BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044996
(678 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 150/290 (51%), Gaps = 21/290 (7%)
Query: 350 PEIKLSFVRDDVERFDLHDLLRAS-----AEILGSGCFGSSYKASLSTGAMMVVKRFKQM 404
PE+ L ++RF L +L AS ILG G FG YK L+ G ++ VKR K+
Sbjct: 10 PEVHLG----QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEE 65
Query: 405 NNVGRE-EFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALG 463
G E +FQ + + H NLL L + E+LLV+ ++ S+A L +
Sbjct: 66 RTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR-ERPES 124
Query: 464 QPSLDWPSRLKIVKGVAKGLQYLYREL-PSLIAPHGHIKSSNVLLNESLEPVLADYGLIP 522
QP LDWP R +I G A+GL YL+ P +I H +K++N+LL+E E V+ D+GL
Sbjct: 125 QPPLDWPKRQRIALGSARGLAYLHDHCDPKII--HRDVKAANILLDEEFEAVVGDFGLAK 182
Query: 523 VMNQES-----AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGK 577
+M+ + A I + +PE+L G+ ++KTDV+ GV++LE++TG+ + +
Sbjct: 183 LMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN 242
Query: 578 KADGDLASWVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCE 627
D L WV +L + D ++ E E+ +L+++ L C +
Sbjct: 243 DDDVMLLDWVKGLLKE-KKLEALVDVDLQGNYKDE-EVEQLIQVALLCTQ 290
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 150/290 (51%), Gaps = 21/290 (7%)
Query: 350 PEIKLSFVRDDVERFDLHDLLRAS-----AEILGSGCFGSSYKASLSTGAMMVVKRFKQM 404
PE+ L ++RF L +L AS ILG G FG YK L+ G ++ VKR K+
Sbjct: 18 PEVHLG----QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEE 73
Query: 405 NNVGRE-EFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALG 463
G E +FQ + + H NLL L + E+LLV+ ++ S+A L +
Sbjct: 74 RXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR-ERPES 132
Query: 464 QPSLDWPSRLKIVKGVAKGLQYLYREL-PSLIAPHGHIKSSNVLLNESLEPVLADYGLIP 522
QP LDWP R +I G A+GL YL+ P +I H +K++N+LL+E E V+ D+GL
Sbjct: 133 QPPLDWPKRQRIALGSARGLAYLHDHCDPKII--HRDVKAANILLDEEFEAVVGDFGLAK 190
Query: 523 VMNQES-----AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGK 577
+M+ + A I + +PE+L G+ ++KTDV+ GV++LE++TG+ + +
Sbjct: 191 LMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN 250
Query: 578 KADGDLASWVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCE 627
D L WV +L V D ++ E E+ +L+++ L C +
Sbjct: 251 DDDVMLLDWVKGLLKEKKLEALV-DVDLQGNYKDE-EVEQLIQVALLCTQ 298
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 128/243 (52%), Gaps = 14/243 (5%)
Query: 376 ILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYY 435
++G G FG YK L GA + +KR ++ G EEF+ + L RHP+L+ L+ +
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 436 RKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIA 495
+ E +L+++++ +L +L+G L S+ W RL+I G A+GL YL+ ++I
Sbjct: 106 ERNEMILIYKYMENGNLKRHLYGSD-LPTMSMSWEQRLEICIGAARGLHYLHTR--AII- 161
Query: 496 PHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL------MIAYKSPEFLQLGRITK 549
H +KS N+LL+E+ P + D+G+ + L + Y PE+ GR+T+
Sbjct: 162 -HRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTE 220
Query: 550 KTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMADER 609
K+DV+S GV++ E++ + + +Q + +LA W NG ++ D +AD+
Sbjct: 221 KSDVYSFGVVLFEVLCAR--SAIVQSLPREMVNLAEWAVESHNNG-QLEQIVDPNLADKI 277
Query: 610 NSE 612
E
Sbjct: 278 RPE 280
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 128/243 (52%), Gaps = 14/243 (5%)
Query: 376 ILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYY 435
++G G FG YK L GA + +KR ++ G EEF+ + L RHP+L+ L+ +
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 436 RKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIA 495
+ E +L+++++ +L +L+G L S+ W RL+I G A+GL YL+ ++I
Sbjct: 106 ERNEMILIYKYMENGNLKRHLYGSD-LPTMSMSWEQRLEICIGAARGLHYLHTR--AII- 161
Query: 496 PHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL------MIAYKSPEFLQLGRITK 549
H +KS N+LL+E+ P + D+G+ + L + Y PE+ GR+T+
Sbjct: 162 -HRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTE 220
Query: 550 KTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMADER 609
K+DV+S GV++ E++ + + +Q + +LA W NG ++ D +AD+
Sbjct: 221 KSDVYSFGVVLFEVLCAR--SAIVQSLPREMVNLAEWAVESHNNG-QLEQIVDPNLADKI 277
Query: 610 NSE 612
E
Sbjct: 278 RPE 280
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 111/205 (54%), Gaps = 21/205 (10%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREE----FQEHMRRLGRLRHPNLLPLVA 432
+G G FG YK ++ + VK+ M ++ EE F + ++ + + +H NL+ L+
Sbjct: 39 MGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
+ ++ LV+ ++P SL L G P L W R KI +G A G+ +L+
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMRCKIAQGAANGINFLHENH-- 153
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM-------IAYKSPEFLQLG 545
H IKS+N+LL+E+ ++D+GL +++ AQ +M AY +PE L+ G
Sbjct: 154 --HIHRDIKSANILLDEAFTAKISDFGLARA-SEKFAQTVMXSRIVGTTAYMAPEALR-G 209
Query: 546 RITKKTDVWSLGVLILEIMTGKFPA 570
IT K+D++S GV++LEI+TG PA
Sbjct: 210 EITPKSDIYSFGVVLLEIITG-LPA 233
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 111/205 (54%), Gaps = 21/205 (10%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREE----FQEHMRRLGRLRHPNLLPLVA 432
+G G FG YK ++ + VK+ M ++ EE F + ++ + + +H NL+ L+
Sbjct: 39 MGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
+ ++ LV+ ++P SL L G P L W R KI +G A G+ +L+
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMRCKIAQGAANGINFLHENH-- 153
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM-------IAYKSPEFLQLG 545
H IKS+N+LL+E+ ++D+GL +++ AQ +M AY +PE L+ G
Sbjct: 154 --HIHRDIKSANILLDEAFTAKISDFGLARA-SEKFAQTVMXXRIVGTTAYMAPEALR-G 209
Query: 546 RITKKTDVWSLGVLILEIMTGKFPA 570
IT K+D++S GV++LEI+TG PA
Sbjct: 210 EITPKSDIYSFGVVLLEIITG-LPA 233
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 111/205 (54%), Gaps = 21/205 (10%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREE----FQEHMRRLGRLRHPNLLPLVA 432
+G G FG YK ++ + VK+ M ++ EE F + ++ + + +H NL+ L+
Sbjct: 33 MGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 91
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
+ ++ LV+ ++P SL L G P L W R KI +G A G+ +L+
Sbjct: 92 FSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMRCKIAQGAANGINFLHENH-- 147
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM-------IAYKSPEFLQLG 545
H IKS+N+LL+E+ ++D+GL +++ AQ +M AY +PE L+ G
Sbjct: 148 --HIHRDIKSANILLDEAFTAKISDFGLARA-SEKFAQXVMXXRIVGTTAYMAPEALR-G 203
Query: 546 RITKKTDVWSLGVLILEIMTGKFPA 570
IT K+D++S GV++LEI+TG PA
Sbjct: 204 EITPKSDIYSFGVVLLEIITG-LPA 227
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 107/204 (52%), Gaps = 21/204 (10%)
Query: 378 GSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREE----FQEHMRRLGRLRHPNLLPLVAY 433
G G FG YK ++ + VK+ M ++ EE F + ++ + +H NL+ L+ +
Sbjct: 31 GEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
++ LV+ + P SL L G P L W R KI +G A G+ +L+
Sbjct: 90 SSDGDDLCLVYVYXPNGSLLDRLSCLD--GTPPLSWHXRCKIAQGAANGINFLHENH--- 144
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL-------MIAYKSPEFLQLGR 546
H IKS+N+LL+E+ ++D+GL +++ AQ + AY +PE L+ G
Sbjct: 145 -HIHRDIKSANILLDEAFTAKISDFGLARA-SEKFAQXVXXSRIVGTTAYXAPEALR-GE 201
Query: 547 ITKKTDVWSLGVLILEIMTGKFPA 570
IT K+D++S GV++LEI+TG PA
Sbjct: 202 ITPKSDIYSFGVVLLEIITG-LPA 224
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 105/199 (52%), Gaps = 14/199 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG+G FG + + + VK K + + F E + L+H L+ L A R
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+E ++ E++ K SL L + G+ L P + +A+G+ Y+ R+ + I
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEG-GKVLL--PKLIDFSAQIAEGMAYIERK--NYI-- 132
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRITKKT 551
H ++++NVL++ESL +AD+GL V+ N+ +A+E I + +PE + G T K+
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 192
Query: 552 DVWSLGVLILEIMT-GKFP 569
DVWS G+L+ EI+T GK P
Sbjct: 193 DVWSFGILLYEIVTYGKIP 211
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 105/199 (52%), Gaps = 15/199 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG GCFG + + + + +K K N+ E F + + + +LRH L+ L A
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GNMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 250
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+E +V E++ K SL L G +G+ L P + + +A G+ Y+ R +
Sbjct: 251 EEPIYIVTEYMSKGSLLDFLKGE--MGK-YLRLPQLVDMAAQIASGMAYVER----MNYV 303
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRITKKT 551
H ++++N+L+ E+L +AD+GL ++ N+ +A++ I + +PE GR T K+
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 363
Query: 552 DVWSLGVLILEIMT-GKFP 569
DVWS G+L+ E+ T G+ P
Sbjct: 364 DVWSFGILLTELTTKGRVP 382
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 105/199 (52%), Gaps = 14/199 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG+G FG + + + VK K + + F E + L+H L+ L A +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+E ++ EF+ K SL L + G+ L P + +A+G+ Y+ R+ + I
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEG-GKVLL--PKLIDFSAQIAEGMAYIERK--NYI-- 131
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRITKKT 551
H ++++NVL++ESL +AD+GL V+ N+ +A+E I + +PE + G T K+
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 191
Query: 552 DVWSLGVLILEIMT-GKFP 569
+VWS G+L+ EI+T GK P
Sbjct: 192 NVWSFGILLYEIVTYGKIP 210
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 15/199 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG GCFG + + + + +K K + E F + + + +LRH L+ L A
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 249
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+E +V E++ K SL L G L P + + +A G+ Y+ R +
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVER----MNYV 302
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRITKKT 551
H ++++N+L+ E+L +AD+GL ++ N+ +A++ I + +PE GR T K+
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 552 DVWSLGVLILEIMT-GKFP 569
DVWS G+L+ E+ T G+ P
Sbjct: 363 DVWSFGILLTELTTKGRVP 381
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 15/199 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG GCFG + + + + +K K + E F + + + +LRH L+ L A
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 332
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+E +V E++ K SL L G L P + + +A G+ Y+ R +
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVER----MNYV 385
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRITKKT 551
H ++++N+L+ E+L +AD+GL ++ N+ +A++ I + +PE GR T K+
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 445
Query: 552 DVWSLGVLILEIMT-GKFP 569
DVWS G+L+ E+ T G+ P
Sbjct: 446 DVWSFGILLTELTTKGRVP 464
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 15/199 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG GCFG + + + + +K K + E F + + + +LRH L+ L A
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 249
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+E +V E++ K SL L G L P + + +A G+ Y+ R +
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVER----MNYV 302
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRITKKT 551
H ++++N+L+ E+L +AD+GL ++ N+ +A++ I + +PE GR T K+
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 552 DVWSLGVLILEIMT-GKFP 569
DVWS G+L+ E+ T G+ P
Sbjct: 363 DVWSFGILLTELTTKGRVP 381
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 15/199 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG GCFG + + + + +K K + E F + + + +LRH L+ L A
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 249
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+E +V E++ K SL L G L P + + +A G+ Y+ R +
Sbjct: 250 EEPIYIVGEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVER----MNYV 302
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRITKKT 551
H ++++N+L+ E+L +AD+GL ++ N+ +A++ I + +PE GR T K+
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 552 DVWSLGVLILEIMT-GKFP 569
DVWS G+L+ E+ T G+ P
Sbjct: 363 DVWSFGILLTELTTKGRVP 381
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 15/199 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG+G FG + A+ + + VK K ++ E F + L+H L+ L A
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKLHAVV-T 253
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
KE ++ EF+ K SL L + QP P + +A+G+ ++ E + I
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEGSKQPL---PKLIDFSAQIAEGMAFI--EQRNYI-- 306
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRITKKT 551
H ++++N+L++ SL +AD+GL V+ N+ +A+E I + +PE + G T K+
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 366
Query: 552 DVWSLGVLILEIMT-GKFP 569
DVWS G+L++EI+T G+ P
Sbjct: 367 DVWSFGILLMEIVTYGRIP 385
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 15/199 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG GCFG + + + + +K K + E F + + + +LRH L+ L A
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 73
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+E +V E++ K SL L G L P + + +A G+ Y+ R +
Sbjct: 74 EEPIXIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVER----MNYV 126
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRITKKT 551
H ++++N+L+ E+L +AD+GL ++ N+ +A++ I + +PE GR T K+
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 186
Query: 552 DVWSLGVLILEIMT-GKFP 569
DVWS G+L+ E+ T G+ P
Sbjct: 187 DVWSFGILLTELTTKGRVP 205
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 104/199 (52%), Gaps = 15/199 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG GCFG + + + + +K K + E F + + + +LRH L+ L A
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 74
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+E +V E++ K SL L G +G+ L P + + +A G+ Y+ R +
Sbjct: 75 EEPIYIVTEYMSKGSLLDFLKGE--MGK-YLRLPQLVDMAAQIASGMAYVER----MNYV 127
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRITKKT 551
H ++++N+L+ E+L +AD+GL ++ N+ +A++ I + +PE GR T K+
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 552 DVWSLGVLILEIMT-GKFP 569
DVWS G+L+ E+ T G+ P
Sbjct: 188 DVWSFGILLTELTTKGRVP 206
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 104/199 (52%), Gaps = 15/199 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG GCFG + + + + +K K + E F + + + +LRH L+ L A
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+E +V E++ K SL L G +G+ L P + + +A G+ Y+ R +
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGE--MGK-YLRLPQLVDMAAQIASGMAYVER----MNYV 136
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRITKKT 551
H ++++N+L+ E+L +AD+GL ++ N+ +A++ I + +PE GR T K+
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 552 DVWSLGVLILEIMT-GKFP 569
DVWS G+L+ E+ T G+ P
Sbjct: 197 DVWSFGILLTELTTKGRVP 215
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 104/199 (52%), Gaps = 15/199 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG GCFG + + + + +K K + E F + + + +LRH L+ L A
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 72
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+E +V E++ K SL L G +G+ L P + + +A G+ Y+ R +
