BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044995
(288 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 118/256 (46%), Gaps = 48/256 (18%)
Query: 2 IKKTKLFISNELEKATDSFNVNRILGQGGQDIVYKG------MAKVEK------------ 43
+ + K F EL+ A+D+F+ ILG+GG VYKG + V++
Sbjct: 22 LGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQ 81
Query: 44 FINEVVIQSQINHINVVKLIGCC-------LETKYMHDQN----------KELPFTWEMQ 86
F EV + S H N+++L G C L YM + + + P W +
Sbjct: 82 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKR 141
Query: 87 LRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITT 146
RI++ ++ ++YLH I HRD+K+ NILLD+++ A V +FG ++ H+
Sbjct: 142 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX 201
Query: 147 QVHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAK 195
V GT G++ P+ DV +GV+L+EL+TG + D ++ + K
Sbjct: 202 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 261
Query: 196 RCLNPSGKKRPAMKEV 211
L KK A+ +V
Sbjct: 262 GLLKE--KKLEALVDV 275
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 108/212 (50%), Gaps = 49/212 (23%)
Query: 12 ELEKATDSFNVNRILGQGGQDIVYKGM----AKV-------------EKFINEVVIQSQI 54
+LE+AT++F+ ++G G VYKG+ AKV E+F E+ S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 55 NHINVVKLIGCCLET-------KYMHDQN-------KELP---FTWEMQLRISIEASGTM 97
H ++V LIG C E KYM + N +LP +WE +L I I A+ +
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 98 SYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTS-RSRAVDQTHITTQVHGTFGYLN 156
YLH A I HRD+KS NILLD+ + K+++FG S + +DQTH+ V GT GY++
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 157 PD-----------DVCSFGVVLVELLTGAKPI 177
P+ DV SFGVVL E+L I
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI 241
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 116/256 (45%), Gaps = 48/256 (18%)
Query: 2 IKKTKLFISNELEKATDSFNVNRILGQGGQDIVYKG------MAKVEK------------ 43
+ + K F EL+ A+D+F ILG+GG VYKG + V++
Sbjct: 14 LGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQ 73
Query: 44 FINEVVIQSQINHINVVKLIGCC-------LETKYMHDQN----------KELPFTWEMQ 86
F EV + S H N+++L G C L YM + + + P W +
Sbjct: 74 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKR 133
Query: 87 LRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITT 146
RI++ ++ ++YLH I HRD+K+ NILLD+++ A V +FG ++ H+
Sbjct: 134 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX 193
Query: 147 QVHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAK 195
V G G++ P+ DV +GV+L+EL+TG + D ++ + K
Sbjct: 194 AVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253
Query: 196 RCLNPSGKKRPAMKEV 211
L KK A+ +V
Sbjct: 254 GLLKE--KKLEALVDV 267
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 107/212 (50%), Gaps = 49/212 (23%)
Query: 12 ELEKATDSFNVNRILGQGGQDIVYKGM----AKV-------------EKFINEVVIQSQI 54
+LE+AT++F+ ++G G VYKG+ AKV E+F E+ S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 55 NHINVVKLIGCCLET-------KYMHDQN-------KELP---FTWEMQLRISIEASGTM 97
H ++V LIG C E KYM + N +LP +WE +L I I A+ +
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 98 SYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTS-RSRAVDQTHITTQVHGTFGYLN 156
YLH A I HRD+KS NILLD+ + K+++FG S + + QTH+ V GT GY++
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYID 209
Query: 157 PD-----------DVCSFGVVLVELLTGAKPI 177
P+ DV SFGVVL E+L I
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI 241
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 109/217 (50%), Gaps = 60/217 (27%)
Query: 12 ELEKATDSFNVNRI------LGQGGQDIVYKG--------------MAKV------EKFI 45
EL+ T++F+ I +G+GG +VYKG M + ++F
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD 78
Query: 46 NEVVIQSQINHINVVKLIG-------CCLETKYMHDQNKEL-----------PFTWEMQL 87
E+ + ++ H N+V+L+G CL YM N L P +W M+
Sbjct: 79 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM--PNGSLLDRLSCLDGTPPLSWHMRC 136
Query: 88 RISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR-SRAVDQTHITT 146
+I+ A+ +++LH + + HRDIKS NILLD+ + AK+S+FG +R S QT + +
Sbjct: 137 KIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXS 193
Query: 147 QVHGTFGYLNPD----------DVCSFGVVLVELLTG 173
++ GT Y+ P+ D+ SFGVVL+E++TG
Sbjct: 194 RIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 108/217 (49%), Gaps = 60/217 (27%)
Query: 12 ELEKATDSFNVNRI------LGQGGQDIVYKG--------------MAKV------EKFI 45
EL+ T++F+ I +G+GG +VYKG M + ++F
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD 78
Query: 46 NEVVIQSQINHINVVKLIG-------CCLETKYMHDQNKEL-----------PFTWEMQL 87
E+ + ++ H N+V+L+G CL YM N L P +W M+
Sbjct: 79 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM--PNGSLLDRLSCLDGTPPLSWHMRC 136
Query: 88 RISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR-SRAVDQTHITT 146
+I+ A+ +++LH + + HRDIKS NILLD+ + AK+S+FG +R S QT +
Sbjct: 137 KIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXX 193
Query: 147 QVHGTFGYLNPD----------DVCSFGVVLVELLTG 173
++ GT Y+ P+ D+ SFGVVL+E++TG
Sbjct: 194 RIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 60/217 (27%)
Query: 12 ELEKATDSFNVNRI------LGQGGQDIVYKG--------------MAKV------EKFI 45
EL+ T++F+ I +G+GG +VYKG M + ++F
Sbjct: 13 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD 72
Query: 46 NEVVIQSQINHINVVKLIG-------CCLETKYMHDQNKEL-----------PFTWEMQL 87
E+ + ++ H N+V+L+G CL YM N L P +W M+
Sbjct: 73 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM--PNGSLLDRLSCLDGTPPLSWHMRC 130
Query: 88 RISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR-SRAVDQTHITT 146
+I+ A+ +++LH + + HRDIKS NILLD+ + AK+S+FG +R S Q +
Sbjct: 131 KIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXX 187
Query: 147 QVHGTFGYLNPD----------DVCSFGVVLVELLTG 173
++ GT Y+ P+ D+ SFGVVL+E++TG
Sbjct: 188 RIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 60/217 (27%)
Query: 12 ELEKATDSFNVNRI------LGQGGQDIVYKG--------------MAKV------EKFI 45
EL+ T++F+ I G+GG +VYKG M + ++F
Sbjct: 10 ELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD 69
Query: 46 NEVVIQSQINHINVVKLIG-------CCLETKYMHDQNKEL-----------PFTWEMQL 87
E+ + ++ H N+V+L+G CL Y++ N L P +W +
Sbjct: 70 QEIKVXAKCQHENLVELLGFSSDGDDLCL--VYVYXPNGSLLDRLSCLDGTPPLSWHXRC 127
Query: 88 RISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR-SRAVDQTHITT 146
+I+ A+ +++LH + + HRDIKS NILLD+ + AK+S+FG +R S Q +
Sbjct: 128 KIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXS 184
Query: 147 QVHGTFGYLNPD----------DVCSFGVVLVELLTG 173
++ GT Y P+ D+ SFGVVL+E++TG
Sbjct: 185 RIVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 110/274 (40%), Gaps = 78/274 (28%)
Query: 16 ATDSFNVNRILGQGGQDIVYKG-------------------------MAKVEKFINEVVI 50
A + + +G+GG +V+KG + K ++F EV I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 51 QSQINHINVVKLIGCCLETK------------YMHDQNKELPFTWEMQLRISIEASGTMS 98
S +NH N+VKL G Y +K P W ++LR+ ++ + +
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIE 136
Query: 99 YLHLSASVPIYHRDIKSTNILL-----DDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG 153
Y+ + + PI HRD++S NI L + CAKV++FGTS+ H + + G F
Sbjct: 137 YMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ----SVHSVSGLLGNFQ 191
Query: 154 YLNPD-------------DVCSFGVVLVELLTGAKP--------IRFT----------TF 182
++ P+ D SF ++L +LTG P I+F T
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTI 251
Query: 183 EEDKNITVAKHAKRCLNPSGKKRPAMKEVASELA 216
ED + + C + KKRP + EL+
Sbjct: 252 PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 109/274 (39%), Gaps = 78/274 (28%)
Query: 16 ATDSFNVNRILGQGGQDIVYKG-------------------------MAKVEKFINEVVI 50
A + + +G+GG +V+KG + K ++F EV I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 51 QSQINHINVVKLIGCCLETK------------YMHDQNKELPFTWEMQLRISIEASGTMS 98
S +NH N+VKL G Y +K P W ++LR+ ++ + +
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIE 136
Query: 99 YLHLSASVPIYHRDIKSTNILL-----DDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG 153
Y+ + + PI HRD++S NI L + CAKV++FG S+ H + + G F
Sbjct: 137 YMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ----SVHSVSGLLGNFQ 191
Query: 154 YLNPD-------------DVCSFGVVLVELLTGAKP--------IRFT----------TF 182
++ P+ D SF ++L +LTG P I+F T
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTI 251
Query: 183 EEDKNITVAKHAKRCLNPSGKKRPAMKEVASELA 216
ED + + C + KKRP + EL+
Sbjct: 252 PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 29/164 (17%)
Query: 40 KVEKFINEVVIQSQINHINVVKLIGCCLE-------TKYM---------HDQNKELPFTW 83
+V +F+ EV I ++ H N+V +G + T+Y+ H
Sbjct: 77 RVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDE 136
Query: 84 EMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH 143
+L ++ + + M+YLH + + PI HRD+KS N+L+D KY KV +FG SR +A
Sbjct: 137 RRRLSMAYDVAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKA-SXFL 194
Query: 144 ITTQVHGTFGYLNPD-----------DVCSFGVVLVELLTGAKP 176
+ GT ++ P+ DV SFGV+L EL T +P
Sbjct: 195 XSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 31/165 (18%)
Query: 40 KVEKFINEVVIQSQINHINVVKLIGCCLE-------TKYM---------HDQNKELPFTW 83
+V +F+ EV I ++ H N+V +G + T+Y+ H
Sbjct: 77 RVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDE 136
Query: 84 EMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH 143
+L ++ + + M+YLH + + PI HR++KS N+L+D KY KV +FG SR +A T
Sbjct: 137 RRRLSMAYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA--STF 193
Query: 144 ITTQ-VHGTFGYLNPD-----------DVCSFGVVLVELLTGAKP 176
++++ GT ++ P+ DV SFGV+L EL T +P
Sbjct: 194 LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 108/274 (39%), Gaps = 78/274 (28%)
Query: 16 ATDSFNVNRILGQGGQDIVYKG-------------------------MAKVEKFINEVVI 50
A + + +G+GG +V+KG + K ++F EV I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 51 QSQINHINVVKLIGCCLETK------------YMHDQNKELPFTWEMQLRISIEASGTMS 98
S +NH N+VKL G Y +K P W ++LR+ ++ + +
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIE 136
Query: 99 YLHLSASVPIYHRDIKSTNILL-----DDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG 153
Y+ + + PI HRD++S NI L + CAKV++F S+ H + + G F
Sbjct: 137 YMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQ----SVHSVSGLLGNFQ 191
Query: 154 YLNPD-------------DVCSFGVVLVELLTGAKP--------IRFT----------TF 182
++ P+ D SF ++L +LTG P I+F T
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTI 251
Query: 183 EEDKNITVAKHAKRCLNPSGKKRPAMKEVASELA 216
ED + + C + KKRP + EL+
Sbjct: 252 PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 50/213 (23%)
Query: 10 SNELEKATDSFNVNRILGQGGQDIVYKGM-----------------AKVEKFINEVVIQS 52
S++ E V + +G G VYKG +++ F NEV +
Sbjct: 16 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 75
Query: 53 QINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLRISIEASGTMSY 99
+ H+N++ +G C + Y H E F + + I+ + + M Y
Sbjct: 76 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDY 135
Query: 100 LHLSASVPIYHRDIKSTNILLDDKYCAKVSNFG--TSRSRAVDQTHITTQVHGTFGYLNP 157
LH + I HRD+KS NI L + K+ +FG T +SR +H Q+ G+ ++ P
Sbjct: 136 LHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW-SGSHQFEQLSGSILWMAP 191
Query: 158 D--------------DVCSFGVVLVELLTGAKP 176
+ DV +FG+VL EL+TG P
Sbjct: 192 EVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 50/213 (23%)
Query: 10 SNELEKATDSFNVNRILGQGGQDIVYKGM-----------------AKVEKFINEVVIQS 52
S++ E V + +G G VYKG +++ F NEV +
Sbjct: 4 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 63
Query: 53 QINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLRISIEASGTMSY 99
+ H+N++ +G C + Y H E F + + I+ + + M Y
Sbjct: 64 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDY 123
Query: 100 LHLSASVPIYHRDIKSTNILLDDKYCAKVSNFG--TSRSRAVDQTHITTQVHGTFGYLNP 157
LH + I HRD+KS NI L + K+ +FG T +SR +H Q+ G+ ++ P
Sbjct: 124 LHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRW-SGSHQFEQLSGSILWMAP 179
Query: 158 D--------------DVCSFGVVLVELLTGAKP 176
+ DV +FG+VL EL+TG P
Sbjct: 180 EVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 50/213 (23%)
Query: 10 SNELEKATDSFNVNRILGQGGQDIVYKGM-----------------AKVEKFINEVVIQS 52
+++ E V + +G G VYKG +++ F NEV +
Sbjct: 16 ADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 75
Query: 53 QINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLRISIEASGTMSY 99
+ H+N++ +G C + Y H E F + + I+ + + M Y
Sbjct: 76 KTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDY 135
Query: 100 LHLSASVPIYHRDIKSTNILLDDKYCAKVSNFG--TSRSRAVDQTHITTQVHGTFGYLNP 157
LH + I HRD+KS NI L + K+ +FG T +SR +H Q+ G+ ++ P
Sbjct: 136 LHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW-SGSHQFEQLSGSILWMAP 191
Query: 158 D--------------DVCSFGVVLVELLTGAKP 176
+ DV +FG+VL EL+TG P
Sbjct: 192 EVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 58/229 (25%)
Query: 41 VEKFINEVVIQSQINHINVVKLIGCCLETKYM--------------HDQNKELPFTWEMQ 86
+E E + + + H N++ L G CL+ + K +P ++
Sbjct: 50 IENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPP--DIL 107
Query: 87 LRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKY--------CAKVSNFGTSRSRA 138
+ +++ + M+YLH A VPI HRD+KS+NIL+ K K+++FG +R
Sbjct: 108 VNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR--- 164
Query: 139 VDQTHITTQVH--GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIR------- 178
+ H TT++ G + ++ P+ DV S+GV+L ELLTG P R
Sbjct: 165 --EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV 222
Query: 179 -FTTFEEDKNITV--------AKHAKRCLNPSGKKRPAMKEVASELAGI 218
+ + + AK + C NP RP+ + +L I
Sbjct: 223 AYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 89/213 (41%), Gaps = 50/213 (23%)
Query: 10 SNELEKATDSFNVNRILGQGGQDIVYKGM-----------------AKVEKFINEVVIQS 52
S++ E V + +G G VYKG +++ F NEV +
Sbjct: 28 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 87
Query: 53 QINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLRISIEASGTMSY 99
+ H+N++ +G C + Y H E F + I+ + + M Y
Sbjct: 88 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY 147
Query: 100 LHLSASVPIYHRDIKSTNILLDDKYCAKVSNFG--TSRSRAVDQTHITTQVHGTFGYLNP 157
LH + I HRD+KS NI L + K+ +FG T +SR +H Q+ G+ ++ P
Sbjct: 148 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRW-SGSHQFEQLSGSILWMAP 203
Query: 158 D--------------DVCSFGVVLVELLTGAKP 176
+ DV +FG+VL EL+TG P
Sbjct: 204 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 89/213 (41%), Gaps = 50/213 (23%)
Query: 10 SNELEKATDSFNVNRILGQGGQDIVYKGM-----------------AKVEKFINEVVIQS 52
S++ E V + +G G VYKG +++ F NEV +
Sbjct: 20 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 79
Query: 53 QINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLRISIEASGTMSY 99
+ H+N++ +G C + Y H E F + I+ + + M Y
Sbjct: 80 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY 139
Query: 100 LHLSASVPIYHRDIKSTNILLDDKYCAKVSNFG--TSRSRAVDQTHITTQVHGTFGYLNP 157
LH + I HRD+KS NI L + K+ +FG T +SR +H Q+ G+ ++ P
Sbjct: 140 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRW-SGSHQFEQLSGSILWMAP 195
Query: 158 D--------------DVCSFGVVLVELLTGAKP 176
+ DV +FG+VL EL+TG P
Sbjct: 196 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 89/213 (41%), Gaps = 50/213 (23%)
Query: 10 SNELEKATDSFNVNRILGQGGQDIVYKGM-----------------AKVEKFINEVVIQS 52
S++ E V + +G G VYKG +++ F NEV +
Sbjct: 28 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 87
Query: 53 QINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLRISIEASGTMSY 99
+ H+N++ +G C + Y H E F + I+ + + M Y
Sbjct: 88 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY 147
Query: 100 LHLSASVPIYHRDIKSTNILLDDKYCAKVSNFG--TSRSRAVDQTHITTQVHGTFGYLNP 157
LH + I HRD+KS NI L + K+ +FG T +SR +H Q+ G+ ++ P
Sbjct: 148 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW-SGSHQFEQLSGSILWMAP 203
Query: 158 D--------------DVCSFGVVLVELLTGAKP 176
+ DV +FG+VL EL+TG P
Sbjct: 204 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 89/213 (41%), Gaps = 50/213 (23%)
Query: 10 SNELEKATDSFNVNRILGQGGQDIVYKGM-----------------AKVEKFINEVVIQS 52
S++ E V + +G G VYKG +++ F NEV +
Sbjct: 5 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 64
Query: 53 QINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLRISIEASGTMSY 99
+ H+N++ +G C + Y H E F + I+ + + M Y
Sbjct: 65 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY 124
Query: 100 LHLSASVPIYHRDIKSTNILLDDKYCAKVSNFG--TSRSRAVDQTHITTQVHGTFGYLNP 157
LH + I HRD+KS NI L + K+ +FG T +SR +H Q+ G+ ++ P
Sbjct: 125 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW-SGSHQFEQLSGSILWMAP 180
Query: 158 D--------------DVCSFGVVLVELLTGAKP 176
+ DV +FG+VL EL+TG P
Sbjct: 181 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 89/213 (41%), Gaps = 50/213 (23%)
Query: 10 SNELEKATDSFNVNRILGQGGQDIVYKGM-----------------AKVEKFINEVVIQS 52
S++ E V + +G G VYKG +++ F NEV +
Sbjct: 27 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 86
Query: 53 QINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLRISIEASGTMSY 99
+ H+N++ +G C + Y H E F + I+ + + M Y
Sbjct: 87 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY 146
Query: 100 LHLSASVPIYHRDIKSTNILLDDKYCAKVSNFG--TSRSRAVDQTHITTQVHGTFGYLNP 157
LH + I HRD+KS NI L + K+ +FG T +SR +H Q+ G+ ++ P
Sbjct: 147 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW-SGSHQFEQLSGSILWMAP 202
Query: 158 D--------------DVCSFGVVLVELLTGAKP 176
+ DV +FG+VL EL+TG P
Sbjct: 203 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 89/213 (41%), Gaps = 50/213 (23%)
Query: 10 SNELEKATDSFNVNRILGQGGQDIVYKGM-----------------AKVEKFINEVVIQS 52
S++ E V + +G G VYKG +++ F NEV +
Sbjct: 2 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 61
Query: 53 QINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLRISIEASGTMSY 99
+ H+N++ +G C + Y H E F + I+ + + M Y
Sbjct: 62 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY 121
Query: 100 LHLSASVPIYHRDIKSTNILLDDKYCAKVSNFG--TSRSRAVDQTHITTQVHGTFGYLNP 157
LH + I HRD+KS NI L + K+ +FG T +SR +H Q+ G+ ++ P
Sbjct: 122 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW-SGSHQFEQLSGSILWMAP 177
Query: 158 D--------------DVCSFGVVLVELLTGAKP 176
+ DV +FG+VL EL+TG P
Sbjct: 178 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 89/213 (41%), Gaps = 50/213 (23%)
Query: 10 SNELEKATDSFNVNRILGQGGQDIVYKGM-----------------AKVEKFINEVVIQS 52
S++ E V + +G G VYKG +++ F NEV +
Sbjct: 5 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 64
Query: 53 QINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLRISIEASGTMSY 99
+ H+N++ +G C + Y H E F + I+ + + M Y
Sbjct: 65 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY 124
Query: 100 LHLSASVPIYHRDIKSTNILLDDKYCAKVSNFG--TSRSRAVDQTHITTQVHGTFGYLNP 157
LH + I HRD+KS NI L + K+ +FG T +SR +H Q+ G+ ++ P
Sbjct: 125 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW-SGSHQFEQLSGSILWMAP 180
Query: 158 D--------------DVCSFGVVLVELLTGAKP 176
+ DV +FG+VL EL+TG P
Sbjct: 181 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 61/211 (28%)
Query: 23 NRILGQGGQDIVYKG----------------------MAKVEKFINEVVIQSQINHINVV 60
+R++G+G +VY G M +VE F+ E ++ +NH NV+
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 61 KLIGCCLETKYMHDQNKELPF-----------------TWEMQLRISIEASGTMSYLHLS 103
LIG L + + + LP+ T + + ++ + M YL
Sbjct: 86 ALIGIMLPPEGL--PHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL--- 140
Query: 104 ASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH-------------- 149
A HRD+ + N +LD+ + KV++FG +R +D+ + + Q H
Sbjct: 141 AEQKFVHRDLAARNCMLDESFTVKVADFGLARD-ILDREYYSVQQHRHARLPVKWTALES 199
Query: 150 -GTFGYLNPDDVCSFGVVLVELLT-GAKPIR 178
T+ + DV SFGV+L ELLT GA P R
Sbjct: 200 LQTYRFTTKSDVWSFGVLLWELLTRGAPPYR 230
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 88/212 (41%), Gaps = 50/212 (23%)
Query: 11 NELEKATDSFNVNRILGQGGQDIVYKGM-----------------AKVEKFINEVVIQSQ 53
++ E V + +G G VYKG +++ F NEV + +
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 54 INHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLRISIEASGTMSYL 100
H+N++ +G C + Y H E F + I+ + + M YL
Sbjct: 61 TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 120
Query: 101 HLSASVPIYHRDIKSTNILLDDKYCAKVSNFG--TSRSRAVDQTHITTQVHGTFGYLNPD 158
H + I HRD+KS NI L + K+ +FG T +SR +H Q+ G+ ++ P+
Sbjct: 121 HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRW-SGSHQFEQLSGSILWMAPE 176
Query: 159 --------------DVCSFGVVLVELLTGAKP 176
DV +FG+VL EL+TG P
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 70/265 (26%)
Query: 21 NVNRILGQGGQDIVYKG----------------------MAKVEKFINEVVIQSQINHIN 58
+ N ++G+G VY G + +V +F+ E +I +H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 59 VVKLIGCCLETK--------YMHD-------QNKELPFTWEMQLRISIEASGTMSYLHLS 103
V+ L+G CL ++ YM +N+ T + + ++ + M +L
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 149
Query: 104 ASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR---SRAVDQTH-----------ITTQVH 149
AS HRD+ + N +LD+K+ KV++FG +R + D H + +
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 150 GTFGYLNPDDVCSFGVVLVELLT-GAKPI-RFTTFE------EDKNITVAKHAK------ 195
T + DV SFGV+L EL+T GA P TF+ + + + ++
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEV 269
Query: 196 --RCLNPSGKKRPAMKEVASELAGI 218
+C +P + RP+ E+ S ++ I
Sbjct: 270 MLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 70/265 (26%)
Query: 21 NVNRILGQGGQDIVYKG----------------------MAKVEKFINEVVIQSQINHIN 58
+ N ++G+G VY G + +V +F+ E +I +H N
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 59 VVKLIGCCLETK--------YMHD-------QNKELPFTWEMQLRISIEASGTMSYLHLS 103
V+ L+G CL ++ YM +N+ T + + ++ + M +L
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 208
Query: 104 ASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR---SRAVDQTH-----------ITTQVH 149
AS HRD+ + N +LD+K+ KV++FG +R + D H + +
Sbjct: 209 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 268
Query: 150 GTFGYLNPDDVCSFGVVLVELLT-GAKPI-RFTTFE------EDKNITVAKHAK------ 195
T + DV SFGV+L EL+T GA P TF+ + + + ++
Sbjct: 269 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEV 328
Query: 196 --RCLNPSGKKRPAMKEVASELAGI 218
+C +P + RP+ E+ S ++ I
Sbjct: 329 MLKCWHPKAEMRPSFSELVSRISAI 353
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 88/212 (41%), Gaps = 50/212 (23%)
Query: 11 NELEKATDSFNVNRILGQGGQDIVYKGM-----------------AKVEKFINEVVIQSQ 53
++ E V + +G G VYKG +++ F NEV + +
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 54 INHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLRISIEASGTMSYL 100
H+N++ +G C + Y H E F + I+ + + M YL
Sbjct: 61 TRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 120
Query: 101 HLSASVPIYHRDIKSTNILLDDKYCAKVSNFG--TSRSRAVDQTHITTQVHGTFGYLNPD 158
H + I HRD+KS NI L + K+ +FG T +SR +H Q+ G+ ++ P+
Sbjct: 121 HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW-SGSHQFEQLSGSILWMAPE 176
Query: 159 --------------DVCSFGVVLVELLTGAKP 176
DV +FG+VL EL+TG P
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 70/265 (26%)
Query: 21 NVNRILGQGGQDIVYKG----------------------MAKVEKFINEVVIQSQINHIN 58
+ N ++G+G VY G + +V +F+ E +I +H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 59 VVKLIGCCLETK--------YMHD-------QNKELPFTWEMQLRISIEASGTMSYLHLS 103
V+ L+G CL ++ YM +N+ T + + ++ + M +L
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 147
Query: 104 ASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR---SRAVDQTH-----------ITTQVH 149
AS HRD+ + N +LD+K+ KV++FG +R + D H + +
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 207
Query: 150 GTFGYLNPDDVCSFGVVLVELLT-GAKPI-RFTTFE------EDKNITVAKHAK------ 195
T + DV SFGV+L EL+T GA P TF+ + + + ++
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEV 267
Query: 196 --RCLNPSGKKRPAMKEVASELAGI 218
+C +P + RP+ E+ S ++ I
Sbjct: 268 MLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 88/212 (41%), Gaps = 50/212 (23%)
Query: 11 NELEKATDSFNVNRILGQGGQDIVYKGM-----------------AKVEKFINEVVIQSQ 53
++ E V + +G G VYKG +++ F NEV + +
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 54 INHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLRISIEASGTMSYL 100
H+N++ +G C + Y H E F + I+ + + M YL
Sbjct: 61 TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 120
Query: 101 HLSASVPIYHRDIKSTNILLDDKYCAKVSNFG--TSRSRAVDQTHITTQVHGTFGYLNPD 158
H + I HRD+KS NI L + K+ +FG T +SR +H Q+ G+ ++ P+
Sbjct: 121 HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW-SGSHQFEQLSGSILWMAPE 176
Query: 159 --------------DVCSFGVVLVELLTGAKP 176
DV +FG+VL EL+TG P
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 70/265 (26%)
Query: 21 NVNRILGQGGQDIVYKG----------------------MAKVEKFINEVVIQSQINHIN 58
+ N ++G+G VY G + +V +F+ E +I +H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 59 VVKLIGCCLETK--------YMHD-------QNKELPFTWEMQLRISIEASGTMSYLHLS 103
V+ L+G CL ++ YM +N+ T + + ++ + M +L
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 150
Query: 104 ASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR---SRAVDQTH-----------ITTQVH 149
AS HRD+ + N +LD+K+ KV++FG +R + D H + +
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 150 GTFGYLNPDDVCSFGVVLVELLT-GAKPI-RFTTFE------EDKNITVAKHAK------ 195
T + DV SFGV+L EL+T GA P TF+ + + + ++
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEV 270
Query: 196 --RCLNPSGKKRPAMKEVASELAGI 218
+C +P + RP+ E+ S ++ I
Sbjct: 271 MLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 70/265 (26%)
Query: 21 NVNRILGQGGQDIVYKG----------------------MAKVEKFINEVVIQSQINHIN 58
+ N ++G+G VY G + +V +F+ E +I +H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 59 VVKLIGCCLETK--------YMHD-------QNKELPFTWEMQLRISIEASGTMSYLHLS 103
V+ L+G CL ++ YM +N+ T + + ++ + M +L
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 149
Query: 104 ASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR---SRAVDQTH-----------ITTQVH 149
AS HRD+ + N +LD+K+ KV++FG +R + D H + +
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 150 GTFGYLNPDDVCSFGVVLVELLT-GAKPI-RFTTFE------EDKNITVAKHAK------ 195
T + DV SFGV+L EL+T GA P TF+ + + + ++
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEV 269
Query: 196 --RCLNPSGKKRPAMKEVASELAGI 218
+C +P + RP+ E+ S ++ I
Sbjct: 270 MLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 70/265 (26%)
Query: 21 NVNRILGQGGQDIVYKG----------------------MAKVEKFINEVVIQSQINHIN 58
+ N ++G+G VY G + +V +F+ E +I +H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 59 VVKLIGCCLETK--------YMHD-------QNKELPFTWEMQLRISIEASGTMSYLHLS 103
V+ L+G CL ++ YM +N+ T + + ++ + M +L
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 150
Query: 104 ASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR---SRAVDQTH-----------ITTQVH 149
AS HRD+ + N +LD+K+ KV++FG +R + D H + +
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 150 GTFGYLNPDDVCSFGVVLVELLT-GAKPI-RFTTFE------EDKNITVAKHAK------ 195
T + DV SFGV+L EL+T GA P TF+ + + + ++
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEV 270
Query: 196 --RCLNPSGKKRPAMKEVASELAGI 218
+C +P + RP+ E+ S ++ I
Sbjct: 271 MLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 70/265 (26%)
Query: 21 NVNRILGQGGQDIVYKG----------------------MAKVEKFINEVVIQSQINHIN 58
+ N ++G+G VY G + +V +F+ E +I +H N
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 59 VVKLIGCCLETK--------YMHD-------QNKELPFTWEMQLRISIEASGTMSYLHLS 103
V+ L+G CL ++ YM +N+ T + + ++ + M +L
Sbjct: 98 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 154
Query: 104 ASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR---SRAVDQTH-----------ITTQVH 149
AS HRD+ + N +LD+K+ KV++FG +R + D H + +
Sbjct: 155 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 214
Query: 150 GTFGYLNPDDVCSFGVVLVELLT-GAKPI-RFTTFE------EDKNITVAKHAK------ 195
T + DV SFGV+L EL+T GA P TF+ + + + ++
Sbjct: 215 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEV 274
Query: 196 --RCLNPSGKKRPAMKEVASELAGI 218
+C +P + RP+ E+ S ++ I
Sbjct: 275 MLKCWHPKAEMRPSFSELVSRISAI 299
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 103/267 (38%), Gaps = 77/267 (28%)
Query: 10 SNELEKATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEV 48
S + + A + F + R LG+G VY K KFI EV
Sbjct: 2 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 61
Query: 49 VIQSQINHINVVKLIGCCLETKYMHDQNK---------------EL----PFTWEMQLRI 89
IQS + H N+++L G Y HD + EL F +
Sbjct: 62 EIQSHLRHPNILRLYG------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 115
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
E + +SY H S + HRDIK N+LL K++NFG S + T +
Sbjct: 116 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLC 169
Query: 150 GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT-------- 189
GT YL P+ D+ S GV+ E L G P T++E K I+
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 229
Query: 190 -VAKHAK----RCLNPSGKKRPAMKEV 211
V + A+ R L + +RP ++EV
Sbjct: 230 FVTEGARDLISRLLKHNPSQRPMLREV 256
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 112/268 (41%), Gaps = 76/268 (28%)
Query: 21 NVNRILGQGGQDIVYKG----------------------MAKVEKFINEVVIQSQINHIN 58
+ N ++G+G VY G + +V +F+ E +I +H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 59 VVKLIGCCLETK--------YMHD-------QNKELPFTWEMQLRISIEASGTMSYLHLS 103
V+ L+G CL ++ YM +N+ T + + ++ + M YL
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 147
Query: 104 ASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG---------- 153
AS HRD+ + N +LD+K+ KV++FG +R D+ + + VH G
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEYYS--VHNKTGAKLPVKWMAL 204
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKPI-RFTTFE------EDKNITVAKHAK--- 195
+ DV SFGV+L EL+T GA P TF+ + + + ++
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 264
Query: 196 -----RCLNPSGKKRPAMKEVASELAGI 218
+C +P + RP+ E+ S ++ I
Sbjct: 265 YEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 103/267 (38%), Gaps = 77/267 (28%)
Query: 10 SNELEKATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEV 48
S + + A + F + R LG+G VY K KFI EV
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 49 VIQSQINHINVVKLIGCCLETKYMHDQNK---------------EL----PFTWEMQLRI 89
IQS + H N+++L G Y HD + EL F +
Sbjct: 63 EIQSHLRHPNILRLYG------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
E + +SY H S + HRDIK N+LL K++NFG S + T +
Sbjct: 117 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLC 170
Query: 150 GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT-------- 189
GT YL P+ D+ S GV+ E L G P T++E K I+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 230
Query: 190 -VAKHAK----RCLNPSGKKRPAMKEV 211
V + A+ R L + +RP ++EV
Sbjct: 231 FVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 112/268 (41%), Gaps = 76/268 (28%)
Query: 21 NVNRILGQGGQDIVYKG----------------------MAKVEKFINEVVIQSQINHIN 58
+ N ++G+G VY G + +V +F+ E +I +H N
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 59 VVKLIGCCLETK--------YMHD-------QNKELPFTWEMQLRISIEASGTMSYLHLS 103
V+ L+G CL ++ YM +N+ T + + ++ + M YL
Sbjct: 85 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 141
Query: 104 ASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG---------- 153
AS HRD+ + N +LD+K+ KV++FG +R D+ + + VH G
Sbjct: 142 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEYYS--VHNKTGAKLPVKWMAL 198
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKPI-RFTTFE------EDKNITVAKHAK--- 195
+ DV SFGV+L EL+T GA P TF+ + + + ++
Sbjct: 199 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 258
Query: 196 -----RCLNPSGKKRPAMKEVASELAGI 218
+C +P + RP+ E+ S ++ I
Sbjct: 259 YEVMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 112/268 (41%), Gaps = 76/268 (28%)
Query: 21 NVNRILGQGGQDIVYKG----------------------MAKVEKFINEVVIQSQINHIN 58
+ N ++G+G VY G + +V +F+ E +I +H N
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 59 VVKLIGCCLETK--------YMHD-------QNKELPFTWEMQLRISIEASGTMSYLHLS 103
V+ L+G CL ++ YM +N+ T + + ++ + M YL
Sbjct: 88 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 144
Query: 104 ASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG---------- 153
AS HRD+ + N +LD+K+ KV++FG +R D+ + + VH G
Sbjct: 145 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEYYS--VHNKTGAKLPVKWMAL 201
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKPI-RFTTFE------EDKNITVAKHAK--- 195
+ DV SFGV+L EL+T GA P TF+ + + + ++
Sbjct: 202 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 261
Query: 196 -----RCLNPSGKKRPAMKEVASELAGI 218
+C +P + RP+ E+ S ++ I
Sbjct: 262 YEVMLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 54/229 (23%)
Query: 38 MAKVEKFINEVVIQSQINHINVVKLIGCCLETK--------YMHD-------QNKELPFT 82
+ +V +F+ E +I +H NV+ L+G CL ++ YM +N+ T
Sbjct: 90 IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT 149
Query: 83 WEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT 142
+ + ++ + M YL AS HRD+ + N +LD+K+ KV++FG +R D+
Sbjct: 150 VKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKE 205
Query: 143 HITTQVHGTFG-----------------YLNPDDVCSFGVVLVELLT-GAKPI-RFTTFE 183
+ + VH G + DV SFGV+L EL+T GA P TF+
Sbjct: 206 YYS--VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 263
Query: 184 ------EDKNITVAKHAK--------RCLNPSGKKRPAMKEVASELAGI 218
+ + + ++ +C +P + RP+ E+ S ++ I
Sbjct: 264 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 112/268 (41%), Gaps = 76/268 (28%)
Query: 21 NVNRILGQGGQDIVYKG----------------------MAKVEKFINEVVIQSQINHIN 58
+ N ++G+G VY G + +V +F+ E +I +H N
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 59 VVKLIGCCLETK--------YMHD-------QNKELPFTWEMQLRISIEASGTMSYLHLS 103
V+ L+G CL ++ YM +N+ T + + ++ + M YL
Sbjct: 112 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 168
Query: 104 ASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG---------- 153
AS HRD+ + N +LD+K+ KV++FG +R D+ + + VH G
Sbjct: 169 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEYYS--VHNKTGAKLPVKWMAL 225
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKPI-RFTTFE------EDKNITVAKHAK--- 195
+ DV SFGV+L EL+T GA P TF+ + + + ++
Sbjct: 226 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 285
Query: 196 -----RCLNPSGKKRPAMKEVASELAGI 218
+C +P + RP+ E+ S ++ I
Sbjct: 286 YEVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 112/268 (41%), Gaps = 76/268 (28%)
Query: 21 NVNRILGQGGQDIVYKG----------------------MAKVEKFINEVVIQSQINHIN 58
+ N ++G+G VY G + +V +F+ E +I +H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 59 VVKLIGCCLETK--------YMHD-------QNKELPFTWEMQLRISIEASGTMSYLHLS 103
V+ L+G CL ++ YM +N+ T + + ++ + M YL
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 149
Query: 104 ASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG---------- 153
AS HRD+ + N +LD+K+ KV++FG +R D+ + + VH G
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEYYS--VHNKTGAKLPVKWMAL 206
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKPI-RFTTFE------EDKNITVAKHAK--- 195
+ DV SFGV+L EL+T GA P TF+ + + + ++
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 266
Query: 196 -----RCLNPSGKKRPAMKEVASELAGI 218
+C +P + RP+ E+ S ++ I
Sbjct: 267 YEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 112/268 (41%), Gaps = 76/268 (28%)
Query: 21 NVNRILGQGGQDIVYKG----------------------MAKVEKFINEVVIQSQINHIN 58
+ N ++G+G VY G + +V +F+ E +I +H N
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 59 VVKLIGCCLETK--------YMHD-------QNKELPFTWEMQLRISIEASGTMSYLHLS 103
V+ L+G CL ++ YM +N+ T + + ++ + M YL
Sbjct: 90 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 146
Query: 104 ASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG---------- 153
AS HRD+ + N +LD+K+ KV++FG +R D+ + + VH G
Sbjct: 147 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEYYS--VHNKTGAKLPVKWMAL 203
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKPI-RFTTFE------EDKNITVAKHAK--- 195
+ DV SFGV+L EL+T GA P TF+ + + + ++
Sbjct: 204 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 263
Query: 196 -----RCLNPSGKKRPAMKEVASELAGI 218
+C +P + RP+ E+ S ++ I
Sbjct: 264 YEVMLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 112/268 (41%), Gaps = 76/268 (28%)
Query: 21 NVNRILGQGGQDIVYKG----------------------MAKVEKFINEVVIQSQINHIN 58
+ N ++G+G VY G + +V +F+ E +I +H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 59 VVKLIGCCLETK--------YMHD-------QNKELPFTWEMQLRISIEASGTMSYLHLS 103
V+ L+G CL ++ YM +N+ T + + ++ + M YL
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 149
Query: 104 ASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG---------- 153
AS HRD+ + N +LD+K+ KV++FG +R D+ + + VH G
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEYYS--VHNKTGAKLPVKWMAL 206
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKPI-RFTTFE------EDKNITVAKHAK--- 195
+ DV SFGV+L EL+T GA P TF+ + + + ++
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 266
Query: 196 -----RCLNPSGKKRPAMKEVASELAGI 218
+C +P + RP+ E+ S ++ I
Sbjct: 267 YEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 112/268 (41%), Gaps = 76/268 (28%)
Query: 21 NVNRILGQGGQDIVYKG----------------------MAKVEKFINEVVIQSQINHIN 58
+ N ++G+G VY G + +V +F+ E +I +H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 59 VVKLIGCCLETK--------YMHD-------QNKELPFTWEMQLRISIEASGTMSYLHLS 103
V+ L+G CL ++ YM +N+ T + + ++ + M YL
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 148
Query: 104 ASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG---------- 153
AS HRD+ + N +LD+K+ KV++FG +R D+ + + VH G
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEYYS--VHNKTGAKLPVKWMAL 205
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKPI-RFTTFE------EDKNITVAKHAK--- 195
+ DV SFGV+L EL+T GA P TF+ + + + ++
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 265
Query: 196 -----RCLNPSGKKRPAMKEVASELAGI 218
+C +P + RP+ E+ S ++ I
Sbjct: 266 YEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 101/261 (38%), Gaps = 77/261 (29%)
Query: 16 ATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEVVIQSQI 54
A + F + R LG+G VY K KFI EV IQS +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 55 NHINVVKLIGCCLETKYMHDQNK---------------EL----PFTWEMQLRISIEASG 95
H N+++L G Y HD + EL F + E +
Sbjct: 66 RHPNILRLYG------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYL 155
+SY H S + HRDIK N+LL K+++FG S + T++ GT YL
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTELCGTLDYL 173
Query: 156 NPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT---------VAKHA 194
P+ D+ S GV+ E L G P T++E K I+ V + A
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 195 K----RCLNPSGKKRPAMKEV 211
+ R L + +RP ++EV
Sbjct: 234 RDLISRLLKHNPSQRPMLREV 254
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 103/267 (38%), Gaps = 77/267 (28%)
Query: 10 SNELEKATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEV 48
S + + A + F + R LG+G VY K KFI EV
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 49 VIQSQINHINVVKLIGCCLETKYMHDQN---------------KEL----PFTWEMQLRI 89
IQS + H N+++L G Y HD KEL F +
Sbjct: 65 EIQSHLRHPNILRLYG------YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY 118
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
E + +SY H S + HRDIK N+LL K+++FG S + T +
Sbjct: 119 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLC 172
Query: 150 GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT-------- 189
GT YL P+ D+ S GV+ E L G P T++E K I+
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 232
Query: 190 -VAKHAK----RCLNPSGKKRPAMKEV 211
V + A+ R L + +RP ++EV
Sbjct: 233 FVTEGARDLISRLLKHNPSQRPMLREV 259
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 104/268 (38%), Gaps = 77/268 (28%)
Query: 9 ISNELEKATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NE 47
+S + + A + F + R LG+G VY K KFI E
Sbjct: 4 MSKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 48 VVIQSQINHINVVKLIGCCLETKYMHDQNK---------------EL----PFTWEMQLR 88
V IQS + H N+++L G Y HD + EL F +
Sbjct: 64 VEIQSHLRHPNILRLYG------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT 117
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQV 148
E + +SY H S + HRDIK N+LL K+++FG S + T +
Sbjct: 118 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDL 171
Query: 149 HGTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT------- 189
GT YL P+ D+ S GV+ E L G P T++E K I+
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 231
Query: 190 --VAKHAK----RCLNPSGKKRPAMKEV 211
V + A+ R L + +RP ++EV
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPMLREV 259
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 54/229 (23%)
Query: 38 MAKVEKFINEVVIQSQINHINVVKLIGCCLETK--------YMHD-------QNKELPFT 82
+ +V +F+ E +I +H NV+ L+G CL ++ YM +N+ T
Sbjct: 71 IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT 130
Query: 83 WEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT 142
+ + ++ + M YL AS HRD+ + N +LD+K+ KV++FG +R +
Sbjct: 131 VKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE- 186
Query: 143 HITTQVHGTFG-----------------YLNPDDVCSFGVVLVELLT-GAKPI-RFTTFE 183
VH G + DV SFGV+L EL+T GA P TF+
Sbjct: 187 --XXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 244
Query: 184 ------EDKNITVAKHAK--------RCLNPSGKKRPAMKEVASELAGI 218
+ + + ++ +C +P + RP+ E+ S ++ I
Sbjct: 245 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 100/261 (38%), Gaps = 77/261 (29%)
Query: 16 ATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEVVIQSQI 54
A + F + R LG+G VY K KFI EV IQS +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 55 NHINVVKLIGCCLETKYMHDQNK---------------EL----PFTWEMQLRISIEASG 95
H N+++L G Y HD + EL F + E +
Sbjct: 92 RHPNILRLYG------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 145
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYL 155
+SY H S + HRDIK N+LL K+++FG S + T + GT YL
Sbjct: 146 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYL 199
Query: 156 NPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT---------VAKHA 194
P+ D+ S GV+ E L G P T++E K I+ V + A
Sbjct: 200 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 259
Query: 195 K----RCLNPSGKKRPAMKEV 211
+ R L + +RP ++EV
Sbjct: 260 RDLISRLLKHNPSQRPMLREV 280
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 100/261 (38%), Gaps = 77/261 (29%)
Query: 16 ATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEVVIQSQI 54
A + F + R LG+G VY K KFI EV IQS +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 55 NHINVVKLIGCCLETKYMHDQNK---------------EL----PFTWEMQLRISIEASG 95
H N+++L G Y HD + EL F + E +
Sbjct: 67 RHPNILRLYG------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 120
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYL 155
+SY H S + HRDIK N+LL K+++FG S + T + GT YL
Sbjct: 121 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR---RTTLSGTLDYL 174
Query: 156 NPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT---------VAKHA 194
P+ D+ S GV+ E L G P T++E K I+ V + A
Sbjct: 175 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 234
Query: 195 K----RCLNPSGKKRPAMKEV 211
+ R L + +RP ++EV
Sbjct: 235 RDLISRLLKHNPSQRPMLREV 255
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 103/267 (38%), Gaps = 77/267 (28%)
Query: 10 SNELEKATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEV 48
S + + A + F + R LG+G VY K KFI EV
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 49 VIQSQINHINVVKLIGCCLETKYMHDQNK---------------EL----PFTWEMQLRI 89
IQS + H N+++L G Y HD + EL F +
Sbjct: 61 EIQSHLRHPNILRLYG------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 114
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
E + +SY H S + HRDIK N+LL K+++FG S + T +
Sbjct: 115 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLC 168
Query: 150 GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT-------- 189
GT YL P+ D+ S GV+ E L G P T++E K I+
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 228
Query: 190 -VAKHAK----RCLNPSGKKRPAMKEV 211
V + A+ R L + +RP ++EV
Sbjct: 229 FVTEGARDLISRLLKHNPSQRPMLREV 255
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 103/267 (38%), Gaps = 77/267 (28%)
Query: 10 SNELEKATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEV 48
S + + A + F + R LG+G VY K KFI EV
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 49 VIQSQINHINVVKLIGCCLETKYMHDQNK---------------EL----PFTWEMQLRI 89
IQS + H N+++L G Y HD + EL F +
Sbjct: 65 EIQSHLRHPNILRLYG------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 118
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
E + +SY H S + HRDIK N+LL K+++FG S + T +
Sbjct: 119 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLC 172
Query: 150 GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT-------- 189
GT YL P+ D+ S GV+ E L G P T++E K I+
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 232
Query: 190 -VAKHAK----RCLNPSGKKRPAMKEV 211
V + A+ R L + +RP ++EV
Sbjct: 233 FVTEGARDLISRLLKHNPSQRPMLREV 259
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 103/267 (38%), Gaps = 77/267 (28%)
Query: 10 SNELEKATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEV 48
S + + A + F + R LG+G VY K KFI EV
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 49 VIQSQINHINVVKLIGCCLETKYMHDQNK---------------EL----PFTWEMQLRI 89
IQS + H N+++L G Y HD + EL F +
Sbjct: 65 EIQSHLRHPNILRLYG------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 118
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
E + +SY H S + HRDIK N+LL K+++FG S + T +
Sbjct: 119 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLC 172
Query: 150 GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT-------- 189
GT YL P+ D+ S GV+ E L G P T++E K I+
Sbjct: 173 GTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 232
Query: 190 -VAKHAK----RCLNPSGKKRPAMKEV 211
V + A+ R L + +RP ++EV
Sbjct: 233 FVTEGARDLISRLLKHNPSQRPXLREV 259
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 102/267 (38%), Gaps = 77/267 (28%)
Query: 10 SNELEKATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEV 48
S + + A + F + R LG+G VY K KFI EV
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 49 VIQSQINHINVVKLIGCCLETKYMHDQN---------------KEL----PFTWEMQLRI 89
IQS + H N+++L G Y HD KEL F +
Sbjct: 65 EIQSHLRHPNILRLYG------YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY 118
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
E + +SY H S + HRDIK N+LL K+++FG S + +
Sbjct: 119 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLX 172
Query: 150 GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT-------- 189
GT YL P+ D+ S GV+ E L G P T++E K I+
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 232
Query: 190 -VAKHAK----RCLNPSGKKRPAMKEV 211
V + A+ R L + +RP ++EV
Sbjct: 233 FVTEGARDLISRLLKHNPSQRPMLREV 259
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 103/267 (38%), Gaps = 77/267 (28%)
Query: 10 SNELEKATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEV 48
S + + A + F + R LG+G VY K KFI EV
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 49 VIQSQINHINVVKLIGCCLETKYMHDQNK---------------EL----PFTWEMQLRI 89
IQS + H N+++L G Y HD + EL F +
Sbjct: 63 EIQSHLRHPNILRLYG------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
E + +SY H S + HRDIK N+LL K+++FG S + T +
Sbjct: 117 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLC 170
Query: 150 GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT-------- 189
GT YL P+ D+ S GV+ E L G P T++E K I+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 230
Query: 190 -VAKHAK----RCLNPSGKKRPAMKEV 211
V + A+ R L + +RP ++EV
Sbjct: 231 FVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 100/261 (38%), Gaps = 77/261 (29%)
Query: 16 ATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEVVIQSQI 54
A + F + R LG+G VY K KFI EV IQS +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 55 NHINVVKLIGCCLETKYMHDQNK---------------EL----PFTWEMQLRISIEASG 95
H N+++L G Y HD + EL F + E +
Sbjct: 83 RHPNILRLYG------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 136
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYL 155
+SY H S + HRDIK N+LL K+++FG S + T + GT YL
Sbjct: 137 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYL 190
Query: 156 NPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT---------VAKHA 194
P+ D+ S GV+ E L G P T++E K I+ V + A
Sbjct: 191 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 250
Query: 195 K----RCLNPSGKKRPAMKEV 211
+ R L + +RP ++EV
Sbjct: 251 RDLISRLLKHNPSQRPMLREV 271
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 100/261 (38%), Gaps = 77/261 (29%)
Query: 16 ATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEVVIQSQI 54
A + F + R LG+G VY K KFI EV IQS +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 55 NHINVVKLIGCCLETKYMHDQNK---------------EL----PFTWEMQLRISIEASG 95
H N+++L G Y HD + EL F + E +
Sbjct: 66 RHPNILRLYG------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYL 155
+SY H S + HRDIK N+LL K+++FG S + T + GT YL
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYL 173
Query: 156 NPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT---------VAKHA 194
P+ D+ S GV+ E L G P T++E K I+ V + A
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 195 K----RCLNPSGKKRPAMKEV 211
+ R L + +RP ++EV
Sbjct: 234 RDLISRLLKHNPSQRPMLREV 254
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 100/261 (38%), Gaps = 77/261 (29%)
Query: 16 ATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEVVIQSQI 54
A + F + R LG+G VY K KFI EV IQS +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 55 NHINVVKLIGCCLETKYMHDQNK---------------EL----PFTWEMQLRISIEASG 95
H N+++L G Y HD + EL F + E +
Sbjct: 66 RHPNILRLYG------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYL 155
+SY H S + HRDIK N+LL K+++FG S + T + GT YL
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYL 173
Query: 156 NPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT---------VAKHA 194
P+ D+ S GV+ E L G P T++E K I+ V + A
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 195 K----RCLNPSGKKRPAMKEV 211
+ R L + +RP ++EV
Sbjct: 234 RDLISRLLKHNPSQRPMLREV 254
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 100/261 (38%), Gaps = 77/261 (29%)
Query: 16 ATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEVVIQSQI 54
A + F + R LG+G VY K KFI EV IQS +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 55 NHINVVKLIGCCLETKYMHDQNK---------------EL----PFTWEMQLRISIEASG 95
H N+++L G Y HD + EL F + E +
Sbjct: 66 RHPNILRLYG------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYL 155
+SY H S + HRDIK N+LL K+++FG S + T + GT YL
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYL 173
Query: 156 NPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT---------VAKHA 194
P+ D+ S GV+ E L G P T++E K I+ V + A
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 195 K----RCLNPSGKKRPAMKEV 211
+ R L + +RP ++EV
Sbjct: 234 RDLISRLLKHNPSQRPMLREV 254
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 100/261 (38%), Gaps = 77/261 (29%)
Query: 16 ATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEVVIQSQI 54
A + F + R LG+G VY K KFI EV IQS +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 55 NHINVVKLIGCCLETKYMHDQNK---------------EL----PFTWEMQLRISIEASG 95
H N+++L G Y HD + EL F + E +
Sbjct: 70 RHPNILRLYG------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 123
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYL 155
+SY H S + HRDIK N+LL K+++FG S + T + GT YL
Sbjct: 124 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYL 177
Query: 156 NPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT---------VAKHA 194
P+ D+ S GV+ E L G P T++E K I+ V + A
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 237
Query: 195 K----RCLNPSGKKRPAMKEV 211
+ R L + +RP ++EV
Sbjct: 238 RDLISRLLKHNPSQRPMLREV 258
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 100/261 (38%), Gaps = 77/261 (29%)
Query: 16 ATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEVVIQSQI 54
A + F + R LG+G VY K KFI EV IQS +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 55 NHINVVKLIGCCLETKYMHDQNK---------------EL----PFTWEMQLRISIEASG 95
H N+++L G Y HD + EL F + E +
Sbjct: 66 RHPNILRLYG------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYL 155
+SY H S + HRDIK N+LL K+++FG S + T + GT YL
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTXLCGTLDYL 173
Query: 156 NPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT---------VAKHA 194
P+ D+ S GV+ E L G P T++E K I+ V + A
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 195 K----RCLNPSGKKRPAMKEV 211
+ R L + +RP ++EV
Sbjct: 234 RDLISRLLKHNPSQRPMLREV 254
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 103/267 (38%), Gaps = 77/267 (28%)
Query: 10 SNELEKATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEV 48
S + + A + F + R LG+G VY K KFI EV
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 49 VIQSQINHINVVKLIGCCLETKYMHDQNK---------------EL----PFTWEMQLRI 89
IQS + H N+++L G Y HD + EL F +
Sbjct: 63 EIQSHLRHPNILRLYG------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
E + +SY H S + HRDIK N+LL K+++FG S + T +
Sbjct: 117 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLC 170
Query: 150 GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT-------- 189
GT YL P+ D+ S GV+ E L G P T++E K I+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 230
Query: 190 -VAKHAK----RCLNPSGKKRPAMKEV 211
V + A+ R L + +RP ++EV
Sbjct: 231 FVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 100/261 (38%), Gaps = 77/261 (29%)
Query: 16 ATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEVVIQSQI 54
A + F + R LG+G VY K KFI EV IQS +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 55 NHINVVKLIGCCLETKYMHDQNK---------------EL----PFTWEMQLRISIEASG 95
H N+++L G Y HD + EL F + E +
Sbjct: 65 RHPNILRLYG------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 118
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYL 155
+SY H S + HRDIK N+LL K+++FG S + T + GT YL
Sbjct: 119 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYL 172
Query: 156 NPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT---------VAKHA 194
P+ D+ S GV+ E L G P T++E K I+ V + A
Sbjct: 173 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 232
Query: 195 K----RCLNPSGKKRPAMKEV 211
+ R L + +RP ++EV
Sbjct: 233 RDLISRLLKHNPSQRPMLREV 253
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 100/261 (38%), Gaps = 77/261 (29%)
Query: 16 ATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEVVIQSQI 54
A + F + R LG+G VY K KFI EV IQS +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 55 NHINVVKLIGCCLETKYMHDQNK---------------EL----PFTWEMQLRISIEASG 95
H N+++L G Y HD + EL F + E +
Sbjct: 63 RHPNILRLYG------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 116
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYL 155
+SY H S + HRDIK N+LL K+++FG S + T + GT YL
Sbjct: 117 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYL 170
Query: 156 NPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT---------VAKHA 194
P+ D+ S GV+ E L G P T++E K I+ V + A
Sbjct: 171 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 230
Query: 195 K----RCLNPSGKKRPAMKEV 211
+ R L + +RP ++EV
Sbjct: 231 RDLISRLLKHNPSQRPMLREV 251
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 101/265 (38%), Gaps = 85/265 (32%)
Query: 16 ATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEVVIQSQI 54
A + F + R LG+G VY K KFI EV IQS +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 55 NHINVVKLIGCCLETKYMHDQNK---------------EL----PFTWEMQLRISIEASG 95
H N+++L G Y HD + EL F + E +
Sbjct: 92 RHPNILRLYG------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 145
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTS----RSRAVDQTHITTQVHGT 151
+SY H S + HRDIK N+LL K+++FG S SR D + GT
Sbjct: 146 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD-------LCGT 195
Query: 152 FGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT---------V 190
YL P+ D+ S GV+ E L G P T++E K I+ V
Sbjct: 196 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 255
Query: 191 AKHAK----RCLNPSGKKRPAMKEV 211
+ A+ R L + +RP ++EV
Sbjct: 256 TEGARDLISRLLKHNPSQRPMLREV 280
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 33/166 (19%)
Query: 40 KVEKFINEVVIQSQINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQ 86
+ + F NEV + + H+N++ +G C + Y H +E F
Sbjct: 75 QFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQL 134
Query: 87 LRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFG--TSRSRAVDQTHI 144
+ I+ + + M YLH I HRD+KS NI L + K+ +FG T +SR +
Sbjct: 135 IDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV 191
Query: 145 TTQVHGTFGYLNPD--------------DVCSFGVVLVELLTGAKP 176
Q G+ ++ P+ DV S+G+VL EL+TG P
Sbjct: 192 -EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 99/261 (37%), Gaps = 77/261 (29%)
Query: 16 ATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEVVIQSQI 54
A + F + R LG+G VY K KFI EV IQS +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 55 NHINVVKLIGCCLETKYMHDQNK---------------EL----PFTWEMQLRISIEASG 95
H N+++L G Y HD + EL F + E +
Sbjct: 69 RHPNILRLYG------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYL 155
+SY H S + HRDIK N+LL K+++FG S + + GT YL
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYL 176
Query: 156 NPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT---------VAKHA 194
P+ D+ S GV+ E L G P T++E K I+ V + A
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236
Query: 195 K----RCLNPSGKKRPAMKEV 211
+ R L + +RP ++EV
Sbjct: 237 RDLISRLLKHNPSQRPMLREV 257
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 101/259 (38%), Gaps = 73/259 (28%)
Query: 16 ATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEVVIQSQI 54
A + F + R LG+G VY K KFI EV IQS +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 55 NHINVVKLIG---------CCLETKYMHDQNKEL----PFTWEMQLRISIEASGTMSYLH 101
H N+++L G LE + +EL F + E + +SY H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 102 LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTS----RSRAVDQTHITTQVHGTFGYLNP 157
S + HRDIK N+LL K+++FG S SR D + GT YL P
Sbjct: 129 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD-------LCGTLDYLPP 178
Query: 158 D-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT---------VAKHAK- 195
+ D+ S GV+ E L G P T++E K I+ V + A+
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 238
Query: 196 ---RCLNPSGKKRPAMKEV 211
R L + +RP ++EV
Sbjct: 239 LISRLLKHNPSQRPMLREV 257
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 102/267 (38%), Gaps = 77/267 (28%)
Query: 10 SNELEKATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEV 48
S + + A + F + R LG+G VY K KFI EV
Sbjct: 2 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 61
Query: 49 VIQSQINHINVVKLIGCCLETKYMHDQNK---------------EL----PFTWEMQLRI 89
IQS + H N+++L G Y HD + EL F +
Sbjct: 62 EIQSHLRHPNILRLYG------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 115
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
E + +SY H S + HRDIK N+LL K+++FG S + +
Sbjct: 116 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLC 169
Query: 150 GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT-------- 189
GT YL P+ D+ S GV+ E L G P T++E K I+
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 229
Query: 190 -VAKHAK----RCLNPSGKKRPAMKEV 211
V + A+ R L + +RP ++EV
Sbjct: 230 FVTEGARDLISRLLKHNPSQRPMLREV 256
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 99/261 (37%), Gaps = 77/261 (29%)
Query: 16 ATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEVVIQSQI 54
A + F + R LG+G VY K KFI EV IQS +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 55 NHINVVKLIGCCLETKYMHDQNK---------------EL----PFTWEMQLRISIEASG 95
H N+++L G Y HD + EL F + E +
Sbjct: 66 RHPNILRLYG------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYL 155
+SY H S + HRDIK N+LL K+++FG S + + GT YL
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYL 173
Query: 156 NPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT---------VAKHA 194
P+ D+ S GV+ E L G P T++E K I+ V + A
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 195 K----RCLNPSGKKRPAMKEV 211
+ R L + +RP ++EV
Sbjct: 234 RDLISRLLKHNPSQRPMLREV 254
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 29/163 (17%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCC--------LETKYMHDQNKELPFTWEMQLRISIE- 92
++ + E + Q+++ +V++IG C +E + NK L ++ + IE
Sbjct: 415 DELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 474
Query: 93 ---ASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
S M YL S V HRD+ + N+LL ++ AK+S+FG S++ D+ + Q H
Sbjct: 475 VHQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 531
Query: 150 GT-------------FGYLNPDDVCSFGVVLVELLT-GAKPIR 178
G + + + DV SFGV++ E + G KP R
Sbjct: 532 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 574
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 99/261 (37%), Gaps = 77/261 (29%)
Query: 16 ATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEVVIQSQI 54
A + F + R LG+G VY K KFI EV IQS +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 55 NHINVVKLIGCCLETKYMHDQNK---------------EL----PFTWEMQLRISIEASG 95
H N+++L G Y HD + EL F + E +
Sbjct: 66 RHPNILRLYG------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYL 155
+SY H S + HRDIK N+LL K+++FG S + + GT YL
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTLDYL 173
Query: 156 NPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT---------VAKHA 194
P+ D+ S GV+ E L G P T++E K I+ V + A
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 195 K----RCLNPSGKKRPAMKEV 211
+ R L + +RP ++EV
Sbjct: 234 RDLISRLLKHNPSQRPMLREV 254
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 101/267 (37%), Gaps = 77/267 (28%)
Query: 10 SNELEKATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEV 48
S + + A + F + R LG+G VY K KFI EV
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 49 VIQSQINHINVVKLIGCCLETKYMHDQNK---------------EL----PFTWEMQLRI 89
IQS + H N+++L G Y HD + EL F +
Sbjct: 61 EIQSHLRHPNILRLYG------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 114
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
E + +SY H S + HRDIK N+LL K+++FG S +
Sbjct: 115 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLC--- 168
Query: 150 GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT-------- 189
GT YL P+ D+ S GV+ E L G P T++E K I+
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 228
Query: 190 -VAKHAK----RCLNPSGKKRPAMKEV 211
V + A+ R L + +RP ++EV
Sbjct: 229 FVTEGARDLISRLLKHNPSQRPMLREV 255
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 29/163 (17%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCC--------LETKYMHDQNKELPFTWEMQLRISIE- 92
++ + E + Q+++ +V++IG C +E + NK L ++ + IE
Sbjct: 416 DELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 475
Query: 93 ---ASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
S M YL S V HRD+ + N+LL ++ AK+S+FG S++ D+ + Q H
Sbjct: 476 VHQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 532
Query: 150 GT-------------FGYLNPDDVCSFGVVLVELLT-GAKPIR 178
G + + + DV SFGV++ E + G KP R
Sbjct: 533 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 575
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 102/267 (38%), Gaps = 77/267 (28%)
Query: 10 SNELEKATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEV 48
S + + A + F + R LG+G VY K KFI EV
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 49 VIQSQINHINVVKLIGCCLETKYMHDQNK---------------EL----PFTWEMQLRI 89
IQS + H N+++L G Y HD + EL F +
Sbjct: 63 EIQSHLRHPNILRLYG------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
E + +SY H S + HRDIK N+LL K+++FG S + +
Sbjct: 117 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLC 170
Query: 150 GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT-------- 189
GT YL P+ D+ S GV+ E L G P T++E K I+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 230
Query: 190 -VAKHAK----RCLNPSGKKRPAMKEV 211
V + A+ R L + +RP ++EV
Sbjct: 231 FVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 29/163 (17%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCC--------LETKYMHDQNKELPFTWEMQLRISIE- 92
++ + E + Q+++ +V++IG C +E + NK L ++ + IE
Sbjct: 71 DELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 130
Query: 93 ---ASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
S M YL S V HRD+ + N+LL ++ AK+S+FG S++ D+ + Q H
Sbjct: 131 VHQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 187
Query: 150 GT-------------FGYLNPDDVCSFGVVLVELLT-GAKPIR 178
G + + + DV SFGV++ E + G KP R
Sbjct: 188 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 230
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 102/250 (40%), Gaps = 63/250 (25%)
Query: 20 FNVNRILGQGGQDIVYKGMAKVEK--------------FINEVVIQSQINHINVVKLIGC 65
V ++G+G +V K + + FI E+ S++NH N+VKL G
Sbjct: 11 IEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGA 70
Query: 66 CLETKYMHDQNKE-------------LP-FTWEMQLRISIEASGTMSYLHLSASVPIYHR 111
CL + + E LP +T + ++ S ++YLH + HR
Sbjct: 71 CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 130
Query: 112 DIKSTNILL-DDKYCAKVSNFGTSRSRAVD-QTHITTQVHGTFGYLNPD----------- 158
D+K N+LL K+ +FGT A D QTH+T G+ ++ P+
Sbjct: 131 DLKPPNLLLVAGGTVLKICDFGT----ACDIQTHMTNN-KGSAAWMAPEVFEGSNYSEKC 185
Query: 159 DVCSFGVVLVELLTGAKPI------RFTTFEEDKNIT-----------VAKHAKRCLNPS 201
DV S+G++L E++T KP F N T + RC +
Sbjct: 186 DVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKD 245
Query: 202 GKKRPAMKEV 211
+RP+M+E+
Sbjct: 246 PSQRPSMEEI 255
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 29/163 (17%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCC--------LETKYMHDQNKELPFTWEMQLRISIE- 92
++ + E + Q+++ +V++IG C +E + NK L ++ + IE
Sbjct: 63 DELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 122
Query: 93 ---ASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
S M YL S V HRD+ + N+LL ++ AK+S+FG S++ D+ + Q H
Sbjct: 123 VHQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 179
Query: 150 GT-------------FGYLNPDDVCSFGVVLVELLT-GAKPIR 178
G + + + DV SFGV++ E + G KP R
Sbjct: 180 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 222
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 29/163 (17%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCC--------LETKYMHDQNKELPFTWEMQLRISIE- 92
++ + E + Q+++ +V++IG C +E + NK L ++ + IE
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 132
Query: 93 ---ASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
S M YL S V HRD+ + N+LL ++ AK+S+FG S++ D+ + Q H
Sbjct: 133 VHQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 189
Query: 150 GT-------------FGYLNPDDVCSFGVVLVELLT-GAKPIR 178
G + + + DV SFGV++ E + G KP R
Sbjct: 190 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 232
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 29/163 (17%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCC--------LETKYMHDQNKELPFTWEMQLRISIE- 92
++ + E + Q+++ +V++IG C +E + NK L ++ + IE
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 132
Query: 93 ---ASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
S M YL S V HRD+ + N+LL ++ AK+S+FG S++ D+ + Q H
Sbjct: 133 VHQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 189
