
Q ss_pred CCCCccCccccCccCcCC
Q 044993 547 ATAFAYGSGHVDPNSALD 564 (713)
Q Consensus 547 ~~~~~~G~G~id~~~A~~ 564 (713)
....||+|+||+.+|++
T Consensus 263 -~~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 263 -TGTYFKYGRINSYNAVT 279 (280)
T ss_dssp -BTTTBSSEECCHHHHHT
T ss_pred -CCCcccCCEECHHHHhc
Confidence 23579999999999986
No 13
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=1.4e-51 Score=439.38 Aligned_cols=266 Identities=25% Similarity=0.303 Sum_probs=217.9
Q ss_pred CccccccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecccchhhhhcCCCCC
Q 044993 67 SNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRNPA 146 (713)
Q Consensus 67 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~~~~~~~~~~~~~ 146 (713)
++.+|+.+++|+||+|||||||||++||+|.+ +++..++|..++...
T Consensus 30 ~~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~--------------------------~~~~~~~~~~~~~~~------- 76 (327)
T 2x8j_A 30 APAVWRASAKGAGQIIGVIDTGCQVDHPDLAE--------------------------RIIGGVNLTTDYGGD------- 76 (327)
T ss_dssp HHHHHHHHGGGTTCEEEEEESCCCTTCTTTGG--------------------------GEEEEEECSSGGGGC-------
T ss_pred hHHHHhcCCCCCCCEEEEEcCCCCCCChhHhh--------------------------cccCCccccCCCCCC-------
Confidence 45899999999999999999999999999953 456666776543211
Q ss_pred CCCCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCCCHHHHHH
Q 044993 147 FDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIE 226 (713)
Q Consensus 147 ~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~~~~i~~ 226 (713)
...+.|..||||||||||+|.. +..| +.||||+|+|+.+|++... +.+..+++++
T Consensus 77 ------~~~~~d~~gHGT~VAgiia~~~----~~~g------~~GvAp~a~l~~~kv~~~~---------g~~~~~~i~~ 131 (327)
T 2x8j_A 77 ------ETNFSDNNGHGTHVAGTVAAAE----TGSG------VVGVAPKADLFIIKALSGD---------GSGEMGWIAK 131 (327)
T ss_dssp ------TTCCCCSSSHHHHHHHHHHCCC----CSSB------CCCSSTTCEEEEEECSCTT---------SEECHHHHHH
T ss_pred ------CCCCCCCCCchHHHHHHHhccC----CCCC------cEeeCCCCEEEEEEeECCC---------CCcCHHHHHH
Confidence 1234678999999999999972 2234 7889999999999999865 2577889999
Q ss_pred HHHHHHH------cCCCeeEeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCC-----CCccCCCCccEEec
Q 044993 227 AFDDAIH------DGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEP-----QTINNMAPWMLTVG 295 (713)
Q Consensus 227 ai~~a~~------~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~-----~~~~~~ap~vitVg 295 (713)
||++|++ .+++|||||||.. .....+..++.++.++|++||+||||+|... ...+...+++|+||
T Consensus 132 ai~~a~~~~~~~~~~~~Vin~S~G~~----~~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vg 207 (327)
T 2x8j_A 132 AIRYAVDWRGPKGEQMRIITMSLGGP----TDSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVG 207 (327)
T ss_dssp HHHHHHHCCCTTSCCCSEEEECEEBS----CCCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEE
T ss_pred HHHHHHhhcccccCCceEEEECCCcC----CCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEE
Confidence 9999999 9999999999987 2346788899999999999999999999642 23344568999999
Q ss_pred cccCCceeEEEEEeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccccCeEEEEEechhhHHH
Q 044993 296 ASTMDREFAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKGYEA 375 (713)
Q Consensus 296 A~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~k~~~~ 375 (713)
|++.
T Consensus 208 a~~~---------------------------------------------------------------------------- 211 (327)
T 2x8j_A 208 AVDF---------------------------------------------------------------------------- 211 (327)
T ss_dssp EECT----------------------------------------------------------------------------
T ss_pred EECC----------------------------------------------------------------------------
Confidence 8542
Q ss_pred hhcCceEEEEccCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCccccccCCCCCCCCCCC
Q 044993 376 AKKGAVAMITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSI 455 (713)
Q Consensus 376 ~~~Ga~g~i~~~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~ 455 (713)
.+.++.||++||.
T Consensus 212 -------------------------------------------------------------~~~~~~fS~~G~~------ 224 (327)
T 2x8j_A 212 -------------------------------------------------------------DLRLSDFTNTNEE------ 224 (327)
T ss_dssp -------------------------------------------------------------TCCBSCC---CCC------
T ss_pred -------------------------------------------------------------CCCCCCccCCCCC------
Confidence 2567899999985
Q ss_pred CCCceeeCCCcEEeeecCCCCCCCCcCCCCccceeeeccccchhhHHHHHHHHHHHh-----CCCCCHHHHHHHHHhccc
Q 044993 456 IKPDVIAPGVNIVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTV-----HPDWSPAAIKSAIMTTAR 530 (713)
Q Consensus 456 ~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-----~p~~sp~~ik~~L~~TA~ 530 (713)
|||+|||++|+++++.. .|..++|||||||||||++|||+|+ +|.|++.+||++|++||+
T Consensus 225 --~di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~tA~ 289 (327)
T 2x8j_A 225 --IDIVAPGVGIKSTYLDS-------------GYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLVRRAT 289 (327)
T ss_dssp --CSEEEECSSEEEECSTT-------------CEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHTTEE
T ss_pred --ceEecCcCceEeecCCC-------------CEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHhCc
Confidence 49999999999998763 7999999999999999999999999 999999999999999998
Q ss_pred ccCCCCCccccCCCCCCCCCccCccccCccCcCCC
Q 044993 531 ATDANNKPISEFNGKEATAFAYGSGHVDPNSALDP 565 (713)
Q Consensus 531 ~~~~~g~~~~~~~~~~~~~~~~G~G~id~~~A~~~ 565 (713)
++. .++..||+|+||+.+|++.
T Consensus 290 ~~g-------------~~~~~~G~G~vd~~~A~~~ 311 (327)
T 2x8j_A 290 PIG-------------FTAQAEGNGFLTLDLVERI 311 (327)
T ss_dssp CCS-------------SCHHHHTTCEECTTHHHHH
T ss_pred cCC-------------CCCCceeeeEECHHHHHHh
Confidence 763 2467899999999999983
No 14
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=6.6e-51 Score=424.91 Aligned_cols=259 Identities=27% Similarity=0.384 Sum_probs=218.9
Q ss_pred CccccccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecccchhhhhcCCCCC
Q 044993 67 SNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRNPA 146 (713)
Q Consensus 67 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~~~~~~~~~~~~~ 146 (713)
+..+|+.. +|+||+|+|||||||++||+|.+ +++..++|.++
T Consensus 20 ~~~aw~~~-~G~gv~VaViDtGvd~~h~~l~~--------------------------~~~~~~~~~~~----------- 61 (279)
T 1thm_A 20 APQAWDIA-EGSGAKIAIVDTGVQSNHPDLAG--------------------------KVVGGWDFVDN----------- 61 (279)
T ss_dssp HHHHHTTC-CCTTCEEEEEESCCCTTCTTTTT--------------------------TEEEEEETTTT-----------
T ss_pred hHHHHhcC-CCCCCEEEEEccCCCCCCcchhc--------------------------CccccccccCC-----------
Confidence 56899987 79999999999999999999964 35555666533
Q ss_pred CCCCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCCCHHHHHH
Q 044993 147 FDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIE 226 (713)
Q Consensus 147 ~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~~~~i~~ 226 (713)
...+.|..+|||||||||+|... +..| +.||||+|+|+.+|++... +.+..+++++
T Consensus 62 ------~~~~~d~~gHGT~vAgiia~~~~---n~~g------~~GvAp~a~l~~~~v~~~~---------g~~~~~~~~~ 117 (279)
T 1thm_A 62 ------DSTPQNGNGHGTHCAGIAAAVTN---NSTG------IAGTAPKASILAVRVLDNS---------GSGTWTAVAN 117 (279)
T ss_dssp ------BSCCCCSSSHHHHHHHHHHCCCS---SSSS------CCCSSTTCEEEEEECSCTT---------SCCCHHHHHH
T ss_pred ------CCCCCCCCCcHHHHHHHHhCccC---CCCc------cEEeCCCCEEEEEEeeCCC---------CCccHHHHHH
Confidence 12446789999999999999742 2334 7889999999999999865 3577889999
Q ss_pred HHHHHHHcCCCeeEeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCCCCccCCCCccEEeccccCCceeEEE
Q 044993 227 AFDDAIHDGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTINNMAPWMLTVGASTMDREFAGY 306 (713)
Q Consensus 227 ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVgA~~~~~~~~~~ 306 (713)
||++|++.|++|||||||.. .....+..++.++.++|++||+||||+|......+...+++|+|||++.
T Consensus 118 ai~~a~~~g~~Vin~S~G~~----~~~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------- 186 (279)
T 1thm_A 118 GITYAADQGAKVISLSLGGT----VGNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQ------- 186 (279)
T ss_dssp HHHHHHHTTCSEEEECCCBS----SCCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECT-------
T ss_pred HHHHHHHCCCCEEEEecCCC----CCCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCC-------
Confidence 99999999999999999987 2346788899999999999999999999766666667789999998542
Q ss_pred EEeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccccCeEEEEEechhhHHHhhcCceEEEEc
Q 044993 307 ITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKGYEAAKKGAVAMITG 386 (713)
Q Consensus 307 ~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~k~~~~~~~Ga~g~i~~ 386 (713)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 1thm_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCccccccCCCCCCCCCCCCCCceeeCCCc
Q 044993 387 ASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVIAPGVN 466 (713)
Q Consensus 387 ~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~KPDI~APG~~ 466 (713)
.+.++.||++||.. ||+|||++
T Consensus 187 --------------------------------------------------~~~~~~fS~~G~~~--------dv~APG~~ 208 (279)
T 1thm_A 187 --------------------------------------------------NDNKSSFSTYGSWV--------DVAAPGSS 208 (279)
T ss_dssp --------------------------------------------------TSCBCTTCCCCTTC--------CEEEECSS
T ss_pred --------------------------------------------------CCCcCCcCCCCCce--------EEEEcCCC
Confidence 24578899999865 99999999
Q ss_pred EEeeecCCCCCCCCcCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCccccCCCCC
Q 044993 467 IVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTARATDANNKPISEFNGKE 546 (713)
Q Consensus 467 I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~ 546 (713)
|+++++.. .|..++|||||||||||++||| ++|.+++.+||++|++||+++...
T Consensus 209 i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~----------- 262 (279)
T 1thm_A 209 IYSTYPTS-------------TYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGT----------- 262 (279)
T ss_dssp EEEEETTT-------------EEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTB-----------
T ss_pred eEEEeCCC-------------CEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCC-----------
Confidence 99998763 8999999999999999999999 589999999999999999987432
Q ss_pred CCCCccCccccCccCcCC
Q 044993 547 ATAFAYGSGHVDPNSALD 564 (713)
Q Consensus 547 ~~~~~~G~G~id~~~A~~ 564 (713)
...||+|+||+.+|++
T Consensus 263 --~~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 263 --GTYWAKGRVNAYKAVQ 278 (279)
T ss_dssp --TTTBSSEECCHHHHHH
T ss_pred --CccccCCeeCHHHHhc
Confidence 2478999999999975
No 15
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=1.1e-52 Score=453.49 Aligned_cols=313 Identities=20% Similarity=0.215 Sum_probs=199.9
Q ss_pred ccccccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecccchhhhhcCCCCCC
Q 044993 68 NSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRNPAF 147 (713)
Q Consensus 68 ~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 147 (713)
.++|+.+..|++|+|||||||||++||+|++....+....|...++.........+..+..... .++.......
T Consensus 21 ~~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---- 94 (357)
T 4h6x_A 21 ADLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDYAAFQSIRDQGL--KGKEKEEALE---- 94 (357)
T ss_dssp HHHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHHHHHHHHHHHTC--CSHHHHHHHH----
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCcccccccccccCccc--cccccccccc----
Confidence 4899999999999999999999999999998766666667776554221110000110000000 0000000000
Q ss_pred CCCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCCCHHHHHHH
Q 044993 148 DIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIEA 227 (713)
Q Consensus 148 ~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~~~~i~~a 227 (713)
....+..++.|.+||||||||||+|+.. .| +.||||+|+|+.+|++..... .. .+.+...+++++
T Consensus 95 ~~~~~~~~~~D~~gHGThVAGiiag~~~-----~g------~~GvAp~a~l~~~k~~~~~~~---~~-~~~~~~~~~~~a 159 (357)
T 4h6x_A 95 AVIPDTKDRIVLNDHACHVTSTIVGQEH-----SP------VFGIAPNCRVINMPQDAVIRG---NY-DDVMSPLNLARA 159 (357)
T ss_dssp HHCTTTHHHHHHHHHHHHHHHHHHCCTT-----SS------CCCSCTTSEEEEEECTTC--------------CHHHHHH
T ss_pred cccCCCCCCcCCCCcHHHHHHHHhccCC-----CC------ceEeeccceEEeeeecccCCC---Cc-cccccHHHHHHH
Confidence 0001123445678999999999999631 13 788999999999999754310 00 013456678999
Q ss_pred HHHHHHcCCCeeEeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCCCCccCCCCccEEeccccCCceeEEEE
Q 044993 228 FDDAIHDGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTINNMAPWMLTVGASTMDREFAGYI 307 (713)
Q Consensus 228 i~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVgA~~~~~~~~~~~ 307 (713)
|++|++.|++|||||||.........+.+..++.++.++|++||+||||+|......+...+++|+|||++.
T Consensus 160 i~~a~~~g~~Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~-------- 231 (357)
T 4h6x_A 160 IDLALELGANIIHCAFCRPTQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKV-------- 231 (357)
T ss_dssp HHHHHHTTCSEEEEC-----------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECT--------
T ss_pred HHHHHHcCCCEEeeccccCCccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEecc--------
Confidence 999999999999999998744445567788999999999999999999999766666667799999998542
Q ss_pred EeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccccCeEEEEEechhhHHHhhcCceEEEEcc
Q 044993 308 TLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKGYEAAKKGAVAMITGA 387 (713)
Q Consensus 308 ~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~k~~~~~~~Ga~g~i~~~ 387 (713)
T Consensus 232 -------------------------------------------------------------------------------- 231 (357)
T 4h6x_A 232 -------------------------------------------------------------------------------- 231 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCccccccCCCCCCCCCCCCCCceeeCCCcE
Q 044993 388 SGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVIAPGVNI 467 (713)
Q Consensus 388 ~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~KPDI~APG~~I 467 (713)
.+.++.||+||+.. .||||+|||++|
T Consensus 232 -------------------------------------------------~~~~~~fSn~G~~~-----~~~di~APG~~i 257 (357)
T 4h6x_A 232 -------------------------------------------------DGTPCHFSNWGGNN-----TKEGILAPGEEI 257 (357)
T ss_dssp -------------------------------------------------TSSBCTTCC---CT-----TTTEEEEECSSE
T ss_pred -------------------------------------------------CCcccccccCCCCC-----CccceeecCCCe
Confidence 25678999999753 589999999999
Q ss_pred EeeecCCCCCCCCcCCCCccceeeeccccchhhHHHHHHHHHHHh----CCCCCHHHHHHHHHhcccccCCCCCccccCC
Q 044993 468 VAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTV----HPDWSPAAIKSAIMTTARATDANNKPISEFN 543 (713)
Q Consensus 468 ~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~----~p~~sp~~ik~~L~~TA~~~~~~g~~~~~~~ 543 (713)
+++++.. ..|..++|||||||||||++|||+++ +|.|+++|||++|++||+++....
T Consensus 258 ~s~~~~~------------~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~~------- 318 (357)
T 4h6x_A 258 LGAQPCT------------EEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPEV------- 318 (357)
T ss_dssp EECCTTC------------SCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC---------------
T ss_pred EeccCCC------------CcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCCC-------
Confidence 9998764 26778999999999999999999965 568999999999999999875322
Q ss_pred CCCCCCCccCccccCccCcCC
Q 044993 544 GKEATAFAYGSGHVDPNSALD 564 (713)
Q Consensus 544 ~~~~~~~~~G~G~id~~~A~~ 564 (713)
...+.+||+|+||+.+|++
T Consensus 319 --~~~~~~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 319 --VEEPERCLRGFVNIPGAMK 337 (357)
T ss_dssp --------CTTCBCCHHHHHH
T ss_pred --CCCcccceeEEecHHHHHH
Confidence 2356789999999999998
No 16
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=6.2e-53 Score=478.84 Aligned_cols=308 Identities=18% Similarity=0.191 Sum_probs=40.6
Q ss_pred cceeEEecceeeeEEEEcCHHHHHHhhCCCCeEEEEeccccccCCCCCccccCCCcCCCCCCccccccCCCCCccEEEEe
Q 044993 6 ELISSSYRRHINGFAADLEEEHAQQLANHPEVVSVFLNKPTKKLTTGAWNFLGLEKDNVIPSNSTWEKARFGEDVIIGGI 85 (713)
Q Consensus 6 ~~i~~~y~~~~ng~s~~~~~~~~~~L~~~~~V~~V~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~G~Gv~VgVI 85 (713)
.+|++.|++.|+||+++++.+++++|+++|+|++|++++.++.+ ...|.+-.+.... .....|..+.+|+||+|+||
T Consensus 109 ~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v~~~-~~pWgL~~i~~~~--~~~~~w~~~~~G~GV~VaVI 185 (692)
T 2p4e_P 109 TKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFAQ-SIPWNLERITPPR--YRADEYQPPDGGSLVEVYLL 185 (692)
T ss_dssp CEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEEC------------------------------------
T ss_pred cceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEeccccccC-CCCcchhhccccc--ccccccccCCCCCCcEEEEE
Confidence 47899999999999999999999999999999999999987653 2234332222110 01246888899999999999
Q ss_pred ccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecccchhhhhcCCCCCCCCCCCCCCCCCCCCCchh
Q 044993 86 DSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRNPAFDIPPKLKTGRDLDGHGTH 165 (713)
Q Consensus 86 DtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGTh 165 (713)
|||||++||+|.+.-. | ..+.+..+.+ + ......+.|..|||||
T Consensus 186 DTGId~~HpdL~gr~~------~-------------------~~~~~~~d~d-----g------~~~~~~~~D~~GHGTH 229 (692)
T 2p4e_P 186 DTSIQSDHREIEGRVM------V-------------------TDFENVPEED-----G------TRFHRQASKCDSHGTH 229 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCCCChhhcCceE------e-------------------cccccccCCC-----C------CcccCCCCCCCCcHHH
Confidence 9999999999975210 0 0001110000 0 0001345678999999
Q ss_pred hhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCCCHHHHHHHHHHHHHc------CCCee
Q 044993 166 TLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIEAFDDAIHD------GVDII 239 (713)
Q Consensus 166 VAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~~~~i~~ai~~a~~~------gvdVI 239 (713)
|||||+|+ ..||||+|+|+.+|+++.. +.+..+++++||+|++++ |++||
T Consensus 230 VAGiIAg~---------------~~GVAP~A~L~~vKVl~~~---------G~g~~s~ii~aI~~a~~~~~~~~~g~~VI 285 (692)
T 2p4e_P 230 LAGVVSGR---------------DAGVAKGASMRSLRVLNCQ---------GKGTVSGTLIGLEFIRKSQLVQPVGPLVV 285 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhHhhcC---------------CCccCCCCEEEEEEeecCC---------CCCCHHHHHHHHHHHHhhhhcccCCceEE
Confidence 99999986 3579999999999999876 357788999999999986 89999
Q ss_pred EeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCCCC-ccCCCCccEEeccccCCceeEEEEEeCCceEEeec
Q 044993 240 TVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQT-INNMAPWMLTVGASTMDREFAGYITLGNNKRLRGA 318 (713)
Q Consensus 240 n~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~-~~~~ap~vitVgA~~~~~~~~~~~~~g~g~~~~g~ 318 (713)
|||||+. ....+..++.++.++|++||+||||+|..... .+...|++|+|||++.+...
T Consensus 286 NmSlGg~-----~s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~~~~vItVGA~d~~~~~--------------- 345 (692)
T 2p4e_P 286 LLPLAGG-----YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP--------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EecCCCC-----CcHHHHHHHHHHHHCCCEEEEECCCCCCCCCccCcccCCCEEEEEEEcCCCCc---------------
Confidence 9999976 23567788888999999999999999975432 24567999999986533200
Q ss_pred ccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccccCeEEEEEechhhHHHhhcCceEEEEccCCcccccCCcc
Q 044993 319 SLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKGYEAAKKGAVAMITGASGTFSASYGFL 398 (713)
Q Consensus 319 ~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~k~~~~~~~Ga~g~i~~~~g~~~~~~~~~ 398 (713)
T Consensus 346 -------------------------------------------------------------------------------- 345 (692)
T 2p4e_P 346 -------------------------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCccccccCCCCCCCCCCCCCCceeeCCCcEEeeecCCCCCC
Q 044993 399 PVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVIAPGVNIVAAYTSERGPT 478 (713)
Q Consensus 399 p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~KPDI~APG~~I~sa~~~~~~~~ 478 (713)
...-+.||++|| ||||+|||++|+++++...
T Consensus 346 --------------------------------------a~~ss~fSn~G~--------~vDI~APG~~I~St~~~~~--- 376 (692)
T 2p4e_P 346 --------------------------------------VTLGTLGTNFGR--------CVDLFAPGEDIIGASSDCS--- 376 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------cccccccCCCCC--------ceeEEecCCcEEeeccCCC---
Confidence 000123899998 4599999999999987632
Q ss_pred CCcCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccC
Q 044993 479 GYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTARATD 533 (713)
Q Consensus 479 ~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~ 533 (713)
..|..++|||||||||||++|||+|++|+|+|.+||++|++||.+..
T Consensus 377 --------~~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~qVk~~L~~tA~~~~ 423 (692)
T 2p4e_P 377 --------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDV 423 (692)
T ss_dssp -------------------------------------------------------
T ss_pred --------CceEeccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccc
Confidence 27899999999999999999999999999999999999999998753
No 17
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=6.1e-50 Score=424.81 Aligned_cols=282 Identities=25% Similarity=0.323 Sum_probs=223.6
Q ss_pred CccccccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecccchhhhhcCCCCC
Q 044993 67 SNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRNPA 146 (713)
Q Consensus 67 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~~~~~~~~~~~~~ 146 (713)
++.+|..+++|+||+|+|||||||++||+|.+ ++...++|.....