Sbjct: 73 EEPIYIVTEYMSKGSLLDFLKGE--MGK-YLRLPQLVDMAAQIASGMAYVER----MNYV 125
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRITKKT 551
H ++++N+L+ E+L +AD+GL ++ N+ +A++ I + +PE GR T K+
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 185
Query: 552 DVWSLGVLILEIMT-GKFP 569
DVWS G+L+ E+ T G+ P
Sbjct: 186 DVWSFGILLTELTTKGRVP 204
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 104/199 (52%), Gaps = 15/199 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG GCFG + + + + +K K + E F + + + +LRH L+ L A
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+E +V E++ K SL L G +G+ L P + + +A G+ Y+ R +
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGE--MGK-YLRLPQLVDMAAQIASGMAYVER----MNYV 136
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRITKKT 551
H ++++N+L+ E+L +AD+GL ++ N+ +A++ I + +PE GR T K+
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 552 DVWSLGVLILEIMT-GKFP 569
DVWS G+L+ E+ T G+ P
Sbjct: 197 DVWSFGILLTELTTKGRVP 215
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 15/199 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG+G FG + A+ + + VK K ++ E F + L+H L+ L A
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKLHAVV-T 80
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
KE ++ EF+ K SL L + QP P + +A+G+ ++ E + I
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEGSKQPL---PKLIDFSAQIAEGMAFI--EQRNYI-- 133
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRITKKT 551
H ++++N+L++ SL +AD+GL V+ N+ +A+E I + +PE + G T K+
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 193
Query: 552 DVWSLGVLILEIMT-GKFP 569
DVWS G+L++EI+T G+ P
Sbjct: 194 DVWSFGILLMEIVTYGRIP 212
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 104/199 (52%), Gaps = 15/199 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG GCFG + + + + +K K + E F + + + +LRH L+ L A
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+E +V E++ K SL L G +G+ L P + + +A G+ Y+ R +
Sbjct: 84 EEPIYIVCEYMSKGSLLDFLKGE--MGK-YLRLPQLVDMAAQIASGMAYVER----MNYV 136
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRITKKT 551
H ++++N+L+ E+L +AD+GL ++ N+ +A++ I + +PE GR T K+
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 552 DVWSLGVLILEIMT-GKFP 569
DVWS G+L+ E+ T G+ P
Sbjct: 197 DVWSFGILLTELTTKGRVP 215
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 15/199 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG GCFG + + + + +K K + E F + + + +LRH L+ L A
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 76
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+E +V E++ K SL L G L P + + +A G+ Y+ R +
Sbjct: 77 EEPIYIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVER----MNYV 129
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRITKKT 551
H ++++N+L+ E+L +AD+GL ++ N+ +A++ I + +PE GR T K+
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 189
Query: 552 DVWSLGVLILEIMT-GKFP 569
DVWS G+L+ E+ T G+ P
Sbjct: 190 DVWSFGILLTELTTKGRVP 208
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 104/199 (52%), Gaps = 15/199 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG GCFG + + + + +K K + E F + + + +LRH L+ L A
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+E +V E++ K SL L G +G+ L P + + +A G+ Y+ R +
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGE--MGK-YLRLPQLVDMAAQIASGMAYVER----MNYV 136
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRITKKT 551
H ++++N+L+ E+L +AD+GL ++ N+ +A++ I + +PE GR T K+
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 552 DVWSLGVLILEIMT-GKFP 569
DVWS G+L+ E+ T G+ P
Sbjct: 197 DVWSFGILLTELTTKGRVP 215
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 104/199 (52%), Gaps = 15/199 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG GCFG + + + + +K K + E F + + + ++RH L+ L A
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKIRHEKLVQLYAVV-S 83
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+E +V E++ K SL L G +G+ L P + + +A G+ Y+ R +
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGE--MGK-YLRLPQLVDMAAQIASGMAYVER----MNYV 136
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRITKKT 551
H ++++N+L+ E+L +AD+GL ++ N+ +A++ I + +PE GR T K+
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 552 DVWSLGVLILEIMT-GKFP 569
DVWS G+L+ E+ T G+ P
Sbjct: 197 DVWSFGILLTELTTKGRVP 215
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG GCFG + + + + +K K + E F + + + +LRH L+ L A
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+E +V E++ K SL L G +G+ L P + + +A G+ Y+ R +
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGE--MGK-YLRLPQLVDMAAQIASGMAYVER----MNYV 136
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRITKKT 551
H + ++N+L+ E+L +AD+GL ++ N+ +A++ I + +PE GR T K+
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 552 DVWSLGVLILEIMT-GKFP 569
DVWS G+L+ E+ T G+ P
Sbjct: 197 DVWSFGILLTELTTKGRVP 215
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 15/199 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG GCFG + + + + +K K + E F + + + +LRH L+ L A
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 80
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+E +V E++ K SL L G L P + + +A G+ Y+ R +
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETG---KYLRLPQLVDMSAQIASGMAYVER----MNYV 133
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRITKKT 551
H ++++N+L+ E+L +AD+GL ++ N+ +A++ I + +PE GR T K+
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 552 DVWSLGVLILEIMT-GKFP 569
DVWS G+L+ E+ T G+ P
Sbjct: 194 DVWSFGILLTELTTKGRVP 212
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 15/199 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG GCFG + + + + +K K + E F + + + +LRH L+ L A
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 80
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+E +V E++ K SL L G L P + + +A G+ Y+ R +
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETG---KYLRLPQLVDMSAQIASGMAYVER----MNYV 133
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRITKKT 551
H ++++N+L+ E+L +AD+GL ++ N+ +A++ I + +PE GR T K+
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 552 DVWSLGVLILEIMT-GKFP 569
DVWS G+L+ E+ T G+ P
Sbjct: 194 DVWSFGILLTELTTKGRVP 212
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 31/221 (14%)
Query: 367 HDLLRAS----AEILGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRLGR 421
H + R S E+LG GCFG + K + TG +MV+K + + + F + ++ +
Sbjct: 4 HRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRC 63
Query: 422 LRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAK 481
L HPN+L + Y+ + + E++ +L + + W R+ K +A
Sbjct: 64 LEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDS----QYPWSQRVSFAKDIAS 119
Query: 482 GLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMI------- 534
G+ YL+ S+ H + S N L+ E+ V+AD+GL +M E Q +
Sbjct: 120 GMAYLH----SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPD 175
Query: 535 -----------AYKSPEFLQLGRITKKTDVWSLGVLILEIM 564
+ +PE + +K DV+S G+++ EI+
Sbjct: 176 RKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG GCFG + + + + +K K + E F + + + +LRH L+ L A
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+E +V E++ K L L G +G+ L P + + +A G+ Y+ R +
Sbjct: 84 EEPIYIVTEYMSKGCLLDFLKGE--MGK-YLRLPQLVDMAAQIASGMAYVER----MNYV 136
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRITKKT 551
H ++++N+L+ E+L +AD+GL ++ N+ +A++ I + +PE GR T K+
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 552 DVWSLGVLILEIMT-GKFP 569
DVWS G+L+ E+ T G+ P
Sbjct: 197 DVWSFGILLTELTTKGRVP 215
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG GCFG + + + + +K K + E F + + + +LRH L+ L A
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+E +V E++ K L L G +G+ L P + + +A G+ Y+ R +
Sbjct: 84 EEPIYIVMEYMSKGCLLDFLKGE--MGK-YLRLPQLVDMAAQIASGMAYVER----MNYV 136
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRITKKT 551
H ++++N+L+ E+L +AD+GL ++ N+ +A++ I + +PE GR T K+
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 552 DVWSLGVLILEIMT-GKFP 569
DVWS G+L+ E+ T G+ P
Sbjct: 197 DVWSFGILLTELTTKGRVP 215
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 15/194 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG+G FG + A+ + + VK K ++ E F + L+H L+ L A
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKLHAVV-T 247
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
KE ++ EF+ K SL L + QP P + +A+G+ ++ E + I
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEGSKQPL---PKLIDFSAQIAEGMAFI--EQRNYI-- 300
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSPEFLQLGRITKKTDVWSL 556
H ++++N+L++ SL +AD+GL V + I + +PE + G T K+DVWS
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLARV-----GAKFPIKWTAPEAINFGSFTIKSDVWSF 355
Query: 557 GVLILEIMT-GKFP 569
G+L++EI+T G+ P
Sbjct: 356 GILLMEIVTYGRIP 369
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 110/214 (51%), Gaps = 18/214 (8%)
Query: 365 DLHDLLRASAEI---LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGR 421
D+ ++ R S ++ LG+G FG + + + + +K K + E F E + + +
Sbjct: 2 DVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKP-GTMSPESFLEEAQIMKK 60
Query: 422 LRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAK 481
L+H L+ L A +E +V E++ K SL L + +L P+ + + VA
Sbjct: 61 LKHDKLVQLYAVV-SEEPIYIVTEYMNKGSLLDFLKDGEGR---ALKLPNLVDMAAQVAA 116
Query: 482 GLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAY 536
G+ Y+ R + H ++S+N+L+ L +AD+GL ++ N+ +A++ I +
Sbjct: 117 GMAYIER----MNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKW 172
Query: 537 KSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFP 569
+PE GR T K+DVWS G+L+ E++T G+ P
Sbjct: 173 TAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 206
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGR-EEFQEHMRRLGRLRHPNLLPLVAY 433
E +G+G FG+ ++A + V +Q + R EF + + RLRHPN++ +
Sbjct: 43 EKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
+ +V E++ + SL LH A Q LD RL + VAKG+ YL+ P +
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ--LDERRRLSMAYDVAKGMNYLHNRNPPI 160
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKSPEFLQLGRIT 548
+ H ++KS N+L+++ + D+GL ++ +SA + +PE L+
Sbjct: 161 V--HRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAG-TPEWMAPEVLRDEPSN 217
Query: 549 KKTDVWSLGVLILEIMTGKFP 569
+K+DV+S GV++ E+ T + P
Sbjct: 218 EKSDVYSFGVILWELATLQQP 238
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGR-EEFQEHMRRLGRLRHPNLLPLVAY 433
E +G+G FG+ ++A + V +Q + R EF + + RLRHPN++ +
Sbjct: 43 EKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
+ +V E++ + SL LH A Q LD RL + VAKG+ YL+ P +
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ--LDERRRLSMAYDVAKGMNYLHNRNPPI 160
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRITK 549
+ H +KS N+L+++ + D+GL + A + +PE L+ +
Sbjct: 161 V--HRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNE 218
Query: 550 KTDVWSLGVLILEIMTGKFP 569
K+DV+S GV++ E+ T + P
Sbjct: 219 KSDVYSFGVILWELATLQQP 238
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 26/211 (12%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRR----LGRLRHPNLLPL 430
EI+G G FG Y+A G + VK + + + E++R+ L+HPN++ L
Sbjct: 13 EIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYREL 490
++ LV EF L L G + ++W + +A+G+ YL+ E
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ------IARGMNYLHDEA 125
Query: 491 PSLIAP--HGHIKSSNVLLNESLEP--------VLADYGLIPVMNQESAQELMIAYK--S 538
I P H +KSSN+L+ + +E + D+GL ++ + AY +
Sbjct: 126 ---IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMA 182
Query: 539 PEFLQLGRITKKTDVWSLGVLILEIMTGKFP 569
PE ++ +K +DVWS GVL+ E++TG+ P
Sbjct: 183 PEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 84/187 (44%), Gaps = 20/187 (10%)
Query: 16 NPTALANWDDRTPPCNENGANWNGVLC----HRGKIWGLKLEDMGLQGNIDITILKELRE 71
NPT L++W T CN W GVLC ++ L L + L I L
Sbjct: 20 NPTTLSSWLPTTDCCNRT---WLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIP--SSLAN 74
Query: 72 MRTLSLMR----NNLEGPMPD-LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLL 126
+ L+ + NNL GP+P + +L L +Y+++ SG IP D + +L L
Sbjct: 75 LPYLNFLYIGGINNLVGPIPPAIAKLTQ--LHYLYITHTNVSGAIP-DFLSQIKTLVTLD 131
Query: 127 LADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQ---QKDLVSFNVSNNALFGSIS 183
+ N +G +P S++ L LV + +GN+ G IPD K S +S N L G I
Sbjct: 132 FSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIP 191
Query: 184 PALRELD 190
P L+
Sbjct: 192 PTFANLN 198
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 60/142 (42%), Gaps = 30/142 (21%)
Query: 70 REMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIP----------------- 112
+ ++++ RN L G +P N L V LS N G+
Sbjct: 174 KLFTSMTISRNRLTGKIPP--TFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKN 231
Query: 113 TDAFD-GMTSLRKLL----LADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQQKD 167
+ AFD G L K L L +N+ G +P+ LT+L L L + N G+IP Q +
Sbjct: 232 SLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP--QGGN 289
Query: 168 LVSFNVS----NNALFGSISPA 185
L F+VS N L GS PA
Sbjct: 290 LQRFDVSAYANNKCLCGSPLPA 311
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 29/207 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNVGREEFQ---EHMRRLGRLRHPN 426
++LGSG FG+ +K S + +K + + GR+ FQ +HM +G L H +
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIE--DKSGRQSFQAVTDHMLAIGSLDHAH 94
Query: 427 LLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQ-ALG-QPSLDWPSRLKIVKGVAKGLQ 484
++ L+ +L V +++P SL ++ H+ ALG Q L+W + +AKG+
Sbjct: 95 IVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMY 147
Query: 485 YLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP----- 539
YL E ++ H ++ + NVLL + +AD+G+ ++ + Q L K+P
Sbjct: 148 YL--EEHGMV--HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 203
Query: 540 -EFLQLGRITKKTDVWSLGVLILEIMT 565
E + G+ T ++DVWS GV + E+MT
Sbjct: 204 LESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 106/221 (47%), Gaps = 18/221 (8%)
Query: 358 RDDVERFDLHDLLRASAEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMR 417
RD + +++ D + +GSG FG+ YK + + + F+ +
Sbjct: 25 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 84
Query: 418 RLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVK 477
L + RH N+L L Y K + +V ++ SL +LH + + + + I +
Sbjct: 85 VLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIAR 139
Query: 478 GVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM---- 533
A+G+ YL+ + S+I H +KS+N+ L+E L + D+GL V ++ S
Sbjct: 140 QTAQGMDYLHAK--SII--HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 195
Query: 534 --IAYKSPEFLQL---GRITKKTDVWSLGVLILEIMTGKFP 569
I + +PE +++ + ++DV++ G+++ E+MTG+ P
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 106/221 (47%), Gaps = 18/221 (8%)