Query: 150 GT-------------FGYLNPDDVCSFGVVLVELLT-GAKPIR 178
G + + + DV SFGV++ E + G KP R
Sbjct: 190 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 232
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 29/163 (17%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCC--------LETKYMHDQNKELPFTWEMQLRISIE- 92
++ + E + Q+++ +V++IG C +E + NK L ++ + IE
Sbjct: 51 DELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 110
Query: 93 ---ASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
S M YL S V HRD+ + N+LL ++ AK+S+FG S++ D+ + Q H
Sbjct: 111 VHQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 167
Query: 150 GT-------------FGYLNPDDVCSFGVVLVELLT-GAKPIR 178
G + + + DV SFGV++ E + G KP R
Sbjct: 168 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 210
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 102/250 (40%), Gaps = 63/250 (25%)
Query: 20 FNVNRILGQGGQDIVYKGMAKVEK--------------FINEVVIQSQINHINVVKLIGC 65
V ++G+G +V K + + FI E+ S++NH N+VKL G
Sbjct: 10 IEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGA 69
Query: 66 CLETKYMHDQNKE-------------LP-FTWEMQLRISIEASGTMSYLHLSASVPIYHR 111
CL + + E LP +T + ++ S ++YLH + HR
Sbjct: 70 CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 129
Query: 112 DIKSTNILL-DDKYCAKVSNFGTSRSRAVD-QTHITTQVHGTFGYLNPD----------- 158
D+K N+LL K+ +FGT A D QTH+T G+ ++ P+
Sbjct: 130 DLKPPNLLLVAGGTVLKICDFGT----ACDIQTHMTNN-KGSAAWMAPEVFEGSNYSEKC 184
Query: 159 DVCSFGVVLVELLTGAKPI------RFTTFEEDKNIT-----------VAKHAKRCLNPS 201
DV S+G++L E++T KP F N T + RC +
Sbjct: 185 DVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKD 244
Query: 202 GKKRPAMKEV 211
+RP+M+E+
Sbjct: 245 PSQRPSMEEI 254
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 29/163 (17%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCC--------LETKYMHDQNKELPFTWEMQLRISIE- 92
++ + E + Q+++ +V++IG C +E + NK L ++ + IE
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 116
Query: 93 ---ASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
S M YL S V HRD+ + N+LL ++ AK+S+FG S++ D+ + Q H
Sbjct: 117 VHQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 173
Query: 150 GT-------------FGYLNPDDVCSFGVVLVELLT-GAKPIR 178
G + + + DV SFGV++ E + G KP R
Sbjct: 174 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 216
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 29/163 (17%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCC--------LETKYMHDQNKELPFTWEMQLRISIE- 92
++ + E + Q+++ +V++IG C +E + NK L ++ + IE
Sbjct: 53 DELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 112
Query: 93 ---ASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
S M YL S V HRD+ + N+LL ++ AK+S+FG S++ D+ + Q H
Sbjct: 113 VHQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 169
Query: 150 GT-------------FGYLNPDDVCSFGVVLVELLT-GAKPIR 178
G + + + DV SFGV++ E + G KP R
Sbjct: 170 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 212
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 99/261 (37%), Gaps = 77/261 (29%)
Query: 16 ATDSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEVVIQSQI 54
A + F + R LG+G VY K KFI EV IQS +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 55 NHINVVKLIGCCLETKYMHDQNK---------------EL----PFTWEMQLRISIEASG 95
H N+++L G Y HD + EL F + E +
Sbjct: 66 RHPNILRLYG------YFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYL 155
+SY H S + HRDIK N+LL K+++FG S + + GT YL
Sbjct: 120 ALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYL 173
Query: 156 NPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNIT---------VAKHA 194
P+ D+ S GV+ E L G P T+++ K I+ V + A
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGA 233
Query: 195 K----RCLNPSGKKRPAMKEV 211
+ R L + +RP ++EV
Sbjct: 234 RDLISRLLKHNPSQRPMLREV 254
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 83/218 (38%), Gaps = 63/218 (28%)
Query: 18 DSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEVVIQSQINH 56
+ F++ R LG+G VY + KFI EV IQS + H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 57 INVVKLIGCCLETKYMHDQNK---------------ELP----FTWEMQLRISIEASGTM 97
N+++L G Y HD + EL F + E + +
Sbjct: 72 PNILRLYG------YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANAL 125
Query: 98 SYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNP 157
SY H S + HRDIK N+LL K+++FG S + T + GT YL P
Sbjct: 126 SYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---RTTLCGTLDYLPP 179
Query: 158 D-----------DVCSFGVVLVELLTGAKPIRFTTFEE 184
+ D+ S GV+ E L G P T++E
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQE 217
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 94/230 (40%), Gaps = 48/230 (20%)
Query: 34 VYKGMAKVEKFINEVVIQSQINHINVVKLIGCCLE----------------TKYMHDQNK 77
+ +G E FI E + +++H +V+L G CLE + Y+ Q
Sbjct: 39 IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG 98
Query: 78 ELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSR 137
F E L + ++ M+YL ++ + HRD+ + N L+ + KVS+FG +R
Sbjct: 99 --LFAAETLLGMCLDVCEGMAYLEEAS---VIHRDLAARNCLVGENQVIKVSDFGMTRFV 153
Query: 138 AVDQTHITT-----------QVHGTFGYLNPDDVCSFGVVLVELLTGAK-PIR------- 178
DQ +T +V Y + DV SFGV++ E+ + K P
Sbjct: 154 LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 213
Query: 179 ----FTTFEEDKNITVAKHAKRCLNPSGKK----RPAMKEVASELAGIKA 220
T F K + H + +N K+ RPA + +LA I A
Sbjct: 214 VEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAAIAA 263
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 29/163 (17%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCC--------LETKYMHDQNKELPFTWEMQLRISIE- 92
++ + E + Q+++ +V++IG C +E + NK L ++ + IE
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 116
Query: 93 ---ASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
S M YL S V HRD+ + N+LL ++ AK+S+FG S++ D+ Q H
Sbjct: 117 VHQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTH 173
Query: 150 GT-------------FGYLNPDDVCSFGVVLVELLT-GAKPIR 178
G + + + DV SFGV++ E + G KP R
Sbjct: 174 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 216
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 40/184 (21%)
Query: 24 RILGQGGQDIVYKGMAKVEKFINEVVIQSQINHINVVKLIGCC--------LET------ 69
++L QG + A E+ + E I Q+++ +V+LIG C +E
Sbjct: 43 KVLKQGTEK------ADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPL 96
Query: 70 -KYMHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKV 128
K++ + +E+P + +L + S M YL V HRD+ + N+LL +++ AK+
Sbjct: 97 HKFLVGKREEIPVSNVAELLHQV--SMGMKYLEEKNFV---HRDLAARNVLLVNRHYAKI 151
Query: 129 SNFGTSRSRAVDQTHITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLT-GA 174
S+FG S++ D ++ T + G + + P+ DV S+GV + E L+ G
Sbjct: 152 SDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ 211
Query: 175 KPIR 178
KP +
Sbjct: 212 KPYK 215
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 28/167 (16%)
Query: 34 VYKGMAKVEKFINEVVIQSQINHINVVKLIGCCLE-------TKYM-------HDQNKEL 79
+ +G E FI E + +++H +V+L G CLE T++M + + +
Sbjct: 40 IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRG 99
Query: 80 PFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAV 139
F E L + ++ M+YL + + HRD+ + N L+ + KVS+FG +R
Sbjct: 100 LFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 156
Query: 140 DQTHITT-----------QVHGTFGYLNPDDVCSFGVVLVELLTGAK 175
DQ +T +V Y + DV SFGV++ E+ + K
Sbjct: 157 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 203
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 81/218 (37%), Gaps = 63/218 (28%)
Query: 18 DSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEVVIQSQINH 56
+ F++ R LG+G VY + KFI EV IQS + H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 57 INVVKLIGCCLETKYMHDQNK---------------ELP----FTWEMQLRISIEASGTM 97
N+++L G Y HD + EL F + E + +
Sbjct: 72 PNILRLYG------YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANAL 125
Query: 98 SYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNP 157
SY H S + HRDIK N+LL K+++FG S + GT YL P
Sbjct: 126 SYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC---GTLDYLPP 179
Query: 158 D-----------DVCSFGVVLVELLTGAKPIRFTTFEE 184
+ D+ S GV+ E L G P T++E
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQE 217
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 21/158 (13%)
Query: 71 YMHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSN 130
+ H +E E+Q+ + E + +LH + I +RDIK NILLD +++
Sbjct: 147 FTHLSQRERFTEHEVQIYVG-EIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTD 202
Query: 131 FGTSRSRAVDQTHITTQVHGTFGYLNPD-------------DVCSFGVVLVELLTGAKPI 177
FG S+ D+T GT Y+ PD D S GV++ ELLTGA P
Sbjct: 203 FGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
Query: 178 RFTTFEEDKNITVAKHAKRCLNPSGKKRPAMKEVASEL 215
T + +KN + A+ ++R L M +A +L
Sbjct: 263 ---TVDGEKN-SQAEISRRILKSEPPYPQEMSALAKDL 296
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 89/221 (40%), Gaps = 44/221 (19%)
Query: 34 VYKGMAKVEKFINEVVIQSQINHINVVKLIGCCLE----------------TKYMHDQNK 77
+ +G E FI E + +++H +V+L G CLE + Y+ Q
Sbjct: 39 IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG 98
Query: 78 ELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSR 137
F E L + ++ M+YL + + HRD+ + N L+ + KVS+FG +R
Sbjct: 99 --LFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV 153
Query: 138 AVDQTHITT-----------QVHGTFGYLNPDDVCSFGVVLVELLTGAK-PIR------- 178
DQ +T +V Y + DV SFGV++ E+ + K P
Sbjct: 154 LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 213
Query: 179 ----FTTFEEDKNITVAKHAKRCLNPSGKKRPAMKEVASEL 215
T F K + H + +N K+RP + S L
Sbjct: 214 VEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRL 254
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 89/221 (40%), Gaps = 44/221 (19%)
Query: 34 VYKGMAKVEKFINEVVIQSQINHINVVKLIGCCLE----------------TKYMHDQNK 77
+ +G E FI E + +++H +V+L G CLE + Y+ Q
Sbjct: 37 IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG 96
Query: 78 ELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSR 137
F E L + ++ M+YL + + HRD+ + N L+ + KVS+FG +R
Sbjct: 97 --LFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV 151
Query: 138 AVDQTHITT-----------QVHGTFGYLNPDDVCSFGVVLVELLTGAK-PIR------- 178
DQ +T +V Y + DV SFGV++ E+ + K P
Sbjct: 152 LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 211
Query: 179 ----FTTFEEDKNITVAKHAKRCLNPSGKKRPAMKEVASEL 215
T F K + H + +N K+RP + S L
Sbjct: 212 VEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRL 252
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 40/184 (21%)
Query: 24 RILGQGGQDIVYKGMAKVEKFINEVVIQSQINHINVVKLIGCCLET-------------- 69
++L QG + A E+ + E I Q+++ +V+LIG C
Sbjct: 369 KVLKQGTEK------ADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPL 422
Query: 70 -KYMHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKV 128
K++ + +E+P + +L + S M YL V HR++ + N+LL +++ AK+
Sbjct: 423 HKFLVGKREEIPVSNVAELLHQV--SMGMKYLEEKNFV---HRNLAARNVLLVNRHYAKI 477
Query: 129 SNFGTSRSRAVDQTHITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLT-GA 174
S+FG S++ D ++ T + G + + P+ DV S+GV + E L+ G
Sbjct: 478 SDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ 537
Query: 175 KPIR 178
KP +
Sbjct: 538 KPYK 541
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 89/221 (40%), Gaps = 44/221 (19%)
Query: 34 VYKGMAKVEKFINEVVIQSQINHINVVKLIGCCLE----------------TKYMHDQNK 77
+ +G E FI E + +++H +V+L G CLE + Y+ Q
Sbjct: 42 IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG 101
Query: 78 ELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSR 137
F E L + ++ M+YL + + HRD+ + N L+ + KVS+FG +R
Sbjct: 102 --LFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV 156
Query: 138 AVDQTHITT-----------QVHGTFGYLNPDDVCSFGVVLVELLTGAK-PIR------- 178
DQ +T +V Y + DV SFGV++ E+ + K P
Sbjct: 157 LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 216
Query: 179 ----FTTFEEDKNITVAKHAKRCLNPSGKKRPAMKEVASEL 215
T F K + H + +N ++RP + S L
Sbjct: 217 VEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRL 257
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 21/129 (16%)
Query: 76 NKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR 135
+ E P T + + + +A +++ H + I HRD+K NIL+ KV +FG +R
Sbjct: 108 HTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIAR 164
Query: 136 SRAVDQTHI--TTQVHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTF 182
+ A + T V GT YL+P+ DV S G VL E+LTG P F
Sbjct: 165 AIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP-----F 219
Query: 183 EEDKNITVA 191
D ++VA
Sbjct: 220 TGDSPVSVA 228
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 15/114 (13%)
Query: 76 NKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR 135
+KE+ FT E E + + +LH S+ I +RD+K NILLD++ K+++FG S+
Sbjct: 119 SKEVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK 175
Query: 136 SRAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPIR 178
++D GT Y+ P+ D SFGV++ E+LTG P +
Sbjct: 176 E-SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 228
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 15/114 (13%)
Query: 76 NKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR 135
+KE+ FT E E + + +LH S+ I +RD+K NILLD++ K+++FG S+
Sbjct: 118 SKEVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK 174
Query: 136 SRAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPIR 178
++D GT Y+ P+ D SFGV++ E+LTG P +
Sbjct: 175 E-SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 15/114 (13%)
Query: 76 NKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR 135
+KE+ FT E E + + +LH S+ I +RD+K NILLD++ K+++FG S+
Sbjct: 118 SKEVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK 174
Query: 136 SRAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPIR 178
++D GT Y+ P+ D SFGV++ E+LTG P +
Sbjct: 175 E-SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 90/235 (38%), Gaps = 56/235 (23%)
Query: 16 ATDSFNVNRILGQGGQDIVYKG----------------------MAKVEKFINEVVIQSQ 53
A + +NRILG+G VY+G + EKF++E VI
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 54 INHINVVKLIGCCLET---------------KYMHDQNKELPFTWEMQLRISIEASGTMS 98
++H ++VKLIG E Y+ L + S++ M+
Sbjct: 82 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVL--TLVLYSLQICKAMA 139
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD 158
YL S+ HRDI NIL+ C K+ +FG SR + + + +++P+
Sbjct: 140 YLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 196
Query: 159 -----------DVCSFGVVLVELLT-GAKPIRFTTFEEDKNITVAKHAKRCLNPS 201
DV F V + E+L+ G +P F E I V + R P
Sbjct: 197 SINFRRFTTASDVWMFAVCMWEILSFGKQP--FFWLENKDVIGVLEKGDRLPKPD 249
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 90/235 (38%), Gaps = 56/235 (23%)
Query: 16 ATDSFNVNRILGQGGQDIVYKG----------------------MAKVEKFINEVVIQSQ 53
A + +NRILG+G VY+G + EKF++E VI
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 54 INHINVVKLIGCCLET---------------KYMHDQNKELPFTWEMQLRISIEASGTMS 98
++H ++VKLIG E Y+ L + S++ M+
Sbjct: 70 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVL--TLVLYSLQICKAMA 127
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD 158
YL S+ HRDI NIL+ C K+ +FG SR + + + +++P+
Sbjct: 128 YLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 184
Query: 159 -----------DVCSFGVVLVELLT-GAKPIRFTTFEEDKNITVAKHAKRCLNPS 201
DV F V + E+L+ G +P F E I V + R P
Sbjct: 185 SINFRRFTTASDVWMFAVCMWEILSFGKQP--FFWLENKDVIGVLEKGDRLPKPD 237
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 31/162 (19%)
Query: 41 VEKFINEVVIQSQINHINVVKLIGCCLETK--YMHDQNKELPFTWEMQLRISIEASGTMS 98
+++F EV SQ++H N+V +I E Y+ + E P E IE+ G +S
Sbjct: 55 LKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEY-----IESHGPLS 109
Query: 99 Y-------------LHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHIT 145
+ + + I HRDIK NIL+D K+ +FG +++ + T
Sbjct: 110 VDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQT 169
Query: 146 TQVHGTFGYLNPD-----------DVCSFGVVLVELLTGAKP 176
V GT Y +P+ D+ S G+VL E+L G P
Sbjct: 170 NHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 90/235 (38%), Gaps = 56/235 (23%)
Query: 16 ATDSFNVNRILGQGGQDIVYKG----------------------MAKVEKFINEVVIQSQ 53
A + +NRILG+G VY+G + EKF++E VI
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 54 INHINVVKLIGCCLET---------------KYMHDQNKELPFTWEMQLRISIEASGTMS 98
++H ++VKLIG E Y+ L + S++ M+
Sbjct: 66 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVL--TLVLYSLQICKAMA 123
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD 158
YL S+ HRDI NIL+ C K+ +FG SR + + + +++P+
Sbjct: 124 YLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 180
Query: 159 -----------DVCSFGVVLVELLT-GAKPIRFTTFEEDKNITVAKHAKRCLNPS 201
DV F V + E+L+ G +P F E I V + R P
Sbjct: 181 SINFRRFTTASDVWMFAVCMWEILSFGKQP--FFWLENKDVIGVLEKGDRLPKPD 233
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 32/165 (19%)
Query: 40 KVEKFINEVVIQSQINHINVVKLIGCC-LE---------------TKYMHDQNKELPFTW 83
+VE+F+ E + +I H N+V+L+G C LE Y+ + N+E T
Sbjct: 71 EVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNRE-EVTA 129
Query: 84 EMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH 143
+ L ++ + S M YL + HRD+ + N L+ + + KV++FG SR D
Sbjct: 130 VVLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHVVKVADFGLSRLMTGDTYT 186
Query: 144 ITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKP 176
+ P+ DV +FGV+L E+ T G P
Sbjct: 187 AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSP 231
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 21/129 (16%)
Query: 76 NKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR 135
+ E P T + + + +A +++ H + I HRD+K NI++ KV +FG +R
Sbjct: 108 HTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIAR 164
Query: 136 SRAVDQTHI--TTQVHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTF 182
+ A + T V GT YL+P+ DV S G VL E+LTG P F
Sbjct: 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP-----F 219
Query: 183 EEDKNITVA 191
D ++VA
Sbjct: 220 TGDSPVSVA 228
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 15/114 (13%)
Query: 76 NKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR 135
+KE+ FT E E + + +LH S+ I +RD+K NILLD++ K+++FG S+
Sbjct: 122 SKEVMFTEEDVKFYLAELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK 178
Query: 136 SRAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPIR 178
A+D GT Y+ P+ D S+GV++ E+LTG+ P +
Sbjct: 179 E-AIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQ 231
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 21/129 (16%)
Query: 76 NKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR 135
+ E P T + + + +A +++ H + I HRD+K NI++ KV +FG +R
Sbjct: 108 HTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIAR 164
Query: 136 SRAVDQTHI--TTQVHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTF 182
+ A + T V GT YL+P+ DV S G VL E+LTG P F
Sbjct: 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP-----F 219
Query: 183 EEDKNITVA 191
D ++VA
Sbjct: 220 TGDSPVSVA 228
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 21/129 (16%)
Query: 76 NKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR 135
+ E P T + + + +A +++ H + I HRD+K NI++ KV +FG +R
Sbjct: 108 HTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIAR 164
Query: 136 SRAVDQTHI--TTQVHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTF 182
+ A + T V GT YL+P+ DV S G VL E+LTG P F
Sbjct: 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP-----F 219
Query: 183 EEDKNITVA 191
D ++VA
Sbjct: 220 TGDSPVSVA 228
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 89/221 (40%), Gaps = 44/221 (19%)
Query: 34 VYKGMAKVEKFINEVVIQSQINHINVVKLIGCCLE----------------TKYMHDQNK 77
+ +G + FI E + +++H +V+L G CLE + Y+ Q
Sbjct: 59 IKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG 118
Query: 78 ELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSR 137
F E L + ++ M+YL + + HRD+ + N L+ + KVS+FG +R
Sbjct: 119 --LFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV 173
Query: 138 AVDQTHITT-----------QVHGTFGYLNPDDVCSFGVVLVELLTGAK-PIR------- 178
DQ +T +V Y + DV SFGV++ E+ + K P
Sbjct: 174 LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 233
Query: 179 ----FTTFEEDKNITVAKHAKRCLNPSGKKRPAMKEVASEL 215
T F K + H + +N K+RP + S L
Sbjct: 234 VEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRL 274
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 21/129 (16%)
Query: 76 NKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR 135
+ E P T + + + +A +++ H + I HRD+K NI++ KV +FG +R
Sbjct: 125 HTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIAR 181
Query: 136 SRAVDQTHI--TTQVHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTF 182
+ A + T V GT YL+P+ DV S G VL E+LTG P F
Sbjct: 182 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP-----F 236
Query: 183 EEDKNITVA 191
D ++VA
Sbjct: 237 TGDSPVSVA 245
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 45/219 (20%)
Query: 43 KFINEVVIQSQINHINVVKLIGCCLETKYMH------DQNKELPF--TWEMQLRISI--- 91
KF+ E I Q +H N+V+LIG C + + ++ L F T +LR+
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQ 217
Query: 92 ---EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA---------V 139
+A+ M YL + HRD+ + N L+ +K K+S+FG SR A +
Sbjct: 218 MVGDAAAGMEYLESKCCI---HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGL 274
Query: 140 DQTHI--TTQVHGTFG-YLNPDDVCSFGVVLVELLT-GAKPIRFTTFEEDKNI------- 188
Q + T +G Y + DV SFG++L E + GA P + ++ +
Sbjct: 275 RQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRL 334
Query: 189 --------TVAKHAKRCLNPSGKKRPAMKEVASELAGIK 219
V + ++C +RP+ + EL I+
Sbjct: 335 PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 45/219 (20%)
Query: 43 KFINEVVIQSQINHINVVKLIGCCLETKYMH------DQNKELPF--TWEMQLRISI--- 91
KF+ E I Q +H N+V+LIG C + + ++ L F T +LR+
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQ 217
Query: 92 ---EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA---------V 139
+A+ M YL + HRD+ + N L+ +K K+S+FG SR A +
Sbjct: 218 MVGDAAAGMEYLESKCCI---HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGL 274
Query: 140 DQTHI--TTQVHGTFG-YLNPDDVCSFGVVLVELLT-GAKPIRFTTFEEDKNI------- 188
Q + T +G Y + DV SFG++L E + GA P + ++ +
Sbjct: 275 RQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRL 334
Query: 189 --------TVAKHAKRCLNPSGKKRPAMKEVASELAGIK 219
V + ++C +RP+ + EL I+
Sbjct: 335 PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 92/224 (41%), Gaps = 44/224 (19%)
Query: 36 KGMAKVEKFINEVVIQSQINHINVVKLIGCCLETK-----------------YMHDQNKE 78
K A + F+ E + +Q+ H N+V+L+G +E K Y+ + +
Sbjct: 44 KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 103
Query: 79 LPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
+ + L+ S++ M YL + V HRD+ + N+L+ + AKVS+FG ++ +
Sbjct: 104 V-LGGDCLLKFSLDVCEAMEYLEGNNFV---HRDLAARNVLVSEDNVAKVSDFGLTKEAS 159
Query: 139 VDQTHITTQVHGT-------FGYLNPDDVCSFGVVLVELLTGAK------PIRFTTFEED 185
Q V T + DV SFG++L E+ + + P++ +
Sbjct: 160 STQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE 219
Query: 186 KNI----------TVAKHAKRCLNPSGKKRPAMKEVASELAGIK 219
K V + K C + RP+ ++ +L IK
Sbjct: 220 KGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 263
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 71/162 (43%), Gaps = 33/162 (20%)
Query: 44 FINEVVIQSQINHINVVKLIGCC-------LETKYMHD-------QNKELPFTWEMQLRI 89
F++E I Q +H N+++L G + T+YM + + + FT MQL
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI-MQLVG 155
Query: 90 SIEASGT-MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQV 148
+ G M YL + + HRD+ + N+L+D KVS+FG SR D T
Sbjct: 156 MLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTT 212
Query: 149 HGTF-------------GYLNPDDVCSFGVVLVELLT-GAKP 176
G + + DV SFGVV+ E+L G +P
Sbjct: 213 GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 96/234 (41%), Gaps = 74/234 (31%)
Query: 7 LFISNELEKATDSFNVNRILGQGGQDIVYKGMAK-------------------------V 41
+F+ +E E A + ++R LGQG +VY+G+AK +
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 42 EKFINEVVIQSQINHINVVKLIGCCLETK----------------YMHDQNKEL------ 79
E F+NE + + N +VV+L+G + + Y+ E+
Sbjct: 65 E-FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 123
Query: 80 -PFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS-- 136
P + ++++ E + M+YL+ + V HRD+ + N ++ + + K+ +FG +R
Sbjct: 124 APPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIY 180
Query: 137 ---------------RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELLTGAK 175
R + + V T+ DV SFGVVL E+ T A+
Sbjct: 181 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS-----DVWSFGVVLWEIATLAE 229
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 110/270 (40%), Gaps = 62/270 (22%)
Query: 14 EKATDSFNVNRILGQGGQ-----DIVYKGMAKVEKFINEVVIQSQINHINVVKLIGCCLE 68
E T F V + GQ ++ +G ++FI E + ++H +V+L G C +
Sbjct: 16 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 69 -------TKYMHD-----QNKELPFTWEMQ--LRISIEASGTMSYLHLSASVPIYHRDIK 114
T+YM + +E+ ++ Q L + + M YL S HRD+
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 132
Query: 115 STNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTF-------------GYLNPDDVC 161
+ N L++D+ KVS+FG SR D+ T+ V F + + D+
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 162 SFGVVLVELLT-GAKPI-RFTTFEEDKNITVAKHAKR--------------CLNPSGKKR 205
+FGV++ E+ + G P RFT E ++I R C + +R
Sbjct: 191 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADER 250
Query: 206 PAMKEVASELAGIKAWNGASNVMEEGILGR 235
P K + S + +VM+E + G+
Sbjct: 251 PTFKILLSNIL---------DVMDENLYGQ 271
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 71/162 (43%), Gaps = 33/162 (20%)
Query: 44 FINEVVIQSQINHINVVKLIGCC-------LETKYMHD-------QNKELPFTWEMQLRI 89
F++E I Q +H N+++L G + T+YM + + + FT MQL
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI-MQLVG 155
Query: 90 SIEASGT-MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQV 148
+ G M YL + + HRD+ + N+L+D KVS+FG SR D T
Sbjct: 156 MLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTT 212
Query: 149 HGTF-------------GYLNPDDVCSFGVVLVELLT-GAKP 176
G + + DV SFGVV+ E+L G +P
Sbjct: 213 GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 16/115 (13%)
Query: 76 NKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR 135
+ E P T + + + +A +++ H + I HRD+K NI++ KV +FG +R
Sbjct: 108 HTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIAR 164
Query: 136 SRAVDQTHI--TTQVHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPI 177
+ A + T V GT YL+P+ DV S G VL E+LTG P
Sbjct: 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 32/165 (19%)
Query: 40 KVEKFINEVVIQSQINHINVVKLIGCCLET----------------KYMHDQNKELPFTW 83
+VE+F+ E + +I H N+V+L+G C Y+ + N++ +
Sbjct: 50 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSA 108
Query: 84 EMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH 143
+ L ++ + S M YL + HRD+ + N L+ + + KV++FG SR D
Sbjct: 109 VVLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXT 165
Query: 144 ITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKP 176
+ P+ DV +FGV+L E+ T G P
Sbjct: 166 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 210
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 72/239 (30%)
Query: 1 TIKKTKLFISNELEKATDSFNVNRILGQGGQDIVYKGMAK-------------------- 40
+ +++ +E E A + ++R LGQG +VY+G+AK
Sbjct: 2 SFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 61
Query: 41 -----VEKFINEVVIQSQINHINVVKLIGCCLETK----------------YMHDQNKEL 79
+E F+NE + + N +VV+L+G + + Y+ E+
Sbjct: 62 SMRERIE-FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEM 120
Query: 80 -------PFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFG 132
P + ++++ E + M+YL+ + V HRD+ + N ++ + + K+ +FG
Sbjct: 121 ENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFG 177
Query: 133 TSRSRAVDQTHITTQVHGTFG-----YLNPD-----------DVCSFGVVLVELLTGAK 175
+R D G G +++P+ DV SFGVVL E+ T A+
Sbjct: 178 MTR----DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 232
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 79/196 (40%), Gaps = 49/196 (25%)
Query: 26 LGQGGQDIVYKGMAK-----------------VEKFINEVVIQSQINHINVVKLIGCCLE 68
LG G VY+G+ K VE+F+ E + +I H N+V+L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 69 T----------------KYMHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRD 112
Y+ + N++ + + L ++ + S M YL + HRD
Sbjct: 79 EPPFYIIIEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKNFI---HRD 134
Query: 113 IKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-----------DVC 161
+ + N L+ + + KV++FG SR D + P+ DV
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 162 SFGVVLVELLT-GAKP 176
+FGV+L E+ T G P
Sbjct: 195 AFGVLLWEIATYGMSP 210
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 97/239 (40%), Gaps = 74/239 (30%)
Query: 2 IKKTKLFISNELEKATDSFNVNRILGQGGQDIVYKGMAK--------------------- 40
+ +++ +E E A + ++R LGQG +VY+G+AK
Sbjct: 2 VSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 61
Query: 41 ----VEKFINEVVIQSQINHINVVKLIGCCLETK----------------YMHDQNKEL- 79
+E F+NE + + N +VV+L+G + + Y+ E+
Sbjct: 62 MRERIE-FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 120
Query: 80 ------PFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGT 133
P + ++++ E + M+YL+ + V HRD+ + N ++ + + K+ +FG
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGM 177
Query: 134 SRS-----------------RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELLTGAK 175
+R R + + V T+ DV SFGVVL E+ T A+
Sbjct: 178 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS-----DVWSFGVVLWEIATLAE 231
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 97/239 (40%), Gaps = 74/239 (30%)
Query: 2 IKKTKLFISNELEKATDSFNVNRILGQGGQDIVYKGMAK--------------------- 40
+ +++ +E E A + ++R LGQG +VY+G+AK
Sbjct: 2 VSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 61
Query: 41 ----VEKFINEVVIQSQINHINVVKLIGCCLETK----------------YMHDQNKEL- 79
+E F+NE + + N +VV+L+G + + Y+ E+
Sbjct: 62 MRERIE-FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 120
Query: 80 ------PFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGT 133
P + ++++ E + M+YL+ + V HRD+ + N ++ + + K+ +FG
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGM 177
Query: 134 SRS-----------------RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELLTGAK 175
+R R + + V T+ DV SFGVVL E+ T A+
Sbjct: 178 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS-----DVWSFGVVLWEIATLAE 231
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 32/165 (19%)
Query: 40 KVEKFINEVVIQSQINHINVVKLIGCCLET----------------KYMHDQNKELPFTW 83
+VE+F+ E + +I H N+V+L+G C Y+ + N++ +
Sbjct: 57 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSA 115
Query: 84 EMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH 143
+ L ++ + S M YL + HRD+ + N L+ + + KV++FG SR D
Sbjct: 116 VVLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 172
Query: 144 ITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKP 176
+ P+ DV +FGV+L E+ T G P
Sbjct: 173 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 49/196 (25%)
Query: 26 LGQGGQDIVYKGMAK-----------------VEKFINEVVIQSQINHINVVKLIGCC-- 66
LG G VY+G+ K VE+F+ E + +I H N+V+L+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 67 -----LETKYMHDQNKELPFTWE---------MQLRISIEASGTMSYLHLSASVPIYHRD 112
+ T++M N L + E + L ++ + S M YL + HRD
Sbjct: 82 EPPFYIITEFMTYGNL-LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HRD 137
Query: 113 IKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-----------DVC 161
+ + N L+ + + KV++FG SR D + P+ DV
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVW 197
Query: 162 SFGVVLVELLT-GAKP 176
+FGV+L E+ T G P
Sbjct: 198 AFGVLLWEIATYGMSP 213
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 79/196 (40%), Gaps = 49/196 (25%)
Query: 26 LGQGGQDIVYKGMAK-----------------VEKFINEVVIQSQINHINVVKLIGCCLE 68
LG G VY+G+ K VE+F+ E + +I H N+V+L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 69 T----------------KYMHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRD 112
Y+ + N++ + + L ++ + S M YL + HRD
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKNFI---HRD 136
Query: 113 IKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-----------DVC 161
+ + N L+ + + KV++FG SR D + P+ DV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 162 SFGVVLVELLT-GAKP 176
+FGV+L E+ T G P
Sbjct: 197 AFGVLLWEIATYGMSP 212
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 49/196 (25%)
Query: 26 LGQGGQDIVYKGMAK-----------------VEKFINEVVIQSQINHINVVKLIGCC-- 66
LG G VY+G+ K VE+F+ E + +I H N+V+L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 67 -----LETKYMHDQNKELPFTWE---------MQLRISIEASGTMSYLHLSASVPIYHRD 112
+ T++M N L + E + L ++ + S M YL + HRD
Sbjct: 86 EPPFYIITEFMTYGNL-LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HRD 141
Query: 113 IKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-----------DVC 161
+ + N L+ + + KV++FG SR D + P+ DV
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 162 SFGVVLVELLT-GAKP 176
+FGV+L E+ T G P
Sbjct: 202 AFGVLLWEIATYGMSP 217
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 96/234 (41%), Gaps = 74/234 (31%)
Query: 7 LFISNELEKATDSFNVNRILGQGGQDIVYKGMAK-------------------------V 41
+++ +E E A + ++R LGQG +VY+G+AK +
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 42 EKFINEVVIQSQINHINVVKLIGCCLETK----------------YMHDQNKEL------ 79
E F+NE + + N +VV+L+G + + Y+ E+
Sbjct: 74 E-FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 132
Query: 80 -PFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS-- 136
P + ++++ E + M+YL+ + V HRD+ + N ++ + + K+ +FG +R
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
Query: 137 ---------------RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELLTGAK 175
R + + V T+ DV SFGVVL E+ T A+
Sbjct: 190 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS-----DVWSFGVVLWEIATLAE 238
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 92/224 (41%), Gaps = 44/224 (19%)
Query: 36 KGMAKVEKFINEVVIQSQINHINVVKLIGCCLETK-----------------YMHDQNKE 78
K A + F+ E + +Q+ H N+V+L+G +E K Y+ + +
Sbjct: 53 KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 112
Query: 79 LPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
+ + L+ S++ M YL + V HRD+ + N+L+ + AKVS+FG ++ +
Sbjct: 113 V-LGGDCLLKFSLDVCEAMEYLEGNNFV---HRDLAARNVLVSEDNVAKVSDFGLTKEAS 168
Query: 139 VDQTHITTQVHGTF-------GYLNPDDVCSFGVVLVELLTGAK------PIRFTTFEED 185
Q V T + DV SFG++L E+ + + P++ +
Sbjct: 169 STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE 228
Query: 186 KNI----------TVAKHAKRCLNPSGKKRPAMKEVASELAGIK 219
K V + K C + RP+ ++ +L IK
Sbjct: 229 KGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 32/165 (19%)
Query: 40 KVEKFINEVVIQSQINHINVVKLIGCCLET----------------KYMHDQNKELPFTW 83
+VE+F+ E + +I H N+V+L+G C Y+ + N++ +
Sbjct: 52 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVSA 110
Query: 84 EMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH 143
+ L ++ + S M YL + HRD+ + N L+ + + KV++FG SR D
Sbjct: 111 VVLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
Query: 144 ITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKP 176
+ P+ DV +FGV+L E+ T G P
Sbjct: 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 79/196 (40%), Gaps = 49/196 (25%)
Query: 26 LGQGGQDIVYKGMAK-----------------VEKFINEVVIQSQINHINVVKLIGCCLE 68
LG G VY+G+ K VE+F+ E + +I H N+V+L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 69 T----------------KYMHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRD 112
Y+ + N++ + + L ++ + S M YL + HRD
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKNFI---HRD 136
Query: 113 IKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-----------DVC 161
+ + N L+ + + KV++FG SR D + P+ DV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 162 SFGVVLVELLT-GAKP 176
+FGV+L E+ T G P
Sbjct: 197 AFGVLLWEIATYGMSP 212
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 92/224 (41%), Gaps = 44/224 (19%)
Query: 36 KGMAKVEKFINEVVIQSQINHINVVKLIGCCLETK-----------------YMHDQNKE 78
K A + F+ E + +Q+ H N+V+L+G +E K Y+ + +
Sbjct: 38 KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 97
Query: 79 LPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
+ + L+ S++ M YL + V HRD+ + N+L+ + AKVS+FG ++ +
Sbjct: 98 V-LGGDCLLKFSLDVCEAMEYLEGNNFV---HRDLAARNVLVSEDNVAKVSDFGLTKEAS 153
Query: 139 VDQTHITTQVHGTF-------GYLNPDDVCSFGVVLVELLTGAK------PIRFTTFEED 185
Q V T + DV SFG++L E+ + + P++ +
Sbjct: 154 STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE 213
Query: 186 KNI----------TVAKHAKRCLNPSGKKRPAMKEVASELAGIK 219
K V + K C + RP+ ++ +L IK
Sbjct: 214 KGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 257
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 49/196 (25%)
Query: 26 LGQGGQDIVYKGMAK-----------------VEKFINEVVIQSQINHINVVKLIGCC-- 66
LG G VY+G+ K VE+F+ E + +I H N+V+L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 67 -----LETKYMHDQNKELPFTWE---------MQLRISIEASGTMSYLHLSASVPIYHRD 112
+ T++M N L + E + L ++ + S M YL + HRD
Sbjct: 83 EPPFYIITEFMTYGNL-LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HRD 138
Query: 113 IKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-----------DVC 161
+ + N L+ + + KV++FG SR D + P+ DV
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVW 198
Query: 162 SFGVVLVELLT-GAKP 176
+FGV+L E+ T G P
Sbjct: 199 AFGVLLWEIATYGMSP 214
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 81/188 (43%), Gaps = 30/188 (15%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCCLE--TKYM---HDQNKELPFTWEMQL--------R 88
E E+ I +NH NVVK G E +Y+ + EL E + R
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS-RAVDQTHITTQ 147
+ + YLH + I HRDIK N+LLD++ K+S+FG + R ++ + +
Sbjct: 109 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAK 195
+ GT Y+ P+ DV S G+VL +L G P + + + + K K
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS-DSXQEYSDWKEKK 224
Query: 196 RCLNPSGK 203
LNP K
Sbjct: 225 TYLNPWKK 232
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 28/161 (17%)
Query: 36 KGMAKVEKFINEVVIQSQINHINVVKLIGCCLETK-----------------YMHDQNKE 78
K A + F+ E + +Q+ H N+V+L+G +E K Y+ + +
Sbjct: 225 KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 284
Query: 79 LPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
+ + L+ S++ M YL + V HRD+ + N+L+ + AKVS+FG ++ +
Sbjct: 285 V-LGGDCLLKFSLDVCEAMEYLEGNNFV---HRDLAARNVLVSEDNVAKVSDFGLTKEAS 340
Query: 139 VDQTHITTQVHGTF-------GYLNPDDVCSFGVVLVELLT 172
Q V T + DV SFG++L E+ +
Sbjct: 341 STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 32/165 (19%)
Query: 40 KVEKFINEVVIQSQINHINVVKLIGCCLET----------------KYMHDQNKELPFTW 83
+VE+F+ E + +I H N+V+L+G C Y+ + N++ +
Sbjct: 52 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVSA 110
Query: 84 EMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH 143
+ L ++ + S M YL + HRD+ + N L+ + + KV++FG SR D
Sbjct: 111 VVLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
Query: 144 ITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKP 176
+ P+ DV +FGV+L E+ T G P
Sbjct: 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 32/165 (19%)
Query: 40 KVEKFINEVVIQSQINHINVVKLIGCCLET----------------KYMHDQNKELPFTW 83
+VE+F+ E + +I H N+V+L+G C Y+ + N++ +
Sbjct: 50 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSA 108
Query: 84 EMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH 143
+ L ++ + S M YL + HRD+ + N L+ + + KV++FG SR D
Sbjct: 109 VVLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTFT 165
Query: 144 ITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKP 176
+ P+ DV +FGV+L E+ T G P
Sbjct: 166 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 210
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 49/196 (25%)
Query: 26 LGQGGQDIVYKGMAK-----------------VEKFINEVVIQSQINHINVVKLIGCC-- 66
LG G VY+G+ K VE+F+ E + +I H N+V+L+G C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 67 -----LETKYMHDQNKELPFTWE---------MQLRISIEASGTMSYLHLSASVPIYHRD 112
+ T++M N L + E + L ++ + S M YL + HRD
Sbjct: 85 EPPFYIITEFMTYGNL-LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HRD 140
Query: 113 IKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-----------DVC 161
+ + N L+ + + KV++FG SR D + P+ DV
Sbjct: 141 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 200
Query: 162 SFGVVLVELLT-GAKP 176
+FGV+L E+ T G P
Sbjct: 201 AFGVLLWEIATYGMSP 216
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 97/240 (40%), Gaps = 74/240 (30%)
Query: 1 TIKKTKLFISNELEKATDSFNVNRILGQGGQDIVYKGMAK-------------------- 40
+ +++ +E E A + ++R LGQG +VY+G+AK
Sbjct: 2 SFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 61
Query: 41 -----VEKFINEVVIQSQINHINVVKLIGCCLETK----------------YMHDQNKEL 79
+E F+NE + + N +VV+L+G + + Y+ E+
Sbjct: 62 SMRERIE-FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEM 120
Query: 80 -------PFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFG 132
P + ++++ E + M+YL+ + V HRD+ + N ++ + + K+ +FG
Sbjct: 121 ENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFG 177
Query: 133 TSRS-----------------RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELLTGAK 175
+R R + + V T+ DV SFGVVL E+ T A+
Sbjct: 178 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS-----DVWSFGVVLWEIATLAE 232
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 100/260 (38%), Gaps = 73/260 (28%)
Query: 24 RILGQGGQDIVYKGM------------------------AKVEKFINEVVIQSQINHINV 59
++LG G VYKG+ A VE F++E +I + ++H ++
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE-FMDEALIMASMDHPHL 102
Query: 60 VKLIGCCLE---------------TKYMHDQNKELPFTWEMQLRISIEASGTMSYLHLSA 104
V+L+G CL +Y+H+ + ++ L ++ + M YL
Sbjct: 103 VRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGS--QLLLNWCVQIAKGMMYLEERR 160
Query: 105 SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH------------ITTQVHGTF 152
V HRD+ + N+L+ K+++FG +R D+ + +
Sbjct: 161 LV---HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR 217
Query: 153 GYLNPDDVCSFGVVLVELLT-GAKPIRFTTFEEDKN---------------ITVAKHAKR 196
+ + DV S+GV + EL+T G KP E + I V +
Sbjct: 218 KFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMVMVK 277
Query: 197 CLNPSGKKRPAMKEVASELA 216
C RP KE+A+E +
Sbjct: 278 CWMIDADSRPKFKELAAEFS 297
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 78/196 (39%), Gaps = 49/196 (25%)
Query: 26 LGQGGQDIVYKGMAK-----------------VEKFINEVVIQSQINHINVVKLIGCCLE 68
LG G VY+G+ K VE+F+ E + +I H N+V+L+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 69 T----------------KYMHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRD 112
Y+ + N++ + L ++ + S M YL + HRD
Sbjct: 82 EPPFYIIIEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKNFI---HRD 137
Query: 113 IKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-----------DVC 161
+ + N L+ + + KV++FG SR D + P+ DV
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 197
Query: 162 SFGVVLVELLT-GAKP 176
+FGV+L E+ T G P
Sbjct: 198 AFGVLLWEIATYGMSP 213
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 32/165 (19%)
Query: 40 KVEKFINEVVIQSQINHINVVKLIGCC-------LETKYMHDQNKELPFTWE-------- 84
+VE+F+ E + +I H N+V+L+G C + T++M N L + E
Sbjct: 57 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL-LDYLRECNRQEVNA 115
Query: 85 -MQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH 143
+ L ++ + S M YL + HRD+ + N L+ + + KV++FG SR D
Sbjct: 116 VVLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 172
Query: 144 ITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKP 176
+ P+ DV +FGV+L E+ T G P
Sbjct: 173 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 49/196 (25%)
Query: 26 LGQGGQDIVYKGMAK-----------------VEKFINEVVIQSQINHINVVKLIGCC-- 66
LG G VY+G+ K VE+F+ E + +I H N+V+L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 67 -----LETKYMHDQNKELPFTWE---------MQLRISIEASGTMSYLHLSASVPIYHRD 112
+ T++M N L + E + L ++ + S M YL + HRD
Sbjct: 86 EPPFYIITEFMTYGNL-LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HRD 141
Query: 113 IKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-----------DVC 161
+ + N L+ + + KV++FG SR D + P+ DV
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 162 SFGVVLVELLT-GAKP 176
+FGV+L E+ T G P
Sbjct: 202 AFGVLLWEIATYGMSP 217
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 103/253 (40%), Gaps = 53/253 (20%)
Query: 14 EKATDSFNVNRILGQGGQ-----DIVYKGMAKVEKFINEVVIQSQINHINVVKLIGCCLE 68
E T F V + GQ ++ +G ++FI E + ++H +V+L G C +
Sbjct: 31 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 69 -------TKYMHD-----QNKELPFTWEMQ--LRISIEASGTMSYLHLSASVPIYHRDIK 114
T+YM + +E+ ++ Q L + + M YL S HRD+
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 147
Query: 115 STNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTF-------------GYLNPDDVC 161
+ N L++D+ KVS+FG SR D+ T+ V F + + D+
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLDDEE--TSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 162 SFGVVLVELLT-GAKPI-RFTTFEEDKNITVAKHAKR--------------CLNPSGKKR 205
+FGV++ E+ + G P RFT E ++I R C + +R
Sbjct: 206 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADER 265
Query: 206 PAMKEVASELAGI 218
P K + S + +
Sbjct: 266 PTFKILLSNILDV 278
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 49/196 (25%)
Query: 26 LGQGGQDIVYKGMAK-----------------VEKFINEVVIQSQINHINVVKLIGCC-- 66
LG G VY+G+ K VE+F+ E + +I H N+V+L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 67 -----LETKYMHDQNKELPFTWE---------MQLRISIEASGTMSYLHLSASVPIYHRD 112
+ T++M N L + E + L ++ + S M YL + HRD
Sbjct: 81 EPPFYIITEFMTYGNL-LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HRD 136
Query: 113 IKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-----------DVC 161
+ + N L+ + + KV++FG SR D + P+ DV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 162 SFGVVLVELLT-GAKP 176
+FGV+L E+ T G P
Sbjct: 197 AFGVLLWEIATYGMSP 212
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 32/165 (19%)
Query: 40 KVEKFINEVVIQSQINHINVVKLIGCC-------LETKYMHDQNKELPFTWE-------- 84
+VE+F+ E + +I H N+V+L+G C + T++M N L + E
Sbjct: 54 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL-LDYLRECNRQEVNA 112
Query: 85 -MQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH 143
+ L ++ + S M YL + HRD+ + N L+ + + KV++FG SR D
Sbjct: 113 VVLLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 169
Query: 144 ITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKP 176
+ P+ DV +FGV+L E+ T G P
Sbjct: 170 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 49/196 (25%)
Query: 26 LGQGGQDIVYKGMAK-----------------VEKFINEVVIQSQINHINVVKLIGCC-- 66
LG G VY+G+ K VE+F+ E + +I H N+V+L+G C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 67 -----LETKYMHDQNKELPFTWE---------MQLRISIEASGTMSYLHLSASVPIYHRD 112
+ T++M N L + E + L ++ + S M YL + HRD
Sbjct: 94 EPPFYIITEFMTYGNL-LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HRD 149
Query: 113 IKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-----------DVC 161
+ + N L+ + + KV++FG SR D + P+ DV
Sbjct: 150 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 209
Query: 162 SFGVVLVELLT-GAKP 176
+FGV+L E+ T G P
Sbjct: 210 AFGVLLWEIATYGMSP 225
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 49/196 (25%)
Query: 26 LGQGGQDIVYKGMAK-----------------VEKFINEVVIQSQINHINVVKLIGCC-- 66
LG G VY+G+ K VE+F+ E + +I H N+V+L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 67 -----LETKYMHDQNKELPFTWE---------MQLRISIEASGTMSYLHLSASVPIYHRD 112
+ T++M N L + E + L ++ + S M YL + HRD
Sbjct: 81 EPPFYIITEFMTYGNL-LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HRD 136
Query: 113 IKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-----------DVC 161
+ + N L+ + + KV++FG SR D + P+ DV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 162 SFGVVLVELLT-GAKP 176
+FGV+L E+ T G P
Sbjct: 197 AFGVLLWEIATYGMSP 212
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 103/253 (40%), Gaps = 53/253 (20%)
Query: 14 EKATDSFNVNRILGQGGQ-----DIVYKGMAKVEKFINEVVIQSQINHINVVKLIGCCLE 68
E T F V + GQ ++ +G ++FI E + ++H +V+L G C +
Sbjct: 31 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 69 -------TKYMHD-----QNKELPFTWEMQ--LRISIEASGTMSYLHLSASVPIYHRDIK 114
T+YM + +E+ ++ Q L + + M YL S HRD+
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 147
Query: 115 STNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTF-------------GYLNPDDVC 161
+ N L++D+ KVS+FG SR D+ T+ V F + + D+
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 162 SFGVVLVELLT-GAKPI-RFTTFEEDKNITVAKHAKR--------------CLNPSGKKR 205
+FGV++ E+ + G P RFT E ++I R C + +R
Sbjct: 206 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADER 265
Query: 206 PAMKEVASELAGI 218
P K + S + +
Sbjct: 266 PTFKILLSNILDV 278
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 100/261 (38%), Gaps = 75/261 (28%)
Query: 24 RILGQGGQDIVYKGM------------------------AKVEKFINEVVIQSQINHINV 59
++LG G VYKG+ A VE F++E +I + ++H ++
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE-FMDEALIMASMDHPHL 79
Query: 60 VKLIGCCLE---------------TKYMHDQNKELPFTWEMQLRISIEASGTMSYLHLSA 104
V+L+G CL +Y+H+ + ++ L ++ + M YL
Sbjct: 80 VRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGS--QLLLNWCVQIAKGMMYLEERR 137
Query: 105 SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ-------------VHGT 151
V HRD+ + N+L+ K+++FG +R D+ +H
Sbjct: 138 LV---HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR 194
Query: 152 FGYLNPDDVCSFGVVLVELLT-GAKPIRFTTFEEDKN---------------ITVAKHAK 195
+ + DV S+GV + EL+T G KP E + I V
Sbjct: 195 -KFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMVMV 253
Query: 196 RCLNPSGKKRPAMKEVASELA 216
+C RP KE+A+E +
Sbjct: 254 KCWMIDADSRPKFKELAAEFS 274
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 49/196 (25%)
Query: 26 LGQGGQDIVYKGMAK-----------------VEKFINEVVIQSQINHINVVKLIGCC-- 66
LG G VY+G+ K VE+F+ E + +I H N+V+L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 67 -----LETKYMHDQNKELPFTWE---------MQLRISIEASGTMSYLHLSASVPIYHRD 112
+ T++M N L + E + L ++ + S M YL + HRD
Sbjct: 83 EPPFYIITEFMTYGNL-LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HRD 138
Query: 113 IKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-----------DVC 161
+ + N L+ + + KV++FG SR D + P+ DV
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 198
Query: 162 SFGVVLVELLT-GAKP 176
+FGV+L E+ T G P
Sbjct: 199 AFGVLLWEIATYGMSP 214
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 28/162 (17%)
Query: 42 EKFINEVVIQSQINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLR 88
EKF+ E + Q +H ++VKLIG C L Q ++ +
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLIL 495
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQV 148
+ + S ++YL S HRDI + N+L+ C K+ +FG SR + ++
Sbjct: 496 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 552
Query: 149 HGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPIR 178
++ P+ DV FGV + E+L G KP +
Sbjct: 553 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 594
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 28/162 (17%)
Query: 42 EKFINEVVIQSQINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLR 88
EKF+ E + Q +H ++VKLIG C L Q ++ +
Sbjct: 61 EKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL 120
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQV 148
+ + S ++YL S HRDI + N+L+ C K+ +FG SR + ++
Sbjct: 121 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 177
Query: 149 HGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPIR 178
++ P+ DV FGV + E+L G KP +
Sbjct: 178 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 219
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 29/161 (18%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCCLE--TKYM---HDQNKELPFTWEMQL--------R 88
E E+ I +NH NVVK G E +Y+ + EL E + R
Sbjct: 50 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS-RAVDQTHITTQ 147
+ + YLH + I HRDIK N+LLD++ K+S+FG + R ++ + +
Sbjct: 110 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLTGAKP 176
+ GT Y+ P+ DV S G+VL +L G P
Sbjct: 167 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 28/162 (17%)
Query: 42 EKFINEVVIQSQINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLR 88
EKF+ E + Q +H ++VKLIG C L Q ++ +
Sbjct: 58 EKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL 117
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQV 148
+ + S ++YL S HRDI + N+L+ C K+ +FG SR + ++
Sbjct: 118 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 174
Query: 149 HGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPIR 178
++ P+ DV FGV + E+L G KP +
Sbjct: 175 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 216
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 29/161 (18%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCCLE--TKYM---HDQNKELPFTWEMQL--------R 88
E E+ I +NH NVVK G E +Y+ + EL E + R
Sbjct: 49 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS-RAVDQTHITTQ 147
+ + YLH + I HRDIK N+LLD++ K+S+FG + R ++ + +
Sbjct: 109 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLTGAKP 176
+ GT Y+ P+ DV S G+VL +L G P
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 29/161 (18%)
Query: 42 EKFINEVVIQSQINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLR 88
E E+ I +NH NVVK G C + ++ R
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS-RAVDQTHITTQ 147
+ + YLH + I HRDIK N+LLD++ K+S+FG + R ++ + +
Sbjct: 109 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLTGAKP 176
+ GT Y+ P+ DV S G+VL +L G P
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 28/162 (17%)
Query: 42 EKFINEVVIQSQINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLR 88
EKF+ E + Q +H ++VKLIG C L Q ++ +
Sbjct: 59 EKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL 118
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQV 148
+ + S ++YL S HRDI + N+L+ C K+ +FG SR + ++
Sbjct: 119 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 175
Query: 149 HGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPIR 178
++ P+ DV FGV + E+L G KP +
Sbjct: 176 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 217
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 103/253 (40%), Gaps = 53/253 (20%)
Query: 14 EKATDSFNVNRILGQGGQ-----DIVYKGMAKVEKFINEVVIQSQINHINVVKLIGCCLE 68
E T F V + GQ ++ +G ++FI E + ++H +V+L G C +
Sbjct: 22 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 69 -------TKYMHD-----QNKELPFTWEMQ--LRISIEASGTMSYLHLSASVPIYHRDIK 114
T+YM + +E+ ++ Q L + + M YL S HRD+
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 138
Query: 115 STNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTF-------------GYLNPDDVC 161
+ N L++D+ KVS+FG SR D+ T+ V F + + D+
Sbjct: 139 ARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 196
Query: 162 SFGVVLVELLT-GAKPI-RFTTFEEDKNITVAKHAKR--------------CLNPSGKKR 205
+FGV++ E+ + G P RFT E ++I R C + +R
Sbjct: 197 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADER 256
Query: 206 PAMKEVASELAGI 218
P K + S + +
Sbjct: 257 PTFKILLSNILDV 269
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 28/162 (17%)
Query: 42 EKFINEVVIQSQINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLR 88
EKF+ E + Q +H ++VKLIG C L Q ++ +
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLIL 115
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQV 148
+ + S ++YL S HRDI + N+L+ C K+ +FG SR + ++
Sbjct: 116 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG 172
Query: 149 HGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPIR 178
++ P+ DV FGV + E+L G KP +
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 78/196 (39%), Gaps = 49/196 (25%)
Query: 26 LGQGGQDIVYKGMAK-----------------VEKFINEVVIQSQINHINVVKLIGCCLE 68
LG G VY+G+ K VE+F+ E + +I H N+V+L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 69 T----------------KYMHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRD 112
Y+ + N++ + L ++ + S M YL + HRD
Sbjct: 86 EPPFYIIIEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKNFI---HRD 141
Query: 113 IKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-----------DVC 161
+ + N L+ + + KV++FG SR D + P+ DV
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 162 SFGVVLVELLT-GAKP 176
+FGV+L E+ T G P
Sbjct: 202 AFGVLLWEIATYGMSP 217
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 28/162 (17%)
Query: 42 EKFINEVVIQSQINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLR 88
EKF+ E + Q +H ++VKLIG C L Q ++ +
Sbjct: 84 EKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL 143
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQV 148
+ + S ++YL S HRDI + N+L+ C K+ +FG SR + ++
Sbjct: 144 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 200
Query: 149 HGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPIR 178
++ P+ DV FGV + E+L G KP +
Sbjct: 201 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 242
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 28/162 (17%)
Query: 42 EKFINEVVIQSQINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLR 88
EKF+ E + Q +H ++VKLIG C L Q ++ +
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL 115
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQV 148
+ + S ++YL S HRDI + N+L+ C K+ +FG SR + ++
Sbjct: 116 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 172
Query: 149 HGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPIR 178
++ P+ DV FGV + E+L G KP +
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 28/162 (17%)
Query: 42 EKFINEVVIQSQINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLR 88
EKF+ E + Q +H ++VKLIG C L Q ++ +
Sbjct: 53 EKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL 112
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQV 148
+ + S ++YL S HRDI + N+L+ C K+ +FG SR + ++
Sbjct: 113 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 169
Query: 149 HGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPIR 178
++ P+ DV FGV + E+L G KP +
Sbjct: 170 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 211
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 103/253 (40%), Gaps = 53/253 (20%)
Query: 14 EKATDSFNVNRILGQGGQ-----DIVYKGMAKVEKFINEVVIQSQINHINVVKLIGCCLE 68
E T F V + GQ ++ +G ++FI E + ++H +V+L G C +
Sbjct: 15 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 69 -------TKYMHD-----QNKELPFTWEMQ--LRISIEASGTMSYLHLSASVPIYHRDIK 114
T+YM + +E+ ++ Q L + + M YL S HRD+
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 131
Query: 115 STNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTF-------------GYLNPDDVC 161
+ N L++D+ KVS+FG SR D+ T+ V F + + D+
Sbjct: 132 ARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 189
Query: 162 SFGVVLVELLT-GAKPI-RFTTFEEDKNITVAKHAKR--------------CLNPSGKKR 205
+FGV++ E+ + G P RFT E ++I R C + +R
Sbjct: 190 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADER 249
Query: 206 PAMKEVASELAGI 218
P K + S + +
Sbjct: 250 PTFKILLSNILDV 262
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 28/162 (17%)
Query: 42 EKFINEVVIQSQINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLR 88
EKF+ E + Q +H ++VKLIG C L Q ++ +
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL 115
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQV 148
+ + S ++YL S HRDI + N+L+ C K+ +FG SR + ++
Sbjct: 116 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 172
Query: 149 HGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPIR 178
++ P+ DV FGV + E+L G KP +
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 96/234 (41%), Gaps = 74/234 (31%)
Query: 7 LFISNELEKATDSFNVNRILGQGGQDIVYKGMAK-------------------------V 41
+++ +E E A + ++R LGQG +VY+G+AK +
Sbjct: 36 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 95
Query: 42 EKFINEVVIQSQINHINVVKLIGCCLETK----------------YMHDQNKEL------ 79
E F+NE + + N +VV+L+G + + Y+ E+
Sbjct: 96 E-FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 154
Query: 80 -PFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS-- 136
P + ++++ E + M+YL+ + V HRD+ + N ++ + + K+ +FG +R
Sbjct: 155 APPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIY 211
Query: 137 ---------------RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELLTGAK 175
R + + V T+ DV SFGVVL E+ T A+
Sbjct: 212 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS-----DVWSFGVVLWEIATLAE 260
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 29/161 (18%)
Query: 42 EKFINEVVIQSQINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLR 88
E E+ I +NH NVVK G C + ++ R
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS-RAVDQTHITTQ 147
+ + YLH + I HRDIK N+LLD++ K+S+FG + R ++ + +
Sbjct: 110 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLTGAKP 176
+ GT Y+ P+ DV S G+VL +L G P
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 29/161 (18%)
Query: 42 EKFINEVVIQSQINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLR 88
E E+ I +NH NVVK G C + ++ R
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS-RAVDQTHITTQ 147
+ + YLH + I HRDIK N+LLD++ K+S+FG + R ++ + +
Sbjct: 109 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLTGAKP 176
+ GT Y+ P+ DV S G+VL +L G P
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 29/161 (18%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCCLE--TKYM---HDQNKELPFTWEMQL--------R 88
E E+ I +NH NVVK G E +Y+ + EL E + R
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS-RAVDQTHITTQ 147
+ + YLH + I HRDIK N+LLD++ K+S+FG + R ++ + +
Sbjct: 109 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLTGAKP 176
+ GT Y+ P+ DV S G+VL +L G P
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 66/162 (40%), Gaps = 28/162 (17%)
Query: 42 EKFINEVVIQSQINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLR 88
EKF+ E + Q +H ++VKLIG C L Q ++ +
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLIL 115
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQV 148
+ + S ++YL S HRDI + N+L+ C K+ +FG SR ++
Sbjct: 116 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKG 172
Query: 149 HGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPIR 178
++ P+ DV FGV + E+L G KP +
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 103/253 (40%), Gaps = 53/253 (20%)
Query: 14 EKATDSFNVNRILGQGGQ-----DIVYKGMAKVEKFINEVVIQSQINHINVVKLIGCCLE 68
E T F V + GQ ++ +G ++FI E + ++H +V+L G C +
Sbjct: 11 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 69 -------TKYMHD-----QNKELPFTWEMQ--LRISIEASGTMSYLHLSASVPIYHRDIK 114
T+YM + +E+ ++ Q L + + M YL S HRD+
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 127
Query: 115 STNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTF-------------GYLNPDDVC 161
+ N L++D+ KVS+FG SR D+ T+ V F + + D+
Sbjct: 128 ARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 185
Query: 162 SFGVVLVELLT-GAKPI-RFTTFEEDKNITVAKHAKR--------------CLNPSGKKR 205
+FGV++ E+ + G P RFT E ++I R C + +R
Sbjct: 186 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADER 245
Query: 206 PAMKEVASELAGI 218
P K + S + +
Sbjct: 246 PTFKILLSNILDV 258
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 42 EKFINEVVIQSQINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLR 88
E E+ I + +NH NVVK G C + ++ R
Sbjct: 50 ENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS-RAVDQTHITTQ 147
+ + YLH + I HRDIK N+LLD++ K+S+FG + R ++ + +
Sbjct: 110 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLTGAKP 176
+ GT Y+ P+ DV S G+VL +L G P
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 82/205 (40%), Gaps = 54/205 (26%)
Query: 23 NRILGQGGQDIVYKGMAKVEK-----------------------FINEVVIQSQINHINV 59
+++G G VYKGM K F+ E I Q +H N+
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 60 VKLIGCC-------LETKYMHD-------QNKELPFTWEMQLRISIEASGTMSYLHLSAS 105
++L G + T+YM + + K+ F+ + + + M YL A+
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL---AN 165
Query: 106 VPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTF------------- 152
+ HRD+ + NIL++ KVS+FG SR D T G
Sbjct: 166 MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR 225
Query: 153 GYLNPDDVCSFGVVLVELLT-GAKP 176
+ + DV SFG+V+ E++T G +P
Sbjct: 226 KFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 28/162 (17%)
Query: 42 EKFINEVVIQSQINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLR 88
EKF+ E + Q +H ++VKLIG C L Q ++ +
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLIL 495
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQV 148
+ + S ++YL S HRDI + N+L+ C K+ +FG SR + ++
Sbjct: 496 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG 552
Query: 149 HGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPIR 178
++ P+ DV FGV + E+L G KP +
Sbjct: 553 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 594
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 29/161 (18%)
Query: 42 EKFINEVVIQSQINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLR 88
E E+ I +NH NVVK G C + ++ R
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS-RAVDQTHITTQ 147
+ + YLH + I HRDIK N+LLD++ K+S+FG + R ++ + +
Sbjct: 110 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLTGAKP 176
+ GT Y+ P+ DV S G+VL +L G P
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 29/161 (18%)
Query: 42 EKFINEVVIQSQINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLR 88
E E+ I +NH NVVK G C + ++ R
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS-RAVDQTHITTQ 147
+ + YLH + I HRDIK N+LLD++ K+S+FG + R ++ + +
Sbjct: 110 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLTGAKP 176
+ GT Y+ P+ DV S G+VL +L G P
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 29/161 (18%)
Query: 42 EKFINEVVIQSQINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLR 88
E E+ I +NH NVVK G C + ++ R
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS-RAVDQTHITTQ 147
+ + YLH + I HRDIK N+LLD++ K+S+FG + R ++ + +
Sbjct: 110 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLTGAKP 176
+ GT Y+ P+ DV S G+VL +L G P
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 29/161 (18%)
Query: 42 EKFINEVVIQSQINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLR 88
E E+ I +NH NVVK G C + ++ R
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS-RAVDQTHITTQ 147
+ + YLH + I HRDIK N+LLD++ K+S+FG + R ++ + +
Sbjct: 109 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLTGAKP 176
+ GT Y+ P+ DV S G+VL +L G P
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 29/161 (18%)
Query: 42 EKFINEVVIQSQINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLR 88
E E+ I +NH NVVK G C + ++ R
Sbjct: 48 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 107
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS-RAVDQTHITTQ 147
+ + YLH + I HRDIK N+LLD++ K+S+FG + R ++ + +
Sbjct: 108 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 164
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLTGAKP 176
+ GT Y+ P+ DV S G+VL +L G P
Sbjct: 165 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 75/208 (36%), Gaps = 57/208 (27%)
Query: 18 DSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEVVIQSQINH 56
D F++ R LG+G VY K KFI E+ IQS + H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 57 INVVKLIGCCLETKYMHDQNK-----------ELPFTWEMQLRISIEASGTM-----SYL 100