T Consensus 15 ~~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~--------------------------~~~~~~~~~~~~~--------- 59 (310)
T 2ixt_A 15 NNDTLTSTTGGSGINIAVLDTGVNTSHPDLVN--------------------------NVEQCKDFTGATT--------- 59 (310)
T ss_dssp TCTTCCCCCCCTTCEEEEEESCCCTTCTTTTT--------------------------TEEEEEESSSSSS---------
T ss_pred chhhhhccCCCCCcEEEEEecCCCCCCHHHhh--------------------------cccccccccCCCC---------
Confidence 34899999999999999999999999999964 3444555543310
Q ss_pred CCCCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCCCHHHHHH
Q 044993 147 FDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIE 226 (713)
Q Consensus 147 ~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~~~~i~~ 226 (713)
.......|..||||||||||+|... .+..| +.||||+|+|+.+|++... +.+..+++++
T Consensus 60 ----~~~~~~~d~~gHGT~vAgiia~~~~--~n~~g------~~GvAp~a~l~~~~v~~~~---------g~~~~~~~~~ 118 (310)
T 2ixt_A 60 ----PINNSCTDRNGHGTHVAGTALADGG--SDQAG------IYGVAPDADLWAYKVLLDS---------GSGYSDDIAA 118 (310)
T ss_dssp ----CEETCCCCSSSHHHHHHHHHHCBCC--TTSCS------CBCSCTTSEEEEEECSCTT---------SCCCHHHHHH
T ss_pred ----CCCCCCCCCCCCHHHHHHHHhccCC--CCCCc------eEEECCCCEEEEEEEEcCC---------CCCcHHHHHH
Confidence 0112345789999999999999742 12233 7899999999999999865 2568889999
Q ss_pred HHHHHHHcCC-----CeeEeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCCCC--ccCCCCccEEeccccC
Q 044993 227 AFDDAIHDGV-----DIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQT--INNMAPWMLTVGASTM 299 (713)
Q Consensus 227 ai~~a~~~gv-----dVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~--~~~~ap~vitVgA~~~ 299 (713)
+|++|++.++ +|||||||.. .....+..++.++.++|++||+||||+|....+ .+...+++|+|||++.
T Consensus 119 ai~~a~~~~~~~~~~~Vin~S~G~~----~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~ 194 (310)
T 2ixt_A 119 AIRHAADQATATGTKTIISMSLGSS----ANNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALEN 194 (310)
T ss_dssp HHHHHHHHHHHHTCCEEEEECCCBS----SCCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEE
T ss_pred HHHHHHHhhhccCCCeEEEEcCCCC----CCCHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEeccc
Confidence 9999999988 9999999998 235678888999999999999999999975433 3445689999998542
Q ss_pred CceeEEEEEeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccccCeEEEEEechhhHHHhhcC
Q 044993 300 DREFAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKGYEAAKKG 379 (713)
Q Consensus 300 ~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~k~~~~~~~G 379 (713)
..
T Consensus 195 ~~------------------------------------------------------------------------------ 196 (310)
T 2ixt_A 195 VQ------------------------------------------------------------------------------ 196 (310)
T ss_dssp EE------------------------------------------------------------------------------
T ss_pred cc------------------------------------------------------------------------------
Confidence 10
Q ss_pred ceEEEEccCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCC--ccccccCCCCCCCC----C
Q 044993 380 AVAMITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSP--AVASFSSRGPNRID----P 453 (713)
Q Consensus 380 a~g~i~~~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~a~fSS~GPt~~~----~ 453 (713)
..+ .++.||++||.... .
T Consensus 197 --------------------------------------------------------~~g~~~~~~~S~~G~~~~~g~~~~ 220 (310)
T 2ixt_A 197 --------------------------------------------------------QNGTYRVADYSSRGYISTAGDYVI 220 (310)
T ss_dssp --------------------------------------------------------ETTEEEECTTSCCCCTTTTTSSSC
T ss_pred --------------------------------------------------------cCCCeeeccccCCCCccCCccccc
Confidence 012 57889999995421 1
Q ss_pred CCCCCceeeCCCcEEeeecCCCCCCCCcCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccC
Q 044993 454 SIIKPDVIAPGVNIVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTARATD 533 (713)
Q Consensus 454 ~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~ 533 (713)
.+.||||+|||.+|+++++.. .|..++|||||||||||++|||+|++|+|++.+||++|++||++++
T Consensus 221 ~~~~~di~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 287 (310)
T 2ixt_A 221 QEGDIEISAPGSSVYSTWYNG-------------GYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVD 287 (310)
T ss_dssp CTTCCCEEEECSSEEEECTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTSC
T ss_pred cCCCeeEECCCCCEeeecCCC-------------CEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC
Confidence 345999999999999998763 7999999999999999999999999999999999999999999876
Q ss_pred CCCCccccCCCCCCCCCccCccccCc
Q 044993 534 ANNKPISEFNGKEATAFAYGSGHVDP 559 (713)
Q Consensus 534 ~~g~~~~~~~~~~~~~~~~G~G~id~ 559 (713)
..+. ......++..+|||++|+
T Consensus 288 ~~~~----~~a~~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 288 IKGG----YGAAIGDDYASGFGFARV 309 (310)
T ss_dssp CCBS----TTCCSSSBTTTBTCBCCC
T ss_pred CCCC----cccccCCccccccceeec
Confidence 4321 112456788999999986
No 18
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=2e-50 Score=429.87 Aligned_cols=266 Identities=27% Similarity=0.387 Sum_probs=219.9
Q ss_pred CccccccCCCCC--ccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecccchhhhhcCCC
Q 044993 67 SNSTWEKARFGE--DVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRN 144 (713)
Q Consensus 67 ~~~~~~~~~~G~--Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~~~~~~~~~~~ 144 (713)
++.+|+.+ +|+ ||+|||||||||++||+|.+ ++...++|..+...
T Consensus 17 ~~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~--------------------------~~~~~~~~~~~~~~------ 63 (320)
T 2z30_A 17 APSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAA--------------------------NIAWCVSTLRGKVS------ 63 (320)
T ss_dssp CGGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGG--------------------------GEEEEEECGGGCCB------
T ss_pred hHHHHHhc-CCCcCCeEEEEECCCCCCCChhHhc--------------------------ccccCccccCCccC------
Confidence 45899998 999 99999999999999999963 34445555433100
Q ss_pred CCCCCCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCCCHHHH
Q 044993 145 PAFDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDT 224 (713)
Q Consensus 145 ~~~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~~~~i 224 (713)
.......|..||||||||||+|. .+..| +.||||+|+|+.+|++... +.+..+++
T Consensus 64 ------~~~~~~~d~~gHGT~vAgiia~~----~n~~g------~~GvAp~a~l~~~~v~~~~---------g~~~~~~i 118 (320)
T 2z30_A 64 ------TKLRDCADQNGHGTHVIGTIAAL----NNDIG------VVGVAPGVQIYSVRVLDAR---------GSGSYSDI 118 (320)
T ss_dssp ------CCHHHHBCSSSHHHHHHHHHHCC----SSSBS------CCCSSTTCEEEEEECSCTT---------SEEEHHHH
T ss_pred ------CCCCCCCCCCCCHHHHHHHHHcc----cCCCc------eEeeCCCCEEEEEEeeCCC---------CCccHHHH
Confidence 00112356789999999999996 23334 7889999999999999765 35778899
Q ss_pred HHHHHHHHHc--------------------CCCeeEeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCCCCc
Q 044993 225 IEAFDDAIHD--------------------GVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTI 284 (713)
Q Consensus 225 ~~ai~~a~~~--------------------gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~ 284 (713)
+++|++|++. +++|||||||.. .....+..++.++.++|++||+||||+|......
T Consensus 119 ~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~----~~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~ 194 (320)
T 2z30_A 119 AIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGP----ADDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSY 194 (320)
T ss_dssp HHHHHHHHHTTTTCSCTTSSSCCTTCTTSCCCSEEEECEEBS----CCCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCB
T ss_pred HHHHHHHHhCcccccccccccccccccccCCceEEEecCCCC----CCCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCC
Confidence 9999999987 999999999998 2346788888999999999999999999776666
Q ss_pred cCCCCccEEeccccCCceeEEEEEeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccccCeEE
Q 044993 285 NNMAPWMLTVGASTMDREFAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRIL 364 (713)
Q Consensus 285 ~~~ap~vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv 364 (713)
....|++|+|||++.
T Consensus 195 Pa~~~~vi~Vga~~~----------------------------------------------------------------- 209 (320)
T 2z30_A 195 PAAYPEVIAVGAIDS----------------------------------------------------------------- 209 (320)
T ss_dssp TTTSTTEEEEEEECT-----------------------------------------------------------------
T ss_pred cccCCCeEEEEeeCC-----------------------------------------------------------------
Confidence 667899999998542
Q ss_pred EEEechhhHHHhhcCceEEEEccCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCcccccc
Q 044993 365 VCLHEEKGYEAAKKGAVAMITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFS 444 (713)
Q Consensus 365 l~~~~~k~~~~~~~Ga~g~i~~~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fS 444 (713)
.+.++.||
T Consensus 210 ------------------------------------------------------------------------~~~~~~~S 217 (320)
T 2z30_A 210 ------------------------------------------------------------------------NDNIASFS 217 (320)
T ss_dssp ------------------------------------------------------------------------TSCBCTTS
T ss_pred ------------------------------------------------------------------------CCCcCccc
Confidence 24578899
Q ss_pred CCCCCCCCCCCCCCceeeCCCcEEeeecCCCCCCCCcCCCCccceeeeccccchhhHHHHHHHHHHHhC-----------
Q 044993 445 SRGPNRIDPSIIKPDVIAPGVNIVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVH----------- 513 (713)
Q Consensus 445 S~GPt~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~----------- 513 (713)
++|| +|+|||++|+++++.. .|..++|||||||||||++|||+|++
T Consensus 218 ~~g~----------~v~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~ 274 (320)
T 2z30_A 218 NRQP----------EVSAPGVDILSTYPDD-------------SYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVG 274 (320)
T ss_dssp CSSC----------SEEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCC
T ss_pred CCCC----------CEEeCCCCeEEeccCC-------------CeEeccCHHHHHHHHHHHHHHHHHhchhhcccccccc
Confidence 9997 7899999999998763 89999999999999999999999999
Q ss_pred --CCCCHHHHHHHHHhcccccCCCCCccccCCCCCCCCCccCccccCccCcCCC
Q 044993 514 --PDWSPAAIKSAIMTTARATDANNKPISEFNGKEATAFAYGSGHVDPNSALDP 565 (713)
Q Consensus 514 --p~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~id~~~A~~~ 565 (713)
|.|++.+||++|++||+++.. +..+..||||+||+.+|++.
T Consensus 275 ~~p~lt~~~v~~~L~~ta~~~~~-----------~g~~~~~G~G~vd~~~A~~~ 317 (320)
T 2z30_A 275 TFDDISKNTVRGILHITADDLGP-----------TGWDADYGYGVVRAALAVQA 317 (320)
T ss_dssp CTTCCSTTSHHHHHHHHSBCCSS-----------SSSBTTTBTCBCCHHHHHHH
T ss_pred cCCCCCHHHHHHHHHhhCccCCC-----------CCCCCCcCCceeCHHHHHHH
Confidence 999999999999999998743 22467899999999999873
No 19
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=1.4e-50 Score=423.75 Aligned_cols=267 Identities=21% Similarity=0.257 Sum_probs=210.9
Q ss_pred CCCC-CccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecccchhhhhcCCCCCCCCCCC
Q 044993 74 ARFG-EDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRNPAFDIPPK 152 (713)
Q Consensus 74 ~~~G-~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~ 152 (713)
.++| +||+|||||||||++||+|++. .+..+++... ..
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~--------------------------~~~~~~~~~~---------------~~ 41 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGA--------------------------DLTVLPTLAP---------------TA 41 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTC--------------------------EEEECCCSSC---------------CC
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCC--------------------------eeecCcCCCC---------------CC
Confidence 3578 7999999999999999999642 1211222111 00
Q ss_pred CCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCCCHHHHHHHHHHHH
Q 044993 153 LKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIEAFDDAI 232 (713)
Q Consensus 153 ~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~~~~i~~ai~~a~ 232 (713)
.....|..||||||||||+|+.. .| +.||||+|+|+.+|++.+.. +.....+++++|+||+
T Consensus 42 ~~~d~~~~gHGT~VAGiiag~~~-----~~------~~GvAp~a~l~~~kv~~~~~--------~~~~~~~i~~ai~~a~ 102 (282)
T 3zxy_A 42 ARSDGFMSAHGTHVASIIFGQPE-----TS------VPGIAPQCRGLIVPIFSDDR--------RRITQLDLARGIERAV 102 (282)
T ss_dssp CCTTCHHHHHHHHHHHHHHCCTT-----SS------SCCSSTTSEEEEEECSCSSS--------SCCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCcccceeehhhccCC-----ce------eeeeccccceEeeEeecccc--------ccchHHHHHHHHHHhh
Confidence 11223457899999999999631 13 78899999999999987552 2577888999999999
Q ss_pred HcCCCeeEeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCCCCccCCCCccEEeccccCCceeEEEEEeCCc
Q 044993 233 HDGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTINNMAPWMLTVGASTMDREFAGYITLGNN 312 (713)
Q Consensus 233 ~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVgA~~~~~~~~~~~~~g~g 312 (713)
+.+++|||||||...........+..++..+.++|+++|+||||+|......+...+++|+|||++.
T Consensus 103 ~~~~~Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~------------- 169 (282)
T 3zxy_A 103 NAGAHIINISGGELTDFGEADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDD------------- 169 (282)
T ss_dssp HTTCSEEEECCCEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECT-------------
T ss_pred ccCCeEEeccCccccccccccHHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcC-------------
Confidence 9999999999997633333455678889999999999999999999776666667899999998542
Q ss_pred eEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccccCeEEEEEechhhHHHhhcCceEEEEccCCccc
Q 044993 313 KRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKGYEAAKKGAVAMITGASGTFS 392 (713)
Q Consensus 313 ~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~k~~~~~~~Ga~g~i~~~~g~~~ 392 (713)
T Consensus 170 -------------------------------------------------------------------------------- 169 (282)
T 3zxy_A 170 -------------------------------------------------------------------------------- 169 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCccccccCCCCCCCCCCCCCCceeeCCCcEEeeec
Q 044993 393 ASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVIAPGVNIVAAYT 472 (713)
Q Consensus 393 ~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~KPDI~APG~~I~sa~~ 472 (713)
.+.++.||+||+. ..||||+|||.+|+++++
T Consensus 170 --------------------------------------------~~~~~~~S~~~~~-----~~~~di~ApG~~i~s~~~ 200 (282)
T 3zxy_A 170 --------------------------------------------HGHPLDFSNWGST-----YEQQGILAPGEDILGAKP 200 (282)
T ss_dssp --------------------------------------------TSCBCSSSCCCHH-----HHHHEEEEECSSEEEECT
T ss_pred --------------------------------------------CCccccccCCCCC-----ccccceeccCcceeeecC
Confidence 2557789999864 458899999999999988
Q ss_pred CCCCCCCCcCCCCccceeeeccccchhhHHHHHHHHHHHhC----CCCCHHHHHHHHHhcccccCCCCCccccCCCCCCC
Q 044993 473 SERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVH----PDWSPAAIKSAIMTTARATDANNKPISEFNGKEAT 548 (713)
Q Consensus 473 ~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~----p~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~ 548 (713)
.+ .|..++|||||||||||++|||+|++ |.++|++||++|++||++++.. .+..
T Consensus 201 ~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~~---------~~~~ 258 (282)
T 3zxy_A 201 GG-------------GTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDDD---------APEQ 258 (282)
T ss_dssp TS-------------CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC----------------
T ss_pred CC-------------ceeecCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCCC---------CCCc
Confidence 74 79999999999999999999999875 7899999999999999876432 1335
Q ss_pred CCccCccccCccCcCC
Q 044993 549 AFAYGSGHVDPNSALD 564 (713)
Q Consensus 549 ~~~~G~G~id~~~A~~ 564 (713)
...+|+|+||+.+|++
T Consensus 259 ~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 259 ARRCLAGRLNVSGAFT 274 (282)
T ss_dssp CGGGTTCBCCHHHHHH
T ss_pred cCceeeeEeCHHHHHH
Confidence 6789999999999987
No 20
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=7.1e-49 Score=466.06 Aligned_cols=356 Identities=21% Similarity=0.188 Sum_probs=250.2
Q ss_pred CCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCCCHHHHHHHHHHHHH---
Q 044993 157 RDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIEAFDDAIH--- 233 (713)
Q Consensus 157 ~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~~~~i~~ai~~a~~--- 233 (713)
.|+.||||||||||+|.. +..| +.||||+|+|+.+|++.... +..+....++++|.+|++
T Consensus 267 ~D~~GHGThVAGIIAa~~----N~~g------~~GVAP~AkI~~vKVld~~~-------g~~~t~s~l~~AI~~Aid~a~ 329 (1354)
T 3lxu_X 267 GMSSPHGTHVSSIASGNH----SSRD------VDGVAPNAKIVSMTIGDGRL-------GSMETGTALVRAMTKVMELCR 329 (1354)
T ss_dssp ECCCHHHHHHHHHHCCCC----SSSS------SCCSCTTCEEEEEECBCTTT-------SSCBCHHHHHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHhcCC----CCCC------ceeecCCCEEEEEEeccCCC-------CcccChHHHHHHHHHHHHHHh
Confidence 467899999999999984 2334 78899999999999987542 112456788888888887
Q ss_pred --cCCCeeEeecCCCCCCCCCcchHHHHHHHHh-cCCcEEEEecCCCCCCCCCccCC----CCccEEeccccCCceeEEE
Q 044993 234 --DGVDIITVSLGYDNIADFLSDGVVIGAFHAT-MNGVLTVAASGNGGPEPQTINNM----APWMLTVGASTMDREFAGY 306 (713)
Q Consensus 234 --~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~-~~Gv~vV~AAGN~G~~~~~~~~~----ap~vitVgA~~~~~~~~~~ 306 (713)
.|++|||||||... .....+.+..++.++. ++|++||+||||+|+...++..+ .+++|+|||++........
T Consensus 330 ~~~gadVINmS~G~~~-~~~~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ 408 (1354)
T 3lxu_X 330 DGRRIDVINMSYGEHA-NWSNSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAE 408 (1354)
T ss_dssp TTCCCCEEEECCCCCC-SCSSCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC-
T ss_pred hcCCceEEEcCCccCC-CCCccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCcccc
Confidence 79999999999983 2233567888888886 89999999999999765554432 5899999997644211000
Q ss_pred EEeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccccCeEEEEEechhhHHHhhcCceEEEEc
Q 044993 307 ITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKGYEAAKKGAVAMITG 386 (713)
Q Consensus 307 ~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~k~~~~~~~Ga~g~i~~ 386 (713)
...
T Consensus 409 ys~----------------------------------------------------------------------------- 411 (1354)
T 3lxu_X 409 YAM----------------------------------------------------------------------------- 411 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 000
Q ss_pred cCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCccccccCCCCCCCCCCCCCCceeeCCCc
Q 044993 387 ASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVIAPGVN 466 (713)
Q Consensus 387 ~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~KPDI~APG~~ 466 (713)
.....+.++.|||+||+. ++++||||+|||++
T Consensus 412 ----------------------------------------------~~~~~g~~asFSS~GPt~--dg~~KpDIaAPG~~ 443 (1354)
T 3lxu_X 412 ----------------------------------------------REKLPGNVYTWTSRDPCI--DGGQGVTVCAPGGA 443 (1354)
T ss_dssp ----------------------------------------------------CCCCCCCCSCCS--SSSCCEEEEEEC--
T ss_pred ----------------------------------------------ccCCCCccccccCCCCCc--cCCCcceEEecCce
Confidence 000136789999999998 89999999999999
Q ss_pred EEeeecCCCCCCCCcCCCCccceeeeccccchhhHHHHHHHHHHH----hCCCCCHHHHHHHHHhcccccCCCCCccccC
Q 044993 467 IVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKT----VHPDWSPAAIKSAIMTTARATDANNKPISEF 542 (713)
Q Consensus 467 I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~~p~~sp~~ik~~L~~TA~~~~~~g~~~~~~ 542 (713)
|+++..... ..|..++|||||||||||++|||++ .+|+|++.+||++|++||+++..
T Consensus 444 I~St~~~~~-----------~~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~-------- 504 (1354)
T 3lxu_X 444 IASVPQFTM-----------SKSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGY-------- 504 (1354)
T ss_dssp ------------------------CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTT--------
T ss_pred EEEeecCCC-----------CceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCC--------
Confidence 999865421 2789999999999999999999986 79999999999999999988642
Q ss_pred CCCCCCCCccCccccCccCcCCCCeeecCCccccccccccCCCccc-eeeeeecCCCCCCCCCCCCCCCCCCceEEeecC
Q 044993 543 NGKEATAFAYGSGHVDPNSALDPGLVYDLTLDDYLGYLCNRGYKED-VVKKFVVDPAKHPCPKSFELANFNYPSIAIPEL 621 (713)
Q Consensus 543 ~~~~~~~~~~G~G~id~~~A~~~~lv~~~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ln~ps~~~~~~ 621 (713)
.+++.||||+||+.+|++..+.|+..+.+++.|+|..+.+.. .|.+- . + ..