Query: 358 RDDVERFDLHDLLRASAEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMR 417
RD + +++ D + +GSG FG+ YK + + + F+ +
Sbjct: 24 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 83
Query: 418 RLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVK 477
L + RH N+L L Y K + +V ++ SL +LH + + + + I +
Sbjct: 84 VLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIAR 138
Query: 478 GVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM---- 533
A+G+ YL+ + S+I H +KS+N+ L+E L + D+GL V ++ S
Sbjct: 139 QTAQGMDYLHAK--SII--HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 194
Query: 534 --IAYKSPEFLQL---GRITKKTDVWSLGVLILEIMTGKFP 569
I + +PE +++ + ++DV++ G+++ E+MTG+ P
Sbjct: 195 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 29/207 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNVGREEFQ---EHMRRLGRLRHPN 426
++LGSG FG+ +K S + +K + + GR+ FQ +HM +G L H +
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIE--DKSGRQSFQAVTDHMLAIGSLDHAH 76
Query: 427 LLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQ-ALG-QPSLDWPSRLKIVKGVAKGLQ 484
++ L+ +L V +++P SL ++ H+ ALG Q L+W + +AKG+
Sbjct: 77 IVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMY 129
Query: 485 YLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP----- 539
YL E ++ H ++ + NVLL + +AD+G+ ++ + Q L K+P
Sbjct: 130 YL--EEHGMV--HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 185
Query: 540 -EFLQLGRITKKTDVWSLGVLILEIMT 565
E + G+ T ++DVWS GV + E+MT
Sbjct: 186 LESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 104/221 (47%), Gaps = 18/221 (8%)
Query: 358 RDDVERFDLHDLLRASAEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMR 417
RD + +++ D + +GSG FG+ YK + + + F+ +
Sbjct: 1 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 60
Query: 418 RLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVK 477
L + RH N+L L Y K + +V ++ SL +LH + + + I +
Sbjct: 61 VLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIAR 115
Query: 478 GVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM---- 533
A+G+ YL+ + S+I H +KS+N+ L+E + D+GL V ++ S
Sbjct: 116 QTARGMDYLHAK--SII--HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLS 171
Query: 534 --IAYKSPEFLQL---GRITKKTDVWSLGVLILEIMTGKFP 569
I + +PE +++ + ++DV++ G+++ E+MTG+ P
Sbjct: 172 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
E LG+G FG + + + VK KQ ++ + F + +L+H L+ L A
Sbjct: 14 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 72
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
+E ++ E++ SL L + L L + +A+G+ ++ E +
Sbjct: 73 V-TQEPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFI--EERNY 126
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRIT 548
I H +++++N+L++++L +AD+GL ++ N+ +A+E I + +PE + G T
Sbjct: 127 I--HRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 184
Query: 549 KKTDVWSLGVLILEIMT-GKFP 569
K+DVWS G+L+ EI+T G+ P
Sbjct: 185 IKSDVWSFGILLTEIVTHGRIP 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
E LG+G FG + + + VK KQ ++ + F + +L+H L+ L A
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
+E ++ E++ SL L + L L + +A+G+ ++ E +
Sbjct: 77 V-TQEPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFI--EERNY 130
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRIT 548
I H ++++N+L++++L +AD+GL ++ N+ +A+E I + +PE + G T
Sbjct: 131 I--HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 549 KKTDVWSLGVLILEIMT-GKFP 569
K+DVWS G+L+ EI+T G+ P
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIP 210
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
E LG+G FG + + + VK KQ ++ + F + +L+H L+ L A
Sbjct: 19 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 77
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
+E ++ E++ SL L + L L + +A+G+ ++ E +
Sbjct: 78 V-TQEPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFI--EERNY 131
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRIT 548
I H ++++N+L++++L +AD+GL ++ N+ +A+E I + +PE + G T
Sbjct: 132 I--HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 189
Query: 549 KKTDVWSLGVLILEIMT-GKFP 569
K+DVWS G+L+ EI+T G+ P
Sbjct: 190 IKSDVWSFGILLTEIVTHGRIP 211
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
E LG+G FG + + + VK KQ ++ + F + +L+H L+ L A
Sbjct: 26 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 84
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
+E ++ E++ SL L + L L + +A+G+ ++ E +
Sbjct: 85 V-TQEPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFI--EERNY 138
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRIT 548
I H ++++N+L++++L +AD+GL ++ N+ +A+E I + +PE + G T
Sbjct: 139 I--HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 196
Query: 549 KKTDVWSLGVLILEIMT-GKFP 569
K+DVWS G+L+ EI+T G+ P
Sbjct: 197 IKSDVWSFGILLTEIVTHGRIP 218
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
E LG+G FG + + + VK KQ ++ + F + +L+H L+ L A
Sbjct: 13 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 71
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
+E ++ E++ SL L + L L + +A+G+ ++ E +
Sbjct: 72 V-TQEPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFI--EERNY 125
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRIT 548
I H ++++N+L++++L +AD+GL ++ N+ +A+E I + +PE + G T
Sbjct: 126 I--HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 183
Query: 549 KKTDVWSLGVLILEIMT-GKFP 569
K+DVWS G+L+ EI+T G+ P
Sbjct: 184 IKSDVWSFGILLTEIVTHGRIP 205
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVG-----REEFQEHMRRLGRLRHPNLLP 429
+++G+G FG L + + + VG R +F +G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L + + ++V E++ SL L H A + +++G+A G++YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA----QFTVIQLVGMLRGIASGMKYL--- 163
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQ-----ELMIAYKSPEFL 542
+ H + + N+L+N +L ++D+GL V+ + E+A ++ I + SPE +
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ T +DVWS G+++ E+M+
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
E LG+G FG + + + VK KQ ++ + F + +L+H L+ L A
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 82
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
+E ++ E++ SL L + L L + +A+G+ ++ E +
Sbjct: 83 V-TQEPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFI--EERNY 136
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRIT 548
I H ++++N+L++++L +AD+GL ++ N+ +A+E I + +PE + G T
Sbjct: 137 I--HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 194
Query: 549 KKTDVWSLGVLILEIMT-GKFP 569
K+DVWS G+L+ EI+T G+ P
Sbjct: 195 IKSDVWSFGILLTEIVTHGRIP 216
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
E LG+G FG + + + VK KQ ++ + F + +L+H L+ L A
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
+E ++ E++ SL L + L L + +A+G+ ++ E +
Sbjct: 77 V-TQEPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFI--EERNY 130
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRIT 548
I H ++++N+L++++L +AD+GL ++ N+ +A+E I + +PE + G T
Sbjct: 131 I--HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 549 KKTDVWSLGVLILEIMT-GKFP 569
K+DVWS G+L+ EI+T G+ P
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIP 210
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
E LG+G FG + + + VK KQ ++ + F + +L+H L+ L A
Sbjct: 27 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 85
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
+E ++ E++ SL L + L L + +A+G+ ++ E +
Sbjct: 86 V-TQEPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFI--EERNY 139
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRIT 548
I H ++++N+L++++L +AD+GL ++ N+ +A+E I + +PE + G T
Sbjct: 140 I--HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 197
Query: 549 KKTDVWSLGVLILEIMT-GKFP 569
K+DVWS G+L+ EI+T G+ P
Sbjct: 198 IKSDVWSFGILLTEIVTHGRIP 219
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
E LG+G FG + + + VK KQ ++ + F + +L+H L+ L A
Sbjct: 20 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 78
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
+E ++ E++ SL L + L L + +A+G+ ++ E +
Sbjct: 79 V-TQEPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFI--EERNY 132
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRIT 548
I H ++++N+L++++L +AD+GL ++ N+ +A+E I + +PE + G T
Sbjct: 133 I--HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 190
Query: 549 KKTDVWSLGVLILEIMT-GKFP 569
K+DVWS G+L+ EI+T G+ P
Sbjct: 191 IKSDVWSFGILLTEIVTHGRIP 212
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
E LG+G FG + + + VK KQ ++ + F + +L+H L+ L A
Sbjct: 23 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 81
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
+E ++ E++ SL L + L L + +A+G+ ++ E +
Sbjct: 82 V-TQEPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFI--EERNY 135
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRIT 548
I H ++++N+L++++L +AD+GL ++ N+ +A+E I + +PE + G T
Sbjct: 136 I--HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 193
Query: 549 KKTDVWSLGVLILEIMT-GKFP 569
K+DVWS G+L+ EI+T G+ P
Sbjct: 194 IKSDVWSFGILLTEIVTHGRIP 215
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
+GSG FG+ YK + + + + F+ + L + RH N+L + Y
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM-T 102
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
K+ +V ++ SL +LH + + + I + A+G+ YL+ + ++I
Sbjct: 103 KDNLAIVTQWCEGSSLYKHLH----VQETKFQMFQLIDIARQTAQGMDYLHAK--NII-- 154
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM------IAYKSPEFLQL---GRI 547
H +KS+N+ L+E L + D+GL V ++ S + + + + +PE +++
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 548 TKKTDVWSLGVLILEIMTGKFPANFL 573
+ ++DV+S G+++ E+MTG+ P + +
Sbjct: 215 SFQSDVYSYGIVLYELMTGELPYSHI 240
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
E LG+G FG + + + VK KQ ++ + F + +L+H L+ L A
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
+E ++ E++ SL L + L L + +A+G+ ++ E +
Sbjct: 77 V-TQEPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFI--EERNY 130
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRIT 548
I H ++++N+L++++L +AD+GL ++ N+ +A+E I + +PE + G T
Sbjct: 131 I--HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 188
Query: 549 KKTDVWSLGVLILEIMT-GKFP 569
K+DVWS G+L+ EI+T G+ P
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIP 210
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVG-----REEFQEHMRRLGRLRHPNLLP 429
+++G+G FG L + + + VG R +F +G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L + + ++V E + SL L H A + +++G+A G++YL
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA----QFTVIQLVGMLRGIASGMKYL--- 163
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQ-----ELMIAYKSPEFL 542
+ A H + + N+L+N +L ++D+GL V+ + E+A ++ I + SPE +
Sbjct: 164 -SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ T +DVWS G+++ E+M+
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
E LG+G FG + + + VK KQ ++ + F + +L+H L+ L A
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 82
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
+E ++ E++ SL L + L L + +A+G+ ++ E +
Sbjct: 83 V-TQEPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFI--EERNY 136
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRIT 548
I H ++++N+L++++L +AD+GL ++ N+ +A+E I + +PE + G T
Sbjct: 137 I--HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 194
Query: 549 KKTDVWSLGVLILEIMT-GKFP 569
K+DVWS G+L+ EI+T G+ P
Sbjct: 195 IKSDVWSFGILLTEIVTHGRIP 216
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
E LG+G FG + + + VK KQ ++ + F + +L+H L+ L A
Sbjct: 28 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 86
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
+E ++ E++ SL L + L L + +A+G+ ++ E +
Sbjct: 87 V-TQEPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFI--EERNY 140
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQE---LMIAYKSPEFLQLGRIT 548
I H ++++N+L++++L +AD+GL ++ N+ +A+E I + +PE + G T
Sbjct: 141 I--HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 198
Query: 549 KKTDVWSLGVLILEIMT-GKFP 569
K+DVWS G+L+ EI+T G+ P
Sbjct: 199 IKSDVWSFGILLTEIVTHGRIP 220
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVG-----REEFQEHMRRLGRLRHPNLLP 429
+++G+G FG L + + + VG R +F +G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L + + ++V E++ SL L H A + +++G+A G++YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA----QFTVIQLVGMLRGIASGMKYL--- 163
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQ-----ELMIAYKSPEFL 542
+ H + + N+L+N +L ++D+GL V+ + E+A ++ I + SPE +
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ T +DVWS G+++ E+M+
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 376 ILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVG-----REEFQEHMRRLGRLRHPNLLPL 430
++G+G FG L V + VG R +F +G+ HPN++ L
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYREL 490
R + ++V EF+ +L L H GQ ++ + +++G+A G++YL
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFLRKHD--GQFTV--IQLVGMLRGIAAGMRYL---- 161
Query: 491 PSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE-------SAQELMIAYKSPEFLQ 543
+ H + + N+L+N +L ++D+GL V+ + + ++ + + +PE +Q
Sbjct: 162 ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQ 221
Query: 544 LGRITKKTDVWSLGVLILEIMT 565
+ T +DVWS G+++ E+M+
Sbjct: 222 YRKFTSASDVWSYGIVMWEVMS 243
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVG-----REEFQEHMRRLGRLRHPNLLP 429
+++G+G FG L + + + VG R +F +G+ HPN++
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L + + ++V E++ SL L H A + +++G+A G++YL
Sbjct: 82 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA----QFTVIQLVGMLRGIASGMKYL--- 134
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQ-----ELMIAYKSPEFL 542
+ H + + N+L+N +L ++D+GL V+ + E+A ++ I + SPE +
Sbjct: 135 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ T +DVWS G+++ E+M+
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVG-----REEFQEHMRRLGRLRHPNLLP 429
+++G+G FG L + + + VG R +F +G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L + + ++V E++ SL L H A + +++G+A G++YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA----QFTVIQLVGMLRGIASGMKYL--- 163
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQ-----ELMIAYKSPEFL 542
+ H + + N+L+N +L ++D+GL V+ + E+A ++ I + SPE +
Sbjct: 164 -SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ T +DVWS G+++ E+M+
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVG-----REEFQEHMRRLGRLRHPNLLP 429
+++G+G FG L + + + VG R +F +G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L + + ++V E++ SL L H A + +++G+A G++YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA----QFTVIQLVGMLRGIASGMKYL--- 163
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQ-----ELMIAYKSPEFL 542
+ H + + N+L+N +L ++D+GL V+ + E+A ++ I + SPE +
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ T +DVWS G+++ E+M+