N++++ Y HD+ + EL + R + S T L
Sbjct: 74 PNILRMYN------YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL 127
Query: 101 HLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-- 158
H + HRDIK N+L+ K K+++FG S + GT YL P+
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC---GTLDYLPPEMI 184
Query: 159 ---------DVCSFGVVLVELLTGAKPI 177
D+ GV+ E L G P
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 75/208 (36%), Gaps = 57/208 (27%)
Query: 18 DSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEVVIQSQINH 56
D F++ R LG+G VY K KFI E+ IQS + H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 57 INVVKLIGCCLETKYMHDQNK-----------ELPFTWEMQLRISIEASGTM-----SYL 100
N++++ Y HD+ + EL + R + S T L
Sbjct: 75 PNILRMYN------YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL 128
Query: 101 HLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-- 158
H + HRDIK N+L+ K K+++FG S + GT YL P+
Sbjct: 129 HYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC---GTLDYLPPEMI 185
Query: 159 ---------DVCSFGVVLVELLTGAKPI 177
D+ GV+ E L G P
Sbjct: 186 EGKTHDEKVDLWCAGVLCYEFLVGMPPF 213
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 29/161 (18%)
Query: 42 EKFINEVVIQSQINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLR 88
E E+ I +NH NVVK G C + ++ R
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS-RAVDQTHITTQ 147
+ + YLH + I HRDIK N+LLD++ K+S+FG + R ++ + +
Sbjct: 110 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLTGAKP 176
+ GT Y+ P+ DV S G+VL +L G P
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 29/161 (18%)
Query: 42 EKFINEVVIQSQINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLR 88
E E+ I +NH NVVK G C + ++ R
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS-RAVDQTHITTQ 147
+ + YLH + I HRDIK N+LLD++ K+S+FG + R ++ + +
Sbjct: 109 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLTGAKP 176
+ GT Y+ P+ DV S G+VL +L G P
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 29/161 (18%)
Query: 42 EKFINEVVIQSQINHINVVKLIG-------------CCLETKYMHDQNKELPFTWEMQLR 88
E E+ I +NH NVVK G C + ++ R
Sbjct: 49 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS-RAVDQTHITTQ 147
+ + YLH + I HRDIK N+LLD++ K+S+FG + R ++ + +
Sbjct: 109 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLTGAKP 176
+ GT Y+ P+ DV S G+VL +L G P
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 96/231 (41%), Gaps = 72/231 (31%)
Query: 9 ISNELEKATDSFNVNRILGQGGQDIVYKGMAK-------------------------VEK 43
+ +E E A + ++R LGQG +VY+G+AK +E
Sbjct: 1 VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE- 59
Query: 44 FINEVVIQSQINHINVVKLIGCCLETK----------------YMHDQNKEL-------P 80
F+NE + + N +VV+L+G + + Y+ E+ P
Sbjct: 60 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 119
Query: 81 FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVD 140
+ ++++ E + M+YL+ + V HRD+ + N ++ + + K+ +FG +R D
Sbjct: 120 PSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTR----D 172
Query: 141 QTHITTQVHGTFG-----YLNPD-----------DVCSFGVVLVELLTGAK 175
G G +++P+ DV SFGVVL E+ T A+
Sbjct: 173 IXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 223
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 95/234 (40%), Gaps = 74/234 (31%)
Query: 7 LFISNELEKATDSFNVNRILGQGGQDIVYKGMAK-------------------------V 41
+++ +E E A + ++R LGQG +VY+G+AK +
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 42 EKFINEVVIQSQINHINVVKLIGCCLETK----------------YMHDQNKEL------ 79
E F+NE + + N +VV+L+G + + Y+ E+
Sbjct: 61 E-FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 80 -PFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS-- 136
P + ++++ E + M+YL+ + V HRD+ + N + + + K+ +FG +R
Sbjct: 120 APPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCXVAEDFTVKIGDFGMTRDIY 176
Query: 137 ---------------RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELLTGAK 175
R + + V T+ DV SFGVVL E+ T A+
Sbjct: 177 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS-----DVWSFGVVLWEIATLAE 225
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 29/161 (18%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCCLE--TKYM---HDQNKELPFTWEMQL--------R 88
E E+ I +NH NVVK G E +Y+ + EL E + R
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS-RAVDQTHITTQ 147
+ + YLH + I HRDIK N+LLD++ K+S+FG + R ++ + +
Sbjct: 109 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLTGAKP 176
+ GT Y+ P+ DV S G+VL +L G P
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 29/161 (18%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCCLE--TKYM---HDQNKELPFTWEMQL--------R 88
E E+ I +NH NVVK G E +Y+ + EL E + R
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS-RAVDQTHITTQ 147
+ + YLH + I HRDIK N+LLD++ K+S+FG + R ++ + +
Sbjct: 109 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLTGAKP 176
+ GT Y+ P+ DV S G+VL +L G P
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 79/196 (40%), Gaps = 49/196 (25%)
Query: 26 LGQGGQDIVYKGMAK-----------------VEKFINEVVIQSQINHINVVKLIGCCLE 68
LG G VY+G+ K VE+F+ E + +I H N+V+L+G C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 69 T----------------KYMHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRD 112
Y+ + N++ + + L ++ + S M YL + HR+
Sbjct: 288 EPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKNFI---HRN 343
Query: 113 IKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-----------DVC 161
+ + N L+ + + KV++FG SR D + P+ DV
Sbjct: 344 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 403
Query: 162 SFGVVLVELLT-GAKP 176
+FGV+L E+ T G P
Sbjct: 404 AFGVLLWEIATYGMSP 419
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 29/161 (18%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCCLE--TKYM---HDQNKELPFTWEMQL--------R 88
E E+ I +NH NVVK G E +Y+ + EL E + R
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS-RAVDQTHITTQ 147
+ + YLH + I HRDIK N+LLD++ K+S+FG + R ++ + +
Sbjct: 109 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLTGAKP 176
+ GT Y+ P+ DV S G+VL +L G P
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 29/161 (18%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCCLE--TKYM---HDQNKELPFTWEMQL--------R 88
E E+ I +NH NVVK G E +Y+ + EL E + R
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS-RAVDQTHITTQ 147
+ + YLH + I HRDIK N+LLD++ K+S+FG + R ++ + +
Sbjct: 110 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLTGAKP 176
+ GT Y+ P+ DV S G+VL +L G P
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 94/232 (40%), Gaps = 74/232 (31%)
Query: 9 ISNELEKATDSFNVNRILGQGGQDIVYKGMAK-------------------------VEK 43
+ +E E A + ++R LGQG +VY+G+AK +E
Sbjct: 3 VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE- 61
Query: 44 FINEVVIQSQINHINVVKLIGCCLETK----------------YMHDQNKEL-------P 80
F+NE + + N +VV+L+G + + Y+ E+ P
Sbjct: 62 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 121
Query: 81 FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS---- 136
+ ++++ E + M+YL+ + V HRD+ + N ++ + + K+ +FG +R
Sbjct: 122 PSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIYET 178
Query: 137 -------------RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELLTGAK 175
R + + V T+ DV SFGVVL E+ T A+
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYS-----DVWSFGVVLWEIATLAE 225
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 29/161 (18%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCCLE--TKYM---HDQNKELPFTWEMQL--------R 88
E E+ I +NH NVVK G E +Y+ + EL E + R
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS-RAVDQTHITTQ 147
+ + YLH + I HRDIK N+LLD++ K+S+FG + R ++ + +
Sbjct: 109 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLTGAKP 176
+ GT Y+ P+ DV S G+VL +L G P
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 94/234 (40%), Gaps = 74/234 (31%)
Query: 7 LFISNELEKATDSFNVNRILGQGGQDIVYKGMAK-------------------------V 41
+++ +E E A + ++R LGQG +VY+G+AK +
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 42 EKFINEVVIQSQINHINVVKLIGCC---------LETKYMHDQNKEL------------- 79
E F+NE + + N +VV+L+G +E D L
Sbjct: 74 E-FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 132
Query: 80 -PFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS-- 136
P + ++++ E + M+YL+ + V HRD+ + N ++ + + K+ +FG +R
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
Query: 137 ---------------RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELLTGAK 175
R + + V T+ DV SFGVVL E+ T A+
Sbjct: 190 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS-----DVWSFGVVLWEIATLAE 238
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 43/173 (24%)
Query: 44 FINEVVIQSQI-NHINVVKLIGCC------------------LETKYMHDQNKELPF--- 81
++E+ I I +H+NVV L+G C L T +N+ +P+
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 82 -----TWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS 136
T E + S + + M +L AS HRD+ + NILL +K K+ +FG +R
Sbjct: 137 YKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARD 193
Query: 137 RAVDQTHITT-QVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKP 176
D ++ ++ P+ DV SFGV+L E+ + GA P
Sbjct: 194 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 104/252 (41%), Gaps = 51/252 (20%)
Query: 14 EKATDSFNVNRILGQGGQ-----DIVYKGMAKVEKFINEVVIQSQINHINVVKLIGCCLE 68
E T F V + GQ ++ +G ++FI E + ++H +V+L G C +
Sbjct: 16 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 69 -------TKYMHD-----QNKELPFTWEMQ--LRISIEASGTMSYLHLSASVPIYHRDIK 114
T+YM + +E+ ++ Q L + + M YL S HRD+
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 132
Query: 115 STNILLDDKYCAKVSNFGTSRSRAVDQTHITT------------QVHGTFGYLNPDDVCS 162
+ N L++D+ KVS+FG SR +D + ++ +V + + D+ +
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWA 191
Query: 163 FGVVLVELLT-GAKPI-RFTTFEEDKNITVAKHAKR--------------CLNPSGKKRP 206
FGV++ E+ + G P RFT E ++I R C + +RP
Sbjct: 192 FGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERP 251
Query: 207 AMKEVASELAGI 218
K + S + +
Sbjct: 252 TFKILLSNILDV 263
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 80/196 (40%), Gaps = 49/196 (25%)
Query: 26 LGQGGQDIVYKGMAK-----------------VEKFINEVVIQSQINHINVVKLIGCCLE 68
LG G VY+G+ K VE+F+ E + +I H N+V+L+G C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 69 -------TKYMHDQNKELPFTWE---------MQLRISIEASGTMSYLHLSASVPIYHRD 112
T++M N L + E + L ++ + S M YL + HR+
Sbjct: 327 EPPFYIITEFMTYGNL-LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HRN 382
Query: 113 IKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-----------DVC 161
+ + N L+ + + KV++FG SR D + P+ DV
Sbjct: 383 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 442
Query: 162 SFGVVLVELLT-GAKP 176
+FGV+L E+ T G P
Sbjct: 443 AFGVLLWEIATYGMSP 458
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 80/196 (40%), Gaps = 49/196 (25%)
Query: 26 LGQGGQDIVYKGMAK-----------------VEKFINEVVIQSQINHINVVKLIGCCLE 68
LG G VY+G+ K VE+F+ E + +I H N+V+L+G C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 69 -------TKYMHDQNKELPFTWE---------MQLRISIEASGTMSYLHLSASVPIYHRD 112
T++M N L + E + L ++ + S M YL + HR+
Sbjct: 285 EPPFYIITEFMTYGNL-LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HRN 340
Query: 113 IKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-----------DVC 161
+ + N L+ + + KV++FG SR D + P+ DV
Sbjct: 341 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 400
Query: 162 SFGVVLVELLT-GAKP 176
+FGV+L E+ T G P
Sbjct: 401 AFGVLLWEIATYGMSP 416
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 94/234 (40%), Gaps = 74/234 (31%)
Query: 7 LFISNELEKATDSFNVNRILGQGGQDIVYKGMAK-------------------------V 41
+++ +E E A + ++R LGQG +VY+G+AK +
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 63
Query: 42 EKFINEVVIQSQINHINVVKLIGCC---------LETKYMHDQNKEL------------- 79
E F+NE + + N +VV+L+G +E D L
Sbjct: 64 E-FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 122
Query: 80 -PFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS-- 136
P + ++++ E + M+YL+ + V HRD+ + N ++ + + K+ +FG +R
Sbjct: 123 APPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIY 179
Query: 137 ---------------RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELLTGAK 175
R + + V T+ DV SFGVVL E+ T A+
Sbjct: 180 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS-----DVWSFGVVLWEIATLAE 228
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 75/208 (36%), Gaps = 57/208 (27%)
Query: 18 DSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEVVIQSQINH 56
D F++ R LG+G VY K KFI E+ IQS + H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 57 INVVKLIGCCLETKYMHDQNK-----------ELPFTWEMQLRISIEASGTM-----SYL 100
N++++ Y HD+ + EL + R + S T L
Sbjct: 74 PNILRMYN------YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL 127
Query: 101 HLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-- 158
H + HRDIK N+L+ K K+++FG S + GT YL P+
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC---GTLDYLPPEMI 184
Query: 159 ---------DVCSFGVVLVELLTGAKPI 177
D+ GV+ E L G P
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 34/130 (26%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D + CAK+ +FG S A+ T GT Y P+
Sbjct: 160 VVHRDIKDENILIDLRRGCAKLIDFG---SGALLHDEPYTDFDGTRVYSPPEWISRHQYH 216
Query: 159 ----DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAK-----HA--------KRCLNPS 201
V S G++L +++ G P FE D+ I A+ H +RCL P
Sbjct: 217 ALPATVWSLGILLYDMVCGDIP-----FERDQEILEAELHFPAHVSPDCCALIRRCLAPK 271
Query: 202 GKKRPAMKEV 211
RP+++E+
Sbjct: 272 PSSRPSLEEI 281
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 98/255 (38%), Gaps = 70/255 (27%)
Query: 26 LGQGGQDIVYKGMAKV----------EKFINEVVIQSQI-NHINVVKLIGCC-------- 66
G G +D V K K+ E ++E+ I S + H N+V L+G C
Sbjct: 60 FGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLV 119
Query: 67 -------------LETKYMHDQNKE--LPFTWEMQLRISIEASGTMSYLHLSASVPIYHR 111
L K D +KE P L S + + M++L AS HR
Sbjct: 120 ITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHR 176
Query: 112 DIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITT-QVHGTFGYLNPD-----------D 159
D+ + N+LL + + AK+ +FG +R D +I ++ P+ D
Sbjct: 177 DVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSD 236
Query: 160 VCSFGVVLVELLT-GAKPI-------RFTTFEED-----------KNITVAKHAKRCLNP 200
V S+G++L E+ + G P +F +D KNI A L P
Sbjct: 237 VWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEP 296
Query: 201 SGKKRPAMKEVASEL 215
+ RP +++ S L
Sbjct: 297 T--HRPTFQQICSFL 309
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 98/255 (38%), Gaps = 70/255 (27%)
Query: 26 LGQGGQDIVYKGMAKV----------EKFINEVVIQSQI-NHINVVKLIGCC-------- 66
G G +D V K K+ E ++E+ I S + H N+V L+G C
Sbjct: 68 FGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLV 127
Query: 67 -------------LETKYMHDQNKE--LPFTWEMQLRISIEASGTMSYLHLSASVPIYHR 111
L K D +KE P L S + + M++L AS HR
Sbjct: 128 ITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHR 184
Query: 112 DIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITT-QVHGTFGYLNPD-----------D 159
D+ + N+LL + + AK+ +FG +R D +I ++ P+ D
Sbjct: 185 DVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSD 244
Query: 160 VCSFGVVLVELLT-GAKPI-------RFTTFEED-----------KNITVAKHAKRCLNP 200
V S+G++L E+ + G P +F +D KNI A L P
Sbjct: 245 VWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEP 304
Query: 201 SGKKRPAMKEVASEL 215
+ RP +++ S L
Sbjct: 305 T--HRPTFQQICSFL 317
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 19/96 (19%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTF---- 152
+ YLH + + HRD+K+ NILL + ++++FG S A +V TF
Sbjct: 134 LEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 153 ------------GYLNPDDVCSFGVVLVELLTGAKP 176
GY D+ SFG+ +EL TGA P
Sbjct: 191 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 19/96 (19%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTF---- 152
+ YLH + + HRD+K+ NILL + ++++FG S A +V TF
Sbjct: 129 LEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 185
Query: 153 ------------GYLNPDDVCSFGVVLVELLTGAKP 176
GY D+ SFG+ +EL TGA P
Sbjct: 186 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 107/267 (40%), Gaps = 57/267 (21%)
Query: 2 IKKTKLFISNELEKATDSFNVNRILGQGGQ-----DIVYKGMAKVEKFINEVVIQSQINH 56
+K+ ++ + EL + F V ++ GQ ++ +G ++F E +++H
Sbjct: 5 LKREEITLLKEL--GSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSH 62
Query: 57 INVVKLIGCCLE----------------TKYMHDQNKELPFTWEMQLRISIEASGTMSYL 100
+VK G C + Y+ K L + L + + M++L
Sbjct: 63 PKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPS--QLLEMCYDVCEGMAFL 120
Query: 101 HLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITT------------QV 148
S HRD+ + N L+D C KVS+FG +R +D ++++ +V
Sbjct: 121 ---ESHQFIHRDLAARNCLVDRDLCVKVSDFGMTR-YVLDDQYVSSVGTKFPVKWSAPEV 176
Query: 149 HGTFGYLNPDDVCSFGVVLVELLT-GAKPIRFTTFEED---------------KNITVAK 192
F Y + DV +FG+++ E+ + G P T E + T+ +
Sbjct: 177 FHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQ 236
Query: 193 HAKRCLNPSGKKRPAMKEVASELAGIK 219
C + +KRP +++ S + ++
Sbjct: 237 IMYSCWHELPEKRPTFQQLLSSIEPLR 263
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 97/261 (37%), Gaps = 76/261 (29%)
Query: 26 LGQGGQDIVYKGMAKV----------EKFINEVVIQSQI-NHINVVKLIGCC-------- 66
G G +D V K K+ E ++E+ I S + H N+V L+G C
Sbjct: 68 FGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLV 127
Query: 67 ---------------------LETKYMHDQNKELPFTWEMQLRISIEASGTMSYLHLSAS 105
LE Y N E + L S + + M++L AS
Sbjct: 128 ITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---AS 184
Query: 106 VPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITT-QVHGTFGYLNPD------ 158
HRD+ + N+LL + + AK+ +FG +R D +I ++ P+
Sbjct: 185 KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV 244
Query: 159 -----DVCSFGVVLVELLT-GAKPI-------RFTTFEED-----------KNITVAKHA 194
DV S+G++L E+ + G P +F +D KNI A
Sbjct: 245 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQA 304
Query: 195 KRCLNPSGKKRPAMKEVASEL 215
L P+ RP +++ S L
Sbjct: 305 CWALEPT--HRPTFQQICSFL 323
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 43/173 (24%)
Query: 44 FINEVVIQSQI-NHINVVKLIGCC------------------LETKYMHDQNKELPF--- 81
++E+ I I +H+NVV L+G C L T +N+ +P+
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 82 -----TWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS 136
T E + S + + M +L AS HRD+ + NILL +K K+ +FG +R
Sbjct: 137 YKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARD 193
Query: 137 RAVDQTHITT-QVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKP 176
D ++ ++ P+ DV SFGV+L E+ + GA P
Sbjct: 194 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 76/184 (41%), Gaps = 45/184 (24%)
Query: 44 FINEVVIQSQI-NHINVVKLIGCC------------------LETKYMHDQNKELPF--- 81
++E+ I I +H+NVV L+G C L T +N+ +P+
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPE 138
Query: 82 -------TWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTS 134
T E + S + + M +L AS HRD+ + NILL +K K+ +FG +
Sbjct: 139 DLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLA 195
Query: 135 RSRAVDQTHITT-QVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPIRFTT 181
R D + ++ P+ DV SFGV+L E+ + GA P
Sbjct: 196 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 255
Query: 182 FEED 185
+E+
Sbjct: 256 IDEE 259
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 31/161 (19%)
Query: 44 FINEVVIQSQINHINVVKLIGCCLETK-------YMHD-------QNKELPFTWEMQLRI 89
F+ E I Q +H N+++L G ++K YM + + + FT + +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
+ M YL + + HRD+ + NIL++ KVS+FG SR D T
Sbjct: 153 LRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 150 GTF-------------GYLNPDDVCSFGVVLVELLT-GAKP 176
G + + DV S+G+VL E+++ G +P
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 31/161 (19%)
Query: 44 FINEVVIQSQINHINVVKLIGCCLETK-------YMHD-------QNKELPFTWEMQLRI 89
F+ E I Q +H N+++L G ++K YM + + + FT + +
Sbjct: 81 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 140
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
+ M YL + + HRD+ + NIL++ KVS+FG SR D T
Sbjct: 141 LRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 197
Query: 150 GTF-------------GYLNPDDVCSFGVVLVELLT-GAKP 176
G + + DV S+G+VL E+++ G +P
Sbjct: 198 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 47/186 (25%)
Query: 44 FINEVVIQSQI-NHINVVKLIGCC------------------LETKYMHDQNKELPF--- 81
++E+ I I +H+NVV L+G C L T +N+ +P+
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 82 ---------TWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFG 132
T E + S + + M +L AS HRD+ + NILL +K K+ +FG
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFG 184
Query: 133 TSRSRAVDQTHITT-QVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPIRF 179
+R D ++ ++ P+ DV SFGV+L E+ + GA P
Sbjct: 185 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
Query: 180 TTFEED 185
+E+
Sbjct: 245 VKIDEE 250
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 31/161 (19%)
Query: 44 FINEVVIQSQINHINVVKLIGCCLETK-------YMHD-------QNKELPFTWEMQLRI 89
F+ E I Q +H N+++L G ++K YM + + + FT + +
Sbjct: 64 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 123
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
+ M YL + + HRD+ + NIL++ KVS+FG SR D T
Sbjct: 124 LRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 150 GTF-------------GYLNPDDVCSFGVVLVELLT-GAKP 176
G + + DV S+G+VL E+++ G +P
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 66/164 (40%), Gaps = 32/164 (19%)
Query: 41 VEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELP--------------FTWEMQ 86
++ FI EV ++H N+++L G L T M + P F
Sbjct: 65 MDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTL 123
Query: 87 LRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITT 146
R +++ + M YL S HRD+ + N+LL + K+ +FG R+ + H
Sbjct: 124 SRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 180
Query: 147 QVHGT--FGYLNPD-----------DVCSFGVVLVELLT-GAKP 176
Q H F + P+ D FGV L E+ T G +P
Sbjct: 181 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 66/164 (40%), Gaps = 32/164 (19%)
Query: 41 VEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELP--------------FTWEMQ 86
++ FI EV ++H N+++L G L T M + P F
Sbjct: 65 MDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTL 123
Query: 87 LRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITT 146
R +++ + M YL S HRD+ + N+LL + K+ +FG R+ + H
Sbjct: 124 SRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVM 180
Query: 147 QVHGT--FGYLNPD-----------DVCSFGVVLVELLT-GAKP 176
Q H F + P+ D FGV L E+ T G +P
Sbjct: 181 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 47/186 (25%)
Query: 44 FINEVVIQSQI-NHINVVKLIGCC------------------LETKYMHDQNKELPF--- 81
++E+ I I +H+NVV L+G C L T +N+ +P+
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEA 138
Query: 82 ---------TWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFG 132
T E + S + + M +L AS HRD+ + NILL +K K+ +FG
Sbjct: 139 PEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFG 195
Query: 133 TSRSRAVDQTHITT-QVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPIRF 179
+R D ++ ++ P+ DV SFGV+L E+ + GA P
Sbjct: 196 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 255
Query: 180 TTFEED 185
+E+
Sbjct: 256 VKIDEE 261
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 31/161 (19%)
Query: 44 FINEVVIQSQINHINVVKLIGCCLETK-------YMHD-------QNKELPFTWEMQLRI 89
F+ E I Q +H N+++L G ++K YM + + + FT + +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
+ M YL + + HRD+ + NIL++ KVS+FG SR D T
Sbjct: 153 LRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 150 GTF-------------GYLNPDDVCSFGVVLVELLT-GAKP 176
G + + DV S+G+VL E+++ G +P
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 31/161 (19%)
Query: 44 FINEVVIQSQINHINVVKLIGCCLETK-------YMHD-------QNKELPFTWEMQLRI 89
F+ E I Q +H N+++L G ++K YM + + + FT + +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
+ M YL + + HRD+ + NIL++ KVS+FG SR D T
Sbjct: 153 LRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 150 GTF-------------GYLNPDDVCSFGVVLVELLT-GAKP 176
G + + DV S+G+VL E+++ G +P
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 31/161 (19%)
Query: 44 FINEVVIQSQINHINVVKLIGCCLETK-------YMHD-------QNKELPFTWEMQLRI 89
F+ E I Q +H N+++L G ++K YM + + + FT + +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
+ M YL + + HRD+ + NIL++ KVS+FG SR D T
Sbjct: 153 LRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 150 GTF-------------GYLNPDDVCSFGVVLVELLT-GAKP 176
G + + DV S+G+VL E+++ G +P
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 47/186 (25%)
Query: 44 FINEVVIQSQI-NHINVVKLIGCC------------------LETKYMHDQNKELPF--- 81
++E+ I I +H+NVV L+G C L T +N+ +P+
Sbjct: 114 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 173
Query: 82 ---------TWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFG 132
T E + S + + M +L AS HRD+ + NILL +K K+ +FG
Sbjct: 174 PEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFG 230
Query: 133 TSRSRAVDQTHITT-QVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPIRF 179
+R D ++ ++ P+ DV SFGV+L E+ + GA P
Sbjct: 231 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290
Query: 180 TTFEED 185
+E+
Sbjct: 291 VKIDEE 296
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 33/162 (20%)
Query: 44 FINEVVIQSQINHINVVKLIGCCLE-------TKYMHD-------QNKELPFTWEMQLRI 89
F++E I Q +H N++ L G + T+YM + + + FT +QL
Sbjct: 77 FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT-VIQLVG 135
Query: 90 SIEASGT-MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQV 148
+ G+ M YL ++V HRD+ + NIL++ KVS+FG SR D T
Sbjct: 136 MLRGIGSGMKYLSDMSAV---HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 192
Query: 149 HGTF-------------GYLNPDDVCSFGVVLVELLT-GAKP 176
G + + DV S+G+V+ E+++ G +P
Sbjct: 193 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 31/161 (19%)
Query: 44 FINEVVIQSQINHINVVKLIGCCLETK-------YMHD-------QNKELPFTWEMQLRI 89
F+ E I Q +H N+++L G ++K YM + + + FT + +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
+ M YL + + HRD+ + NIL++ KVS+FG SR D T
Sbjct: 153 LRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 150 GTF-------------GYLNPDDVCSFGVVLVELLT-GAKP 176
G + + DV S+G+VL E+++ G +P
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 47/186 (25%)
Query: 44 FINEVVIQSQI-NHINVVKLIGCC------------------LETKYMHDQNKELPF--- 81
++E+ I I +H+NVV L+G C L T +N+ +P+
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 82 ---------TWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFG 132
T E + S + + M +L AS HRD+ + NILL +K K+ +FG
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFG 193
Query: 133 TSRSRAVDQTHITT-QVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPIRF 179
+R D ++ ++ P+ DV SFGV+L E+ + GA P
Sbjct: 194 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Query: 180 TTFEED 185
+E+
Sbjct: 254 VKIDEE 259
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 47/186 (25%)
Query: 44 FINEVVIQSQI-NHINVVKLIGCC------------------LETKYMHDQNKELPF--- 81
++E+ I I +H+NVV L+G C L T +N+ +P+
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 82 ---------TWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFG 132
T E + S + + M +L AS HRD+ + NILL +K K+ +FG
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFG 184
Query: 133 TSRSRAVDQTHITT-QVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPIRF 179
+R D ++ ++ P+ DV SFGV+L E+ + GA P
Sbjct: 185 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
Query: 180 TTFEED 185
+E+
Sbjct: 245 VKIDEE 250
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 63/156 (40%), Gaps = 34/156 (21%)
Query: 46 NEVVIQSQINHINVVKLIGCC---------LETKY-----MHDQNKELPFTWEMQLRISI 91
E+ I + H +++K GCC L +Y + D L +
Sbjct: 82 QEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQ 141
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH-- 149
+ M+YLH + HRD+ + N+LLD+ K+ +FG ++AV + H +V
Sbjct: 142 QICEGMAYLHAQHYI---HRDLAARNVLLDNDRLVKIGDFGL--AKAVPEGHEXYRVRED 196
Query: 150 -------------GTFGYLNPDDVCSFGVVLVELLT 172
+ + DV SFGV L ELLT
Sbjct: 197 GDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 31/161 (19%)
Query: 44 FINEVVIQSQINHINVVKLIGCCLETK-------YMHD-------QNKELPFTWEMQLRI 89
F+ E I Q +H N+++L G ++K YM + + + FT + +
Sbjct: 91 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 150
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
+ M YL + + HRD+ + NIL++ KVS+FG SR D T
Sbjct: 151 LRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 207
Query: 150 GTF-------------GYLNPDDVCSFGVVLVELLT-GAKP 176
G + + DV S+G+VL E+++ G +P
Sbjct: 208 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 80/191 (41%), Gaps = 54/191 (28%)
Query: 28 QGGQDIVYKGMAKVEK-----FINEVVIQSQINHINVVKLIGCCLETKYMHD-------- 74
+ G+ +V K + + ++ F+ EV + + H NV+K IG + K ++
Sbjct: 33 ETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGG 92
Query: 75 ------QNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKV 128
++ + + W ++ + + + M+YLH S+ I HRD+ S N L+ + V
Sbjct: 93 TLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVV 149
Query: 129 SNFGTSRSRAVDQTHITTQVHGTFGYLNPD----------------------------DV 160
++FG +R VD+ TQ G PD DV
Sbjct: 150 ADFGLARL-MVDE---KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDV 205
Query: 161 CSFGVVLVELL 171
SFG+VL E++
Sbjct: 206 FSFGIVLCEII 216
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 66/164 (40%), Gaps = 32/164 (19%)
Query: 41 VEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELP--------------FTWEMQ 86
++ FI EV ++H N+++L G L T M + P F
Sbjct: 59 MDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTL 117
Query: 87 LRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITT 146
R +++ + M YL S HRD+ + N+LL + K+ +FG R+ + H
Sbjct: 118 SRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 174
Query: 147 QVHGT--FGYLNPD-----------DVCSFGVVLVELLT-GAKP 176
Q H F + P+ D FGV L E+ T G +P
Sbjct: 175 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 66/164 (40%), Gaps = 32/164 (19%)
Query: 41 VEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELP--------------FTWEMQ 86
++ FI EV ++H N+++L G L T M + P F
Sbjct: 55 MDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTL 113
Query: 87 LRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITT 146
R +++ + M YL S HRD+ + N+LL + K+ +FG R+ + H
Sbjct: 114 SRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVM 170
Query: 147 QVHGT--FGYLNPD-----------DVCSFGVVLVELLT-GAKP 176
Q H F + P+ D FGV L E+ T G +P
Sbjct: 171 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 51/206 (24%)
Query: 19 SFNVNRILGQGGQDIVY-------------KGMAKVEKFIN-EVVIQSQINHINVVKLIG 64
S+ +++G G +VY K + + ++F N E+ I +++H N+V+L
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 114
Query: 65 CCLETKYMHDQ---NKELPFTWEMQLRISIEASG-------------------TMSYLHL 102
+ D+ N L + E R++ S +++Y+H
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 173
Query: 103 SASVPIYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITT----------QVHGT 151
S I HRDIK N+LLD D K+ +FG+++ + +++ + G
Sbjct: 174 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 231
Query: 152 FGYLNPDDVCSFGVVLVELLTGAKPI 177
Y + DV S G VL ELL G +PI
Sbjct: 232 TDYTSSIDVWSAGCVLAELLLG-QPI 256
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 66/164 (40%), Gaps = 32/164 (19%)
Query: 41 VEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELP--------------FTWEMQ 86
++ FI EV ++H N+++L G L T M + P F
Sbjct: 55 MDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTL 113
Query: 87 LRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITT 146
R +++ + M YL S HRD+ + N+LL + K+ +FG R+ + H
Sbjct: 114 SRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 170
Query: 147 QVHGT--FGYLNPD-----------DVCSFGVVLVELLT-GAKP 176
Q H F + P+ D FGV L E+ T G +P
Sbjct: 171 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 66/164 (40%), Gaps = 32/164 (19%)
Query: 41 VEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELP--------------FTWEMQ 86
++ FI EV ++H N+++L G L T M + P F
Sbjct: 55 MDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTL 113
Query: 87 LRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITT 146
R +++ + M YL S HRD+ + N+LL + K+ +FG R+ + H
Sbjct: 114 SRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 170
Query: 147 QVHGT--FGYLNPD-----------DVCSFGVVLVELLT-GAKP 176
Q H F + P+ D FGV L E+ T G +P
Sbjct: 171 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 66/164 (40%), Gaps = 32/164 (19%)
Query: 41 VEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELP--------------FTWEMQ 86
++ FI EV ++H N+++L G L T M + P F
Sbjct: 59 MDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTL 117
Query: 87 LRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITT 146
R +++ + M YL S HRD+ + N+LL + K+ +FG R+ + H
Sbjct: 118 SRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 174
Query: 147 QVHGT--FGYLNPD-----------DVCSFGVVLVELLT-GAKP 176
Q H F + P+ D FGV L E+ T G +P
Sbjct: 175 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 51/206 (24%)
Query: 19 SFNVNRILGQGGQDIVY-------------KGMAKVEKFIN-EVVIQSQINHINVVKLIG 64
S+ +++G G +VY K + + ++F N E+ I +++H N+V+L
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 118
Query: 65 CCLETKYMHDQ---NKELPFTWEMQLRISIEASG-------------------TMSYLHL 102
+ D+ N L + E R++ S +++Y+H
Sbjct: 119 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 177
Query: 103 SASVPIYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHIT----------TQVHGT 151
S I HRDIK N+LLD D K+ +FG+++ + +++ + G
Sbjct: 178 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 235
Query: 152 FGYLNPDDVCSFGVVLVELLTGAKPI 177
Y + DV S G VL ELL G +PI
Sbjct: 236 TDYTSSIDVWSAGCVLAELLLG-QPI 260
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 51/206 (24%)
Query: 19 SFNVNRILGQGGQDIVY-------------KGMAKVEKFIN-EVVIQSQINHINVVKLIG 64
S+ +++G G +VY K + + ++F N E+ I +++H N+V+L
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 116
Query: 65 CCLETKYMHDQ---NKELPFTWEMQLRISIEASG-------------------TMSYLHL 102
+ D+ N L + E R++ S +++Y+H
Sbjct: 117 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 175
Query: 103 SASVPIYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHIT----------TQVHGT 151
S I HRDIK N+LLD D K+ +FG+++ + +++ + G
Sbjct: 176 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 233
Query: 152 FGYLNPDDVCSFGVVLVELLTGAKPI 177
Y + DV S G VL ELL G +PI
Sbjct: 234 TDYTSSIDVWSAGCVLAELLLG-QPI 258
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 88 RISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
R + A+ + L S I +RD+K NILLD K+++FG + + T +
Sbjct: 120 RATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNE 178
Query: 148 VHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPI 177
GT Y+ P+ D SFGV+L E+L G P
Sbjct: 179 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 111/295 (37%), Gaps = 89/295 (30%)
Query: 24 RILGQGGQDIVYKGM-------------AKV----------EKFINEVVIQSQINHINVV 60
++LG G VYKG+ KV ++ ++E + + + V
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 61 KLIGCCLETKYMHDQNKELPF--------------------TWEMQLRISIEASGTMSYL 100
+L+G CL T + + +P+ W MQ+ A G MSYL
Sbjct: 83 RLLGICL-TSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI-----AKG-MSYL 135
Query: 101 HLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG------- 153
V + HRD+ + N+L+ K+++FG +R +D+ T+ H G
Sbjct: 136 E---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE----TEYHADGGKVPIKWM 188
Query: 154 ---------YLNPDDVCSFGVVLVELLT-GAKPIRFTTFEEDKN---------------I 188
+ + DV S+GV + EL+T GAKP E + I
Sbjct: 189 ALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTI 248
Query: 189 TVAKHAKRCLNPSGKKRPAMKEVASELAGIKAWNGASNVMEEGILGRAPTVGGTF 243
V +C + RP +E+ SE + + V++ LG A + TF
Sbjct: 249 DVYMIMVKCWMIDSECRPRFRELVSEFSRMARDPQRFVVIQNEDLGPASPLDSTF 303
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 51/206 (24%)
Query: 19 SFNVNRILGQGGQDIVY-------------KGMAKVEKFIN-EVVIQSQINHINVVKLIG 64
S+ +++G G +VY K + + ++F N E+ I +++H N+V+L
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 114
Query: 65 CCLETKYMHDQ---NKELPFTWEMQLRISIEASG-------------------TMSYLHL 102
+ D+ N L + E R++ S +++Y+H
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 173
Query: 103 SASVPIYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHIT----------TQVHGT 151
S I HRDIK N+LLD D K+ +FG+++ + +++ + G
Sbjct: 174 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 231
Query: 152 FGYLNPDDVCSFGVVLVELLTGAKPI 177
Y + DV S G VL ELL G +PI
Sbjct: 232 TDYTSSIDVWSAGCVLAELLLG-QPI 256
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 51/206 (24%)
Query: 19 SFNVNRILGQGGQDIVY-------------KGMAKVEKFIN-EVVIQSQINHINVVKLIG 64
S+ +++G G +VY K + + ++F N E+ I +++H N+V+L
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 92
Query: 65 CCLETKYMHDQ---NKELPFTWEMQLRISIEASG-------------------TMSYLHL 102
+ D+ N L + E R++ S +++Y+H
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 151
Query: 103 SASVPIYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITT----------QVHGT 151
S I HRDIK N+LLD D K+ +FG+++ + +++ + G
Sbjct: 152 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 209
Query: 152 FGYLNPDDVCSFGVVLVELLTGAKPI 177
Y + DV S G VL ELL G +PI
Sbjct: 210 TDYTSSIDVWSAGCVLAELLLG-QPI 234
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 51/206 (24%)
Query: 19 SFNVNRILGQGGQDIVY-------------KGMAKVEKFIN-EVVIQSQINHINVVKLIG 64
S+ +++G G +VY K + + ++F N E+ I +++H N+V+L
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 159
Query: 65 CCLETKYMHDQ---NKELPFTWEMQLRISIEASG-------------------TMSYLHL 102
+ D+ N L + E R++ S +++Y+H
Sbjct: 160 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 218
Query: 103 SASVPIYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHIT----------TQVHGT 151
S I HRDIK N+LLD D K+ +FG+++ + +++ + G
Sbjct: 219 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 276
Query: 152 FGYLNPDDVCSFGVVLVELLTGAKPI 177
Y + DV S G VL ELL G +PI
Sbjct: 277 TDYTSSIDVWSAGCVLAELLLG-QPI 301
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 51/206 (24%)
Query: 19 SFNVNRILGQGGQDIVY-------------KGMAKVEKFIN-EVVIQSQINHINVVKLIG 64
S+ +++G G +VY K + + ++F N E+ I +++H N+V+L
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 108
Query: 65 CCLETKYMHDQ---NKELPFTWEMQLRISIEASG-------------------TMSYLHL 102
+ D+ N L + E R++ S +++Y+H
Sbjct: 109 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 167
Query: 103 SASVPIYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHIT----------TQVHGT 151
S I HRDIK N+LLD D K+ +FG+++ + +++ + G
Sbjct: 168 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 225
Query: 152 FGYLNPDDVCSFGVVLVELLTGAKPI 177
Y + DV S G VL ELL G +PI
Sbjct: 226 TDYTSSIDVWSAGCVLAELLLG-QPI 250
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 35/163 (21%)
Query: 44 FINEVVIQSQINHINVVKLIGCCLETK----------------YMHDQNKELPFTWEMQL 87
F+ E I Q +H N+++L G ++K ++ + + + +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 88 RISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
I ASG M YL +V HRD+ + NIL++ KVS+FG SR D T
Sbjct: 153 LRGI-ASG-MKYLSDMGAV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 148 VHGTF-------------GYLNPDDVCSFGVVLVELLT-GAKP 176
G + + DV S+G+VL E+++ G +P
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 51/206 (24%)
Query: 19 SFNVNRILGQGGQDIVY-------------KGMAKVEKFIN-EVVIQSQINHINVVKLIG 64
S+ +++G G +VY K + + ++F N E+ I +++H N+V+L
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 88
Query: 65 CCLETKYMHDQ---NKELPFTWEMQLRISIEASG-------------------TMSYLHL 102
+ D+ N L + E R++ S +++Y+H
Sbjct: 89 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 147
Query: 103 SASVPIYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITT----------QVHGT 151
S I HRDIK N+LLD D K+ +FG+++ + +++ + G
Sbjct: 148 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 205
Query: 152 FGYLNPDDVCSFGVVLVELLTGAKPI 177
Y + DV S G VL ELL G +PI
Sbjct: 206 TDYTSSIDVWSAGCVLAELLLG-QPI 230
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 46/185 (24%)
Query: 44 FINEVVIQSQI-NHINVVKLIGCC------------------LETKYMHDQNKELPF--- 81
++E+ I I +H+NVV L+G C L T +N+ +P+
Sbjct: 78 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTP 137
Query: 82 --------TWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGT 133
T E + S + + M +L AS HRD+ + NILL +K K+ +FG
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 134 SRSRAVDQTHITT-QVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPIRFT 180
+R D + ++ P+ DV SFGV+L E+ + GA P
Sbjct: 195 ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254
Query: 181 TFEED 185
+E+
Sbjct: 255 KIDEE 259
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 76/186 (40%), Gaps = 47/186 (25%)
Query: 44 FINEVVIQSQI-NHINVVKLIGCC------------------LETKYMHDQNKELPF--- 81
++E+ I I +H+NVV L+G C L T +N+ +P+
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 82 ---------TWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFG 132
T E + S + + M +L AS HRD+ + NILL +K K+ +FG
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFG 184
Query: 133 TSRSRAVDQTHITT-QVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPIRF 179
+R D + ++ P+ DV SFGV+L E+ + GA P
Sbjct: 185 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
Query: 180 TTFEED 185
+E+
Sbjct: 245 VKIDEE 250
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 19/100 (19%)
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLD---DKYCAKVSNFGTSRSRAVDQTHITTQV 148
+ S + YLH + I HRD+K NI+L + K+ + G ++ +DQ + T+
Sbjct: 130 DISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE--LDQGELCTEF 184
Query: 149 HGTFGYLNPD-----------DVCSFGVVLVELLTGAKPI 177
GT YL P+ D SFG + E +TG +P
Sbjct: 185 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 19/100 (19%)
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLD---DKYCAKVSNFGTSRSRAVDQTHITTQV 148
+ S + YLH + I HRD+K NI+L + K+ + G ++ +DQ + T+
Sbjct: 129 DISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE--LDQGELCTEF 183
Query: 149 HGTFGYLNPD-----------DVCSFGVVLVELLTGAKPI 177
GT YL P+ D SFG + E +TG +P
Sbjct: 184 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 51/201 (25%)
Query: 20 FNVNRILGQGGQDIVYKGMAK----------------VEKFINEVVIQSQINHINVVKLI 63
F+V LG+G VYK + K +++ I E+ I Q + +VVK
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYY 90
Query: 64 GCCLE----------------TKYMHDQNKELPFTWEMQLRISIEAS-GTMSYLHLSASV 106
G + + + +NK L E ++ ++++ + YLH +
Sbjct: 91 GSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLT---EDEIATILQSTLKGLEYLHFMRKI 147
Query: 107 PIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
HRDIK+ NILL+ + AK+++FG + + D V GT ++ P+
Sbjct: 148 ---HRDIKAGNILLNTEGHAKLADFGVA-GQLTDXMAKRNXVIGTPFWMAPEVIQEIGYN 203
Query: 159 ---DVCSFGVVLVELLTGAKP 176
D+ S G+ +E+ G P
Sbjct: 204 CVADIWSLGITAIEMAEGKPP 224
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 51/206 (24%)
Query: 19 SFNVNRILGQGGQDIVY-------------KGMAKVEKFIN-EVVIQSQINHINVVKLIG 64
S+ +++G G +VY K + + ++F N E+ I +++H N+V+L
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 92
Query: 65 CCLETKYMHDQ---NKELPFTWEMQLRISIEASG-------------------TMSYLHL 102
+ D+ N L + E R++ S +++Y+H
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 151
Query: 103 SASVPIYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITT----------QVHGT 151
S I HRDIK N+LLD D K+ +FG+++ + +++ + G
Sbjct: 152 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 209
Query: 152 FGYLNPDDVCSFGVVLVELLTGAKPI 177
Y + DV S G VL ELL G +PI
Sbjct: 210 TDYTSSIDVWSAGCVLAELLLG-QPI 234
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 76/186 (40%), Gaps = 47/186 (25%)
Query: 44 FINEVVIQSQI-NHINVVKLIGCC------------------LETKYMHDQNKELPF--- 81
++E+ I I +H+NVV L+G C L T +N+ +P+
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 82 ---------TWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFG 132
T E + S + + M +L AS HRD+ + NILL +K K+ +FG
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFG 184
Query: 133 TSRSRAVDQTHITT-QVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPIRF 179
+R D + ++ P+ DV SFGV+L E+ + GA P
Sbjct: 185 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
Query: 180 TTFEED 185
+E+
Sbjct: 245 VKIDEE 250
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 76/186 (40%), Gaps = 47/186 (25%)
Query: 44 FINEVVIQSQI-NHINVVKLIGCC------------------LETKYMHDQNKELPF--- 81
++E+ I I +H+NVV L+G C L T +N+ +P+
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 82 ---------TWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFG 132
T E + S + + M +L AS HRD+ + NILL +K K+ +FG
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFG 193
Query: 133 TSRSRAVDQTHITT-QVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPIRF 179
+R D + ++ P+ DV SFGV+L E+ + GA P
Sbjct: 194 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Query: 180 TTFEED 185
+E+
Sbjct: 254 VKIDEE 259
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 51/206 (24%)
Query: 19 SFNVNRILGQGGQDIVY-------------KGMAKVEKFIN-EVVIQSQINHINVVKLIG 64
S+ +++G G +VY K + + ++F N E+ I +++H N+V+L
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 99
Query: 65 CCLETKYMHDQ---NKELPFTWEMQLRISIEASG-------------------TMSYLHL 102
+ D+ N L + E R++ S +++Y+H
Sbjct: 100 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 158
Query: 103 SASVPIYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITT----------QVHGT 151
S I HRDIK N+LLD D K+ +FG+++ + +++ + G
Sbjct: 159 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 216
Query: 152 FGYLNPDDVCSFGVVLVELLTGAKPI 177
Y + DV S G VL ELL G +PI
Sbjct: 217 TDYTSSIDVWSAGCVLAELLLG-QPI 241
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 33/162 (20%)
Query: 44 FINEVVIQSQINHINVVKLIGCCLE-------TKYMHD-------QNKELPFTWEMQLRI 89
F++E I Q +H N++ L G + T+YM + + + FT +QL
Sbjct: 62 FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT-VIQLVG 120
Query: 90 SIEASGT-MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQV 148
+ G+ M YL + + HRD+ + NIL++ KVS+FG SR D T
Sbjct: 121 MLRGIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 177
Query: 149 HGTF-------------GYLNPDDVCSFGVVLVELLT-GAKP 176
G + + DV S+G+V+ E+++ G +P
Sbjct: 178 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 22/99 (22%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYL 155
+S+LH + I HRD+K NILLDD ++S+FG S ++ ++ GT GYL
Sbjct: 212 AVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCH--LEPGEKLRELCGTPGYL 266
Query: 156 NPD-----------------DVCSFGVVLVELLTGAKPI 177
P+ D+ + GV+L LL G+ P
Sbjct: 267 APEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 51/206 (24%)
Query: 19 SFNVNRILGQGGQDIVY-------------KGMAKVEKFIN-EVVIQSQINHINVVKLIG 64
S+ +++G G +VY K + + ++F N E+ I +++H N+V+L
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 85
Query: 65 CCLETKYMHDQ---NKELPFTWEMQLRISIEASG-------------------TMSYLHL 102
+ D+ N L + E R++ S +++Y+H
Sbjct: 86 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 144
Query: 103 SASVPIYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHIT----------TQVHGT 151
S I HRDIK N+LLD D K+ +FG+++ + +++ + G
Sbjct: 145 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 202
Query: 152 FGYLNPDDVCSFGVVLVELLTGAKPI 177
Y + DV S G VL ELL G +PI
Sbjct: 203 TDYTSSIDVWSAGCVLAELLLG-QPI 227
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 51/206 (24%)
Query: 19 SFNVNRILGQGGQDIVY-------------KGMAKVEKFIN-EVVIQSQINHINVVKLIG 64
S+ +++G G +VY K + + ++F N E+ I +++H N+V+L
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 84
Query: 65 CCLETKYMHDQ---NKELPFTWEMQLRISIEASG-------------------TMSYLHL 102
+ D+ N L + E R++ S +++Y+H
Sbjct: 85 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 143
Query: 103 SASVPIYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITT----------QVHGT 151
S I HRDIK N+LLD D K+ +FG+++ + +++ + G
Sbjct: 144 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 201
Query: 152 FGYLNPDDVCSFGVVLVELLTGAKPI 177
Y + DV S G VL ELL G +PI
Sbjct: 202 TDYTSSIDVWSAGCVLAELLLG-QPI 226
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 34/167 (20%)
Query: 37 GMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYMHDQNKELPFTWEMQLR-- 88
G E F+ E I ++ H +V+L E T+YM ++ L F + + R
Sbjct: 44 GTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEEPIYIVTEYM-NKGSLLDFLKDGEGRAL 102
Query: 89 -------ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR------ 135
++ + + M+Y+ + HRD++S NIL+ + K+++FG +R
Sbjct: 103 KLPNLVDMAAQVAAGMAYIERMNYI---HRDLRSANILVGNGLICKIADFGLARLIEDNE 159
Query: 136 -------SRAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELLTGAK 175
+ T ++G F DV SFG++L EL+T +
Sbjct: 160 XTARQGAKFPIKWTAPEAALYGRFTI--KSDVWSFGILLTELVTKGR 204
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 31/161 (19%)
Query: 44 FINEVVIQSQINHINVVKLIGCCLETK-------YMHD-------QNKELPFTWEMQLRI 89
F+ E I Q +H N+++L G ++K YM + + + FT + +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
+ M YL + + HRD+ + NIL++ KVS+FG +R D T
Sbjct: 153 LRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRG 209
Query: 150 GTF-------------GYLNPDDVCSFGVVLVELLT-GAKP 176
G + + DV S+G+VL E+++ G +P
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 33/162 (20%)
Query: 44 FINEVVIQSQINHINVVKLIGCCLE-------TKYMHD-------QNKELPFTWEMQLRI 89
F++E I Q +H N++ L G + T+YM + + + FT +QL
Sbjct: 56 FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT-VIQLVG 114
Query: 90 SIEASGT-MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQV 148
+ G+ M YL + + HRD+ + NIL++ KVS+FG SR D T
Sbjct: 115 MLRGIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 171
Query: 149 HGTF-------------GYLNPDDVCSFGVVLVELLT-GAKP 176
G + + DV S+G+V+ E+++ G +P
Sbjct: 172 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 23/136 (16%)
Query: 59 VVKLIGCCLETKYMHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNI 118
++L+G C E Q P + ++++ + YL V HRD+K +NI
Sbjct: 102 AMELMGTCAEKLKKRMQG---PIPERILGKMTVAIVKALYYLKEKHGV--IHRDVKPSNI 156
Query: 119 LLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD----------------DVCS 162
LLD++ K+ +FG S R VD + G Y+ P+ DV S
Sbjct: 157 LLDERGQIKLCDFGIS-GRLVDD-KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWS 214
Query: 163 FGVVLVELLTGAKPIR 178
G+ LVEL TG P +
Sbjct: 215 LGISLVELATGQFPYK 230
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 91/224 (40%), Gaps = 53/224 (23%)
Query: 14 EKATDSFNVNRILGQGGQDIVY------------------KGMAK---VEKFINEVVIQS 52
EK D F V +LG+G VY K M K V++ NEV I
Sbjct: 8 EKIED-FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHC 66
Query: 53 QINHINVVKLIGCCLETKYMH---------DQNKEL-----PFTWEMQLRISIEASGTMS 98
Q+ H ++++L ++ Y++ + N+ L PF+ + M
Sbjct: 67 QLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGML 126
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFG-TSRSRAVDQTHITTQVHGTFGYLNP 157
YLH S I HRD+ +N+LL K+++FG ++ + + H T + GT Y++P
Sbjct: 127 YLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISP 181
Query: 158 D-----------DVCSFGVVLVELLTGAKPIRFTTFEEDKNITV 190
+ DV S G + LL G P T + N V
Sbjct: 182 EIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV 225
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 73/188 (38%), Gaps = 53/188 (28%)
Query: 39 AKVEKFINEVVIQSQINHINVVKLIGCCLE----------TKY----------------- 71
+++ ++E + Q+NH +V+KL G C + KY
Sbjct: 68 SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 72 ----------MHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLD 121
D E T + + + S M YL A + + HRD+ + NIL+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVA 184
Query: 122 DKYCAKVSNFGTSRSRAVDQTHIT----------TQVHGTFG--YLNPDDVCSFGVVLVE 169
+ K+S+FG SR + +++ + F Y DV SFGV+L E
Sbjct: 185 EGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 170 LLT-GAKP 176
++T G P
Sbjct: 245 IVTLGGNP 252
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 51/206 (24%)
Query: 19 SFNVNRILGQGGQDIVY-------------KGMAKVEKFIN-EVVIQSQINHINVVKLIG 64
S+ +++G G +VY K + + ++F N E+ I +++H N+V+L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 65 CCLETKYMHDQ---NKELPFTWEMQLRISIEASG-------------------TMSYLHL 102
+ D+ N L + E R++ S +++Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 139
Query: 103 SASVPIYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITT----------QVHGT 151
S I HRDIK N+LLD D K+ +FG+++ + +++ + G
Sbjct: 140 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 197
Query: 152 FGYLNPDDVCSFGVVLVELLTGAKPI 177
Y + DV S G VL ELL G +PI
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLG-QPI 222
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 51/206 (24%)
Query: 19 SFNVNRILGQGGQDIVY-------------KGMAKVEKFIN-EVVIQSQINHINVVKLIG 64
S+ +++G G +VY K + + ++F N E+ I +++H N+V+L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 65 CCLETKYMHDQ---NKELPFTWEMQLRISIEASG-------------------TMSYLHL 102
+ D+ N L + E R++ S +++Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 139
Query: 103 SASVPIYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITT----------QVHGT 151
S I HRDIK N+LLD D K+ +FG+++ + +++ + G
Sbjct: 140 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 197
Query: 152 FGYLNPDDVCSFGVVLVELLTGAKPI 177
Y + DV S G VL ELL G +PI
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLG-QPI 222
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 51/206 (24%)
Query: 19 SFNVNRILGQGGQDIVY-------------KGMAKVEKFIN-EVVIQSQINHINVVKLIG 64
S+ +++G G +VY K + + ++F N E+ I +++H N+V+L
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 81
Query: 65 CCLETKYMHDQ---NKELPFTWEMQLRISIEASG-------------------TMSYLHL 102
+ D+ N L + E R++ S +++Y+H
Sbjct: 82 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 140
Query: 103 SASVPIYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITT----------QVHGT 151
S I HRDIK N+LLD D K+ +FG+++ + +++ + G
Sbjct: 141 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 198
Query: 152 FGYLNPDDVCSFGVVLVELLTGAKPI 177
Y + DV S G VL ELL G +PI
Sbjct: 199 TDYTSSIDVWSAGCVLAELLLG-QPI 223
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 51/206 (24%)
Query: 19 SFNVNRILGQGGQDIVY-------------KGMAKVEKFIN-EVVIQSQINHINVVKLIG 64
S+ +++G G +VY K + + ++F N E+ I +++H N+V+L
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 93
Query: 65 CCLETKYMHDQ---NKELPFTWEMQLRISIEASG-------------------TMSYLHL 102
+ D+ N L + E R++ S +++Y+H
Sbjct: 94 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 152
Query: 103 SASVPIYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHIT----------TQVHGT 151
S I HRDIK N+LLD D K+ +FG+++ + +++ + G
Sbjct: 153 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 210
Query: 152 FGYLNPDDVCSFGVVLVELLTGAKPI 177
Y + DV S G VL ELL G +PI
Sbjct: 211 TDYTSSIDVWSAGCVLAELLLG-QPI 235
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 89/233 (38%), Gaps = 59/233 (25%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCCLETK-------YMH--DQNKEL------------- 79
+ F E + + + H ++V+ G C E + YM D N+ L
Sbjct: 88 QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGG 147
Query: 80 ------PFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGT 133
P L ++ + + M YL A + HRD+ + N L+ K+ +FG
Sbjct: 148 EDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGM 204
Query: 134 SRS-RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKP-IRF 179
SR + D + + ++ P+ DV SFGVVL E+ T G +P +
Sbjct: 205 SRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL 264
Query: 180 TTFEEDKNITVAKHAKR--------------CLNPSGKKRPAMKEVASELAGI 218
+ E IT + +R C ++R ++K+V + L +
Sbjct: 265 SNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 317
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 76/186 (40%), Gaps = 47/186 (25%)
Query: 44 FINEVVIQSQI-NHINVVKLIGCC------------------LETKYMHDQNKELPF--- 81
++E+ I I +H+NVV L+G C L T +N+ +P+
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 82 ---------TWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFG 132
T E + S + + M +L AS HRD+ + NILL +K K+ +FG
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFG 193
Query: 133 TSRSRAVDQTHITT-QVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPIRF 179
+R D + ++ P+ DV SFGV+L E+ + GA P
Sbjct: 194 LARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Query: 180 TTFEED 185
+E+
Sbjct: 254 VKIDEE 259
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 19/119 (15%)
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGT 151
E S + +LH I +RD+K NI+L+ + K+++FG + D T +T GT
Sbjct: 129 EISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCGT 184
Query: 152 FGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLN 199
Y+ P+ D S G ++ ++LTGA P FT E++ T+ K K LN
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP--FTG--ENRKKTIDKILKCKLN 239
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 62/157 (39%), Gaps = 25/157 (15%)
Query: 42 EKFINEVVIQSQINHINVVKLIGC------------CLETKYMHDQNKELPFTWEMQLRI 89
E NEVVI +H NVV + LE + D E +
Sbjct: 87 ELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATV 146
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILL---------DDKYCAKVSNFGTSRSRAVD 140
+ +SYLH + HRDIKS +ILL D +CA+VS R V
Sbjct: 147 CLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVG 203
Query: 141 QTH-ITTQVHGTFGYLNPDDVCSFGVVLVELLTGAKP 176
+ + +V Y D+ S G++++E++ G P
Sbjct: 204 TPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 31/161 (19%)
Query: 44 FINEVVIQSQINHINVVKLIGCCLETK-------YMHD-------QNKELPFTWEMQLRI 89
F+ E I Q +H N++ L G ++K YM + + + FT + +
Sbjct: 70 FLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGM 129
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
S M YL V HRD+ + NIL++ KVS+FG SR D T
Sbjct: 130 LRGISAGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 186
Query: 150 GTF-------------GYLNPDDVCSFGVVLVELLT-GAKP 176
G + + DV S+G+V+ E+++ G +P
Sbjct: 187 GKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 51/206 (24%)
Query: 19 SFNVNRILGQGGQDIVY-------------KGMAKVEKFIN-EVVIQSQINHINVVKLIG 64
S+ +++G G +VY K + + ++F N E+ I +++H N+V+L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 65 CCLETKYMHDQ---NKELPFTWEMQLRISIEASG-------------------TMSYLHL 102
+ D+ N L + E R++ S +++Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 139
Query: 103 SASVPIYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHIT----------TQVHGT 151
S I HRDIK N+LLD D K+ +FG+++ + +++ + G
Sbjct: 140 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 197
Query: 152 FGYLNPDDVCSFGVVLVELLTGAKPI 177
Y + DV S G VL ELL G +PI
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLG-QPI 222
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 51/206 (24%)
Query: 19 SFNVNRILGQGGQDIVYKG-------MAKVEKFIN-------EVVIQSQINHINVVKLIG 64
S+ +++G G +VY+ + ++K + E+ I +++H N+V+L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 65 CCLETKYMHDQ---NKELPFTWEMQLRISIEASG-------------------TMSYLHL 102
+ D+ N L + E R++ S +++Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 139
Query: 103 SASVPIYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHIT----------TQVHGT 151
S I HRDIK N+LLD D K+ +FG+++ + +++ + G
Sbjct: 140 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 197
Query: 152 FGYLNPDDVCSFGVVLVELLTGAKPI 177
Y + DV S G VL ELL G +PI
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLG-QPI 222
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 12/101 (11%)
Query: 88 RISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
R + A+ + L S I +RD+K NILLD K+++FG + + T
Sbjct: 119 RATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNX 177
Query: 148 VHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPI 177
GT Y+ P+ D SFGV+L E+L G P
Sbjct: 178 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 51/206 (24%)
Query: 19 SFNVNRILGQGGQDIVYKG-------MAKVEKFIN-------EVVIQSQINHINVVKLIG 64
S+ +++G G +VY+ + ++K + E+ I +++H N+V+L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 65 CCLETKYMHDQ---NKELPFTWEMQLRISIEASG-------------------TMSYLHL 102
+ D+ N L + E R++ S +++Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 139
Query: 103 SASVPIYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHIT----------TQVHGT 151
S I HRDIK N+LLD D K+ +FG+++ + +++ + G
Sbjct: 140 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 197
Query: 152 FGYLNPDDVCSFGVVLVELLTGAKPI 177
Y + DV S G VL ELL G +PI
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLG-QPI 222
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 31/161 (19%)
Query: 44 FINEVVIQSQINHINVVKLIGCCLETK-------YMHD-------QNKELPFTWEMQLRI 89
F+ E I Q +H N+++L G ++K YM + + + FT + +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
+ M YL + + HRD+ + NIL++ KVS+FG R D T
Sbjct: 153 LRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRG 209
Query: 150 GTF-------------GYLNPDDVCSFGVVLVELLT-GAKP 176
G + + DV S+G+VL E+++ G +P
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 19/119 (15%)
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGT 151
E S + +LH I +RD+K NI+L+ + K+++FG + D T +T GT
Sbjct: 129 EISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGT 184
Query: 152 FGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLN 199
Y+ P+ D S G ++ ++LTGA P FT E++ T+ K K LN
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP--FTG--ENRKKTIDKILKCKLN 239
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 89/233 (38%), Gaps = 59/233 (25%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCCLETK-------YMH--DQNKEL------------- 79
+ F E + + + H ++V+ G C E + YM D N+ L
Sbjct: 59 QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGG 118
Query: 80 ------PFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGT 133
P L ++ + + M YL A + HRD+ + N L+ K+ +FG
Sbjct: 119 EDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGM 175
Query: 134 SRS-RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKP-IRF 179
SR + D + + ++ P+ DV SFGVVL E+ T G +P +
Sbjct: 176 SRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL 235
Query: 180 TTFEEDKNITVAKHAKR--------------CLNPSGKKRPAMKEVASELAGI 218
+ E IT + +R C ++R ++K+V + L +
Sbjct: 236 SNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 288
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 26/135 (19%)
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGT 151
E + YLH S I +RD+K NILLD K+++FG ++ +T + GT
Sbjct: 114 EVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP----DVTYXLCGT 166
Query: 152 FGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNP 200
Y+ P+ D SFG+++ E+L G P D N K ++ LN
Sbjct: 167 PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFY------DSN--TMKTYEKILNA 218
Query: 201 SGKKRPAMKEVASEL 215
+ P E +L
Sbjct: 219 ELRFPPFFNEDVKDL 233
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 35/163 (21%)
Query: 44 FINEVVIQSQINHINVVKLIGCCLETK----------------YMHDQNKELPFTWEMQL 87
F+ E I Q +H N+++L G ++K ++ + + + +
Sbjct: 64 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGM 123
Query: 88 RISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
I ASG M YL + + HRD+ + NIL++ KVS+FG SR D T
Sbjct: 124 LRGI-ASG-MKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 148 VHGTF-------------GYLNPDDVCSFGVVLVELLT-GAKP 176
G + + DV S+G+VL E+++ G +P
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 17/91 (18%)
Query: 101 HLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-- 158
HL ++ I HRDIK +NILLD K+ +FG S + VD T+ G Y+ P+
Sbjct: 140 HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS-GQLVDSIA-KTRDAGCRPYMAPERI 197
Query: 159 -------------DVCSFGVVLVELLTGAKP 176
DV S G+ L EL TG P
Sbjct: 198 DPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 89/233 (38%), Gaps = 59/233 (25%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCCLETK-------YMH--DQNKEL------------- 79
+ F E + + + H ++V+ G C E + YM D N+ L
Sbjct: 65 QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGG 124
Query: 80 ------PFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGT 133
P L ++ + + M YL A + HRD+ + N L+ K+ +FG
Sbjct: 125 EDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGM 181
Query: 134 SRS-RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKP-IRF 179
SR + D + + ++ P+ DV SFGVVL E+ T G +P +
Sbjct: 182 SRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL 241
Query: 180 TTFEEDKNITVAKHAKR--------------CLNPSGKKRPAMKEVASELAGI 218
+ E IT + +R C ++R ++K+V + L +
Sbjct: 242 SNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 294
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 51/206 (24%)
Query: 19 SFNVNRILGQGGQDIVY-------------KGMAKVEKFIN-EVVIQSQINHINVVKL-- 62
S+ +++G G +VY K + + ++F N E+ I +++H N+V+L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 63 -IGCCLETKYMHDQNKELPFTWEMQLRISIEASG-------------------TMSYLHL 102
E K + N L + E R++ S +++Y+H
Sbjct: 81 FFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 139
Query: 103 SASVPIYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITT----------QVHGT 151
S I HRDIK N+LLD D K+ +FG+++ + +++ + G
Sbjct: 140 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 197
Query: 152 FGYLNPDDVCSFGVVLVELLTGAKPI 177
Y + DV S G VL ELL G +PI
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLG-QPI 222
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 35/163 (21%)
Query: 44 FINEVVIQSQINHINVVKLIGCCLETK----------------YMHDQNKELPFTWEMQL 87
F+ E I Q +H N+++L G ++K ++ + + + +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 88 RISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
I ASG M YL + + HRD+ + NIL++ KVS+FG SR D T
Sbjct: 153 LRGI-ASG-MKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 148 VHGTF-------------GYLNPDDVCSFGVVLVELLT-GAKP 176
G + + DV S+G+VL E+++ G +P
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 87/238 (36%), Gaps = 61/238 (25%)
Query: 41 VEKFINEVVIQSQIN-HINVVKLIGCC-----------------------------LETK 70
+ I+E+ + I H N++ L+G C LE
Sbjct: 118 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYS 177
Query: 71 YMHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSN 130
Y N E + + + + + + M YL AS HRD+ + N+L+ + K+++
Sbjct: 178 YNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIAD 234
Query: 131 FGTSRS-RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPI 177
FG +R +D TT ++ P+ DV SFGV+L E+ T G P
Sbjct: 235 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 294
Query: 178 RFTTFEEDKNITVAKH---------------AKRCLNPSGKKRPAMKEVASELAGIKA 220
EE + H + C + +RP K++ +L I A
Sbjct: 295 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 352
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 28/164 (17%)
Query: 40 KVEKFINEVVIQSQINHINVVKLIGCCLETKYMH-----DQNKEL--------PFTWEMQ 86
KV E + S+++H VKL C + + ++ +N EL F
Sbjct: 80 KVPYVTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT 139
Query: 87 LRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITT 146
+ E + YLH I HRD+K NILL++ ++++FGT++ + +