T Consensus 505 ----~~~~~~G~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~~~~~rgIylR--~-----------------~-----~~ 556 (1354)
T 3lxu_X 505 ----VDPFAQGHGLLNVEKAFEHLTEHRQSKDNMLRFSVRVGNNADKGIHLR--Q-----------------G-----VQ 556 (1354)
T ss_dssp ----SCTTTSSSSBCCHHHHHHHHHTTTTCGGGGEEEEEEETTTTBSSEEEC--S-----------------S-----CC
T ss_pred ----CCcccccCCEeCHHHHHHHHHhcCCCCccceEEEEEecCCCCCceEEe--c-----------------c-----cc
Confidence 246789999999999999999999999999999999885322 22110 0 0 00
Q ss_pred CceEEEEEE----EEecC---C--CceEE--EEEeCCCceeEEEecCeEEEecCCcEEEEEEEEEeccCCCCCCCCCeEE
Q 044993 622 AGSVTVTRK----LKNVG---T--PGTYK--AQVKEIPGISTDVEPSSLTFTHVNEEKTFKITFTLAQNAKPNATNDYVF 690 (713)
Q Consensus 622 ~~~~t~~~t----vtn~~---~--~~ty~--~~~~~~~g~~v~~~p~~l~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~~ 690 (713)
....+++++ +.|.. . ...|. +.+... ..+-.-|+.|.+ .++.++|.|.++.+. +..+.++
T Consensus 557 ~~~~~~tv~V~p~f~~~~~~~~~~~i~f~~~l~L~~t--~~wv~~p~~l~l--~~~~r~~~v~vDp~~-----L~~G~h~ 627 (1354)
T 3lxu_X 557 RNSIDYNVYIEPIFYNDKEADPKDKFNFNVRLNLIAS--QPWVQCGAFLDL--SYGTRSIAVRVDPTG-----LQPGVHS 627 (1354)
T ss_dssp CSCEEEEEEEEEEESSCSCSSSTTCSCCCCEEEEEES--STTEEECSCEEC--TTSCEEEEEEECGGG-----CCSEEEE
T ss_pred CCceEEEEEEeeeecCcccCChhhccceEEEEEEecC--CCceecccceee--cCCCceEEEEECCCC-----CCCccee
Confidence 122333333 32211 1 22222 222222 123334888877 578899999998876 5668899
Q ss_pred EEEEEEc-----CCcEEEeeEEEEee
Q 044993 691 GELIWSD-----GTHRVRSPIALKQK 711 (713)
Q Consensus 691 G~l~~~~-----~~~~v~~P~~~~~~ 711 (713)
+.|...| .++.+|+||.|...
T Consensus 628 ~~v~~~D~~~~~~gp~f~ipvTv~~P 653 (1354)
T 3lxu_X 628 AVIRAYDTDCVQKGSLFEIPVTVVQP 653 (1354)
T ss_dssp EEEEEEESSCTTSCCSEEEEEEEEEC
T ss_pred EEEEEEEcCCcccCceEEeeEEEEee
Confidence 9999875 26899999998765
No 21
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=5.1e-50 Score=424.84 Aligned_cols=274 Identities=24% Similarity=0.304 Sum_probs=218.4
Q ss_pred ccccccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecccchhhhhcCCCCCC
Q 044993 68 NSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRNPAF 147 (713)
Q Consensus 68 ~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 147 (713)
+++|+.+..++||+|||||||||++||+|.+. .+....+|..+.
T Consensus 11 ~~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~-------------------------~~~~~~~~~~~~----------- 54 (306)
T 4h6w_A 11 KKLWSETRGDPKICVAVLDGIVDQNHPCFIGA-------------------------DLTRLPSLVSGE----------- 54 (306)
T ss_dssp HHHHHHCSCCTTCEEEEESSCCCTTSGGGTTC-------------------------EEEECC-----------------
T ss_pred HHHHhhhCCCCCCEEEEEcCCCCCCChhHcCC-------------------------cccCCCcccCCC-----------
Confidence 48999987779999999999999999999642 122222232221
Q ss_pred CCCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCCCHHHHHHH
Q 044993 148 DIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIEA 227 (713)
Q Consensus 148 ~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~~~~i~~a 227 (713)
.....|..||||||||||+|+.. .| +.||||+|+|+.+|++.+.. +.+....++++
T Consensus 55 -----~~~~~d~~gHGThVAGiiag~~~-----~~------~~GVAp~a~l~~~kv~~~~~--------~~~~~~~i~~a 110 (306)
T 4h6w_A 55 -----ANANGSMSTHGTHVASIIFGQHD-----SP------VTGIAPQCRGLIVPVFADES--------LKLSQLDLSRA 110 (306)
T ss_dssp ---------CCCCHHHHHHHHHHHCCTT-----SS------SCCSSTTSEEEECCCCCSSS--------CCCCHHHHHHH
T ss_pred -----CCCCCCCCCchHHHHHHHHcccc-----CC------cceeccccccceeecccccc--------ccchHHHHHHH
Confidence 11234678999999999999631 13 78899999999999987652 36778889999
Q ss_pred HHHHHHcCCCeeEeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCCCCccCCCCccEEeccccCCceeEEEE
Q 044993 228 FDDAIHDGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTINNMAPWMLTVGASTMDREFAGYI 307 (713)
Q Consensus 228 i~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVgA~~~~~~~~~~~ 307 (713)
|++|++.+++|||+|||...........+..++..+.++|++||++|||+|......+...+++|+|||++.
T Consensus 111 i~~a~~~g~~vi~~s~g~~~~~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~-------- 182 (306)
T 4h6w_A 111 IEQAVNNGANIINVSAGQLTDAGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDD-------- 182 (306)
T ss_dssp HHHHHHTTCSEEEECCCEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECT--------
T ss_pred HHHhhcccceeeeccccccccCCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecC--------
Confidence 999999999999999997633334456688889999999999999999999766555666789999998542
Q ss_pred EeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccccCeEEEEEechhhHHHhhcCceEEEEcc
Q 044993 308 TLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKGYEAAKKGAVAMITGA 387 (713)
Q Consensus 308 ~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~k~~~~~~~Ga~g~i~~~ 387 (713)
T Consensus 183 -------------------------------------------------------------------------------- 182 (306)
T 4h6w_A 183 -------------------------------------------------------------------------------- 182 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCccccccCCCCCCCCCCCCCCceeeCCCcE
Q 044993 388 SGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVIAPGVNI 467 (713)
Q Consensus 388 ~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~KPDI~APG~~I 467 (713)
.+.++.||++|+. ..||||+|||++|
T Consensus 183 -------------------------------------------------~~~~~~~s~~g~~-----~~~~di~APG~~i 208 (306)
T 4h6w_A 183 -------------------------------------------------QGKPVDFSNWGDA-----YQKQGILAPGKDI 208 (306)
T ss_dssp -------------------------------------------------TSCBCSSSCBCHH-----HHHHEEEEECSSE
T ss_pred -------------------------------------------------CCCccccccccCC-----cCcceeecCCcCc
Confidence 2456788999864 4588999999999
Q ss_pred EeeecCCCCCCCCcCCCCccceeeeccccchhhHHHHHHHHHHHh----CCCCCHHHHHHHHHhcccccCCCCCccccCC
Q 044993 468 VAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTV----HPDWSPAAIKSAIMTTARATDANNKPISEFN 543 (713)
Q Consensus 468 ~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~----~p~~sp~~ik~~L~~TA~~~~~~g~~~~~~~ 543 (713)
+++.+.+ .|..++|||||||||||++|||+++ +|.|+|+|||++|++||+++...+
T Consensus 209 ~s~~~~~-------------~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~------- 268 (306)
T 4h6w_A 209 LGAKPNG-------------GTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKD------- 268 (306)
T ss_dssp EEECTTS-------------CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTT-------
T ss_pred ccccCCC-------------ceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCC-------
Confidence 9998874 7999999999999999999999865 599999999999999999875433
Q ss_pred CCCCCCCccCccccCccCcCCC
Q 044993 544 GKEATAFAYGSGHVDPNSALDP 565 (713)
Q Consensus 544 ~~~~~~~~~G~G~id~~~A~~~ 565 (713)
..+...||+|+||+.+|++.
T Consensus 269 --~~~~~~~G~G~ln~~~Av~~ 288 (306)
T 4h6w_A 269 --TDDQSRCLMGKLNILDAIEH 288 (306)
T ss_dssp --CSCGGGGTTCBCCHHHHHHH
T ss_pred --CCCCCCcceeecCHHHHHHH
Confidence 22456799999999999983
No 22
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=4.1e-49 Score=437.34 Aligned_cols=295 Identities=27% Similarity=0.337 Sum_probs=225.6
Q ss_pred Cccccc-cCCCCCccEEEEeccccCC------CCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecccchhhh
Q 044993 67 SNSTWE-KARFGEDVIIGGIDSGICP------ESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISA 139 (713)
Q Consensus 67 ~~~~~~-~~~~G~Gv~VgVIDtGid~------~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~~~~~~ 139 (713)
++.+|+ .+++|+||+|||||||||+ .||+|.+ +++..++|.+.
T Consensus 10 ~~~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~--------------------------~i~~~~~~~~~---- 59 (434)
T 1wmd_A 10 ADVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRG--------------------------KITALYALGRT---- 59 (434)
T ss_dssp HHHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTT--------------------------CEEEEEETTTT----
T ss_pred chhhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCC--------------------------CEeeeccccCC----
Confidence 458998 7999999999999999999 7999953 34444445321
Q ss_pred hcCCCCCCCCCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCC
Q 044993 140 ATKRNPAFDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDC 219 (713)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~ 219 (713)
..+.|..||||||||||+|+.. + +.||||+|+|+.+|++..... ...
T Consensus 60 --------------~~~~d~~gHGT~VAgiiag~g~------~------~~GvAp~a~l~~~~v~~~~g~-------~~~ 106 (434)
T 1wmd_A 60 --------------NNANDTNGHGTHVAGSVLGNGS------T------NKGMAPQANLVFQSIMDSGGG-------LGG 106 (434)
T ss_dssp --------------TCCCCSSSHHHHHHHHHHCCSS------S------SCCSSTTSEEEEEECCCTTSS-------CTT
T ss_pred --------------CCCCCCCCcHHHHHHHHHcCCC------C------ceeeCCCCEEEEEEeecCCCc-------ccc
Confidence 2456788999999999998621 2 678999999999999876511 011
Q ss_pred CHHHHHHHHHHHHHcCCCeeEeecCCCCCCCCCcchHHHHHHHH-hcCCcEEEEecCCCCCCCCCcc--CCCCccEEecc
Q 044993 220 MEQDTIEAFDDAIHDGVDIITVSLGYDNIADFLSDGVVIGAFHA-TMNGVLTVAASGNGGPEPQTIN--NMAPWMLTVGA 296 (713)
Q Consensus 220 ~~~~i~~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a-~~~Gv~vV~AAGN~G~~~~~~~--~~ap~vitVgA 296 (713)
..+++.++|++|++.|++|||||||..... ..++...+++++ .++|++||+||||+|....++. ..++++|+|||
T Consensus 107 ~~~~~~~ai~~a~~~g~~Vin~S~G~~~~~--~~~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga 184 (434)
T 1wmd_A 107 LPSNLQTLFSQAYSAGARIHTNSWGAAVNG--AYTTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGA 184 (434)
T ss_dssp SCSSHHHHHHHHHHTTCSEEEECCCBCCTT--CCCHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEE
T ss_pred ccHHHHHHHHHHHhcCCeEEEecCCCCcCC--cCCHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEec
Confidence 456799999999999999999999987311 224566777766 5899999999999997654444 45689999999
Q ss_pred ccCCceeEEEEEeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccccCeEEEEEechhhHHHh
Q 044993 297 STMDREFAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKGYEAA 376 (713)
Q Consensus 297 ~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~k~~~~~ 376 (713)
++..+... .
T Consensus 185 ~~~~~~~~-----------------------------~------------------------------------------ 193 (434)
T 1wmd_A 185 TENLRPSF-----------------------------G------------------------------------------ 193 (434)
T ss_dssp ECCSCGGG-----------------------------C------------------------------------------
T ss_pred ccccCccc-----------------------------C------------------------------------------
Confidence 76432100 0
Q ss_pred hcCceEEEEccCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCccccccCCCCCCCCCCCC
Q 044993 377 KKGAVAMITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSII 456 (713)
Q Consensus 377 ~~Ga~g~i~~~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~ 456 (713)
......+.++.||++||+. ++++
T Consensus 194 -------------------------------------------------------~~~~~~~~~a~fS~~G~~~--~g~~ 216 (434)
T 1wmd_A 194 -------------------------------------------------------SYADNINHVAQFSSRGPTK--DGRI 216 (434)
T ss_dssp -------------------------------------------------------GGGSCTTSBCTTSCCCCCT--TSCC
T ss_pred -------------------------------------------------------cccCCCCccccccCCCCCC--CCCC
Confidence 0001146789999999998 8999
Q ss_pred CCceeeCCCcEEeeecCCCCCCCCcCCCCccceeeeccccchhhHHHHHHHHHHHhCCCC-----CHHHHHHHHHhcccc
Q 044993 457 KPDVIAPGVNIVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDW-----SPAAIKSAIMTTARA 531 (713)
Q Consensus 457 KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~-----sp~~ik~~L~~TA~~ 531 (713)
||||+|||++|+++.+........ .......|..++|||||||||||++|||+|++|++ ++++||++|++||++
T Consensus 217 kpdi~ApG~~i~s~~~~~~~~~~~-~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~ 295 (434)
T 1wmd_A 217 KPDVMAPGTFILSARSSLAPDSSF-WANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAAD 295 (434)
T ss_dssp CCCEEEECSSEEEECCTTCCGGGS-SEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBC
T ss_pred CceEEcCCCCeEecCCCCCCCccc-ccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcc
Confidence 999999999999998653210000 00012479999999999999999999999999865 899999999999987
Q ss_pred cCCCCCccccCCCCCCCCCccCccccCccCcCCCC
Q 044993 532 TDANNKPISEFNGKEATAFAYGSGHVDPNSALDPG 566 (713)
Q Consensus 532 ~~~~g~~~~~~~~~~~~~~~~G~G~id~~~A~~~~ 566 (713)
+.. ..+++.||||++|+.+|++..
T Consensus 296 ~~~-----------~~~~~~~G~G~vd~~~a~~~~ 319 (434)
T 1wmd_A 296 IGL-----------GYPNGNQGWGRVTLDKSLNVA 319 (434)
T ss_dssp CSS-----------CSSCTTTTTCBCCHHHHHTCE
T ss_pred cCC-----------CCCCccCCcCeEeHHHhcccc
Confidence 531 346789999999999999754
No 23
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=7.9e-50 Score=430.55 Aligned_cols=271 Identities=21% Similarity=0.166 Sum_probs=216.6
Q ss_pred CccccccCCCCC--ccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecccchhhhhcCCC
Q 044993 67 SNSTWEKARFGE--DVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRN 144 (713)
Q Consensus 67 ~~~~~~~~~~G~--Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~~~~~~~~~~~ 144 (713)
+..+|+. .+|+ ||+||||||||| +||+|.+ +++..++|.++..
T Consensus 32 ~~~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~--------------------------~~~~~~~~~~~~~------- 76 (347)
T 2iy9_A 32 LTETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSD--------------------------SEFAKFSFTQDGS------- 76 (347)
T ss_dssp CCHHHHH-TSCTTSCCEEEEEESCCC-CCGGGTT--------------------------CEEEEEECBTTCC-------
T ss_pred hHHHHHH-hcCCCCCCEEEEEcCCCc-CChhhhc--------------------------CcccCCcccCCCC-------
Confidence 3489998 8999 999999999999 9999964 3445555653210
Q ss_pred CCCCCCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCCCHHHH
Q 044993 145 PAFDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDT 224 (713)
Q Consensus 145 ~~~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~~~~i 224 (713)
+.....+.|..||||||||||+|+ .| +.||||+|+|+.+|++... +.. ++
T Consensus 77 -----~~~~~~~~d~~gHGT~vAgiia~~-------~g------~~GvAp~a~l~~~~v~~~~----------~~~--~~ 126 (347)
T 2iy9_A 77 -----PFPVKKSEALYIHGTAMASLIASR-------YG------IYGVYPHALISSRRVIPDG----------VQD--SW 126 (347)
T ss_dssp -----SSCCSSSHHHHHHHHHHHHHHHCS-------SS------SCCSSTTCEEEEEECCSSB----------CTT--HH
T ss_pred -----CCCCCCCCCCCCcHHHHHHHHhcc-------cC------CcccCCCCEEEEEEEecCC----------CHH--HH
Confidence 001224456789999999999996 24 6889999999999999765 122 89
Q ss_pred HHHHHHHHHc------CCCeeEeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCC-------CCccCCCC--
Q 044993 225 IEAFDDAIHD------GVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEP-------QTINNMAP-- 289 (713)
Q Consensus 225 ~~ai~~a~~~------gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~-------~~~~~~ap-- 289 (713)
++||++|+++ |++|||||||... .......+..++..+.++|++||+||||+|... .......+
T Consensus 127 ~~ai~~a~~~~~~~~~~~~Vin~S~G~~~-~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~ 205 (347)
T 2iy9_A 127 IRAIESIMSNVFLAPGEEKIINISGGQKG-VASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPV 205 (347)
T ss_dssp HHHHHHHHTCTTSCTTEEEEEEESSCBCC-C-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCC
T ss_pred HHHHHHHHhhhhcccCCceEEEeccccCC-CCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccc
Confidence 9999999999 9999999999872 223556788899999999999999999999742 33344557
Q ss_pred --------ccEEeccccC--CceeEEEEEeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccc
Q 044993 290 --------WMLTVGASTM--DREFAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKV 359 (713)
Q Consensus 290 --------~vitVgA~~~--~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~ 359 (713)
++|+|||++. +...
T Consensus 206 ~~~~~~~~~vi~Vga~~~~~~g~~-------------------------------------------------------- 229 (347)
T 2iy9_A 206 SSVNKKQDPVIRVAALAQYRKGET-------------------------------------------------------- 229 (347)
T ss_dssp SHHHHHTCCEEEEEEECCCCTTSC--------------------------------------------------------
T ss_pred cccccccCCEEEEEEcccCCCCce--------------------------------------------------------
Confidence 9999998654 2100
Q ss_pred cCeEEEEEechhhHHHhhcCceEEEEccCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCc
Q 044993 360 QGRILVCLHEEKGYEAAKKGAVAMITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPA 439 (713)
Q Consensus 360 ~gkivl~~~~~k~~~~~~~Ga~g~i~~~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 439 (713)
......
T Consensus 230 --------------------------------------------------------------------------~~~~~~ 235 (347)
T 2iy9_A 230 --------------------------------------------------------------------------PVLHGG 235 (347)
T ss_dssp --------------------------------------------------------------------------CCBCCC
T ss_pred --------------------------------------------------------------------------ecccCC
Confidence 000134
Q ss_pred cccccCCCCCCCCCCCCCCceeeCCCcEEeeecCCCCCCCCcCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHH
Q 044993 440 VASFSSRGPNRIDPSIIKPDVIAPGVNIVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPA 519 (713)
Q Consensus 440 ~a~fSS~GPt~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~ 519 (713)
++.||++||+ ||||+|||++|+++++.. .|..++|||||||||||++|||+|++|+|++.
T Consensus 236 ~~~fS~~G~~-------~~di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~~ 295 (347)
T 2iy9_A 236 GITGSRFGNN-------WVDIAAPGQNITFLRPDA-------------KTGTGSGTSEATAIVSGVLAAMTSCNPRATAT 295 (347)
T ss_dssp SSSCBCBCTT-------TCSEEEECSSEEEECTTS-------------CEEEECSHHHHHHHHHHHHHHHHHHCTTSCHH
T ss_pred CCCCCCCCCC-------CCEEEeCCCCeEeecCCC-------------CeEeccchHHHHHHHHHHHHHHHHhCCCCCHH
Confidence 5799999984 679999999999999863 79999999999999999999999999999999
Q ss_pred HHHHHHHhcccccCCCCCccccCCCCCCCCCccCccccCccCcCCC
Q 044993 520 AIKSAIMTTARATDANNKPISEFNGKEATAFAYGSGHVDPNSALDP 565 (713)
Q Consensus 520 ~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~id~~~A~~~ 565 (713)
+||++|++||+++... ....+|+|+||+.+|++.
T Consensus 296 ~v~~~L~~tA~~~~~~------------~~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 296 ELKRTLLESADKYPSL------------VDKVTEGRVLNAEKAISM 329 (347)
T ss_dssp HHHHHHHHHSEECGGG------------TTTSGGGEECCHHHHHHH
T ss_pred HHHHHHHHhCccCCCC------------CCccccCCEecHHHHHHH
Confidence 9999999999987532 235899999999999984
No 24
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=1.8e-48 Score=418.98 Aligned_cols=300 Identities=24% Similarity=0.307 Sum_probs=220.3
Q ss_pred CCCccccccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCc-ccccccc---eeeeecccchhhhh
Q 044993 65 IPSNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYG-VECNRKL---IGIRHYNKGLISAA 140 (713)
Q Consensus 65 ~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~-~~~n~ki---~g~~~~~~~~~~~~ 140 (713)
+.+..+|+.+++|+||+||||||||+ +||+|.+.- +.+......... ...+.+. .....+.+.+...
T Consensus 19 i~~~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~-------~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~- 89 (340)
T 3lpc_A 19 VKADKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANV-------LPGYDFISNSQISLDGDGRDADPFDEGDWFDNWACG- 89 (340)
T ss_dssp CCHHHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGB-------CCCEECCCCHHHHCSSSSSBSCCBCCCCCBCTTTTS-
T ss_pred CCHHHHHHhcCCCCCeEEEEEcCCCC-CChhhhccc-------ccCccccCCccccccCCCccCCcccccccccccccc-
Confidence 34679999999999999999999998 999996421 011000000000 0000000 0000000000000
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCCC
Q 044993 141 TKRNPAFDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCM 220 (713)
Q Consensus 141 ~~~~~~~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~ 220 (713)
..+.+.....|..||||||||||+|... +..| +.||||+|+|+.+|++... +..