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVG-----REEFQEHMRRLGRLRHPNLLP 429
+++G+G FG L + + + VG R +F +G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L + + ++V E++ SL L H A + +++G+A G++YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA----QFTVIQLVGMLRGIASGMKYL--- 163
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQ-----ELMIAYKSPEFL 542
+ H + + N+L+N +L ++D+GL V+ + E+A ++ I + SPE +
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ T +DVWS G+++ E+M+
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVG-----REEFQEHMRRLGRLRHPNLLP 429
+++G+G FG L + + + VG R +F +G+ HPN++
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 98
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L + + ++V E++ SL L H A + +++G+A G++YL
Sbjct: 99 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA----QFTVIQLVGMLRGIASGMKYL--- 151
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQ-----ELMIAYKSPEFL 542
+ H + + N+L+N +L ++D+GL V+ + E+A ++ I + SPE +
Sbjct: 152 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 210
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ T +DVWS G+++ E+M+
Sbjct: 211 AYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 98/202 (48%), Gaps = 18/202 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
+GSG FG+ YK + + + F+ + L + RH N+L L Y
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYST 79
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
K + +V ++ SL +LH + + + + I + A+G+ YL+ + S+I
Sbjct: 80 KPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAK--SII-- 131
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM------IAYKSPEFLQL---GRI 547
H +KS+N+ L+E L + D+GL V ++ S I + +PE +++
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 548 TKKTDVWSLGVLILEIMTGKFP 569
+ ++DV++ G+++ E+MTG+ P
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLP 213
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 79/162 (48%), Gaps = 10/162 (6%)
Query: 46 KIWGLKLEDMGLQ---GNIDITILKELREMRTLSLMRNNLEGP-MPDLRQLGNGALRSVY 101
K+ GLK+ D+ G + ++ + TL L NN GP +P+L Q L+ +Y
Sbjct: 338 KMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELY 397
Query: 102 LSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIP 161
L NN F+G+IP + L L L+ N +G IP SL LS+L +L+L N EG+IP
Sbjct: 398 LQNNGFTGKIPP-TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIP 456
Query: 162 D--FQQKDLVSFNVSNNALFGSISPAL---RELDPSSFSGNR 198
K L + + N L G I L L+ S S NR
Sbjct: 457 QELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNR 498
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 62/147 (42%), Gaps = 29/147 (19%)
Query: 69 LREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRF--------------------- 107
L+ ++ LSL N G +PD L + LS N F
Sbjct: 265 LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSS 324
Query: 108 ---SGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLS-RLVELRLEGNKFEGQI-PD 162
SGE+P D M L+ L L+ N+F+G +PESLT LS L+ L L N F G I P+
Sbjct: 325 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 384
Query: 163 FQQ---KDLVSFNVSNNALFGSISPAL 186
Q L + NN G I P L
Sbjct: 385 LCQNPKNTLQELYLQNNGFTGKIPPTL 411
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Query: 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSN 104
G++ L + + G++D++ + L + NN +P L AL+ + +S
Sbjct: 175 GELKHLAISGNKISGDVDVS---RCVNLEFLDVSSNNFSTGIPFLGDCS--ALQHLDISG 229
Query: 105 NRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQ 164
N+ SG+ + A T L+ L ++ NQF GPIP L L L L NKF G+IPDF
Sbjct: 230 NKLSGDF-SRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFL 286
Query: 165 Q---KDLVSFNVSNNALFGSISP 184
L ++S N +G++ P
Sbjct: 287 SGACDTLTGLDLSGNHFYGAVPP 309
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 57 LQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEI-PTDA 115
G + + L ++R ++ L L N G +P+ + +L ++ LS+N FSG I P
Sbjct: 327 FSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLC 386
Query: 116 FDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIP 161
+ +L++L L +N F G IP +L+ S LV L L N G IP
Sbjct: 387 QNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIP 432
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Query: 66 LKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKL 125
L L ++R L L N LEG +P + L ++ L N +GEIP+ T+L +
Sbjct: 435 LGSLSKLRDLKLWLNMLEGEIPQ-ELMYVKTLETLILDFNDLTGEIPS-GLSNCTNLNWI 492
Query: 126 LLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPD--FQQKDLVSFNVSNNALFGSIS 183
L++N+ G IP+ + RL L L+L N F G IP + L+ +++ N G+I
Sbjct: 493 SLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 552
Query: 184 PAL 186
A+
Sbjct: 553 AAM 555
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 71 EMRTLSLMRNNLEGPMPDLRQLGNGA-LRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLAD 129
M L + N L G +P +++G+ L + L +N SG IP + D + L L L+
Sbjct: 630 SMMFLDMSYNMLSGYIP--KEIGSMPYLFILNLGHNDISGSIPDEVGD-LRGLNILDLSS 686
Query: 130 NQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQQ 165
N+ +G IP++++ L+ L E+ L N G IP+ Q
Sbjct: 687 NKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQ 722
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Query: 106 RFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQQ 165
R G + FD S+ L ++ N +G IP+ + + L L L N G IPD +
Sbjct: 615 RVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPD-EV 673
Query: 166 KDLVSFNV---SNNALFGSISPALREL 189
DL N+ S+N L G I A+ L
Sbjct: 674 GDLRGLNILDLSSNKLDGRIPQAMSAL 700
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 83/215 (38%), Gaps = 46/215 (21%)
Query: 20 LANWDDRTPPCNENGANWNGVLCHRGKIWGLKLE----DMGLQG---------------- 59
L +W PC ++GV C K+ + L ++G
Sbjct: 27 LPDWSSNKNPCT-----FDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFL 81
Query: 60 -----NIDITILKELREMRTLSLMRNNLEGPMPDLRQLGN-GALRSVYLSNNRFSGEIPT 113
N ++ K + +L L RN+L GP+ L LG+ L+ + +S+N + P
Sbjct: 82 SNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTL--DFPG 139
Query: 114 DAFDG--MTSLRKLLLADNQFNGP--IPESLTR-LSRLVELRLEGNKFEGQIP-----DF 163
G + SL L L+ N +G + L+ L L + GNK G + +
Sbjct: 140 KVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNL 199
Query: 164 QQKDLVSFNVSNNALFGSISPALRELDPSSFSGNR 198
+ D+ S N S F AL+ LD SGN+
Sbjct: 200 EFLDVSSNNFSTGIPFLGDCSALQHLD---ISGNK 231
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVG-----REEFQEHMRRLGRLRHPNLLP 429
+++G+G FG L + + + VG R +F +G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L + + ++V E++ SL L H A + +++G+A G++YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA----QFTVIQLVGMLRGIASGMKYL--- 163
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQ-----ELMIAYKSPEFL 542
+ H + + N+L+N +L ++D+GL V+ + E+A ++ I + SPE +
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ T +DVWS G+++ E+M+
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 79/162 (48%), Gaps = 10/162 (6%)
Query: 46 KIWGLKLEDMGLQ---GNIDITILKELREMRTLSLMRNNLEGP-MPDLRQLGNGALRSVY 101
K+ GLK+ D+ G + ++ + TL L NN GP +P+L Q L+ +Y
Sbjct: 341 KMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELY 400
Query: 102 LSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIP 161
L NN F+G+IP + L L L+ N +G IP SL LS+L +L+L N EG+IP
Sbjct: 401 LQNNGFTGKIPP-TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIP 459
Query: 162 D--FQQKDLVSFNVSNNALFGSISPALR---ELDPSSFSGNR 198
K L + + N L G I L L+ S S NR
Sbjct: 460 QELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNR 501
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 62/147 (42%), Gaps = 29/147 (19%)
Query: 69 LREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRF--------------------- 107
L+ ++ LSL N G +PD L + LS N F
Sbjct: 268 LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSS 327
Query: 108 ---SGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLS-RLVELRLEGNKFEGQI-PD 162
SGE+P D M L+ L L+ N+F+G +PESLT LS L+ L L N F G I P+
Sbjct: 328 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 387
Query: 163 FQQ---KDLVSFNVSNNALFGSISPAL 186
Q L + NN G I P L
Sbjct: 388 LCQNPKNTLQELYLQNNGFTGKIPPTL 414
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Query: 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSN 104
G++ L + + G++D++ + L + NN +P L AL+ + +S
Sbjct: 178 GELKHLAISGNKISGDVDVS---RCVNLEFLDVSSNNFSTGIPFLGDCS--ALQHLDISG 232
Query: 105 NRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQ 164
N+ SG+ + A T L+ L ++ NQF GPIP L L L L NKF G+IPDF
Sbjct: 233 NKLSGDF-SRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFL 289
Query: 165 Q---KDLVSFNVSNNALFGSISP 184
L ++S N +G++ P
Sbjct: 290 SGACDTLTGLDLSGNHFYGAVPP 312
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 57 LQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEI-PTDA 115
G + + L ++R ++ L L N G +P+ + +L ++ LS+N FSG I P
Sbjct: 330 FSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLC 389
Query: 116 FDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIP 161
+ +L++L L +N F G IP +L+ S LV L L N G IP
Sbjct: 390 QNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIP 435
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Query: 66 LKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKL 125
L L ++R L L N LEG +P + L ++ L N +GEIP+ T+L +
Sbjct: 438 LGSLSKLRDLKLWLNMLEGEIPQ-ELMYVKTLETLILDFNDLTGEIPS-GLSNCTNLNWI 495
Query: 126 LLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPD--FQQKDLVSFNVSNNALFGSIS 183
L++N+ G IP+ + RL L L+L N F G IP + L+ +++ N G+I
Sbjct: 496 SLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555
Query: 184 PAL 186
A+
Sbjct: 556 AAM 558
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 71 EMRTLSLMRNNLEGPMPDLRQLGNGA-LRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLAD 129
M L + N L G +P +++G+ L + L +N SG IP + D + L L L+
Sbjct: 633 SMMFLDMSYNMLSGYIP--KEIGSMPYLFILNLGHNDISGSIPDEVGD-LRGLNILDLSS 689
Query: 130 NQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQQ 165
N+ +G IP++++ L+ L E+ L N G IP+ Q
Sbjct: 690 NKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQ 725
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Query: 106 RFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQQ 165
R G + FD S+ L ++ N +G IP+ + + L L L N G IPD +
Sbjct: 618 RVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPD-EV 676
Query: 166 KDLVSFNV---SNNALFGSISPALREL 189
DL N+ S+N L G I A+ L
Sbjct: 677 GDLRGLNILDLSSNKLDGRIPQAMSAL 703
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 83/215 (38%), Gaps = 46/215 (21%)
Query: 20 LANWDDRTPPCNENGANWNGVLCHRGKIWGLKLE----DMGLQG---------------- 59
L +W PC ++GV C K+ + L ++G
Sbjct: 30 LPDWSSNKNPCT-----FDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFL 84
Query: 60 -----NIDITILKELREMRTLSLMRNNLEGPMPDLRQLGN-GALRSVYLSNNRFSGEIPT 113
N ++ K + +L L RN+L GP+ L LG+ L+ + +S+N + P
Sbjct: 85 SNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTL--DFPG 142
Query: 114 DAFDG--MTSLRKLLLADNQFNGP--IPESLTR-LSRLVELRLEGNKFEGQIP-----DF 163
G + SL L L+ N +G + L+ L L + GNK G + +
Sbjct: 143 KVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNL 202
Query: 164 QQKDLVSFNVSNNALFGSISPALRELDPSSFSGNR 198
+ D+ S N S F AL+ LD SGN+
Sbjct: 203 EFLDVSSNNFSTGIPFLGDCSALQHLD---ISGNK 234
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 98/202 (48%), Gaps = 18/202 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
+GSG FG+ YK + + + F+ + L + RH N+L L Y
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYST 79
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
K + +V ++ SL +LH + + + + I + A+G+ YL+ + S+I
Sbjct: 80 KPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAK--SII-- 131
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM------IAYKSPEFLQL---GRI 547
H +KS+N+ L+E L + D+GL V ++ S I + +PE +++
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 548 TKKTDVWSLGVLILEIMTGKFP 569
+ ++DV++ G+++ E+MTG+ P
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLP 213
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVG-----REEFQEHMRRLGRLRHPNLLP 429
+++G+G FG L + + + VG R +F +G+ HPN++
Sbjct: 49 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 108
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L + + ++V E++ SL L H A + +++G+A G++YL
Sbjct: 109 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA----QFTVIQLVGMLRGIASGMKYL--- 161
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQ-----ELMIAYKSPEFL 542
+ H + + N+L+N +L ++D+GL V+ + E+A ++ I + SPE +
Sbjct: 162 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 220
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ T +DVWS G+++ E+M+
Sbjct: 221 AYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVG-----REEFQEHMRRLGRLRHPNLLP 429
+++G+G FG L + + + VG R +F +G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L + + ++V E++ SL L H A + +++G+A G++YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA----QFTVIQLVGMLRGIASGMKYL--- 163
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQ-----ELMIAYKSPEFL 542
+ H + + N+L+N +L ++D+GL V+ + E+A ++ I + SPE +
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ T +DVWS G+++ E+M+
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 98/202 (48%), Gaps = 18/202 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
+GSG FG+ YK + + + F+ + L + RH N+L L Y
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYST 76
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
K + +V ++ SL +LH + + + + I + A+G+ YL+ + S+I
Sbjct: 77 KPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAK--SII-- 128
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM------IAYKSPEFLQL---GRI 547
H +KS+N+ L+E L + D+GL V ++ S I + +PE +++
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 188
Query: 548 TKKTDVWSLGVLILEIMTGKFP 569
+ ++DV++ G+++ E+MTG+ P
Sbjct: 189 SFQSDVYAFGIVLYELMTGQLP 210
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 98/202 (48%), Gaps = 18/202 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
+GSG FG+ YK + + + F+ + L + RH N+L L Y
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYST 74
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
K + +V ++ SL +LH + + + + I + A+G+ YL+ + S+I
Sbjct: 75 KPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAK--SII-- 126
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM------IAYKSPEFLQL---GRI 547
H +KS+N+ L+E L + D+GL V ++ S I + +PE +++
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 548 TKKTDVWSLGVLILEIMTGKFP 569
+ ++DV++ G+++ E+MTG+ P
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLP 208
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 358 RDDVERFDLHDLLRASAEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMR 417
RD + +++ D + +GSG FG+ YK + + + F+ +
Sbjct: 25 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 84