Sbjct: 140 RFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 196
Query: 147 QVH-GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIR 178
GT Y++P+ D+ + G ++ +L+ G P R
Sbjct: 197 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 240
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 94/256 (36%), Gaps = 68/256 (26%)
Query: 26 LGQGGQDIVYKGMAKV----------EKFINEVVIQSQI-NHINVVKLIG---------- 64
G G +D V K K+ E ++E+ I S + H N+V L+G
Sbjct: 68 FGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLV 127
Query: 65 ----CCLETKYMHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVP----------IYH 110
CC + K + I+ + T LH S+ V H
Sbjct: 128 ITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIH 187
Query: 111 RDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITT-QVHGTFGYLNPD----------- 158
RD+ + N+LL + + AK+ +FG +R D +I ++ P+
Sbjct: 188 RDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS 247
Query: 159 DVCSFGVVLVELLT-GAKPI-------RFTTFEED-----------KNITVAKHAKRCLN 199
DV S+G++L E+ + G P +F +D KNI A L
Sbjct: 248 DVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALE 307
Query: 200 PSGKKRPAMKEVASEL 215
P+ RP +++ S L
Sbjct: 308 PT--HRPTFQQICSFL 321
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 87/238 (36%), Gaps = 61/238 (25%)
Query: 41 VEKFINEVVIQSQI-NHINVVKLIGCC-----------------------------LETK 70
+ I+E+ + I H N++ L+G C LE
Sbjct: 69 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYS 128
Query: 71 YMHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSN 130
Y N E + + + + + + M YL AS HRD+ + N+L+ + K+++
Sbjct: 129 YNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIAD 185
Query: 131 FGTSRS-RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPI 177
FG +R +D TT ++ P+ DV SFGV+L E+ T G P
Sbjct: 186 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 245
Query: 178 RFTTFEEDKNITVAKH---------------AKRCLNPSGKKRPAMKEVASELAGIKA 220
EE + H + C + +RP K++ +L I A
Sbjct: 246 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 303
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 87/238 (36%), Gaps = 61/238 (25%)
Query: 41 VEKFINEVVIQSQI-NHINVVKLIGCC-----------------------------LETK 70
+ I+E+ + I H N++ L+G C LE
Sbjct: 77 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYS 136
Query: 71 YMHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSN 130
Y N E + + + + + + M YL AS HRD+ + N+L+ + K+++
Sbjct: 137 YNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIAD 193
Query: 131 FGTSRS-RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPI 177
FG +R +D TT ++ P+ DV SFGV+L E+ T G P
Sbjct: 194 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
Query: 178 RFTTFEEDKNITVAKH---------------AKRCLNPSGKKRPAMKEVASELAGIKA 220
EE + H + C + +RP K++ +L I A
Sbjct: 254 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 87/238 (36%), Gaps = 61/238 (25%)
Query: 41 VEKFINEVVIQSQI-NHINVVKLIGCC-----------------------------LETK 70
+ I+E+ + I H N++ L+G C LE
Sbjct: 77 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYS 136
Query: 71 YMHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSN 130
Y N E + + + + + + M YL AS HRD+ + N+L+ + K+++
Sbjct: 137 YNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIAD 193
Query: 131 FGTSRS-RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPI 177
FG +R +D TT ++ P+ DV SFGV+L E+ T G P
Sbjct: 194 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
Query: 178 RFTTFEEDKNITVAKH---------------AKRCLNPSGKKRPAMKEVASELAGIKA 220
EE + H + C + +RP K++ +L I A
Sbjct: 254 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 31/161 (19%)
Query: 44 FINEVVIQSQINHINVVKLIGCCLETK-------YMHD-------QNKELPFTWEMQLRI 89
F+ E I Q +H NVV L G K +M + + + FT + +
Sbjct: 91 FLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGM 150
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
+ M YL A + HRD+ + NIL++ KVS+FG SR D + T
Sbjct: 151 LRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTG 207
Query: 150 GTF-------------GYLNPDDVCSFGVVLVELLT-GAKP 176
G + + DV S+G+V+ E+++ G +P
Sbjct: 208 GKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 40/170 (23%)
Query: 37 GMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYMHD------------QNKE 78
G E F+ E + +I H +V+L E T+YM +
Sbjct: 53 GTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLR 112
Query: 79 LPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
LP +M +I ASG M+Y+ V HRD+++ NIL+ + KV++FG +R
Sbjct: 113 LPQLVDMAAQI---ASG-MAYVERMNYV---HRDLRAANILVGENLVCKVADFGL--ARL 163
Query: 139 VDQTHITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
++ T + F + P+ DV SFG++L EL T +
Sbjct: 164 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 70/168 (41%), Gaps = 36/168 (21%)
Query: 37 GMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYMHD------------QNKE 78
G E F+ E + ++ H +V+L E T+YM+ +
Sbjct: 50 GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLR 109
Query: 79 LPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFG------ 132
LP +M +I ASG M+Y+ V HRD+++ NIL+ + KV++FG
Sbjct: 110 LPQLVDMSAQI---ASG-MAYVERMNYV---HRDLRAANILVGENLVCKVADFGLARLIE 162
Query: 133 ----TSRSRAVDQTHITTQVHGTFGYLN-PDDVCSFGVVLVELLTGAK 175
T+R A T +G DV SFG++L EL T +
Sbjct: 163 DNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 86/235 (36%), Gaps = 61/235 (25%)
Query: 44 FINEVVIQSQI-NHINVVKLIGCC-----------------------------LETKYMH 73
I+E+ + I H N++ L+G C LE Y
Sbjct: 69 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNP 128
Query: 74 DQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGT 133
N E + + + + + + M YL AS HRD+ + N+L+ + K+++FG
Sbjct: 129 SHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGL 185
Query: 134 SRS-RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPIRFT 180
+R +D TT ++ P+ DV SFGV+L E+ T G P
Sbjct: 186 ARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 245
Query: 181 TFEEDKNITVAKH---------------AKRCLNPSGKKRPAMKEVASELAGIKA 220
EE + H + C + +RP K++ +L I A
Sbjct: 246 PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 300
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 22/153 (14%)
Query: 37 GMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYM----------HDQNKELP 80
G VE F+ E + + H +VKL + T++M D+ + P
Sbjct: 217 GSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQP 276
Query: 81 FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVD 140
+ S + + M+++ + HRD+++ NIL+ K+++FG +R A
Sbjct: 277 LP--KLIDFSAQIAEGMAFIEQRNYI---HRDLRAANILVSASLVCKIADFGLARVGAKF 331
Query: 141 QTHITTQVHGTFG-YLNPDDVCSFGVVLVELLT 172
T FG + DV SFG++L+E++T
Sbjct: 332 PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 87/238 (36%), Gaps = 61/238 (25%)
Query: 41 VEKFINEVVIQSQI-NHINVVKLIGCC-----------------------------LETK 70
+ I+E+ + I H N++ L+G C LE
Sbjct: 70 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYS 129
Query: 71 YMHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSN 130
Y N E + + + + + + M YL AS HRD+ + N+L+ + K+++
Sbjct: 130 YNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIAD 186
Query: 131 FGTSRS-RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPI 177
FG +R +D TT ++ P+ DV SFGV+L E+ T G P
Sbjct: 187 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 246
Query: 178 RFTTFEEDKNITVAKH---------------AKRCLNPSGKKRPAMKEVASELAGIKA 220
EE + H + C + +RP K++ +L I A
Sbjct: 247 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 304
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 40/170 (23%)
Query: 37 GMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYMHD------------QNKE 78
G E F+ E + ++ H +V+L E T+YM+ +
Sbjct: 50 GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLR 109
Query: 79 LPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
LP +M +I ASG M+Y+ V HRD+++ NIL+ + KV++FG +R
Sbjct: 110 LPQLVDMSAQI---ASG-MAYVERMNYV---HRDLRAANILVGENLVCKVADFGL--ARL 160
Query: 139 VDQTHITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
++ T + F + P+ DV SFG++L EL T +
Sbjct: 161 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 86/242 (35%), Gaps = 68/242 (28%)
Query: 39 AKVEKFINEVVIQSQINHINVVKLIGCCLE----------TKY----------------- 71
+++ ++E + Q+NH +V+KL G C + KY
Sbjct: 68 SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 72 ----------MHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLD 121
D E T + + + S M YL A + + HRD+ + NIL+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVA 184
Query: 122 DKYCAKVSNFGTSRSRAVDQTHIT----------TQVHGTFG--YLNPDDVCSFGVVLVE 169
+ K+S+FG SR + + + + F Y DV SFGV+L E
Sbjct: 185 EGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 170 LLT-GAKPIRFTTFEEDKNITVAKHAK---------------RCLNPSGKKRPAMKEVAS 213
++T G P E N+ H +C KRP +++
Sbjct: 245 IVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISK 304
Query: 214 EL 215
+L
Sbjct: 305 DL 306
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 19/87 (21%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD--------- 158
I HRD+K NILLDD K+++FG S +D +V GT YL P+
Sbjct: 132 IVHRDLKPENILLDDDMNIKLTDFGFSCQ--LDPGEKLREVCGTPSYLAPEIIECSMNDN 189
Query: 159 --------DVCSFGVVLVELLTGAKPI 177
D+ S GV++ LL G+ P
Sbjct: 190 HPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 40/170 (23%)
Query: 37 GMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYMHD------------QNKE 78
G E F+ E + ++ H +V+L E T+YM +
Sbjct: 302 GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLR 361
Query: 79 LPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
LP +M +I ASG M+Y+ V HRD+++ NIL+ + KV++FG +R
Sbjct: 362 LPQLVDMAAQI---ASG-MAYVERMNYV---HRDLRAANILVGENLVCKVADFGL--ARL 412
Query: 139 VDQTHITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
++ T + F + P+ DV SFG++L EL T +
Sbjct: 413 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 462
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 72/188 (38%), Gaps = 53/188 (28%)
Query: 39 AKVEKFINEVVIQSQINHINVVKLIGCCLE----------TKY----------------- 71
+++ ++E + Q+NH +V+KL G C + KY
Sbjct: 68 SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 72 ----------MHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLD 121
D E T + + + S M YL A + + HRD+ + NIL+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVA 184
Query: 122 DKYCAKVSNFGTSRSRAVDQTHIT----------TQVHGTFG--YLNPDDVCSFGVVLVE 169
+ K+S+FG SR + + + + F Y DV SFGV+L E
Sbjct: 185 EGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 170 LLT-GAKP 176
++T G P
Sbjct: 245 IVTLGGNP 252
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 16/115 (13%)
Query: 88 RISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
++SI ++YL I HRD+K +NIL++ + K+ +FG S + +D +
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-GQLIDS--MANS 162
Query: 148 VHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVA 191
GT Y++P+ D+ S G+ LVE+ G PI +ED +A
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMA 217
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 67/158 (42%), Gaps = 27/158 (17%)
Query: 42 EKFINEVVIQSQINHINVVK-----LIGCCLETKYMHDQNKELPFTWEMQLRISIEASGT 96
E NEVVI H NVV+ L+G L Q L Q+R++ E T
Sbjct: 87 ELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS-QVRLNEEQIAT 145
Query: 97 --------MSYLHLSASVPIYHRDIKSTNILL---------DDKYCAKVSNFGTSRSRAV 139
++YLH + HRDIKS +ILL D +CA++S R V
Sbjct: 146 VCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV 202
Query: 140 DQTH-ITTQVHGTFGYLNPDDVCSFGVVLVELLTGAKP 176
+ + +V Y D+ S G++++E++ G P
Sbjct: 203 GTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 19/87 (21%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD--------- 158
I HRD+K NILLDD K+++FG S +D +V GT YL P+
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFSCQ--LDPGEKLREVCGTPSYLAPEIIECSMNDN 202
Query: 159 --------DVCSFGVVLVELLTGAKPI 177
D+ S GV++ LL G+ P
Sbjct: 203 HPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 38/158 (24%)
Query: 47 EVVIQSQINHINVVKLIGCCLET------------------KYM-HDQNKELPFTWEMQL 87
E+ I + H N+VK G C E +Y+ ++NK + QL
Sbjct: 73 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK---INLKQQL 129
Query: 88 RISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
+ +++ M YL S HRD+ + N+L++ ++ K+ +FG +++ D+ T +
Sbjct: 130 KYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVK 186
Query: 148 --VHGTFGYLNPD-----------DVCSFGVVLVELLT 172
+ P+ DV SFGV L ELLT
Sbjct: 187 DDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 85/220 (38%), Gaps = 44/220 (20%)
Query: 37 GMAKVEKFINEVVIQSQINHINVVKLIGCC------LETKYM-------HDQNKELPFTW 83
G + + ++ ++H ++V+L+G C L T+Y+ H +
Sbjct: 55 GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGP 114
Query: 84 EMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH 143
++ L ++ + M YL V HR++ + N+LL +V++FG + D
Sbjct: 115 QLLLNWGVQIAKGMYYLEEHGMV---HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 171
Query: 144 ITTQVHGT-----------FG-YLNPDDVCSFGVVLVELLT-GAKPIRFTTFEEDKN--- 187
+ T FG Y + DV S+GV + EL+T GA+P E +
Sbjct: 172 LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE 231
Query: 188 ------------ITVAKHAKRCLNPSGKKRPAMKEVASEL 215
I V +C RP KE+A+E
Sbjct: 232 KGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEF 271
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 61/154 (39%), Gaps = 30/154 (19%)
Query: 46 NEVVIQSQINHINVVKLIGCC---------LETKY-----MHDQNKELPFTWEMQLRISI 91
E+ I + H +++K GCC L +Y + D L +
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQ 124
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHG- 150
+ M+YLH + HR++ + N+LLD+ K+ +FG +++ + + G
Sbjct: 125 QICEGMAYLHAQHYI---HRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD 181
Query: 151 ------------TFGYLNPDDVCSFGVVLVELLT 172
+ + DV SFGV L ELLT
Sbjct: 182 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 85/220 (38%), Gaps = 44/220 (20%)
Query: 37 GMAKVEKFINEVVIQSQINHINVVKLIGCC------LETKYM-------HDQNKELPFTW 83
G + + ++ ++H ++V+L+G C L T+Y+ H +
Sbjct: 73 GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGP 132
Query: 84 EMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH 143
++ L ++ + M YL V HR++ + N+LL +V++FG + D
Sbjct: 133 QLLLNWGVQIAKGMYYLEEHGMV---HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 189
Query: 144 ITTQVHGT-----------FG-YLNPDDVCSFGVVLVELLT-GAKPIRFTTFEEDKN--- 187
+ T FG Y + DV S+GV + EL+T GA+P E +
Sbjct: 190 LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE 249
Query: 188 ------------ITVAKHAKRCLNPSGKKRPAMKEVASEL 215
I V +C RP KE+A+E
Sbjct: 250 KGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEF 289
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 38/158 (24%)
Query: 47 EVVIQSQINHINVVKLIGCCLET------------------KYM-HDQNKELPFTWEMQL 87
E+ I + H N+VK G C E +Y+ ++NK + QL
Sbjct: 61 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK---INLKQQL 117
Query: 88 RISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
+ +++ M YL S HRD+ + N+L++ ++ K+ +FG +++ D+ T +
Sbjct: 118 KYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVK 174
Query: 148 --VHGTFGYLNPD-----------DVCSFGVVLVELLT 172
+ P+ DV SFGV L ELLT
Sbjct: 175 DDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 40/170 (23%)
Query: 37 GMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYMHD------------QNKE 78
G E F+ E + ++ H +V+L E T+YM +
Sbjct: 44 GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLR 103
Query: 79 LPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
LP +M +I ASG M+Y+ V HRD+++ NIL+ + KV++FG +R
Sbjct: 104 LPQLVDMAAQI---ASG-MAYVERMNYV---HRDLRAANILVGENLVCKVADFGL--ARL 154
Query: 139 VDQTHITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
++ T + F + P+ DV SFG++L EL T +
Sbjct: 155 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 204
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 40/170 (23%)
Query: 37 GMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYMHD------------QNKE 78
G E F+ E + ++ H +V+L E T+YM +
Sbjct: 46 GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLR 105
Query: 79 LPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
LP +M +I ASG M+Y+ V HRD+++ NIL+ + KV++FG +R
Sbjct: 106 LPQLVDMAAQI---ASG-MAYVERMNYV---HRDLRAANILVGENLVCKVADFGL--ARL 156
Query: 139 VDQTHITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
++ T + F + P+ DV SFG++L EL T +
Sbjct: 157 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 206
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
+ E S + +LH I +RD+K N++LD + K+++FG + +D T +
Sbjct: 126 AAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV-TTREFC 181
Query: 150 GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEEDK 186
GT Y+ P+ D ++GV+L E+L G P F +ED+
Sbjct: 182 GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPP--FDGEDEDE 227
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 64/159 (40%), Gaps = 30/159 (18%)
Query: 47 EVVIQSQINHINVVKLIGCCLETKYMHDQNKELP---------FTW----EMQLRISIEA 93
E+ + + H N+V+ +G E ++ +++P W + + I
Sbjct: 69 EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT 128
Query: 94 SGTMSYLHLSASVPIYHRDIKSTNILLDDKYCA--KVSNFGTSRSRAVDQTHITTQVHGT 151
+ L I HRDIK N+L+ + Y K+S+FGTS+ R T GT
Sbjct: 129 KQILEGLKYLHDNQIVHRDIKGDNVLI-NTYSGVLKISDFGTSK-RLAGINPCTETFTGT 186
Query: 152 FGYLNPD-------------DVCSFGVVLVELLTGAKPI 177
Y+ P+ D+ S G ++E+ TG P
Sbjct: 187 LQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 40/170 (23%)
Query: 37 GMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYMHD------------QNKE 78
G E F+ E + ++ H +V+L E T+YM +
Sbjct: 42 GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLR 101
Query: 79 LPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
LP +M +I ASG M+Y+ V HRD+++ NIL+ + KV++FG +R
Sbjct: 102 LPQLVDMAAQI---ASG-MAYVERMNYV---HRDLRAANILVGENLVCKVADFGL--ARL 152
Query: 139 VDQTHITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
++ T + F + P+ DV SFG++L EL T +
Sbjct: 153 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 202
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 69/168 (41%), Gaps = 36/168 (21%)
Query: 37 GMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYMHD------------QNKE 78
G E F+ E + ++ H +V+L E T+YM +
Sbjct: 43 GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLR 102
Query: 79 LPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFG------ 132
LP +M +I ASG M+Y+ V HRD+++ NIL+ + KV++FG
Sbjct: 103 LPQLVDMAAQI---ASG-MAYVERMNYV---HRDLRAANILVGENLVCKVADFGLARLIE 155
Query: 133 ----TSRSRAVDQTHITTQVHGTFGYLN-PDDVCSFGVVLVELLTGAK 175
T+R A T +G DV SFG++L EL T +
Sbjct: 156 DNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 203
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 66/170 (38%), Gaps = 41/170 (24%)
Query: 44 FINEVVIQSQINHINVVKLIGCCLET-------KYMH--DQNKEL--------------- 79
F E + + + H ++VK G C+E +YM D NK L
Sbjct: 62 FHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNP 121
Query: 80 --PFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS- 136
T L I+ + + M YL AS HRD+ + N L+ + K+ +FG SR
Sbjct: 122 PTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDV 178
Query: 137 RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLTGAK 175
+ D + ++ P+ DV S GVVL E+ T K
Sbjct: 179 YSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGK 228
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 89/218 (40%), Gaps = 48/218 (22%)
Query: 1 TIKKTKLFISNELEKATDSFNVNRILGQGGQDIV----YKGMAKV------------EKF 44
T K K + +E E ++ + LG G V Y G KV + F
Sbjct: 2 TQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAF 61
Query: 45 INEVVIQSQINHINVVKLIGCCLE------TKYMHDQN--------KELPFTWEMQLRIS 90
+ E + Q+ H +V+L + T+YM + + + T L ++
Sbjct: 62 LAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 121
Query: 91 IEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHG 150
+ + M+++ + HRD+++ NIL+ D K+++FG +R ++ T +
Sbjct: 122 AQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGL--ARLIEDNEXTAREGA 176
Query: 151 TF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
F + P+ DV SFG++L E++T +
Sbjct: 177 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 89/218 (40%), Gaps = 48/218 (22%)
Query: 1 TIKKTKLFISNELEKATDSFNVNRILGQGGQDIV----YKGMAKV------------EKF 44
T K K + +E E ++ + LG G V Y G KV + F
Sbjct: 4 TQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAF 63
Query: 45 INEVVIQSQINHINVVKLIGCCLE------TKYMHDQN--------KELPFTWEMQLRIS 90
+ E + Q+ H +V+L + T+YM + + + T L ++
Sbjct: 64 LAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 123
Query: 91 IEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHG 150
+ + M+++ + HRD+++ NIL+ D K+++FG +R ++ T +
Sbjct: 124 AQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGL--ARLIEDNEXTAREGA 178
Query: 151 TF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
F + P+ DV SFG++L E++T +
Sbjct: 179 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 216
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 89/218 (40%), Gaps = 48/218 (22%)
Query: 1 TIKKTKLFISNELEKATDSFNVNRILGQGGQDIV----YKGMAKV------------EKF 44
T K K + +E E ++ + LG G V Y G KV + F
Sbjct: 6 TQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAF 65
Query: 45 INEVVIQSQINHINVVKLIGCCLE------TKYMHDQN--------KELPFTWEMQLRIS 90
+ E + Q+ H +V+L + T+YM + + + T L ++
Sbjct: 66 LAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 125
Query: 91 IEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHG 150
+ + M+++ + HRD+++ NIL+ D K+++FG +R ++ T +
Sbjct: 126 AQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGL--ARLIEDNEYTAREGA 180
Query: 151 TF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
F + P+ DV SFG++L E++T +
Sbjct: 181 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 218
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 40/170 (23%)
Query: 37 GMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYMHD------------QNKE 78
G E F+ E + ++ H +V+L E T+YM +
Sbjct: 53 GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLR 112
Query: 79 LPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
LP +M +I ASG M+Y+ V HRD+++ NIL+ + KV++FG +R
Sbjct: 113 LPQLVDMAAQI---ASG-MAYVERMNYV---HRDLRAANILVGENLVCKVADFGL--ARL 163
Query: 139 VDQTHITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
++ T + F + P+ DV SFG++L EL T +
Sbjct: 164 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 30/141 (21%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLN 156
+ YLH + HRDIK+ N+LL + K+++FG + Q T V GT ++
Sbjct: 117 LDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMA 172
Query: 157 PD-----------DVCSFGVVLVELLTGAKP--------IRFT-------TFEEDKNITV 190
P+ D+ S G+ +EL G P + F T E + + +
Sbjct: 173 PEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPL 232
Query: 191 AKHAKRCLNPSGKKRPAMKEV 211
+ + CLN RP KE+
Sbjct: 233 KEFVEACLNKEPSFRPTAKEL 253
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 28/158 (17%)
Query: 47 EVVIQSQINHINVVKLIGCCLETKYMHDQNKELP---------FTW----EMQLRISIEA 93
E+ + + H N+V+ +G E ++ +++P W + + I
Sbjct: 55 EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT 114
Query: 94 SGTMSYLHLSASVPIYHRDIKSTNILLDD-KYCAKVSNFGTSRSRAVDQTHITTQVHGTF 152
+ L I HRDIK N+L++ K+S+FGTS+ R T GT
Sbjct: 115 KQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSK-RLAGINPCTETFTGTL 173
Query: 153 GYLNPD-------------DVCSFGVVLVELLTGAKPI 177
Y+ P+ D+ S G ++E+ TG P
Sbjct: 174 QYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 15/99 (15%)
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
+ E + + YLH S+ I +RD+K NILLD + +++FG + ++ T+
Sbjct: 145 AAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKEN-IEHNSTTSTFC 200
Query: 150 GTFGYLNPD-----------DVCSFGVVLVELLTGAKPI 177
GT YL P+ D G VL E+L G P
Sbjct: 201 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 36 KGMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYMHDQN--------KELPF 81
+G + F+ E + Q+ H +V+L + T+YM + + +
Sbjct: 47 QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKL 106
Query: 82 TWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQ 141
T L ++ + + M+++ + HRD+++ NIL+ D K+++FG +R ++
Sbjct: 107 TINKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGL--ARLIED 161
Query: 142 THITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
T + F + P+ DV SFG++L E++T +
Sbjct: 162 AEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 72/177 (40%), Gaps = 51/177 (28%)
Query: 44 FINEVVIQSQI-NHINVVKLIGCCLETKYMHDQNKELP-------------FTWEMQLRI 89
F E+ + ++ +H N++ L+G C Y++ + P + I
Sbjct: 72 FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAI 131
Query: 90 SIEASGTMS---YLHLSASVP----------IYHRDIKSTNILLDDKYCAKVSNFGTSRS 136
+ + T+S LH +A V HRD+ + NIL+ + Y AK+++FG SR
Sbjct: 132 ANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG 191
Query: 137 RAVDQTHITTQVHGTFG----------------YLNPDDVCSFGVVLVELLT-GAKP 176
+ V V T G Y DV S+GV+L E+++ G P
Sbjct: 192 QEV-------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 241
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 87/238 (36%), Gaps = 61/238 (25%)
Query: 41 VEKFINEVVIQSQI-NHINVVKLIGCC-----------------------------LETK 70
+ I+E+ + I H N++ L+G C LE
Sbjct: 62 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYC 121
Query: 71 YMHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSN 130
Y N E + + + + + + M YL AS HRD+ + N+L+ + K+++
Sbjct: 122 YNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIAD 178
Query: 131 FGTSRS-RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPI 177
FG +R +D TT ++ P+ DV SFGV+L E+ T G P
Sbjct: 179 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 238
Query: 178 RFTTFEEDKNITVAKH---------------AKRCLNPSGKKRPAMKEVASELAGIKA 220
EE + H + C + +RP K++ +L I A
Sbjct: 239 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 296
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 16/105 (15%)
Query: 84 EMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH 143
E+ ++SI ++YL I HRD+K +NIL++ + K+ +FG S + +D
Sbjct: 114 EILGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS-GQLIDS-- 168
Query: 144 ITTQVHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPI 177
+ GT Y+ P+ D+ S G+ LVEL G PI
Sbjct: 169 MANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
+ E + YLH I HRD+K NILL++ ++++FGT++ + +
Sbjct: 116 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 172
Query: 150 -GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIR 178
GT Y++P+ D+ + G ++ +L+ G P R
Sbjct: 173 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 213
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 89/218 (40%), Gaps = 48/218 (22%)
Query: 1 TIKKTKLFISNELEKATDSFNVNRILGQGGQDIV----YKGMAKV------------EKF 44
T K K + +E E ++ + LG G V Y G KV + F
Sbjct: 1 TQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAF 60
Query: 45 INEVVIQSQINHINVVKLIGCCLE------TKYMHDQN--------KELPFTWEMQLRIS 90
+ E + Q+ H +V+L + T+YM + + + T L ++
Sbjct: 61 LAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 120
Query: 91 IEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHG 150
+ + M+++ + HRD+++ NIL+ D K+++FG +R ++ T +
Sbjct: 121 AQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGL--ARLIEDNEYTAREGA 175
Query: 151 TF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
F + P+ DV SFG++L E++T +
Sbjct: 176 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 213
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 40/170 (23%)
Query: 37 GMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYMHD------------QNKE 78
G E F+ E + ++ H +V+L E T+YM +
Sbjct: 219 GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLR 278
Query: 79 LPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
LP +M +I ASG M+Y+ V HRD+++ NIL+ + KV++FG +R
Sbjct: 279 LPQLVDMAAQI---ASG-MAYVERMNYV---HRDLRAANILVGENLVCKVADFGL--ARL 329
Query: 139 VDQTHITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
++ T + F + P+ DV SFG++L EL T +
Sbjct: 330 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 87/238 (36%), Gaps = 61/238 (25%)
Query: 41 VEKFINEVVIQSQI-NHINVVKLIGCC-----------------------------LETK 70
+ I+E+ + I H N++ L+G C LE
Sbjct: 77 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFS 136
Query: 71 YMHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSN 130
+ N E + + + + + + M YL AS HRD+ + N+L+ + K+++
Sbjct: 137 FNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIAD 193
Query: 131 FGTSRS-RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPI 177
FG +R +D TT ++ P+ DV SFGV+L E+ T G P
Sbjct: 194 FGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
Query: 178 RFTTFEEDKNITVAKH---------------AKRCLNPSGKKRPAMKEVASELAGIKA 220
EE + H + C + +RP K++ +L I A
Sbjct: 254 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
+ E + YLH I HRD+K NILL++ ++++FGT++ + +
Sbjct: 115 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 171
Query: 150 -GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIR 178
GT Y++P+ D+ + G ++ +L+ G P R
Sbjct: 172 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 212
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 88 RISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
++SI ++YL I HRD+K +NIL++ + K+ +FG S + +D +
Sbjct: 135 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-GQLIDS--MANS 189
Query: 148 VHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPI 177
GT Y++P+ D+ S G+ LVE+ G PI
Sbjct: 190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 72/177 (40%), Gaps = 51/177 (28%)
Query: 44 FINEVVIQSQI-NHINVVKLIGCCLETKYMHDQNKELP-------------FTWEMQLRI 89
F E+ + ++ +H N++ L+G C Y++ + P + I
Sbjct: 62 FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAI 121
Query: 90 SIEASGTMS---YLHLSASVP----------IYHRDIKSTNILLDDKYCAKVSNFGTSRS 136
+ + T+S LH +A V HRD+ + NIL+ + Y AK+++FG SR
Sbjct: 122 ANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG 181
Query: 137 RAVDQTHITTQVHGTFG----------------YLNPDDVCSFGVVLVELLT-GAKP 176
+ V V T G Y DV S+GV+L E+++ G P
Sbjct: 182 QEV-------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 231
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 89/218 (40%), Gaps = 48/218 (22%)
Query: 1 TIKKTKLFISNELEKATDSFNVNRILGQGGQDIV----YKGMAKV------------EKF 44
T K K + +E E ++ + LG G V Y G KV + F
Sbjct: 2 TQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAF 61
Query: 45 INEVVIQSQINHINVVKLIGCCLE------TKYMHDQN--------KELPFTWEMQLRIS 90
+ E + Q+ H +V+L + T+YM + + + T L ++
Sbjct: 62 LAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 121
Query: 91 IEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHG 150
+ + M+++ + HRD+++ NIL+ D K+++FG +R ++ T +
Sbjct: 122 AQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGL--ARLIEDNEYTAREGA 176
Query: 151 TF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
F + P+ DV SFG++L E++T +
Sbjct: 177 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 40/170 (23%)
Query: 37 GMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYMHD------------QNKE 78
G E F+ E + ++ H +V+L E T+YM +
Sbjct: 219 GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLR 278
Query: 79 LPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
LP +M +I ASG M+Y+ V HRD+++ NIL+ + KV++FG +R
Sbjct: 279 LPQLVDMAAQI---ASG-MAYVERMNYV---HRDLRAANILVGENLVCKVADFGL--ARL 329
Query: 139 VDQTHITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
++ T + F + P+ DV SFG++L EL T +
Sbjct: 330 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 36 KGMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYMHDQN--------KELPF 81
+G + F+ E + Q+ H +V+L + T+YM + + +
Sbjct: 47 QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKL 106
Query: 82 TWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQ 141
T L ++ + + M+++ + HRD+++ NIL+ D K+++FG +R ++
Sbjct: 107 TINKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGL--ARLIED 161
Query: 142 THITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
T + F + P+ DV SFG++L E++T +
Sbjct: 162 NEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 40/170 (23%)
Query: 37 GMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYMHD------------QNKE 78
G E F+ E + ++ H +V+L E T+YM +
Sbjct: 53 GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLR 112
Query: 79 LPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
LP +M +I ASG M+Y+ V HRD+++ NIL+ + KV++FG +R
Sbjct: 113 LPQLVDMAAQI---ASG-MAYVERMNYV---HRDLRAANILVGENLVCKVADFGL--ARL 163
Query: 139 VDQTHITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
++ T + F + P+ DV SFG++L EL T +
Sbjct: 164 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 63/156 (40%), Gaps = 34/156 (21%)
Query: 46 NEVVIQSQINHINVVKLIGCC---------LETKY-----MHDQNKELPFTWEMQLRISI 91
E+ I + H +++K GCC L +Y + D L +
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQ 124
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH-- 149
+ M+YLH + HR++ + N+LLD+ K+ +FG ++AV + H +V
Sbjct: 125 QICEGMAYLHSQHYI---HRNLAARNVLLDNDRLVKIGDFGL--AKAVPEGHEYYRVRED 179
Query: 150 -------------GTFGYLNPDDVCSFGVVLVELLT 172
+ + DV SFGV L ELLT
Sbjct: 180 GDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 15/96 (15%)
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGT 151
E + +LH S + HRDIKS NILL K+++FG +Q+ +T V GT
Sbjct: 124 ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GT 179
Query: 152 FGYLNPD-----------DVCSFGVVLVELLTGAKP 176
++ P+ D+ S G++ +E++ G P
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 30/141 (21%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLN 156
+ YLH + HRDIK+ N+LL + K+++FG + Q T V GT ++
Sbjct: 137 LDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMA 192
Query: 157 PD-----------DVCSFGVVLVELLTGAKP--------IRFT-------TFEEDKNITV 190
P+ D+ S G+ +EL G P + F T E + + +
Sbjct: 193 PEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPL 252
Query: 191 AKHAKRCLNPSGKKRPAMKEV 211
+ + CLN RP KE+
Sbjct: 253 KEFVEACLNKEPSFRPTAKEL 273
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
+ E + YLH I HRD+K NILL++ ++++FGT++ + +
Sbjct: 136 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAF 192
Query: 150 -GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIR 178
GT Y++P+ D+ + G ++ +L+ G P R
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 233
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 88 RISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
++SI ++YL I HRD+K +NIL++ + K+ +FG S + +D +
Sbjct: 170 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-GQLIDS--MANS 224
Query: 148 VHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPI 177
GT Y++P+ D+ S G+ LVE+ G PI
Sbjct: 225 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 93/256 (36%), Gaps = 68/256 (26%)
Query: 26 LGQGGQDIVYKGMAKV----------EKFINEVVIQSQI-NHINVVKLIG---------- 64
G G +D V K K+ E ++E+ I S + H N+V L+G
Sbjct: 68 FGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLV 127
Query: 65 ----CCLETKYMHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVP----------IYH 110
CC + K + I+ T LH S+ V H
Sbjct: 128 ITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIH 187
Query: 111 RDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITT-QVHGTFGYLNPD----------- 158
RD+ + N+LL + + AK+ +FG +R D +I ++ P+
Sbjct: 188 RDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS 247
Query: 159 DVCSFGVVLVELLT-GAKPI-------RFTTFEED-----------KNITVAKHAKRCLN 199
DV S+G++L E+ + G P +F +D KNI A L
Sbjct: 248 DVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALE 307
Query: 200 PSGKKRPAMKEVASEL 215
P+ RP +++ S L
Sbjct: 308 PT--HRPTFQQICSFL 321
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 36 KGMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYMHDQN--------KELPF 81
+G + F+ E + Q+ H +V+L + T+YM + + +
Sbjct: 56 QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKL 115
Query: 82 TWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQ 141
T L ++ + + M+++ + HRD+++ NIL+ D K+++FG +R ++
Sbjct: 116 TINKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGL--ARLIED 170
Query: 142 THITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
T + F + P+ DV SFG++L E++T +
Sbjct: 171 NEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 217
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 51/206 (24%)
Query: 19 SFNVNRILGQGGQDIVYKG-------MAKVEKFIN-------EVVIQSQINHINVVKLIG 64
S+ +++G G +VY+ + ++K + E+ I +++H N+V+L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 65 CCLETKYMHDQ---NKELPFTWEMQLRISIEASG-------------------TMSYLHL 102
+ D+ N L + R++ S +++Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 139
Query: 103 SASVPIYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITT----------QVHGT 151
S I HRDIK N+LLD D K+ +FG+++ + +++ + G
Sbjct: 140 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 197
Query: 152 FGYLNPDDVCSFGVVLVELLTGAKPI 177
Y + DV S G VL ELL G +PI
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLG-QPI 222
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 61/157 (38%), Gaps = 25/157 (15%)
Query: 42 EKFINEVVIQSQINHINVVKLIGC------------CLETKYMHDQNKELPFTWEMQLRI 89
E NEVVI H NVV++ LE + D E +
Sbjct: 193 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAV 252
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILL---------DDKYCAKVSNFGTSRSRAVD 140
+ +S LH + HRDIKS +ILL D +CA+VS R V
Sbjct: 253 CLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 309
Query: 141 QTH-ITTQVHGTFGYLNPDDVCSFGVVLVELLTGAKP 176
+ + ++ Y D+ S G++++E++ G P
Sbjct: 310 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 87/238 (36%), Gaps = 61/238 (25%)
Query: 41 VEKFINEVVIQSQI-NHINVVKLIGCC-----------------------------LETK 70
+ I+E+ + I H N++ L+G C LE
Sbjct: 77 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYC 136
Query: 71 YMHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSN 130
Y N E + + + + + + M YL AS HRD+ + N+L+ + K+++
Sbjct: 137 YNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIAD 193
Query: 131 FGTSRS-RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPI 177
FG +R +D TT ++ P+ DV SFGV+L E+ T G P
Sbjct: 194 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
Query: 178 RFTTFEEDKNITVAKH---------------AKRCLNPSGKKRPAMKEVASELAGIKA 220
EE + H + C + +RP K++ +L I A
Sbjct: 254 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 15/99 (15%)
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH-G 150
E + YLH I HRD+K NILL++ ++++FGT++ + + G
Sbjct: 116 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 172
Query: 151 TFGYLNPD-----------DVCSFGVVLVELLTGAKPIR 178
T Y++P+ D+ + G ++ +L+ G P R
Sbjct: 173 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 211
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 19/87 (21%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD--------- 158
I HRD+K NILLDD K+++FG S +D V GT YL P+
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFSCQ--LDPGEKLRSVCGTPSYLAPEIIECSMNDN 202
Query: 159 --------DVCSFGVVLVELLTGAKPI 177
D+ S GV++ LL G+ P
Sbjct: 203 HPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 17/102 (16%)
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR--SRAVDQTHITTQ 147
+ E + YLH I HRD+K NILL++ ++++FGT++ S Q +
Sbjct: 139 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 195
Query: 148 VHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPIR 178
V GT Y++P+ D+ + G ++ +L+ G P R
Sbjct: 196 V-GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 236
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
+ E + YLH I HRD+K NILL++ ++++FGT++ + +
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 150 -GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIR 178
GT Y++P+ D+ + G ++ +L+ G P R
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 15/99 (15%)
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH-G 150
E + YLH I HRD+K NILL++ ++++FGT++ + + G
Sbjct: 115 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 171
Query: 151 TFGYLNPD-----------DVCSFGVVLVELLTGAKPIR 178
T Y++P+ D+ + G ++ +L+ G P R
Sbjct: 172 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 210
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 36/157 (22%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 57 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 110
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V T +
Sbjct: 111 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 170
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLT 172
V T Y P+ D+ S G + E++T
Sbjct: 171 V-VTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 31/132 (23%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD--------- 158
+ HRD+K N+ LD K K+ +FG +R D + T V GT Y++P+
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNRMSYNE 195
Query: 159 --DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAK-----------------RCLN 199
D+ S G +L EL P FT F + + + K R LN
Sbjct: 196 KSDIWSLGCLLYELCALMPP--FTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLN 253
Query: 200 PSGKKRPAMKEV 211
RP+++E+
Sbjct: 254 LKDYHRPSVEEI 265
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 36 KGMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYMHDQN--------KELPF 81
+G + F+ E + Q+ H +V+L + T+YM + + +
Sbjct: 49 QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKL 108
Query: 82 TWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQ 141
T L ++ + + M+++ + HRD+++ NIL+ D K+++FG +R ++
Sbjct: 109 TINKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGL--ARLIED 163
Query: 142 THITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
T + F + P+ DV SFG++L E++T +
Sbjct: 164 NEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 210
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
+ E + YLH I HRD+K NILL++ ++++FGT++ + +
Sbjct: 139 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 195
Query: 150 -GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIR 178
GT Y++P+ D+ + G ++ +L+ G P R
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 236
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 36/157 (22%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 57 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 110
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V T +
Sbjct: 111 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 170
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLT 172
V T Y P+ D+ S G + E++T
Sbjct: 171 V-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 206
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 17/102 (16%)
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR--SRAVDQTHITTQ 147
+ E + YLH I HRD+K NILL++ ++++FGT++ S Q +
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 194
Query: 148 VHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPIR 178
V GT Y++P+ D+ + G ++ +L+ G P R
Sbjct: 195 V-GTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 33/163 (20%)
Query: 44 FINEVVIQSQINHINVVKLIGCCLE-------TKYMHD-------QNKELPFTWEMQLRI 89
F++E I Q +H NV+ L G + T++M + + + FT + +
Sbjct: 81 FLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGM 140
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH--ITTQ 147
+ M YL A + HRD+ + NIL++ KVS+FG SR D + T+
Sbjct: 141 LRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA 197
Query: 148 VHGTF-------------GYLNPDDVCSFGVVLVELLT-GAKP 176
+ G + + DV S+G+V+ E+++ G +P
Sbjct: 198 LGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
+ E + YLH I HRD+K NILL++ ++++FGT++ + +
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 150 -GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIR 178
GT Y++P+ D+ + G ++ +L+ G P R
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 76 NKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR 135
++E FT E E + YLH S + +RDIK N++LD K+++FG +
Sbjct: 97 SRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
Query: 136 SRAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEE 184
D + T GT YL P+ D GVV+ E++ G P E
Sbjct: 154 EGISDGATMKT-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 212
Query: 185 DKNITVAKHAK--RCLNPSGK 203
+ + + + R L+P K
Sbjct: 213 LFELILMEEIRFPRTLSPEAK 233
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 88 RISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
++SI ++YL I HRD+K +NIL++ + K+ +FG S + +D+ + +
Sbjct: 111 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-GQLIDE--MANE 165
Query: 148 VHGTFGYLNPD-----------DVCSFGVVLVELLTGAKP 176
GT Y++P+ D+ S G+ LVE+ G P
Sbjct: 166 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
+ E + YLH I HRD+K NILL++ ++++FGT++ + +
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 150 -GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIR 178
GT Y++P+ D+ + G ++ +L+ G P R
Sbjct: 195 VGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
+ E + YLH I HRD+K NILL++ ++++FGT++ + +
Sbjct: 141 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 197
Query: 150 -GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIR 178
GT Y++P+ D+ + G ++ +L+ G P R
Sbjct: 198 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 238
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 36 KGMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYMHDQN--------KELPF 81
+G + F+ E + Q+ H +V+L + T+YM + + +
Sbjct: 47 QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKL 106
Query: 82 TWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQ 141
T L ++ + + M+++ + HRD+++ NIL+ D K+++FG +R ++
Sbjct: 107 TINKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGL--ARLIED 161
Query: 142 THITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
T + F + P+ DV SFG++L E++T +
Sbjct: 162 NEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
+ E + YLH I HRD+K NILL++ ++++FGT++ + +
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 150 -GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIR 178
GT Y++P+ D+ + G ++ +L+ G P R
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 36/157 (22%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 54 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 107
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V T +
Sbjct: 108 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 167
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLT 172
V T Y P+ D+ S G + E++T
Sbjct: 168 V-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 36/157 (22%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 50 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 103
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V T +
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 163
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLT 172
V T Y P+ D+ S G + E++T
Sbjct: 164 V-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 36 KGMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYMHDQN--------KELPF 81
+G + F+ E + Q+ H +V+L + T+YM + + +
Sbjct: 47 QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKL 106
Query: 82 TWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQ 141
T L ++ + + M+++ + HRD+++ NIL+ D K+++FG +R ++
Sbjct: 107 TINKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGL--ARLIED 161
Query: 142 THITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
T + F + P+ DV SFG++L E++T +
Sbjct: 162 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 36/157 (22%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 50 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 103
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V T +
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 163
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLT 172
V T Y P+ D+ S G + E++T
Sbjct: 164 V-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 36 KGMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYMHDQN--------KELPF 81
+G + F+ E + Q+ H +V+L + T+YM + + +
Sbjct: 48 QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKL 107
Query: 82 TWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQ 141
T L ++ + + M+++ + HRD+++ NIL+ D K+++FG +R ++
Sbjct: 108 TINKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGL--ARLIED 162
Query: 142 THITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
T + F + P+ DV SFG++L E++T +
Sbjct: 163 NEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 209
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 36/157 (22%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 49 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 102
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V T +
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 162
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLT 172
V T Y P+ D+ S G + E++T
Sbjct: 163 V-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 36/157 (22%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 50 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 103
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V T +
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 163
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLT 172
V T Y P+ D+ S G + E++T
Sbjct: 164 V-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
+ E + YLH I HRD+K NILL++ ++++FGT++ + +
Sbjct: 136 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 150 -GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIR 178
GT Y++P+ D+ + G ++ +L+ G P R
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 233
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 36/157 (22%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 49 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 102
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V T +
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 162
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLT 172
V T Y P+ D+ S G + E++T
Sbjct: 163 V-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
+ E + YLH I HRD+K NILL++ ++++FGT++ + +
Sbjct: 136 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 150 -GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIR 178
GT Y++P+ D+ + G ++ +L+ G P R
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 233
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 36/157 (22%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 49 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 102
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V T +
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 162
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLT 172
V T Y P+ D+ S G + E++T
Sbjct: 163 V-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
+ E + YLH I HRD+K NILL++ ++++FGT++ + +
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 150 -GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIR 178
GT Y++P+ D+ + G ++ +L+ G P R
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 36/157 (22%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 50 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 103
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V T +
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 163
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLT 172
V T Y P+ D+ S G + E++T
Sbjct: 164 V-VTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
+ E + YLH I HRD+K NILL++ ++++FGT++ + +
Sbjct: 136 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 150 -GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIR 178
GT Y++P+ D+ + G ++ +L+ G P R
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 233
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 40/159 (25%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTW-EMQLRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + M L+ ++AS
Sbjct: 53 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLSMDLKKFMDASALTGIPLP 106
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V + T
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP---VRTY 163
Query: 148 VHG--TFGYLNPD------------DVCSFGVVLVELLT 172
H T Y P+ D+ S G + E++T
Sbjct: 164 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 36/157 (22%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 51 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 104
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V T +
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 164
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLT 172
V T Y P+ D+ S G + E++T
Sbjct: 165 V-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 61/157 (38%), Gaps = 25/157 (15%)
Query: 42 EKFINEVVIQSQINHINVVKLIGC------------CLETKYMHDQNKELPFTWEMQLRI 89
E NEVVI H NVV++ LE + D E +
Sbjct: 116 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAV 175
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILL---------DDKYCAKVSNFGTSRSRAVD 140
+ +S LH + HRDIKS +ILL D +CA+VS R V
Sbjct: 176 CLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 232
Query: 141 QTH-ITTQVHGTFGYLNPDDVCSFGVVLVELLTGAKP 176
+ + ++ Y D+ S G++++E++ G P
Sbjct: 233 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 36/157 (22%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 50 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 103
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V T +
Sbjct: 104 LIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 163
Query: 148 VHGTFGYLNPD------------DVCSFGVVLVELLT 172
V T Y P+ D+ S G + E++T
Sbjct: 164 V-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 76 NKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR 135
++E FT E E + YLH S + +RDIK N++LD K+++FG +
Sbjct: 100 SRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 156
Query: 136 SRAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEE 184
D + T GT YL P+ D GVV+ E++ G P E
Sbjct: 157 EGISDGATMKT-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 215
Query: 185 DKNITVAKHAK--RCLNPSGK 203
+ + + + R L+P K
Sbjct: 216 LFELILMEEIRFPRTLSPEAK 236
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 40/159 (25%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTW-EMQLRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + M L+ ++AS
Sbjct: 51 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLSMDLKKFMDASALTGIPLP 104
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V + T
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP---VRTY 161
Query: 148 VHG--TFGYLNPD------------DVCSFGVVLVELLT 172
H T Y P+ D+ S G + E++T
Sbjct: 162 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 88 RISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
++SI ++YL I HRD+K +NIL++ + K+ +FG S + +D +
Sbjct: 127 KVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS-GQLIDS--MANS 181
Query: 148 VHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPI 177
GT Y++P+ D+ S G+ LVE+ G PI
Sbjct: 182 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 15/99 (15%)
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH-G 150
E + YLH I HRD+K NILL++ ++++FGT++ + + G
Sbjct: 122 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 178
Query: 151 TFGYLNPD-----------DVCSFGVVLVELLTGAKPIR 178
T Y++P+ D+ + G ++ +L+ G P R
Sbjct: 179 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 217
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 17/100 (17%)
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR--SRAVDQTHITTQVH 149
E + YLH I HRD+K NILL++ ++++FGT++ S Q + V
Sbjct: 137 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV- 192
Query: 150 GTFGYLNPD-----------DVCSFGVVLVELLTGAKPIR 178
GT Y++P+ D+ + G ++ +L+ G P R
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 232
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 40/159 (25%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTW-EMQLRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + M L+ ++AS
Sbjct: 53 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLSMDLKDFMDASALTGIPLP 106
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V + T
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 163
Query: 148 VHG--TFGYLNPD------------DVCSFGVVLVELLT 172
H T Y P+ D+ S G + E++T
Sbjct: 164 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 40/159 (25%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTW-EMQLRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + M L+ ++AS
Sbjct: 52 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLSMDLKDFMDASALTGIPLP 105
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V + T
Sbjct: 106 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 162
Query: 148 VHG--TFGYLNPD------------DVCSFGVVLVELLT 172
H T Y P+ D+ S G + E++T
Sbjct: 163 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 29/162 (17%)
Query: 43 KFINEVVIQSQINHINVVKLIGCC-------LETKYMH----DQNKELPFTWEMQLRISI 91
+F++E I Q H N+++L G + T++M D L +++
Sbjct: 61 EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVG 120
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR---SRAVDQTHITTQV 148
G S + A + HRD+ + NIL++ KVS+FG SR + D T+ T+ +
Sbjct: 121 MLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTY-TSSL 179
Query: 149 HGTF-------------GYLNPDDVCSFGVVLVELLT-GAKP 176
G + + D S+G+V+ E+++ G +P
Sbjct: 180 GGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 88 RISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
++SI ++YL I HRD+K +NIL++ + K+ +FG S + +D +
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-GQLIDS--MANS 162
Query: 148 VHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPI 177
GT Y++P+ D+ S G+ LVE+ G PI
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 88 RISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
++SI ++YL I HRD+K +NIL++ + K+ +FG S + +D +
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-GQLIDS--MANS 162
Query: 148 VHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPI 177
GT Y++P+ D+ S G+ LVE+ G PI
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 15/99 (15%)
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH-G 150
E + YLH I HRD+K NILL++ ++++FGT++ + + G
Sbjct: 137 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 193
Query: 151 TFGYLNPD-----------DVCSFGVVLVELLTGAKPIR 178
T Y++P+ D+ + G ++ +L+ G P R
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 232
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 36 KGMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYMHDQN--------KELPF 81
+G + F+ E + Q+ H +V+L + T+YM + + +
Sbjct: 42 QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKL 101
Query: 82 TWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQ 141
T L ++ + + M+++ + HRD+++ NIL+ D K+++FG +R ++
Sbjct: 102 TINKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGL--ARLIED 156
Query: 142 THITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
T + F + P+ DV SFG++L E++T +
Sbjct: 157 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 203
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 38/158 (24%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWE---MQLRISIEASGTM---- 97
I E+ + ++NH N+VKL+ +H +NK L +E L+ ++AS
Sbjct: 49 IREISLLKELNHPNIVKLLDV------IHTENK-LYLVFEHVHQDLKTFMDASALTGIPL 101
Query: 98 ----SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITT 146
SYL S + HRD+K N+L++ + K+++FG +R+ V T
Sbjct: 102 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 161
Query: 147 QVHGTFGYLNPD------------DVCSFGVVLVELLT 172
+V T Y P+ D+ S G + E++T
Sbjct: 162 EV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 32/168 (19%)
Query: 45 INEVVIQSQINHINVVKLIGC-----CL---------ETKYMHDQNKELPFTWEMQLRIS 90
I E+ + +++H N+V LI CL + K + D+NK T +I
Sbjct: 67 IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENK----TGLQDSQIK 122
Query: 91 IEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHG 150
I + + I HRD+K N+L++ K+++FG +R+ + T +V
Sbjct: 123 IYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEV-V 181
Query: 151 TFGYLNPD------------DVCSFGVVLVELLTGAKPIRFTTFEEDK 186
T Y PD D+ S G + E++TG KP+ ++D+
Sbjct: 182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG-KPLFPGVTDDDQ 228
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 88 RISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
++SI ++YL I HRD+K +NIL++ + K+ +FG S + +D +
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-GQLIDS--MANS 162
Query: 148 VHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPI 177
GT Y++P+ D+ S G+ LVE+ G PI
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 88 RISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
++SI ++YL I HRD+K +NIL++ + K+ +FG S + +D +
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-GQLIDS--MANS 162
Query: 148 VHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPI 177
GT Y++P+ D+ S G+ LVE+ G PI
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 76 NKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR 135
++E FT E E + YLH S + +RDIK N++LD K+++FG +
Sbjct: 97 SRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
Query: 136 SRAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEE 184
D + T GT YL P+ D GVV+ E++ G P E
Sbjct: 154 EGISDGATMKT-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 212
Query: 185 DKNITVAKHAK--RCLNPSGK 203
+ + + + R L+P K
Sbjct: 213 LFELILMEEIRFPRTLSPEAK 233
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 93/239 (38%), Gaps = 65/239 (27%)
Query: 42 EKFINEVVIQSQI-----NHINVVKLIGCCLE---------------------------T 69
EK ++++V + ++ H N++ L+G C +
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 70 KYMHDQNK--ELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAK 127
+Y +D N+ E T++ + + + + M YL AS HRD+ + N+L+ + K
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMK 197
Query: 128 VSNFGTSRS-RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GA 174
+++FG +R +D TT ++ P+ DV SFGV++ E+ T G
Sbjct: 198 IADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
Query: 175 KPIRFTTFEEDKNITVAKH---------------AKRCLNPSGKKRPAMKEVASELAGI 218
P EE + H + C + +RP K++ +L I
Sbjct: 258 SPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 15/83 (18%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD--------- 158
+ +RD+K NILLD+ ++S+ G + + + H + GT GY+ P+
Sbjct: 312 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYD 368
Query: 159 ---DVCSFGVVLVELLTGAKPIR 178
D S G +L +LL G P R
Sbjct: 369 SSADWFSLGCMLFKLLRGHSPFR 391
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 15/83 (18%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD--------- 158
+ +RD+K NILLD+ ++S+ G + + + H + GT GY+ P+
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYD 369
Query: 159 ---DVCSFGVVLVELLTGAKPIR 178
D S G +L +LL G P R
Sbjct: 370 SSADWFSLGCMLFKLLRGHSPFR 392
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 15/83 (18%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD--------- 158
+ +RD+K NILLD+ ++S+ G + + + H + GT GY+ P+
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYD 369
Query: 159 ---DVCSFGVVLVELLTGAKPIR 178
D S G +L +LL G P R
Sbjct: 370 SSADWFSLGCMLFKLLRGHSPFR 392
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 15/83 (18%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD--------- 158
+ +RD+K NILLD+ ++S+ G + + + H + GT GY+ P+
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYD 369
Query: 159 ---DVCSFGVVLVELLTGAKPIR 178
D S G +L +LL G P R
Sbjct: 370 SSADWFSLGCMLFKLLRGHSPFR 392
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 68/163 (41%), Gaps = 36/163 (22%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCCLE------TKYMHD------------QNKELPFTW 83
E F+ E + ++ H +V+L E T+YM + LP
Sbjct: 225 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV 284
Query: 84 EMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFG----------T 133
+M +I ASG M+Y+ V HRD+++ NIL+ + KV++FG T
Sbjct: 285 DMAAQI---ASG-MAYVERMNYV---HRDLRAANILVGENLVCKVADFGLGRLIEDNEYT 337
Query: 134 SRSRAVDQTHITTQVHGTFGYLN-PDDVCSFGVVLVELLTGAK 175
+R A T +G DV SFG++L EL T +
Sbjct: 338 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 380
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 40/170 (23%)
Query: 37 GMAKVEKFINEVVIQSQINHINVVKLI-----------------GCCLE-TKYMHDQNKE 78
G E F+ E + ++ H +V+L GC L+ K +
Sbjct: 53 GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLR 112
Query: 79 LPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
LP +M +I ASG M+Y+ V HRD+++ NIL+ + KV++FG +R
Sbjct: 113 LPQLVDMAAQI---ASG-MAYVERMNYV---HRDLRAANILVGENLVCKVADFGL--ARL 163
Query: 139 VDQTHITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
++ T + F + P+ DV SFG++L EL T +
Sbjct: 164 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 32/168 (19%)
Query: 45 INEVVIQSQINHINVVKLIGC-----CL---------ETKYMHDQNKELPFTWEMQLRIS 90
I E+ + +++H N+V LI CL + K + D+NK T +I
Sbjct: 67 IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENK----TGLQDSQIK 122
Query: 91 IEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHG 150
I + + I HRD+K N+L++ K+++FG +R+ + T +V
Sbjct: 123 IYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEV-V 181
Query: 151 TFGYLNPD------------DVCSFGVVLVELLTGAKPIRFTTFEEDK 186
T Y PD D+ S G + E++TG KP+ ++D+
Sbjct: 182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG-KPLFPGVTDDDQ 228
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 66/165 (40%), Gaps = 36/165 (21%)
Query: 41 VEKFINEVVIQSQINHINVVKLI------------------GCCLETKYMHDQNKELPFT 82
++K EV I +NH N+VKL G + H + KE
Sbjct: 58 LQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR 117
Query: 83 WEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT 142
+ + +S + Y H I HRD+K+ N+LLD K+++FG S V
Sbjct: 118 AKFRQIVS-----AVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNK 169
Query: 143 ---------HITTQVHGTFGYLNPD-DVCSFGVVLVELLTGAKPI 177
+ ++ Y P+ DV S GV+L L++G+ P
Sbjct: 170 LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 81 FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVD 140
T E + S + + M +L AS HRD+ + NILL +K K+ +FG +R D
Sbjct: 195 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 141 QTHITT-QVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKP 176
++ ++ P+ DV SFGV+L E+ + GA P
Sbjct: 252 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 300
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 16/118 (13%)
Query: 81 FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVD 140
T E + S + + M +L AS HRD+ + NILL +K K+ +FG +R D
Sbjct: 197 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 141 QTHITT-QVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPIRFTTFEED 185
++ ++ P+ DV SFGV+L E+ + GA P +E+
Sbjct: 254 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 311
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 81 FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVD 140
T E + S + + M +L AS HRD+ + NILL +K K+ +FG +R D
Sbjct: 190 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 141 QTHITT-QVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKP 176
++ ++ P+ DV SFGV+L E+ + GA P
Sbjct: 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 295
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 40/170 (23%)
Query: 37 GMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYMHD------------QNKE 78