T Consensus 90 -------~~~~~~~~~~d~~gHGT~vAgiia~~~~---~~~g------~~GvAp~a~l~~~~v~~~~----------~~~ 143 (340)
T 3lpc_A 90 -------GRPDPRKERSDSSWHGSHVAGTIAAVTN---NRIG------VAGVAYGAKVVPVRALGRC----------GGY 143 (340)
T ss_dssp -------CTTCGGGSCBCCCCHHHHHHHHHHCCCS---SSSS------CCCTTTTSEEEEEECCBTT----------BCC
T ss_pred -------CCCCcccCCCCCCCCHHHHHHHHHccCC---CCCc------ceeecCCCEEEEEEEecCC----------CCc
Confidence 0011122356789999999999999742 3334 7889999999999999866 478
Q ss_pred HHHHHHHHHHHHH----------cCCCeeEeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCCC-CccCCCC
Q 044993 221 EQDTIEAFDDAIH----------DGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQ-TINNMAP 289 (713)
Q Consensus 221 ~~~i~~ai~~a~~----------~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~-~~~~~ap 289 (713)
.++++++|++|++ .+++|||||||.. ......+..++.++.++|++||+||||+|.... ......+
T Consensus 144 ~~~~~~ai~~a~~~~~~~~~~~~~~~~Vin~S~G~~---~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~ 220 (340)
T 3lpc_A 144 DSDISDGLYWAAGGRIAGIPENRNPAKVINMSLGSD---GQCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCN 220 (340)
T ss_dssp HHHHHHHHHHHHTCCCTTSCCCSSCCSEEEECCCEE---SCCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSS
T ss_pred HHHHHHHHHHHhcccccccccccCCCeEEEeCcCCC---CCcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCC
Confidence 8899999999998 8999999999986 123456788889999999999999999986532 2345678
Q ss_pred ccEEeccccCCceeEEEEEeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccccCeEEEEEec
Q 044993 290 WMLTVGASTMDREFAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHE 369 (713)
Q Consensus 290 ~vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~ 369 (713)
++|+|||++.
T Consensus 221 ~vi~Vga~~~---------------------------------------------------------------------- 230 (340)
T 3lpc_A 221 NVLSVGATTS---------------------------------------------------------------------- 230 (340)
T ss_dssp SCEEEEEECT----------------------------------------------------------------------
T ss_pred ceEEEecCCC----------------------------------------------------------------------
Confidence 9999998542
Q ss_pred hhhHHHhhcCceEEEEccCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCccccccCCCCC
Q 044993 370 EKGYEAAKKGAVAMITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPN 449 (713)
Q Consensus 370 ~k~~~~~~~Ga~g~i~~~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt 449 (713)
.+.++.||++||
T Consensus 231 -------------------------------------------------------------------~~~~~~~S~~g~- 242 (340)
T 3lpc_A 231 -------------------------------------------------------------------RGIRASFSNYGV- 242 (340)
T ss_dssp -------------------------------------------------------------------TSSBCTTCCBST-
T ss_pred -------------------------------------------------------------------CCCcCCCCCCCC-
Confidence 256789999997
Q ss_pred CCCCCCCCCceeeCCCcEEeeecCCCCCCCCcCCCCccceeeeccccchhhHHHHHHHHHHHh-C---CCCCHHHHHHHH
Q 044993 450 RIDPSIIKPDVIAPGVNIVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTV-H---PDWSPAAIKSAI 525 (713)
Q Consensus 450 ~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-~---p~~sp~~ik~~L 525 (713)
||||+|||.+|+++++..... .....|..++|||||||||||++|||+|+ + |.|++.+||++|
T Consensus 243 -------~~di~ApG~~i~s~~~~~~~~------~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L 309 (340)
T 3lpc_A 243 -------DVDLAAPGQDILSTVDSGTRR------PVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVL 309 (340)
T ss_dssp -------TCCEEEECSSEEEEEESCSSS------CCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred -------CceEEecCCCeecccCCCCcC------CCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHH
Confidence 459999999999998864321 12236999999999999999999999998 5 999999999999
Q ss_pred HhcccccCCCCCccccCCCCCCCCCccCccccCccCcCCC
Q 044993 526 MTTARATDANNKPISEFNGKEATAFAYGSGHVDPNSALDP 565 (713)
Q Consensus 526 ~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~id~~~A~~~ 565 (713)
++||+++.. .++..||||+||+.+||+.
T Consensus 310 ~~tA~~~~~------------~~~~~~G~G~vd~~~Av~~ 337 (340)
T 3lpc_A 310 VSTTSPFNG------------RLDRALGSGIVDAEAAVNS 337 (340)
T ss_dssp HHTCBCCSS------------CCSSCCCSSBCCHHHHHHH
T ss_pred HhcCCcCCC------------CCCCCcccceecHHHHHHH
Confidence 999988641 2466899999999999874
No 25
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=4.2e-48 Score=445.41 Aligned_cols=302 Identities=21% Similarity=0.212 Sum_probs=208.4
Q ss_pred CCCccccccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecccchhhhhcCCC
Q 044993 65 IPSNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRN 144 (713)
Q Consensus 65 ~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~~~~~~~~~~~ 144 (713)
+.+..+|..+++|+||+|||||||||++||+|.+. .+.+.++|.++.
T Consensus 57 in~~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~-------------------------~~~~~~~~~~~~-------- 103 (600)
T 2oxa_A 57 LNLWWAHRTGVLGHGVNVAVVDDGLAIAHPDLADN-------------------------VRPGSKNVVTGS-------- 103 (600)
T ss_dssp CCCHHHHHTTCSCTTCEEEEESSCCCTTCTTTGGG-------------------------BCSCCBCTTTCS--------
T ss_pred cChHHHHhcCCCCCCcEEEEecCCcCCCCcchhhc-------------------------cccCceeccCCC--------
Confidence 45779999999999999999999999999999642 112233443321
Q ss_pred CCCCCCCCCCCCCC-CCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCCC-HH
Q 044993 145 PAFDIPPKLKTGRD-LDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCM-EQ 222 (713)
Q Consensus 145 ~~~~~~~~~~~~~d-~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~-~~ 222 (713)
....|.| ..||||||||||+|. .+..| +.||||+|+|+.+|++.... ... ..
T Consensus 104 -------~d~~p~d~~~gHGT~vAGiiaa~----~n~~g------~~GVAp~A~l~~vkv~~~~~---------~~~~~~ 157 (600)
T 2oxa_A 104 -------DDPTPTDPDTGHGTSVSGIIAAV----DNAIG------TKGIAPRAQLQGFNLLDDNS---------QQLQKD 157 (600)
T ss_dssp -------SCCCCCSTTCCHHHHHHHHHHCC----SSSSS------CCCSSTTCEEEEECTTSTTC---------CCCHHH
T ss_pred -------CCCCCCCCCCCCccHHHHHhhcc----cCCCc------ceEEccCCceEEEeeecCcc---------cchHHH
Confidence 1123344 789999999999997 22334 78899999999999998651 222 24
Q ss_pred HHHHHHHHHHHcCCCeeEeecCCCCCCCCCcchH----HHHHHH---HhcCCcEEEEecCCCCCCCC-------------
Q 044993 223 DTIEAFDDAIHDGVDIITVSLGYDNIADFLSDGV----VIGAFH---ATMNGVLTVAASGNGGPEPQ------------- 282 (713)
Q Consensus 223 ~i~~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~----~~a~~~---a~~~Gv~vV~AAGN~G~~~~------------- 282 (713)
.+++....+..++++|||||||.........+.+ ..++.. +.++|++||+||||+|+...
T Consensus 158 ~~~~~~~~a~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~ 237 (600)
T 2oxa_A 158 WLYALGDSNASRDNRVFNHSYRMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGP 237 (600)
T ss_dssp HHHHTTTSHHHHTCSEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSS
T ss_pred HHHHHhhhhcccCCeEEEEeccCCCCCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCccccc
Confidence 4455545578899999999999873222222222 222222 44789999999999985310
Q ss_pred ---------CccCCCCccEEeccccCCceeEEEEEeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCC
Q 044993 283 ---------TINNMAPWMLTVGASTMDREFAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGT 353 (713)
Q Consensus 283 ---------~~~~~ap~vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~ 353 (713)
...+.++|+|+|||++.
T Consensus 238 ~~p~~~~n~~~~~~s~~vItVgA~~~------------------------------------------------------ 263 (600)
T 2oxa_A 238 KLPFENSNLDPSNSNFWNLVVSALNA------------------------------------------------------ 263 (600)
T ss_dssp CCCSSBTTSSGGGGSSSEEEEEEECT------------------------------------------------------
T ss_pred cccccccccCCcccCceeEEEecccC------------------------------------------------------
Confidence 01112445666665321
Q ss_pred CCcccccCeEEEEEechhhHHHhhcCceEEEEccCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceecc
Q 044993 354 LDRKKVQGRILVCLHEEKGYEAAKKGAVAMITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFA 433 (713)
Q Consensus 354 ~~~~~~~gkivl~~~~~k~~~~~~~Ga~g~i~~~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~ 433 (713)
T Consensus 264 -------------------------------------------------------------------------------- 263 (600)
T 2oxa_A 264 -------------------------------------------------------------------------------- 263 (600)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCccccccCCCCCCCCCCCCCCceeeCCCcEEeeec-------CCCC--CC------------CCcCCCCccceeee
Q 044993 434 IEPSPAVASFSSRGPNRIDPSIIKPDVIAPGVNIVAAYT-------SERG--PT------------GYARDNRRFAFTAM 492 (713)
Q Consensus 434 ~~~~~~~a~fSS~GPt~~~~~~~KPDI~APG~~I~sa~~-------~~~~--~~------------~~~~~~~~~~y~~~ 492 (713)
.+.++.||++||+. ||+|||++|.++.+ .... .. ....+.....|..+
T Consensus 264 ---~g~~a~fS~~G~~v--------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 332 (600)
T 2oxa_A 264 ---DGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVM 332 (600)
T ss_dssp ---TSSBCTTCCBCTTE--------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEE
T ss_pred ---CCCcCCcCCCCCCe--------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCccccccc
Confidence 35688999999987 99999998544322 1100 00 00011122358999
Q ss_pred ccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCccc--------------------cCCCCCCCCCcc
Q 044993 493 DGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTARATDANNKPIS--------------------EFNGKEATAFAY 552 (713)
Q Consensus 493 sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~g~~~~--------------------~~~~~~~~~~~~ 552 (713)
+|||||||||||++|||+|++|+|+|++||++|++||++++....++. ........++.|
T Consensus 333 sGTS~AaP~VAGvaALl~s~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~~~~ 412 (600)
T 2oxa_A 333 NGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTY 412 (600)
T ss_dssp CSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTT
T ss_pred ccchHHhHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCccccccC
Confidence 999999999999999999999999999999999999999865432211 111223356889
Q ss_pred CccccCccCcCCCCeeec
Q 044993 553 GSGHVDPNSALDPGLVYD 570 (713)
Q Consensus 553 G~G~id~~~A~~~~lv~~ 570 (713)
|||+||+.+|++....+.
T Consensus 413 G~G~vda~~Av~~A~~~~ 430 (600)
T 2oxa_A 413 GFGLIDVNKALELAANHQ 430 (600)
T ss_dssp BTCBCCHHHHHHHHTTCC
T ss_pred CCchhhHHHHHHHHHhcc
Confidence 999999999999544333
No 26
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=3.3e-47 Score=397.31 Aligned_cols=237 Identities=25% Similarity=0.341 Sum_probs=200.8
Q ss_pred CccccccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecccchhhhhcCCCCC
Q 044993 67 SNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRNPA 146 (713)
Q Consensus 67 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~~~~~~~~~~~~~ 146 (713)
...+|..+++|+||+|+|||||||++||+|.+ +++..++|.++
T Consensus 18 ~~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~--------------------------~~~~~~~~~~~----------- 60 (284)
T 1sh7_A 18 LDRNYNANFDGFGVTAYVIDTGVNNNHEEFGG--------------------------RSVSGYDFVDN----------- 60 (284)
T ss_dssp CCSBCCCSCCCTTCEEEEEESCCCTTCTTTTT--------------------------CEEEEEETTTT-----------
T ss_pred chhhhhcCCCCCCCEEEEEcCCCCCCChhHcC--------------------------CccccccccCC-----------
Confidence 45789999999999999999999999999964 34445555432
Q ss_pred CCCCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCCCHHHHHH
Q 044993 147 FDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIE 226 (713)
Q Consensus 147 ~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~~~~i~~ 226 (713)
...+.|..||||||||||+|. ..||||+|+|+.+|++... +.+..+++++
T Consensus 61 ------~~~~~d~~gHGT~vAgiia~~---------------~~GvAp~a~l~~~kv~~~~---------g~~~~~~~~~ 110 (284)
T 1sh7_A 61 ------DADSSDCNGHGTHVAGTIGGS---------------QYGVAKNVNIVGVRVLSCS---------GSGTTSGVIS 110 (284)
T ss_dssp ------BSCCCCSSSHHHHHHHHHHCT---------------TTCSSTTCEEEEEECBCTT---------SCBCHHHHHH
T ss_pred ------CCCCCCCCCcHHHHHHHHhcc---------------cCCcCCCCEEEEEEeeCCC---------CCcCHHHHHH
Confidence 124567899999999999986 2569999999999999865 3577889999
Q ss_pred HHHHHHHc--CCCeeEeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCCC-CccCCCCccEEeccccCCcee
Q 044993 227 AFDDAIHD--GVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQ-TINNMAPWMLTVGASTMDREF 303 (713)
Q Consensus 227 ai~~a~~~--gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~-~~~~~ap~vitVgA~~~~~~~ 303 (713)
||+|+++. +++|||||||.. ....+..++.++.++|++||+||||+|.... ..+...+++|+|||++.
T Consensus 111 ai~~a~~~~~~~~Vin~S~G~~-----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~---- 181 (284)
T 1sh7_A 111 GVDWVAQNASGPSVANMSLGGG-----QSTALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTS---- 181 (284)
T ss_dssp HHHHHHHHCCSSEEEEECCCBS-----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECT----
T ss_pred HHHHHHhCCCCCcEEEeCCCCC-----CCHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecC----
Confidence 99999984 799999999987 2467888999999999999999999996432 33445789999998542
Q ss_pred EEEEEeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccccCeEEEEEechhhHHHhhcCceEE
Q 044993 304 AGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKGYEAAKKGAVAM 383 (713)
Q Consensus 304 ~~~~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~k~~~~~~~Ga~g~ 383 (713)
T Consensus 182 -------------------------------------------------------------------------------- 181 (284)
T 1sh7_A 182 -------------------------------------------------------------------------------- 181 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEccCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCccccccCCCCCCCCCCCCCCceeeC
Q 044993 384 ITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVIAP 463 (713)
Q Consensus 384 i~~~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~KPDI~AP 463 (713)
.+.++.||++||.. ||+||
T Consensus 182 -----------------------------------------------------~~~~~~~S~~G~~~--------di~Ap 200 (284)
T 1sh7_A 182 -----------------------------------------------------SDSRSSFSNWGSCV--------DLFAP 200 (284)
T ss_dssp -----------------------------------------------------TSBBCTTCCBSTTC--------CEEEE
T ss_pred -----------------------------------------------------CCCcCcccCCCCcc--------EEEec
Confidence 25678899999965 99999
Q ss_pred CCcEEeeecCCCCCCCCcCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccC
Q 044993 464 GVNIVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTARATD 533 (713)
Q Consensus 464 G~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~ 533 (713)
|++|+++++.. .|..++|||||||||||++|||+|++|+|++.|||++|++||++..
T Consensus 201 G~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 257 (284)
T 1sh7_A 201 GSQIKSAWYDG-------------GYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENK 257 (284)
T ss_dssp CSSEEEECTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred cCCeEEecCCC-------------CEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCC
Confidence 99999998763 7999999999999999999999999999999999999999998763
No 27
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=1e-46 Score=393.10 Aligned_cols=238 Identities=26% Similarity=0.332 Sum_probs=199.9
Q ss_pred CccccccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecccchhhhhcCCCCC
Q 044993 67 SNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRNPA 146 (713)
Q Consensus 67 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~~~~~~~~~~~~~ 146 (713)
...+|..+++|+||+|+|||||||++||+|.+ ++...++|.++
T Consensus 20 ~~~~~~~~~~G~gv~VaViDtGid~~Hpdl~~--------------------------~~~~~~d~~~~----------- 62 (278)
T 2b6n_A 20 LDNNYHTDYDGSGVTAFVIDTGVLNTHNEFGG--------------------------RASSGYDFIDN----------- 62 (278)
T ss_dssp CCSEEECSCCCTTCEEEEEESCCCTTCGGGTT--------------------------CEEEEEETTTT-----------
T ss_pred cchhcccCCCCCCCEEEEEeCCCCCCChhHhc--------------------------ccccCeecCCC-----------
Confidence 45789999999999999999999999999964 23444555432
Q ss_pred CCCCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCCCHHHHHH
Q 044993 147 FDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIE 226 (713)
Q Consensus 147 ~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~~~~i~~ 226 (713)
..++.|..||||||||||+|. ..||||+|+|+.+|++... +.+..+++++
T Consensus 63 ------~~~~~d~~gHGT~vAgiia~~---------------~~GvAp~a~i~~~~v~~~~---------g~~~~~~~~~ 112 (278)
T 2b6n_A 63 ------DYDATDCNGHGTHVAGTIGGS---------------TYGVAKNVNVVGVRVLNCS---------GSGSNSGVIA 112 (278)
T ss_dssp ------BSCCCCSSSHHHHHHHHHHCT---------------TTCSSTTCEEEEEECSCTT---------SCCCHHHHHH
T ss_pred ------CCCCCCCCCcHHHHHHHHHCC---------------CcCCCCCCeEEEEEEECCC---------CCccHHHHHH
Confidence 123567899999999999986 3569999999999999865 2577899999
Q ss_pred HHHHHHH--cCCCeeEeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCCC-CccCCCCccEEeccccCCcee
Q 044993 227 AFDDAIH--DGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQ-TINNMAPWMLTVGASTMDREF 303 (713)
Q Consensus 227 ai~~a~~--~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~-~~~~~ap~vitVgA~~~~~~~ 303 (713)
+|+|+++ .+++|||||||... ...+..++.++.++|++||+||||+|.... ..+...+++|+|||++.
T Consensus 113 ai~~a~~~~~g~~Vin~S~G~~~-----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~---- 183 (278)
T 2b6n_A 113 GINWVKNNASGPAVANMSLGGGA-----SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTS---- 183 (278)
T ss_dssp HHHHHHHHCCSSEEEEECCCEEC-----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT----
T ss_pred HHHHHHhCCCCCeEEEECCCCCc-----CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCC----
Confidence 9999998 59999999999871 467888899999999999999999996432 23445789999998542
Q ss_pred EEEEEeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccccCeEEEEEechhhHHHhhcCceEE
Q 044993 304 AGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKGYEAAKKGAVAM 383 (713)
Q Consensus 304 ~~~~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~k~~~~~~~Ga~g~ 383 (713)
T Consensus 184 -------------------------------------------------------------------------------- 183 (278)
T 2b6n_A 184 -------------------------------------------------------------------------------- 183 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEccCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCccccccCCCCCCCCCCCCCCceeeC
Q 044993 384 ITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVIAP 463 (713)
Q Consensus 384 i~~~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~KPDI~AP 463 (713)
.+.++.||++||.. ||+||
T Consensus 184 -----------------------------------------------------~~~~~~~S~~G~~~--------di~Ap 202 (278)
T 2b6n_A 184 -----------------------------------------------------NDSRSSFSNYGTCL--------DIYAP 202 (278)
T ss_dssp -----------------------------------------------------TSBBCTTCCBSTTC--------CEEEE
T ss_pred -----------------------------------------------------CCCcCCcCCCCCCC--------eEEeC
Confidence 24578899999854 99999
Q ss_pred CCcEEeeecCCCCCCCCcCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccc
Q 044993 464 GVNIVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTARAT 532 (713)
Q Consensus 464 G~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~ 532 (713)
|++|++++.... ..|..++|||||||||||++|||+|++|+|++.+||++|++||++.
T Consensus 203 G~~i~s~~~~~~-----------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 260 (278)
T 2b6n_A 203 GSSITSSWYTSN-----------SATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATAD 260 (278)
T ss_dssp CSSEEEECTTST-----------TCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEES
T ss_pred CCCeECcccCCC-----------CCEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccC
Confidence 999999986531 2789999999999999999999999999999999999999999875
No 28
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=1.4e-46 Score=392.07 Aligned_cols=237 Identities=28% Similarity=0.343 Sum_probs=201.4
Q ss_pred CccccccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecccchhhhhcCCCCC
Q 044993 67 SNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRNPA 146 (713)
Q Consensus 67 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~~~~~~~~~~~~~ 146 (713)
...+|..+.+|+||+|+|||||||++||+|.+ ++...++|..
T Consensus 20 ~~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~--------------------------~~~~~~~~~~------------ 61 (276)
T 4dzt_A 20 LSNSYTYTATGRGVNVYVIDTGIRTTHREFGG--------------------------RARVGYDALG------------ 61 (276)
T ss_dssp CCSCEECSCCCTTCEEEEEESCCCTTCGGGTT--------------------------CEEEEEETTS------------
T ss_pred cccceecCCCCCCcEEEEEccCCCCCChhHcc--------------------------CeeccccCCC------------
Confidence 45889999999999999999999999999964 2343444432
Q ss_pred CCCCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCCCHHHHHH
Q 044993 147 FDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIE 226 (713)
Q Consensus 147 ~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~~~~i~~ 226 (713)
..+.|..||||||||||+|. ..||||+|+|+.+|++... +....+++++
T Consensus 62 -------~~~~d~~gHGT~vAgiiag~---------------~~GvAp~a~l~~~~v~~~~---------~~~~~~~~~~ 110 (276)
T 4dzt_A 62 -------GNGQDCNGHGTHVAGTIGGV---------------TYGVAKAVNLYAVRVLDCN---------GSGSTSGVIA 110 (276)
T ss_dssp -------SCSCCSSSHHHHHHHHHHCT---------------TTCSSTTCEEEEEECSCTT---------SCCCHHHHHH
T ss_pred -------CCCCCCCCCHHHHHHHHHcc---------------ccCCCCCCEEEEEEEeCCC---------CCcCHHHHHH
Confidence 23456789999999999986 3579999999999999876 3578899999
Q ss_pred HHHHHHHc--CCCeeEeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCCCCc-cCCCCccEEeccccCCcee
Q 044993 227 AFDDAIHD--GVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTI-NNMAPWMLTVGASTMDREF 303 (713)
Q Consensus 227 ai~~a~~~--gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~-~~~ap~vitVgA~~~~~~~ 303 (713)
+|+++++. +++|||||||.. ....+..++.++.++|+++|+||||+|...... +...+++|+|||++.