Query: 418 RLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVK 477
L + RH N+L L Y K + +V ++ SL +LH + + + + I +
Sbjct: 85 VLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIAR 139
Query: 478 GVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM---- 533
A+G+ YL+ + S+I H +KS+N+ L+E L + D+GL ++ S
Sbjct: 140 QTAQGMDYLHAK--SII--HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS 195
Query: 534 --IAYKSPEFLQL---GRITKKTDVWSLGVLILEIMTGKFP 569
I + +PE +++ + ++DV++ G+++ E+MTG+ P
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 358 RDDVERFDLHDLLRASAEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMR 417
RD + +++ D + +GSG FG+ YK + + + F+ +
Sbjct: 17 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 76
Query: 418 RLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVK 477
L + RH N+L L Y K + +V ++ SL +LH + + + + I +
Sbjct: 77 VLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIAR 131
Query: 478 GVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM---- 533
A+G+ YL+ + S+I H +KS+N+ L+E L + D+GL ++ S
Sbjct: 132 QTAQGMDYLHAK--SII--HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS 187
Query: 534 --IAYKSPEFLQL---GRITKKTDVWSLGVLILEIMTGKFP 569
I + +PE +++ + ++DV++ G+++ E+MTG+ P
Sbjct: 188 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 36/225 (16%)
Query: 377 LGSGCFGS-SYKASLSTGAMMVVKRFKQMNNVGREEFQEH--MRRLGRLRHPNLLPLVAY 433
LG G F L G +KR REE Q M RL HPN+L LVAY
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRL--FNHPNILRLVAY 94
Query: 434 YYR----KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
R K E L+ F + +L + + G L L ++ G+ +GL+ ++ +
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGN-FLTEDQILWLLLGICRGLEAIHAK 153
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE----------------SAQELM 533
+ H +K +N+LL + +PVL D G MNQ +AQ
Sbjct: 154 GYA----HRDLKPTNILLGDEGQPVLMDLG---SMNQACIHVEGSRQALTLQDWAAQRCT 206
Query: 534 IAYKSPEFLQLGR---ITKKTDVWSLGVLILEIMTGKFPANFLQQ 575
I+Y++PE + I ++TDVWSLG ++ +M G+ P + + Q
Sbjct: 207 ISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ 251
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 24/230 (10%)
Query: 348 KKPEIKLSFVRDDVERFDLHDLLRASAEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN 406
K P++ F +DD E+ L + +G G FG+ Y A + ++ +K+
Sbjct: 39 KDPDVAELFFKDDPEK------LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK 92
Query: 407 VGREEFQE---HMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEF-VPKRSLAVNLHGHQAL 462
E++Q+ +R L +LRHPN + Y R+ LV E+ + S + +H
Sbjct: 93 QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVH----- 147
Query: 463 GQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIP 522
+ L + G +GL YL+ ++I H +K+ N+LL+E L D+G
Sbjct: 148 -KKPLQEVEIAAVTHGALQGLAYLHSH--NMI--HRDVKAGNILLSEPGLVKLGDFGSAS 202
Query: 523 VMNQESAQELMIAYKSPEFLQL---GRITKKTDVWSLGVLILEIMTGKFP 569
+M + + +PE + G+ K DVWSLG+ +E+ K P
Sbjct: 203 IMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 252
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 358 RDDVERFDLHDLLRASAEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMR 417
RD + +++ D + +GSG FG+ YK + + + F+ +
Sbjct: 13 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 72
Query: 418 RLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVK 477
L + RH N+L L Y K + +V ++ SL +LH + + + I +
Sbjct: 73 VLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASET----KFEMKKLIDIAR 127
Query: 478 GVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM---- 533
A+G+ YL+ + S+I H +KS+N+ L+E + D+GL ++ S
Sbjct: 128 QTARGMDYLHAK--SII--HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS 183
Query: 534 --IAYKSPEFLQL---GRITKKTDVWSLGVLILEIMTGKFP 569
I + +PE +++ + ++DV++ G+++ E+MTG+ P
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL---QKLSK--FDEQRTATYITELANALSYCH----S 126
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRITKK 550
H IK N+LL + E +AD+G EL + Y PE ++ +K
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEK 186
Query: 551 TDVWSLGVLILEIMTGK--FPANFLQQGKK 578
D+WSLGVL E + GK F AN Q+ K
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 15/199 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
+GSG FG + + +K ++ + E+F E + +L HP L+ L
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+ LV EF+ L+ L + L + L + V +G+ YL E S+I
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYL--EEASVI-- 125
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM-----NQESAQELMIAYKSPEFLQLGRITKKT 551
H + + N L+ E+ ++D+G+ + + + + + SPE R + K+
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 552 DVWSLGVLILEIMT-GKFP 569
DVWS GVL+ E+ + GK P
Sbjct: 186 DVWSFGVLMWEVFSEGKIP 204
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 94/205 (45%), Gaps = 22/205 (10%)
Query: 375 EILGSGCFGSSYKASLSTGA----MMVVKRFKQ-MNNVGREEFQEHMRRLGRLRHPNLLP 429
+++G+G FG L + +K K R +F +G+ HPN++
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L + +++ EF+ SL L Q GQ ++ + +++G+A G++YL
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLR--QNDGQFTV--IQLVGMLRGIAAGMKYL--- 151
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLI---------PVMNQESAQELMIAYKSPE 540
+ H + + N+L+N +L ++D+GL P ++ I + +PE
Sbjct: 152 -ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 210
Query: 541 FLQLGRITKKTDVWSLGVLILEIMT 565
+Q + T +DVWS G+++ E+M+
Sbjct: 211 AIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVG-----REEFQEHMRRLGRLRHPNLLP 429
+++G+G FG L + + + VG R +F +G+ HPN++
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L + + ++V E + SL L H A + +++G+A G++YL
Sbjct: 82 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA----QFTVIQLVGMLRGIASGMKYL--- 134
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQ-----ELMIAYKSPEFL 542
+ H + + N+L+N +L ++D+GL V+ + E+A ++ I + SPE +
Sbjct: 135 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ T +DVWS G+++ E+M+
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P+ + L Q L + D + +A L Y + S
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKEL---QKLSK--FDEQRTATYITELANALSYCH----S 131
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRIT 548
H IK N+LL + E +AD+G ++ S++ + Y PE ++
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 189
Query: 549 KKTDVWSLGVLILEIMTGK--FPANFLQQGKK 578
+K D+WSLGVL E + GK F AN Q+ K
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 377 LGSGCFGSSYKASL-----STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL- 430
LG G FGS +TG ++ VK+ + +F+ + L L+H N++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 431 -VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
V Y + L+ EF+P SL L H+ +D L+ + KG++YL
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKE----RIDHIKLLQYTSQICKGMEYL--- 133
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQ-------ELMIAYKSPEFL 542
+ H + + N+L+ + D+GL V+ Q+ E I + +PE L
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ + +DVWS GV++ E+ T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 94/205 (45%), Gaps = 22/205 (10%)
Query: 375 EILGSGCFGSSYKASLSTGA----MMVVKRFKQ-MNNVGREEFQEHMRRLGRLRHPNLLP 429
+++G+G FG L + +K K R +F +G+ HPN++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L + +++ EF+ SL L Q GQ ++ + +++G+A G++YL
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLR--QNDGQFTV--IQLVGMLRGIAAGMKYL--- 125
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLI---------PVMNQESAQELMIAYKSPE 540
+ H + + N+L+N +L ++D+GL P ++ I + +PE
Sbjct: 126 -ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 184
Query: 541 FLQLGRITKKTDVWSLGVLILEIMT 565
+Q + T +DVWS G+++ E+M+
Sbjct: 185 AIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 102 YFHDATRVYLILEYAPLGTVYREL---QKLSK--FDEQRTATYITELANALSYCH----S 152
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRITKK 550
H IK N+LL + E +AD+G +L + Y PE ++ +K
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEK 212
Query: 551 TDVWSLGVLILEIMTGK--FPANFLQQGKK 578
D+WSLGVL E + GK F AN Q+ K
Sbjct: 213 VDLWSLGVLCYEFLVGKPPFEANTYQETYK 242
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVG-----REEFQEHMRRLGRLRHPNLLP 429
+++G+G FG L + + + VG R +F +G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L + + ++V E + SL L H A + +++G+A G++YL
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA----QFTVIQLVGMLRGIASGMKYL--- 163
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQ-----ELMIAYKSPEFL 542
+ H + + N+L+N +L ++D+GL V+ + E+A ++ I + SPE +
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ T +DVWS G+++ E+M+
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 19/211 (9%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL---QKLSK--FDEQRTATYITELANALSYCH----S 127
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM---IAYKSPEFLQLGRITK 549
H IK N+LL + E +AD+G V S ++ + + Y PE ++ +
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRDTLCGTLDYLPPEMIEGRMHDE 186
Query: 550 KTDVWSLGVLILEIMTGK--FPANFLQQGKK 578
K D+WSLGVL E + GK F AN Q+ K
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYK 217
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P+ + L Q L + D + +A L Y + S
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKEL---QKLSK--FDEQRTATYITELANALSYCH----S 131
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM---IAYKSPEFLQLGRITK 549
H IK N+LL + E +AD+G V S + + + Y PE ++ +
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRXXLXGTLDYLPPEMIEGRMHDE 190
Query: 550 KTDVWSLGVLILEIMTGK--FPANFLQQGKK 578
K D+WSLGVL E + GK F AN Q+ K
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 108/234 (46%), Gaps = 21/234 (8%)
Query: 337 SPSSTEAVVGGKKPEIKLSFVRDDVERFDLHDLLRASAEILGSGCFGSSYKASLSTGAMM 396
+P + V G P ++ + ++ER D+ LG G +G Y+ ++
Sbjct: 194 APKRNKPTVYGVSP----NYDKWEMERTDI-----TMKHKLGGGQYGEVYEGVWKKYSLT 244
Query: 397 VVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNL 456
V + + + + EEF + + ++HPNL+ L+ R+ ++ EF+ +L L
Sbjct: 245 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 304
Query: 457 HGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLA 516
+ + ++ L + ++ ++YL E + I H ++ + N L+ E+ +A
Sbjct: 305 ---RECNRQEVNAVVLLYMATQISSAMEYL--EKKNFI--HRNLAARNCLVGENHLVKVA 357
Query: 517 DYGLIPVM-----NQESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
D+GL +M + + I + +PE L + + K+DVW+ GVL+ EI T
Sbjct: 358 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
+GSG FG + + +K ++ + E+F E + +L HP L+ L
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+ LV EF+ L+ L + L + L + V +G+ YL E +I
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYL--EEACVI-- 128
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM-----NQESAQELMIAYKSPEFLQLGRITKKT 551
H + + N L+ E+ ++D+G+ + + + + + SPE R + K+
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 188
Query: 552 DVWSLGVLILEIMT-GKFP 569
DVWS GVL+ E+ + GK P
Sbjct: 189 DVWSFGVLMWEVFSEGKIP 207
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 104/214 (48%), Gaps = 21/214 (9%)
Query: 365 DLHDLLRASAEILGSGCFGSSYKASLSTGA-----MMVVKRFKQ-MNNVGREEFQEHMRR 418
++H +++G+G FG YK L T + + +K K R +F
Sbjct: 40 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI 99
Query: 419 LGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKG 478
+G+ H N++ L + + +++ E++ +L L + G+ S+ + +++G
Sbjct: 100 MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLR--EKDGEFSV--LQLVGMLRG 155
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE-------SAQE 531
+A G++YL ++ H + + N+L+N +L ++D+GL V+ + S +
Sbjct: 156 IAAGMKYL----ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGK 211
Query: 532 LMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ I + +PE + + T +DVWS G+++ E+MT
Sbjct: 212 IPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 93 YFHDATRVYLILEYAPLGTVYREL---QKLSK--FDEQRTATYITELANALSYCH----S 143
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRIT 548
H IK N+LL + E +AD+G ++ S++ + Y PE ++
Sbjct: 144 KRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 201
Query: 549 KKTDVWSLGVLILEIMTGK--FPANFLQQGKK 578
+K D+WSLGVL E + GK F AN Q+ K
Sbjct: 202 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 233
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 108/234 (46%), Gaps = 21/234 (8%)
Query: 337 SPSSTEAVVGGKKPEIKLSFVRDDVERFDLHDLLRASAEILGSGCFGSSYKASLSTGAMM 396
+P + V G P ++ + ++ER D+ LG G +G Y+ ++
Sbjct: 236 APKRNKPTVYGVSP----NYDKWEMERTDI-----TMKHKLGGGQYGEVYEGVWKKYSLT 286
Query: 397 VVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNL 456
V + + + + EEF + + ++HPNL+ L+ R+ ++ EF+ +L L
Sbjct: 287 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 346
Query: 457 HGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLA 516
+ + ++ L + ++ ++YL E + I H ++ + N L+ E+ +A
Sbjct: 347 ---RECNRQEVNAVVLLYMATQISSAMEYL--EKKNFI--HRNLAARNCLVGENHLVKVA 399
Query: 517 DYGLIPVM-----NQESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
D+GL +M + + I + +PE L + + K+DVW+ GVL+ EI T
Sbjct: 400 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL---QKLSK--FDEQRTATYITELANALSYCH----S 127
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRITKK 550
H IK N+LL + E +AD+G +L + Y PE ++ +K
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 187
Query: 551 TDVWSLGVLILEIMTGK--FPANFLQQGKK 578
D+WSLGVL E + GK F AN Q+ K
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEANTYQETYK 217
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 19/219 (8%)
Query: 361 VERFDLHDLLRAS----AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHM 416
V R LH ++ S + +GSG FG + + +K K+ ++ ++F E
Sbjct: 15 VPRGSLHMVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKE-GSMSEDDFIEEA 73
Query: 417 RRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIV 476
+ +L HP L+ L + LV EF+ L+ L + L + L +
Sbjct: 74 EVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE----TLLGMC 129
Query: 477 KGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM-----NQESAQE 531
V +G+ YL E +I H + + N L+ E+ ++D+G+ + + +
Sbjct: 130 LDVCEGMAYL--EEACVI--HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 185
Query: 532 LMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFP 569
+ + SPE R + K+DVWS GVL+ E+ + GK P
Sbjct: 186 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 224
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
+GSG FG+ YK + + + F+ + L + RH N+L L Y
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYST 74
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+ +V ++ SL +LH + + + + I + A+G+ YL+ + S+I
Sbjct: 75 APQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAK--SII-- 126
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM------IAYKSPEFLQL---GRI 547
H +KS+N+ L+E L + D+GL V ++ S I + +PE +++
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 548 TKKTDVWSLGVLILEIMTGKFP 569
+ ++DV++ G+++ E+MTG+ P
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLP 208