G E F+ E + ++ H +V+L E T+YM +
Sbjct: 53 GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLR 112
Query: 79 LPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
LP +M +I ASG M+Y+ V HRD+ + NIL+ + KV++FG +R
Sbjct: 113 LPQLVDMAAQI---ASG-MAYVERMNYV---HRDLAAANILVGENLVCKVADFGL--ARL 163
Query: 139 VDQTHITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
++ T + F + P+ DV SFG++L EL T +
Sbjct: 164 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 14/98 (14%)
Query: 100 LHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD- 158
L S I +RD+K N++LD + K+++FG + D T GT Y+ P+
Sbjct: 455 LFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV-TTKXFCGTPDYIAPEI 513
Query: 159 ----------DVCSFGVVLVELLTGAKPIRFTTFEEDK 186
D +FGV+L E+L G P F +ED+
Sbjct: 514 IAYQPYGKSVDWWAFGVLLYEMLAGQAP--FEGEDEDE 549
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 12/90 (13%)
Query: 100 LHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD- 158
L S I +RD+K N++LD + K+++FG + D T GT Y+ P+
Sbjct: 134 LFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV-TTKXFCGTPDYIAPEI 192
Query: 159 ----------DVCSFGVVLVELLTGAKPIR 178
D +FGV+L E+L G P
Sbjct: 193 IAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 81 FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVD 140
T E + S + + M +L AS HRD+ + NILL +K K+ +FG +R D
Sbjct: 188 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 141 QTHITT-QVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKP 176
++ ++ P+ DV SFGV+L E+ + GA P
Sbjct: 245 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 293
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 57/141 (40%), Gaps = 30/141 (21%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLN 156
+ YLH + HRDIK+ N+LL ++ K+++FG + Q T V GT ++
Sbjct: 133 LDYLHSEKKI---HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMA 188
Query: 157 PD-----------DVCSFGVVLVELLTGAKP--------IRFT-------TFEEDKNITV 190
P+ D+ S G+ +EL G P + F T D +
Sbjct: 189 PEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKSF 248
Query: 191 AKHAKRCLNPSGKKRPAMKEV 211
+ CLN RP KE+
Sbjct: 249 KEFIDACLNKDPSFRPTAKEL 269
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 18/102 (17%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDD---KYCAKVSNFGTSRSRAVDQTHITTQVHGTF 152
++Y H S + H+D+K NIL D K+ +FG + D+ +T GT
Sbjct: 136 ALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH--STNAAGTA 190
Query: 153 GYLNPD----------DVCSFGVVLVELLTGAKPIRFTTFEE 184
Y+ P+ D+ S GVV+ LLTG P T+ EE
Sbjct: 191 LYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE 232
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 61/157 (38%), Gaps = 25/157 (15%)
Query: 42 EKFINEVVIQSQINHINVVKLIGC------------CLETKYMHDQNKELPFTWEMQLRI 89
E NEVVI H NVV++ LE + D E +
Sbjct: 73 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAV 132
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILL---------DDKYCAKVSNFGTSRSRAVD 140
+ +S LH + HRDIKS +ILL D +CA+VS R V
Sbjct: 133 CLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 189
Query: 141 QTH-ITTQVHGTFGYLNPDDVCSFGVVLVELLTGAKP 176
+ + ++ Y D+ S G++++E++ G P
Sbjct: 190 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 61/157 (38%), Gaps = 25/157 (15%)
Query: 42 EKFINEVVIQSQINHINVVKLIGC------------CLETKYMHDQNKELPFTWEMQLRI 89
E NEVVI H NVV++ LE + D E +
Sbjct: 71 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAV 130
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILL---------DDKYCAKVSNFGTSRSRAVD 140
+ +S LH + HRDIKS +ILL D +CA+VS R V
Sbjct: 131 CLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 187
Query: 141 QTH-ITTQVHGTFGYLNPDDVCSFGVVLVELLTGAKP 176
+ + ++ Y D+ S G++++E++ G P
Sbjct: 188 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 93/239 (38%), Gaps = 65/239 (27%)
Query: 42 EKFINEVVIQSQI-----NHINVVKLIGCCLE---------------------------T 69
EK ++++V + ++ H N++ L+G C +
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGM 140
Query: 70 KYMHDQNK--ELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAK 127
+Y +D N+ E T++ + + + + M YL AS HRD+ + N+L+ + K
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMK 197
Query: 128 VSNFGTSRS-RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GA 174
+++FG +R +D TT ++ P+ DV SFGV++ E+ T G
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
Query: 175 KPIRFTTFEEDKNITVAKH---------------AKRCLNPSGKKRPAMKEVASELAGI 218
P EE + H + C + +RP K++ +L I
Sbjct: 258 SPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 12/82 (14%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD--------- 158
I +RD+K N+LLDD ++S+ G + QT T GT G++ P+
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEYDF 368
Query: 159 --DVCSFGVVLVELLTGAKPIR 178
D + GV L E++ P R
Sbjct: 369 SVDYFALGVTLYEMIAARGPFR 390
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 12/82 (14%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD--------- 158
I +RD+K N+LLDD ++S+ G + QT T GT G++ P+
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEYDF 368
Query: 159 --DVCSFGVVLVELLTGAKPIR 178
D + GV L E++ P R
Sbjct: 369 SVDYFALGVTLYEMIAARGPFR 390
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD--------- 158
I HRD+K N+L++ + K+ +FG +R+ + +++V T Y PD
Sbjct: 129 ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEV-VTLWYRAPDVLMGSRTYS 187
Query: 159 ---DVCSFGVVLVELLTGAKPIRFTTFEEDK 186
D+ S G +L E++TG KP+ T +E++
Sbjct: 188 TSIDIWSCGCILAEMITG-KPLFPGTNDEEQ 217
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 93/239 (38%), Gaps = 65/239 (27%)
Query: 42 EKFINEVVIQSQI-----NHINVVKLIGCCLE---------------------------T 69
EK ++++V + ++ H N++ L+G C +
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGM 140
Query: 70 KYMHDQNK--ELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAK 127
+Y +D N+ E T++ + + + + M YL AS HRD+ + N+L+ + K
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMK 197
Query: 128 VSNFGTSRS-RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GA 174
+++FG +R +D TT ++ P+ DV SFGV++ E+ T G
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
Query: 175 KPIRFTTFEEDKNITVAKH---------------AKRCLNPSGKKRPAMKEVASELAGI 218
P EE + H + C + +RP K++ +L I
Sbjct: 258 SPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 12/82 (14%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD--------- 158
I +RD+K N+LLDD ++S+ G + QT T GT G++ P+
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEYDF 368
Query: 159 --DVCSFGVVLVELLTGAKPIR 178
D + GV L E++ P R
Sbjct: 369 SVDYFALGVTLYEMIAARGPFR 390
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 29/162 (17%)
Query: 43 KFINEVVIQSQINHINVVKLIGCC-------LETKYMH----DQNKELPFTWEMQLRISI 91
+F++E I Q H N+++L G + T++M D L +++
Sbjct: 63 EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVG 122
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR---SRAVDQTHITTQV 148
G S + A + HRD+ + NIL++ KVS+FG SR + D T T+ +
Sbjct: 123 MLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTE-TSSL 181
Query: 149 HGTF-------------GYLNPDDVCSFGVVLVELLT-GAKP 176
G + + D S+G+V+ E+++ G +P
Sbjct: 182 GGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 93/239 (38%), Gaps = 65/239 (27%)
Query: 42 EKFINEVVIQSQI-----NHINVVKLIGCCLE---------------------------T 69
EK ++++V + ++ H N++ L+G C +
Sbjct: 73 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 132
Query: 70 KYMHDQNK--ELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAK 127
+Y +D N+ E T++ + + + + M YL AS HRD+ + N+L+ + K
Sbjct: 133 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMK 189
Query: 128 VSNFGTSRS-RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GA 174
+++FG +R +D TT ++ P+ DV SFGV++ E+ T G
Sbjct: 190 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 249
Query: 175 KPIRFTTFEEDKNITVAKH---------------AKRCLNPSGKKRPAMKEVASELAGI 218
P EE + H + C + +RP K++ +L I
Sbjct: 250 SPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 308
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 103/250 (41%), Gaps = 54/250 (21%)
Query: 19 SFNVNRILGQGGQ-DIVYKGM-----AKVEKFINEV---------VIQSQINHINVVKL- 62
SF +LG G + IVY+GM V++ + E +++ H NV++
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYF 84
Query: 63 ------------IGCCLETKYMHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYH 110
I C T + + K+ + + + + +++LH S+ I H
Sbjct: 85 CTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVH 141
Query: 111 RDIKSTNILLD-----DKYCAKVSNFGTSRSRAVDQTHITTQ--VHGTFGYLNPD----- 158
RD+K NIL+ K A +S+FG + AV + + + V GT G++ P+
Sbjct: 142 RDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSED 201
Query: 159 ---------DVCSFGVVLVELLT-GAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
D+ S G V +++ G+ P + + NI + + CL+P +
Sbjct: 202 CKENPTYTVDIFSAGCVFYYVISEGSHPFG-KSLQRQANILLGACSLDCLHPEKHEDVIA 260
Query: 209 KEVASELAGI 218
+E+ ++ +
Sbjct: 261 RELIEKMIAM 270
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 40/159 (25%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 53 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKTFMDASALTGIPLP 106
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V + T
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 163
Query: 148 VHG--TFGYLNPD------------DVCSFGVVLVELLT 172
H T Y P+ D+ S G + E++T
Sbjct: 164 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 58/141 (41%), Gaps = 30/141 (21%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLN 156
+ YLH + HRDIK+ N+LL ++ K+++FG + Q V GT ++
Sbjct: 129 LDYLHSERKI---HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFWMA 184
Query: 157 PD-----------DVCSFGVVLVELLTGAKP--------IRFT-------TFEEDKNITV 190
P+ D+ S G+ +EL G P + F T E +
Sbjct: 185 PEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQHSKPF 244
Query: 191 AKHAKRCLNPSGKKRPAMKEV 211
+ + CLN + RP KE+
Sbjct: 245 KEFVEACLNKDPRFRPTAKEL 265
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 12/82 (14%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD--------- 158
I +RD+K N+LLDD ++S+ G + QT T GT G++ P+
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEYDF 368
Query: 159 --DVCSFGVVLVELLTGAKPIR 178
D + GV L E++ P R
Sbjct: 369 SVDYFALGVTLYEMIAARGPFR 390
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 23/117 (19%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCA--KVSNFGTSRSRAVDQTHITTQVHGTFGY 154
+SY H ++ + HRD+K N LLD K+++FG S++ +V + + V GT Y
Sbjct: 128 VSYAH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKA-SVLHSQPKSAV-GTPAY 182
Query: 155 LNPD------------DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLN 199
+ P+ DV S GV L +L GA P F EE KN H R LN
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEPKNFRKTIH--RILN 235
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 93/239 (38%), Gaps = 65/239 (27%)
Query: 42 EKFINEVVIQSQI-----NHINVVKLIGCCLE---------------------------T 69
EK ++++V + ++ H N++ L+G C +
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 70 KYMHDQNK--ELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAK 127
+Y +D N+ E T++ + + + + M YL AS HRD+ + N+L+ + K
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMK 197
Query: 128 VSNFGTSRS-RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GA 174
+++FG +R +D TT ++ P+ DV SFGV++ E+ T G
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
Query: 175 KPIRFTTFEEDKNITVAKH---------------AKRCLNPSGKKRPAMKEVASELAGI 218
P EE + H + C + +RP K++ +L I
Sbjct: 258 SPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 31/153 (20%)
Query: 45 INEVVIQSQINHINVVKLIGCCLET------KYMHDQNKELPFTWEMQLRISIEASGTMS 98
IN+++ I + V ++ +ET K H N + + LR +
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR-------GLK 138
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH--ITTQVHGTFGYLN 156
Y+H S + HRD+K +N+LL+ K+ +FG +R D H T+ T Y
Sbjct: 139 YIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 157 PD------------DVCSFGVVLVELLTGAKPI 177
P+ D+ S G +L E+L+ +PI
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 227
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 93/239 (38%), Gaps = 65/239 (27%)
Query: 42 EKFINEVVIQSQI-----NHINVVKLIGCCLE---------------------------T 69
EK ++++V + ++ H N++ L+G C +
Sbjct: 70 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 129
Query: 70 KYMHDQNK--ELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAK 127
+Y +D N+ E T++ + + + + M YL AS HRD+ + N+L+ + K
Sbjct: 130 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMK 186
Query: 128 VSNFGTSRS-RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GA 174
+++FG +R +D TT ++ P+ DV SFGV++ E+ T G
Sbjct: 187 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 246
Query: 175 KPIRFTTFEEDKNITVAKH---------------AKRCLNPSGKKRPAMKEVASELAGI 218
P EE + H + C + +RP K++ +L I
Sbjct: 247 SPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 305
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 93/239 (38%), Gaps = 65/239 (27%)
Query: 42 EKFINEVVIQSQI-----NHINVVKLIGCCLE---------------------------T 69
EK ++++V + ++ H N++ L+G C +
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 70 KYMHDQNK--ELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAK 127
+Y +D N+ E T++ + + + + M YL AS HRD+ + N+L+ + K
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMK 197
Query: 128 VSNFGTSRS-RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GA 174
+++FG +R +D TT ++ P+ DV SFGV++ E+ T G
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
Query: 175 KPIRFTTFEEDKNITVAKH---------------AKRCLNPSGKKRPAMKEVASELAGI 218
P EE + H + C + +RP K++ +L I
Sbjct: 258 SPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 89/233 (38%), Gaps = 61/233 (26%)
Query: 44 FINEVVIQSQI-NHINVVKLIGCCLE---------------------------TKYMHDQ 75
++E+ + I H N++ L+G C + +Y +D
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 146
Query: 76 NK--ELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGT 133
N+ E T++ + + + + M YL AS HRD+ + N+L+ + K+++FG
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 134 SRS-RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPIRFT 180
+R +D TT ++ P+ DV SFGV++ E+ T G P
Sbjct: 204 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
Query: 181 TFEEDKNITVAKH---------------AKRCLNPSGKKRPAMKEVASELAGI 218
EE + H + C + +RP K++ +L I
Sbjct: 264 PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 53/117 (45%), Gaps = 23/117 (19%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCA--KVSNFGTSRSRAVDQTHITTQVHGTFGY 154
+SY H ++ + HRD+K N LLD K+ +FG S+S + +T GT Y
Sbjct: 128 VSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAY 182
Query: 155 LNPD------------DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLN 199
+ P+ DV S GV L +L GA P F EE KN H R LN
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEPKNFRKTIH--RILN 235
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 93/239 (38%), Gaps = 65/239 (27%)
Query: 42 EKFINEVVIQSQI-----NHINVVKLIGCCLE---------------------------T 69
EK ++++V + ++ H N++ L+G C +
Sbjct: 68 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 127
Query: 70 KYMHDQNK--ELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAK 127
+Y +D N+ E T++ + + + + M YL AS HRD+ + N+L+ + K
Sbjct: 128 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMK 184
Query: 128 VSNFGTSRS-RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GA 174
+++FG +R +D TT ++ P+ DV SFGV++ E+ T G
Sbjct: 185 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 244
Query: 175 KPIRFTTFEEDKNITVAKH---------------AKRCLNPSGKKRPAMKEVASELAGI 218
P EE + H + C + +RP K++ +L I
Sbjct: 245 SPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 303
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 23/155 (14%)
Query: 85 MQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHI 144
+ L + + + + Y+H S + HRD+K +NI L D K+ +FG S D
Sbjct: 137 LALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR- 192
Query: 145 TTQVHGTFGYLNPD-----------DVCSFGVVLVELL----TGAKPIRFTTFEEDKNIT 189
T+ GT Y++P+ D+ + G++L ELL T + +F T D I+
Sbjct: 193 -TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIIS 251
Query: 190 --VAKHAKRCLNPSGKKRPAMKEVASE-LAGIKAW 221
K K L K+P + SE L + W
Sbjct: 252 DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW 286
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 31/153 (20%)
Query: 45 INEVVIQSQINHINVVKLIGCCLET------KYMHDQNKELPFTWEMQLRISIEASGTMS 98
IN+++ I + V ++ +ET K H N + + LR +
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR-------GLK 142
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH--ITTQVHGTFGYLN 156
Y+H S + HRD+K +N+LL+ K+ +FG +R D H T+ T Y
Sbjct: 143 YIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 157 PD------------DVCSFGVVLVELLTGAKPI 177
P+ D+ S G +L E+L+ +PI
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 93/239 (38%), Gaps = 65/239 (27%)
Query: 42 EKFINEVVIQSQI-----NHINVVKLIGCCLE---------------------------T 69
EK ++++V + ++ H N++ L+G C +
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 70 KYMHDQNK--ELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAK 127
+Y +D N+ E T++ + + + + M YL AS HRD+ + N+L+ + K
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMK 197
Query: 128 VSNFGTSRS-RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GA 174
+++FG +R +D TT ++ P+ DV SFGV++ E+ T G
Sbjct: 198 IADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
Query: 175 KPIRFTTFEEDKNITVAKH---------------AKRCLNPSGKKRPAMKEVASELAGI 218
P EE + H + C + +RP K++ +L I
Sbjct: 258 SPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 93/239 (38%), Gaps = 65/239 (27%)
Query: 42 EKFINEVVIQSQI-----NHINVVKLIGCCLE---------------------------T 69
EK ++++V + ++ H N++ L+G C +
Sbjct: 127 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 186
Query: 70 KYMHDQNK--ELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAK 127
+Y +D N+ E T++ + + + + M YL AS HRD+ + N+L+ + K
Sbjct: 187 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMK 243
Query: 128 VSNFGTSRS-RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GA 174
+++FG +R +D TT ++ P+ DV SFGV++ E+ T G
Sbjct: 244 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 303
Query: 175 KPIRFTTFEEDKNITVAKH---------------AKRCLNPSGKKRPAMKEVASELAGI 218
P EE + H + C + +RP K++ +L I
Sbjct: 304 SPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 61/157 (38%), Gaps = 25/157 (15%)
Query: 42 EKFINEVVIQSQINHINVVKLIGC------------CLETKYMHDQNKELPFTWEMQLRI 89
E NEVVI H NVV++ LE + D E +
Sbjct: 66 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAV 125
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILL---------DDKYCAKVSNFGTSRSRAVD 140
+ +S LH + HRDIKS +ILL D +CA+VS R V
Sbjct: 126 CLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 182
Query: 141 QTH-ITTQVHGTFGYLNPDDVCSFGVVLVELLTGAKP 176
+ + ++ Y D+ S G++++E++ G P
Sbjct: 183 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 31/153 (20%)
Query: 45 INEVVIQSQINHINVVKLIGCCLET------KYMHDQNKELPFTWEMQLRISIEASGTMS 98
IN+++ I + V ++ +ET K H N + + LR +
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR-------GLK 142
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH--ITTQVHGTFGYLN 156
Y+H S + HRD+K +N+LL+ K+ +FG +R D H T+ T Y
Sbjct: 143 YIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 157 PD------------DVCSFGVVLVELLTGAKPI 177
P+ D+ S G +L E+L+ +PI
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 66/165 (40%), Gaps = 36/165 (21%)
Query: 41 VEKFINEVVIQSQINHINVVKLI------------------GCCLETKYMHDQNKELPFT 82
++K EV I +NH N+VKL G + H + KE
Sbjct: 55 LQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEAR 114
Query: 83 WEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAV--- 139
+ + +S + Y H I HRD+K+ N+LLD K+++FG S V
Sbjct: 115 SKFRQIVS-----AVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK 166
Query: 140 ------DQTHITTQVHGTFGYLNPD-DVCSFGVVLVELLTGAKPI 177
+ ++ Y P+ DV S GV+L L++G+ P
Sbjct: 167 LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 211
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 70/173 (40%), Gaps = 36/173 (20%)
Query: 74 DQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGT 133
D+ P L S + + M++L AS HRD+ + N+LL + + AK+ +FG
Sbjct: 148 DKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGL 204
Query: 134 SRSRAVDQTHITT-QVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPI--- 177
+R D +I ++ P+ DV S+G++L E+ + G P
Sbjct: 205 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 264
Query: 178 ----RFTTFEED-----------KNITVAKHAKRCLNPSGKKRPAMKEVASEL 215
+F +D KNI A L P+ RP +++ S L
Sbjct: 265 LVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPT--HRPTFQQICSFL 315
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 53/117 (45%), Gaps = 23/117 (19%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCA--KVSNFGTSRSRAVDQTHITTQVHGTFGY 154
+SY H ++ + HRD+K N LLD K+ +FG S+S + +T GT Y
Sbjct: 127 VSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAY 181
Query: 155 LNPD------------DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLN 199
+ P+ DV S GV L +L GA P F EE KN H R LN
Sbjct: 182 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEPKNFRKTIH--RILN 234
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 61/157 (38%), Gaps = 25/157 (15%)
Query: 42 EKFINEVVIQSQINHINVVKLIGC------------CLETKYMHDQNKELPFTWEMQLRI 89
E NEVVI H NVV++ LE + D E +
Sbjct: 62 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAV 121
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILL---------DDKYCAKVSNFGTSRSRAVD 140
+ +S LH + HRDIKS +ILL D +CA+VS R V
Sbjct: 122 CLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 178
Query: 141 QTH-ITTQVHGTFGYLNPDDVCSFGVVLVELLTGAKP 176
+ + ++ Y D+ S G++++E++ G P
Sbjct: 179 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 66/165 (40%), Gaps = 36/165 (21%)
Query: 41 VEKFINEVVIQSQINHINVVKLI------------------GCCLETKYMHDQNKELPFT 82
++K EV I +NH N+VKL G + H + KE
Sbjct: 58 LQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEAR 117
Query: 83 WEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT 142
+ + +S + Y H I HRD+K+ N+LLD K+++FG S V
Sbjct: 118 SKFRQIVS-----AVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK 169
Query: 143 ---------HITTQVHGTFGYLNPD-DVCSFGVVLVELLTGAKPI 177
+ ++ Y P+ DV S GV+L L++G+ P
Sbjct: 170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 31/153 (20%)
Query: 45 INEVVIQSQINHINVVKLIGCCLET------KYMHDQNKELPFTWEMQLRISIEASGTMS 98
IN+++ I + V ++ +ET K H N + + LR +
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR-------GLK 138
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH--ITTQVHGTFGYLN 156
Y+H S + HRD+K +N+LL+ K+ +FG +R D H T+ T Y
Sbjct: 139 YIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 157 PD------------DVCSFGVVLVELLTGAKPI 177
P+ D+ S G +L E+L+ +PI
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 227
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 58/141 (41%), Gaps = 30/141 (21%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLN 156
+ YLH + HRDIK+ N+LL + K+++FG + Q V GT ++
Sbjct: 132 LDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMA 187
Query: 157 PD-----------DVCSFGVVLVELLTGAKP--------IRFT-------TFEEDKNITV 190
P+ D+ S G+ +EL G P + F T E + + +
Sbjct: 188 PEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPL 247
Query: 191 AKHAKRCLNPSGKKRPAMKEV 211
+ + CLN RP KE+
Sbjct: 248 KEFVEACLNKEPSFRPTAKEL 268
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 31/132 (23%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD--------- 158
+ HRD+K N+ LD K K+ +FG +R D+ + GT Y++P+
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED-FAKEFVGTPYYMSPEQMNRMSYNE 195
Query: 159 --DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAK-----------------RCLN 199
D+ S G +L EL P FT F + + + K R LN
Sbjct: 196 KSDIWSLGCLLYELCALMPP--FTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLN 253
Query: 200 PSGKKRPAMKEV 211
RP+++E+
Sbjct: 254 LKDYHRPSVEEI 265
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 31/153 (20%)
Query: 45 INEVVIQSQINHINVVKLIGCCLET------KYMHDQNKELPFTWEMQLRISIEASGTMS 98
IN+++ I + V ++ +ET K H N + + LR +
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR-------GLK 138
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH--ITTQVHGTFGYLN 156
Y+H S + HRD+K +N+LL+ K+ +FG +R D H T+ T Y
Sbjct: 139 YIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 157 PD------------DVCSFGVVLVELLTGAKPI 177
P+ D+ S G +L E+L+ +PI
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 227
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 62/211 (29%)
Query: 20 FNVNRILGQGGQDIVYKGMAKVE-----------------------KFINEVVIQSQINH 56
F ++LG G VYKG+ E + ++E + + +++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 57 INVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------LRISIEASGTMSYLHL 102
+V +L+G CL T + + +PF + L ++ + M+YL
Sbjct: 77 PHVCRLLGICL-TSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 103 SASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG--------- 153
V HRD+ + N+L+ K+++FG ++ ++ + H G
Sbjct: 136 RRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIKWMAL 188
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKP 176
Y + DV S+GV + EL+T G+KP
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 58/141 (41%), Gaps = 30/141 (21%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLN 156
+ YLH + HRDIK+ N+LL + K+++FG + Q V GT ++
Sbjct: 117 LDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMA 172
Query: 157 PD-----------DVCSFGVVLVELLTGAKP--------IRFT-------TFEEDKNITV 190
P+ D+ S G+ +EL G P + F T E + + +
Sbjct: 173 PEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPL 232
Query: 191 AKHAKRCLNPSGKKRPAMKEV 211
+ + CLN RP KE+
Sbjct: 233 KEFVEACLNKEPSFRPTAKEL 253
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 62/211 (29%)
Query: 20 FNVNRILGQGGQDIVYKGMAKVE-----------------------KFINEVVIQSQINH 56
F ++LG G VYKG+ E + ++E + + +++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 57 INVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------LRISIEASGTMSYLHL 102
+V +L+G CL T + + +PF + L ++ + M+YL
Sbjct: 79 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 103 SASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG--------- 153
V HRD+ + N+L+ K+++FG ++ ++ + H G
Sbjct: 138 RRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIKWMAL 190
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKP 176
Y + DV S+GV + EL+T G+KP
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 72/177 (40%), Gaps = 51/177 (28%)
Query: 44 FINEVVIQSQI-NHINVVKLIGCCLETKYMHDQNKELP-------------FTWEMQLRI 89
F E+ + ++ +H N++ L+G C Y++ + P + I
Sbjct: 69 FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAI 128
Query: 90 SIEASGTMS---YLHLSASVP----------IYHRDIKSTNILLDDKYCAKVSNFGTSRS 136
+ + T+S LH +A V HR++ + NIL+ + Y AK+++FG SR
Sbjct: 129 ANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRG 188
Query: 137 RAVDQTHITTQVHGTFG----------------YLNPDDVCSFGVVLVELLT-GAKP 176
+ V V T G Y DV S+GV+L E+++ G P
Sbjct: 189 QEV-------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 238
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 84/212 (39%), Gaps = 62/212 (29%)
Query: 19 SFNVNRILGQGGQDIVYKGMAKVE-----------------------KFINEVVIQSQIN 55
F ++LG G VYKG+ E + ++E + + ++
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 56 HINVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------LRISIEASGTMSYLH 101
+ +V +L+G CL T + + +PF + L ++ + M+YL
Sbjct: 110 NPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 168
Query: 102 LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG-------- 153
V HRD+ + N+L+ K+++FG ++ ++ + H G
Sbjct: 169 DRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIKWMA 221
Query: 154 --------YLNPDDVCSFGVVLVELLT-GAKP 176
Y + DV S+GV + EL+T G+KP
Sbjct: 222 LESILHRIYTHQSDVWSYGVTVWELMTFGSKP 253
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 66/167 (39%), Gaps = 36/167 (21%)
Query: 39 AKVEKFINEVVIQSQINHINVVKLI------------------GCCLETKYMHDQNKELP 80
+ ++K EV I +NH N+VKL G + H + KE
Sbjct: 55 SSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKE 114
Query: 81 FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVD 140
+ + +S + Y H I HRD+K+ N+LLD K+++FG S
Sbjct: 115 ARAKFRQIVS-----AVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFG 166
Query: 141 QT---------HITTQVHGTFGYLNPD-DVCSFGVVLVELLTGAKPI 177
+ ++ Y P+ DV S GV+L L++G+ P
Sbjct: 167 NKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 15/96 (15%)
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGT 151
E + +LH S + HRDIKS NILL K+++FG +Q+ + V GT
Sbjct: 125 ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GT 180
Query: 152 FGYLNPD-----------DVCSFGVVLVELLTGAKP 176
++ P+ D+ S G++ +E++ G P
Sbjct: 181 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 62/211 (29%)
Query: 20 FNVNRILGQGGQDIVYKGMAKVE-----------------------KFINEVVIQSQINH 56
F ++LG G VYKG+ E + ++E + + +++
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 57 INVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------LRISIEASGTMSYLHL 102
+V +L+G CL T + + +PF + L ++ + M+YL
Sbjct: 84 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 103 SASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG--------- 153
V HRD+ + N+L+ K+++FG ++ ++ + H G
Sbjct: 143 RRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIKWMAL 195
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKP 176
Y + DV S+GV + EL+T G+KP
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 15/96 (15%)
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGT 151
E + +LH S + HR+IKS NILL K+++FG +Q+ +T V GT
Sbjct: 125 ECLQALEFLH---SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GT 180
Query: 152 FGYLNPD-----------DVCSFGVVLVELLTGAKP 176
++ P+ D+ S G++ +E++ G P
Sbjct: 181 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 62/211 (29%)
Query: 20 FNVNRILGQGGQDIVYKGMAKVE-----------------------KFINEVVIQSQINH 56
F ++LG G VYKG+ E + ++E + + +++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 57 INVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------LRISIEASGTMSYLHL 102
+V +L+G CL T + + +PF + L ++ + M+YL
Sbjct: 77 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 103 SASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG--------- 153
V HRD+ + N+L+ K+++FG ++ ++ + H G
Sbjct: 136 RRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIKWMAL 188
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKP 176
Y + DV S+GV + EL+T G+KP
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 62/211 (29%)
Query: 20 FNVNRILGQGGQDIVYKGMAKVE-----------------------KFINEVVIQSQINH 56
F ++LG G VYKG+ E + ++E + + +++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 57 INVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------LRISIEASGTMSYLHL 102
+V +L+G CL T + + +PF + L ++ + M+YL
Sbjct: 80 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 103 SASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG--------- 153
V HRD+ + N+L+ K+++FG ++ ++ + H G
Sbjct: 139 RRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIKWMAL 191
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKP 176
Y + DV S+GV + EL+T G+KP
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 31/153 (20%)
Query: 45 INEVVIQSQINHINVVKLIGCCLET------KYMHDQNKELPFTWEMQLRISIEASGTMS 98
IN+++ I + V ++ +ET K H N + + LR +
Sbjct: 88 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR-------GLK 140
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH--ITTQVHGTFGYLN 156
Y+H S + HRD+K +N+LL+ K+ +FG +R D H T+ T Y
Sbjct: 141 YIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 157 PD------------DVCSFGVVLVELLTGAKPI 177
P+ D+ S G +L E+L+ +PI
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 229
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 91/218 (41%), Gaps = 52/218 (23%)
Query: 7 LFISNELEKATDSFNVNRILGQG-------------GQDIVYKGMAK--------VEKFI 45
+F+ + +D + R+LG+G GQ+ K ++K E +
Sbjct: 21 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 80
Query: 46 NEVVIQSQINHINVVKLIGCCLETKYMHDQNK-----EL--------PFTWEMQLRISIE 92
EV + Q++H N++KL + Y + + EL F+ RI +
Sbjct: 81 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQ 140
Query: 93 ASGTMSYLHLSASVPIYHRDIKSTNILLDDK---YCAKVSNFGTS---------RSRAVD 140
++Y+H + I HRD+K N+LL+ K ++ +FG S + +
Sbjct: 141 VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGT 197
Query: 141 QTHITTQV-HGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+I +V HGT Y DV S GV+L LL+G P
Sbjct: 198 AYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPF 233
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 62/211 (29%)
Query: 20 FNVNRILGQGGQDIVYKGMAKVE-----------------------KFINEVVIQSQINH 56
F ++LG G VYKG+ E + ++E + + +++
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 57 INVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------LRISIEASGTMSYLHL 102
+V +L+G CL T + + +PF + L ++ + M+YL
Sbjct: 84 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 103 SASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG--------- 153
V HRD+ + N+L+ K+++FG ++ ++ + H G
Sbjct: 143 RRLV---HRDLAARNVLVKTPQHVKITDFGRAKLLGAEE----KEYHAEGGKVPIKWMAL 195
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKP 176
Y + DV S+GV + EL+T G+KP
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 62/211 (29%)
Query: 20 FNVNRILGQGGQDIVYKGMAKVE-----------------------KFINEVVIQSQINH 56
F ++LG G VYKG+ E + ++E + + +++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 57 INVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------LRISIEASGTMSYLHL 102
+V +L+G CL T + + +PF + L ++ + M+YL
Sbjct: 77 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 103 SASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG--------- 153
V HRD+ + N+L+ K+++FG ++ ++ + H G
Sbjct: 136 RRLV---HRDLAARNVLVKTPQHVKITDFGRAKLLGAEE----KEYHAEGGKVPIKWMAL 188
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKP 176
Y + DV S+GV + EL+T G+KP
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 62/211 (29%)
Query: 20 FNVNRILGQGGQDIVYKGMAKVE-----------------------KFINEVVIQSQINH 56
F ++LG G VYKG+ E + ++E + + +++
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 57 INVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------LRISIEASGTMSYLHL 102
+V +L+G CL T + + +PF + L ++ + M+YL
Sbjct: 102 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 160
Query: 103 SASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG--------- 153
V HRD+ + N+L+ K+++FG ++ ++ + H G
Sbjct: 161 RRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIKWMAL 213
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKP 176
Y + DV S+GV + EL+T G+KP
Sbjct: 214 ESILHRIYTHQSDVWSYGVTVWELMTFGSKP 244
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 62/211 (29%)
Query: 20 FNVNRILGQGGQDIVYKGMAKVE-----------------------KFINEVVIQSQINH 56
F ++LG G VYKG+ E + ++E + + +++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 57 INVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------LRISIEASGTMSYLHL 102
+V +L+G CL T + + +PF + L ++ + M+YL
Sbjct: 77 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 103 SASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG--------- 153
V HRD+ + N+L+ K+++FG ++ ++ + H G
Sbjct: 136 RRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIKWMAL 188
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKP 176
Y + DV S+GV + EL+T G+KP
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 36/167 (21%)
Query: 39 AKVEKFINEVVIQSQINHINVVKLI------------------GCCLETKYMHDQNKELP 80
+ ++K EV I +NH N+VKL G + H + KE
Sbjct: 55 SSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE 114
Query: 81 FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS---- 136
+ + +S + Y H I HRD+K+ N+LLD K+++FG S
Sbjct: 115 ARAKFRQIVS-----AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG 166
Query: 137 RAVDQ-----THITTQVHGTFGYLNPD-DVCSFGVVLVELLTGAKPI 177
+D+ + ++ Y P+ DV S GV+L L++G+ P
Sbjct: 167 NKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 15/96 (15%)
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGT 151
E + +LH S + HRDIKS NILL K+++FG +Q+ + V GT
Sbjct: 124 ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GT 179
Query: 152 FGYLNPD-----------DVCSFGVVLVELLTGAKP 176
++ P+ D+ S G++ +E++ G P
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 62/211 (29%)
Query: 20 FNVNRILGQGGQDIVYKGMAKVE-----------------------KFINEVVIQSQINH 56
F ++LG G VYKG+ E + ++E + + +++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 57 INVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------LRISIEASGTMSYLHL 102
+V +L+G CL T + + +PF + L ++ + M+YL
Sbjct: 80 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 103 SASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG--------- 153
V HRD+ + N+L+ K+++FG ++ ++ + H G
Sbjct: 139 RRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIKWMAL 191
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKP 176
Y + DV S+GV + EL+T G+KP
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 62/211 (29%)
Query: 20 FNVNRILGQGGQDIVYKGMAKVE-----------------------KFINEVVIQSQINH 56
F ++LG G VYKG+ E + ++E + + +++
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 57 INVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------LRISIEASGTMSYLHL 102
+V +L+G CL T + + +PF + L ++ + M+YL
Sbjct: 87 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 145
Query: 103 SASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG--------- 153
V HRD+ + N+L+ K+++FG ++ ++ + H G
Sbjct: 146 RRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIKWMAL 198
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKP 176
Y + DV S+GV + EL+T G+KP
Sbjct: 199 ESILHRIYTHQSDVWSYGVTVWELMTFGSKP 229
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 40/159 (25%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 53 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 106
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V + T
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 163
Query: 148 VHG--TFGYLNPD------------DVCSFGVVLVELLT 172
H T Y P+ D+ S G + E++T
Sbjct: 164 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 91/239 (38%), Gaps = 65/239 (27%)
Query: 42 EKFINEVVIQSQI-----NHINVVKLIGCC-----------------------------L 67
EK ++++V + ++ H N++ L+G C +
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 68 ETKYMHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAK 127
E Y ++ E T++ + + + + M YL AS HRD+ + N+L+ + K
Sbjct: 141 EXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMK 197
Query: 128 VSNFGTSRS-RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GA 174
+++FG +R +D TT ++ P+ DV SFGV++ E+ T G
Sbjct: 198 IADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
Query: 175 KPIRFTTFEEDKNITVAKH---------------AKRCLNPSGKKRPAMKEVASELAGI 218
P EE + H + C + +RP K++ +L I
Sbjct: 258 SPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 62/211 (29%)
Query: 20 FNVNRILGQGGQDIVYKGMAKVE-----------------------KFINEVVIQSQINH 56
F ++LG G VYKG+ E + ++E + + +++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 57 INVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------LRISIEASGTMSYLHL 102
+V +L+G CL T + + +PF + L ++ + M+YL
Sbjct: 79 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 103 SASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG--------- 153
V HRD+ + N+L+ K+++FG ++ ++ + H G
Sbjct: 138 RRLV---HRDLAARNVLVKTPQHVKITDFGRAKLLGAEE----KEYHAEGGKVPIKWMAL 190
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKP 176
Y + DV S+GV + EL+T G+KP
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 40/170 (23%)
Query: 37 GMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYMHD------------QNKE 78
G E F+ E + ++ H +V+L E +YM +
Sbjct: 53 GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLR 112
Query: 79 LPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
LP +M +I ASG M+Y+ V HRD+++ NIL+ + KV++FG +R
Sbjct: 113 LPQLVDMAAQI---ASG-MAYVERMNYV---HRDLRAANILVGENLVCKVADFGL--ARL 163
Query: 139 VDQTHITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
++ T + F + P+ DV SFG++L EL T +
Sbjct: 164 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 40/159 (25%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 52 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 105
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V + T
Sbjct: 106 LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP---VRTY 162
Query: 148 VHG--TFGYLNPD------------DVCSFGVVLVELLT 172
H T Y P+ D+ S G + E++T
Sbjct: 163 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 62/211 (29%)
Query: 20 FNVNRILGQGGQDIVYKGMAKVE-----------------------KFINEVVIQSQINH 56
F ++LG G VYKG+ E + ++E + + +++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 57 INVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------LRISIEASGTMSYLHL 102
+V +L+G CL T + + +PF + L ++ + M+YL
Sbjct: 80 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 103 SASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG--------- 153
V HRD+ + N+L+ K+++FG ++ ++ + H G
Sbjct: 139 RRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIKWMAL 191
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKP 176
Y + DV S+GV + EL+T G+KP
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 36/168 (21%)
Query: 37 GMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYMHD------------QNKE 78
G E F+ E + ++ H +V+L E +YM +
Sbjct: 53 GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLR 112
Query: 79 LPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFG------ 132
LP +M +I ASG M+Y+ V HRD+++ NIL+ + KV++FG
Sbjct: 113 LPQLVDMAAQI---ASG-MAYVERMNYV---HRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 133 ----TSRSRAVDQTHITTQVHGTFGYLN-PDDVCSFGVVLVELLTGAK 175
T+R A T +G DV SFG++L EL T +
Sbjct: 166 DNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 53/132 (40%), Gaps = 31/132 (23%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD--------- 158
+ HRD+K N+ LD K K+ +FG +R D T GT Y++P+
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-TSFAKAFVGTPYYMSPEQMNRMSYNE 195
Query: 159 --DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAK-----------------RCLN 199
D+ S G +L EL P FT F + + + K R LN
Sbjct: 196 KSDIWSLGCLLYELCALMPP--FTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLN 253
Query: 200 PSGKKRPAMKEV 211
RP+++E+
Sbjct: 254 LKDYHRPSVEEI 265
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 62/211 (29%)
Query: 20 FNVNRILGQGGQDIVYKGMAKVE-----------------------KFINEVVIQSQINH 56
F ++LG G VYKG+ E + ++E + + +++
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 57 INVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------LRISIEASGTMSYLHL 102
+V +L+G CL T + + +PF + L ++ + M+YL
Sbjct: 83 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 141
Query: 103 SASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG--------- 153
V HRD+ + N+L+ K+++FG ++ ++ + H G
Sbjct: 142 RRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIKWMAL 194
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKP 176
Y + DV S+GV + EL+T G+KP
Sbjct: 195 ESILHRIYTHQSDVWSYGVTVWELMTFGSKP 225
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 40/159 (25%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 52 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 105
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V + T
Sbjct: 106 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 162
Query: 148 VHG--TFGYLNPD------------DVCSFGVVLVELLT 172
H T Y P+ D+ S G + E++T
Sbjct: 163 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 40/159 (25%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 51 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 104
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V + T
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP---VRTY 161
Query: 148 VHG--TFGYLNPD------------DVCSFGVVLVELLT 172
H T Y P+ D+ S G + E++T
Sbjct: 162 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 40/159 (25%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 49 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 102
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V + T
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 159
Query: 148 VHG--TFGYLNPD------------DVCSFGVVLVELLT 172
H T Y P+ D+ S G + E++T
Sbjct: 160 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 40/159 (25%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 50 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 103
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V + T
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 160
Query: 148 VHG--TFGYLNPD------------DVCSFGVVLVELLT 172
H T Y P+ D+ S G + E++T
Sbjct: 161 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 40/159 (25%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 50 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 103
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V + T
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 160
Query: 148 VHG--TFGYLNPD------------DVCSFGVVLVELLT 172
H T Y P+ D+ S G + E++T
Sbjct: 161 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTS---------RSRAVDQTHITTQVHGTFGYLNPD 158
+ HRD+K N+LLD AK+++FG S R + +V Y P+
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPE 196
Query: 159 -DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAK-------HAKRCLNPS 201
D+ S GV+L LL G P F++D T+ K + + LNPS
Sbjct: 197 VDIWSSGVILYALLCGTLP-----FDDDHVPTLFKKICDGIFYTPQYLNPS 242
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 40/159 (25%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 51 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 104
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V + T
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 161
Query: 148 VHG--TFGYLNPD------------DVCSFGVVLVELLT 172
H T Y P+ D+ S G + E++T
Sbjct: 162 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 40/159 (25%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 54 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 107
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V + T
Sbjct: 108 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 164
Query: 148 VHG--TFGYLNPD------------DVCSFGVVLVELLT 172
H T Y P+ D+ S G + E++T
Sbjct: 165 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 40/159 (25%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 53 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 106
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V + T
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 163
Query: 148 VHG--TFGYLNPD------------DVCSFGVVLVELLT 172
H T Y P+ D+ S G + E++T
Sbjct: 164 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 40/159 (25%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 52 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 105
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V + T
Sbjct: 106 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 162
Query: 148 VHG--TFGYLNPD------------DVCSFGVVLVELLT 172
H T Y P+ D+ S G + E++T
Sbjct: 163 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 40/159 (25%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 49 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 102
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V + T
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 159
Query: 148 VHG--TFGYLNPD------------DVCSFGVVLVELLT 172
H T Y P+ D+ S G + E++T
Sbjct: 160 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 40/159 (25%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 51 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 104
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V + T
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 161
Query: 148 VHG--TFGYLNPD------------DVCSFGVVLVELLT 172
H T Y P+ D+ S G + E++T
Sbjct: 162 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 15/96 (15%)
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGT 151
E + +LH S + HRDIKS NILL K+++FG +Q+ + V GT
Sbjct: 124 ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GT 179
Query: 152 FGYLNPD-----------DVCSFGVVLVELLTGAKP 176
++ P+ D+ S G++ +E++ G P
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 40/170 (23%)
Query: 37 GMAKVEKFINEVVIQSQINHINVVKLIGCCLET------KYMHD------------QNKE 78
G E F+ E + ++ H +V+L E +YM +
Sbjct: 219 GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLR 278
Query: 79 LPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
LP +M +I ASG M+Y+ V HRD+++ NIL+ + KV++FG +R
Sbjct: 279 LPQLVDMAAQI---ASG-MAYVERMNYV---HRDLRAANILVGENLVCKVADFGL--ARL 329
Query: 139 VDQTHITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
++ T + F + P+ DV SFG++L EL T +
Sbjct: 330 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 62/211 (29%)
Query: 20 FNVNRILGQGGQDIVYKGMAKVE-----------------------KFINEVVIQSQINH 56
F ++LG G VYKG+ E + ++E + + +++
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 57 INVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------LRISIEASGTMSYLHL 102
+V +L+G CL T + + +PF + L ++ + M+YL
Sbjct: 71 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 129
Query: 103 SASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG--------- 153
V HRD+ + N+L+ K+++FG ++ ++ + H G
Sbjct: 130 RRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIKWMAL 182
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKP 176
Y + DV S+GV + EL+T G+KP
Sbjct: 183 ESILHRIYTHQSDVWSYGVTVWELMTFGSKP 213
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 62/211 (29%)
Query: 20 FNVNRILGQGGQDIVYKGMAKVE-----------------------KFINEVVIQSQINH 56
F ++LG G VYKG+ E + ++E + + +++
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 57 INVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------LRISIEASGTMSYLHL 102
+V +L+G CL T + + +PF + L ++ + M+YL
Sbjct: 74 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLED 132
Query: 103 SASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG--------- 153
V HRD+ + N+L+ K+++FG ++ ++ + H G
Sbjct: 133 RRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIKWMAL 185
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKP 176
Y + DV S+GV + EL+T G+KP
Sbjct: 186 ESILHRIYTHQSDVWSYGVTVWELMTFGSKP 216
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 40/159 (25%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 50 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 103
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V + T
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 160
Query: 148 VHG--TFGYLNPD------------DVCSFGVVLVELLT 172
H T Y P+ D+ S G + E++T
Sbjct: 161 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 40/170 (23%)
Query: 37 GMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYMHD------------QNKE 78
G E F+ E + ++ H +V+L E +YM +
Sbjct: 53 GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLR 112
Query: 79 LPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
LP +M +I ASG M+Y+ V HRD+++ NIL+ + KV++FG +R
Sbjct: 113 LPQLVDMAAQI---ASG-MAYVERMNYV---HRDLRAANILVGENLVCKVADFGL--ARL 163
Query: 139 VDQTHITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
++ T + F + P+ DV SFG++L EL T +
Sbjct: 164 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 64/159 (40%), Gaps = 20/159 (12%)
Query: 39 AKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQ----------NKELPFTWEMQLR 88
+ ++K EV I +NH N+VKL K ++ + + W +
Sbjct: 48 SSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKE 107
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT------ 142
+ +S + I HRD+K+ N+LLD K+++FG S
Sbjct: 108 ARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG 167
Query: 143 ---HITTQVHGTFGYLNPD-DVCSFGVVLVELLTGAKPI 177
+ ++ Y P+ DV S GV+L L++G+ P
Sbjct: 168 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 206
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 40/159 (25%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 50 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 103
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V + T
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 160
Query: 148 VHG--TFGYLNPD------------DVCSFGVVLVELLT 172
H T Y P+ D+ S G + E++T
Sbjct: 161 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 17/141 (12%)
Query: 76 NKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR 135
++E FT E E + YLH S + +RDIK N++LD K+++FG +
Sbjct: 102 SRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 158
Query: 136 SRAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEE 184
D + GT YL P+ D GVV+ E++ G P E
Sbjct: 159 EGISDGATMKX-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 217
Query: 185 DKNITVAKHAK--RCLNPSGK 203
+ + + + R L+P K
Sbjct: 218 LFELILMEEIRFPRTLSPEAK 238
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 60/154 (38%), Gaps = 30/154 (19%)
Query: 46 NEVVIQSQINHINVVKLIGCC-----------LETKYMHDQNKELP---FTWEMQLRISI 91
E+ I + H ++VK GCC +E + LP L +
Sbjct: 59 REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQ 118
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHG- 150
+ M+YLH + HR + + N+LLD+ K+ +FG +++ + + G
Sbjct: 119 QICEGMAYLHAQHYI---HRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD 175
Query: 151 --TFGY----------LNPDDVCSFGVVLVELLT 172
F Y DV SFGV L ELLT
Sbjct: 176 SPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 40/159 (25%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNK-ELPFTWEMQ-LRISIEASGTM----- 97
I E+ + ++NH N+VKL+ +H +NK L F + Q L+ ++AS
Sbjct: 50 IREISLLKELNHPNIVKLLDV------IHTENKLYLVFEFLHQDLKDFMDASALTGIPLP 103
Query: 98 ---SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
SYL S + HRD+K N+L++ + K+++FG +R+ V + T
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP---VRTY 160
Query: 148 VHG--TFGYLNPD------------DVCSFGVVLVELLT 172
H T Y P+ D+ S G + E++T
Sbjct: 161 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 60/154 (38%), Gaps = 30/154 (19%)
Query: 46 NEVVIQSQINHINVVKLIGCC-----------LETKYMHDQNKELP---FTWEMQLRISI 91
E+ I + H ++VK GCC +E + LP L +
Sbjct: 60 REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQ 119
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHG- 150
+ M+YLH + HR + + N+LLD+ K+ +FG +++ + + G
Sbjct: 120 QICEGMAYLHAQHYI---HRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD 176
Query: 151 --TFGY----------LNPDDVCSFGVVLVELLT 172
F Y DV SFGV L ELLT
Sbjct: 177 SPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 31/153 (20%)
Query: 45 INEVVIQSQINHINVVKLIGCCLET------KYMHDQNKELPFTWEMQLRISIEASGTMS 98
IN+++ I + V ++ +ET K H N + + LR +
Sbjct: 84 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR-------GLK 136
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH--ITTQVHGTFGYLN 156
Y+H S + HRD+K +N+LL+ K+ +FG +R D H T+ T Y
Sbjct: 137 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 193
Query: 157 PD------------DVCSFGVVLVELLTGAKPI 177
P+ D+ S G +L E+L+ +PI
Sbjct: 194 PEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 225
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 93/239 (38%), Gaps = 65/239 (27%)
Query: 42 EKFINEVVIQSQI-----NHINVVKLIGCCLE---------------------------T 69
EK ++++V + ++ H N++ L+G C +
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 70 KYMHDQNK--ELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAK 127
+Y +D N+ E T++ + + + + M YL AS HRD+ + N+L+ + +
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMR 197
Query: 128 VSNFGTSRS-RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GA 174
+++FG +R +D TT ++ P+ DV SFGV++ E+ T G
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
Query: 175 KPIRFTTFEEDKNITVAKH---------------AKRCLNPSGKKRPAMKEVASELAGI 218
P EE + H + C + +RP K++ +L I
Sbjct: 258 SPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 21/91 (23%)
Query: 105 SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT---HITTQVHGTFGYLNPD--- 158
S+ + HRD+K N+LLD K+++FGT +D+T H T V GT Y++P+
Sbjct: 192 SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMK--MDETGMVHCDTAV-GTPDYISPEVLK 248
Query: 159 ------------DVCSFGVVLVELLTGAKPI 177
D S GV L E+L G P
Sbjct: 249 SQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 31/153 (20%)
Query: 45 INEVVIQSQINHINVVKLIGCCLET------KYMHDQNKELPFTWEMQLRISIEASGTMS 98
IN+++ I + V ++ +ET K H N + + LR +
Sbjct: 84 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR-------GLK 136
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH--ITTQVHGTFGYLN 156
Y+H S + HRD+K +N+LL+ K+ +FG +R D H T+ T Y
Sbjct: 137 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 193
Query: 157 PD------------DVCSFGVVLVELLTGAKPI 177
P+ D+ S G +L E+L+ +PI
Sbjct: 194 PEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 31/153 (20%)
Query: 45 INEVVIQSQINHINVVKLIGCCLET------KYMHDQNKELPFTWEMQLRISIEASGTMS 98
IN+++ I + V ++ +ET K H N + + LR +
Sbjct: 106 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR-------GLK 158
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH--ITTQVHGTFGYLN 156
Y+H S + HRD+K +N+LL+ K+ +FG +R D H T+ T Y
Sbjct: 159 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 215
Query: 157 PD------------DVCSFGVVLVELLTGAKPI 177
P+ D+ S G +L E+L+ +PI
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 247
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 13/82 (15%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD--------- 158
I +RD+K NILLDD ++S+ G + QT I +V GT GY+ P+
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEVVKNERYTF 364
Query: 159 --DVCSFGVVLVELLTGAKPIR 178
D + G +L E++ G P +
Sbjct: 365 SPDWWALGCLLYEMIAGQSPFQ 386
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 92/235 (39%), Gaps = 72/235 (30%)
Query: 5 TKLFISNELEKATDSFNVNRILGQGGQDIVYKGMAK------------------------ 40
+ +F+ +E E + + + R LGQG +VY+G A+
Sbjct: 4 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 41 -VEKFINEVVIQSQINHINVVKLIGCCLETK----------------YMHDQNKEL---- 79
+E F+NE + +VV+L+G + + Y+ E
Sbjct: 64 RIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 80 ---PFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS 136
P T + ++++ E + M+YL+ V HRD+ + N ++ + K+ +FG +R
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTR- 178
Query: 137 RAVDQTHITTQVHGTFG-----YLNPD-----------DVCSFGVVLVELLTGAK 175
D G G ++ P+ D+ SFGVVL E+ + A+
Sbjct: 179 ---DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 31/153 (20%)
Query: 45 INEVVIQSQINHINVVKLIGCCLET------KYMHDQNKELPFTWEMQLRISIEASGTMS 98
IN+++ I + V ++ +ET K H N + + LR +
Sbjct: 88 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR-------GLK 140
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH--ITTQVHGTFGYLN 156
Y+H S + HRD+K +N+LL+ K+ +FG +R D H T+ T Y
Sbjct: 141 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 157 PD------------DVCSFGVVLVELLTGAKPI 177
P+ D+ S G +L E+L+ +PI
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 229
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 44/176 (25%)
Query: 40 KVEKFINEVVIQSQINHINVVKLIGCCLET---------------KY-----------MH 73
++E+F++E +H NV++L+G C+E KY +
Sbjct: 79 EIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLE 138
Query: 74 DQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGT 133
K +P + L+ ++ + M YL ++ HRD+ + N +L D V++FG
Sbjct: 139 TGPKHIPL--QTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGL 193
Query: 134 S------------RSRAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELLT-GAKP 176
S R + I + Y + DV +FGV + E+ T G P
Sbjct: 194 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTP 249
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 31/153 (20%)
Query: 45 INEVVIQSQINHINVVKLIGCCLET------KYMHDQNKELPFTWEMQLRISIEASGTMS 98
IN+++ I + V ++ +ET K H N + + LR +
Sbjct: 88 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR-------GLK 140
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH--ITTQVHGTFGYLN 156
Y+H S + HRD+K +N+LL+ K+ +FG +R D H T+ T Y
Sbjct: 141 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 157 PD------------DVCSFGVVLVELLTGAKPI 177
P+ D+ S G +L E+L+ +PI
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 229
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 92/235 (39%), Gaps = 72/235 (30%)
Query: 5 TKLFISNELEKATDSFNVNRILGQGGQDIVYKGMAK------------------------ 40
+ +F+ +E E + + + R LGQG +VY+G A+
Sbjct: 1 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 60
Query: 41 -VEKFINEVVIQSQINHINVVKLIGCCLETK----------------YMHDQNKEL---- 79
+E F+NE + +VV+L+G + + Y+ E
Sbjct: 61 RIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 119
Query: 80 ---PFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS 136
P T + ++++ E + M+YL+ V HRD+ + N ++ + K+ +FG +R
Sbjct: 120 GRPPPTLQEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTR- 175
Query: 137 RAVDQTHITTQVHGTFG-----YLNPD-----------DVCSFGVVLVELLTGAK 175
D G G ++ P+ D+ SFGVVL E+ + A+
Sbjct: 176 ---DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 227
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 31/153 (20%)
Query: 45 INEVVIQSQINHINVVKLIGCCLET------KYMHDQNKELPFTWEMQLRISIEASGTMS 98
IN+++ I + V ++ +ET K H N + + LR +
Sbjct: 94 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR-------GLK 146
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH--ITTQVHGTFGYLN 156
Y+H S + HRD+K +N+LL+ K+ +FG +R D H T+ T Y
Sbjct: 147 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 203
Query: 157 PD------------DVCSFGVVLVELLTGAKPI 177
P+ D+ S G +L E+L+ +PI
Sbjct: 204 PEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 235
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 31/153 (20%)
Query: 45 INEVVIQSQINHINVVKLIGCCLET------KYMHDQNKELPFTWEMQLRISIEASGTMS 98
IN+++ I + V ++ +ET K H N + + LR +
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR-------GLK 138
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH--ITTQVHGTFGYLN 156
Y+H S + HRD+K +N+LL+ K+ +FG +R D H T+ T Y
Sbjct: 139 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 157 PD------------DVCSFGVVLVELLTGAKPI 177
P+ D+ S G +L E+L+ +PI
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 227
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 31/153 (20%)
Query: 45 INEVVIQSQINHINVVKLIGCCLET------KYMHDQNKELPFTWEMQLRISIEASGTMS 98
IN+++ I + V ++ +ET K H N + + LR +
Sbjct: 91 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR-------GLK 143
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH--ITTQVHGTFGYLN 156
Y+H S + HRD+K +N+LL+ K+ +FG +R D H T+ T Y
Sbjct: 144 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 200
Query: 157 PD------------DVCSFGVVLVELLTGAKPI 177
P+ D+ S G +L E+L+ +PI
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 232
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 31/153 (20%)
Query: 45 INEVVIQSQINHINVVKLIGCCLET------KYMHDQNKELPFTWEMQLRISIEASGTMS 98
IN+++ I + V ++ +ET K H N + + LR +
Sbjct: 92 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR-------GLK 144
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH--ITTQVHGTFGYLN 156
Y+H S + HRD+K +N+LL+ K+ +FG +R D H T+ T Y
Sbjct: 145 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 201
Query: 157 PD------------DVCSFGVVLVELLTGAKPI 177
P+ D+ S G +L E+L+ +PI
Sbjct: 202 PEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 233
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 31/153 (20%)
Query: 45 INEVVIQSQINHINVVKLIGCCLET------KYMHDQNKELPFTWEMQLRISIEASGTMS 98
IN+++ I + V ++ +ET K H N + + LR +
Sbjct: 83 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR-------GLK 135
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH--ITTQVHGTFGYLN 156
Y+H S + HRD+K +N+LL+ K+ +FG +R D H T+ T Y
Sbjct: 136 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 192
Query: 157 PD------------DVCSFGVVLVELLTGAKPI 177
P+ D+ S G +L E+L+ +PI
Sbjct: 193 PEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 224
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 31/153 (20%)
Query: 45 INEVVIQSQINHINVVKLIGCCLET------KYMHDQNKELPFTWEMQLRISIEASGTMS 98
IN+++ I + V ++ +ET K H N + + LR +
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR-------GLK 142
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH--ITTQVHGTFGYLN 156
Y+H S + HRD+K +N+LL+ K+ +FG +R D H T+ T Y
Sbjct: 143 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 157 PD------------DVCSFGVVLVELLTGAKPI 177
P+ D+ S G +L E+L+ +PI
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 31/153 (20%)
Query: 45 INEVVIQSQINHINVVKLIGCCLET------KYMHDQNKELPFTWEMQLRISIEASGTMS 98
IN+++ I + V ++ +ET K H N + + LR +
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR-------GLK 142
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH--ITTQVHGTFGYLN 156
Y+H S + HRD+K +N+LL+ K+ +FG +R D H T+ T Y
Sbjct: 143 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 157 PD------------DVCSFGVVLVELLTGAKPI 177
P+ D+ S G +L E+L+ +PI
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 13/82 (15%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD--------- 158
I +RD+K NILLDD ++S+ G + QT I +V GT GY+ P+
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEVVKNERYTF 364
Query: 159 --DVCSFGVVLVELLTGAKPIR 178
D + G +L E++ G P +
Sbjct: 365 SPDWWALGCLLYEMIAGQSPFQ 386
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 17/141 (12%)
Query: 76 NKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR 135
++E FT E E + YLH S + +RDIK N++LD K+++FG +
Sbjct: 97 SRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
Query: 136 SRAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEE 184
D + GT YL P+ D GVV+ E++ G P E
Sbjct: 154 EGISDGATMKX-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 212
Query: 185 DKNITVAKHAK--RCLNPSGK 203
+ + + + R L+P K
Sbjct: 213 LFELILMEEIRFPRTLSPEAK 233
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 29/143 (20%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLN 156
+ YLH + + HRD+K N+ L+D K+ +FG + D T + GT Y+
Sbjct: 155 VQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIA 210
Query: 157 PDDVC-----------SFGVVLVELLTGAKPIRFTTFEE-----DKN-ITVAKH------ 193
P+ +C S G +L LL G P + +E KN +V +H
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVAS 270
Query: 194 --AKRCLNPSGKKRPAMKEVASE 214
+R L+ RP++ E+ ++
Sbjct: 271 ALIRRMLHADPTLRPSVAELLTD 293
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 66/167 (39%), Gaps = 36/167 (21%)
Query: 39 AKVEKFINEVVIQSQINHINVVKLI------------------GCCLETKYMHDQNKELP 80
+ ++K EV I +NH N+VKL G + H + KE
Sbjct: 55 SSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE 114
Query: 81 FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVD 140
+ + +S + Y H I HRD+K+ N+LLD K+++FG S
Sbjct: 115 ARAKFRQIVS-----AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG 166