T Consensus 111 ai~~~~~~~~~~~vin~S~g~~-----~~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~---- 181 (276)
T 4dzt_A 111 GVDWVTRNHRRPAVANMSLGGG-----VSTALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTS---- 181 (276)
T ss_dssp HHHHHHHHCCSSEEEEECCCEE-----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT----
T ss_pred HHHHHHhcCCCCeEEEECCCCC-----CCHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECC----
Confidence 99999997 899999999987 246788899999999999999999999654322 456789999998532
Q ss_pred EEEEEeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccccCeEEEEEechhhHHHhhcCceEE
Q 044993 304 AGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKGYEAAKKGAVAM 383 (713)
Q Consensus 304 ~~~~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~k~~~~~~~Ga~g~ 383 (713)
T Consensus 182 -------------------------------------------------------------------------------- 181 (276)
T 4dzt_A 182 -------------------------------------------------------------------------------- 181 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEccCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCccccccCCCCCCCCCCCCCCceeeC
Q 044993 384 ITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVIAP 463 (713)
Q Consensus 384 i~~~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~KPDI~AP 463 (713)
.+.++.||++||.. ||+||
T Consensus 182 -----------------------------------------------------~~~~~~~S~~g~~~--------dv~Ap 200 (276)
T 4dzt_A 182 -----------------------------------------------------SDARASFSNYGSCV--------DLFAP 200 (276)
T ss_dssp -----------------------------------------------------TSBBCTTCCBSTTC--------CEEEE
T ss_pred -----------------------------------------------------CCCcCCcCCCCCCc--------eEEeC
Confidence 25678999999976 99999
Q ss_pred CCcEEeeecCCCCCCCCcCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccC
Q 044993 464 GVNIVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTARATD 533 (713)
Q Consensus 464 G~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~ 533 (713)
|++|++++.... ..|..++|||||||+|||++|||+|++|++++.+||++|++||++..
T Consensus 201 G~~i~s~~~~~~-----------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 259 (276)
T 4dzt_A 201 GASIPSAWYTSD-----------TATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGR 259 (276)
T ss_dssp CSSEEEECTTSS-----------SCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred CCCeEccccCCC-----------CceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCc
Confidence 999999987642 27899999999999999999999999999999999999999999864
No 29
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=4.8e-46 Score=416.26 Aligned_cols=295 Identities=18% Similarity=0.213 Sum_probs=219.3
Q ss_pred CCCccccccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecccchhhhhcCCC
Q 044993 65 IPSNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRN 144 (713)
Q Consensus 65 ~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~~~~~~~~~~~ 144 (713)
+.+..+|+.+++|+||+|||||||||++||+|.+. + .....++|.++.
T Consensus 25 i~~~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~------------------~------~~~~~~d~~~~~-------- 72 (471)
T 1p8j_A 25 LNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGN------------------Y------DPGASFDVNDQD-------- 72 (471)
T ss_dssp CCCHHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGG------------------B------CGGGCEETTTTB--------
T ss_pred CChHHHHhcCCCCCCCEEEEEeCCcCCCChhHhhc------------------c------CccCcccccCCC--------
Confidence 45679999999999999999999999999999642 0 011133443321
Q ss_pred CCCCCCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCCCHHHH
Q 044993 145 PAFDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDT 224 (713)
Q Consensus 145 ~~~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~~~~i 224 (713)
..+.+...+.|..+|||||||||+|... +..| +.||||+|+|+.+|++. +..+++
T Consensus 73 ---~~p~~~~~~~d~~gHGT~vAGiiaa~~~---n~~g------~~GvAp~a~i~~~rv~~-------------g~~~~~ 127 (471)
T 1p8j_A 73 ---PDPQPRYTQMNDNRHGTRCAGEVAAVAN---NGVC------GVGVAYNARIGGVRMLD-------------GEVTDA 127 (471)
T ss_dssp ---SCCCCCCCTTCTTCHHHHHHHHHHCCSS---SSSS------CCCTTTTSEEEEEECSS-------------SCCCHH
T ss_pred ---CCCCCccCCCCCCCcHHHHHHHHHeecc---CCCC------CEEECCCCeEEEEEccC-------------CchhHH
Confidence 0111122456789999999999999742 2234 78899999999999974 235679
Q ss_pred HHHHHHHHH-cCCCeeEeecCCCCCCC---CCcchHHHHHHHHhc-----CCcEEEEecCCCCCCCCCc----cCCCCcc
Q 044993 225 IEAFDDAIH-DGVDIITVSLGYDNIAD---FLSDGVVIGAFHATM-----NGVLTVAASGNGGPEPQTI----NNMAPWM 291 (713)
Q Consensus 225 ~~ai~~a~~-~gvdVIn~SlG~~~~~~---~~~~~~~~a~~~a~~-----~Gv~vV~AAGN~G~~~~~~----~~~ap~v 291 (713)
++|++++++ ++++|||||||...... .....+..++.++.+ +|++||+||||+|...... ...++++
T Consensus 128 ~~ai~~a~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~v 207 (471)
T 1p8j_A 128 VEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYT 207 (471)
T ss_dssp HHHHHHTSCTTTCCEEEECCBSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTE
T ss_pred HHHHHhhhccCCCeEEEeccCcCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCce
Confidence 999999999 99999999999863211 112335556666653 6999999999999653221 1235789
Q ss_pred EEeccccCCceeEEEEEeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccccCeEEEEEechh
Q 044993 292 LTVGASTMDREFAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEK 371 (713)
Q Consensus 292 itVgA~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~k 371 (713)
|+|||++.
T Consensus 208 ItVgA~~~------------------------------------------------------------------------ 215 (471)
T 1p8j_A 208 LSISSATQ------------------------------------------------------------------------ 215 (471)
T ss_dssp EEEEEECT------------------------------------------------------------------------
T ss_pred EEEecccC------------------------------------------------------------------------
Confidence 99998542
Q ss_pred hHHHhhcCceEEEEccCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCccccccCCCCCCC
Q 044993 372 GYEAAKKGAVAMITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRI 451 (713)
Q Consensus 372 ~~~~~~~Ga~g~i~~~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~ 451 (713)
.+.++.||++||..
T Consensus 216 -----------------------------------------------------------------~g~~a~~S~~g~~~- 229 (471)
T 1p8j_A 216 -----------------------------------------------------------------FGNVPWYSEACSST- 229 (471)
T ss_dssp -----------------------------------------------------------------TSCCCTTCCBCTTC-
T ss_pred -----------------------------------------------------------------CCCcccccCCCCcc-
Confidence 24578899999987
Q ss_pred CCCCCCCceeeCCCcEEeeecCCCCCCCCcCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccc
Q 044993 452 DPSIIKPDVIAPGVNIVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTARA 531 (713)
Q Consensus 452 ~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~ 531 (713)
....+|...+||..|+++.... ..|..++|||||||||||++|||+|++|+|++.+||++|++||++
T Consensus 230 -~~~~~~~~~~~g~~i~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~ 296 (471)
T 1p8j_A 230 -LATTYSSGNQNEKQIVTTDLRQ------------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKP 296 (471)
T ss_dssp -CEEEECCCSTTSCCEEEEETTT------------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBC
T ss_pred -eEEeCCCCCCCCCCEEEeeCCC------------CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCcc
Confidence 4556667677778999997642 268999999999999999999999999999999999999999998
Q ss_pred cCCCCCccccCCCCCCCCCccCccccCccCcCCCCe
Q 044993 532 TDANNKPISEFNGKEATAFAYGSGHVDPNSALDPGL 567 (713)
Q Consensus 532 ~~~~g~~~~~~~~~~~~~~~~G~G~id~~~A~~~~l 567 (713)
+......+.........+..||||+||+.+|++...
T Consensus 297 ~~~~~~~~~~n~~g~~~~~~~G~G~vda~~Av~~a~ 332 (471)
T 1p8j_A 297 AHLNADDWATNGVGRKVSHSYGYGLLDAGAMVALAQ 332 (471)
T ss_dssp TTCCCSCCEECTTSCEEBTTTBTCBCCHHHHHHHHH
T ss_pred CCCCCCCceecCCCcccCCCCCCEEEcHhHHHHHhh
Confidence 764322222111122346799999999999998543
No 30
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=1.2e-46 Score=392.08 Aligned_cols=240 Identities=26% Similarity=0.338 Sum_probs=200.8
Q ss_pred ccccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecccchhhhhcCCCCCCCC
Q 044993 70 TWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRNPAFDI 149 (713)
Q Consensus 70 ~~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~ 149 (713)
.|.. .+|+||+|+|||||||++||+|.+ ++...++|.+
T Consensus 24 ~~~~-~~G~gv~VaViDsGvd~~H~~l~~--------------------------~~~~~~~~~~--------------- 61 (279)
T 2pwa_A 24 YYDE-SAGQGSCVYVIDTGIEASHPEFEG--------------------------RAQMVKTYYY--------------- 61 (279)
T ss_dssp ECCT-TTTTTEEEEEEESCCCTTCGGGTT--------------------------CEEEEEESSS---------------
T ss_pred cccC-CCCCCCEEEEEeCCCCCCChhHhC--------------------------ccccccCCCC---------------
Confidence 4543 799999999999999999999964 2334444431
Q ss_pred CCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCCCHHHHHHHHH
Q 044993 150 PPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIEAFD 229 (713)
Q Consensus 150 ~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~~~~i~~ai~ 229 (713)
.+.|..||||||||||+|+ ..||||+|+|+.+|++... +.+..++++++|+
T Consensus 62 -----~~~d~~gHGT~vAgiia~~---------------~~GvAp~a~i~~~~v~~~~---------g~~~~~~~~~ai~ 112 (279)
T 2pwa_A 62 -----SSRDGNGHGTHCAGTVGSR---------------TYGVAKKTQLFGVKVLDDN---------GSGQYSTIIAGMD 112 (279)
T ss_dssp -----CSSCSSSHHHHHHHHHHCT---------------TTCSSTTCEEEEEECSCTT---------SCCCHHHHHHHHH
T ss_pred -----CCCCCCCCHHHHHHHHHhc---------------ccccCCCCEEEEEEeEcCC---------CCcCHHHHHHHHH
Confidence 2456789999999999986 4579999999999999876 2578899999999
Q ss_pred HHHHcCC-------CeeEeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCCC-CccCCCCccEEeccccCCc
Q 044993 230 DAIHDGV-------DIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQ-TINNMAPWMLTVGASTMDR 301 (713)
Q Consensus 230 ~a~~~gv-------dVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~-~~~~~ap~vitVgA~~~~~ 301 (713)
+++++++ +|||||||.. ....+..++.++.++|++||+||||+|.... ..+...+++|+|||++.
T Consensus 113 ~a~~~~~~~~~~~~~Vin~S~G~~-----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~-- 185 (279)
T 2pwa_A 113 FVASDKNNRNCPKGVVASLSLGGG-----YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDR-- 185 (279)
T ss_dssp HHHHHGGGSCCTTEEEEEECCCEE-----CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECT--
T ss_pred HHHhcCccccCCCccEEEecCCCC-----CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecC--
Confidence 9999988 9999999976 2467888999999999999999999996532 23455789999998542
Q ss_pred eeEEEEEeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccccCeEEEEEechhhHHHhhcCce
Q 044993 302 EFAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKGYEAAKKGAV 381 (713)
Q Consensus 302 ~~~~~~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~k~~~~~~~Ga~ 381 (713)
T Consensus 186 -------------------------------------------------------------------------------- 185 (279)
T 2pwa_A 186 -------------------------------------------------------------------------------- 185 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEccCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCccccccCCCCCCCCCCCCCCcee
Q 044993 382 AMITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVI 461 (713)
Q Consensus 382 g~i~~~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~KPDI~ 461 (713)
.+.++.||++||.. ||+
T Consensus 186 -------------------------------------------------------~~~~~~~S~~G~~~--------di~ 202 (279)
T 2pwa_A 186 -------------------------------------------------------YDRRSSFSNYGSVL--------DIF 202 (279)
T ss_dssp -------------------------------------------------------TSBBCTTCCBSTTC--------CEE
T ss_pred -------------------------------------------------------CCCcCCcCCCCCcc--------eEE
Confidence 25678999999965 999
Q ss_pred eCCCcEEeeecCCCCCCCCcCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCcccc
Q 044993 462 APGVNIVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTARATDANNKPISE 541 (713)
Q Consensus 462 APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~g~~~~~ 541 (713)
|||++|+++++.. .|..++|||||||||||++|||+|+ |++++.+||++|++||++..
T Consensus 203 APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~~-------- 260 (279)
T 2pwa_A 203 GPGTDILSTWIGG-------------STRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKGD-------- 260 (279)
T ss_dssp EECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEESC--------
T ss_pred EecCCeEEeecCC-------------CEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCcccc--------
Confidence 9999999999864 7999999999999999999999999 99999999999999998752
Q ss_pred CCCCCCCCCccCccccCc
Q 044993 542 FNGKEATAFAYGSGHVDP 559 (713)
Q Consensus 542 ~~~~~~~~~~~G~G~id~ 559 (713)
...+|+|..|+
T Consensus 261 -------~~~~~~g~~n~ 271 (279)
T 2pwa_A 261 -------LSNIPFGTVNL 271 (279)
T ss_dssp -------CBSCCTTSCCE
T ss_pred -------cCCCCCCCccE
Confidence 22467787776
No 31
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=9.6e-46 Score=416.53 Aligned_cols=287 Identities=20% Similarity=0.248 Sum_probs=216.7
Q ss_pred CCCccccccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecccchhhhhcCCC
Q 044993 65 IPSNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRN 144 (713)
Q Consensus 65 ~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~~~~~~~~~~~ 144 (713)
+.+..+|..+++|+||+|||||||||++||+|.+.- ...+.++|.++.
T Consensus 41 i~~~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~------------------------~~~~~~d~~~~~-------- 88 (503)
T 2id4_A 41 INVLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNF------------------------CAEGSWDFNDNT-------- 88 (503)
T ss_dssp CCCHHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTB------------------------CGGGCEETTTTB--------
T ss_pred cChHHHHhcCCCCCCeEEEEEeCCCCCCChhHhhcc------------------------cccCcccCCCCC--------
Confidence 456799999999999999999999999999996520 111234444321
Q ss_pred CCCCCCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCCCHHHH
Q 044993 145 PAFDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDT 224 (713)
Q Consensus 145 ~~~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~~~~i 224 (713)
.+.....|..||||||||||+|... +..| +.||||+|+|+.+|++.. .....++
T Consensus 89 ------~~~~p~~d~~gHGT~vAGiiaa~~~---n~~~------~~GvAp~a~i~~~rv~~~-----------~~~~~~~ 142 (503)
T 2id4_A 89 ------NLPKPRLSDDYHGTRCAGEIAAKKG---NNFC------GVGVGYNAKISGIRILSG-----------DITTEDE 142 (503)
T ss_dssp ------SCCCCCSTTTTHHHHHHHHHHCCSS---SSSS------CCCTTTTSEEEEEECTTS-----------CCCHHHH
T ss_pred ------CCCCCCCCCCChHHHHHHHHHhccC---CCCC------cEEECCCCEEEEEEeeCC-----------CCChHHH
Confidence 0011234678999999999999742 2333 678999999999999863 3678899
Q ss_pred HHHHHHHHHcCCCeeEeecCCCCCCCC---CcchHHHHHHHHh-----cCCcEEEEecCCCCCCCCCc--c--CCCCccE
Q 044993 225 IEAFDDAIHDGVDIITVSLGYDNIADF---LSDGVVIGAFHAT-----MNGVLTVAASGNGGPEPQTI--N--NMAPWML 292 (713)
Q Consensus 225 ~~ai~~a~~~gvdVIn~SlG~~~~~~~---~~~~~~~a~~~a~-----~~Gv~vV~AAGN~G~~~~~~--~--~~ap~vi 292 (713)
++||++|++.+ +|||||||....... ....+..++.++. .+|++||+||||+|...... . ..++++|
T Consensus 143 ~~ai~~a~~~~-~Iin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI 221 (503)
T 2id4_A 143 AASLIYGLDVN-DIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSI 221 (503)
T ss_dssp HHHTTTTTTTC-SEEEECEESCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEE
T ss_pred HHHHHhHhhcC-CEEEeCCCcCCCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEE
Confidence 99999999988 999999998732111 2234666777766 47999999999999643222 1 1357899
Q ss_pred EeccccCCceeEEEEEeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccccCeEEEEEechhh
Q 044993 293 TVGASTMDREFAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKG 372 (713)
Q Consensus 293 tVgA~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~k~ 372 (713)
+|||++.
T Consensus 222 ~VgA~~~------------------------------------------------------------------------- 228 (503)
T 2id4_A 222 TIGAIDH------------------------------------------------------------------------- 228 (503)
T ss_dssp EEEEECT-------------------------------------------------------------------------
T ss_pred EEEeeCC-------------------------------------------------------------------------
Confidence 9998542
Q ss_pred HHHhhcCceEEEEccCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCccccccCCCCCCCC
Q 044993 373 YEAAKKGAVAMITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRID 452 (713)
Q Consensus 373 ~~~~~~Ga~g~i~~~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~ 452 (713)
.+.++.||++||..
T Consensus 229 ----------------------------------------------------------------~~~~a~~S~~g~~~-- 242 (503)
T 2id4_A 229 ----------------------------------------------------------------KDLHPPYSEGCSAV-- 242 (503)
T ss_dssp ----------------------------------------------------------------TSCCCTTCCCCTTE--
T ss_pred ----------------------------------------------------------------CCCcCCcCCCCCcc--
Confidence 24578899999987
Q ss_pred CCCCCCceee----CCCcEEeeecCCCCCCCCcCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhc
Q 044993 453 PSIIKPDVIA----PGVNIVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTT 528 (713)
Q Consensus 453 ~~~~KPDI~A----PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~T 528 (713)
|++| ||..|+++.... ..|..++|||||||||||++|||+|++|+|++.+||++|+.|
T Consensus 243 ------~~~a~~~gpG~~I~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~t 304 (503)
T 2id4_A 243 ------MAVTYSSGSGEYIHSSDING------------RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILS 304 (503)
T ss_dssp ------EEEEECSBTTBCEEEECSTT------------CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHH
T ss_pred ------eEeecCCCCCCceEeecCCC------------CceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhc
Confidence 8887 899999995432 279999999999999999999999999999999999999999
Q ss_pred ccccCCC-CCccccCCCCCCCCCccCccccCccCcCCCCe
Q 044993 529 ARATDAN-NKPISEFNGKEATAFAYGSGHVDPNSALDPGL 567 (713)
Q Consensus 529 A~~~~~~-g~~~~~~~~~~~~~~~~G~G~id~~~A~~~~l 567 (713)
|+++... ...+............||||+||+.+|++...
T Consensus 305 A~~~~~~~~~~~~~~~~g~~~~~~~G~G~vda~~Av~~a~ 344 (503)
T 2id4_A 305 AVGLEKNADGDWRDSAMGKKYSHRYGFGKIDAHKLIEMSK 344 (503)
T ss_dssp CBCCTTCGGGCCEECSSSSEEBTTTBTCBCCHHHHHHHHT
T ss_pred cccCCCCcCCCceecCCCCccCcccCCcEecHHHHHHHHh
Confidence 9987543 11111111122346689999999999998533
No 32
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=2.6e-45 Score=383.07 Aligned_cols=230 Identities=25% Similarity=0.343 Sum_probs=195.1
Q ss_pred cccccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecccchhhhhcCCCCCCC
Q 044993 69 STWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRNPAFD 148 (713)
Q Consensus 69 ~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~ 148 (713)
..|... +|+||+|+|||||||++||+|.+ ++...++|.++
T Consensus 24 ~~~~~~-~G~gv~VaViDtGvd~~h~~l~~--------------------------~~~~~~~~~~~------------- 63 (279)
T 3f7m_A 24 YAYDTS-AGAGACVYVIDTGVEDTHPDFEG--------------------------RAKQIKSYAST------------- 63 (279)
T ss_dssp EEECTT-TTTTEEEEEEESCCCTTCGGGTT--------------------------CEEEEEECSSS-------------
T ss_pred eeecCC-CCCCCEEEEEcCCCCCCChhhcc--------------------------ccccccCCCCC-------------
Confidence 567766 99999999999999999999964 34444444321
Q ss_pred CCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCCCHHHHHHHH
Q 044993 149 IPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIEAF 228 (713)
Q Consensus 149 ~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~~~~i~~ai 228 (713)
..|..||||||||||+|+ ..||||+|+|+.+|++... +.+..++++++|
T Consensus 64 -------~~d~~gHGT~vAgii~~~---------------~~GvAp~a~l~~~~v~~~~---------~~~~~~~~~~ai 112 (279)
T 3f7m_A 64 -------ARDGHGHGTHCAGTIGSK---------------TWGVAKKVSIFGVKVLDDS---------GSGSLSNIIAGM 112 (279)
T ss_dssp -------SSCSSSHHHHHHHHHHCT---------------TTCSSTTCEEEEEECSCTT---------SCCCHHHHHHHH
T ss_pred -------CCCCCCcHHHHHHHHhcC---------------ccccCCCCEEEEEEeeCCC---------CCcCHHHHHHHH
Confidence 126789999999999986 4579999999999999866 367889999999
Q ss_pred HHHHHcC-------CCeeEeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCCCCc-cCCCCccEEeccccCC
Q 044993 229 DDAIHDG-------VDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTI-NNMAPWMLTVGASTMD 300 (713)
Q Consensus 229 ~~a~~~g-------vdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~-~~~ap~vitVgA~~~~ 300 (713)
+++++++ ++|||||||.. ....+..++.++.++|++||+||||+|...... ....+++|+|||++.
T Consensus 113 ~~~~~~~~~~~~~~~~Vin~S~g~~-----~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~- 186 (279)
T 3f7m_A 113 DFVASDRQSRNCPRRTVASMSLGGG-----YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDS- 186 (279)
T ss_dssp HHHHHHGGGSCCTTEEEEEECCCEE-----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT-
T ss_pred HHHHhccccccCCCCeEEEeCCCcC-----ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCC-
Confidence 9999986 89999999976 456788899999999999999999999653322 456789999998542
Q ss_pred ceeEEEEEeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccccCeEEEEEechhhHHHhhcCc
Q 044993 301 REFAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKGYEAAKKGA 380 (713)
Q Consensus 301 ~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~k~~~~~~~Ga 380 (713)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 3f7m_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEccCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCccccccCCCCCCCCCCCCCCce
Q 044993 381 VAMITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDV 460 (713)
Q Consensus 381 ~g~i~~~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~KPDI 460 (713)
.+.++.||++||.. ||
T Consensus 187 --------------------------------------------------------~~~~~~~S~~g~~~--------di 202 (279)
T 3f7m_A 187 --------------------------------------------------------NDVRSTFSNYGRVV--------DI 202 (279)
T ss_dssp --------------------------------------------------------TSBBCTTCCBSTTC--------CE
T ss_pred --------------------------------------------------------CCCCCCCCCCCCCC--------eE
Confidence 25678899999965 99
Q ss_pred eeCCCcEEeeecCCCCCCCCcCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccC
Q 044993 461 IAPGVNIVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTARATD 533 (713)
Q Consensus 461 ~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~ 533 (713)
+|||++|+++++.. .|..++|||||||+|||++|||+|++|. ++.+||++|++||.+..