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
+GSG FG + + +K ++ + E+F E + +L HP L+ L
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+ LV EF+ L+ L + L + L + V +G+ YL E +I
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYL--EEACVI-- 125
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM-----NQESAQELMIAYKSPEFLQLGRITKKT 551
H + + N L+ E+ ++D+G+ + + + + + SPE R + K+
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 552 DVWSLGVLILEIMT-GKFP 569
DVWS GVL+ E+ + GK P
Sbjct: 186 DVWSFGVLMWEVFSEGKIP 204
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 17/210 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL---QKLSK--FDEQRTATYITELANALSYCH----S 129
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYG--LIPVMNQESAQELMIAYKSPEFLQLGRITKK 550
H IK N+LL + E +AD+G + ++ +A + Y PE ++ +K
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 189
Query: 551 TDVWSLGVLILEIMTGK--FPANFLQQGKK 578
D+WSLGVL E + GK F AN Q+ K
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL---QKLSK--FDEQRTATYITELANALSYCH----S 126
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRITKK 550
H IK N+LL + E +AD+G +L + Y PE ++ +K
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 186
Query: 551 TDVWSLGVLILEIMTGK--FPANFLQQGKK 578
D+WSLGVL E + GK F AN Q+ K
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL---QKLSK--FDEQRTATYITELANALSYCH----S 131
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRITKK 550
H IK N+LL + E +AD+G +L + Y PE ++ +K
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 191
Query: 551 TDVWSLGVLILEIMTGK--FPANFLQQGKK 578
D+WSLGVL E + GK F AN Q+ K
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 40/216 (18%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
E +G G +G YKA S G ++ +KR + + + +E + L L HPN++ L+
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIRE-ISLLKELHHPNIVSLI 85
Query: 432 AYYYRKEEKLLVHEFVPK---RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYR 488
+ + LV EF+ K + L N G Q S++KI YLY+
Sbjct: 86 DVIHSERCLTLVFEFMEKDLKKVLDENKTGLQD---------SQIKI---------YLYQ 127
Query: 489 ELPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYK 537
L + H H +K N+L+N LAD+GL IPV + + + + + Y+
Sbjct: 128 LLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY-THEVVTLWYR 186
Query: 538 SPEFLQ-LGRITKKTDVWSLGVLILEIMTGK--FPA 570
+P+ L + + D+WS+G + E++TGK FP
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPG 222
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 102 YFHDATRVYLILEYAPLGTVYREL---QKLSK--FDEQRTATYITELANALSYCH----S 152
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRIT 548
H IK N+LL + E +AD+G ++ S++ + Y PE ++
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 210
Query: 549 KKTDVWSLGVLILEIMTGK--FPANFLQQGKK 578
+K D+WSLGVL E + GK F AN Q+ K
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 242
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 106/240 (44%), Gaps = 46/240 (19%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEF--QEHMRRLGRLRHPNLLPLVA 432
E++G G +G+ YK SL + VK F N R+ F ++++ R+ + H N+ +
Sbjct: 19 ELIGRGRYGAVYKGSLDERPV-AVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 433 YYYR-----KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
R + E LLV E+ P SL L H + DW S ++ V +GL YL+
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS------DWVSSCRLAHSVTRGLAYLH 128
Query: 488 RELP-----SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM------------NQESAQ 530
ELP H + S NVL+ V++D+GL + N ++
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188
Query: 531 ELMIAYKSPEFLQLGRIT--------KKTDVWSLGVLILEIM---TGKFPANFLQQGKKA 579
I Y +PE L+ G + K+ D+++LG++ EI T FP + + + A
Sbjct: 189 VGTIRYMAPEVLE-GAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMA 247
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
+GSG FG + + +K ++ + E+F E + +L HP L+ L
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+ LV EF+ L+ L + L + L + V +G+ YL E +I
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYL--EEACVI-- 123
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM-----NQESAQELMIAYKSPEFLQLGRITKKT 551
H + + N L+ E+ ++D+G+ + + + + + SPE R + K+
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 183
Query: 552 DVWSLGVLILEIMT-GKFP 569
DVWS GVL+ E+ + GK P
Sbjct: 184 DVWSFGVLMWEVFSEGKIP 202
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL---QKLSK--FDEQRTATYITELANALSYCH----S 126
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRITKK 550
H IK N+LL + E +AD+G +L + Y PE ++ +K
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 186
Query: 551 TDVWSLGVLILEIMTGK--FPANFLQQGKK 578
D+WSLGVL E + GK F AN Q+ K
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 40/216 (18%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
E +G G +G YKA S G ++ +KR + + + +E + L L HPN++ L+
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIRE-ISLLKELHHPNIVSLI 85
Query: 432 AYYYRKEEKLLVHEFVPK---RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYR 488
+ + LV EF+ K + L N G Q S++KI YLY+
Sbjct: 86 DVIHSERCLTLVFEFMEKDLKKVLDENKTGLQD---------SQIKI---------YLYQ 127
Query: 489 ELPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYK 537
L + H H +K N+L+N LAD+GL IPV + + + + + Y+
Sbjct: 128 LLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY-THEVVTLWYR 186
Query: 538 SPEFLQ-LGRITKKTDVWSLGVLILEIMTGK--FPA 570
+P+ L + + D+WS+G + E++TGK FP
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPG 222
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL---QKLSK--FDEQRTATYITELANALSYCH----S 126
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRIT 548
H IK N+LL + E +AD+G ++ S++ + Y PE ++
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 184
Query: 549 KKTDVWSLGVLILEIMTGK--FPANFLQQGKK 578
+K D+WSLGVL E + GK F AN Q+ K
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
+GSG FG + + +K ++ + E+F E + +L HP L+ L
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+ LV EF+ L+ L + L + L + V +G+ YL E +I
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYL--EEACVI-- 126
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM-----NQESAQELMIAYKSPEFLQLGRITKKT 551
H + + N L+ E+ ++D+G+ + + + + + SPE R + K+
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 186
Query: 552 DVWSLGVLILEIMT-GKFP 569
DVWS GVL+ E+ + GK P
Sbjct: 187 DVWSFGVLMWEVFSEGKIP 205
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL---QKLSK--FDEQRTATYITELANALSYCH----S 129
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRITKK 550
H IK N+LL + E +AD+G +L + Y PE ++ +K
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEK 189
Query: 551 TDVWSLGVLILEIMTGK--FPANFLQQGKK 578
D+WSLGVL E + GK F AN Q+ K
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL---QKLSK--FDEQRTATYITELANALSYCH----S 131
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRIT 548
H IK N+LL + E +AD+G ++ S++ + Y PE ++
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEXIEGRXHD 189
Query: 549 KKTDVWSLGVLILEIMTGK--FPANFLQQGKK 578
+K D+WSLGVL E + GK F AN Q+ K
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL---QKLSK--FDEQRTATYITELANALSYCH----S 129
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRIT 548
H IK N+LL + E +AD+G ++ S++ + Y PE ++
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 187
Query: 549 KKTDVWSLGVLILEIMTGK--FPANFLQQGKK 578
+K D+WSLGVL E + GK F AN Q+ K
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 16/196 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG G FG Y+ ++ V + + + + EEF + + ++HPNL+ L+ R
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 437 KEEKLLVHEFVPKRSLAVNLH--GHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLI 494
+ ++ EF+ +L L Q + L L + ++ ++YL E + I
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYL--EKKNFI 131
Query: 495 APHGHIKSSNVLLNESLEPVLADYGLIPVM-----NQESAQELMIAYKSPEFLQLGRITK 549
H + + N L+ E+ +AD+GL +M + + I + +PE L + +
Sbjct: 132 --HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 550 KTDVWSLGVLILEIMT 565
K+DVW+ GVL+ EI T
Sbjct: 190 KSDVWAFGVLLWEIAT 205
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL---QKLSK--FDEQRTATYITELANALSYCH----S 131
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRIT 548
H IK N+LL + E +AD+G ++ S++ + Y PE ++
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 189
Query: 549 KKTDVWSLGVLILEIMTGK--FPANFLQQGKK 578
+K D+WSLGVL E + GK F AN Q+ K
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 377 LGSGCFGSSYKASL-----STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL- 430
LG G FGS +TG ++ VK+ + +F+ + L L+H N++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 431 -VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
V Y + L+ E++P SL L H+ +D L+ + KG++YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYL--- 133
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQ-------ELMIAYKSPEFL 542
+ H + + N+L+ + D+GL V+ Q+ E I + +PE L
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ + +DVWS GV++ E+ T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 22/203 (10%)
Query: 377 LGSGCFGSSYKASL-----STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL- 430
LG G FGS +TG ++ VK+ + +F+ + L L+H N++
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 431 -VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
V Y + L+ E++P SL L H+ +D L+ + KG++YL
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYL--- 131
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQ-------ELMIAYKSPEFL 542
+ H ++ + N+L+ + D+GL V+ Q+ E I + +PE L
Sbjct: 132 -GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESL 190
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ + +DVWS GV++ E+ T
Sbjct: 191 TESKFSVASDVWSFGVVLYELFT 213
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 377 LGSGCFGSSYKASL-----STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL- 430
LG G FGS +TG ++ VK+ + +F+ + L L+H N++
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 431 -VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
V Y + L+ E++P SL L H+ +D L+ + KG++YL
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYL--- 135
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQ-------ELMIAYKSPEFL 542
+ H + + N+L+ + D+GL V+ Q+ E I + +PE L
Sbjct: 136 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 194
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ + +DVWS GV++ E+ T
Sbjct: 195 TESKFSVASDVWSFGVVLYELFT 217
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 102/221 (46%), Gaps = 18/221 (8%)
Query: 358 RDDVERFDLHDLLRASAEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMR 417
RD + +++ D + +GSG FG+ YK + + + F+ +
Sbjct: 13 RDAADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 72
Query: 418 RLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVK 477
L + RH N+L L Y + +V ++ SL +LH + + + I +
Sbjct: 73 VLRKTRHVNIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIAR 127
Query: 478 GVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM---- 533
A+G+ YL+ + S+I H +KS+N+ L+E + D+GL ++ S
Sbjct: 128 QTARGMDYLHAK--SII--HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS 183
Query: 534 --IAYKSPEFLQL---GRITKKTDVWSLGVLILEIMTGKFP 569
I + +PE +++ + ++DV++ G+++ E+MTG+ P
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 78 YFHDATRVYLILEYAPLGTVYREL---QKLSK--FDEQRTATYITELANALSYCH----S 128
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRIT 548
H IK N+LL + E +AD+G ++ S++ + Y PE ++
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRXXLCGTLDYLPPEMIEGRMHD 186
Query: 549 KKTDVWSLGVLILEIMTGK--FPANFLQQGKK 578
+K D+WSLGVL E + GK F AN Q+ K
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 218
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 377 LGSGCFGSSYKASL-----STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL- 430
LG G FGS +TG ++ VK+ + +F+ + L L+H N++
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 431 -VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
V Y + L+ E++P SL L H+ +D L+ + KG++YL
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYL--- 137
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQ-------ELMIAYKSPEFL 542
+ H + + N+L+ + D+GL V+ Q+ E I + +PE L
Sbjct: 138 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 196
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ + +DVWS GV++ E+ T
Sbjct: 197 TESKFSVASDVWSFGVVLYELFT 219
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
+GSG FG+ YK + + + F+ + L + RH N+L L Y
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYST 74
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
K + +V ++ SL +LH + + + + I + A+G+ YL+ + S+I
Sbjct: 75 KPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAK--SII-- 126
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM------IAYKSPEFLQL---GRI 547
H +KS+N+ L+E L + D+GL ++ S I + +PE +++
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 548 TKKTDVWSLGVLILEIMTGKFP 569
+ ++DV++ G+++ E+MTG+ P
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLP 208
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 377 LGSGCFGSSYKASL-----STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL- 430
LG G FGS +TG ++ VK+ + +F+ + L L+H N++
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 431 -VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
V Y + L+ E++P SL L H+ +D L+ + KG++YL
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYL--- 136
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQ-------ELMIAYKSPEFL 542
+ H + + N+L+ + D+GL V+ Q+ E I + +PE L
Sbjct: 137 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 195
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ + +DVWS GV++ E+ T
Sbjct: 196 TESKFSVASDVWSFGVVLYELFT 218
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 22/203 (10%)
Query: 377 LGSGCFGSSYKASL-----STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL- 430
LG G FGS +TG ++ VK+ + +F+ + L L+H N++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 431 -VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
V Y + L+ E++P SL L H +D L+ + KG++YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAE----RIDHIKLLQYTSQICKGMEYL--- 133
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQ-------ELMIAYKSPEFL 542
+ H + + N+L+ + D+GL V+ Q+ E I + +PE L
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ + +DVWS GV++ E+ T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 102/228 (44%), Gaps = 24/228 (10%)
Query: 350 PEIKLSFVRDDVERFDLHDLLRASAEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVG 408
P++ F +DD E+ L + +G G FG+ Y A + ++ +K+
Sbjct: 2 PDVAELFFKDDPEK------LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS 55
Query: 409 REEFQE---HMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEF-VPKRSLAVNLHGHQALGQ 464