Query: 141 QT---------HITTQVHGTFGYLNPD-DVCSFGVVLVELLTGAKPI 177
+ ++ Y P+ DV S GV+L L++G+ P
Sbjct: 167 NKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 31/153 (20%)
Query: 45 INEVVIQSQINHINVVKLIGCCLET------KYMHDQNKELPFTWEMQLRISIEASGTMS 98
IN+++ I + V ++ +ET K H N + + LR +
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR-------GLK 138
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH--ITTQVHGTFGYLN 156
Y+H S + HRD+K +N+LL+ K+ +FG +R D H T+ T Y
Sbjct: 139 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 157 PD------------DVCSFGVVLVELLTGAKPI 177
P+ D+ S G +L E+L+ +PI
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 227
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 80/213 (37%), Gaps = 53/213 (24%)
Query: 18 DSFNVNRILGQGGQDIVYKGMAKVEKFI---------------------NEVVIQSQINH 56
D F + R LG+G VY K FI E+ IQ+ ++H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 57 INVVKL---------IGCCLETKYMHDQNKEL----PFTWEMQLRISIEASGTMSYLHLS 103
N+++L I LE + KEL F + I E + + Y H
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCH-- 140
Query: 104 ASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH-GTFGYLNPD---- 158
+ HRDIK N+LL K K+++FG S V + + GT YL P+
Sbjct: 141 -GKKVIHRDIKPENLLLGLKGELKIADFGWS----VHAPSLRRKTMCGTLDYLPPEMIEG 195
Query: 159 -------DVCSFGVVLVELLTGAKPIRFTTFEE 184
D+ GV+ ELL G P + E
Sbjct: 196 RMHNEKVDLWCIGVLCYELLVGNPPFESASHNE 228
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 66/167 (39%), Gaps = 36/167 (21%)
Query: 39 AKVEKFINEVVIQSQINHINVVKLI------------------GCCLETKYMHDQNKELP 80
+ ++K EV I +NH N+VKL G + H + KE
Sbjct: 55 SSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE 114
Query: 81 FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVD 140
+ + +S + Y H I HRD+K+ N+LLD K+++FG S
Sbjct: 115 ARAKFRQIVS-----AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG 166
Query: 141 QT---------HITTQVHGTFGYLNPD-DVCSFGVVLVELLTGAKPI 177
+ ++ Y P+ DV S GV+L L++G+ P
Sbjct: 167 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 36 KGMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYMHDQN--------KELPF 81
+G + F+ E + Q+ H +V+L + T+YM + + +
Sbjct: 43 QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKL 102
Query: 82 TWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQ 141
T L ++ + + M+++ + HR++++ NIL+ D K+++FG +R ++
Sbjct: 103 TINKLLDMAAQIAEGMAFIEERNYI---HRNLRAANILVSDTLSCKIADFGL--ARLIED 157
Query: 142 THITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
T + F + P+ DV SFG++L E++T +
Sbjct: 158 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 204
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 66/167 (39%), Gaps = 36/167 (21%)
Query: 39 AKVEKFINEVVIQSQINHINVVKLI------------------GCCLETKYMHDQNKELP 80
+ ++K EV I +NH N+VKL G + H + KE
Sbjct: 55 SSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE 114
Query: 81 FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVD 140
+ + +S + Y H I HRD+K+ N+LLD K+++FG S
Sbjct: 115 ARAKFRQIVS-----AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG 166
Query: 141 QT---------HITTQVHGTFGYLNPD-DVCSFGVVLVELLTGAKPI 177
+ ++ Y P+ DV S GV+L L++G+ P
Sbjct: 167 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 62/211 (29%)
Query: 20 FNVNRILGQGGQDIVYKGMAKVE-----------------------KFINEVVIQSQINH 56
F ++LG G VYKG+ E + ++E + + +++
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 57 INVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------LRISIEASGTMSYLHL 102
+V +L+G CL T + + +PF + L ++ + M+YL
Sbjct: 81 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 103 SASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG--------- 153
V HRD+ + N+L+ K+++FG ++ ++ + H G
Sbjct: 140 RRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIKWMAL 192
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKP 176
Y + DV S+GV + EL+T G+KP
Sbjct: 193 ESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 66/167 (39%), Gaps = 36/167 (21%)
Query: 39 AKVEKFINEVVIQSQINHINVVKLI------------------GCCLETKYMHDQNKELP 80
+ ++K EV I +NH N+VKL G + H + KE
Sbjct: 55 SSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE 114
Query: 81 FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVD 140
+ + +S + Y H I HRD+K+ N+LLD K+++FG S
Sbjct: 115 ARAKFRQIVS-----AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG 166
Query: 141 QT---------HITTQVHGTFGYLNPD-DVCSFGVVLVELLTGAKPI 177
+ ++ Y P+ DV S GV+L L++G+ P
Sbjct: 167 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 91/218 (41%), Gaps = 52/218 (23%)
Query: 7 LFISNELEKATDSFNVNRILGQG-------------GQDIVYKGMAK--------VEKFI 45
+F+ + +D + R+LG+G GQ+ K ++K E +
Sbjct: 38 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 97
Query: 46 NEVVIQSQINHINVVKLIGCCLETKYMHDQNK-----EL--------PFTWEMQLRISIE 92
EV + Q++H N++KL + Y + + EL F+ RI +
Sbjct: 98 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQ 157
Query: 93 ASGTMSYLHLSASVPIYHRDIKSTNILLDDK---YCAKVSNFGTS---------RSRAVD 140
++Y+H + I HRD+K N+LL+ K ++ +FG S + +
Sbjct: 158 VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGT 214
Query: 141 QTHITTQV-HGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+I +V HGT Y DV S GV+L LL+G P
Sbjct: 215 AYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPF 250
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 17/141 (12%)
Query: 76 NKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR 135
++E FT E E + YLH S + +RDIK N++LD K+++FG +
Sbjct: 97 SRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
Query: 136 SRAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEE 184
D + GT YL P+ D GVV+ E++ G P E
Sbjct: 154 EGISDGATMKX-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 212
Query: 185 DKNITVAKHAK--RCLNPSGK 203
+ + + + R L+P K
Sbjct: 213 LFELILMEEIRFPRTLSPEAK 233
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 62/211 (29%)
Query: 20 FNVNRILGQGGQDIVYKGMAKVE-----------------------KFINEVVIQSQINH 56
F ++LG G VYKG+ E + ++E + + +++
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 57 INVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------LRISIEASGTMSYLHL 102
+V +L+G CL T + + +PF + L ++ + M+YL
Sbjct: 78 PHVCRLLGICL-TSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 103 SASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG--------- 153
V HRD+ + N+L+ K+++FG ++ ++ + H G
Sbjct: 137 RRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIKWMAL 189
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKP 176
Y + DV S+GV + EL+T G+KP
Sbjct: 190 ESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 31/153 (20%)
Query: 45 INEVVIQSQINHINVVKLIGCCLET------KYMHDQNKELPFTWEMQLRISIEASGTMS 98
IN+++ I + V ++ +ET K H N + + LR +
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILR-------GLK 142
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH--ITTQVHGTFGYLN 156
Y+H S + HRD+K +N+LL+ K+ +FG +R D H T+ T Y
Sbjct: 143 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 157 PD------------DVCSFGVVLVELLTGAKPI 177
P+ D+ S G +L E+L+ +PI
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 58/233 (24%)
Query: 8 FISNELEKATDSFNVNRILGQGGQDIVYK------GMAKVEKFIN--------------E 47
F+ N K +D+++V LG+G +V + G+ K IN E
Sbjct: 19 FMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE 78
Query: 48 VVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEM-------QLRISIEASG----- 95
I ++ H N+V+L E + H +L E+ + +AS
Sbjct: 79 ARICRKLQHPNIVRLHDSIQEESF-HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI 137
Query: 96 --TMSYLHLSASVPIYHRDIKSTNILLDDK---YCAKVSNFGTSRSRAVDQTHITTQVHG 150
+++Y H S I HR++K N+LL K K+++FG + V+ + G
Sbjct: 138 LESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE--VNDSEAWHGFAG 192
Query: 151 TFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAK 192
T GYL+P+ D+ + GV+L LL G P ++ED++ A+
Sbjct: 193 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF----WDEDQHRLYAQ 241
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 91/218 (41%), Gaps = 52/218 (23%)
Query: 7 LFISNELEKATDSFNVNRILGQG-------------GQDIVYKGMAK--------VEKFI 45
+F+ + +D + R+LG+G GQ+ K ++K E +
Sbjct: 39 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 98
Query: 46 NEVVIQSQINHINVVKLIGCCLETKYMHDQNK-----EL--------PFTWEMQLRISIE 92
EV + Q++H N++KL + Y + + EL F+ RI +
Sbjct: 99 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQ 158
Query: 93 ASGTMSYLHLSASVPIYHRDIKSTNILLDDK---YCAKVSNFGTS---------RSRAVD 140
++Y+H + I HRD+K N+LL+ K ++ +FG S + +
Sbjct: 159 VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGT 215
Query: 141 QTHITTQV-HGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+I +V HGT Y DV S GV+L LL+G P
Sbjct: 216 AYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPF 251
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 62/211 (29%)
Query: 20 FNVNRILGQGGQDIVYKGMAKVE-----------------------KFINEVVIQSQINH 56
F ++LG G VYKG+ E + ++E + + +++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 57 INVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------LRISIEASGTMSYLHL 102
+V +L+G CL T + + +PF + L ++ + M+YL
Sbjct: 79 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 103 SASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG--------- 153
V HRD+ + N+L+ K+++FG ++ ++ + H G
Sbjct: 138 RRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIKWMAL 190
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKP 176
Y + DV S+GV + EL+T G+KP
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 36/165 (21%)
Query: 37 GMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYM----------HDQNKELP 80
G VE F+ E + + H +VKL + T++M D+ + P
Sbjct: 50 GSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQP 109
Query: 81 FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVD 140
+ S + + M+++ + HRD+++ NIL+ K+++FG +R ++
Sbjct: 110 LP--KLIDFSAQIAEGMAFIEQRNYI---HRDLRAANILVSASLVCKIADFGL--ARVIE 162
Query: 141 QTHITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLT 172
T + F + P+ DV SFG++L+E++T
Sbjct: 163 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 64/150 (42%), Gaps = 22/150 (14%)
Query: 47 EVVIQSQINHINVVKLIGCCLETK--------YMHDQNKELPFTWEMQLRISIEASGTMS 98
E+V+ +NH N++ L+ K Y+ + + + +Q+ + E +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLL 132
Query: 99 YLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS---------RAVDQTHI 144
Y L S I HRD+K +NI++ K+ +FG +R+ V + +
Sbjct: 133 YQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 145 TTQVHGTFGYLNPDDVCSFGVVLVELLTGA 174
+V GY D+ S GV++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKGG 222
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 62/211 (29%)
Query: 20 FNVNRILGQGGQDIVYKGMAKVE-----------------------KFINEVVIQSQINH 56
F ++LG G VYKG+ E + ++E + + +++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 57 INVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------LRISIEASGTMSYLHL 102
+V +L+G CL T + + +PF + L ++ + M+YL
Sbjct: 79 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 103 SASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG--------- 153
V HRD+ + N+L+ K+++FG ++ ++ + H G
Sbjct: 138 RRLV---HRDLAARNVLVKTPQHVKITDFGRAKLLGAEE----KEYHAEGGKVPIKWMAL 190
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKP 176
Y + DV S+GV + EL+T G+KP
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 62/211 (29%)
Query: 20 FNVNRILGQGGQDIVYKGMAKVE-----------------------KFINEVVIQSQINH 56
F ++LG G VYKG+ E + ++E + + +++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 57 INVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------LRISIEASGTMSYLHL 102
+V +L+G CL T + + +PF + L ++ + M+YL
Sbjct: 79 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 103 SASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG--------- 153
V HRD+ + N+L+ K+++FG ++ ++ + H G
Sbjct: 138 RRLV---HRDLAARNVLVKTPQHVKITDFGRAKLLGAEE----KEYHAEGGKVPIKWMAL 190
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKP 176
Y + DV S+GV + EL+T G+KP
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 62/211 (29%)
Query: 20 FNVNRILGQGGQDIVYKGMAKVE-----------------------KFINEVVIQSQINH 56
F ++LG G VYKG+ E + ++E + + +++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 57 INVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------LRISIEASGTMSYLHL 102
+V +L+G CL T + + +PF + L ++ + M+YL
Sbjct: 80 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 103 SASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG--------- 153
V HRD+ + N+L+ K+++FG ++ ++ + H G
Sbjct: 139 RRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIKWMAL 191
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKP 176
Y + DV S+GV + EL+T G+KP
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 62/211 (29%)
Query: 20 FNVNRILGQGGQDIVYKGMAKVE-----------------------KFINEVVIQSQINH 56
F ++LG G VYKG+ E + ++E + + +++
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 57 INVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------LRISIEASGTMSYLHL 102
+V +L+G CL T + + +PF + L ++ + M+YL
Sbjct: 78 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 103 SASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG--------- 153
V HRD+ + N+L+ K+++FG ++ ++ + H G
Sbjct: 137 RRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIKWMAL 189
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKP 176
Y + DV S+GV + EL+T G+KP
Sbjct: 190 ESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 64/150 (42%), Gaps = 22/150 (14%)
Query: 47 EVVIQSQINHINVVKLIGCCLETK--------YMHDQNKELPFTWEMQLRISIEASGTMS 98
E+V+ +NH N++ L+ K Y+ + + + +Q+ + E +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLL 132
Query: 99 YLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS---------RAVDQTHI 144
Y L S I HRD+K +NI++ K+ +FG +R+ V + +
Sbjct: 133 YQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 145 TTQVHGTFGYLNPDDVCSFGVVLVELLTGA 174
+V GY D+ S GV++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKGG 222
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 62/211 (29%)
Query: 20 FNVNRILGQGGQDIVYKGMAKVE-----------------------KFINEVVIQSQINH 56
F ++LG G VYKG+ E + ++E + + +++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 57 INVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------LRISIEASGTMSYLHL 102
+V +L+G CL T + + +PF + L ++ + M+YL
Sbjct: 77 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 103 SASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG--------- 153
V HRD+ + N+L+ K+++FG ++ ++ + H G
Sbjct: 136 RRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIKWMAL 188
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKP 176
Y + DV S+GV + EL+T G+KP
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 48/204 (23%)
Query: 17 TDSFNVNRILGQGGQDIVY----KGMAK------VEKFINEVVIQSQI------NHINVV 60
+D F V LG+G IVY KG K ++K +++ +++++I +H N++
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNII 111
Query: 61 KL---------IGCCLET---KYMHDQNKELPFTWEMQLRISI-EASGTMSYLHLSASVP 107
KL I LE + D+ E + E ++ + ++YLH +
Sbjct: 112 KLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENG--- 168
Query: 108 IYHRDIKSTNILLDD---KYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD------ 158
I HRD+K N+L K+++FG S+ V+ + V GT GY P+
Sbjct: 169 IVHRDLKPENLLYATPAPDAPLKIADFGL--SKIVEHQVLMKTVCGTPGYCAPEILRGCA 226
Query: 159 -----DVCSFGVVLVELLTGAKPI 177
D+ S G++ LL G +P
Sbjct: 227 YGPEVDMWSVGIITYILLCGFEPF 250
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 17/141 (12%)
Query: 76 NKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR 135
++E FT E E + YLH S + +RDIK N++LD K+++FG +
Sbjct: 97 SRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
Query: 136 SRAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEE 184
D + GT YL P+ D GVV+ E++ G P E
Sbjct: 154 EGISDGATMKX-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 212
Query: 185 DKNITVAKHAK--RCLNPSGK 203
+ + + + R L+P K
Sbjct: 213 LFELILMEEIRFPRTLSPEAK 233
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 52/117 (44%), Gaps = 23/117 (19%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCA--KVSNFGTSRSRAVDQTHITTQVHGTFGY 154
+SY H ++ + HRD+K N LLD K+ FG S+S + +T GT Y
Sbjct: 128 VSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTV--GTPAY 182
Query: 155 LNPD------------DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLN 199
+ P+ DV S GV L +L GA P F EE KN H R LN
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEPKNFRKTIH--RILN 235
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 62/211 (29%)
Query: 20 FNVNRILGQGGQDIVYKGMAKVE-----------------------KFINEVVIQSQINH 56
F ++LG G VYKG+ E + ++E + + +++
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 57 INVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------LRISIEASGTMSYLHL 102
+V +L+G CL T + + +PF + L ++ + M+YL
Sbjct: 81 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 103 SASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFG--------- 153
V HRD+ + N+L+ K+++FG ++ ++ + H G
Sbjct: 140 RRLV---HRDLAARNVLVKTPQHVKITDFGRAKLLGAEE----KEYHAEGGKVPIKWMAL 192
Query: 154 -------YLNPDDVCSFGVVLVELLT-GAKP 176
Y + DV S+GV + EL+T G+KP
Sbjct: 193 ESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 92/235 (39%), Gaps = 72/235 (30%)
Query: 5 TKLFISNELEKATDSFNVNRILGQGGQDIVYKGMAK------------------------ 40
+ +F+ +E E + + + R LGQG +VY+G A+
Sbjct: 4 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 41 -VEKFINEVVIQSQINHINVVKLIGCCLETK----------------YMHDQNKEL---- 79
+E F+NE + +VV+L+G + + Y+ E
Sbjct: 64 RIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 80 ---PFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS 136
P T + ++++ E + M+YL+ V HRD+ + N ++ + K+ +FG +R
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTR- 178
Query: 137 RAVDQTHITTQVHGTFG-----YLNPD-----------DVCSFGVVLVELLTGAK 175
D G G ++ P+ D+ SFGVVL E+ + A+
Sbjct: 179 ---DIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 14/81 (17%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD--------- 158
I HRD+K N+LLDD K+++FG S + D + T G+ Y P+
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLS-NIMTDGNFLKTSC-GSPNYAAPEVINGKLYAG 186
Query: 159 ---DVCSFGVVLVELLTGAKP 176
DV S G+VL +L G P
Sbjct: 187 PEVDVWSCGIVLYVMLVGRLP 207
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 15/99 (15%)
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
S E S ++YLH I +RD+K N+LLD + K++++G + + T+
Sbjct: 127 SAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFC 182
Query: 150 GTFGYLNPD-----------DVCSFGVVLVELLTGAKPI 177
GT Y+ P+ D + GV++ E++ G P
Sbjct: 183 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 29/143 (20%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLN 156
+ YLH + + HRD+K N+ L+D K+ +FG + D + GT Y+
Sbjct: 139 VQYLHNNRVI---HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDLCGTPNYIA 194
Query: 157 PDDVC-----------SFGVVLVELLTGAKPIRFTTFEE-----DKN-ITVAKH------ 193
P+ +C S G +L LL G P + +E KN +V +H
Sbjct: 195 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVAS 254
Query: 194 --AKRCLNPSGKKRPAMKEVASE 214
+R L+ RP++ E+ ++
Sbjct: 255 ALIRRMLHADPTLRPSVAELLTD 277
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 67/179 (37%), Gaps = 44/179 (24%)
Query: 38 MAKVEKFINEVVIQSQINHINVVKLIGCC-------LETKYMH--DQNKEL--------- 79
+A + F E + + + H ++VK G C + +YM D NK L
Sbjct: 58 LAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMI 117
Query: 80 -----------PFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKV 128
L I+ + + M YL AS HRD+ + N L+ K+
Sbjct: 118 LVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKI 174
Query: 129 SNFGTSRS-RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLTGAK 175
+FG SR + D + ++ P+ DV SFGV+L E+ T K
Sbjct: 175 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGK 233
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + KV++FG ++ R +T ++ +
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-RVKGRTWXLCGTPEYLAPE 209
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 42/160 (26%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWE---MQLRISIEASGTM---- 97
I E+ + ++NH N+VKL+ +H +NK L +E L+ ++AS
Sbjct: 53 IREISLLKELNHPNIVKLLDV------IHTENK-LYLVFEHVDQDLKKFMDASALTGIPL 105
Query: 98 ----SYLH-------LSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITT 146
SYL S + HRD+K N+L++ + K+++FG +R+ V + T
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRT 162
Query: 147 QVHG--TFGYLNPD------------DVCSFGVVLVELLT 172
H T Y P+ D+ S G + E++T
Sbjct: 163 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 91/218 (41%), Gaps = 52/218 (23%)
Query: 7 LFISNELEKATDSFNVNRILGQG-------------GQDIVYKGMAK--------VEKFI 45
+F+ + +D + R+LG+G GQ+ K ++K E +
Sbjct: 15 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 74
Query: 46 NEVVIQSQINHINVVKLIGCCLETKYMHDQNK-----EL--------PFTWEMQLRISIE 92
EV + Q++H N++KL + Y + + EL F+ RI +
Sbjct: 75 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQ 134
Query: 93 ASGTMSYLHLSASVPIYHRDIKSTNILLDDK---YCAKVSNFGTS---------RSRAVD 140
++Y+H + I HRD+K N+LL+ K ++ +FG S + +
Sbjct: 135 VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGT 191
Query: 141 QTHITTQV-HGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+I +V HGT Y DV S GV+L LL+G P
Sbjct: 192 AYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPF 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R A + T ++ T+ +
Sbjct: 145 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIM 201
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 254
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 255 KKISSESA 262
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH--ITTQVHGTFGY 154
+ Y+H S + HRD+K +N+LL+ K+ +FG +R D H T+ T Y
Sbjct: 157 LKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 213
Query: 155 LNPD------------DVCSFGVVLVELLTGAKPI 177
P+ D+ S G +L E+L+ +PI
Sbjct: 214 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 247
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 75/191 (39%), Gaps = 53/191 (27%)
Query: 44 FINEVVIQSQINHINVVKLIGCC-------LETKYMH--DQNKEL--------------- 79
F E + ++ ++ N+VKL+G C L +YM D N+ L
Sbjct: 97 FQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSD 156
Query: 80 -------------PFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCA 126
P + QL I+ + + M+YL V HRD+ + N L+ +
Sbjct: 157 LSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFV---HRDLATRNCLVGENMVV 213
Query: 127 KVSNFGTSR------------SRAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELLT-G 173
K+++FG SR + A+ + + Y DV ++GVVL E+ + G
Sbjct: 214 KIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYG 273
Query: 174 AKPIRFTTFEE 184
+P EE
Sbjct: 274 LQPYYGMAHEE 284
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 31/153 (20%)
Query: 45 INEVVIQSQINHINVVKLIGCCLET------KYMHDQNKELPFTWEMQLRISIEASGTMS 98
IN+++ I + V ++ +ET K H N + + LR +
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR-------GLK 142
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH-------ITTQVH-- 149
Y+H S + HRD+K +N+LL+ K+ +FG +R D H + T+ +
Sbjct: 143 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRA 199
Query: 150 -----GTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ GY D+ S G +L E+L+ +PI
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R A + T ++ T+ +
Sbjct: 145 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIM 201
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 254
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 255 KKISSESA 262
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R A + T ++ T+ +
Sbjct: 145 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIM 201
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 254
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 255 KKISSESA 262
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + KV++FG ++ R +T ++ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-RVKGRTWXLCGTPEYLAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 31/153 (20%)
Query: 45 INEVVIQSQINHINVVKLIGCCLET------KYMHDQNKELPFTWEMQLRISIEASGTMS 98
IN+++ I + V ++ +ET K H N + + LR +
Sbjct: 91 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR-------GLK 143
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH-------ITTQVH-- 149
Y+H S + HRD+K +N+LL+ K+ +FG +R D H + T+ +
Sbjct: 144 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRA 200
Query: 150 -----GTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ GY D+ S G +L E+L+ +PI
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 232
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 36/165 (21%)
Query: 37 GMAKVEKFINEVVIQSQINHINVVKLIGCCLE------TKYM----------HDQNKELP 80
G VE F+ E + + H +VKL + T++M D+ + P
Sbjct: 223 GSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQP 282
Query: 81 FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVD 140
+ S + + M+++ + HRD+++ NIL+ K+++FG +R ++
Sbjct: 283 LP--KLIDFSAQIAEGMAFIEQRNYI---HRDLRAANILVSASLVCKIADFGL--ARVIE 335
Query: 141 QTHITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLT 172
T + F + P+ DV SFG++L+E++T
Sbjct: 336 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 15/99 (15%)
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
S E S ++YLH I +RD+K N+LLD + K++++G + + T+
Sbjct: 116 SAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFC 171
Query: 150 GTFGYLNPD-----------DVCSFGVVLVELLTGAKPI 177
GT Y+ P+ D + GV++ E++ G P
Sbjct: 172 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + KV++FG ++ R +T ++ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-RVKGRTWXLCGTPEYLAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 92/235 (39%), Gaps = 72/235 (30%)
Query: 5 TKLFISNELEKATDSFNVNRILGQGGQDIVYKGMAK------------------------ 40
+ +F+ +E E + + + R LGQG +VY+G A+
Sbjct: 4 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 41 -VEKFINEVVIQSQINHINVVKLIGCCLETK----------------YMHDQNKEL---- 79
+E F+NE + +VV+L+G + + Y+ E
Sbjct: 64 RIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 80 ---PFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS 136
P T + ++++ E + M+YL+ V HRD+ + N ++ + K+ +FG +R
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTR- 178
Query: 137 RAVDQTHITTQVHGTFG-----YLNPD-----------DVCSFGVVLVELLTGAK 175
D G G ++ P+ D+ SFGVVL E+ + A+
Sbjct: 179 ---DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 15/99 (15%)
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
S E S ++YLH I +RD+K N+LLD + K++++G + + T+
Sbjct: 112 SAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFC 167
Query: 150 GTFGYLNPD-----------DVCSFGVVLVELLTGAKPI 177
GT Y+ P+ D + GV++ E++ G P
Sbjct: 168 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + KV++FG ++ R +T ++ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-RVKGRTWXLCGTPEYLAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 15/99 (15%)
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
S E S ++YLH I +RD+K N+LLD + K++++G + + T+
Sbjct: 159 SAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSTFC 214
Query: 150 GTFGYLNPD-----------DVCSFGVVLVELLTGAKPI 177
GT Y+ P+ D + GV++ E++ G P
Sbjct: 215 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 29/143 (20%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLN 156
+ YLH + + HRD+K N+ L+D K+ +FG + D + GT Y+
Sbjct: 155 VQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDLCGTPNYIA 210
Query: 157 PDDVC-----------SFGVVLVELLTGAKPIRFTTFEE-----DKN-ITVAKH------ 193
P+ +C S G +L LL G P + +E KN +V +H
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVAS 270
Query: 194 --AKRCLNPSGKKRPAMKEVASE 214
+R L+ RP++ E+ ++
Sbjct: 271 ALIRRMLHADPTLRPSVAELLTD 293
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 65/168 (38%), Gaps = 46/168 (27%)
Query: 41 VEKFINEVVIQSQINHINVVKLIGCCLET------------------KYMHDQNKELP-- 80
+ F E+ I + H N+VK G C +Y+ + +
Sbjct: 58 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHI 117
Query: 81 --FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
+ Q+ +E GT Y+H RD+ + NIL++++ K+ +FG ++
Sbjct: 118 KLLQYTSQICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLP 168
Query: 139 VDQTHITTQVHG---TFGYLNPD-----------DVCSFGVVLVELLT 172
D+ + G F Y P+ DV SFGVVL EL T
Sbjct: 169 QDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 46/168 (27%)
Query: 41 VEKFINEVVIQSQINHINVVKLIGCCLET------------------KYMHDQNKELP-- 80
+ F E+ I + H N+VK G C Y+ + +
Sbjct: 55 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 114
Query: 81 --FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
+ Q+ +E GT Y+H RD+ + NIL++++ K+ +FG ++
Sbjct: 115 KLLQYTSQICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLP 165
Query: 139 VDQTHITTQVHG---TFGYLNPD-----------DVCSFGVVLVELLT 172
D+ + G F Y P+ DV SFGVVL EL T
Sbjct: 166 QDKEFFKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 45/158 (28%)
Query: 110 HRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHG---TFGYL----------N 156
HRD+ + NIL++ + K+++FG ++ +D+ + + G F Y
Sbjct: 150 HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSR 209
Query: 157 PDDVCSFGVVLVELLT--------GAKPIRFTTFEEDK---------------------- 186
DV SFGVVL EL T A+ +R E D
Sbjct: 210 QSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPAC 269
Query: 187 NITVAKHAKRCLNPSGKKRPAMKEVASELAGIKAWNGA 224
V + K C PS + RP+ + +L + W+G+
Sbjct: 270 PAEVHELMKLCWAPSPQDRPSFSALGPQLDML--WSGS 305
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 45/158 (28%)
Query: 110 HRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHG---TFGYL----------N 156
HRD+ + NIL++ + K+++FG ++ +D+ + + G F Y
Sbjct: 138 HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSR 197
Query: 157 PDDVCSFGVVLVELLT--------GAKPIRFTTFEEDK---------------------- 186
DV SFGVVL EL T A+ +R E D
Sbjct: 198 QSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPPAC 257
Query: 187 NITVAKHAKRCLNPSGKKRPAMKEVASELAGIKAWNGA 224
V + K C PS + RP+ + +L + W+G+
Sbjct: 258 PAEVHELMKLCWAPSPQDRPSFSALGPQLDML--WSGS 293
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 44 FINEVVIQSQINHINVVKLIGCCLE-------TKYMHD-------QNKELPFTWEMQLRI 89
F++E I Q +H NV+ L G + T++M + + + FT + +
Sbjct: 55 FLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGM 114
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH--ITTQ 147
+ M YL A + HR + + NIL++ KVS+FG SR D + T+
Sbjct: 115 LRGIAAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA 171
Query: 148 VHGTF-------------GYLNPDDVCSFGVVLVELLT-GAKP 176
+ G + + DV S+G+V+ E+++ G +P
Sbjct: 172 LGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 10/80 (12%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTS---------RSRAVDQTHITTQVHGTFGYLNPD 158
+ HRD+K N+LLD AK+++FG S R+ + +V Y P+
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPE 191
Query: 159 -DVCSFGVVLVELLTGAKPI 177
D+ S GV+L LL G P
Sbjct: 192 VDIWSCGVILYALLCGTLPF 211
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 53/125 (42%), Gaps = 16/125 (12%)
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGT 151
E + YLH +V +RD+K N++LD K+++FG + D + T GT
Sbjct: 259 EIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGT 315
Query: 152 FGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAK--RCL 198
YL P+ D GVV+ E++ G P E+ + + + + R L
Sbjct: 316 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTL 375
Query: 199 NPSGK 203
P K
Sbjct: 376 GPEAK 380
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 29/143 (20%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLN 156
+ YLH + + HRD+K N+ L+D K+ +FG + D + GT Y+
Sbjct: 155 VQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKXLCGTPNYIA 210
Query: 157 PDDVC-----------SFGVVLVELLTGAKPIRFTTFEE-----DKN-ITVAKH------ 193
P+ +C S G +L LL G P + +E KN +V +H
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVAS 270
Query: 194 --AKRCLNPSGKKRPAMKEVASE 214
+R L+ RP++ E+ ++
Sbjct: 271 ALIRRMLHADPTLRPSVAELLTD 293
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 23/152 (15%)
Query: 45 INEVVIQSQINHINVVKLIGC-------CLETKYMHDQNKELPFTWEMQLRISIEASGTM 97
I E+ I ++ H N+VKL L +++ K+L E L S +
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL 107
Query: 98 SYLHLSASVP---IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGY 154
L+ A + HRD+K N+L++ + K+++FG +R+ + T +V T Y
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEV-VTLWY 166
Query: 155 LNPD------------DVCSFGVVLVELLTGA 174
PD D+ S G + E++ GA
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGA 198
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 68/171 (39%), Gaps = 40/171 (23%)
Query: 39 AKVEKFINEVVIQSQINHINVVKLIGCCLETK-----------------------YMHDQ 75
+ +E+F+ E + +H +V KL+G L ++ + +
Sbjct: 67 SDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASR 126
Query: 76 NKELPFTWEMQ--LRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGT 133
E PF +Q +R ++ + M YL +S HRD+ + N +L + V++FG
Sbjct: 127 IGENPFNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGL 183
Query: 134 SR------------SRAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELLT 172
SR + + + + Y DV +FGV + E++T
Sbjct: 184 SRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 53/125 (42%), Gaps = 16/125 (12%)
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGT 151
E + YLH +V +RD+K N++LD K+++FG + D + T GT
Sbjct: 256 EIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGT 312
Query: 152 FGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAK--RCL 198
YL P+ D GVV+ E++ G P E+ + + + + R L
Sbjct: 313 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTL 372
Query: 199 NPSGK 203
P K
Sbjct: 373 GPEAK 377
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 45/158 (28%)
Query: 110 HRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHG---TFGYL----------N 156
HRD+ + NIL++ + K+++FG ++ +D+ + + G F Y
Sbjct: 137 HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSR 196
Query: 157 PDDVCSFGVVLVELLT--------GAKPIRFTTFEEDK---------------------- 186
DV SFGVVL EL T A+ +R E D
Sbjct: 197 QSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSRLLELLEEGQRLPAPPAC 256
Query: 187 NITVAKHAKRCLNPSGKKRPAMKEVASELAGIKAWNGA 224
V + K C PS + RP+ + +L + W+G+
Sbjct: 257 PAEVHELMKLCWAPSPQDRPSFSALGPQLDML--WSGS 292
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 92/235 (39%), Gaps = 72/235 (30%)
Query: 5 TKLFISNELEKATDSFNVNRILGQGGQDIVYKGMAK------------------------ 40
+ +++ +E E + + + R LGQG +VY+G A+
Sbjct: 4 SSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 41 -VEKFINEVVIQSQINHINVVKLIGCCLETK----------------YMHDQNKEL---- 79
+E F+NE + +VV+L+G + + Y+ E
Sbjct: 64 RIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 80 ---PFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS 136
P T + ++++ E + M+YL+ V HRD+ + N ++ + K+ +FG +R
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTR- 178
Query: 137 RAVDQTHITTQVHGTFG-----YLNPD-----------DVCSFGVVLVELLTGAK 175
D G G ++ P+ D+ SFGVVL E+ + A+
Sbjct: 179 ---DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 51/117 (43%), Gaps = 23/117 (19%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCA--KVSNFGTSRSRAVDQTHITTQVHGTFGY 154
+SY H ++ + HRD+K N LLD K+ FG S+S + T GT Y
Sbjct: 128 VSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTV--GTPAY 182
Query: 155 LNPD------------DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLN 199
+ P+ DV S GV L +L GA P F EE KN H R LN
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEPKNFRKTIH--RILN 235
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 17/108 (15%)
Query: 110 HRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD----------- 158
HRDIK N+LLD ++++FG+ D T ++ GT Y++P+
Sbjct: 198 HRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGK 257
Query: 159 -----DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPS 201
D S GV + E+L G P + E + H +R PS
Sbjct: 258 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYG-KIMNHEERFQFPS 304
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 17/108 (15%)
Query: 110 HRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD----------- 158
HRDIK N+LLD ++++FG+ D T ++ GT Y++P+
Sbjct: 214 HRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGK 273
Query: 159 -----DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPS 201
D S GV + E+L G P + E + H +R PS
Sbjct: 274 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYG-KIMNHEERFQFPS 320
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 39/166 (23%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------L 87
++ ++E + + +++ +V +L+G CL T + + +PF + L
Sbjct: 69 KEILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL 127
Query: 88 RISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
++ + M+YL V HRD+ + N+L+ K+++FG ++ ++ +
Sbjct: 128 NWCVQIAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KE 180
Query: 148 VHGTFG----------------YLNPDDVCSFGVVLVELLT-GAKP 176
H G Y + DV S+GV + EL+T G+KP
Sbjct: 181 YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+++D + KV++FG ++ R +T ++ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAK-RVKGRTWXLCGTPEYLAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 21/105 (20%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCA--KVSNFGTSRSRAVDQTHITTQVHGTFGY 154
+SY H S+ I HRD+K N LLD K+ +FG S+S + +T GT Y
Sbjct: 129 VSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAY 183
Query: 155 LNPD------------DVCSFGVVLVELLTGAKPIRFTTFEEDKN 187
+ P+ DV S GV L +L GA P F EE ++
Sbjct: 184 IAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYP--FEDPEEPRD 226
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 16/96 (16%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD--------- 158
I HRD+K NILLD+ +++F + + +T ITT GT Y+ P+
Sbjct: 136 IIHRDMKPDNILLDEHGHVHITDFNIA-AMLPRETQITTMA-GTKPYMAPEMFSSRKGAG 193
Query: 159 -----DVCSFGVVLVELLTGAKPIRFTTFEEDKNIT 189
D S GV ELL G +P + K I
Sbjct: 194 YSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV 229
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 46/168 (27%)
Query: 41 VEKFINEVVIQSQINHINVVKLIGCCLET------------------KYMHDQNKELP-- 80
+ F E+ I + H N+VK G C Y+ + +
Sbjct: 62 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 121
Query: 81 --FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
+ Q+ +E GT Y+H RD+ + NIL++++ K+ +FG ++
Sbjct: 122 KLLQYTSQICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLP 172
Query: 139 VDQTHITTQVHG---TFGYLNPD-----------DVCSFGVVLVELLT 172
D+ + G F Y P+ DV SFGVVL EL T
Sbjct: 173 QDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 46/168 (27%)
Query: 41 VEKFINEVVIQSQINHINVVKLIGCCLET------------------KYMHDQNKELP-- 80
+ F E+ I + H N+VK G C Y+ + +
Sbjct: 61 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 120
Query: 81 --FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
+ Q+ +E GT Y+H RD+ + NIL++++ K+ +FG ++
Sbjct: 121 KLLQYTSQICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLP 171
Query: 139 VDQTHITTQVHG---TFGYLNPD-----------DVCSFGVVLVELLT 172
D+ + G F Y P+ DV SFGVVL EL T
Sbjct: 172 QDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 32/178 (17%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMH-----------DQNKELPFTWEMQL--RISI 91
+ E+ + Q+ H N+V L+ C + K + D + P + Q+ +
Sbjct: 72 MREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLF 131
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA----VDQTHITTQ 147
+ + + H S I HRDIK NIL+ K+ +FG +R+ A V + T+
Sbjct: 132 QIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATR 188
Query: 148 VH-------GTFGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCL 198
+ G Y DV + G ++ E+ G +P+ F D +I H CL
Sbjct: 189 WYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG-EPL----FPGDSDIDQLYHIMMCL 241
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 46/168 (27%)
Query: 41 VEKFINEVVIQSQINHINVVKLIGCCLET------------------KYMHDQNKELP-- 80
+ F E+ I + H N+VK G C Y+ + +
Sbjct: 60 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 119
Query: 81 --FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
+ Q+ +E GT Y+H RD+ + NIL++++ K+ +FG ++
Sbjct: 120 KLLQYTSQICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLP 170
Query: 139 VDQTHITTQVHG---TFGYLNPD-----------DVCSFGVVLVELLT 172
D+ + G F Y P+ DV SFGVVL EL T
Sbjct: 171 QDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 39/166 (23%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------L 87
++ ++E + + +++ +V +L+G CL T + + +PF + L
Sbjct: 62 KEILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL 120
Query: 88 RISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
++ + M+YL V HRD+ + N+L+ K+++FG ++ ++ +
Sbjct: 121 NWCVQIAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KE 173
Query: 148 VHGTFG----------------YLNPDDVCSFGVVLVELLT-GAKP 176
H G Y + DV S+GV + EL+T G+KP
Sbjct: 174 YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 46/168 (27%)
Query: 41 VEKFINEVVIQSQINHINVVKLIGCCLET------------------KYMHDQNKELP-- 80
+ F E+ I + H N+VK G C Y+ + +
Sbjct: 86 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 145
Query: 81 --FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
+ Q+ +E GT Y+H RD+ + NIL++++ K+ +FG ++
Sbjct: 146 KLLQYTSQICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLP 196
Query: 139 VDQTHITTQVHG---TFGYLNPD-----------DVCSFGVVLVELLT 172
D+ + G F Y P+ DV SFGVVL EL T
Sbjct: 197 QDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 10/80 (12%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTS---------RSRAVDQTHITTQVHGTFGYLNPD 158
+ HRD+K N+LLD AK+++FG S R + +V Y P+
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPE 191
Query: 159 -DVCSFGVVLVELLTGAKPI 177
D+ S GV+L LL G P
Sbjct: 192 VDIWSCGVILYALLCGTLPF 211
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+++D + KV++FG ++ R +T ++ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-RVKGRTWXLCGTPEYLAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 46/168 (27%)
Query: 41 VEKFINEVVIQSQINHINVVKLIGCCLET------------------KYMHDQNKELP-- 80
+ F E+ I + H N+VK G C Y+ + +
Sbjct: 59 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 118
Query: 81 --FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
+ Q+ +E GT Y+H RD+ + NIL++++ K+ +FG ++
Sbjct: 119 KLLQYTSQICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLP 169
Query: 139 VDQTHITTQVHG---TFGYLNPD-----------DVCSFGVVLVELLT 172
D+ + G F Y P+ DV SFGVVL EL T
Sbjct: 170 QDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+++D + KV++FG ++ R +T ++ +
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-RVKGRTWXLCGTPEYLAPE 209
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+++D + KV++FG ++ R +T ++ +
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-RVKGRTWXLCGTPEYLAPE 209
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+++D + KV++FG ++ R +T ++ +
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-RVKGRTWXLCGTPEYLAPE 209
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 46/168 (27%)
Query: 41 VEKFINEVVIQSQINHINVVKLIGCCLET------------------KYMHDQNKELP-- 80
+ F E+ I + H N+VK G C Y+ + +
Sbjct: 53 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 112
Query: 81 --FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
+ Q+ +E GT Y+H RD+ + NIL++++ K+ +FG ++
Sbjct: 113 KLLQYTSQICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLP 163
Query: 139 VDQTHITTQVHG---TFGYLNPD-----------DVCSFGVVLVELLT 172
D+ + G F Y P+ DV SFGVVL EL T
Sbjct: 164 QDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+++D + KV++FG ++ R +T ++ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-RVKGRTWXLCGTPEYLAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 46/168 (27%)
Query: 41 VEKFINEVVIQSQINHINVVKLIGCCLET------------------KYMHDQNKELP-- 80
+ F E+ I + H N+VK G C Y+ + +
Sbjct: 58 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 117
Query: 81 --FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
+ Q+ +E GT Y+H RD+ + NIL++++ K+ +FG ++
Sbjct: 118 KLLQYTSQICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLP 168
Query: 139 VDQTHITTQVHG---TFGYLNPD-----------DVCSFGVVLVELLT 172
D+ + G F Y P+ DV SFGVVL EL T
Sbjct: 169 QDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 46/168 (27%)
Query: 41 VEKFINEVVIQSQINHINVVKLIGCCLET------------------KYMHDQNKELP-- 80
+ F E+ I + H N+VK G C Y+ + +
Sbjct: 55 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 114
Query: 81 --FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
+ Q+ +E GT Y+H RD+ + NIL++++ K+ +FG ++
Sbjct: 115 KLLQYTSQICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLP 165
Query: 139 VDQTHITTQVHG---TFGYLNPD-----------DVCSFGVVLVELLT 172
D+ + G F Y P+ DV SFGVVL EL T
Sbjct: 166 QDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 66/170 (38%), Gaps = 50/170 (29%)
Query: 41 VEKFINEVVIQSQINHINVVKLIGCCLET------------------KYMH------DQN 76
+ F E+ I + H N+VK G C Y+ D
Sbjct: 58 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHI 117
Query: 77 KELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS 136
K L +T Q+ +E GT Y+H RD+ + NIL++++ K+ +FG ++
Sbjct: 118 KLLQYT--SQICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKV 166
Query: 137 RAVDQTHITTQVHG---TFGYLNPD-----------DVCSFGVVLVELLT 172
D+ + G F Y P+ DV SFGVVL EL T
Sbjct: 167 LPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 46/168 (27%)
Query: 41 VEKFINEVVIQSQINHINVVKLIGCCLET------------------KYMHDQNKELP-- 80
+ F E+ I + H N+VK G C Y+ + +
Sbjct: 55 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 114
Query: 81 --FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
+ Q+ +E GT Y+H RD+ + NIL++++ K+ +FG ++
Sbjct: 115 KLLQYTSQICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLP 165
Query: 139 VDQTHITTQVHG---TFGYLNPD-----------DVCSFGVVLVELLT 172
D+ + G F Y P+ DV SFGVVL EL T
Sbjct: 166 QDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 79/220 (35%), Gaps = 68/220 (30%)
Query: 19 SFNVNRILGQGGQDIVYKGMAKV-------------------EKFINEVVIQSQINHINV 59
F + LG+GG +V++ KV EK + EV +++ H +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 60 VKLIGCCLE---TKYMHDQNKELPFTWEMQL------------RISIEASGTMSYLHLSA 104
V+ LE T+ + + ++ +MQL R +IE LH+
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFL 125
Query: 105 SVP----------IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITT-------- 146
+ + HRD+K +NI KV +FG + D+ T
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 147 ---------------QVHGTFGYLNPDDVCSFGVVLVELL 171
Q+HG Y + D+ S G++L ELL
Sbjct: 186 RHTGQVGTKLYMSPEQIHGN-SYSHKVDIFSLGLILFELL 224
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 46/168 (27%)
Query: 41 VEKFINEVVIQSQINHINVVKLIGCCLET------------------KYMHDQNKELP-- 80
+ F E+ I + H N+VK G C Y+ + +
Sbjct: 54 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 113
Query: 81 --FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
+ Q+ +E GT Y+H RD+ + NIL++++ K+ +FG ++
Sbjct: 114 KLLQYTSQICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLP 164
Query: 139 VDQTHITTQVHG---TFGYLNPD-----------DVCSFGVVLVELLT 172
D+ + G F Y P+ DV SFGVVL EL T
Sbjct: 165 QDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D++ +V++FG ++ R +T ++ +
Sbjct: 140 TFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 195
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 196 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+++D + KV++FG ++ R +T ++ +
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-RVKGRTWXLCGTPEYLAPE 209
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 71/168 (42%), Gaps = 35/168 (20%)
Query: 37 GMAKVEKFINEVVIQSQINHINVVKLIGCC-------LETKYMHDQNKELPFTWEMQ--- 86
G V+ F+ E + + H +V+L + T+YM + L F +
Sbjct: 48 GTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMA-KGSLLDFLKSDEGGK 106
Query: 87 ------LRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVD 140
+ S + + M+Y+ + HRD+++ N+L+ + K+++FG +R ++
Sbjct: 107 VLLPKLIDFSAQIAEGMAYIERKNYI---HRDLRAANVLVSESLMCKIADFGL--ARVIE 161
Query: 141 QTHITTQVHGTF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
T + F + P+ DV SFG++L E++T K
Sbjct: 162 DNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGK 209
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 46/168 (27%)
Query: 41 VEKFINEVVIQSQINHINVVKLIGCCLET------------------KYMHDQNKELP-- 80
+ F E+ I + H N+VK G C Y+ + +
Sbjct: 73 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 132
Query: 81 --FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
+ Q+ +E GT Y+H RD+ + NIL++++ K+ +FG ++
Sbjct: 133 KLLQYTSQICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLP 183
Query: 139 VDQTHITTQVHG---TFGYLNPD-----------DVCSFGVVLVELLT 172
D+ + G F Y P+ DV SFGVVL EL T
Sbjct: 184 QDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 18/93 (19%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYL 155
T YLH S+ + +RD+K N+L+D + +V++FG ++ R + T + GT YL
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGR---TWXLXGTPEYL 205
Query: 156 NPD-----------DVCSFGVVLVELLTGAKPI 177
P+ D + GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 69/163 (42%), Gaps = 33/163 (20%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEMQLRI-------SIEAS 94
E+ NE+ + ++H N++KL + KY + E E+ +I +A+
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFY-LVTEFYEGGELFEQIINRHKFDECDAA 149
Query: 95 GTMS-------YLHLSASVPIYHRDIKSTNILLDDKYCA---KVSNFGTSRSRAVDQTHI 144
M YLH I HRDIK NILL++K K+ +FG S + D +
Sbjct: 150 NIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD--YK 204
Query: 145 TTQVHGTFGYLNPD----------DVCSFGVVLVELLTGAKPI 177
GT Y+ P+ DV S GV++ LL G P
Sbjct: 205 LRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPF 247
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 46/168 (27%)
Query: 41 VEKFINEVVIQSQINHINVVKLIGCCLET------------------KYMHDQNKELP-- 80
+ F E+ I + H N+VK G C Y+ + +
Sbjct: 73 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 132
Query: 81 --FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
+ Q+ +E GT Y+H RD+ + NIL++++ K+ +FG ++
Sbjct: 133 KLLQYTSQICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLP 183
Query: 139 VDQTHITTQVHG---TFGYLNPD-----------DVCSFGVVLVELLT 172
D+ + G F Y P+ DV SFGVVL EL T
Sbjct: 184 QDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 19/100 (19%)
Query: 110 HRDIKSTNILLDDKYCAKVSNFG-TSRSRAVDQTHITTQVHGTFGYLNPD---------- 158
HRD+K N+L D+ + K+ +FG ++ + H+ T G+ Y P+
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCC-GSLAYAAPELIQGKSYLGS 189
Query: 159 --DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKR 196
DV S G++L L+ G F F++D + + K R
Sbjct: 190 EADVWSMGILLYVLMCG-----FLPFDDDNVMALYKKIMR 224
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTS-RSRAVDQT------HITTQV 148
T YLH S+ + +RD+K N+L+D + +V++FG + R + T ++ ++
Sbjct: 174 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEI 230
Query: 149 HGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ GY D + GV++ E+ G P
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 16/119 (13%)
Query: 80 PFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAV 139
P T E + S + + M +L +S HRD+ + NILL + K+ +FG +R
Sbjct: 195 PITMEDLISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYK 251
Query: 140 DQTHITT-QVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPIRFTTFEED 185
+ ++ ++ P+ DV S+GV+L E+ + G P +ED
Sbjct: 252 NPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDED 310
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 25/127 (19%)
Query: 67 LETKYMHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCA 126
L +K+ +E+ + ++ I+I++ + Y+H RDIK NIL+D
Sbjct: 164 LLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH---------RDIKPDNILMDMNGHI 214
Query: 127 KVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD----------------DVCSFGVVLVEL 170
++++FG+ D T ++ GT Y++P+ D S GV + E+
Sbjct: 215 RLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEM 274
Query: 171 LTGAKPI 177
L G P
Sbjct: 275 LYGETPF 281
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 18/93 (19%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYL 155
T YLH S+ + +RD+K N+L+D + +V++FG ++ R + T + GT YL
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGR---TWXLAGTPEYL 205
Query: 156 NPD-----------DVCSFGVVLVELLTGAKPI 177
P+ D + GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 61/158 (38%), Gaps = 45/158 (28%)
Query: 110 HRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHG---TFGYL----------N 156
HRD+ + NIL++ + K+++FG ++ +D+ + G F Y
Sbjct: 134 HRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSR 193
Query: 157 PDDVCSFGVVLVELLT--------GAKPIRFTTFEEDKNIT------------------- 189
DV SFGVVL EL T A+ +R E D
Sbjct: 194 QSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPPAC 253
Query: 190 ---VAKHAKRCLNPSGKKRPAMKEVASELAGIKAWNGA 224
V + K C PS + RP+ + +L + W+G+
Sbjct: 254 PAEVHELMKLCWAPSPQDRPSFSALGPQLDML--WSGS 289
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 37/156 (23%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTW-EMQLRISIEASGT------- 96
+ E+ + +++H N++ L+ + H N L F + E L + I+ +
Sbjct: 60 LREIKLLQELSHPNIIGLLDA-----FGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHI 114
Query: 97 ----------MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS-----RAVDQ 141
+ YLH I HRD+K N+LLD+ K+++FG ++S RA
Sbjct: 115 KAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXH 171
Query: 142 THIT------TQVHGTFGYLNPDDVCSFGVVLVELL 171
+T + G Y D+ + G +L ELL
Sbjct: 172 QVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 22/99 (22%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILL---DDKYCAKVSNFGTSRSRAVDQTHITTQVHGTF 152
+ YLH + I HRD+K N+LL ++ K+++FG S+ + +T + + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG--HSKILGETSLMRTLCGTP 180
Query: 153 GYLNPD--------------DVCSFGVVLVELLTGAKPI 177
YL P+ D S GV+L L+G P
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 22/99 (22%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILL---DDKYCAKVSNFGTSRSRAVDQTHITTQVHGTF 152
+ YLH + I HRD+K N+LL ++ K+++FG S+ + +T + + GT
Sbjct: 132 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG--HSKILGETSLMRTLCGTP 186
Query: 153 GYLNPD--------------DVCSFGVVLVELLTGAKPI 177
YL P+ D S GV+L L+G P
Sbjct: 187 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 225
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 22/99 (22%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILL---DDKYCAKVSNFGTSRSRAVDQTHITTQVHGTF 152
+ YLH + I HRD+K N+LL ++ K+++FG S+ + +T + + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG--HSKILGETSLMRTLCGTP 180
Query: 153 GYLNPD--------------DVCSFGVVLVELLTGAKPI 177
YL P+ D S GV+L L+G P
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 22/99 (22%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILL---DDKYCAKVSNFGTSRSRAVDQTHITTQVHGTF 152
+ YLH + I HRD+K N+LL ++ K+++FG S+ + +T + + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG--HSKILGETSLMRTLCGTP 180
Query: 153 GYLNPD--------------DVCSFGVVLVELLTGAKPI 177
YL P+ D S GV+L L+G P
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 22/99 (22%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILL---DDKYCAKVSNFGTSRSRAVDQTHITTQVHGTF 152
+ YLH + I HRD+K N+LL ++ K+++FG S+ + +T + + GT
Sbjct: 125 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG--HSKILGETSLMRTLCGTP 179
Query: 153 GYLNPD--------------DVCSFGVVLVELLTGAKPI 177
YL P+ D S GV+L L+G P
Sbjct: 180 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 218
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 39/166 (23%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEMQ--------------L 87
++ ++E + + +++ +V +L+G CL T + + +PF + L
Sbjct: 69 KEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL 127
Query: 88 RISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQ 147
++ + M+YL V HRD+ + N+L+ K+++FG ++ ++ +
Sbjct: 128 NWCVQIAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KE 180
Query: 148 VHGTFG----------------YLNPDDVCSFGVVLVELLT-GAKP 176
H G Y + DV S+GV + EL+T G+KP
Sbjct: 181 YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 17/96 (17%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKY----CAKVSNFGTSRS-RAVDQTHITTQVHG 150
T+ YLH S + HRD+K +NIL D+ C ++ +FG ++ RA + +T
Sbjct: 133 TVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA 189
Query: 151 TF---------GYLNPDDVCSFGVVLVELLTGAKPI 177
F GY D+ S G++L +L G P
Sbjct: 190 NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 63/161 (39%), Gaps = 40/161 (24%)
Query: 87 LRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITT 146
L I I+ + + +LH S + HRD+K +NI KV +FG + D+ T
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 147 ------------QVHGTFGYLNPD-----------DVCSFGVVLVELL------------ 171
QV GT Y++P+ D+ S G++L ELL
Sbjct: 224 LTPMPAYATHXGQV-GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRI 282
Query: 172 -TGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAMKEV 211
T + ++F K + L+PS +RP ++
Sbjct: 283 ITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDI 323
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 149 LKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIM 205
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 206 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 258
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 259 KKISSESA 266
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 209
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 209
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 209
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 174 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 229
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 209
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 209
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWTLCGTPEYLAPE 209
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 247
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 248 KKISSESA 255
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 174 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 229
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 67/170 (39%), Gaps = 50/170 (29%)
Query: 41 VEKFINEVVIQSQINHINVVKLIGCCLET------------------KYMH------DQN 76
+ F E+ I + H N+VK G C Y+ D
Sbjct: 56 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 115
Query: 77 KELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS 136
K L +T Q+ +E GT Y+H R++ + NIL++++ K+ +FG ++
Sbjct: 116 KLLQYT--SQICKGMEYLGTKRYIH---------RNLATRNILVENENRVKIGDFGLTKV 164
Query: 137 RAVDQTHITTQVHG---TFGYLNPD-----------DVCSFGVVLVELLT 172
D+ + + G F Y P+ DV SFGVVL EL T
Sbjct: 165 LPQDKEYYKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 94/242 (38%), Gaps = 79/242 (32%)
Query: 40 KVEKFINEVVIQSQINHINVVKLIGCCLETK----------------------------- 70
K+ ++EV++ + +NH VV+ LE +
Sbjct: 45 KLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYD 104
Query: 71 YMHDQN--KELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKV 128
+H +N ++ W + R +EA +SY+H S I HRD+K NI +D+ K+
Sbjct: 105 LIHSENLNQQRDEYWRL-FRQILEA---LSYIH---SQGIIHRDLKPMNIFIDESRNVKI 157
Query: 129 SNFGTSRS--RAVDQTHITTQ-----------------------VHGTFGYLNPDDVCSF 163
+FG +++ R++D + +Q + GT Y D+ S
Sbjct: 158 GDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSL 217
Query: 164 GVVLVELL----TGA------KPIRFTTFE-----EDKNITVAKHAKRCL-NPSGKKRPA 207
G++ E++ TG K +R + E +D + V K R L + KRP
Sbjct: 218 GIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPG 277
Query: 208 MK 209
+
Sbjct: 278 AR 279
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 209
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 17/96 (17%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKY----CAKVSNFGTSRS-RAVDQTHITTQVHG 150
T+ YLH S + HRD+K +NIL D+ C ++ +FG ++ RA + +T
Sbjct: 133 TVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA 189
Query: 151 TF---------GYLNPDDVCSFGVVLVELLTGAKPI 177
F GY D+ S G++L +L G P
Sbjct: 190 NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 143 LKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIM 199
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 252
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 253 KKISSESA 260
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 148 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 203
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 204 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 94/242 (38%), Gaps = 79/242 (32%)
Query: 40 KVEKFINEVVIQSQINHINVVKLIGCCLETK----------------------------- 70
K+ ++EV++ + +NH VV+ LE +
Sbjct: 45 KLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYD 104
Query: 71 YMHDQN--KELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKV 128
+H +N ++ W + R +EA +SY+H S I HRD+K NI +D+ K+
Sbjct: 105 LIHSENLNQQRDEYWRL-FRQILEA---LSYIH---SQGIIHRDLKPMNIFIDESRNVKI 157
Query: 129 SNFGTSRS--RAVDQTHITTQ-----------------------VHGTFGYLNPDDVCSF 163
+FG +++ R++D + +Q + GT Y D+ S
Sbjct: 158 GDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSL 217
Query: 164 GVVLVELL----TGA------KPIRFTTFE-----EDKNITVAKHAKRCL-NPSGKKRPA 207
G++ E++ TG K +R + E +D + V K R L + KRP
Sbjct: 218 GIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPG 277
Query: 208 MK 209
+
Sbjct: 278 AR 279
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 98/278 (35%), Gaps = 79/278 (28%)
Query: 19 SFNVNRILGQGGQDIVYKG----------MAKVEKF-----------INEVVIQSQINHI 57
+F + + +G+G VY+ + KV+ F I E+ + Q+NH
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 58 NVVKLIGCCLE-------------------TKYMHDQNKELP--FTWEMQLRISIEASGT 96
NV+K +E K+ Q + +P W + ++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVW----KYFVQLCSA 148
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLN 156
+ ++H S + HRDIK N+ + K+ + G R + T + V GT Y++
Sbjct: 149 LEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMS 204
Query: 157 PD-----------DVCSFGVVLVELLTGAKPI---RFTTFEEDKNITVAKH--------- 193
P+ D+ S G +L E+ P + + K I +
Sbjct: 205 PERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYS 264
Query: 194 ------AKRCLNPSGKKRPAMKEVASELAGIKAWNGAS 225
C+NP +KRP + V + A +S
Sbjct: 265 EELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASS 302
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 143 LKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIM 199
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 252
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 253 KKISSESA 260
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 93/243 (38%), Gaps = 67/243 (27%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTW--------EMQLRISIEA 93
E+F +E ++++++ H NVV L+G + DQ + F++ + +R
Sbjct: 74 EEFRHEAMLRARLQHPNVVCLLGVVTK-----DQPLSMIFSYCSHGDLHEFLVMRSPHSD 128
Query: 94 SGTMS-------------YLHLSASVP----------IYHRDIKSTNILLDDKYCAKVSN 130
G+ ++HL A + + H+D+ + N+L+ DK K+S+
Sbjct: 129 VGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISD 188
Query: 131 FGTSRS-RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPI 177
G R A D + ++ P+ D+ S+GVVL E+ + G +P
Sbjct: 189 LGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY 248
Query: 178 ---------------RFTTFEEDKNITVAKHAKRCLNPSGKKRPAMKEVASELAGIKAWN 222
+ +D V C N +RP K++ S L +AW
Sbjct: 249 CGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL---RAWG 305
Query: 223 GAS 225
S
Sbjct: 306 NLS 308
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 12/103 (11%)
Query: 86 QLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHIT 145
+ R A+ +S L I +RD+K N+LLD + K+++FG + + T
Sbjct: 123 EARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV-TT 181
Query: 146 TQVHGTFGYLNPD-----------DVCSFGVVLVELLTGAKPI 177
GT Y+ P+ D + GV+L E+L G P
Sbjct: 182 ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPF 224
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 146 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 201
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 22/99 (22%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILL---DDKYCAKVSNFGTSRSRAVDQTHITTQVHGTF 152
+ YLH + I HRD+K N+LL ++ K+++FG S+ + +T + + GT
Sbjct: 251 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG--HSKILGETSLMRTLCGTP 305
Query: 153 GYLNPD--------------DVCSFGVVLVELLTGAKPI 177
YL P+ D S GV+L L+G P
Sbjct: 306 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 67/162 (41%), Gaps = 22/162 (13%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETK--------YMHDQNKELPFTWEMQ 86
++ ++ E+V+ +NH N++ L+ K Y+ + + + +Q
Sbjct: 61 FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ 120
Query: 87 LRISIEASGTMSYLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS----- 136
+ + E + Y L S I HRD+K +NI++ K+ +FG +R+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF 180
Query: 137 ----RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELLTGA 174
V + + +V GY D+ S G ++ E++ G
Sbjct: 181 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 222
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 146 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 201
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 15/97 (15%)
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD 158
YLH + + HRD+K N+ L++ K+ +FG + D T + GT Y+ P+
Sbjct: 132 YLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPE 187
Query: 159 -----------DVCSFGVVLVELLTGAKPIRFTTFEE 184
DV S G ++ LL G P + +E
Sbjct: 188 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE 224
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 69/163 (42%), Gaps = 24/163 (14%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEM--------- 85
++ ++ E+V+ +NH N++ L+ K + ++ +++ E+
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL-EEFQDVYIVMELMDANLCQVI 119
Query: 86 QLRISIEASGTMSYLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS---- 136
Q+ + E + Y L S I HRD+K +NI++ K+ +FG +R+
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 137 -----RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELLTGA 174
V + + +V GY D+ S G ++ E++ G
Sbjct: 180 FMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 222
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 15/97 (15%)
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD 158
YLH + + HRD+K N+ L++ K+ +FG + D T + GT Y+ P+
Sbjct: 132 YLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPE 187
Query: 159 -----------DVCSFGVVLVELLTGAKPIRFTTFEE 184
DV S G ++ LL G P + +E
Sbjct: 188 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE 224
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 63/150 (42%), Gaps = 22/150 (14%)
Query: 47 EVVIQSQINHINVVKLIGCCLETK--------YMHDQNKELPFTWEMQLRISIEASGTMS 98
E+V+ +NH N++ L+ K Y+ + + + +Q+ + E +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLL 132
Query: 99 YLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS---------RAVDQTHI 144
Y L S I HRD+K +NI++ K+ +FG +R+ V + +
Sbjct: 133 YQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 145 TTQVHGTFGYLNPDDVCSFGVVLVELLTGA 174