T Consensus 203 ~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~~ 261 (279)
T 3f7m_A 203 FAPGTSITSTWIGG-------------RTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKNV 261 (279)
T ss_dssp EEECSSEEEECGGG-------------CEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEESC
T ss_pred EECCCCeEeecCCC-------------CEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhccccc
Confidence 99999999998863 7899999999999999999999999999 99999999999998753
No 33
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=4.2e-44 Score=413.58 Aligned_cols=299 Identities=21% Similarity=0.231 Sum_probs=204.1
Q ss_pred CCCccccccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecccchhhhhcCCC
Q 044993 65 IPSNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRN 144 (713)
Q Consensus 65 ~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~~~~~~~~~~~ 144 (713)
+++..+|..+++|+||+|||||||||++||+|.+. ...+.++|.++.
T Consensus 57 inv~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n-------------------------~~~~~~~~~~~~-------- 103 (600)
T 3hjr_A 57 LNLWWAHRTGVLGQGVNVAVVDDGLAIAHPDLADN-------------------------VRPGSKNVVTGS-------- 103 (600)
T ss_dssp CCCHHHHHHTCSCTTCEEEEESSCCCTTCTTTGGG-------------------------BCSCCBCTTTSS--------
T ss_pred cCHHHHHHcCCCCCCeEEEEEcCCCCCCChhHhhc-------------------------cccCcceeecCC--------
Confidence 45779999999999999999999999999999642 011223333221
Q ss_pred CCCCCCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCCCHHHH
Q 044993 145 PAFDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDT 224 (713)
Q Consensus 145 ~~~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~~~~i 224 (713)
.+.....|..+|||||||||||. .+..| +.||||+|+|+.+|+++.. +.+..+++
T Consensus 104 ------~dp~p~~~~~gHGThVAGiIAa~----~n~~g------~~GVAp~A~l~~~rvl~~~---------~~~~~~~~ 158 (600)
T 3hjr_A 104 ------DDPTPTDPDTAHGTSVSGIIAAV----DNAIG------TKGIAPRAQLQGFNLLDDN---------SQQLQKDW 158 (600)
T ss_dssp ------SCCCCCSTTCCHHHHHHHHHHCC----SSSSS------CCCSSTTCEEEEECTTSTT---------CCCCHHHH
T ss_pred ------CCCCCCCCCCChHHHHHHHHhEe----CCCCC------cEEeCCCCEEEEEEeecCC---------CCccHHHH
Confidence 01122335789999999999986 34445 7899999999999999876 35667777
Q ss_pred HHHH-HHHHHcCCCeeEeecCCCCCCCCCcch-----HHHHHHHH--hcCCcEEEEecCCCCCCCCCc------------
Q 044993 225 IEAF-DDAIHDGVDIITVSLGYDNIADFLSDG-----VVIGAFHA--TMNGVLTVAASGNGGPEPQTI------------ 284 (713)
Q Consensus 225 ~~ai-~~a~~~gvdVIn~SlG~~~~~~~~~~~-----~~~a~~~a--~~~Gv~vV~AAGN~G~~~~~~------------ 284 (713)
+.++ +++..++++|||||||.........+. +..++..+ ..+|+++|+||||.+......
T Consensus 159 ~~a~~~~~~~~~~~I~n~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~~~~~~~g~~~~ 238 (600)
T 3hjr_A 159 LYALGDSNASRDNRVFNQSYGMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPK 238 (600)
T ss_dssp HHHTTSSHHHHTCSEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESSCCC
T ss_pred HHHhhhhhhhcCCCEEecccCccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccccccccCCCCCC
Confidence 7765 678889999999999976322222222 22222222 268999999999976321000
Q ss_pred ----------cCCCCccEEeccccCCceeEEEEEeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCC
Q 044993 285 ----------NNMAPWMLTVGASTMDREFAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTL 354 (713)
Q Consensus 285 ----------~~~ap~vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~ 354 (713)
....+++|+|||
T Consensus 239 ~~~~~~~~d~~~~~~~~IsVgA---------------------------------------------------------- 260 (600)
T 3hjr_A 239 LPFENSNLDPSNSNFWNLVVSA---------------------------------------------------------- 260 (600)
T ss_dssp CCSSBTTSSGGGGSSSEEEEEE----------------------------------------------------------
T ss_pred CCcccccccCccccCcceEEee----------------------------------------------------------
Confidence 001122222222
Q ss_pred CcccccCeEEEEEechhhHHHhhcCceEEEEccCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccc
Q 044993 355 DRKKVQGRILVCLHEEKGYEAAKKGAVAMITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAI 434 (713)
Q Consensus 355 ~~~~~~gkivl~~~~~k~~~~~~~Ga~g~i~~~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~ 434 (713)
.
T Consensus 261 -------------------------------------------------------------------------------~ 261 (600)
T 3hjr_A 261 -------------------------------------------------------------------------------L 261 (600)
T ss_dssp -------------------------------------------------------------------------------E
T ss_pred -------------------------------------------------------------------------------e
Confidence 1
Q ss_pred cCCCccccccCCCCCCCCCCCCCCceeeCCCcE-------Ee-eecCCCCCC-------------CCcCCCCccceeeec
Q 044993 435 EPSPAVASFSSRGPNRIDPSIIKPDVIAPGVNI-------VA-AYTSERGPT-------------GYARDNRRFAFTAMD 493 (713)
Q Consensus 435 ~~~~~~a~fSS~GPt~~~~~~~KPDI~APG~~I-------~s-a~~~~~~~~-------------~~~~~~~~~~y~~~s 493 (713)
...+.++.||++|+.. +++|||..+ +. ..++..... ..........|..++
T Consensus 262 ~~~g~~a~yS~~G~~v--------~~~apg~~~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 333 (600)
T 3hjr_A 262 NADGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMN 333 (600)
T ss_dssp CTTSSBCTTCCBCTTC--------CEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEEC
T ss_pred cCCCCEeecccCCcce--------eeccCCCCCCCCCcceeeecCCCccccccccCCccccccccccccCCCCCceeccc
Confidence 2246788999999987 899998752 22 222110000 001112235688999
Q ss_pred cccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCccc--------------------cCCCCCCCCCccC
Q 044993 494 GTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTARATDANNKPIS--------------------EFNGKEATAFAYG 553 (713)
Q Consensus 494 GTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~g~~~~--------------------~~~~~~~~~~~~G 553 (713)
|||||||||||++|||+|++|+|+++|||++|++||++++....|+. ...........||
T Consensus 334 GTSmAaP~VAGvaALll~a~P~lt~~~v~~~L~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~~s~~yG 413 (600)
T 3hjr_A 334 GTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYG 413 (600)
T ss_dssp SHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTB
T ss_pred cccccchhHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCCCcccccccccccccccccccCCcccccCCceEccccC
Confidence 99999999999999999999999999999999999999886655422 1111222356899
Q ss_pred ccccCccCcCCCC
Q 044993 554 SGHVDPNSALDPG 566 (713)
Q Consensus 554 ~G~id~~~A~~~~ 566 (713)
+|+||+.+|++..
T Consensus 414 fG~vDA~~aV~~A 426 (600)
T 3hjr_A 414 FGLIDVNKALELA 426 (600)
T ss_dssp TCBCCHHHHHHHH
T ss_pred CceecHHHHHHHh
Confidence 9999999998743
No 34
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=1.4e-44 Score=400.33 Aligned_cols=248 Identities=19% Similarity=0.208 Sum_probs=186.9
Q ss_pred cccccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeecccchhhhhcCCCCCCC
Q 044993 69 STWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRNPAFD 148 (713)
Q Consensus 69 ~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~ 148 (713)
..|..+++|+||+|+|||||||++||+|.+. .....+.+..+.+ +
T Consensus 17 ~aw~~~~tG~GV~VaVIDTGId~~HpdL~gr-------------------------~~~~~~~~v~~~d-----g----- 61 (546)
T 2qtw_B 17 DEYQPPDGGSLVEVYLLDTSIQSDHREIEGR-------------------------VMVTDFENVPEED-----G----- 61 (546)
T ss_dssp -------CCTTSEEEEEESCCCTTSTTTTTT-------------------------EEEEEEECCCCCC-----------
T ss_pred hhcccCCCCCCcEEEEECCCCCCCChHHccc-------------------------ccccCcccccCCC-----C-----
Confidence 4788899999999999999999999999642 0111111111000 0
Q ss_pred CCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCCCCCCCCHHHHHHHH
Q 044993 149 IPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIEAF 228 (713)
Q Consensus 149 ~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~~~~i~~ai 228 (713)
..-...+.|..||||||||||+|+ ..||||+|+|+.+|++... +....+++++||
T Consensus 62 -~~f~~~~~D~~GHGThVAGIIag~---------------~~GVAP~A~L~~vkVl~~~---------G~g~~s~ii~ai 116 (546)
T 2qtw_B 62 -TRFHRQASKCDSHGTHLAGVVSGR---------------DAGVAKGASMRSLRVLNCQ---------GKGTVSGTLIGL 116 (546)
T ss_dssp -------CTTTTHHHHHHHHHHHCT---------------TTCSSTTCEEEEEECSCTT---------SEEEHHHHHHHH
T ss_pred -ccccCCCCCCCChHHHHHHHHhcc---------------CCCcCCCCEEEEEEEECCC---------CCcCHHHHHHHH
Confidence 000124567899999999999986 2469999999999999865 256788999999
Q ss_pred HHHHHc------CCCeeEeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCCC-CccCCCCccEEeccccCCc
Q 044993 229 DDAIHD------GVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQ-TINNMAPWMLTVGASTMDR 301 (713)
Q Consensus 229 ~~a~~~------gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~-~~~~~ap~vitVgA~~~~~ 301 (713)
+|+++. +++|||||||+. ....+..++.++.++|++||+||||+|.... ..+...+++|+|||++.+.
T Consensus 117 ~~a~~~~~~~~~g~~VINmSlGg~-----~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g 191 (546)
T 2qtw_B 117 EFIRKSQLVQPVGPLVVLLPLAGG-----YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQD 191 (546)
T ss_dssp HHHHHHHHHSCCSCEEEEECEEEE-----CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTS
T ss_pred HHHHHhhhhccCCCeEEEecCCCC-----CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCC
Confidence 999984 899999999976 2467888999999999999999999996432 2344579999999865432
Q ss_pred eeEEEEEeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccccCeEEEEEechhhHHHhhcCce
Q 044993 302 EFAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKGYEAAKKGAV 381 (713)
Q Consensus 302 ~~~~~~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~k~~~~~~~Ga~ 381 (713)
..
T Consensus 192 ~~------------------------------------------------------------------------------ 193 (546)
T 2qtw_B 192 QP------------------------------------------------------------------------------ 193 (546)
T ss_dssp CB------------------------------------------------------------------------------
T ss_pred Cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred EEEEccCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCccccccCCCCCCCCCCCCCCcee
Q 044993 382 AMITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVI 461 (713)
Q Consensus 382 g~i~~~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~KPDI~ 461 (713)
...-..||++||. |||+
T Consensus 194 -------------------------------------------------------a~~s~~fSn~G~~--------vDI~ 210 (546)
T 2qtw_B 194 -------------------------------------------------------VTLGTLGTNFGRC--------VDLF 210 (546)
T ss_dssp -------------------------------------------------------CEETTEECCBSTT--------CCEE
T ss_pred -------------------------------------------------------ccccCCcCCCCCc--------ceEE
Confidence 0001128999974 5999
Q ss_pred eCCCcEEeeecCCCCCCCCcCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccC
Q 044993 462 APGVNIVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTARATD 533 (713)
Q Consensus 462 APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~ 533 (713)
|||++|+++++... ..|..++|||||||||||++|||+|++|+|+|.|||++|++||.+..
T Consensus 211 APG~~I~St~~~~~-----------~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~~ 271 (546)
T 2qtw_B 211 APGEDIIGASSDCS-----------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDV 271 (546)
T ss_dssp EECSSEEEECTTST-----------TCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEESC
T ss_pred ecCccEEeeccCCC-----------CcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccc
Confidence 99999999987632 27999999999999999999999999999999999999999998753
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.90 E-value=5.3e-25 Score=248.30 Aligned_cols=97 Identities=22% Similarity=0.361 Sum_probs=75.3
Q ss_pred eeeeecCCCcEEEeeeecCCCCccCCCCCCCCCHHHHHHHHHHHHH---cCCCeeEeecCCCCCCCCC---cchHHHHHH
Q 044993 188 TAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIEAFDDAIH---DGVDIITVSLGYDNIADFL---SDGVVIGAF 261 (713)
Q Consensus 188 ~~~GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~~~~i~~ai~~a~~---~gvdVIn~SlG~~~~~~~~---~~~~~~a~~ 261 (713)
.+.||||+|+|+.|++. ...++++++|++|++ ++++|||||||... ..+. ...+..++.
T Consensus 273 ~~~gvAp~a~i~~~~~~--------------~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e-~~~~~~~~~~~~~~~~ 337 (552)
T 1t1e_A 273 VAGALAPGAKIAVYFAP--------------NTDAGFLNAITTAVHDPTHKPSIVSISWGGPE-DSWAPASIAAMNRAFL 337 (552)
T ss_dssp HHHHHCTTSEEEEEECC--------------SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEG-GGSCHHHHHHHHHHHH
T ss_pred hhhccCCCCeEEEEEcC--------------CCCchHHHHHHHHHhcccCCCCEEEecccCCc-ccCCHHHHHHHHHHHH
Confidence 36789999999999972 235679999999998 79999999999872 1111 234566777
Q ss_pred HHhcCCcEEEEecCCCCCCCC--------CccCCCCccEEeccccC
Q 044993 262 HATMNGVLTVAASGNGGPEPQ--------TINNMAPWMLTVGASTM 299 (713)
Q Consensus 262 ~a~~~Gv~vV~AAGN~G~~~~--------~~~~~ap~vitVgA~~~ 299 (713)
+|..+||+||+||||+|.... ......|||++||+++.
T Consensus 338 ~a~~~Gi~vv~AsGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~ 383 (552)
T 1t1e_A 338 DAAALGVTVLAAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRL 383 (552)
T ss_dssp HHHHTTCEEEEECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEE
T ss_pred HHHhCCeEEEEecCCCCCCCCCCCCcccccCcccCCCEEEEecccc
Confidence 788999999999999996431 22345699999999764
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.85 E-value=1.8e-21 Score=209.27 Aligned_cols=100 Identities=19% Similarity=0.175 Sum_probs=76.9
Q ss_pred eecCCCcEEEeeeecCCCCccCCCCCCCCCHHHHHHHHHHHHH-cCCCeeEeecCCCCCC---CCCcchHHHHHHHHhcC
Q 044993 191 GGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIEAFDDAIH-DGVDIITVSLGYDNIA---DFLSDGVVIGAFHATMN 266 (713)
Q Consensus 191 GvAP~A~l~~~kv~~~~~~~~~~~~gg~~~~~~i~~ai~~a~~-~gvdVIn~SlG~~~~~---~~~~~~~~~a~~~a~~~ 266 (713)
.+||+++++.|++.... .+..++++++|++|++ ++++|||||||..... ......+..++.+|..+
T Consensus 91 ~~aP~a~~~~~~~~~~~----------~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~ 160 (372)
T 1ga6_A 91 SAGGAVQQLLFYMADQS----------ASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQ 160 (372)
T ss_dssp HTTSCEEEEEEEEECTT----------SSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHT
T ss_pred hcCCCCcEEEEEeCCCC----------CcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhC
Confidence 47999999999997643 3677889999999998 8999999999987210 11123566677778889
Q ss_pred CcEEEEecCCCCCCCC-------------CccCCCCccEEeccccCC
Q 044993 267 GVLTVAASGNGGPEPQ-------------TINNMAPWMLTVGASTMD 300 (713)
Q Consensus 267 Gv~vV~AAGN~G~~~~-------------~~~~~ap~vitVgA~~~~ 300 (713)
||+||+||||+|.... ......|||++||+++..
T Consensus 161 Gitvv~AsGd~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~~ 207 (372)
T 1ga6_A 161 GQTFSVSSGDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLY 207 (372)
T ss_dssp TCEEEEECCSBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEE
T ss_pred CcEEEEEECCCCCccccccCccCCccCCcCCCCCCCCeEEEEeeecc
Confidence 9999999999996531 222356999999997643
No 37
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=98.88 E-value=3.3e-09 Score=118.81 Aligned_cols=76 Identities=22% Similarity=0.251 Sum_probs=51.4
Q ss_pred HHHHHHHHHH--HcCCCeeEeecCCCCCCCC---CcchHHHHHHHHhcCCcEEEEecCCCCCCCC----------CccCC
Q 044993 223 DTIEAFDDAI--HDGVDIITVSLGYDNIADF---LSDGVVIGAFHATMNGVLTVAASGNGGPEPQ----------TINNM 287 (713)
Q Consensus 223 ~i~~ai~~a~--~~gvdVIn~SlG~~~~~~~---~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~----------~~~~~ 287 (713)
.++..+++.. .+-++|||||||... ... +...+...+.++..+||.|++|+||+|.... .....
T Consensus 284 ~~l~~l~~l~~~~~~~~ViS~S~G~~e-~~~~~~y~~~~~~~~~~~~~~Gitv~~ASGD~G~~~~~~~~~~~~~~~~Pas 362 (544)
T 3edy_A 284 PFLQWLMLLSNESALPHVHTVSYGDDE-DSLSSAYIQRVNTELMKAAARGLTLLFASGDSGAGCWSVSGRHQFRPTFPAS 362 (544)
T ss_dssp HHHHHHHHHTTCSSCCSEEEEECCEEG-GGSCHHHHHHHHHHHHHHHHTTCEEEEECCSSTTBCEEETTEEECCCEETTT
T ss_pred cHHHHHHHHhccCCCCcEEEecCCCcc-cccCHHHHHHHHHHHHHHHhCCeEEEEecCCCCccccCCCCCccccCCCcCC
Confidence 3444444333 255789999999982 111 1223455666778999999999999996421 23345
Q ss_pred CCccEEeccccC
Q 044993 288 APWMLTVGASTM 299 (713)
Q Consensus 288 ap~vitVgA~~~ 299 (713)
.|||++||+++.
T Consensus 363 ~P~VtaVGgT~l 374 (544)
T 3edy_A 363 SPYVTTVGGTSF 374 (544)
T ss_dssp CTTSEEEEEEEE
T ss_pred CCcEEEEeeeec
Confidence 799999999764
No 38
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.18 E-value=1.6e-06 Score=71.46 Aligned_cols=48 Identities=19% Similarity=0.305 Sum_probs=43.6
Q ss_pred cccceeEEecceeeeEEEEcCHHHHHHhhCCCCeEEEEeccccccCCCC
Q 044993 4 ARELISSSYRRHINGFAADLEEEHAQQLANHPEVVSVFLNKPTKKLTTG 52 (713)
Q Consensus 4 ~~~~i~~~y~~~~ng~s~~~~~~~~~~L~~~~~V~~V~~~~~~~~~~~~ 52 (713)
...+|.|+|++ |+||+++++++++++|+++|+|.+|++++.++++++.
T Consensus 32 ~g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~~v~~~tt~ 79 (80)
T 3cnq_P 32 KGGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEEDKLYRALSAT 79 (80)
T ss_dssp TTCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEECCEEEECCC-
T ss_pred cCCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeCcEEEEeeec
Confidence 45689999998 9999999999999999999999999999999887653
No 39
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=97.94 E-value=5.2e-06 Score=73.16 Aligned_cols=45 Identities=11% Similarity=0.093 Sum_probs=41.7
Q ss_pred cccceeEEecceeeeEEEEcCHHHHHHhhCCCCeEEEEecccccc
Q 044993 4 ARELISSSYRRHINGFAADLEEEHAQQLANHPEVVSVFLNKPTKK 48 (713)
Q Consensus 4 ~~~~i~~~y~~~~ng~s~~~~~~~~~~L~~~~~V~~V~~~~~~~~ 48 (713)
+..+|+|+|++.|+||+++|+++++++|+++|+|.+|++++.++.
T Consensus 69 ~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~~v~~ 113 (114)
T 2w2n_P 69 YLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 113 (114)
T ss_dssp CCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred cCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCceEec
Confidence 456899999999999999999999999999999999999987754
No 40
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=97.64 E-value=0.00023 Score=68.21 Aligned_cols=85 Identities=12% Similarity=0.039 Sum_probs=66.4
Q ss_pred CCCCCCCCCCCccc-------ccCeEEEEEe------chhhHHHhhcCceEEEE-cc--CC-c---cc-ccCCcccEEEe
Q 044993 345 KDASCKPGTLDRKK-------VQGRILVCLH------EEKGYEAAKKGAVAMIT-GA--SG-T---FS-ASYGFLPVTKL 403 (713)
Q Consensus 345 ~~~~c~~~~~~~~~-------~~gkivl~~~------~~k~~~~~~~Ga~g~i~-~~--~g-~---~~-~~~~~~p~~~i 403 (713)
....|.+..+.... .+|||+|++| .+|..+++++||.++|| +. .+ . +. .....+|+++|
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~I 161 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMI 161 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEE
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEE
Confidence 46789887653322 4789999999 37999999999999999 43 22 2 22 12357999999
Q ss_pred ehhhHHHHHHHHhcCCCcEEEEeecc
Q 044993 404 KIKDFEAVLDYIKSTKDAKAFMTDAQ 429 (713)
Q Consensus 404 ~~~~g~~l~~~~~~~~~~~~~i~~~~ 429 (713)
+..+|+.|+++++++...+++|....