E++Q+ +R L +LRHPN + Y R+ LV E+ + S + +H +
Sbjct: 56 NEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVH------K 109
Query: 465 PSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM 524
L + G +GL YL+ ++I H +K+ N+LL+E L D+G +M
Sbjct: 110 KPLQEVEIAAVTHGALQGLAYLHSH--NMI--HRDVKAGNILLSEPGLVKLGDFGSASIM 165
Query: 525 NQESAQELMIAYKSPEFLQL---GRITKKTDVWSLGVLILEIMTGKFP 569
+ + +PE + G+ K DVWSLG+ +E+ K P
Sbjct: 166 APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 213
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL---QKLSK--FDEQRTATYITELANALSYCH----S 130
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRIT 548
H IK N+LL + E +AD+G ++ S++ + Y PE ++
Sbjct: 131 KRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 188
Query: 549 KKTDVWSLGVLILEIMTGK--FPANFLQQGKK 578
+K D+WSLGVL E + GK F AN Q+ K
Sbjct: 189 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 220
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 107/234 (45%), Gaps = 21/234 (8%)
Query: 337 SPSSTEAVVGGKKPEIKLSFVRDDVERFDLHDLLRASAEILGSGCFGSSYKASLSTGAMM 396
+P + + G P ++ + ++ER D+ LG G +G Y+ ++
Sbjct: 197 APKRNKPTIYGVSP----NYDKWEMERTDI-----TMKHKLGGGQYGEVYEGVWKKYSLT 247
Query: 397 VVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNL 456
V + + + + EEF + + ++HPNL+ L+ R+ ++ EF+ +L L
Sbjct: 248 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 307
Query: 457 HGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLA 516
+ + + L + ++ ++YL E + I H ++ + N L+ E+ +A
Sbjct: 308 ---RECNRQEVSAVVLLYMATQISSAMEYL--EKKNFI--HRNLAARNCLVGENHLVKVA 360
Query: 517 DYGLIPVM-----NQESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
D+GL +M + + I + +PE L + + K+DVW+ GVL+ EI T
Sbjct: 361 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL---QKLSK--FDEQRTATYITELANALSYCH----S 127
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRIT 548
H IK N+LL + E +AD+G + S++ ++ Y PE ++
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGW--SCHAPSSRRTTLSGTLDYLPPEMIEGRMHD 185
Query: 549 KKTDVWSLGVLILEIMTGK--FPANFLQQGKK 578
+K D+WSLGVL E + GK F AN Q+ K
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 217
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL---QKLSK--FDEQRTATYITELANALSYCH----S 126
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYG--LIPVMNQESAQELMIAYKSPEFLQLGRIT-K 549
H IK N+LL + E +AD+G + ++ +A + Y PE ++ GR+ +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIE-GRMHDE 185
Query: 550 KTDVWSLGVLILEIMTGK--FPANFLQQGKK 578
K D+WSLGVL E + GK F AN Q+ K
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 377 LGSGCFGSSYKASL-----STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL- 430
LG G FGS +TG ++ VK+ + +F+ + L L+H N++
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 431 -VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
V Y + L+ E++P SL L H+ +D L+ + KG++YL
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYL--- 161
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQ-------ELMIAYKSPEFL 542
+ H + + N+L+ + D+GL V+ Q+ E I + +PE L
Sbjct: 162 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 220
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ + +DVWS GV++ E+ T
Sbjct: 221 TESKFSVASDVWSFGVVLYELFT 243
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 377 LGSGCFGSSYKASL-----STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL- 430
LG G FGS +TG ++ VK+ + +F+ + L L+H N++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 431 -VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
V Y + L+ E++P SL L H+ +D L+ + KG++YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYL--- 130
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQ-------ELMIAYKSPEFL 542
+ H + + N+L+ + D+GL V+ Q+ E I + +PE L
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ + +DVWS GV++ E+ T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 377 LGSGCFGSSYKASL-----STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL- 430
LG G FGS +TG ++ VK+ + +F+ + L L+H N++
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 431 -VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
V Y + L+ E++P SL L H+ +D L+ + KG++YL
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYL--- 134
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQ-------ELMIAYKSPEFL 542
+ H + + N+L+ + D+GL V+ Q+ E I + +PE L
Sbjct: 135 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 193
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ + +DVWS GV++ E+ T
Sbjct: 194 TESKFSVASDVWSFGVVLYELFT 216
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 377 LGSGCFGSSYKASL-----STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL- 430
LG G FGS +TG ++ VK+ + +F+ + L L+H N++
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 431 -VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
V Y + L+ E++P SL L H+ +D L+ + KG++YL
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYL--- 129
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQ-------ELMIAYKSPEFL 542
+ H + + N+L+ + D+GL V+ Q+ E I + +PE L
Sbjct: 130 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 188
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ + +DVWS GV++ E+ T
Sbjct: 189 TESKFSVASDVWSFGVVLYELFT 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 377 LGSGCFGSSYKASL-----STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL- 430
LG G FGS +TG ++ VK+ + +F+ + L L+H N++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 431 -VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
V Y + L+ E++P SL L H+ +D L+ + KG++YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYL--- 130
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQ-------ELMIAYKSPEFL 542
+ H + + N+L+ + D+GL V+ Q+ E I + +PE L
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ + +DVWS GV++ E+ T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 75 YFHDATRVYLILEYAPLGTVYREL---QKLSK--FDEQRTATYITELANALSYCH----S 125
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRIT 548
H IK N+LL + E +AD+G ++ S++ + Y PE ++
Sbjct: 126 KRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 183
Query: 549 KKTDVWSLGVLILEIMTGK--FPANFLQQGKK 578
+K D+WSLGVL E + GK F AN Q+ K
Sbjct: 184 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 215
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYREL---QKLSK--FDEQRTATYITELANALSYCH----S 126
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYG--LIPVMNQESAQELMIAYKSPEFLQLGRITKK 550
H IK N+LL + E +AD+G + ++ +A + Y PE ++ +K
Sbjct: 127 KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 186
Query: 551 TDVWSLGVLILEIMTGK--FPANFLQQGKK 578
D+WSLGVL E + GK F AN Q K
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQDTYK 216
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL---QKLSK--FDEQRTATYITELANALSYCH----S 126
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRIT 548
H IK N+LL + E +AD+G ++ S++ + Y PE ++
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTXLCGTLDYLPPEMIEGRMHD 184
Query: 549 KKTDVWSLGVLILEIMTGK--FPANFLQQGKK 578
+K D+WSLGVL E + GK F AN Q+ K
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 377 LGSGCFGSSYKASL-----STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL- 430
LG G FGS +TG ++ VK+ + +F+ + L L+H N++
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 431 -VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
V Y + L+ E++P SL L H+ +D L+ + KG++YL
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYL--- 128
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQ-------ELMIAYKSPEFL 542
+ H + + N+L+ + D+GL V+ Q+ E I + +PE L
Sbjct: 129 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 187
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ + +DVWS GV++ E+ T
Sbjct: 188 TESKFSVASDVWSFGVVLYELFT 210
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL---QKLSK--FDEQRTATYITELANALSYCH----S 129
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRIT 548
H IK N+LL + E +AD+G ++ S++ + Y PE ++ GR+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIE-GRMH 186
Query: 549 -KKTDVWSLGVLILEIMTGK--FPANFLQQGKK 578
+K D+WSLGVL E + GK F AN Q+ K
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL---QKLSK--FDEQRTATYITELANALSYCH----S 126
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRIT 548
H IK N+LL + E +AD+G ++ S++ + Y PE ++
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRXXLCGTLDYLPPEMIEGRMHD 184
Query: 549 KKTDVWSLGVLILEIMTGK--FPANFLQQGKK 578
+K D+WSLGVL E + GK F AN Q+ K
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL---QKLSK--FDEQRTATYITELANALSYCH----S 129
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRIT 548
H IK N+LL + E +AD+G ++ S++ + Y PE ++ GR+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRXXLCGTLDYLPPEMIE-GRMH 186
Query: 549 -KKTDVWSLGVLILEIMTGK--FPANFLQQGKK 578
+K D+WSLGVL E + GK F AN Q+ K
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 377 LGSGCFGSSYKASL-----STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL- 430
LG G FGS +TG ++ VK+ + +F+ + L L+H N++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 431 -VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
V Y + L+ E++P SL L H+ +D L+ + KG++YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYL--- 148
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQ-------ELMIAYKSPEFL 542
+ H + + N+L+ + D+GL V+ Q+ E I + +PE L
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ + +DVWS GV++ E+ T
Sbjct: 208 TESKFSVASDVWSFGVVLYELFT 230
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 104/249 (41%), Gaps = 54/249 (21%)
Query: 347 GKKPEIKLSFVRDDVERFDLHDLLRASAEILGSGCFGSSYKASL-------STGAMMVVK 399
GK EI LS VR E LG FG YK L T A+ +
Sbjct: 1 GKLKEISLSAVR--------------FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKT 46
Query: 400 RFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLV---------HEFVPKR 450
+ REEF+ RL+HPN++ L+ + + ++ HEF+ R
Sbjct: 47 LKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMR 106
Query: 451 SLAVNLHGHQALG--------QPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKS 502
S H +G + +L+ P + +V +A G++YL S H + +
Sbjct: 107 S------PHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL----SSHHVVHKDLAT 156
Query: 503 SNVLLNESLEPVLADYGLIPVMNQESAQELM------IAYKSPEFLQLGRITKKTDVWSL 556
NVL+ + L ++D GL + +L+ I + +PE + G+ + +D+WS
Sbjct: 157 RNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSY 216
Query: 557 GVLILEIMT 565
GV++ E+ +
Sbjct: 217 GVVLWEVFS 225
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 92/194 (47%), Gaps = 12/194 (6%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG G +G Y+ ++ V + + + + EEF + + ++HPNL+ L+ R
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+ ++ EF+ +L L + + ++ L + ++ ++YL E + I
Sbjct: 83 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYL--EKKNFI-- 135
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM-----NQESAQELMIAYKSPEFLQLGRITKKT 551
H + + N L+ E+ +AD+GL +M + + I + +PE L + + K+
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 552 DVWSLGVLILEIMT 565
DVW+ GVL+ EI T
Sbjct: 196 DVWAFGVLLWEIAT 209
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 92/194 (47%), Gaps = 12/194 (6%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG G +G Y+ ++ V + + + + EEF + + ++HPNL+ L+ R
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+ ++ EF+ +L L + + ++ L + ++ ++YL E + I
Sbjct: 86 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYL--EKKNFI-- 138
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM-----NQESAQELMIAYKSPEFLQLGRITKKT 551
H + + N L+ E+ +AD+GL +M + + I + +PE L + + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 552 DVWSLGVLILEIMT 565
DVW+ GVL+ EI T
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 377 LGSGCFGSSYKASL-----STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL- 430
LG G FGS +TG ++ VK+ + +F+ + L L+H N++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 431 -VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
V Y + L+ E++P SL L H+ +D L+ + KG++YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYL--- 148
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQ-------ELMIAYKSPEFL 542
+ H + + N+L+ + D+GL V+ Q+ E I + +PE L
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ + +DVWS GV++ E+ T
Sbjct: 208 TESKFSVASDVWSFGVVLYELFT 230
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 92/194 (47%), Gaps = 12/194 (6%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG G +G Y+ ++ V + + + + EEF + + ++HPNL+ L+ R
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+ ++ EF+ +L L + + ++ L + ++ ++YL E + I
Sbjct: 86 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYL--EKKNFI-- 138
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM-----NQESAQELMIAYKSPEFLQLGRITKKT 551
H + + N L+ E+ +AD+GL +M + + I + +PE L + + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 552 DVWSLGVLILEIMT 565
DVW+ GVL+ EI T
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 16/196 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG G +G Y+ ++ V + + + + EEF + + ++HPNL+ L+ R
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 437 KEEKLLVHEFVPKRSLAVNLH--GHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLI 494
+ ++ EF+ +L L Q + L L + ++ ++YL E + I
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYL--EKKNFI 138
Query: 495 APHGHIKSSNVLLNESLEPVLADYGLIPVM-----NQESAQELMIAYKSPEFLQLGRITK 549
H + + N L+ E+ +AD+GL +M + + I + +PE L + +
Sbjct: 139 --HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 550 KTDVWSLGVLILEIMT 565
K+DVW+ GVL+ EI T
Sbjct: 197 KSDVWAFGVLLWEIAT 212
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 93/194 (47%), Gaps = 12/194 (6%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG G +G Y+ ++ V + + + + EEF + + ++HPNL+ L+ R
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+ ++ EF+ +L L + + ++ L + ++ ++YL E + I
Sbjct: 82 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYL--EKKNFI-- 134
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVMNQES-----AQELMIAYKSPEFLQLGRITKKT 551
H + + N L+ E+ +AD+GL +M ++ + I + +PE L + + K+
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 552 DVWSLGVLILEIMT 565
DVW+ GVL+ EI T
Sbjct: 195 DVWAFGVLLWEIAT 208
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 92/194 (47%), Gaps = 12/194 (6%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG G +G Y+ ++ V + + + + EEF + + ++HPNL+ L+ R
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+ ++ EF+ +L L + + ++ L + ++ ++YL E + I
Sbjct: 94 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYL--EKKNFI-- 146
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM-----NQESAQELMIAYKSPEFLQLGRITKKT 551
H + + N L+ E+ +AD+GL +M + + I + +PE L + + K+