+V GY D+ S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGG 222
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 15/97 (15%)
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD 158
YLH + + HRD+K N+ L++ K+ +FG + D T + GT Y+ P+
Sbjct: 136 YLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPE 191
Query: 159 -----------DVCSFGVVLVELLTGAKPIRFTTFEE 184
DV S G ++ LL G P + +E
Sbjct: 192 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE 228
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 139 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWTLCGTPEYLAPE 194
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 195 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 140 LKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIM 196
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 249
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 250 KKISSESA 257
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 144 LKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIM 200
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 253
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 254 KKISSESA 261
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVH------ 149
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 150 -GTFGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 195 LNAMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 247
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 248 KKISSESA 255
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+++D + +V++FG ++ R +T ++ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAK-RVKGRTWXLCGTPEYLAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 70/171 (40%), Gaps = 44/171 (25%)
Query: 41 VEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKE-LPFTWEM-------------- 85
+E+ E+ I +++H NVVKL+ + + D N++ L +E+
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLV------EVLDDPNEDHLYMVFELVNQGPVMEVPTLKP 133
Query: 86 ----QLRISI-EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVD 140
Q R + + YLH I HRDIK +N+L+ + K+++FG S
Sbjct: 134 LSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGS 190
Query: 141 QTHITTQVHGTFGYLNPD--------------DVCSFGVVLVELLTGAKPI 177
++ V GT ++ P+ DV + GV L + G P
Sbjct: 191 DALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 69/163 (42%), Gaps = 24/163 (14%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEM--------- 85
++ ++ E+V+ +NH N++ L+ K + ++ +++ E+
Sbjct: 63 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL-EEFQDVYIVMELMDANLCQVI 121
Query: 86 QLRISIEASGTMSYLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA-- 138
Q+ + E + Y L S I HRD+K +NI++ K+ +FG +R+
Sbjct: 122 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 181
Query: 139 -------VDQTHITTQVHGTFGYLNPDDVCSFGVVLVELLTGA 174
V + + +V GY D+ S G ++ E++ G
Sbjct: 182 FMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 224
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 22/106 (20%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDK---YCAKVSNFGTSRSRAVDQTHITTQVHGTF 152
++++ HL+ I HRD+K N+LL K K+++FG + DQ GT
Sbjct: 115 SVNHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTP 170
Query: 153 GYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEEDKN 187
GYL+P+ D+ + GV+L LL G P ++ED++
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF----WDEDQH 212
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 22/99 (22%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILL---DDKYCAKVSNFGTSRSRAVDQTHITTQVHGTF 152
+ YLH + I HRD+K N+LL ++ K+++FG S+ + +T + + GT
Sbjct: 265 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG--HSKILGETSLMRTLCGTP 319
Query: 153 GYLNPD--------------DVCSFGVVLVELLTGAKPI 177
YL P+ D S GV+L L+G P
Sbjct: 320 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 358
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 67/162 (41%), Gaps = 22/162 (13%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETK--------YMHDQNKELPFTWEMQ 86
++ ++ E+V+ +NH N++ L+ K Y+ + + + +Q
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ 120
Query: 87 LRISIEASGTMSYLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS----- 136
+ + E + Y L S I HRD+K +NI++ K+ +FG +R+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF 180
Query: 137 ----RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELLTGA 174
V + + +V GY D+ S G ++ E++ G
Sbjct: 181 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 222
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 22/106 (20%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDK---YCAKVSNFGTSRSRAVDQTHITTQVHGTF 152
++++ HL+ I HRD+K N+LL K K+++FG + DQ GT
Sbjct: 115 SVNHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTP 170
Query: 153 GYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEEDKN 187
GYL+P+ D+ + GV+L LL G P ++ED++
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF----WDEDQH 212
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 149 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 205
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 206 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 258
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 259 KKISSESA 266
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 61/152 (40%), Gaps = 32/152 (21%)
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITT-Q 147
S + + M++L AS HRD+ + NILL K+ +FG +R D ++
Sbjct: 166 FSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 222
Query: 148 VHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPI--------RFTTFEEDKN 187
++ P+ DV S+G+ L EL + G+ P + +E
Sbjct: 223 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR 282
Query: 188 ITVAKHA--------KRCLNPSGKKRPAMKEV 211
+ +HA K C + KRP K++
Sbjct: 283 MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 314
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 140 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 196
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 249
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 250 KKISSESA 257
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 161 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 217
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 218 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 270
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 271 KKISSESA 278
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 157 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 213
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 214 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 266
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 267 KKISSESA 274
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 158 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 214
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 267
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 268 KKISSESA 275
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 157 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 213
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 214 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 266
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 267 KKISSESA 274
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 247
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 248 KKISSESA 255
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 61/152 (40%), Gaps = 32/152 (21%)
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITT-Q 147
S + + M++L AS HRD+ + NILL K+ +FG +R D ++
Sbjct: 168 FSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 224
Query: 148 VHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPI--------RFTTFEEDKN 187
++ P+ DV S+G+ L EL + G+ P + +E
Sbjct: 225 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR 284
Query: 188 ITVAKHA--------KRCLNPSGKKRPAMKEV 211
+ +HA K C + KRP K++
Sbjct: 285 MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 316
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+++D + +V++FG ++ R +T ++ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSR--------SRAVDQT--HITTQVHGTFGYLNP 157
I HRDIKS NI L ++ +FG +R +RA T +++ ++ Y N
Sbjct: 146 ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNK 205
Query: 158 DDVCSFGVVLVELLT 172
D+ + G VL EL T
Sbjct: 206 SDIWALGCVLYELCT 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 140 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 196
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 249
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 250 KKISSESA 257
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 61/152 (40%), Gaps = 32/152 (21%)
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITT-Q 147
S + + M++L AS HRD+ + NILL K+ +FG +R D ++
Sbjct: 173 FSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 229
Query: 148 VHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPI--------RFTTFEEDKN 187
++ P+ DV S+G+ L EL + G+ P + +E
Sbjct: 230 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR 289
Query: 188 ITVAKHA--------KRCLNPSGKKRPAMKEV 211
+ +HA K C + KRP K++
Sbjct: 290 MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 321
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 150 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 206
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 259
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 260 KKISSESA 267
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 158 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 214
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 267
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 268 KKISSESA 275
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 247
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 248 KKISSESA 255
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 150 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 206
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 259
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 260 KKISSESA 267
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 135 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 191
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 192 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 244
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 245 KKISSESA 252
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 23/152 (15%)
Query: 45 INEVVIQSQINHINVVKLIGC-------CLETKYMHDQNKELPFTWEMQLRISIEASGTM 97
I E+ I ++ H N+VKL L +++ K+L E L S +
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL 107
Query: 98 SYLHLSASVP---IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGY 154
L+ A + HRD+K N+L++ + K+++FG +R+ + T +V T Y
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEV-VTLWY 166
Query: 155 LNPD------------DVCSFGVVLVELLTGA 174
PD D+ S G + E++ G
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 14/89 (15%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKY-CAKVSNFGTSRSRAVDQTHITT-------- 146
+++Y+H S+ I HRDIK N+LLD K+ +FG+++ + +++
Sbjct: 153 SLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRA 209
Query: 147 --QVHGTFGYLNPDDVCSFGVVLVELLTG 173
+ G Y D+ S G V+ EL+ G
Sbjct: 210 PELIFGATNYTTNIDIWSTGCVMAELMQG 238
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 247
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 248 KKISSESA 255
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 88/221 (39%), Gaps = 76/221 (34%)
Query: 26 LGQGGQDIVYKGMAK--------------------VEKFINEVVIQSQIN-HINVVKLIG 64
LG+G IV+K + + ++ E++I ++++ H N+V L+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 65 CCLETKYMHDQNKELPFTW-EMQLRISIEAS---------------GTMSYLHLSASVPI 108
+ +D++ L F + E L I A+ + YLH S +
Sbjct: 77 VL---RADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLH---SGGL 130
Query: 109 YHRDIKSTNILLDDKYCAKVSNFGTSRS----RAV----------------DQTHITTQV 148
HRD+K +NILL+ + KV++FG SRS R V D I T
Sbjct: 131 LHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDY 190
Query: 149 HGTFGYLNPD------------DVCSFGVVLVELLTGAKPI 177
T Y P+ D+ S G +L E+L G KPI
Sbjct: 191 VATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPI 230
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 136 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 192
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 193 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 245
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 246 KKISSESA 253
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 145 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 201
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 254
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 255 KKISSESA 262
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 24/125 (19%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D ++ K+ +FG+ A+ + + T GT Y P+
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGTRVYSPPEWIRYHRYH 192
Query: 159 ----DVCSFGVVLVELLTGAKP-------IRFTTFEEDKNITVAKHAKR-CLNPSGKKRP 206
V S G++L +++ G P IR F + + +H R CL RP
Sbjct: 193 GRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRP 252
Query: 207 AMKEV 211
+E+
Sbjct: 253 TFEEI 257
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 247
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 248 KKISSESA 255
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 150 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 206
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 259
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 260 KKISSESA 267
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 144 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 200
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 253
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 254 KKISSESA 261
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 247
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 248 KKISSESA 255
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 134 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 190
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 243
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 244 KKISSESA 251
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 247
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 248 KKISSESA 255
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 247
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 248 KKISSESA 255
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 247
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 248 KKISSESA 255
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 143 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 199
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 252
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 253 KKISSESA 260
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 247
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 248 KKISSESA 255
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 140 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 196
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 249
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 250 KKISSESA 257
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 137 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 193
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 194 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 246
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 247 KKISSESA 254
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 24/125 (19%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D ++ K+ +FG+ A+ + + T GT Y P+
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGTRVYSPPEWIRYHRYH 192
Query: 159 ----DVCSFGVVLVELLTGAKP-------IRFTTFEEDKNITVAKHAKR-CLNPSGKKRP 206
V S G++L +++ G P IR F + + +H R CL RP
Sbjct: 193 GRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRP 252
Query: 207 AMKEV 211
+E+
Sbjct: 253 TFEEI 257
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 24/125 (19%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D ++ K+ +FG S A+ + + T GT Y P+
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH 234
Query: 159 ----DVCSFGVVLVELLTGAKP-------IRFTTFEEDKNITVAKHAKR-CLNPSGKKRP 206
V S G++L +++ G P IR F + + +H R CL RP
Sbjct: 235 GRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRP 294
Query: 207 AMKEV 211
+E+
Sbjct: 295 TFEEI 299
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 24/125 (19%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D ++ K+ +FG+ A+ + + T GT Y P+
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGTRVYSPPEWIRYHRYH 191
Query: 159 ----DVCSFGVVLVELLTGAKP-------IRFTTFEEDKNITVAKHAKR-CLNPSGKKRP 206
V S G++L +++ G P IR F + + +H R CL RP
Sbjct: 192 GRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRP 251
Query: 207 AMKEV 211
+E+
Sbjct: 252 TFEEI 256
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 24/125 (19%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D ++ K+ +FG+ A+ + + T GT Y P+
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGTRVYSPPEWIRYHRYH 192
Query: 159 ----DVCSFGVVLVELLTGAKP-------IRFTTFEEDKNITVAKHAKR-CLNPSGKKRP 206
V S G++L +++ G P IR F + + +H R CL RP
Sbjct: 193 GRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRP 252
Query: 207 AMKEV 211
+E+
Sbjct: 253 TFEEI 257
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 135 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 191
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 192 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 244
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 245 KKISSESA 252
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 148 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 204
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 205 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 257
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 258 KKISSESA 265
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 24/125 (19%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D ++ K+ +FG+ A+ + + T GT Y P+
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGTRVYSPPEWIRYHRYH 187
Query: 159 ----DVCSFGVVLVELLTGAKP-------IRFTTFEEDKNITVAKHAKR-CLNPSGKKRP 206
V S G++L +++ G P IR F + + +H R CL RP
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRP 247
Query: 207 AMKEV 211
+E+
Sbjct: 248 TFEEI 252
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 24/125 (19%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D ++ K+ +FG+ A+ + + T GT Y P+
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGTRVYSPPEWIRYHRYH 191
Query: 159 ----DVCSFGVVLVELLTGAKP-------IRFTTFEEDKNITVAKHAKR-CLNPSGKKRP 206
V S G++L +++ G P IR F + + +H R CL RP
Sbjct: 192 GRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRP 251
Query: 207 AMKEV 211
+E+
Sbjct: 252 TFEEI 256
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 24/125 (19%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D ++ K+ +FG+ A+ + + T GT Y P+
Sbjct: 170 VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGTRVYSPPEWIRYHRYH 226
Query: 159 ----DVCSFGVVLVELLTGAKP-------IRFTTFEEDKNITVAKHAKR-CLNPSGKKRP 206
V S G++L +++ G P IR F + + +H R CL RP
Sbjct: 227 GRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRP 286
Query: 207 AMKEV 211
+E+
Sbjct: 287 TFEEI 291
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 69/163 (42%), Gaps = 24/163 (14%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEM--------- 85
++ ++ E+V+ +NH N++ L+ K + ++ +++ E+
Sbjct: 62 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL-EEFQDVYIVMELMDANLCQVI 120
Query: 86 QLRISIEASGTMSYLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS---- 136
Q+ + E + Y L S I HRD+K +NI++ K+ +FG +R+
Sbjct: 121 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 180
Query: 137 -----RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELLTGA 174
V + + +V GY D+ S G ++ E++ G
Sbjct: 181 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 223
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEM--------- 85
++ ++ E+V+ +NH N++ L+ K + ++ +++ E+
Sbjct: 61 FQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTL-EEFQDVYLVMELMDANLXQVI 119
Query: 86 QLRISIEASGTMSYLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS---- 136
Q+ + E + Y L S I HRD+K +NI++ K+ +FG +R+
Sbjct: 120 QMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 179
Query: 137 -----RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELL 171
V + + +V GY D+ S G ++ E++
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 134 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 190
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 243
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 244 KKISSESA 251
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 23/155 (14%)
Query: 85 MQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHI 144
+ L + + + + Y+H S + +RD+K +NI L D K+ +FG S D
Sbjct: 123 LALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRX 179
Query: 145 TTQVHGTFGYLNPD-----------DVCSFGVVLVELL----TGAKPIRFTTFEEDKNIT 189
++ GT Y++P+ D+ + G++L ELL T + +F T D I+
Sbjct: 180 RSK--GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIIS 237
Query: 190 --VAKHAKRCLNPSGKKRPAMKEVASE-LAGIKAW 221
K K L K+P + SE L + W
Sbjct: 238 DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW 272
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 69/163 (42%), Gaps = 24/163 (14%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEM--------- 85
++ ++ E+V+ +NH N++ L+ K + ++ +++ E+
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL-EEFQDVYIVMELMDANLCQVI 119
Query: 86 QLRISIEASGTMSYLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS---- 136
Q+ + E + Y L S I HRD+K +NI++ K+ +FG +R+
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 137 -----RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELLTGA 174
V + + +V GY D+ S G ++ E++ G
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 222
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 143 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 199
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 252
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 253 KKISSESA 260
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 24/125 (19%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D ++ K+ +FG S A+ + + T GT Y P+
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH 206
Query: 159 ----DVCSFGVVLVELLTGAKP-------IRFTTFEEDKNITVAKHAKR-CLNPSGKKRP 206
V S G++L +++ G P IR F + + +H R CL RP
Sbjct: 207 GRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRP 266
Query: 207 AMKEV 211
+E+
Sbjct: 267 TFEEI 271
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 24/125 (19%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D ++ K+ +FG+ A+ + + T GT Y P+
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGTRVYSPPEWIRYHRYH 190
Query: 159 ----DVCSFGVVLVELLTGAKP-------IRFTTFEEDKNITVAKHAKR-CLNPSGKKRP 206
V S G++L +++ G P IR F + + +H R CL RP
Sbjct: 191 GRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRP 250
Query: 207 AMKEV 211
+E+
Sbjct: 251 TFEEI 255
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 67/162 (41%), Gaps = 22/162 (13%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETK--------YMHDQNKELPFTWEMQ 86
++ ++ E+V+ +NH N++ L+ K Y+ + + + +Q
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ 120
Query: 87 LRISIEASGTMSYLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS----- 136
+ + E + Y L S I HRD+K +NI++ K+ +FG +R+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 180
Query: 137 ----RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELLTGA 174
V + + +V GY D+ S G ++ E++ G
Sbjct: 181 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 222
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 92/239 (38%), Gaps = 67/239 (28%)
Query: 42 EKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTW--------EMQLRISIEA 93
E+F +E ++++++ H NVV L+G + DQ + F++ + +R
Sbjct: 57 EEFRHEAMLRARLQHPNVVCLLGVVTK-----DQPLSMIFSYCSHGDLHEFLVMRSPHSD 111
Query: 94 SGTMS-------------YLHLSASVP----------IYHRDIKSTNILLDDKYCAKVSN 130
G+ ++HL A + + H+D+ + N+L+ DK K+S+
Sbjct: 112 VGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISD 171
Query: 131 FGTSRS-RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPI 177
G R A D + ++ P+ D+ S+GVVL E+ + G +P
Sbjct: 172 LGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY 231
Query: 178 ---------------RFTTFEEDKNITVAKHAKRCLNPSGKKRPAMKEVASELAGIKAW 221
+ +D V C N +RP K++ S L +AW
Sbjct: 232 CGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL---RAW 287
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 24/125 (19%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D ++ K+ +FG S A+ + + T GT Y P+
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 159 ----DVCSFGVVLVELLTGAKP-------IRFTTFEEDKNITVAKHAKR-CLNPSGKKRP 206
V S G++L +++ G P IR F + + +H R CL RP
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRP 279
Query: 207 AMKEV 211
+E+
Sbjct: 280 TFEEI 284
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 24/125 (19%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D ++ K+ +FG+ A+ + + T GT Y P+
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGTRVYSPPEWIRYHRYH 234
Query: 159 ----DVCSFGVVLVELLTGAKP-------IRFTTFEEDKNITVAKHAKR-CLNPSGKKRP 206
V S G++L +++ G P IR F + + +H R CL RP
Sbjct: 235 GRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRP 294
Query: 207 AMKEV 211
+E+
Sbjct: 295 TFEEI 299
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 24/125 (19%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D ++ K+ +FG S A+ + + T GT Y P+
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH 207
Query: 159 ----DVCSFGVVLVELLTGAKP-------IRFTTFEEDKNITVAKHAKR-CLNPSGKKRP 206
V S G++L +++ G P IR F + + +H R CL RP
Sbjct: 208 GRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRP 267
Query: 207 AMKEV 211
+E+
Sbjct: 268 TFEEI 272
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 94/235 (40%), Gaps = 76/235 (32%)
Query: 15 KATDSFNVNRILGQGGQDIVYK------GMAKVEKFIN--------------EVVIQSQI 54
K +D+++V LG+G +V + G+ K IN E I ++
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 55 NHINVVKLIGCCLETKYMHDQNKELPFTWEM----------------QLRISIEASG--- 95
H N+V+L HD +E F + + + +AS
Sbjct: 63 QHPNIVRL----------HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ 112
Query: 96 ----TMSYLHLSASVPIYHRDIKSTNILLDDK---YCAKVSNFGTSRSRAVDQTHITTQV 148
+++Y H S I HR++K N+LL K K+++FG + V+ +
Sbjct: 113 QILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE--VNDSEAWHGF 167
Query: 149 HGTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAK 192
GT GYL+P+ D+ + GV+L LL G P ++ED++ A+
Sbjct: 168 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF----WDEDQHRLYAQ 218
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 61/152 (40%), Gaps = 32/152 (21%)
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITT-Q 147
S + + M++L AS HRD+ + NILL K+ +FG +R D ++
Sbjct: 173 FSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGN 229
Query: 148 VHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPI--------RFTTFEEDKN 187
++ P+ DV S+G+ L EL + G+ P + +E
Sbjct: 230 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR 289
Query: 188 ITVAKHA--------KRCLNPSGKKRPAMKEV 211
+ +HA K C + KRP K++
Sbjct: 290 MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 321
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 134 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 190
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 243
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 244 KKISSESA 251
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPA 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 61/152 (40%), Gaps = 32/152 (21%)
Query: 89 ISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITT-Q 147
S + + M++L AS HRD+ + NILL K+ +FG +R D ++
Sbjct: 150 FSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 206
Query: 148 VHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKPI--------RFTTFEEDKN 187
++ P+ DV S+G+ L EL + G+ P + +E
Sbjct: 207 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR 266
Query: 188 ITVAKHA--------KRCLNPSGKKRPAMKEV 211
+ +HA K C + KRP K++
Sbjct: 267 MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 298
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 69/163 (42%), Gaps = 24/163 (14%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEM--------- 85
++ ++ E+V+ +NH N++ L+ K + ++ +++ E+
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL-EEFQDVYIVMELMDANLCQVI 119
Query: 86 QLRISIEASGTMSYLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS---- 136
Q+ + E + Y L S I HRD+K +NI++ K+ +FG +R+
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 137 -----RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELLTGA 174
V + + +V GY D+ S G ++ E++ G
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 222
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 19/94 (20%)
Query: 108 IYHRDIKSTNILLDDK---YCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD------ 158
+ HRD+K N+LL K K+++FG + DQ GT GYL+P+
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEVLRKEA 182
Query: 159 -----DVCSFGVVLVELLTGAKPIRFTTFEEDKN 187
D+ + GV+L LL G P ++ED++
Sbjct: 183 YGKPVDIWACGVILYILLVGYPPF----WDEDQH 212
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 23/152 (15%)
Query: 45 INEVVIQSQINHINVVKLIGC-------CLETKYMHDQNKELPFTWEMQLRISIEASGTM 97
I E+ I ++ H N+VKL L +++ K+L E L S +
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL 107
Query: 98 SYLHLSASVP---IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGY 154
L+ A + HRD+K N+L++ + K+++FG +R+ + T ++ T Y
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEI-VTLWY 166
Query: 155 LNPD------------DVCSFGVVLVELLTGA 174
PD D+ S G + E++ G
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 88/217 (40%), Gaps = 52/217 (23%)
Query: 8 FISNELEKATDSFNVNRILGQG-------------GQDIVYKGMAK--------VEKFIN 46
F+ + +D + R+LG+G GQ+ K ++K E +
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 75
Query: 47 EVVIQSQINHINVVKLIGCCLETKYMHDQNK-----EL--------PFTWEMQLRISIEA 93
EV + Q++H N+ KL + Y + + EL F+ RI +
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 135
Query: 94 SGTMSYLHLSASVPIYHRDIKSTNILLDDK---YCAKVSNFGTS---------RSRAVDQ 141
++Y H + I HRD+K N+LL+ K ++ +FG S + +
Sbjct: 136 LSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTA 192
Query: 142 THITTQV-HGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+I +V HGT Y DV S GV+L LL+G P
Sbjct: 193 YYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPF 227
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 40/172 (23%)
Query: 82 TWEMQLRISIEASGTMSYLHLSASVP---------IYHRDIKSTNILLDDKYCAKVSNFG 132
+W I+ + ++YLH +P I HRDIKS N+LL + A +++FG
Sbjct: 119 SWNELCHIAETMARGLAYLH--EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG 176
Query: 133 TS----RSRAVDQTHITTQVHGTFGYLNPD----------------DVCSFGVVLVELLT 172
+ ++ TH QV GT Y+ P+ D+ + G+VL EL +
Sbjct: 177 LALKFEAGKSAGDTH--GQV-GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
Query: 173 ------GAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAMKEVASELAGI 218
G FEE+ + + + KKRP +++ + AG+
Sbjct: 234 RCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGM 285
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 94/235 (40%), Gaps = 76/235 (32%)
Query: 15 KATDSFNVNRILGQGGQDIVYK------GMAKVEKFIN--------------EVVIQSQI 54
K +D+++V LG+G +V + G+ K IN E I ++
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 55 NHINVVKLIGCCLETKYMHDQNKELPFTWEM----------------QLRISIEASG--- 95
H N+V+L HD +E F + + + +AS
Sbjct: 63 QHPNIVRL----------HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ 112
Query: 96 ----TMSYLHLSASVPIYHRDIKSTNILLDDK---YCAKVSNFGTSRSRAVDQTHITTQV 148
+++Y H S I HR++K N+LL K K+++FG + V+ +
Sbjct: 113 QILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE--VNDSEAWHGF 167
Query: 149 HGTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAK 192
GT GYL+P+ D+ + GV+L LL G P ++ED++ A+
Sbjct: 168 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF----WDEDQHRLYAQ 218
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 94/235 (40%), Gaps = 76/235 (32%)
Query: 15 KATDSFNVNRILGQGGQDIVYK------GMAKVEKFIN--------------EVVIQSQI 54
K +D+++V LG+G +V + G+ K IN E I ++
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 55 NHINVVKLIGCCLETKYMHDQNKELPFTWEM----------------QLRISIEASG--- 95
H N+V+L HD +E F + + + +AS
Sbjct: 62 QHPNIVRL----------HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ 111
Query: 96 ----TMSYLHLSASVPIYHRDIKSTNILLDDK---YCAKVSNFGTSRSRAVDQTHITTQV 148
+++Y H S I HR++K N+LL K K+++FG + V+ +
Sbjct: 112 QILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE--VNDSEAWHGF 166
Query: 149 HGTFGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAK 192
GT GYL+P+ D+ + GV+L LL G P ++ED++ A+
Sbjct: 167 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF----WDEDQHRLYAQ 217
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR--SRAVDQTHITTQVHGTFGY 154
+ Y+H S + HRD+K +N+L++ K+ +FG +R D T T+ T Y
Sbjct: 157 LKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWY 213
Query: 155 LNPD------------DVCSFGVVLVELLTGAKPI 177
P+ D+ S G +L E+L+ +PI
Sbjct: 214 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 247
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 144 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 200
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 253
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 254 KKISSESA 261
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 28/121 (23%)
Query: 76 NKELPFTWE----MQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNF 131
N ++P W ++ ++++A +M ++H RD+K N+LLD K+++F
Sbjct: 167 NYDVPEKWARFYTAEVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADF 217
Query: 132 GTSRSRAVDQTHITTQVHGTFGYLNPD---------------DVCSFGVVLVELLTGAKP 176
GT + GT Y++P+ D S GV L E+L G P
Sbjct: 218 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
Query: 177 I 177
Sbjct: 278 F 278
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 144 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 200
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 253
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 254 KKISSESA 261
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 28/121 (23%)
Query: 76 NKELPFTWE----MQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNF 131
N ++P W ++ ++++A +M ++H RD+K N+LLD K+++F
Sbjct: 162 NYDVPEKWARFYTAEVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADF 212
Query: 132 GTSRSRAVDQTHITTQVHGTFGYLNPD---------------DVCSFGVVLVELLTGAKP 176
GT + GT Y++P+ D S GV L E+L G P
Sbjct: 213 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
Query: 177 I 177
Sbjct: 273 F 273
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+++D + +V++FG ++ R +T ++ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IIISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 67/173 (38%), Gaps = 38/173 (21%)
Query: 35 YKGMAKVEKF---INEVVIQSQINHINVVKLIGCCLE-------TKYMHDQNKEL----- 79
Y G EK+ I EV ++ H N ++ GC L +Y +L
Sbjct: 89 YSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK 148
Query: 80 -PFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA 138
P ++ I+ G + L S + HRD+K+ NILL + K+ +FG++ A
Sbjct: 149 KPLQ---EVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205
Query: 139 VDQTHITTQVHGTFGYLNPD--------------DVCSFGVVLVELLTGAKPI 177
+ GT ++ P+ DV S G+ +EL P+
Sbjct: 206 PANXFV-----GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT--------HITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T ++ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEYLAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ ++ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 28/121 (23%)
Query: 76 NKELPFTWE----MQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNF 131
N ++P W ++ ++++A +M ++H RD+K N+LLD K+++F
Sbjct: 167 NYDVPEKWARFYTAEVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADF 217
Query: 132 GTSRSRAVDQTHITTQVHGTFGYLNPD---------------DVCSFGVVLVELLTGAKP 176
GT + GT Y++P+ D S GV L E+L G P
Sbjct: 218 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
Query: 177 I 177
Sbjct: 278 F 278
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH--------ITTQ 147
T YLH S+ + +RD+K N+L+D + +V++FG ++ R +T + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEALAPE 208
Query: 148 VHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+ + GY D + GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEM--------- 85
++ ++ E+V+ +NH N++ L+ K + ++ +++ E+
Sbjct: 61 FQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTL-EEFQDVYLVMELMDANLXQVI 119
Query: 86 QLRISIEASGTMSYLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS---- 136
Q+ + E + Y L S I HRD+K +NI++ K+ +FG +R+
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 179
Query: 137 -----RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELL 171
V + + +V GY D+ S G ++ E++
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG R + T ++ T+ +
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPEIM 194
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 247
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 248 KKISSESA 255
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 17/96 (17%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKY----CAKVSNFGTSRS-RAVDQTHITTQVHG 150
T+ YLH V HRD+K +NIL D+ ++ +FG ++ RA + +T
Sbjct: 128 TVEYLHAQGVV---HRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTA 184
Query: 151 TF---------GYLNPDDVCSFGVVLVELLTGAKPI 177
F GY D+ S GV+L +LTG P
Sbjct: 185 NFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILL---DDKYCAKVSNFGTSRSRAVDQTHITT------ 146
+S++H V + HRD+K N+L +D K+ +FG +R + D + T
Sbjct: 118 AVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLH 174
Query: 147 ----QVHGTFGYLNPDDVCSFGVVLVELLTGAKPIR 178
++ GY D+ S GV+L +L+G P +
Sbjct: 175 YAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQ 210
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEM--------- 85
++ ++ E+V+ +NH N++ L+ K + ++ +++ E+
Sbjct: 61 FQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTL-EEFQDVYLVMELMDANLCQVI 119
Query: 86 QLRISIEASGTMSYLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS---- 136
Q+ + E + Y L S I HRD+K +NI++ K+ +FG +R+
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 179
Query: 137 -----RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELL 171
V + + +V GY D+ S G ++ E++
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 24/125 (19%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D ++ K+ +FG+ A+ + + T GT Y P+
Sbjct: 158 VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGTRVYSPPEWIRYHRYH 214
Query: 159 ----DVCSFGVVLVELLTGAKP-------IRFTTFEEDKNITVAKHAKR-CLNPSGKKRP 206
V S G++L +++ G P IR F + +H R CL RP
Sbjct: 215 GRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPSDRP 274
Query: 207 AMKEV 211
+E+
Sbjct: 275 TFEEI 279
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 26/164 (15%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEMQ-----LRI 89
++ ++ E+V+ +NH N++ L+ K + ++ +++ E+ I
Sbjct: 59 FQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTL-EEFQDVYLVMELMDANLCQVI 117
Query: 90 SIEASGT-MSYL---------HLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA- 138
+E MSYL HL S I HRD+K +NI++ K+ +FG +R+ +
Sbjct: 118 HMELDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAST 176
Query: 139 --------VDQTHITTQVHGTFGYLNPDDVCSFGVVLVELLTGA 174
V + + +V GY D+ S G ++ EL+ G+
Sbjct: 177 NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGS 220
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ FG +R + T ++ T+ +
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 247
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 248 KKISSESA 255
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 24/125 (19%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D ++ K+ +FG+ A+ + + T GT Y P+
Sbjct: 183 VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGTRVYSPPEWIRYHRYH 239
Query: 159 ----DVCSFGVVLVELLTGAKP-------IRFTTFEEDKNITVAKHAKR-CLNPSGKKRP 206
V S G++L +++ G P IR F + +H R CL RP
Sbjct: 240 GRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPSDRP 299
Query: 207 AMKEV 211
+E+
Sbjct: 300 TFEEI 304
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 24/125 (19%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D ++ K+ +FG+ A+ + + T GT Y P+
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGTRVYSPPEWIRYHRYH 187
Query: 159 ----DVCSFGVVLVELLTGAKP-------IRFTTFEEDKNITVAKHAKR-CLNPSGKKRP 206
V S G++L +++ G P IR F + +H R CL RP
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPSDRP 247
Query: 207 AMKEV 211
+E+
Sbjct: 248 TFEEI 252
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 24/125 (19%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D ++ K+ +FG+ A+ + + T GT Y P+
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGTRVYSPPEWIRYHRYH 234
Query: 159 ----DVCSFGVVLVELLTGAKP-------IRFTTFEEDKNITVAKHAKR-CLNPSGKKRP 206
V S G++L +++ G P IR F + +H R CL RP
Sbjct: 235 GRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPSDRP 294
Query: 207 AMKEV 211
+E+
Sbjct: 295 TFEEI 299
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 16/125 (12%)
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGT 151
E + YLH +V +RD+K N++LD K+++FG + D + GT
Sbjct: 118 EIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGT 174
Query: 152 FGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAK--RCL 198
YL P+ D GVV+ E++ G P E+ + + + + R L
Sbjct: 175 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTL 234
Query: 199 NPSGK 203
P K
Sbjct: 235 GPEAK 239
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 24/125 (19%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D ++ K+ +FG S A+ + + T GT Y P+
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH 207
Query: 159 ----DVCSFGVVLVELLTGAKP-------IRFTTFEEDKNITVAKHAKR-CLNPSGKKRP 206
V S G++L +++ G P IR F + +H R CL RP
Sbjct: 208 GRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPSDRP 267
Query: 207 AMKEV 211
+E+
Sbjct: 268 TFEEI 272
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 31/159 (19%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMH-------------DQNKELPFTWEMQLRISI 91
+ EV + +++H N++KL ++ + + K F+ RI
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK 128
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLD--DKYC-AKVSNFGTSRSRAVDQTHITTQV 148
+ ++Y+H I HRD+K NILL+ +K C K+ +FG S Q
Sbjct: 129 QVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGL--STCFQQNTKMKDR 183
Query: 149 HGTFGYLNPD----------DVCSFGVVLVELLTGAKPI 177
GT Y+ P+ DV S GV+L LL+G P
Sbjct: 184 IGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 67/175 (38%), Gaps = 42/175 (24%)
Query: 35 YKGMAKVEKF---INEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEM------ 85
Y G EK+ I EV ++ H N ++ GC Y+ + L + +
Sbjct: 50 YSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGC-----YLREHTAWLVMEYCLGSASDL 104
Query: 86 ---------QLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS 136
++ I+ G + L S + HRD+K+ NILL + K+ +FG++
Sbjct: 105 LEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASI 164
Query: 137 RAVDQTHITTQVHGTFGYLNPD--------------DVCSFGVVLVELLTGAKPI 177
A + GT ++ P+ DV S G+ +EL P+
Sbjct: 165 MAPANXFV-----GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 32/135 (23%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHG---TFG 153
+ Y+H S I HRD+K +N+ +++ K+ +FG +R H ++ G T
Sbjct: 158 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGXVATRW 207
Query: 154 YLNPD------------DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPS 201
Y P+ D+ S G ++ ELLTG T F +I K R +
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTP 262
Query: 202 GKKRPAMKEVASELA 216
G + +K+++SE A
Sbjct: 263 GAE--LLKKISSESA 275
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 24/125 (19%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D ++ K+ +FG+ A+ + + T GT Y P+
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGTRVYSPPEWIRYHRYH 206
Query: 159 ----DVCSFGVVLVELLTGAKP-------IRFTTFEEDKNITVAKHAKR-CLNPSGKKRP 206
V S G++L +++ G P IR F + +H R CL RP
Sbjct: 207 GRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPSDRP 266
Query: 207 AMKEV 211
+E+
Sbjct: 267 TFEEI 271
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 16/125 (12%)
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGT 151
E + YLH +V +RD+K N++LD K+++FG + D + GT
Sbjct: 116 EIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGT 172
Query: 152 FGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAK--RCL 198
YL P+ D GVV+ E++ G P E+ + + + + R L
Sbjct: 173 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTL 232
Query: 199 NPSGK 203
P K
Sbjct: 233 GPEAK 237
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 15/97 (15%)
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD 158
YLH + + HRD+K N+ L++ K+ +FG + D + GT Y+ P+
Sbjct: 156 YLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKVLCGTPNYIAPE 211
Query: 159 -----------DVCSFGVVLVELLTGAKPIRFTTFEE 184
DV S G ++ LL G P + +E
Sbjct: 212 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE 248
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 70/171 (40%), Gaps = 45/171 (26%)
Query: 36 KGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNK------------------ 77
K ++E ++ E+ I + +H N+VKL+ + ++ N
Sbjct: 46 KSEEELEDYMVEIDILASCDHPNIVKLLDA-----FYYENNLWILIEFCAGGAVDAVMLE 100
Query: 78 -ELPFTWEMQLRISIEAS-GTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR 135
E P T E Q+++ + + ++YLH + I HRD+K+ NIL K+++FG S
Sbjct: 101 LERPLT-ESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSA 156
Query: 136 SRAVDQTHITTQVHGTFGYLNPD----------------DVCSFGVVLVEL 170
GT ++ P+ DV S G+ L+E+
Sbjct: 157 KNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 31/159 (19%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMH-------------DQNKELPFTWEMQLRISI 91
+ EV + +++H N++KL ++ + + K F+ RI
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK 128
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLD--DKYC-AKVSNFGTSRSRAVDQTHITTQV 148
+ ++Y+H I HRD+K NILL+ +K C K+ +FG S Q
Sbjct: 129 QVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGL--STCFQQNTKMKDR 183
Query: 149 HGTFGYLNPD----------DVCSFGVVLVELLTGAKPI 177
GT Y+ P+ DV S GV+L LL+G P
Sbjct: 184 IGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 24/125 (19%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D ++ K+ +FG+ A+ + + T GT Y P+
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGTRVYSPPEWIRYHRYH 207
Query: 159 ----DVCSFGVVLVELLTGAKP-------IRFTTFEEDKNITVAKHAKR-CLNPSGKKRP 206
V S G++L +++ G P IR F + +H R CL RP
Sbjct: 208 GRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPXDRP 267
Query: 207 AMKEV 211
+E+
Sbjct: 268 TFEEI 272
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 16/125 (12%)
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGT 151
E + YLH +V +RD+K N++LD K+++FG + D + GT
Sbjct: 117 EIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGT 173
Query: 152 FGYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAK--RCL 198
YL P+ D GVV+ E++ G P E+ + + + + R L
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTL 233
Query: 199 NPSGK 203
P K
Sbjct: 234 GPEAK 238
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 91/231 (39%), Gaps = 64/231 (27%)
Query: 5 TKLFISNELEKATDSFNVNRILGQGGQDIVYKGMAK------------------------ 40
+ +++ +E E + + + R LGQG +VY+G A+
Sbjct: 5 SSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 64
Query: 41 -VEKFINEVVIQSQINHINVVKLIGCCLETK----------------YMHDQNKEL---- 79
+E F+NE + +VV+L+G + + Y+ E
Sbjct: 65 RIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 123
Query: 80 ---PFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS 136
P T + ++++ E + M+YL+ V HR++ + N ++ + K+ +FG +R
Sbjct: 124 GRPPPTLQEMIQMAAEIADGMAYLNAKKFV---HRNLAARNCMVAHDFTVKIGDFGMTRD 180
Query: 137 -RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLTGAK 175
D + ++ P+ D+ SFGVVL E+ + A+
Sbjct: 181 IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 231
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 31/159 (19%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETKYMH-------------DQNKELPFTWEMQLRISI 91
+ EV + +++H N++KL ++ + + K F+ RI
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK 128
Query: 92 EASGTMSYLHLSASVPIYHRDIKSTNILLD--DKYC-AKVSNFGTSRSRAVDQTHITTQV 148
+ ++Y+H I HRD+K NILL+ +K C K+ +FG S Q
Sbjct: 129 QVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGL--STCFQQNTKMKDR 183
Query: 149 HGTFGYLNPD----------DVCSFGVVLVELLTGAKPI 177
GT Y+ P+ DV S GV+L LL+G P
Sbjct: 184 IGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 15/97 (15%)
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD 158
YLH + + HRD+K N+ L++ K+ +FG + D + GT Y+ P+
Sbjct: 154 YLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKVLCGTPNYIAPE 209
Query: 159 -----------DVCSFGVVLVELLTGAKPIRFTTFEE 184
DV S G ++ LL G P + +E
Sbjct: 210 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE 246
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 32/135 (23%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHG---TFG 153
+ Y+H S I HRD+K +N+ +++ K+ +FG +R H ++ G T
Sbjct: 161 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGYVATRW 210
Query: 154 YLNPD------------DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPS 201
Y P+ D+ S G ++ ELLTG T F +I K R +
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTP 265
Query: 202 GKKRPAMKEVASELA 216
G + +K+++SE A
Sbjct: 266 GAE--LLKKISSESA 278
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEM--------- 85
++ ++ E+V+ +NH N++ L+ K + ++ +++ E+
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEFQDVYLVMELMDANLXQVI 119
Query: 86 QLRISIEASGTMSYLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS---- 136
Q+ + E + Y L S I HRD+K +NI++ K+ +FG +R+
Sbjct: 120 QMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 179
Query: 137 -----RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELL 171
V + + +V GY D+ S G ++ E++
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 91/231 (39%), Gaps = 64/231 (27%)
Query: 5 TKLFISNELEKATDSFNVNRILGQGGQDIVYKGMAK------------------------ 40
+ +++ +E E + + + R LGQG +VY+G A+
Sbjct: 4 SSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 41 -VEKFINEVVIQSQINHINVVKLIGCCLETK----------------YMHDQNKEL---- 79
+E F+NE + +VV+L+G + + Y+ E
Sbjct: 64 RIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 80 ---PFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS 136
P T + ++++ E + M+YL+ V HR++ + N ++ + K+ +FG +R
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFV---HRNLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 137 -RAVDQTHITTQVHGTFGYLNPD-----------DVCSFGVVLVELLTGAK 175
D + ++ P+ D+ SFGVVL E+ + A+
Sbjct: 180 IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD--------- 158
+ HRD+K N+L++++ K+++FG +R++++ +V T Y PD
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEV-VTLWYRPPDILLGSTDYS 179
Query: 159 ---DVCSFGVVLVELLTGAKPIRFTTFEE 184
D+ G + E+ TG +T EE
Sbjct: 180 TQIDMWGVGCIFYEMATGRPLFPGSTVEE 208
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 58/147 (39%), Gaps = 42/147 (28%)
Query: 101 HLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-- 158
HL + + + HRD+K +N+L++ K+ +FG S VD T G Y+ P+
Sbjct: 168 HLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS-GYLVDSVAKTIDA-GCKPYMAPERI 225
Query: 159 -------------DVCSFGVVLVELLTGAKPIRF------TTFEEDKNIT---------- 189
D+ S G+ ++EL +RF T F++ K +
Sbjct: 226 NPELNQKGYSVKSDIWSLGITMIELAI----LRFPYDSWGTPFQQLKQVVEEPSPQLPAD 281
Query: 190 -----VAKHAKRCLNPSGKKRPAMKEV 211
+CL + K+RP E+
Sbjct: 282 KFSAEFVDFTSQCLKKNSKERPTYPEL 308
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 26/132 (19%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLN 156
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T T Y
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXV----ATRWYRA 190
Query: 157 PD------------DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKK 204
P+ D+ S G ++ ELLTG T F +I K R + G +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 205 RPAMKEVASELA 216
+K+++SE A
Sbjct: 246 --LLKKISSESA 255
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEM--------- 85
++ ++ E+V+ +NH N++ L+ K + ++ +++ E+
Sbjct: 54 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEFQDVYLVMELMDANLXQVI 112
Query: 86 QLRISIEASGTMSYLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS---- 136
Q+ + E + Y L S I HRD+K +NI++ K+ +FG +R+
Sbjct: 113 QMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 172
Query: 137 -----RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELL 171
V + + +V GY D+ S G ++ E++
Sbjct: 173 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ ++G +R + T ++ T+ +
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 247
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 248 KKISSESA 255
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 32/135 (23%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHG---TFG 153
+ Y+H S I HRD+K +N+ +++ K+ +FG +R H ++ G T
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRW 187
Query: 154 YLNPD------------DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPS 201
Y P+ D+ S G ++ ELLTG T F +I K R +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTP 242
Query: 202 GKKRPAMKEVASELA 216
G + +K+++SE A
Sbjct: 243 GAE--LLKKISSESA 255
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 32/135 (23%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHG---TFG 153
+ Y+H S I HRD+K +N+ +++ K+ +FG +R H ++ G T
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRW 187
Query: 154 YLNPD------------DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPS 201
Y P+ D+ S G ++ ELLTG T F +I K R +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTP 242
Query: 202 GKKRPAMKEVASELA 216
G + +K+++SE A
Sbjct: 243 GAE--LLKKISSESA 255
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 49/102 (48%), Gaps = 18/102 (17%)
Query: 87 LRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITT 146
+ S + + M+Y+ + HRD+++ N+L+ + K+++FG +R ++ T
Sbjct: 112 IDFSAQIAEGMAYIERKNYI---HRDLRAANVLVSESLMCKIADFGL--ARVIEDNEYTA 166
Query: 147 QVHGTF--GYLNPD-----------DVCSFGVVLVELLTGAK 175
+ F + P+ +V SFG++L E++T K
Sbjct: 167 REGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGK 208
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 15/97 (15%)
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD 158
YLH + + HRD+K N+ L++ K+ +FG + D + GT Y+ P+
Sbjct: 130 YLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKVLCGTPNYIAPE 185
Query: 159 -----------DVCSFGVVLVELLTGAKPIRFTTFEE 184
DV S G ++ LL G P + +E
Sbjct: 186 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE 222
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 18/101 (17%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDK---YCAKVSNFGTSRSRAVDQTHITTQVHGTFG 153
++YLH I HRD+K N+LL+ K K+ +FG S + +Q + ++ GT
Sbjct: 149 VTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLS-AVFENQKKMKERL-GTAY 203
Query: 154 YLNPD----------DVCSFGVVLVELLTGAKPIRFTTFEE 184
Y+ P+ DV S GV+L LL G P T +E
Sbjct: 204 YIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE 244
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 21/148 (14%)
Query: 47 EVVIQSQINHINVVKLIGC---CLETKYMHDQNKELPFTWE-----MQLRISIEASGTMS 98
E+++ + H NV+ L+ + +D +PF M L+ S E +
Sbjct: 73 ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLV 132
Query: 99 YLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQ----- 147
Y L S + HRD+K N+ +++ K+ +FG +R + T ++ T+
Sbjct: 133 YQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAP 192
Query: 148 --VHGTFGYLNPDDVCSFGVVLVELLTG 173
+ Y D+ S G ++ E+LTG
Sbjct: 193 EVILSWMHYNQTVDIWSVGCIMAEMLTG 220
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 18/96 (18%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTS----RSRAVDQTHITTQVHGTF 152
+S+LH + HRDIK N+LL + K+ +FG S R+ T I T
Sbjct: 142 LSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAP 198
Query: 153 GYL----NPD-------DVCSFGVVLVELLTGAKPI 177
+ NPD D+ S G+ +E+ GA P+
Sbjct: 199 EVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 15/93 (16%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKY---CAKVSNFGTSRSRAVDQT---------HI 144
+ YLH S+ I HRD+K N+L K K+++FG ++ + ++
Sbjct: 136 IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 192
Query: 145 TTQVHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+V G Y D+ S GV++ LL G P
Sbjct: 193 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 225
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 15/93 (16%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKY---CAKVSNFGTSRSRAVDQT---------HI 144
+ YLH S+ I HRD+K N+L K K+++FG ++ + ++
Sbjct: 144 IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 200
Query: 145 TTQVHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+V G Y D+ S GV++ LL G P
Sbjct: 201 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 233
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 15/93 (16%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKY---CAKVSNFGTSRSRAVDQT---------HI 144
+ YLH S+ I HRD+K N+L K K+++FG ++ + ++
Sbjct: 135 IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 191
Query: 145 TTQVHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+V G Y D+ S GV++ LL G P
Sbjct: 192 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 224
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 32/135 (23%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHG---TFG 153
+ Y+H S I HRD+K +N+ +++ K+ +FG +R H ++ G T
Sbjct: 134 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRW 183
Query: 154 YLNPD------------DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPS 201
Y P+ D+ S G ++ ELLTG T F +I K R +
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTP 238
Query: 202 GKKRPAMKEVASELA 216
G + +K+++SE A
Sbjct: 239 GAE--LLKKISSESA 251
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 15/93 (16%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKY---CAKVSNFGTSRSRAVDQT---------HI 144
+ YLH S+ I HRD+K N+L K K+++FG ++ + ++
Sbjct: 174 IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 230
Query: 145 TTQVHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+V G Y D+ S GV++ LL G P
Sbjct: 231 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 15/93 (16%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKY---CAKVSNFGTSRSRAVDQT---------HI 144
+ YLH S+ I HRD+K N+L K K+++FG ++ + ++
Sbjct: 134 IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 190
Query: 145 TTQVHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+V G Y D+ S GV++ LL G P
Sbjct: 191 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 223
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 34/130 (26%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D ++ K+ +FG+ A+ + + T GT Y P+
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGTRVYSPPEWIRYHRYH 187
Query: 159 ----DVCSFGVVLVELLTGAKPIRFTTFEEDKNI------------TVAKHAKR-CLNPS 201
V S G++L +++ G P FE D+ I + +H R CL
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIGGQVFFRQRVSSECQHLIRWCLALR 242
Query: 202 GKKRPAMKEV 211
RP +E+
Sbjct: 243 PSDRPTFEEI 252
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 26/163 (15%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEMQ-----LRI 89
++ ++ E+V+ +NH N++ L+ K + ++ +++ E+ I
Sbjct: 61 FQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTL-EEFQDVYLVMELMDANLCQVI 119
Query: 90 SIEASGT-MSYL---------HLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS--- 136
+E MSYL HL S I HRD+K +NI++ K+ +FG +R+
Sbjct: 120 HMELDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACT 178
Query: 137 ------RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELLTG 173
V + + +V GY D+ S G ++ EL+ G
Sbjct: 179 NFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 34/130 (26%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D ++ K+ +FG S A+ + + T GT Y P+
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 159 ----DVCSFGVVLVELLTGAKPIRFTTFEEDKNI------------TVAKHAKR-CLNPS 201
V S G++L +++ G P FE D+ I + +H R CL
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIGGQVFFRQRVSSECQHLIRWCLALR 275
Query: 202 GKKRPAMKEV 211
RP +E+
Sbjct: 276 PSDRPTFEEI 285
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 15/93 (16%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKY---CAKVSNFGTSRSRAVDQT---------HI 144
+ YLH S+ I HRD+K N+L K K+++FG ++ + ++
Sbjct: 180 IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 236
Query: 145 TTQVHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+V G Y D+ S GV++ LL G P
Sbjct: 237 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 269
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 15/93 (16%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKY---CAKVSNFGTSRSRAVDQT---------HI 144
+ YLH S+ I HRD+K N+L K K+++FG ++ + ++
Sbjct: 129 IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 185
Query: 145 TTQVHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+V G Y D+ S GV++ LL G P
Sbjct: 186 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 218
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 15/93 (16%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKY---CAKVSNFGTSRSRAVDQT---------HI 144
+ YLH S+ I HRD+K N+L K K+++FG ++ + ++
Sbjct: 128 IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 184
Query: 145 TTQVHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+V G Y D+ S GV++ LL G P
Sbjct: 185 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 15/93 (16%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKY---CAKVSNFGTSRSRAVDQT---------HI 144
+ YLH S+ I HRD+K N+L K K+++FG ++ + ++
Sbjct: 130 IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 186
Query: 145 TTQVHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+V G Y D+ S GV++ LL G P
Sbjct: 187 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 34/130 (26%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D ++ K+ +FG S A+ + + T GT Y P+
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 159 ----DVCSFGVVLVELLTGAKPIRFTTFEEDKNI------------TVAKHAKR-CLNPS 201
V S G++L +++ G P FE D+ I + +H R CL
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIGGQVFFRQRVSSECQHLIRWCLALR 275
Query: 202 GKKRPAMKEV 211
RP +E+
Sbjct: 276 PSDRPTFEEI 285
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 64/160 (40%), Gaps = 36/160 (22%)
Query: 4 KTKLFISNELEKATDSFNVNRILGQGGQDIVYKG---------MAKVEK--------FIN 46
+T +F+ E + + + ++G+G VY G + +E+ F
Sbjct: 20 QTSIFL-QEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKR 78
Query: 47 EVVIQSQINHINVVKLIGCCL--------------ETKYMHDQNKELPFTWEMQLRISIE 92
EV+ Q H NVV +G C+ T Y ++ ++ +I+ E
Sbjct: 79 EVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQE 138
Query: 93 ASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFG 132
M YLH I H+D+KS N+ D+ +++FG
Sbjct: 139 IVKGMGYLHAKG---ILHKDLKSKNVFYDNGKVV-ITDFG 174
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 18/96 (18%)
Query: 95 GTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGY 154
+ SY+H ++ HRD+K +NIL+D K+S+FG S VD+ GT+ +
Sbjct: 162 NSFSYIHNEKNIC--HRDVKPSNILMDKNGRVKLSDFGESE-YMVDKK--IKGSRGTYEF 216
Query: 155 LNPD-------------DVCSFGVVLVELLTGAKPI 177
+ P+ D+ S G+ L + P
Sbjct: 217 MPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPF 252
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 15/93 (16%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKY---CAKVSNFGTSRSRAVDQT---------HI 144
+ YLH S+ I HRD+K N+L K K+++FG ++ + ++
Sbjct: 128 IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYV 184
Query: 145 TTQVHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+V G Y D+ S GV++ LL G P
Sbjct: 185 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 34/130 (26%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D ++ K+ +FG S A+ + + T GT Y P+
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 159 ----DVCSFGVVLVELLTGAKPIRFTTFEEDKNI------------TVAKHAKR-CLNPS 201
V S G++L +++ G P FE D+ I + +H R CL
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIGGQVFFRQRVSSECQHLIRWCLALR 274
Query: 202 GKKRPAMKEV 211
RP +E+
Sbjct: 275 PSDRPTFEEI 284
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 15/93 (16%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKY---CAKVSNFGTSRSRAVDQT---------HI 144
+ YLH S+ I HRD+K N+L K K+++FG ++ + ++
Sbjct: 130 IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 186
Query: 145 TTQVHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+V G Y D+ S GV++ LL G P
Sbjct: 187 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 34/130 (26%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D ++ K+ +FG S A+ + + T GT Y P+
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 159 ----DVCSFGVVLVELLTGAKPIRFTTFEEDKNI------------TVAKHAKR-CLNPS 201
V S G++L +++ G P FE D+ I + +H R CL
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIGGQVFFRQRVSSECQHLIRWCLALR 274
Query: 202 GKKRPAMKEV 211
RP +E+
Sbjct: 275 PSDRPTFEEI 284
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 19/94 (20%)
Query: 108 IYHRDIKSTNILLDDK---YCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD------ 158
I HRD+K N+LL K K+++FG + +Q GT GYL+P+
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQ-QAWFGFAGTPGYLSPEVLRKDP 209
Query: 159 -----DVCSFGVVLVELLTGAKPIRFTTFEEDKN 187
D+ + GV+L LL G P ++ED++
Sbjct: 210 YGKPVDIWACGVILYILLVGYPPF----WDEDQH 239
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 20/101 (19%)
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYC----AKVSNFGTSRSRAVDQTHITTQVHGTFGY 154
YLH S+ I H D+K NI+L D+ K+ +FG + +D + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNIFGTPAF 183
Query: 155 LNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEE 184
+ P+ D+ S GV+ LL+GA P T +E
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 35.4 bits (80), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 13/82 (15%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD--------- 158
+ HRD+K N+L++ K++NFG +R+ + + +V T Y PD
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEV-VTLWYRPPDVLFGAKLYS 180
Query: 159 ---DVCSFGVVLVELLTGAKPI 177
D+ S G + EL +P+
Sbjct: 181 TSIDMWSAGCIFAELANAGRPL 202