T Consensus 162 s~~~G~~L~~~L~~G~~Vtvti~vg~ 187 (194)
T 3icu_A 162 GNLKGTKILQSIQRGIQVTMVIEVGK 187 (194)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEEEECCC
Confidence 99999999999999998888887653
No 41
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=97.61 E-value=3.7e-05 Score=68.58 Aligned_cols=44 Identities=11% Similarity=0.111 Sum_probs=40.7
Q ss_pred ccceeEEecceeeeEEEEcCHHHHHHhhCCCCeEEEEecccccc
Q 044993 5 RELISSSYRRHINGFAADLEEEHAQQLANHPEVVSVFLNKPTKK 48 (713)
Q Consensus 5 ~~~i~~~y~~~~ng~s~~~~~~~~~~L~~~~~V~~V~~~~~~~~ 48 (713)
..+|.|+|++.||||+++++++++++|+++|+|.+|++++.++.
T Consensus 80 g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~~v~a 123 (124)
T 2qtw_A 80 LTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 123 (124)
T ss_dssp CCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred CCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCceEec
Confidence 35899999999999999999999999999999999999987754
No 42
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=97.28 E-value=0.00023 Score=57.68 Aligned_cols=44 Identities=16% Similarity=0.247 Sum_probs=39.4
Q ss_pred ccceeEEe-cceeeeEEEEcCHHHHHHhhCC--CCeEEEEecccccc
Q 044993 5 RELISSSY-RRHINGFAADLEEEHAQQLANH--PEVVSVFLNKPTKK 48 (713)
Q Consensus 5 ~~~i~~~y-~~~~ng~s~~~~~~~~~~L~~~--~~V~~V~~~~~~~~ 48 (713)
..+|.|.| ...|+||+++++++.+++|+++ |.|.+||+++.++.
T Consensus 29 gg~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D~~v~~ 75 (76)
T 1v5i_B 29 GGTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEEDHVAHA 75 (76)
T ss_dssp TCCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEECCEEEC
T ss_pred CCceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCCcEEeC
Confidence 34799999 4799999999999999999999 88999999987653
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=96.67 E-value=0.0016 Score=50.84 Aligned_cols=44 Identities=16% Similarity=0.206 Sum_probs=40.0
Q ss_pred ccccceeEEecceeeeEEEEcCHHHHHHhhCCCCeEEEEeccccc
Q 044993 3 EARELISSSYRRHINGFAADLEEEHAQQLANHPEVVSVFLNKPTK 47 (713)
Q Consensus 3 ~~~~~i~~~y~~~~ng~s~~~~~~~~~~L~~~~~V~~V~~~~~~~ 47 (713)
..+.+|.|+|. .+++++++|+++.++.|+++|+|.+|+++...+
T Consensus 20 ~~gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~ 63 (65)
T 2z30_B 20 GIGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAV 63 (65)
T ss_dssp GGTCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEEE
T ss_pred HCCCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEEE
Confidence 45789999998 899999999999999999999999999997654
No 44
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.88 E-value=0.077 Score=46.80 Aligned_cols=72 Identities=19% Similarity=0.243 Sum_probs=54.1
Q ss_pred ceEEEEEEEEecCC-CceEEEEEeCCCceeEEEecCeEEEecCCcEEEEEEEEEeccCCCCCCCCCeEEEEEEEE-cCCc
Q 044993 623 GSVTVTRKLKNVGT-PGTYKAQVKEIPGISTDVEPSSLTFTHVNEEKTFKITFTLAQNAKPNATNDYVFGELIWS-DGTH 700 (713)
Q Consensus 623 ~~~t~~~tvtn~~~-~~ty~~~~~~~~g~~v~~~p~~l~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~~G~l~~~-~~~~ 700 (713)
.+.+.++.|+|.|. +..|++....| ++++|+..++ ++|++..++|+|.... ...+.+.|... +++.
T Consensus 41 ~~~~~~~~l~N~g~~~~~f~~~~~~~----F~i~P~~g~L-~pg~~~~i~V~F~P~~-------~g~~~~~l~v~~~~g~ 108 (122)
T 2ys4_A 41 YSTQKILLVRNIGNKNAVFHIKTCRP----FSIEPAIGTL-NVGESMQLEVEFEPQS-------VGDHSGRLIVCYDTGE 108 (122)
T ss_dssp SCEEEEEEEECCSSSCEEEEEECCTT----EEEESSEEEE-CTTCEEEEEEEECCSS-------SBCCCCBCEEEESSSC
T ss_pred CeEEEEEEEEECCCCCEEEEEecCCC----eEEECCcCEE-CCCCEEEEEEEEEcCC-------CccEEEEEEEEECCCC
Confidence 57888899999999 88898776543 7778999999 7899999999998865 23446655554 5555
Q ss_pred EEEeeE
Q 044993 701 RVRSPI 706 (713)
Q Consensus 701 ~v~~P~ 706 (713)
.+.+++
T Consensus 109 ~~~v~L 114 (122)
T 2ys4_A 109 KVFVSL 114 (122)
T ss_dssp EECCEE
T ss_pred EEEEEE
Confidence 555544
No 45
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=92.66 E-value=0.31 Score=52.77 Aligned_cols=63 Identities=22% Similarity=0.357 Sum_probs=49.9
Q ss_pred CCcccccCeEEEEEe-----chhhHHHhhcCceEEEEc--cCCc----ccc-cCCcccEEEeehhhHHHHHHHHh
Q 044993 354 LDRKKVQGRILVCLH-----EEKGYEAAKKGAVAMITG--ASGT----FSA-SYGFLPVTKLKIKDFEAVLDYIK 416 (713)
Q Consensus 354 ~~~~~~~gkivl~~~-----~~k~~~~~~~Ga~g~i~~--~~g~----~~~-~~~~~p~~~i~~~~g~~l~~~~~ 416 (713)
+...+++|||||+.+ ..|..+++++||.|+|+. .++. +.. ....+|...++.++++.|++++.
T Consensus 108 ~~~~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 108 VAGKDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp TTTSCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred cCCCCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 444589999999997 579999999999999992 2332 111 34679999999999999999984
No 46
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=90.34 E-value=0.59 Score=50.91 Aligned_cols=73 Identities=18% Similarity=0.231 Sum_probs=53.3
Q ss_pred cccccCeEEEEEec--------------hh----hHHHhhcCceEEEEccCC----cc--------cccCCcccEEEeeh
Q 044993 356 RKKVQGRILVCLHE--------------EK----GYEAAKKGAVAMITGASG----TF--------SASYGFLPVTKLKI 405 (713)
Q Consensus 356 ~~~~~gkivl~~~~--------------~k----~~~~~~~Ga~g~i~~~~g----~~--------~~~~~~~p~~~i~~ 405 (713)
..+++|||||+.+. .| ..++.++||.|+|+.+++ .. ......+|++.|+.
T Consensus 124 ~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~~~~~~IP~~~Is~ 203 (444)
T 3iib_A 124 AGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHTGMMRYEEGVTAIPAAAISN 203 (444)
T ss_dssp TTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCCCBCCCCTTSCCCCEEEECH
T ss_pred ccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccCCccccCCCCCCCCeEEecH
Confidence 45899999999871 12 346899999999993221 11 11235799999999
Q ss_pred hhHHHHHHHHhcCCCcEEEEeec
Q 044993 406 KDFEAVLDYIKSTKDAKAFMTDA 428 (713)
Q Consensus 406 ~~g~~l~~~~~~~~~~~~~i~~~ 428 (713)
++++.|++.++.+...++++...
T Consensus 204 ~da~~L~~~l~~g~~~~v~l~~~ 226 (444)
T 3iib_A 204 PDADLINAMLKRDKEVVISLELG 226 (444)
T ss_dssp HHHHHHHHHHTTTCCCEEEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEEEEe
Confidence 99999999998877666665543
No 47
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=89.84 E-value=3.2 Score=37.30 Aligned_cols=88 Identities=15% Similarity=0.047 Sum_probs=61.4
Q ss_pred ceEEEEEEEEecCC-CceEEEEEeCC----CceeEEEecCeEEEecCCcEEEEEEEEEeccCC--CCCCCCCeEEEEEEE
Q 044993 623 GSVTVTRKLKNVGT-PGTYKAQVKEI----PGISTDVEPSSLTFTHVNEEKTFKITFTLAQNA--KPNATNDYVFGELIW 695 (713)
Q Consensus 623 ~~~t~~~tvtn~~~-~~ty~~~~~~~----~g~~v~~~p~~l~~~~~g~~~~~~v~~~~~~~~--~~~~~~~~~~G~l~~ 695 (713)
...+-+++|+|.|. +.+|++..... ..--++++|..-++ .+|++.+++|++.+.... +......-++--|++
T Consensus 43 ~~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L-~Pge~~~I~v~~~v~~~~~~~ln~g~~~l~diLvL 121 (140)
T 3qbt_B 43 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILVL 121 (140)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCHHHHHHHHHSSSCSCEEEEE
T ss_pred eeeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCccccc-CCCCeeEEEEEEEEccCcccccccchhhhheeEEE
Confidence 45677889999999 99999985421 12347788999999 789999999999874410 000111234556666
Q ss_pred E-cCCcEEEeeEEEEee
Q 044993 696 S-DGTHRVRSPIALKQK 711 (713)
Q Consensus 696 ~-~~~~~v~~P~~~~~~ 711 (713)
. .+++...+|+...+.
T Consensus 122 ~Ve~G~d~fI~v~g~~~ 138 (140)
T 3qbt_B 122 HLDRGKDYFLTISGNYL 138 (140)
T ss_dssp EETTSCEEEEEEEEEEC
T ss_pred EeecCCcEEEEEecccc
Confidence 4 778889999887653
No 48
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=88.24 E-value=0.2 Score=60.83 Aligned_cols=24 Identities=33% Similarity=0.476 Sum_probs=22.5
Q ss_pred CCCCCccEEEEeccccCCCCCCCC
Q 044993 74 ARFGEDVIIGGIDSGICPESESFS 97 (713)
Q Consensus 74 ~~~G~Gv~VgVIDtGid~~Hp~f~ 97 (713)
.+.|+||+|||+|||||+.+|.|.
T Consensus 32 ~ydGrgv~iai~DtGVDP~a~glq 55 (1354)
T 3lxu_X 32 EYDGRDVTIAIFDSGVDPRATGLE 55 (1354)
T ss_dssp TCSSTTCEEEEEESCCCTTSTTSS
T ss_pred CCCCCccEEEEEeCCCCCCCCcce
Confidence 579999999999999999999995
No 49
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.15 E-value=1.2 Score=38.16 Aligned_cols=55 Identities=13% Similarity=0.129 Sum_probs=43.2
Q ss_pred ceEEEEEEEEecCC-CceEEEEEeC-CCceeEEEecCeEEEecCCcEEEEEEEEEecc
Q 044993 623 GSVTVTRKLKNVGT-PGTYKAQVKE-IPGISTDVEPSSLTFTHVNEEKTFKITFTLAQ 678 (713)
Q Consensus 623 ~~~t~~~tvtn~~~-~~ty~~~~~~-~~g~~v~~~p~~l~~~~~g~~~~~~v~~~~~~ 678 (713)
...+.+.+++|.|. +..|++.... +.+...+++|..-.+ ++|++.+++|+|....
T Consensus 26 ~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i-~pg~~~~i~V~f~~~~ 82 (112)
T 2e6j_A 26 SAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGII-EPSGVQAIQISFSSII 82 (112)
T ss_dssp CCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEE-CTTBCCEEEEEECCCC
T ss_pred CEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEE-CCCCEEEEEEEEECCC
Confidence 45777889999999 9999984321 123457889999999 7899999999998854
No 50
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=84.54 E-value=0.92 Score=52.20 Aligned_cols=62 Identities=23% Similarity=0.331 Sum_probs=47.9
Q ss_pred cccccCeEEEEEe-----chhhHHHhhcCceEEEEccC-------------------------Cccc-----cc------
Q 044993 356 RKKVQGRILVCLH-----EEKGYEAAKKGAVAMITGAS-------------------------GTFS-----AS------ 394 (713)
Q Consensus 356 ~~~~~gkivl~~~-----~~k~~~~~~~Ga~g~i~~~~-------------------------g~~~-----~~------ 394 (713)
..+++|||||+++ .+|..+|+++||.|+||..+ |.+. .+
T Consensus 150 ~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~ 229 (707)
T 3fed_A 150 GINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGY 229 (707)
T ss_dssp CCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTS
T ss_pred CCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCCCC
Confidence 4579999999998 68999999999999999211 1010 01
Q ss_pred ----------------CCcccEEEeehhhHHHHHHHHhc
Q 044993 395 ----------------YGFLPVTKLKIKDFEAVLDYIKS 417 (713)
Q Consensus 395 ----------------~~~~p~~~i~~~~g~~l~~~~~~ 417 (713)
...||+.-|+..+++.|+..+..
T Consensus 230 ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 230 PAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp CCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred cccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 24689999999999999987754
No 51
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=83.07 E-value=1.5 Score=49.81 Aligned_cols=60 Identities=17% Similarity=0.262 Sum_probs=45.9
Q ss_pred ccccCeEEEEEe-----chhhHHHhhcCceEEEE-ccC-C--c------------------ccc----------------
Q 044993 357 KKVQGRILVCLH-----EEKGYEAAKKGAVAMIT-GAS-G--T------------------FSA---------------- 393 (713)
Q Consensus 357 ~~~~gkivl~~~-----~~k~~~~~~~Ga~g~i~-~~~-g--~------------------~~~---------------- 393 (713)
.+++|||||+.+ ..|..+++++||.|+|+ +.. + . +.+
T Consensus 128 vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~~ 207 (640)
T 3kas_A 128 TPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSS 207 (640)
T ss_dssp SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSSC
T ss_pred cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCccccccccccccccc
Confidence 479999999998 57999999999999999 211 1 0 000
Q ss_pred cCCcccEEEeehhhHHHHHHHHh
Q 044993 394 SYGFLPVTKLKIKDFEAVLDYIK 416 (713)
Q Consensus 394 ~~~~~p~~~i~~~~g~~l~~~~~ 416 (713)
....+|+..|+.++++.|++.+.
T Consensus 208 ~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 208 GLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCSSCEEECCHHHHHHHHTTEE
T ss_pred CCCCCCEEecCHHHHHHHHHHcc
Confidence 02358999999999999988654
No 52
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=82.33 E-value=5.6 Score=34.39 Aligned_cols=53 Identities=17% Similarity=0.145 Sum_probs=44.1
Q ss_pred eEEEEEEEEecCC-CceEEEEEeCCCceeEEEecCeEEEecCCcEEEEEEEEEecc
Q 044993 624 SVTVTRKLKNVGT-PGTYKAQVKEIPGISTDVEPSSLTFTHVNEEKTFKITFTLAQ 678 (713)
Q Consensus 624 ~~t~~~tvtn~~~-~~ty~~~~~~~~g~~v~~~p~~l~~~~~g~~~~~~v~~~~~~ 678 (713)
....+.+|.|... +.+|++++...+++++. .+..+++ ++++..++.|.+.++.
T Consensus 32 ~N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v-~~g~~~~~~v~v~~~~ 85 (118)
T 2r39_A 32 ENTYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQV-EPGEVLNLPMSLGADP 85 (118)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEE-CTTCEEEEEEEEEECG
T ss_pred EEEEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEE-CCCCEEEEEEEEEECh
Confidence 4568889999999 99999999987776654 3566888 7899999999999866
No 53
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=82.15 E-value=0.84 Score=49.60 Aligned_cols=31 Identities=23% Similarity=0.343 Sum_probs=26.7
Q ss_pred cCCCccccccCCCCCCCCCCCCCCceeeCCCcEEeeecC
Q 044993 435 EPSPAVASFSSRGPNRIDPSIIKPDVIAPGVNIVAAYTS 473 (713)
Q Consensus 435 ~~~~~~a~fSS~GPt~~~~~~~KPDI~APG~~I~sa~~~ 473 (713)
...+.++.||++||.. ||+|||+.|+++++.
T Consensus 181 ~~~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~ 211 (441)
T 1y9z_A 181 DSNLDHAAFSQYTDQV--------EISGPGEAILSTVTV 211 (441)
T ss_dssp CTTCCBCTTSCCCTTE--------EEEEECSSEEEECST
T ss_pred CCCCCCCccccCCCce--------EEEeccCCeeccccC
Confidence 3357799999999865 999999999999875
No 54
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=72.76 E-value=32 Score=36.03 Aligned_cols=87 Identities=15% Similarity=0.074 Sum_probs=58.9
Q ss_pred ceEEEEEEEEecCC-CceEEEEEeCCCce----eEEEecCeEEEecCCcEEEEEEEEEeccCC--CCCCCCCeEEEEEEE
Q 044993 623 GSVTVTRKLKNVGT-PGTYKAQVKEIPGI----STDVEPSSLTFTHVNEEKTFKITFTLAQNA--KPNATNDYVFGELIW 695 (713)
Q Consensus 623 ~~~t~~~tvtn~~~-~~ty~~~~~~~~g~----~v~~~p~~l~~~~~g~~~~~~v~~~~~~~~--~~~~~~~~~~G~l~~ 695 (713)
...+-+.+|+|.|. +.+|++.-...... =++++|..-++ .+|++.+++|++.+.... +......-++--|++
T Consensus 46 ~~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l-~Pge~~~i~l~~~v~~~~~~~ln~g~~~l~diLvL 124 (366)
T 3qis_A 46 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILVL 124 (366)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCTTTHHHHHHTSSCSCEEEEE
T ss_pred CeEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEE-CCCCEEEEEEEEEECHHHHHHHhcCccccceEEEE
Confidence 56777889999999 99999975432222 27889999999 789999999999886510 000012234455665
Q ss_pred E-cCCcEEEeeEEEEe
Q 044993 696 S-DGTHRVRSPIALKQ 710 (713)
Q Consensus 696 ~-~~~~~v~~P~~~~~ 710 (713)
. ++++...+|+-..+
T Consensus 125 ~ve~G~d~FI~v~~~~ 140 (366)
T 3qis_A 125 HLDRGKDYFLTISGNY 140 (366)
T ss_dssp EETTSCEEEEEEEEEE
T ss_pred EEeCCCcEEEEecccc
Confidence 4 56667777776554
No 55
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=70.92 E-value=16 Score=35.22 Aligned_cols=78 Identities=10% Similarity=0.063 Sum_probs=51.3
Q ss_pred ceEEEEEEEEecCC-CceEEEEEeCCCceeEEEecCeEEEecCCcEEEEEEEEEeccCCCCCCCCCeEEEEEEEE--c--
Q 044993 623 GSVTVTRKLKNVGT-PGTYKAQVKEIPGISTDVEPSSLTFTHVNEEKTFKITFTLAQNAKPNATNDYVFGELIWS--D-- 697 (713)
Q Consensus 623 ~~~t~~~tvtn~~~-~~ty~~~~~~~~g~~v~~~p~~l~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~~G~l~~~--~-- 697 (713)
...+.+.+++|.|+ +.+++... .|.-.++..+| -++ ++|++.+++|++.... ...-+...+.|++. +
T Consensus 19 ~~~~~~~~i~N~g~~pl~i~~~~-~p~~~~~~~~~--~~I-~PG~~g~I~vt~~~~~----~~~~G~~~~~i~v~~~~~~ 90 (220)
T 2qsv_A 19 DEGVVRLVVNNTDESDLQVAVVS-LPSFVSLDDRA--FRL-QAREPRELNLSLAVPR----NMPPGMKDEPLVLEVTSPE 90 (220)
T ss_dssp CCCEEEEEEEECSSSCEEEEEEE-CCTTEECSCCE--EEE-CSSSCEEEEEEECCCT----TCCSEEEEEEEEEEEECTT
T ss_pred CcceEEEEEEeCCCCceEEEecc-CCCceEeeeCc--cee-CCCCceEEEEEEcchh----cccCCceeeEEEEEEEcCC
Confidence 45667889999998 88877653 36555554333 445 7899999999998755 33345567777775 3
Q ss_pred CCc--EEEeeEEE
Q 044993 698 GTH--RVRSPIAL 708 (713)
Q Consensus 698 ~~~--~v~~P~~~ 708 (713)
+.. ..++|+..
T Consensus 91 ~~~~~~~~i~v~g 103 (220)
T 2qsv_A 91 TGKKAVDSVMVSL 103 (220)
T ss_dssp TCCEEEEEEEEEE
T ss_pred CCcccccEEEEEE
Confidence 322 34666654
No 56
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=62.01 E-value=39 Score=29.53 Aligned_cols=50 Identities=20% Similarity=0.183 Sum_probs=35.2
Q ss_pred ceEEEEEEEEecCC--CceEEEEEeCCCceeEEEecCeEEEecCCcEEEEEEEEEe
Q 044993 623 GSVTVTRKLKNVGT--PGTYKAQVKEIPGISTDVEPSSLTFTHVNEEKTFKITFTL 676 (713)
Q Consensus 623 ~~~t~~~tvtn~~~--~~ty~~~~~~~~g~~v~~~p~~l~~~~~g~~~~~~v~~~~ 676 (713)
...+++.+|+|.|. ...|++.+-. .|..+.-. .+.+ ++|++++++++...
T Consensus 33 ~~~ti~vtV~N~G~~~a~~~~V~lyv-ng~~v~t~--~v~L-a~G~s~tv~f~~~~ 84 (127)
T 3idu_A 33 KLAEYEVHVKNLGGIGVPSTKVRVYI-NGTLYKNW--TVSL-GPKEEKVLTFNWTP 84 (127)
T ss_dssp CCEEEEEEEEECSSSCEEEEEEEEEE-TTEEEEEE--EEEE-CTTCEEEEEEEECC
T ss_pred CEEEEEEEEEECCCCccCCcEEEEEE-CCEEEeeE--Eecc-CCCCeEEEEEEEEc
Confidence 67899999999998 4778887655 34444332 3456 77888887777753
No 57
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=52.48 E-value=36 Score=39.05 Aligned_cols=56 Identities=18% Similarity=0.110 Sum_probs=36.7
Q ss_pred ceEEEEEEEEecCC-CceEEEE--EeCCCce-----eEEEecCeEEEecCCcEEEEEEEEEeccC
Q 044993 623 GSVTVTRKLKNVGT-PGTYKAQ--VKEIPGI-----STDVEPSSLTFTHVNEEKTFKITFTLAQN 679 (713)
Q Consensus 623 ~~~t~~~tvtn~~~-~~ty~~~--~~~~~g~-----~v~~~p~~l~~~~~g~~~~~~v~~~~~~~ 679 (713)
...+++++|||+|+ ...-.++ +..|.+. .--.-=.++.+ ++||+++++++++..+.
T Consensus 613 ~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF~kv~L-~pGes~~V~~~l~~~~l 676 (713)
T 3zyz_A 613 NVATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGFAKLNL-TPGQSGTATFNIRRRDL 676 (713)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEEEEEEE-CTTCEEEEEEEEEGGGG
T ss_pred CeEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhccccee-CCCCeEEEEEEEcHHHe
Confidence 45789999999998 6655555 3444321 11111234556 78999999999987653
No 58
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=48.26 E-value=1e+02 Score=34.21 Aligned_cols=63 Identities=17% Similarity=0.151 Sum_probs=43.9
Q ss_pred CCceEEeecCCceEEEEEEEEecCC-CceE-EEEEeCCCceeEEEecCeEEEecCCcEEEEEEEEEecc
Q 044993 612 NYPSIAIPELAGSVTVTRKLKNVGT-PGTY-KAQVKEIPGISTDVEPSSLTFTHVNEEKTFKITFTLAQ 678 (713)
Q Consensus 612 n~ps~~~~~~~~~~t~~~tvtn~~~-~~ty-~~~~~~~~g~~v~~~p~~l~~~~~g~~~~~~v~~~~~~ 678 (713)
..|.+++..- .+.+++.+|+|.+. ...- ++++..|.+.+++. ....+ ++|++.+++++|+++.
T Consensus 363 ~~~~~~~~~g-~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~g~~~t~~~~vt~~~ 427 (601)
T 1w8o_A 363 TIPDVALEPG-QQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPL-MPGRQAKGQVTITVPA 427 (601)
T ss_dssp ECCCEEECTT-CEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCB-CTTCEEEEEEEEECCT
T ss_pred cCccceecCC-ceeEEEEEEECCCceeccCceEEEecCCCcEEec--ccccc-CCCCceEEEEEEecCC
Confidence 3466666653 67889999999765 3222 44466688888776 34445 6799999999998866
No 59
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=47.89 E-value=35 Score=39.29 Aligned_cols=56 Identities=14% Similarity=0.179 Sum_probs=35.5
Q ss_pred ceEEEEEEEEecCC-CceEEEE--EeCCCce-----eEEEecCeE-EEecCCcEEEEEEEEEeccC
Q 044993 623 GSVTVTRKLKNVGT-PGTYKAQ--VKEIPGI-----STDVEPSSL-TFTHVNEEKTFKITFTLAQN 679 (713)
Q Consensus 623 ~~~t~~~tvtn~~~-~~ty~~~--~~~~~g~-----~v~~~p~~l-~~~~~g~~~~~~v~~~~~~~ 679 (713)
...+++++|||+|+ ...-.++ +..|.+. .--.-=.++ .+ ++||+++++++++..+.
T Consensus 615 ~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~~L-~pGes~~V~~~l~~~~l 679 (721)
T 2x41_A 615 ETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLL-NPGESEEVVLEIPVRDL 679 (721)
T ss_dssp SEEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEEEEECCCB-CTTCEEEEEEEEEGGGG
T ss_pred CeEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhhcccccccC-CCCCeEEEEEEECHHHh
Confidence 56889999999998 5444443 4444321 111111233 34 78999999999988664
No 60
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=43.94 E-value=16 Score=27.37 Aligned_cols=34 Identities=18% Similarity=0.165 Sum_probs=26.7
Q ss_pred cchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcc
Q 044993 496 SMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTA 529 (713)
Q Consensus 496 SmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA 529 (713)
|-..|..--.+..|++.||+++...|+.+|...=
T Consensus 3 ~~~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~ 36 (59)
T 1wgl_A 3 SGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQR 36 (59)
T ss_dssp SCSSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTT
T ss_pred CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcC
Confidence 3344445556788999999999999999998764
No 61
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=43.00 E-value=1.2e+02 Score=25.23 Aligned_cols=64 Identities=11% Similarity=0.044 Sum_probs=44.2
Q ss_pred eEEeecCCceEEEEEEEEecCC-CceEEEEEeCCCceeEEEecCeEEEecCCcEEEEEEEEEeccCCCCCCCCCeEEEEE
Q 044993 615 SIAIPELAGSVTVTRKLKNVGT-PGTYKAQVKEIPGISTDVEPSSLTFTHVNEEKTFKITFTLAQNAKPNATNDYVFGEL 693 (713)
Q Consensus 615 s~~~~~~~~~~t~~~tvtn~~~-~~ty~~~~~~~~g~~v~~~p~~l~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~~G~l 693 (713)
.++|.+......++++|+|-.. ...|.-....|.-+.+. + ...++-+|.|.+.... .++.|..
T Consensus 35 vlsV~F~~~~~~vTItItNe~TG~~VYs~~~s~p~~i~Id-------L-nge~sG~Y~IeI~~~~--------~~LtG~F 98 (101)
T 3sd2_A 35 ILNVSFGRAKDYAIITVTNKATGEIVHSKTYHNTSIVMID-------M-SSCEKGEYTIHIILND--------CLLEGTF 98 (101)
T ss_dssp EEEEEESSCCSCEEEEEEETTTCCEEEEEEESSCSEEEEE-------C-TTSCSEEEEEEEEETT--------EEEEEEE
T ss_pred EEEEEeccCCCcEEEEEEECCCCcEEEEEeccCCcEEEEE-------c-CCCcCceEEEEEEeCC--------cEEEEEE
Confidence 6666666667788999999866 88888777665322222 2 2335788999888755 6777765
Q ss_pred E
Q 044993 694 I 694 (713)
Q Consensus 694 ~ 694 (713)
+
T Consensus 99 ~ 99 (101)
T 3sd2_A 99 T 99 (101)
T ss_dssp E
T ss_pred E
Confidence 4
No 62
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=42.40 E-value=66 Score=27.86 Aligned_cols=52 Identities=19% Similarity=0.123 Sum_probs=42.7
Q ss_pred ceEEEEEEEEecCC-CceEEEEEeCCCceeEEEecCeEEEecCCcEEEEEEEEEec
Q 044993 623 GSVTVTRKLKNVGT-PGTYKAQVKEIPGISTDVEPSSLTFTHVNEEKTFKITFTLA 677 (713)
Q Consensus 623 ~~~t~~~tvtn~~~-~~ty~~~~~~~~g~~v~~~p~~l~~~~~g~~~~~~v~~~~~ 677 (713)
...+-..+|+|.++ ..-|.+...+|.- ..|.|..=.+ .++++.++.|++...
T Consensus 27 ~~~~~~l~L~N~s~~~vaFKVKTT~p~~--y~VrP~~G~i-~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 27 DVVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGVI-DPGSIVTVSVMLQPF 79 (128)
T ss_dssp SCEEEEEEEECCSSSCEEEEEEESCGGG--EEEESCEEEE-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCeEEEEEECCCCCc--eEEeCCCcEE-CCCCeEEEEEEECcC
Confidence 45677889999999 9999999888854 5567888666 789999999998764
No 63
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=40.26 E-value=1.2e+02 Score=29.00 Aligned_cols=77 Identities=9% Similarity=0.190 Sum_probs=46.3
Q ss_pred ceEEEEEEEEecCC-CceEEEEEeCCCceeEEEecCeEEEecCCcEEEEEEEEEeccCCCCCCCCC-e--EEEEEEEE-c
Q 044993 623 GSVTVTRKLKNVGT-PGTYKAQVKEIPGISTDVEPSSLTFTHVNEEKTFKITFTLAQNAKPNATND-Y--VFGELIWS-D 697 (713)
Q Consensus 623 ~~~t~~~tvtn~~~-~~ty~~~~~~~~g~~v~~~p~~l~~~~~g~~~~~~v~~~~~~~~~~~~~~~-~--~~G~l~~~-~ 697 (713)
...+.+++++|.|. +...+--.....-..++... -.+ ++||+.+++|++.... ..+. | ....|++. +
T Consensus 134 ~~~~~~f~i~N~G~~pL~I~~v~~scgct~~~~~~--~~i-~PGe~~~i~v~~~~~~-----~~g~~~~~~~~~i~v~~N 205 (220)
T 2qsv_A 134 ETTKAAIEIRNVGAGPLRLHSVTTRNPALTAVPDR--TEI-KPGGSTLLRIAVDPQV-----MKAEGWQSIAADISIICN 205 (220)
T ss_dssp SCEEEEEEEEECSSSCEEEEEEEECSTTEEEEESC--SEE-CTTCEEEEEEEECHHH-----HHHTTCSEEEEEEEEEES
T ss_pred CeEEEEEEEEECCCCCEEEEEEEeCCCCEeeecCC--ccC-CCCCEEEEEEEEecCC-----CCCcccceeccEEEEEEC
Confidence 56778899999997 66654323333334444433 345 7899999999998754 2122 1 56677664 3
Q ss_pred C--CcEEEeeEE
Q 044993 698 G--THRVRSPIA 707 (713)
Q Consensus 698 ~--~~~v~~P~~ 707 (713)
+ ...+++.|-
T Consensus 206 ~~~~p~~~l~i~ 217 (220)
T 2qsv_A 206 DPQAPLRRIKVK 217 (220)
T ss_dssp CTTCSEEEEEEE
T ss_pred CCCCcEEEEEEE
Confidence 2 344455554
No 64
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=39.37 E-value=83 Score=36.81 Aligned_cols=44 Identities=14% Similarity=0.158 Sum_probs=33.7
Q ss_pred ceeeeccccchhhHHHHHHHHHHHhCCCCC-HHHHHHHHHhcccc
Q 044993 488 AFTAMDGTSMSTPIVAGIAGLIKTVHPDWS-PAAIKSAIMTTARA 531 (713)
Q Consensus 488 ~y~~~sGTSmAaP~VAG~aALl~q~~p~~s-p~~ik~~L~~TA~~ 531 (713)
-...++|..++-|-+--+-|+|..++|.-- ...|-.+|.--..|
T Consensus 618 VVVl~sG~pv~m~w~~~v~AIL~aw~pGqegG~AiAdVLfG~vNP 662 (845)
T 3abz_A 618 VIVNQSGTPVEFPWLEDANALVQAWYGGNELGNAIADVLYGDVVP 662 (845)
T ss_dssp EEEEECSSCCCCTTGGGCSEEEECCCCCTTHHHHHHHHHTTSSCC
T ss_pred EEEEeCCCcccCcchhccCeEEEcCCCcHHHHHHHHHHhcCCcCC
Confidence 456778888888888888888888888765 56778888766554
No 65
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=36.50 E-value=83 Score=27.21 Aligned_cols=50 Identities=14% Similarity=0.187 Sum_probs=41.3
Q ss_pred eEEEEEEEEecCC-CceEEEEEeCCCceeEEEecCeEEEecCCcEEEEEEEEEe
Q 044993 624 SVTVTRKLKNVGT-PGTYKAQVKEIPGISTDVEPSSLTFTHVNEEKTFKITFTL 676 (713)
Q Consensus 624 ~~t~~~tvtn~~~-~~ty~~~~~~~~g~~v~~~p~~l~~~~~g~~~~~~v~~~~ 676 (713)
..+-..+|+|.++ ..-|.+...+|.- ..|.|..=.+ .++++..+.|++..
T Consensus 26 ~~~~~l~l~N~s~~~vaFKVKTT~p~~--y~VrP~~Gii-~P~~s~~v~V~~q~ 76 (126)
T 1msp_A 26 KHTYHIKITNAGGRRIGWAIKTTNMRR--LSVDPPCGVL-DPKEKVLMAVSCDT 76 (126)
T ss_dssp CCCEEEEEEECSSSCEEEEEEESCTTT--EEEESCEEEE-CTTCEEEEEEEECC
T ss_pred ceEEEEEEECCCCCeEEEEEEcCCCCc--EEEECCCeEE-CCCCEEEEEEEecC
Confidence 4566788999999 8999999998865 4567888777 78999999998877
No 66
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=35.74 E-value=1.3e+02 Score=25.64 Aligned_cols=50 Identities=10% Similarity=0.038 Sum_probs=39.7
Q ss_pred EEEEEEEEecCC-CceEEEEEeCCCceeEEEecCeEEEecCCcEEEEEEEEEec
Q 044993 625 VTVTRKLKNVGT-PGTYKAQVKEIPGISTDVEPSSLTFTHVNEEKTFKITFTLA 677 (713)
Q Consensus 625 ~t~~~tvtn~~~-~~ty~~~~~~~~g~~v~~~p~~l~~~~~g~~~~~~v~~~~~ 677 (713)
.+.+.+|+|.++ ...|.+....|.- ..|.|..=-+ .+|++.++.|+....
T Consensus 25 g~~~l~L~N~t~~~vAFKVKtT~p~~--YrVrP~~G~I-~Pg~~~~I~I~~q~~ 75 (116)
T 1m1s_A 25 GNSTHNITSESDSRLAFKVKSSNNEH--YRVRPVYGFV-DAKGKSKLDINRLPG 75 (116)
T ss_dssp EEEEEEEEECSSSEEEEEEEESCTTT--EEEECSEEEE-CTTCEEEEEEEECSC
T ss_pred CEEEEEEECCCCCeEEEEEEecCCCc--eEEcCCceEE-CCCCeEEEEEEeCCC
Confidence 367788999998 8889988887755 4557877666 789999999988764
No 67
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=34.74 E-value=97 Score=27.81 Aligned_cols=52 Identities=15% Similarity=0.098 Sum_probs=42.4
Q ss_pred ceEEEEEEEEecCC-CceEEEEEeCCCceeEEEecCeEEEecCCcEEEEEEEEEec
Q 044993 623 GSVTVTRKLKNVGT-PGTYKAQVKEIPGISTDVEPSSLTFTHVNEEKTFKITFTLA 677 (713)
Q Consensus 623 ~~~t~~~tvtn~~~-~~ty~~~~~~~~g~~v~~~p~~l~~~~~g~~~~~~v~~~~~ 677 (713)
...+-.++|+|.+. ...|++....|.- ..|.|..=.+ .++++.++.|++...
T Consensus 35 ~~~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 35 GEKKTLIVLTNVTKNIVAFKVRTTAPEK--YRVKPSNSSC-DPGASIDIIVSPHGG 87 (152)
T ss_dssp SCCCEEEEEEBCSSSCEEEEEEESCTTT--EEEESSEEEE-CTTCEEEEEEEECSS
T ss_pred ceEEEEEEEEcCCCCeEEEEEECCCCCc--eeecCCCcEE-CCCCeEEEEEEecCc
Confidence 34466789999999 9999999988864 5567988777 789999999999764
No 68
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=32.58 E-value=1.4e+02 Score=25.14 Aligned_cols=49 Identities=22% Similarity=0.138 Sum_probs=39.4
Q ss_pred EEEEEEEecCC-CceEEEEEeCCCceeEEEecCeEEEecCCcEEEEEEEEEec
Q 044993 626 TVTRKLKNVGT-PGTYKAQVKEIPGISTDVEPSSLTFTHVNEEKTFKITFTLA 677 (713)
Q Consensus 626 t~~~tvtn~~~-~~ty~~~~~~~~g~~v~~~p~~l~~~~~g~~~~~~v~~~~~ 677 (713)
+-+.+|+|.++ ...|.+.-..|.- ..|.|..=.+ .+|++.++.|+....
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT~p~~--y~VrP~~G~I-~P~~~~~i~I~~q~~ 67 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSSNNNE--YRIAPVFGFV-DPSGSKDVVITRTAG 67 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEESCSSS--EEEECSEEEE-CTTEEEEEEEEECSC
T ss_pred eEEEEEEcCCCCeEEEEEEeCCCCc--eEEcCCceEE-CCCCeEEEEEEeCCC
Confidence 46788899998 8999999888755 4567887666 789999999988763
No 69
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=30.59 E-value=13 Score=32.06 Aligned_cols=52 Identities=15% Similarity=0.226 Sum_probs=32.4
Q ss_pred EEEEEEEecCCCceEE--EEEe-CCCceeEEEecCeEEEe-cCCcEEEEEEEEEecc
Q 044993 626 TVTRKLKNVGTPGTYK--AQVK-EIPGISTDVEPSSLTFT-HVNEEKTFKITFTLAQ 678 (713)
Q Consensus 626 t~~~tvtn~~~~~ty~--~~~~-~~~g~~v~~~p~~l~~~-~~g~~~~~~v~~~~~~ 678 (713)
.+...+++.+ ..+|+ +.+. .|.|++++++|..+++. ..-.+++|.|++....
T Consensus 56 ~~~vDLs~l~-~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~~g 111 (119)
T 2kq1_A 56 EVFVDLTEAG-EGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEMIN 111 (119)
T ss_dssp EEEEECTTCC-BEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCCCC
T ss_pred EEEEECccCC-CCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEECC
Confidence 3444445555 34444 4455 68899999999987764 2345667777666543
No 70
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=28.85 E-value=90 Score=27.78 Aligned_cols=52 Identities=19% Similarity=0.119 Sum_probs=41.9
Q ss_pred ceEEEEEEEEecCC-CceEEEEEeCCCceeEEEecCeEEEecCCcEEEEEEEEEec
Q 044993 623 GSVTVTRKLKNVGT-PGTYKAQVKEIPGISTDVEPSSLTFTHVNEEKTFKITFTLA 677 (713)
Q Consensus 623 ~~~t~~~tvtn~~~-~~ty~~~~~~~~g~~v~~~p~~l~~~~~g~~~~~~v~~~~~ 677 (713)
...+-.++|+|.+. ..-|++....|.- ..|.|..=.+ .++++..+.|++...
T Consensus 31 ~~~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 31 DVVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGII-DPGSIVTVSVMLQPF 83 (147)
T ss_dssp SCCCEEEEEECCSSSCEEEEEEESCTTS--EEEESSEEEC-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCcEEEEEECCCCcc--EEEcCCCcEE-CCCCeEEEEEEECCC
Confidence 34566788999999 9999999998865 4567887656 789999999998764
No 71
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=28.74 E-value=41 Score=30.50 Aligned_cols=33 Identities=21% Similarity=0.278 Sum_probs=27.5
Q ss_pred eeccccchhhHHHHHHHHHHHhCCCCCHHHHHHH
Q 044993 491 AMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSA 524 (713)
Q Consensus 491 ~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~ 524 (713)
.+.|-| =|++|-|.+|||.+.+-..+|++|.+.
T Consensus 78 ~F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~~ 110 (155)
T 1ni7_A 78 HFFGDS-EGRIVRGLLAVLLTAVEGKTAAELQAQ 110 (155)
T ss_dssp CCEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHHS
T ss_pred EEeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHhC
Confidence 344555 478999999999999999999998753
No 72
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=27.85 E-value=2.7e+02 Score=23.85 Aligned_cols=53 Identities=15% Similarity=0.121 Sum_probs=35.0
Q ss_pred CceEEEEEEEEecCC-Cce--------EEEEEeCCCceeEE---------EecCeEEEecCCcEEEEEEEEE
Q 044993 622 AGSVTVTRKLKNVGT-PGT--------YKAQVKEIPGISTD---------VEPSSLTFTHVNEEKTFKITFT 675 (713)
Q Consensus 622 ~~~~t~~~tvtn~~~-~~t--------y~~~~~~~~g~~v~---------~~p~~l~~~~~g~~~~~~v~~~ 675 (713)
.+...++++|+|.++ +.+ |.+.+....|-.|- -.....+| ++||+++|+++..
T Consensus 17 g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl-~pGE~~~f~~~w~ 87 (120)
T 3isy_A 17 PEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTL-ESGETYDFSDVWK 87 (120)
T ss_dssp SSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEE-CTTCEEEEEEEES
T ss_pred CCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEE-CCCCEEEEEEEeC
Confidence 367888999999885 443 34445444443333 22235667 7899999999997
No 73
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=25.70 E-value=2.1e+02 Score=24.25 Aligned_cols=23 Identities=17% Similarity=0.319 Sum_probs=17.6
Q ss_pred ceEEEEEEEEecCC--CceEEEEEe
Q 044993 623 GSVTVTRKLKNVGT--PGTYKAQVK 645 (713)
Q Consensus 623 ~~~t~~~tvtn~~~--~~ty~~~~~ 645 (713)
...+++.+|+|.|. ...+.+.+.
T Consensus 19 ~~~ti~atVkN~G~~~a~~~~V~ly 43 (114)
T 2l0d_A 19 TVNTMTATIENQGNKDSTSFNVSLL 43 (114)
T ss_dssp SEEEEEEEEEECSSSCBCCEEEEEE
T ss_pred CeEEEEEEEEECCCCCCCCEEEEEE
Confidence 67899999999997 455666543
No 74
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=24.62 E-value=39 Score=30.10 Aligned_cols=33 Identities=18% Similarity=0.328 Sum_probs=28.2
Q ss_pred eeeccccchhhHHHHHHHHHHHhCCCCCHHHHHH
Q 044993 490 TAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKS 523 (713)
Q Consensus 490 ~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~ 523 (713)
..+.|-| =|++|-|.+|||.+.+-..+|++|.+
T Consensus 70 l~f~adS-DA~IvkGl~alL~~~~~G~tp~eIl~ 102 (141)
T 3g0m_A 70 IELQGDS-DAAIVKGLMAVVFILYHQMTAQDIVH 102 (141)
T ss_dssp EEEEEEE-SSHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred EEEEecC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 4556777 47899999999999999999999865
No 75
>1otr_A Protein CUE2; protein-protein complex, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.4
Probab=21.35 E-value=84 Score=22.45 Aligned_cols=24 Identities=8% Similarity=0.267 Sum_probs=21.2
Q ss_pred HHHHHHHhCCCCCHHHHHHHHHhc
Q 044993 505 IAGLIKTVHPDWSPAAIKSAIMTT 528 (713)
Q Consensus 505 ~aALl~q~~p~~sp~~ik~~L~~T 528 (713)
-+.+|.+.||+.+..+||..|...
T Consensus 7 ~v~~L~EMFP~~~~~~ik~~L~~~ 30 (49)
T 1otr_A 7 KLSILMDMFPAISKSKLQVHLLEN 30 (49)
T ss_dssp HHHHHHHHCSSSCHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHc
Confidence 457889999999999999999876
Done!