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 35.4 bits (80), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 13/82 (15%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD--------- 158
+ HRD+K N+L++ K+++FG +R+ + + +V T Y PD
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEV-VTLWYRPPDVLFGAKLYS 180
Query: 159 ---DVCSFGVVLVELLTGAKPI 177
D+ S G + EL A+P+
Sbjct: 181 TSIDMWSAGCIFAELANAARPL 202
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEM--------- 85
++ ++ E+V+ +NH N++ L+ K + ++ +++ E+
Sbjct: 55 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEFQDVYLVMELMDANLCQVI 113
Query: 86 QLRISIEASGTMSYLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS---- 136
Q+ + E + Y L S I HRD+K +NI++ K+ +FG +R+
Sbjct: 114 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 173
Query: 137 -----RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELL 171
V + + +V GY D+ S G ++ E++
Sbjct: 174 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 19/94 (20%)
Query: 108 IYHRDIKSTNILLDDKY---CAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD------ 158
+ HRD+K N+LL K K+++FG + +Q GT GYL+P+
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAGTPGYLSPEVLRKDP 200
Query: 159 -----DVCSFGVVLVELLTGAKPIRFTTFEEDKN 187
D+ + GV+L LL G P ++ED++
Sbjct: 201 YGKPVDLWACGVILYILLVGYPPF----WDEDQH 230
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEM--------- 85
++ ++ E+V+ +NH N++ L+ K + ++ +++ E+
Sbjct: 62 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEFQDVYLVMELMDANLCQVI 120
Query: 86 QLRISIEASGTMSYLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS---- 136
Q+ + E + Y L S I HRD+K +NI++ K+ +FG +R+
Sbjct: 121 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 180
Query: 137 -----RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELL 171
V + + +V GY D+ S G ++ E++
Sbjct: 181 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEM--------- 85
++ ++ E+V+ +NH N++ L+ K + ++ +++ E+
Sbjct: 54 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEFQDVYLVMELMDANLCQVI 112
Query: 86 QLRISIEASGTMSYLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS---- 136
Q+ + E + Y L S I HRD+K +NI++ K+ +FG +R+
Sbjct: 113 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 172
Query: 137 -----RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELL 171
V + + +V GY D+ S G ++ E++
Sbjct: 173 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 11/85 (12%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 167 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 223
Query: 152 ---FGYLNPDDVCSFGVVLVELLTG 173
Y D+ S G ++ ELLTG
Sbjct: 224 LNWMHYNMTVDIWSVGCIMAELLTG 248
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEM--------- 85
++ ++ E+V+ +NH N++ L+ K + ++ +++ E+
Sbjct: 62 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEFQDVYLVMELMDANLCQVI 120
Query: 86 QLRISIEASGTMSYLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS---- 136
Q+ + E + Y L S I HRD+K +NI++ K+ +FG +R+
Sbjct: 121 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 180
Query: 137 -----RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELL 171
V + + +V GY D+ S G ++ E++
Sbjct: 181 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEM--------- 85
++ ++ E+V+ +NH N++ L+ K + ++ +++ E+
Sbjct: 60 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEFQDVYLVMELMDANLCQVI 118
Query: 86 QLRISIEASGTMSYLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS---- 136
Q+ + E + Y L S I HRD+K +NI++ K+ +FG +R+
Sbjct: 119 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 178
Query: 137 -----RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELL 171
V + + +V GY D+ S G ++ E++
Sbjct: 179 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 35.0 bits (79), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEM--------- 85
++ ++ E+V+ +NH N++ L+ K + ++ +++ E+
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEFQDVYLVMELMDANLCQVI 119
Query: 86 QLRISIEASGTMSYLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS---- 136
Q+ + E + Y L S I HRD+K +NI++ K+ +FG +R+
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 137 -----RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELL 171
V + + +V GY D+ S G ++ E++
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 35.0 bits (79), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 33/168 (19%)
Query: 44 FINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEMQLRI-------SIEASGT 96
++EV + Q++H N++KL E K + E+ E+ I ++A+
Sbjct: 68 LLDEVAVLKQLDHPNIMKLYEF-FEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVI 126
Query: 97 M-------SYLHLSASVPIYHRDIKSTNILLDDK---YCAKVSNFGTSRSRAVDQTHITT 146
M +YLH I HRD+K N+LL+ K K+ +FG S V
Sbjct: 127 MKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK--MK 181
Query: 147 QVHGTFGYLNPD----------DVCSFGVVLVELLTGAKPIRFTTFEE 184
+ GT Y+ P+ DV S GV+L LL G P T +E
Sbjct: 182 ERLGTAYYIAPEVLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQE 229
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 35.0 bits (79), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEM--------- 85
++ ++ E+V+ +NH N++ L+ K + ++ +++ E+
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEFQDVYLVMELMDANLCQVI 119
Query: 86 QLRISIEASGTMSYLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS---- 136
Q+ + E + Y L S I HRD+K +NI++ K+ +FG +R+
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 137 -----RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELL 171
V + + +V GY D+ S G ++ E++
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 35.0 bits (79), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEM--------- 85
++ ++ E+V+ +NH N++ L+ K + ++ +++ E+
Sbjct: 55 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEFQDVYLVMELMDANLCQVI 113
Query: 86 QLRISIEASGTMSYLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS---- 136
Q+ + E + Y L S I HRD+K +NI++ K+ +FG +R+
Sbjct: 114 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 173
Query: 137 -----RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELL 171
V + + +V GY D+ S G ++ E++
Sbjct: 174 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 35.0 bits (79), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEM--------- 85
++ ++ E+V+ +NH N++ L+ K + ++ +++ E+
Sbjct: 99 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEFQDVYLVMELMDANLCQVI 157
Query: 86 QLRISIEASGTMSYLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS---- 136
Q+ + E + Y L S I HRD+K +NI++ K+ +FG +R+
Sbjct: 158 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 217
Query: 137 -----RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELL 171
V + + +V GY D+ S G ++ E++
Sbjct: 218 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 35.0 bits (79), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 18/91 (19%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR---SRAVDQTHITTQVHGTFG 153
+ Y+H S + HRD+K +N+L+++ K+ +FG +R + + + T+ T
Sbjct: 172 LKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 228
Query: 154 YLNPD------------DVCSFGVVLVELLT 172
Y P+ D+ S G + E+L
Sbjct: 229 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 35.0 bits (79), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEM--------- 85
++ ++ E+V+ +NH N++ L+ K + ++ +++ E+
Sbjct: 99 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEFQDVYLVMELMDANLCQVI 157
Query: 86 QLRISIEASGTMSYLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS---- 136
Q+ + E + Y L S I HRD+K +NI++ K+ +FG +R+
Sbjct: 158 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 217
Query: 137 -----RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELL 171
V + + +V GY D+ S G ++ E++
Sbjct: 218 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 35.0 bits (79), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 18/86 (20%)
Query: 110 HRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD----------- 158
HRDIK NILLD ++++FG+ D T + GT YL+P+
Sbjct: 185 HRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGT 244
Query: 159 -------DVCSFGVVLVELLTGAKPI 177
D + GV E+ G P
Sbjct: 245 GSYGPECDWWALGVFAYEMFYGQTPF 270
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 35.0 bits (79), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 41/175 (23%)
Query: 40 KVEKFINEVVIQSQINHINVVKLI----------------GCCLETKYMHDQNKEL--PF 81
K+ K E+ I S++ H N++K++ G L+ D++ L P
Sbjct: 72 KLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPL 131
Query: 82 TWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQ 141
R + A G YL L I HRDIK NI++ + + K+ +FG++ +++
Sbjct: 132 A-SYIFRQLVSAVG---YLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAY--LER 182
Query: 142 THITTQVHGTFGYLNPD------------DVCSFGVVLVELLTGAKPIRFTTFEE 184
+ GT Y P+ ++ S GV L L+ P F EE
Sbjct: 183 GKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENP--FCELEE 235
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 35.0 bits (79), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 34/130 (26%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D ++ K+ +FG S A+ + + T GT Y P+
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 159 ----DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVA------------KHAKR-CLNPS 201
V S G++L +++ G P FE D+ I +H R CL
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIGGQVFFRQRVSXECQHLIRWCLALR 274
Query: 202 GKKRPAMKEV 211
RP +E+
Sbjct: 275 PSDRPTFEEI 284
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEM--------- 85
++ ++ E+V+ +NH N++ L+ K + ++ +++ E+
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL-EEFQDVYIVMELMDANLCQVI 119
Query: 86 QLRISIEASGTMSYLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS---- 136
Q+ + E + Y L S I HRD+K +NI++ K+ +FG +R+
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 137 -----RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELL 171
V + + +V GY D+ S G ++ E++
Sbjct: 180 FMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 35.0 bits (79), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 34/130 (26%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D ++ K+ +FG S A+ + + T GT Y P+
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 159 ----DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVA------------KHAKR-CLNPS 201
V S G++L +++ G P FE D+ I +H R CL
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIGGQVFFRQRVSXECQHLIRWCLALR 275
Query: 202 GKKRPAMKEV 211
RP +E+
Sbjct: 276 PSDRPTFEEI 285
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 35.0 bits (79), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 34/130 (26%)
Query: 108 IYHRDIKSTNILLD-DKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD-------- 158
+ HRDIK NIL+D ++ K+ +FG S A+ + + T GT Y P+
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 159 ----DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVA------------KHAKR-CLNPS 201
V S G++L +++ G P FE D+ I +H R CL
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIGGQVFFRQRVSXECQHLIRWCLALR 275
Query: 202 GKKRPAMKEV 211
RP +E+
Sbjct: 276 PSDRPTFEEI 285
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQ-------V 148
+ Y+H S + HRD+K N+ +++ K+ +FG +R + T ++ T+ +
Sbjct: 157 LKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVI 213
Query: 149 HGTFGYLNPDDVCSFGVVLVELLTG 173
Y D+ S G ++ E+LTG
Sbjct: 214 LSWMHYNQTVDIWSVGCIMAEMLTG 238
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 16/108 (14%)
Query: 82 TWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQ 141
T+E L + + + M +L + V HRD+ + N+L+ K+ +FG +R D
Sbjct: 170 TFEDLLCFAYQVAKGMEFLEFKSCV---HRDLAARNVLVTHGKVVKICDFGLARDIMSDS 226
Query: 142 THITT-QVHGTFGYLNPD-----------DVCSFGVVLVELLT-GAKP 176
++ ++ P+ DV S+G++L E+ + G P
Sbjct: 227 NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 274
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 18/119 (15%)
Query: 34 VYKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEM---QLRIS 90
V++ + ++ + E+ I +++NH +VVK++ + ++ EL E+ +
Sbjct: 89 VFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDV--EKFDELYVVLEIADSDFKKL 146
Query: 91 IEASGTMSYLHLSA-------------SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS 136
++ LH+ S I HRD+K N L++ KV +FG +R+
Sbjct: 147 FRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLART 205
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 34.7 bits (78), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 19/97 (19%)
Query: 96 TMSYLHLSASVPIYHRDIKSTNILLDDKY----CAKVSNFGTSRSRAVDQTHITTQVHGT 151
T+ YLH V HRD+K +NIL D+ ++ +FG ++ + + T + T
Sbjct: 128 TVEYLHAQGVV---HRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY-T 183
Query: 152 FGYLNPD-----------DVCSFGVVLVELLTGAKPI 177
++ P+ D+ S GV+L LTG P
Sbjct: 184 ANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 34.7 bits (78), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 35/124 (28%)
Query: 82 TWEMQLRISIEASGTMSYLHLSASVP----------IYHRDIKSTNILLDDKYCAKVSNF 131
TW ++ S +SYLH VP I HRD KS N+LL A +++F
Sbjct: 110 TWNELCHVAETMSRGLSYLH--EDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADF 167
Query: 132 GTS----RSRAVDQTHITTQVHGTFGYLNPD----------------DVCSFGVVLVELL 171
G + + TH QV GT Y+ P+ D+ + G+VL EL+
Sbjct: 168 GLAVRFEPGKPPGDTH--GQV-GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELV 224
Query: 172 TGAK 175
+ K
Sbjct: 225 SRCK 228
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 34.7 bits (78), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 64/158 (40%), Gaps = 34/158 (21%)
Query: 45 INEVVIQSQIN---HINVVKLIGCCLETKYMHDQNKELPFTW-EMQLRISIEASGT---- 96
+ EV + ++ H NVV+L+ C ++ + L F + LR ++ +
Sbjct: 51 VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLP 110
Query: 97 --------------MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR----SRA 138
+ +LH + I HRD+K NIL+ K+++FG +R A
Sbjct: 111 AETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA 167
Query: 139 VDQTHIT-----TQVHGTFGYLNPDDVCSFGVVLVELL 171
+D +T +V Y P D+ S G + E+
Sbjct: 168 LDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 34.7 bits (78), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ ++ +FG +R + T ++ T+ +
Sbjct: 144 LKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIM 200
Query: 152 ---FGYLNPDDVCSFGVVLVELLTG 173
Y D+ S G ++ ELL G
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQG 225
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 34.7 bits (78), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 33/159 (20%)
Query: 46 NEVVIQSQINHINVVKLIGCCLETKYMH------------DQNKELPFTWEMQLRISI-E 92
NE+ + +I H N+V L T + + D+ E E + I +
Sbjct: 55 NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ 114
Query: 93 ASGTMSYLHLSASVPIYHRDIKSTNILL---DDKYCAKVSNFGTSRSRAVDQTHITTQVH 149
+ YLH + I HRD+K N+L ++ +++FG S+ ++Q I +
Sbjct: 115 VLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSK---MEQNGIMSTAC 168
Query: 150 GTFGYLNPD-----------DVCSFGVVLVELLTGAKPI 177
GT GY+ P+ D S GV+ LL G P
Sbjct: 169 GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 34.7 bits (78), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ ++ +FG +R + T ++ T+ +
Sbjct: 144 LKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIM 200
Query: 152 ---FGYLNPDDVCSFGVVLVELLTG 173
Y D+ S G ++ ELL G
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQG 225
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 34.7 bits (78), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 20/101 (19%)
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYC----AKVSNFGTSRSRAVDQTHITTQVHGTFGY 154
YLH S+ I H D+K NI+L D+ K+ +FG + +D + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNIFGTPEF 183
Query: 155 LNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEE 184
+ P+ D+ S GV+ LL+GA P T +E
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 34.7 bits (78), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 18/91 (19%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR---SRAVDQTHITTQVHGTFG 153
+ Y+H S + HRD+K +N+L+++ K+ +FG +R + + + T+ T
Sbjct: 171 LKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 227
Query: 154 YLNPD------------DVCSFGVVLVELLT 172
Y P+ D+ S G + E+L
Sbjct: 228 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 34.7 bits (78), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 94 SGTMSYLHLSASVPIYHRDIKSTNILLDDK---YCAKVSNFGTSRSRAVDQTHITTQVHG 150
SGT +YLH I HRD+K N+LL+ K K+ +FG S V + G
Sbjct: 115 SGT-TYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK--MKERLG 168
Query: 151 TFGYLNPD----------DVCSFGVVLVELLTGAKPIRFTTFEE 184
T Y+ P+ DV S GV+L LL G P T +E
Sbjct: 169 TAYYIAPEVLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQE 212
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 20/101 (19%)
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYC----AKVSNFGTSRSRAVDQTHITTQVHGTFGY 154
YLH S+ I H D+K NI+L D+ K+ +FG + +D + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNIFGTPEF 183
Query: 155 LNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEE 184
+ P+ D+ S GV+ LL+GA P T +E
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 20/94 (21%)
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYC----AKVSNFGTSRSRAVDQTHITTQVHGTFGY 154
YLH S+ I H D+K NI+L D+ K+ +FG + +D + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNIFGTPEF 183
Query: 155 LNPD-----------DVCSFGVVLVELLTGAKPI 177
+ P+ D+ S GV+ LL+GA P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 20/94 (21%)
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYC----AKVSNFGTSRSRAVDQTHITTQVHGTFGY 154
YLH S+ I H D+K NI+L D+ K+ +FG + +D + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNIFGTPEF 183
Query: 155 LNPD-----------DVCSFGVVLVELLTGAKPI 177
+ P+ D+ S GV+ LL+GA P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 34.3 bits (77), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 11/76 (14%)
Query: 110 HRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVH-----------GTFGYLNPD 158
HRD+K NIL+ K+ +FG +R + +V G Y P
Sbjct: 125 HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPV 184
Query: 159 DVCSFGVVLVELLTGA 174
DV + G V ELL+G
Sbjct: 185 DVWAIGCVFAELLSGV 200
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 34.3 bits (77), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 20/94 (21%)
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAK----VSNFGTSRSRAVDQTHITTQVHGTFGY 154
YLH S+ I H D+K NI+L D+ K + +FG + +D + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNIFGTPEF 183
Query: 155 LNPD-----------DVCSFGVVLVELLTGAKPI 177
+ P+ D+ S GV+ LL+GA P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 34.3 bits (77), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 62/169 (36%), Gaps = 43/169 (25%)
Query: 8 FISNELEKATDSFNVNRILGQGGQDIVYKGM------------------AKVEKFINEVV 49
F+ +E V R+L +GG VY+ K I EV
Sbjct: 18 FVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVC 77
Query: 50 IQSQIN-HINVVKLIGCC---------------LETKYMHDQNKEL--------PFTWEM 85
+++ H N+V+ L T+ Q E P + +
Sbjct: 78 FMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDT 137
Query: 86 QLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTS 134
L+I + + ++H PI HRD+K N+LL ++ K+ +FG++
Sbjct: 138 VLKIFYQTCRAVQHMHRQKP-PIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 34.3 bits (77), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 20/94 (21%)
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAK----VSNFGTSRSRAVDQTHITTQVHGTFGY 154
YLH S+ I H D+K NI+L D+ K + +FG + +D + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNIFGTPEF 183
Query: 155 LNPD-----------DVCSFGVVLVELLTGAKPI 177
+ P+ D+ S GV+ LL+GA P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 34.3 bits (77), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 20/94 (21%)
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAK----VSNFGTSRSRAVDQTHITTQVHGTFGY 154
YLH S+ I H D+K NI+L D+ K + +FG + +D + + GT +
Sbjct: 128 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNIFGTPEF 182
Query: 155 LNPD-----------DVCSFGVVLVELLTGAKPI 177
+ P+ D+ S GV+ LL+GA P
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 34.3 bits (77), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 20/94 (21%)
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAK----VSNFGTSRSRAVDQTHITTQVHGTFGY 154
YLH S+ I H D+K NI+L D+ K + +FG + +D + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNIFGTPEF 183
Query: 155 LNPD-----------DVCSFGVVLVELLTGAKPI 177
+ P+ D+ S GV+ LL+GA P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 34.3 bits (77), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 20/94 (21%)
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAK----VSNFGTSRSRAVDQTHITTQVHGTFGY 154
YLH S+ I H D+K NI+L D+ K + +FG + +D + + GT +
Sbjct: 128 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNIFGTPEF 182
Query: 155 LNPD-----------DVCSFGVVLVELLTGAKPI 177
+ P+ D+ S GV+ LL+GA P
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 34.3 bits (77), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 20/94 (21%)
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYCAK----VSNFGTSRSRAVDQTHITTQVHGTFGY 154
YLH S+ I H D+K NI+L D+ K + +FG + +D + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNIFGTPEF 183
Query: 155 LNPD-----------DVCSFGVVLVELLTGAKPI 177
+ P+ D+ S GV+ LL+GA P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 34.3 bits (77), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ ++ +FG +R + T ++ T+ +
Sbjct: 136 LKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPEIM 192
Query: 152 ---FGYLNPDDVCSFGVVLVELLTG 173
Y D+ S G ++ ELL G
Sbjct: 193 LNWMHYNQTVDIWSVGCIMAELLQG 217
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 34.3 bits (77), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEM--------- 85
++ ++ E+V+ +NH N++ L+ K + ++ +++ E+
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL-EEFQDVYIVMELMDANLCQVI 119
Query: 86 QLRISIEASGTMSYLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS---- 136
Q+ + E + Y L S I HRD+K +NI++ K+ +FG +R+
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 137 -----RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELL 171
V + + +V GY D+ S G ++ E++
Sbjct: 180 FMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 219
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 34.3 bits (77), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 20/94 (21%)
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYC----AKVSNFGTSRSRAVDQTHITTQVHGTFGY 154
YLH S+ I H D+K NI+L D+ K+ +FG + +D + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNIFGTPEF 183
Query: 155 LNPD-----------DVCSFGVVLVELLTGAKPI 177
+ P+ D+ S GV+ LL+GA P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 34.3 bits (77), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 20/94 (21%)
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYC----AKVSNFGTSRSRAVDQTHITTQVHGTFGY 154
YLH S+ I H D+K NI+L D+ K+ +FG + +D + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNIFGTPEF 183
Query: 155 LNPD-----------DVCSFGVVLVELLTGAKPI 177
+ P+ D+ S GV+ LL+GA P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 34.3 bits (77), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 20/94 (21%)
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYC----AKVSNFGTSRSRAVDQTHITTQVHGTFGY 154
YLH S+ I H D+K NI+L D+ K+ +FG + +D + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNIFGTPEF 183
Query: 155 LNPD-----------DVCSFGVVLVELLTGAKPI 177
+ P+ D+ S GV+ LL+GA P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 34.3 bits (77), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 14/81 (17%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD--------- 158
I HRD+K N+LLD+ K+++FG S + D + T G+ Y P+
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSC-GSPNYAAPEVISGKLYAG 191
Query: 159 ---DVCSFGVVLVELLTGAKP 176
DV S GV+L +L P
Sbjct: 192 PEVDVWSCGVILYVMLCRRLP 212
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 34.3 bits (77), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 14/81 (17%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD--------- 158
I HRD+K N+LLD+ K+++FG S + D + T G+ Y P+
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSC-GSPNYAAPEVISGKLYAG 181
Query: 159 ---DVCSFGVVLVELLTGAKP 176
DV S GV+L +L P
Sbjct: 182 PEVDVWSCGVILYVMLCRRLP 202
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 34.3 bits (77), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 72/171 (42%), Gaps = 46/171 (26%)
Query: 36 KGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNK------------------ 77
K ++E ++ E+ I + +H N+VKL+ + ++ N
Sbjct: 73 KSEEELEDYMVEIDILASCDHPNIVKLLDA-----FYYENNLWILIEFCAGGAVDAVMLE 127
Query: 78 -ELPFTWEMQLRISIEAS-GTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR 135
E P T E Q+++ + + ++YLH + I HRD+K+ NIL K+++FG S
Sbjct: 128 LERPLT-ESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVS- 182
Query: 136 SRAVDQTHITTQVHGTFGYLNPD----------------DVCSFGVVLVEL 170
++ GT ++ P+ DV S G+ L+E+
Sbjct: 183 AKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 33.9 bits (76), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 14/81 (17%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD--------- 158
I HRD+K N+LLD+ K+++FG S + D + T G+ Y P+
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSC-GSPNYAAPEVISGKLYAG 190
Query: 159 ---DVCSFGVVLVELLTGAKP 176
DV S GV+L +L P
Sbjct: 191 PEVDVWSCGVILYVMLCRRLP 211
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 33.9 bits (76), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 72/171 (42%), Gaps = 46/171 (26%)
Query: 36 KGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNK------------------ 77
K ++E ++ E+ I + +H N+VKL+ + ++ N
Sbjct: 73 KSEEELEDYMVEIDILASCDHPNIVKLLDA-----FYYENNLWILIEFCAGGAVDAVMLE 127
Query: 78 -ELPFTWEMQLRISIEAS-GTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR 135
E P T E Q+++ + + ++YLH + I HRD+K+ NIL K+++FG S
Sbjct: 128 LERPLT-ESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVS- 182
Query: 136 SRAVDQTHITTQVHGTFGYLNPD----------------DVCSFGVVLVEL 170
++ GT ++ P+ DV S G+ L+E+
Sbjct: 183 AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 33.9 bits (76), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 14/81 (17%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD--------- 158
I HRD+K N+LLD+ K+++FG S + D + T G+ Y P+
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSC-GSPNYAAPEVISGKLYAG 185
Query: 159 ---DVCSFGVVLVELLTGAKP 176
DV S GV+L +L P
Sbjct: 186 PEVDVWSCGVILYVMLCRRLP 206
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 33.9 bits (76), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEM--------- 85
++ ++ E+V+ +NH N++ L+ K + ++ +++ E+
Sbjct: 66 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL-EEFQDVYIVMELMDANLCQVI 124
Query: 86 QLRISIEASGTMSYLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS---- 136
Q+ + E + Y L S I HRD+K +NI++ K+ +FG +R+
Sbjct: 125 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 184
Query: 137 -----RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELL 171
V + + +V GY D+ S G ++ E++
Sbjct: 185 FMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 224
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 72/171 (42%), Gaps = 46/171 (26%)
Query: 36 KGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNK------------------ 77
K ++E ++ E+ I + +H N+VKL+ + ++ N
Sbjct: 73 KSEEELEDYMVEIDILASCDHPNIVKLLDA-----FYYENNLWILIEFCAGGAVDAVMLE 127
Query: 78 -ELPFTWEMQLRISIEAS-GTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR 135
E P T E Q+++ + + ++YLH + I HRD+K+ NIL K+++FG S
Sbjct: 128 LERPLT-ESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVS- 182
Query: 136 SRAVDQTHITTQVHGTFGYLNPD----------------DVCSFGVVLVEL 170
++ GT ++ P+ DV S G+ L+E+
Sbjct: 183 AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ +F +R + T ++ T+ +
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRAPEIM 194
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 247
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 248 KKISSESA 255
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 60/146 (41%), Gaps = 40/146 (27%)
Query: 101 HLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTS------RSRAVDQ--------THITT 146
HL + + + HRD+K +N+L++ K+ +FG S ++ +D I
Sbjct: 124 HLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINP 183
Query: 147 QVHGTFGYLNPDDVCSFGVVLVELLTGAKPIRF------TTFEEDKNIT----------- 189
+++ GY D+ S G+ ++EL +RF T F++ K +
Sbjct: 184 ELNQK-GYSVKSDIWSLGITMIELAI----LRFPYDSWGTPFQQLKQVVEEPSPQLPADK 238
Query: 190 ----VAKHAKRCLNPSGKKRPAMKEV 211
+CL + K+RP E+
Sbjct: 239 FSAEFVDFTSQCLKKNSKERPTYPEL 264
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ + G +R + T ++ T+ +
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 247
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 248 KKISSESA 255
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 10/101 (9%)
Query: 100 LHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVD--QTHITTQ--------VH 149
LH+ + HRD+ NILL D + +F +R D +TH T V
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVM 206
Query: 150 GTFGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITV 190
G+ D+ S G V+ E+ R +TF N V
Sbjct: 207 QFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 35 YKGMAKVEKFINEVVIQSQINHINVVKLIGCCLETKYMHDQNKELPFTWEM--------- 85
++ ++ E+V+ +NH N++ L+ K + ++ +++ E+
Sbjct: 55 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL-EEFQDVYIVMELMDANLCQVI 113
Query: 86 QLRISIEASGTMSYLHLSA-----SVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS---- 136
Q+ + E + Y L S I HRD+K +NI++ K+ +FG +R+
Sbjct: 114 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 173
Query: 137 -----RAVDQTHITTQVHGTFGYLNPDDVCSFGVVLVELL 171
V + + +V GY D+ S G ++ E++
Sbjct: 174 FMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 213
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 66/173 (38%), Gaps = 40/173 (23%)
Query: 37 GMAKVEKFINEVVIQSQINHINVVKLIG----------------CCLETKYMHDQNKELP 80
G A V+K E+ + ++ H NV++L+ C + M D E
Sbjct: 49 GEANVKK---EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKR 105
Query: 81 FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSR--- 137
F + + YLH S I H+DIK N+LL K+S G + +
Sbjct: 106 FPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162
Query: 138 AVDQTHITTQVHGTFGYLNPD-------------DVCSFGVVLVELLTGAKPI 177
A D T T+Q G+ + P+ D+ S GV L + TG P
Sbjct: 163 AADDTCRTSQ--GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPF 213
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 40/141 (28%)
Query: 40 KVEKFINEVVIQSQINHINVVKLIGCCLETK----------------------------- 70
K+ ++EV + + +NH VV+ LE +
Sbjct: 45 KLSTILSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYD 104
Query: 71 YMHDQN--KELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKV 128
+H +N ++ W + R +EA +SY+H S I HR++K NI +D+ K+
Sbjct: 105 LIHSENLNQQRDEYWRL-FRQILEA---LSYIH---SQGIIHRNLKPXNIFIDESRNVKI 157
Query: 129 SNFGTSRS--RAVDQTHITTQ 147
+FG +++ R++D + +Q
Sbjct: 158 GDFGLAKNVHRSLDILKLDSQ 178
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 15/93 (16%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKY---CAKVSNFGTSRSRAVDQT---------HI 144
+ YLH S+ I HRD+K N+L K K+++FG ++ + ++
Sbjct: 174 IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 230
Query: 145 TTQVHGTFGYLNPDDVCSFGVVLVELLTGAKPI 177
+V G Y D S GV+ LL G P
Sbjct: 231 APEVLGPEKYDKSCDXWSLGVIXYILLCGYPPF 263
>pdb|1CCW|B Chain B, Structure Of The Coenzyme B12 Dependent Enzyme Glutamate
Mutase From Clostridium Cochlearium
pdb|1CCW|D Chain D, Structure Of The Coenzyme B12 Dependent Enzyme Glutamate
Mutase From Clostridium Cochlearium
pdb|1CB7|B Chain B, Glutamate Mutase From Clostridium Cochlearium
Reconstituted With Methyl-Cobalamin
pdb|1CB7|D Chain D, Glutamate Mutase From Clostridium Cochlearium
Reconstituted With Methyl-Cobalamin
pdb|1I9C|B Chain B, Glutamate Mutase From Clostridium Cochlearium: Complex
With Adenosylcobalamin And Substrate
pdb|1I9C|D Chain D, Glutamate Mutase From Clostridium Cochlearium: Complex
With Adenosylcobalamin And Substrate
Length = 483
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 17/154 (11%)
Query: 135 RSRAVDQTHITTQVHGTFGYLNPDDVCSFGVVL----VELLTGAKPIRFTTFEE------ 184
++ + +TT H G D+ +FGV++ + L GA + T E
Sbjct: 277 KAYGYNDVFVTTVFHQWMGGFPQDESKAFGVIVTATTIAALAGATKVIVKTPHEAIGIPT 336
Query: 185 -DKNITVAKHAKRCLNP-SGKKRPAMKEVASELAGIKAWNGA-SNVMEEGILGRAPTVGG 241
+ N K K LN G++ P KE+ +E+A IKA + M E LG+ G
Sbjct: 337 KEANAAGIKATKMALNMLEGQRMPMSKELETEMAVIKAETKCILDKMFE--LGKGDLAIG 394
Query: 242 TFKPVPQPRLEVPARTGRHRFSQQMRLPCDSNWG 275
T K +++P G +++ +P N G
Sbjct: 395 TVKAFETGVMDIP--FGPSKYNAGKMMPVRDNLG 426
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 10/101 (9%)
Query: 100 LHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVD--QTHITTQ--------VH 149
LH+ + HRD+ NILL D + +F +R D +TH T V
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVM 206
Query: 150 GTFGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITV 190
G+ D+ S G V+ E+ R +TF N V
Sbjct: 207 QFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ + G +R + T ++ T+ +
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 247
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 248 KKISSESA 255
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 38/164 (23%)
Query: 44 FINEVVIQSQINHINVVKLIGCCLET-------KYMHDQNKELPFTWEMQLRISIEASGT 96
F+ E +I S++NH N+V+ IG L++ + M + + F E + R S +S
Sbjct: 95 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLK-SFLRETRPRPSQPSSLA 153
Query: 97 M-SYLHLSASVP----------IYHRDIKSTNILL---DDKYCAKVSNFGTSRS--RA-- 138
M LH++ + HRDI + N LL AK+ +FG +R RA
Sbjct: 154 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 213
Query: 139 ----------VDQTHITTQVHGTFGYLNPDDVCSFGVVLVELLT 172
V + G F + D SFGV+L E+ +
Sbjct: 214 YRKGGCAMLPVKWMPPEAFMEGIF--TSKTDTWSFGVLLWEIFS 255
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 86/226 (38%), Gaps = 72/226 (31%)
Query: 14 EKATDSFNVNRILGQGGQDIVYKGMAK-------------------------VEKFINEV 48
E + + + R LGQG +VY+G A+ +E F+NE
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEA 70
Query: 49 VIQSQINHINVVKLIGCCLETK----------------YMHDQNKEL-------PFTWEM 85
+ +VV+L+G + + Y+ E P T +
Sbjct: 71 SVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 130
Query: 86 QLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHIT 145
++++ E + M+YL+ V HRD+ + N ++ + K+ +FG +R D
Sbjct: 131 MIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTR----DIYETD 183
Query: 146 TQVHGTFG-----YLNPD-----------DVCSFGVVLVELLTGAK 175
G G ++ P+ D+ SFGVVL E+ + A+
Sbjct: 184 YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 229
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 38/164 (23%)
Query: 44 FINEVVIQSQINHINVVKLIGCCLET-------KYMHDQNKELPFTWEMQLRISIEASGT 96
F+ E +I S++NH N+V+ IG L++ + M + + F E + R S +S
Sbjct: 81 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLK-SFLRETRPRPSQPSSLA 139
Query: 97 M-SYLHLSASVP----------IYHRDIKSTNILL---DDKYCAKVSNFGTSRS--RA-- 138
M LH++ + HRDI + N LL AK+ +FG +R RA
Sbjct: 140 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 199
Query: 139 ----------VDQTHITTQVHGTFGYLNPDDVCSFGVVLVELLT 172
V + G F + D SFGV+L E+ +
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIF--TSKTDTWSFGVLLWEIFS 241
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 16/110 (14%)
Query: 110 HRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLNPD----------- 158
HRD+K NIL+ A + +FG + + ++ GT Y P+
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 159 DVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
D+ + VL E LTG+ P ++ D+ H + + RP +
Sbjct: 217 DIYALTCVLYECLTGSPP-----YQGDQLSVXGAHINQAIPRPSTVRPGI 261
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 18/128 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H S I HRD+K +N+ +++ K+ + G +R + T ++ T+ +
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 152 ---FGYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAM 208
Y D+ S G ++ ELLTG T F +I K R + G + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR-----TLFPGTDHIDQLKLILRLVGTPGAE--LL 247
Query: 209 KEVASELA 216
K+++SE A
Sbjct: 248 KKISSESA 255
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 25/111 (22%)
Query: 85 MQLRISIEASGTMSYLHLS-----ASVPIYHRDIKSTNILLDDKYCAKVSNFGTS--RSR 137
+ LR+++ A+ +++LH+ I HRD KS N+L+ +++ G + S+
Sbjct: 106 LALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQ 165
Query: 138 AVDQTHITTQVH-GTFGYLNPD-----------------DVCSFGVVLVEL 170
D I GT Y+ P+ D+ +FG+VL E+
Sbjct: 166 GSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 88/226 (38%), Gaps = 57/226 (25%)
Query: 18 DSFNVNRILGQGGQDIVYKGMAK------VEKFIN------------EVVIQSQINHINV 59
D +++ LG G +V++ + K V KFIN E+ I +Q++H +
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 110
Query: 60 VKLIGCCLETKYMHDQNKELPFTWEMQLRISIE---------------ASGTMSYLHLSA 104
+ L E KY E E+ RI+ E A + ++H +
Sbjct: 111 INLHDA-FEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS 169
Query: 105 SVPIYHRDIKSTNILLDDKYCA--KVSNFGTSRSRAVDQTHITTQVHGTF---------- 152
I H DIK NI+ + K + K+ +FG + D+ T F
Sbjct: 170 ---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREP 226
Query: 153 -GYLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRC 197
G+ D+ + GV+ LL+G P F + ++ ++ KRC
Sbjct: 227 VGFYT--DMWAIGVLGYVLLSGLSP-----FAGEDDLETLQNVKRC 265
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 18/84 (21%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKY---CAKVSNFGTSRSRAVDQTHITTQVHGTFG 153
+ YLH S+ I HRD+K N+L K K+++FG ++ ++
Sbjct: 130 IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEK------------ 174
Query: 154 YLNPDDVCSFGVVLVELLTGAKPI 177
Y D+ S GV++ LL G P
Sbjct: 175 YDKSCDMWSLGVIMYILLCGYPPF 198
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 83/220 (37%), Gaps = 62/220 (28%)
Query: 15 KATDSFNVNRILGQG-------------GQDIVYKGMAKVEKFIN-EVVIQSQI---NHI 57
K D F V R+ GQG G + K + + +F N E+ I + +H
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHP 79
Query: 58 NVVKL------IG----------------------CCLETKYMHDQNKELPFTWEMQLRI 89
N+V+L +G CC Y Q P ++ L
Sbjct: 80 NIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCC--RNYYRRQVAPPPILIKVFLFQ 137
Query: 90 SIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKY-CAKVSNFGTSRSRAVDQTHIT--- 145
I + G LHL SV + HRDIK N+L+++ K+ +FG+++ + + ++
Sbjct: 138 LIRSIGC---LHL-PSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYIC 193
Query: 146 -------TQVHGTFGYLNPDDVCSFGVVLVELLTGAKPIR 178
+ G Y D+ S G + E++ G R
Sbjct: 194 SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFR 233
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 88/239 (36%), Gaps = 49/239 (20%)
Query: 20 FNVNRILGQGGQDIVYKGMAKVEKFINEVVIQSQINHINVVKLIGCCL-ETKYMHDQNKE 78
+ + RIL QD E+ E + NH N+++L+ CL E H+
Sbjct: 57 YALKRILCHEQQD--------REEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL 108
Query: 79 LPF-----TWEMQLRISIEAS------------GTMSYLHLSASVPIYHRDIKSTNILLD 121
LPF W R+ + + G L + HRD+K TNILL
Sbjct: 109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLG 168
Query: 122 DKYCAKVSNFGTSRSRAV----DQTHITTQVHG----TFGYLNPD--------------D 159
D+ + + G+ + + +T Q T Y P+ D
Sbjct: 169 DEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTD 228
Query: 160 VCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAMKEVASELAGI 218
V S G VL ++ G P F++ ++ +A + + S + A+ ++ + + +
Sbjct: 229 VWSLGCVLYAMMFGEGPYDM-VFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTV 286
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 26/114 (22%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETK-----------YM------HD-----QNKELPFT 82
+ E+ I + H NVV LI C TK Y+ HD N + FT
Sbjct: 65 LREIKILQLLKHENVVNLIEIC-RTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFT 123
Query: 83 WEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS 136
R+ + Y+H + I HRD+K+ N+L+ K+++FG +R+
Sbjct: 124 LSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARA 174
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 26/114 (22%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETK-----------YM------HD-----QNKELPFT 82
+ E+ I + H NVV LI C TK Y+ HD N + FT
Sbjct: 65 LREIKILQLLKHENVVNLIEIC-RTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFT 123
Query: 83 WEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS 136
R+ + Y+H + I HRD+K+ N+L+ K+++FG +R+
Sbjct: 124 LSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARA 174
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 26/114 (22%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETK-----------YM------HD-----QNKELPFT 82
+ E+ I + H NVV LI C TK Y+ HD N + FT
Sbjct: 65 LREIKILQLLKHENVVNLIEIC-RTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFT 123
Query: 83 WEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS 136
R+ + Y+H + I HRD+K+ N+L+ K+++FG +R+
Sbjct: 124 LSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARA 174
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 26/114 (22%)
Query: 45 INEVVIQSQINHINVVKLIGCCLETK-----------YM------HD-----QNKELPFT 82
+ E+ I + H NVV LI C TK Y+ HD N + FT
Sbjct: 64 LREIKILQLLKHENVVNLIEIC-RTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFT 122
Query: 83 WEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS 136
R+ + Y+H + I HRD+K+ N+L+ K+++FG +R+
Sbjct: 123 LSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARA 173
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 14/112 (12%)
Query: 81 FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDK---YCAKVSNFGTSRSR 137
FT I + + +LH S I HRD+K N+L K K+++FG ++
Sbjct: 125 FTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET 181
Query: 138 AVD--QT------HITTQVHGTFGYLNPDDVCSFGVVLVELLTGAKPIRFTT 181
+ QT ++ +V G Y D+ S GV++ LL G P T
Sbjct: 182 TQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNT 233
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYC----AKVSNFGTSRSRAVDQTHITTQVHGTFGY 154
YLH S I H D+K NI+L DK K+ +FG + ++ + + GT +
Sbjct: 123 YLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK--IEAGNEFKNIFGTPEF 177
Query: 155 LNPD-----------DVCSFGVVLVELLTGAKPI 177
+ P+ D+ S GV+ LL+GA P
Sbjct: 178 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 14/112 (12%)
Query: 81 FTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDK---YCAKVSNFGTSRSR 137
FT I + + +LH S I HRD+K N+L K K+++FG ++
Sbjct: 106 FTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET 162
Query: 138 AVD--QT------HITTQVHGTFGYLNPDDVCSFGVVLVELLTGAKPIRFTT 181
+ QT ++ +V G Y D+ S GV++ LL G P T
Sbjct: 163 TQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNT 214
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYC----AKVSNFGTSRSRAVDQTHITTQVHGTFGY 154
YLH S I H D+K NI+L DK K+ +FG + ++ + + GT +
Sbjct: 130 YLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK--IEAGNEFKNIFGTPEF 184
Query: 155 LNPD-----------DVCSFGVVLVELLTGAKPI 177
+ P+ D+ S GV+ LL+GA P
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 32.0 bits (71), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 20/101 (19%)
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKYC----AKVSNFGTSRSRAVDQTHITTQVHGTFGY 154
YLH S I H D+K NI+L DK K+ +FG + ++ + + GT +
Sbjct: 144 YLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK--IEAGNEFKNIFGTPEF 198
Query: 155 LNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEE 184
+ P+ D+ S GV+ LL+GA P T +E
Sbjct: 199 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 239
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 32.0 bits (71), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 62/158 (39%), Gaps = 34/158 (21%)
Query: 45 INEVVIQSQIN---HINVVKLIGCCLETKYMHDQNKELPFTW-EMQLRISIEASGT---- 96
+ EV + ++ H NVV+L+ C ++ + L F + LR ++ +
Sbjct: 59 VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLP 118
Query: 97 --------------MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA---- 138
+ +LH + I HRD+K NIL+ K+++FG +R +
Sbjct: 119 AETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA 175
Query: 139 -----VDQTHITTQVHGTFGYLNPDDVCSFGVVLVELL 171
V + +V Y P D+ S G + E+
Sbjct: 176 LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 62/158 (39%), Gaps = 34/158 (21%)
Query: 45 INEVVIQSQIN---HINVVKLIGCCLETKYMHDQNKELPFTW-EMQLRISIEASGT---- 96
+ EV + ++ H NVV+L+ C ++ + L F + LR ++ +
Sbjct: 51 VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLP 110
Query: 97 --------------MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA---- 138
+ +LH + I HRD+K NIL+ K+++FG +R +
Sbjct: 111 AETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA 167
Query: 139 -----VDQTHITTQVHGTFGYLNPDDVCSFGVVLVELL 171
V + +V Y P D+ S G + E+
Sbjct: 168 LFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 62/158 (39%), Gaps = 34/158 (21%)
Query: 45 INEVVIQSQIN---HINVVKLIGCCLETKYMHDQNKELPFTW-EMQLRISIEASGT---- 96
+ EV + ++ H NVV+L+ C ++ + L F + LR ++ +
Sbjct: 51 VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLP 110
Query: 97 --------------MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRA---- 138
+ +LH + I HRD+K NIL+ K+++FG +R +
Sbjct: 111 AETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA 167
Query: 139 -----VDQTHITTQVHGTFGYLNPDDVCSFGVVLVELL 171
V + +V Y P D+ S G + E+
Sbjct: 168 LAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 31.6 bits (70), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 19/93 (20%)
Query: 99 YLHLSASVPIYHRDIKSTNILLDDKY---CAKVSNFGTSRSRAVDQTHITTQVHGTFGYL 155
YLH + I H D+K NILL Y K+ +FG SR + ++ GT YL
Sbjct: 146 YLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRK--IGHACELREIMGTPEYL 200
Query: 156 NPD-----------DVCSFGVVLVELLTGAKPI 177
P+ D+ + G++ LLT P
Sbjct: 201 APEILNYDPITTATDMWNIGIIAYMLLTHTSPF 233
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 31.6 bits (70), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 21/85 (24%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSR---SRAVDQTHITTQVHG------TFGYLNPD 158
+ HRD+K +N+L++ KV +FG +R A D + T Q G T Y P+
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPE 192
Query: 159 ------------DVCSFGVVLVELL 171
DV S G +L EL
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 31.6 bits (70), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 21/85 (24%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSR---SRAVDQTHITTQVHG------TFGYLNPD 158
+ HRD+K +N+L++ KV +FG +R A D + T Q G T Y P+
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPE 192
Query: 159 ------------DVCSFGVVLVELL 171
DV S G +L EL
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 31.6 bits (70), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 21/85 (24%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSR---SRAVDQTHITTQVHG------TFGYLNPD 158
+ HRD+K +N+L++ KV +FG +R A D + T Q G T Y P+
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
Query: 159 ------------DVCSFGVVLVELL 171
DV S G +L EL
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 31.6 bits (70), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 12/84 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR---------SRAVDQTHITTQ 147
+ +LH S + HRD+K NIL+ K+++FG +R S V + +
Sbjct: 133 LDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPE 189
Query: 148 VHGTFGYLNPDDVCSFGVVLVELL 171
V Y P D+ S G + E+
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 31.6 bits (70), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 12/84 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR---------SRAVDQTHITTQ 147
+ +LH S + HRD+K NIL+ K+++FG +R S V + +
Sbjct: 133 LDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPE 189
Query: 148 VHGTFGYLNPDDVCSFGVVLVELL 171
V Y P D+ S G + E+
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 12/84 (14%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR---------SRAVDQTHITTQ 147
+ +LH S + HRD+K NIL+ K+++FG +R S V + +
Sbjct: 133 LDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPE 189
Query: 148 VHGTFGYLNPDDVCSFGVVLVELL 171
V Y P D+ S G + E+
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 40/146 (27%)
Query: 101 HLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSR------SRAVDQ--------THITT 146
HL + + + HRD+K +N+L++ K +FG S ++ +D I
Sbjct: 151 HLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINP 210
Query: 147 QVHGTFGYLNPDDVCSFGVVLVELLTGAKPIRF------TTFEEDKNIT----------- 189
+++ GY D+ S G+ +EL +RF T F++ K +
Sbjct: 211 ELNQK-GYSVKSDIWSLGITXIELAI----LRFPYDSWGTPFQQLKQVVEEPSPQLPADK 265
Query: 190 ----VAKHAKRCLNPSGKKRPAMKEV 211
+CL + K+RP E+
Sbjct: 266 FSAEFVDFTSQCLKKNSKERPTYPEL 291
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 31.2 bits (69), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 25/109 (22%)
Query: 87 LRISIEASGTMSYLHLS-----ASVPIYHRDIKSTNILLDDKYCAKVSNFGTS--RSRAV 139
LRI + + +++LH+ I HRD+KS NIL+ +++ G + S++
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 167
Query: 140 DQTHITTQVH-GTFGYLNPD-----------------DVCSFGVVLVEL 170
+Q + GT Y+ P+ D+ +FG+VL E+
Sbjct: 168 NQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 31.2 bits (69), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 25/109 (22%)
Query: 87 LRISIEASGTMSYLHLS-----ASVPIYHRDIKSTNILLDDKYCAKVSNFGTS--RSRAV 139
LRI + + +++LH+ I HRD+KS NIL+ +++ G + S++
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 167
Query: 140 DQTHITTQVH-GTFGYLNPD-----------------DVCSFGVVLVEL 170
+Q + GT Y+ P+ D+ +FG+VL E+
Sbjct: 168 NQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 30.8 bits (68), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 25/109 (22%)
Query: 87 LRISIEASGTMSYLHLS-----ASVPIYHRDIKSTNILLDDKYCAKVSNFGTS--RSRAV 139
LRI + + +++LH+ I HRD+KS NIL+ +++ G + S++
Sbjct: 137 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 196
Query: 140 DQTHITTQVH-GTFGYLNPD-----------------DVCSFGVVLVEL 170
+Q + GT Y+ P+ D+ +FG+VL E+
Sbjct: 197 NQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 30.8 bits (68), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 21/113 (18%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYC----AKVSNFGTSRSRAVDQTHITTQVHGTF 152
++YLH + I H D+K NI+L DK K+ +FG + ++ + GT
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE--IEDGVEFKNIFGTP 182
Query: 153 GYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNITVAKH 193
++ P+ D+ S GV+ LL+GA P T +E NIT +
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSY 235
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 30.8 bits (68), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQT-HITTQVHGT---- 151
+ Y+H + I HRD+K N+ +++ K+ +FG +R + + T+ +
Sbjct: 141 LRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVI 197
Query: 152 ---FGYLNPDDVCSFGVVLVELLTG 173
Y D+ S G ++ E++TG
Sbjct: 198 LNWMRYTQTVDIWSVGCIMAEMITG 222
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 30.8 bits (68), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 21/113 (18%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYC----AKVSNFGTSRSRAVDQTHITTQVHGTF 152
++YLH + I H D+K NI+L DK K+ +FG + ++ + GT
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE--IEDGVEFKNIFGTP 182
Query: 153 GYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNITVAKH 193
++ P+ D+ S GV+ LL+GA P T +E NIT +
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSY 235
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 21/113 (18%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYC----AKVSNFGTSRSRAVDQTHITTQVHGTF 152
++YLH + I H D+K NI+L DK K+ +FG + ++ + GT
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE--IEDGVEFKNIFGTP 182
Query: 153 GYLNPD-----------DVCSFGVVLVELLTGAKPIRFTTFEED-KNITVAKH 193
++ P+ D+ S GV+ LL+GA P T +E NIT +
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSY 235
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 20/96 (20%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYC----AKVSNFGTSRSRAVDQTHITTQVHGTF 152
++YLH + I H D+K NI+L DK K+ +FG + ++ + GT
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE--IEDGVEFKNIFGTP 182
Query: 153 GYLNPD-----------DVCSFGVVLVELLTGAKPI 177
++ P+ D+ S GV+ LL+GA P
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 20/96 (20%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYC----AKVSNFGTSRSRAVDQTHITTQVHGTF 152
++YLH + I H D+K NI+L DK K+ +FG + ++ + GT
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE--IEDGVEFKNIFGTP 182
Query: 153 GYLNPD-----------DVCSFGVVLVELLTGAKPI 177
++ P+ D+ S GV+ LL+GA P
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 20/96 (20%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYC----AKVSNFGTSRSRAVDQTHITTQVHGTF 152
++YLH + I H D+K NI+L DK K+ +FG + ++ + GT
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE--IEDGVEFKNIFGTP 182
Query: 153 GYLNPD-----------DVCSFGVVLVELLTGAKPI 177
++ P+ D+ S GV+ LL+GA P
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 37/134 (27%)
Query: 91 IEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCA------------------------ 126
IE ++YL + + H D+K NILLDD Y
Sbjct: 144 IEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTG 200
Query: 127 -KVSNFGTSRSRAVDQTHITT-------QVHGTFGYLNPDDVCSFGVVLVELLTGAKPIR 178
K+ +FG + ++ I +V G+ D+ SFG VL EL TG+ +
Sbjct: 201 IKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGS--LL 258
Query: 179 FTTFEEDKNITVAK 192
F T E +++ + +
Sbjct: 259 FRTHEHMEHLAMME 272
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 69/194 (35%), Gaps = 61/194 (31%)
Query: 18 DSFNVNRILGQGGQDIVYKG-------------MAKVEKFINEVVIQS--QINHINVVKL 62
D+ + ++G+G VYKG A + FINE I + H N+ +
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARF 72
Query: 63 I-----------------------GCCLETKYMHDQNKELPFTWEMQLRISIEASGTMSY 99
I G + +H + W R++ + ++Y
Sbjct: 73 IVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD------WVSSCRLAHSVTRGLAY 126
Query: 100 LHLSASVP--------IYHRDIKSTNILLDDKYCAKVSNFGTSRS-------RAVDQTHI 144
LH +P I HRD+ S N+L+ + +S+FG S R ++ +
Sbjct: 127 LH--TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNA 184
Query: 145 TTQVHGTFGYLNPD 158
GT Y+ P+
Sbjct: 185 AISEVGTIRYMAPE 198
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 13/83 (15%)
Query: 108 IYHRDIKSTNILLDDKYCA---KVSNFG----------TSRSRAVDQTHITTQVHGTFGY 154
I HRD+K N+LL K + K+ +FG + R + +V Y
Sbjct: 151 IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPY 210
Query: 155 LNPDDVCSFGVVLVELLTGAKPI 177
P DV GV+L LL+G P
Sbjct: 211 GKPVDVWGCGVILFILLSGCLPF 233
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 108 IYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQ-THITTQV 148
I HRD+K N LL+ K+ +FG +R+ D+ HI +
Sbjct: 152 IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDL 193
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 98 SYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRS 136
+++H S I HRD+K N LL+ KV +FG +R+
Sbjct: 143 NFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLART 178
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 62/150 (41%), Gaps = 24/150 (16%)
Query: 72 MHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILL--DDKYCAKVS 129
+H + L F +L IS S LH + I HRDIK N L + + K+
Sbjct: 154 IHGFRESLDFVQREKL-ISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLV 212
Query: 130 NFGTSRS----RAVDQTHITTQVHGTFGYLNPD-------------DVCSFGVVLVELLT 172
+FG S+ + +TT+ GT ++ P+ D S GV+L LL
Sbjct: 213 DFGLSKEFYKLNNGEYYGMTTKA-GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLM 271
Query: 173 GAKPIRFTTFEEDKNITVAKHAKRCL-NPS 201
GA P F + I+ + K C NP+
Sbjct: 272 GAVP--FPGVNDADTISQVLNKKLCFENPN 299
>pdb|3NL2|A Chain A, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL2|B Chain B, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL2|C Chain C, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL2|D Chain D, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL2|E Chain E, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL2|F Chain F, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL3|A Chain A, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL3|B Chain B, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL3|C Chain C, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL3|D Chain D, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL3|E Chain E, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL3|F Chain F, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL5|A Chain A, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL5|B Chain B, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL5|C Chain C, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL6|A Chain A, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL6|B Chain B, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL6|C Chain C, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NM3|A Chain A, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NM3|B Chain B, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NM3|C Chain C, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NM3|D Chain D, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NM3|E Chain E, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NM3|F Chain F, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
Length = 540
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 45/129 (34%), Gaps = 37/129 (28%)
Query: 114 KSTNIL--LDDKYCAKVSNFGTSRSRAVDQT------------------HITTQVHGTFG 153
KST IL L DK K N G S ++ T HIT +VH FG
Sbjct: 220 KSTKILRGLIDKTDYKFVNIGLSTKNSLTTTDEIQSIISNTLKARPLVQHITNKVHQNFG 279
Query: 154 YLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAMKEVAS 213
V L G+ PI E ++ HA LN P M +
Sbjct: 280 ------------ANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAPPEMLK--- 324
Query: 214 ELAGIKAWN 222
A I+A+N
Sbjct: 325 --AAIRAYN 331
>pdb|3NM1|A Chain A, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NM1|B Chain B, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NM1|C Chain C, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NM1|D Chain D, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NM1|E Chain E, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NM1|F Chain F, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
Length = 540
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 45/129 (34%), Gaps = 37/129 (28%)
Query: 114 KSTNIL--LDDKYCAKVSNFGTSRSRAVDQT------------------HITTQVHGTFG 153
KST IL L DK K N G S ++ T HIT +VH FG
Sbjct: 220 KSTKILRGLIDKTDYKFVNIGLSTKNSLTTTDEIQSIISNTLKARPLVQHITNKVHQNFG 279
Query: 154 YLNPDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPSGKKRPAMKEVAS 213
V L G+ PI E ++ HA LN P M +
Sbjct: 280 ------------ANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAPPEMLK--- 324
Query: 214 ELAGIKAWN 222
A I+A+N
Sbjct: 325 --AAIRAYN 331
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 68/164 (41%), Gaps = 33/164 (20%)
Query: 41 VEKFINEVVIQSQINHINVVKL-------------IGCCLETKYMHDQNKELPFTWEMQL 87
V++F E+ I ++H N+++L + C + + F
Sbjct: 67 VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA 126
Query: 88 RISIEASGTMSYLHLSASVPIYHRDIKSTNIL-LDDKYCA--KVSNFGTS---------R 135
RI + ++Y H + + HRD+K N L L D + K+ +FG + R
Sbjct: 127 RIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR 183
Query: 136 SRAVDQTHITTQV-HGTFGYLNPD-DVCSFGVVLVELLTGAKPI 177
++ +++ QV G +G P+ D S GV++ LL G P
Sbjct: 184 TKVGTPYYVSPQVLEGLYG---PECDEWSAGVMMYVLLCGYPPF 224
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 68/164 (41%), Gaps = 33/164 (20%)
Query: 41 VEKFINEVVIQSQINHINVVKL-------------IGCCLETKYMHDQNKELPFTWEMQL 87
V++F E+ I ++H N+++L + C + + F
Sbjct: 50 VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA 109
Query: 88 RISIEASGTMSYLHLSASVPIYHRDIKSTNIL-LDDKYCA--KVSNFGTS---------R 135
RI + ++Y H + + HRD+K N L L D + K+ +FG + R
Sbjct: 110 RIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR 166
Query: 136 SRAVDQTHITTQV-HGTFGYLNPD-DVCSFGVVLVELLTGAKPI 177
++ +++ QV G +G P+ D S GV++ LL G P
Sbjct: 167 TKVGTPYYVSPQVLEGLYG---PECDEWSAGVMMYVLLCGYPPF 207
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 28.1 bits (61), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 84 EMQLRISIEASGTMSYLHLS-----ASVPIYHRDIKSTNILLDDKYCAKVSNFGTS--RS 136
E +++++ + +++LH+ I HRD+KS NIL+ +++ G +
Sbjct: 106 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 165
Query: 137 RAVDQTHITTQVH-GTFGYLNPD 158
A D I GT Y+ P+
Sbjct: 166 SATDTIDIAPNHRVGTKRYMAPE 188
>pdb|2XN0|A Chain A, Structure Of Alpha-Galactosidase From Lactobacillus
Acidophilus Ncfm, Ptcl4 Derivative
pdb|2XN0|B Chain B, Structure Of Alpha-Galactosidase From Lactobacillus
Acidophilus Ncfm, Ptcl4 Derivative
pdb|2XN1|A Chain A, Structure Of Alpha-Galactosidase From Lactobacillus
Acidophilus Ncfm With Tris
pdb|2XN1|B Chain B, Structure Of Alpha-Galactosidase From Lactobacillus
Acidophilus Ncfm With Tris
pdb|2XN1|C Chain C, Structure Of Alpha-Galactosidase From Lactobacillus
Acidophilus Ncfm With Tris
pdb|2XN1|D Chain D, Structure Of Alpha-Galactosidase From Lactobacillus
Acidophilus Ncfm With Tris
Length = 732
Score = 28.1 bits (61), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 62 LIGCCLETKYMHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIK 114
LI + K H NK++ + +SIE GT+S+L+ +V Y+ +K
Sbjct: 5 LIKFDDQNKVFHLHNKQISYL------LSIEDGGTLSHLYFGGAVKNYNNQLK 51
>pdb|2XN2|A Chain A, Structure Of Alpha-Galactosidase From Lactobacillus
Acidophilus Ncfm With Galactose
Length = 732
Score = 28.1 bits (61), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 62 LIGCCLETKYMHDQNKELPFTWEMQLRISIEASGTMSYLHLSASVPIYHRDIK 114
LI + K H NK++ + +SIE GT+S+L+ +V Y+ +K
Sbjct: 5 LIKFDDQNKVFHLHNKQISYL------LSIEDGGTLSHLYFGGAVKNYNNQLK 51
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 28.1 bits (61), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 84 EMQLRISIEASGTMSYLHLS-----ASVPIYHRDIKSTNILLDDKYCAKVSNFGTS--RS 136
E +++++ + +++LH+ I HRD+KS NIL+ +++ G +
Sbjct: 101 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 160
Query: 137 RAVDQTHITTQVH-GTFGYLNPD 158
A D I GT Y+ P+
Sbjct: 161 SATDTIDIAPNHRVGTKRYMAPE 183
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 28.1 bits (61), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 12/84 (14%)
Query: 105 SVPIYHRDIKSTNILLDDK-YCAKVSNFGTSRSRAVDQTHITT----------QVHGTFG 153
S+ I HRDIK N+L++ K K+ +FG+++ + + + G
Sbjct: 159 SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATE 218
Query: 154 YLNPDDVCSFGVVLVELLTGAKPI 177
Y D+ S G V EL+ G KP+
Sbjct: 219 YTPSIDLWSIGCVFGELILG-KPL 241
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 28.1 bits (61), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 84 EMQLRISIEASGTMSYLHLS-----ASVPIYHRDIKSTNILLDDKYCAKVSNFGTS--RS 136
E +++++ + +++LH+ I HRD+KS NIL+ +++ G +
Sbjct: 103 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 162
Query: 137 RAVDQTHITTQVH-GTFGYLNPD 158
A D I GT Y+ P+
Sbjct: 163 SATDTIDIAPNHRVGTKRYMAPE 185
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 28.1 bits (61), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 84 EMQLRISIEASGTMSYLHLS-----ASVPIYHRDIKSTNILLDDKYCAKVSNFGTS--RS 136
E +++++ + +++LH+ I HRD+KS NIL+ +++ G +
Sbjct: 100 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159
Query: 137 RAVDQTHITTQVH-GTFGYLNPD 158
A D I GT Y+ P+
Sbjct: 160 SATDTIDIAPNHRVGTKRYMAPE 182
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 27.7 bits (60), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 82 TWEMQLRISIEASGTMSYLHLS-----ASVPIYHRDIKSTNILLDDKYCAKVSNFGTS-- 134
T E +++++ + +++LH+ I HRD+KS NIL+ +++ G +
Sbjct: 137 TVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 196
Query: 135 RSRAVDQTHITTQVH-GTFGYLNPD 158
A D I GT Y+ P+
Sbjct: 197 HDSATDTIDIAPNHRVGTKRYMAPE 221
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 27.7 bits (60), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 72 MHDQNKELPFTWEMQLRISIEASGTMSYLHLS-----ASVPIYHRDIKSTNILLDDKYCA 126
+ D T E +++++ + +++LH+ I HRD+KS NIL+
Sbjct: 114 LFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 173
Query: 127 KVSNFGTS--RSRAVDQTHITTQVH-GTFGYLNPD 158
+++ G + A D I GT Y+ P+
Sbjct: 174 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 208
>pdb|1MIO|B Chain B, X-Ray Crystal Structure Of The Nitrogenase Molybdenum-Iron
Protein From Clostridium Pasteurianum At 3.0 Angstroms
Resolution
pdb|1MIO|D Chain D, X-Ray Crystal Structure Of The Nitrogenase Molybdenum-Iron
Protein From Clostridium Pasteurianum At 3.0 Angstroms
Resolution
Length = 458
Score = 27.7 bits (60), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 38/105 (36%), Gaps = 2/105 (1%)
Query: 97 MSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTHITTQVHGTFGYLN 156
+ + H S YHR + S + + A S+F S ++I T V F N
Sbjct: 39 LPHSHGSQGCCSYHRTVLSRH--FKEPAMASTSSFTEGASVFGGGSNIKTAVKNIFSLYN 96
Query: 157 PDDVCSFGVVLVELLTGAKPIRFTTFEEDKNITVAKHAKRCLNPS 201
PD + L E L P + E+ +I K PS
Sbjct: 97 PDIIAVHTTCLSETLGDDLPTYISQMEDAGSIPEGKLVIHTNTPS 141
>pdb|3H11|A Chain A, Zymogen Caspase-8:c-Flipl Protease Domain Complex
pdb|3H13|A Chain A, C-Flipl Protease-Like Domain
Length = 272
Score = 27.7 bits (60), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 19/126 (15%)
Query: 31 QDIVYKGMAKVEKFINEVVIQSQINHINVVKLIGCCL-------ETKYMHDQNKELPFTW 83
Q+ V K + + E F+ + + + + + K +G CL ET+ + D L +
Sbjct: 13 QEPVKKSIQESEAFLPQSIPEERYKMKS--KPLGICLIIDCIGNETELLRDTFTSLGY-- 68
Query: 84 EMQLRISIEASGTMSYLHLSASVPIYHRDIKSTNILLDDKYCAKVSNFGTSRSRAVDQTH 143
E+Q + + G L A +P HRD D C VS G+ VDQTH
Sbjct: 69 EVQKFLHLSMHGISQILGQFACMP-EHRDY-------DSFVCVLVSRGGSQSVYGVDQTH 120
Query: 144 ITTQVH 149
+H
Sbjct: 121 SGLPLH 126
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 27.7 bits (60), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 52/129 (40%), Gaps = 27/129 (20%)
Query: 68 ETKYMHDQNKELPFTWEMQLRISIEASGTMSYLHLS-----ASVPIYHRDIKSTNILLDD 122
E ++D K + L+++ + + +LH I HRD+KS NIL+
Sbjct: 118 ENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKK 177
Query: 123 KYCAKVSNFGTSRSRAVDQTHI----TTQVHGTFGYLNPD-----------------DVC 161
+++ G + D + T+V GT Y+ P+ D+
Sbjct: 178 NGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRYMPPEVLDESLNRNHFQSYIMADMY 236
Query: 162 SFGVVLVEL 170
SFG++L E+
Sbjct: 237 SFGLILWEV 245
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,612,397
Number of Sequences: 62578
Number of extensions: 353009
Number of successful extensions: 2401
Number of sequences better than 100.0: 992
Number of HSP's better than 100.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 365
Number of HSP's that attempted gapping in prelim test: 1060
Number of HSP's gapped (non-prelim): 1129
length of query: 288
length of database: 14,973,337
effective HSP length: 98
effective length of query: 190
effective length of database: 8,840,693
effective search space: 1679731670
effective search space used: 1679731670
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)