Sbjct: 147 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 206
Query: 552 DVWSLGVLILEIMT 565
DVW+ GVL+ EI T
Sbjct: 207 DVWAFGVLLWEIAT 220
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 92/194 (47%), Gaps = 12/194 (6%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG G +G Y+ ++ V + + + + EEF + + ++HPNL+ L+ R
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+ ++ EF+ +L L + + ++ L + ++ ++YL E + I
Sbjct: 83 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYL--EKKNFI-- 135
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM-----NQESAQELMIAYKSPEFLQLGRITKKT 551
H + + N L+ E+ +AD+GL +M + + I + +PE L + + K+
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 552 DVWSLGVLILEIMT 565
DVW+ GVL+ EI T
Sbjct: 196 DVWAFGVLLWEIAT 209
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 16/196 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG G +G Y+ ++ V + + + + EEF + + ++HPNL+ L+ R
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 437 KEEKLLVHEFVPKRSLAVNLH--GHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLI 494
+ ++ EF+ +L L Q + L L + ++ ++YL E + I
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYL--EKKNFI 131
Query: 495 APHGHIKSSNVLLNESLEPVLADYGLIPVM-----NQESAQELMIAYKSPEFLQLGRITK 549
H + + N L+ E+ +AD+GL +M + + I + +PE L + +
Sbjct: 132 --HRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 550 KTDVWSLGVLILEIMT 565
K+DVW+ GVL+ EI T
Sbjct: 190 KSDVWAFGVLLWEIAT 205
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 377 LGSGCFGSSYKASL-----STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL- 430
LG G FGS +TG ++ VK+ + +F+ + L L+H N++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 431 -VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
V Y + L+ E++P SL L H+ +D L+ + KG++YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYL--- 130
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES-------AQELMIAYKSPEFL 542
+ H + + N+L+ + D+GL V+ Q+ E I + +PE L
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL 189
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ + +DVWS GV++ E+ T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 93/194 (47%), Gaps = 12/194 (6%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG G +G Y+ ++ V + + + + EEF + + ++HPNL+ L+ R
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+ ++ EF+ +L L + + ++ L + ++ ++YL E + I
Sbjct: 83 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYL--EKKNFI-- 135
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVMNQES-----AQELMIAYKSPEFLQLGRITKKT 551
H + + N L+ E+ +AD+GL +M ++ + I + +PE L + + K+
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 552 DVWSLGVLILEIMT 565
DVW+ GVL+ EI T
Sbjct: 196 DVWAFGVLLWEIAT 209
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 92/194 (47%), Gaps = 12/194 (6%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG G +G Y+ ++ V + + + + EEF + + ++HPNL+ L+ R
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+ ++ EF+ +L L + + ++ L + ++ ++YL E + I
Sbjct: 86 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYL--EKKNFI-- 138
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM-----NQESAQELMIAYKSPEFLQLGRITKKT 551
H + + N L+ E+ +AD+GL +M + + I + +PE L + + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 552 DVWSLGVLILEIMT 565
DVW+ GVL+ EI T
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 92/194 (47%), Gaps = 12/194 (6%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG G +G Y+ ++ V + + + + EEF + + ++HPNL+ L+ R
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+ ++ EF+ +L L + + ++ L + ++ ++YL E + I
Sbjct: 85 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYL--EKKNFI-- 137
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM-----NQESAQELMIAYKSPEFLQLGRITKKT 551
H + + N L+ E+ +AD+GL +M + + I + +PE L + + K+
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 197
Query: 552 DVWSLGVLILEIMT 565
DVW+ GVL+ EI T
Sbjct: 198 DVWAFGVLLWEIAT 211
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 16/196 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG G +G Y+ ++ V + + + + EEF + + ++HPNL+ L+ R
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 437 KEEKLLVHEFVPKRSLAVNLH--GHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLI 494
+ ++ EF+ +L L Q + L L + ++ ++YL E + I
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYL--EKKNFI 133
Query: 495 APHGHIKSSNVLLNESLEPVLADYGLIPVM-----NQESAQELMIAYKSPEFLQLGRITK 549
H + + N L+ E+ +AD+GL +M + + I + +PE L + +
Sbjct: 134 --HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 550 KTDVWSLGVLILEIMT 565
K+DVW+ GVL+ EI T
Sbjct: 192 KSDVWAFGVLLWEIAT 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 16/196 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG G +G Y+ ++ V + + + + EEF + + ++HPNL+ L+ R
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 437 KEEKLLVHEFVPKRSLAVNLH--GHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLI 494
+ ++ EF+ +L L Q + L L + ++ ++YL E + I
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYL--EKKNFI 133
Query: 495 APHGHIKSSNVLLNESLEPVLADYGLIPVM-----NQESAQELMIAYKSPEFLQLGRITK 549
H + + N L+ E+ +AD+GL +M + + I + +PE L + +
Sbjct: 134 --HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 550 KTDVWSLGVLILEIMT 565
K+DVW+ GVL+ EI T
Sbjct: 192 KSDVWAFGVLLWEIAT 207
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 73 YFHDATRVYLILEYAPLGTVYREL---QKLSK--FDEQRTATYITELANALSYCH----S 123
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRIT 548
H IK N+LL + E +AD+G ++ S++ + Y PE ++ GR+
Sbjct: 124 KRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIE-GRMH 180
Query: 549 -KKTDVWSLGVLILEIMTGK--FPANFLQQGKK 578
+K D+WSLGVL E + GK F AN Q+ K
Sbjct: 181 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 213
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 92/194 (47%), Gaps = 12/194 (6%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG G +G Y+ ++ V + + + + EEF + + ++HPNL+ L+ R
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+ ++ EF+ +L L + + ++ L + ++ ++YL E + I
Sbjct: 81 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYL--EKKNFI-- 133
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM-----NQESAQELMIAYKSPEFLQLGRITKKT 551
H + + N L+ E+ +AD+GL +M + + I + +PE L + + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 552 DVWSLGVLILEIMT 565
DVW+ GVL+ EI T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 96/202 (47%), Gaps = 19/202 (9%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
E LG G +GS YKA TG ++ +K+ +++ +E + + + + P+++
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--QEIIKEISIMQQCDSPHVVKYYGS 92
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY--RELP 491
Y++ + +V E+ S++ + L +L I++ KGL+YL+ R++
Sbjct: 93 YFKNTDLWIVMEYCGAGSVSDIIR----LRNKTLTEDEIATILQSTLKGLEYLHFMRKI- 147
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRI 547
H IK+ N+LLN LAD+G+ + A+ + + +PE +Q
Sbjct: 148 -----HRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGY 202
Query: 548 TKKTDVWSLGVLILEIMTGKFP 569
D+WSLG+ +E+ GK P
Sbjct: 203 NCVADIWSLGITAIEMAEGKPP 224
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 92/194 (47%), Gaps = 12/194 (6%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG G +G Y+ ++ V + + + + EEF + + ++HPNL+ L+ R
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+ ++ EF+ +L L + + ++ L + ++ ++YL E + I
Sbjct: 82 EPPFYIIIEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYL--EKKNFI-- 134
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVMN-----QESAQELMIAYKSPEFLQLGRITKKT 551
H + + N L+ E+ +AD+GL +M + + I + +PE L + + K+
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 552 DVWSLGVLILEIMT 565
DVW+ GVL+ EI T
Sbjct: 195 DVWAFGVLLWEIAT 208
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 92/205 (44%), Gaps = 22/205 (10%)
Query: 375 EILGSGCFGSSYKASLSTG----AMMVVKRFKQ-MNNVGREEFQEHMRRLGRLRHPNLLP 429
E++G+G FG + L + + +K K R EF +G+ HPN++
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L +++ EF+ +L L L + +++G+A G++YL
Sbjct: 82 LEGVVTNSMPVMILTEFMENGALDSFLR----LNDGQFTVIQLVGMLRGIASGMRYL--- 134
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQ---------ELMIAYKSPE 540
+ H + + N+L+N +L ++D+GL + + S+ ++ I + +PE
Sbjct: 135 -AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPE 193
Query: 541 FLQLGRITKKTDVWSLGVLILEIMT 565
+ + T +D WS G+++ E+M+
Sbjct: 194 AIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 92/194 (47%), Gaps = 12/194 (6%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG G +G Y+ ++ V + + + + EEF + + ++HPNL+ L+ R
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+ ++ EF+ +L L + + ++ L + ++ ++YL E + I
Sbjct: 81 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYL--EKKNFI-- 133
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM-----NQESAQELMIAYKSPEFLQLGRITKKT 551
H + + N L+ E+ +AD+GL +M + + I + +PE L + + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 552 DVWSLGVLILEIMT 565
DVW+ GVL+ EI T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 78 YFHDATRVYLILEYAPLGTVYREL---QKLSK--FDEQRTATYITELANALSYCH----S 128
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRIT 548
H IK N+LL + E +A++G ++ S++ + Y PE ++
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIANFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 186
Query: 549 KKTDVWSLGVLILEIMTGK--FPANFLQQGKK 578
+K D+WSLGVL E + GK F AN Q+ K
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 218
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 92/194 (47%), Gaps = 12/194 (6%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG G +G Y+ ++ V + + + + EEF + + ++HPNL+ L+ R
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+ ++ EF+ +L L + + ++ L + ++ ++YL E + I
Sbjct: 86 EPPFYIIIEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYL--EKKNFI-- 138
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVMN-----QESAQELMIAYKSPEFLQLGRITKKT 551
H + + N L+ E+ +AD+GL +M + + I + +PE L + + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 552 DVWSLGVLILEIMT 565
DVW+ GVL+ EI T
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 16/196 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG G +G Y+ ++ V + + + + EEF + + ++HPNL+ L+ R
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 437 KEEKLLVHEFVPKRSLAVNLH--GHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLI 494
+ ++ EF+ +L L Q + L L + ++ ++YL E + I
Sbjct: 79 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYL--EKKNFI 131
Query: 495 APHGHIKSSNVLLNESLEPVLADYGLIPVMN-----QESAQELMIAYKSPEFLQLGRITK 549
H + + N L+ E+ +AD+GL +M + + I + +PE L + +
Sbjct: 132 --HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 550 KTDVWSLGVLILEIMT 565
K+DVW+ GVL+ EI T
Sbjct: 190 KSDVWAFGVLLWEIAT 205
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Query: 375 EILGSGCFGSSYKASLSTGA----MMVVKRFKQ-MNNVGREEFQEHMRRLGRLRHPNLLP 429
+++G G FG L + +K K + R +F +G+ HPN++
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L + + +++ E++ SL L + + +++G+ G++YL
Sbjct: 95 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDG----RFTVIQLVGMLRGIGSGMKYL--- 147
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQ-----ELMIAYKSPEFL 542
+ A H + + N+L+N +L ++D+G+ V+ + E+A ++ I + +PE +
Sbjct: 148 -SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 206
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ T +DVWS G+++ E+M+
Sbjct: 207 AYRKFTSASDVWSYGIVMWEVMS 229
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 96/205 (46%), Gaps = 22/205 (10%)
Query: 375 EILGSGCFGSSYKASLSTG----AMMVVKRFKQ-MNNVGREEFQEHMRRLGRLRHPNLLP 429
E++G+G FG + L + + +K K R EF +G+ HPN++
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L +++ EF+ +L L + GQ ++ + +++G+A G++YL
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFLRLND--GQFTVI--QLVGMLRGIASGMRYL--- 132
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQ---------ELMIAYKSPE 540
+ H + + N+L+N +L ++D+GL + + S+ ++ I + +PE
Sbjct: 133 -AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPE 191
Query: 541 FLQLGRITKKTDVWSLGVLILEIMT 565
+ + T +D WS G+++ E+M+
Sbjct: 192 AIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 16/196 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG G +G Y+ ++ V + + + + EEF + + ++HPNL+ L+ R
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 437 KEEKLLVHEFVPKRSLAVNLH--GHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLI 494
+ ++ EF+ +L L Q + L L + ++ ++YL E + I
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYL--EKKNFI 133
Query: 495 APHGHIKSSNVLLNESLEPVLADYGLIPVMN-----QESAQELMIAYKSPEFLQLGRITK 549
H + + N L+ E+ +AD+GL +M + + I + +PE L + +
Sbjct: 134 --HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 550 KTDVWSLGVLILEIMT 565
K+DVW+ GVL+ EI T
Sbjct: 192 KSDVWAFGVLLWEIAT 207
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 16/196 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG G +G Y+ ++ V + + + + EEF + + ++HPNL+ L+ R
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 437 KEEKLLVHEFVPKRSLAVNLH--GHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLI 494
+ ++ EF+ +L L Q + L L + ++ ++YL E + I
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYL--EKKNFI 133
Query: 495 APHGHIKSSNVLLNESLEPVLADYGLIPVMN-----QESAQELMIAYKSPEFLQLGRITK 549
H + + N L+ E+ +AD+GL +M + + I + +PE L + +
Sbjct: 134 --HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 550 KTDVWSLGVLILEIMT 565
K+DVW+ GVL+ EI T
Sbjct: 192 KSDVWAFGVLLWEIAT 207
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 121/258 (46%), Gaps = 29/258 (11%)
Query: 372 ASAEILGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL 430
+ EILG G FG +K +TG + K K +EE + + + +L H NL+ L
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYREL 490
+ K + +LV E+V L + ++ LD + +K + +G++++++
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIID-ESYNLTELD---TILFMKQICEGIRHMHQ-- 205
Query: 491 PSLIAPHGHIKSSNVL-LNESLEPV-LADYGLIPVMNQESAQELMIAYKSPEFL-----Q 543
+ H +K N+L +N + + + D+GL + ++L + + +PEFL
Sbjct: 206 --MYILHLDLKPENILCVNRDAKQIKIIDFGL--ARRYKPREKLKVNFGTPEFLAPEVVN 261
Query: 544 LGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDK 603
++ TD+WS+GV+ +++G P FL D D A +N++LA R ++ D+
Sbjct: 262 YDFVSFPTDMWSVGVIAYMLLSGLSP--FL-----GDND-AETLNNILA---CRWDLEDE 310
Query: 604 EMADERNSEGEMVKLLKI 621
E D E + L I
Sbjct: 311 EFQDISEEAKEFISKLLI 328
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
E LG+G G + + + VK KQ ++ + F + +L+H L+ L A
Sbjct: 18 VERLGAGQAGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
+E ++ E++ SL L + L L + +A+G+ ++ E +
Sbjct: 77 V-TQEPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFI--EERNY 130
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGLIPVMN--QESAQE---LMIAYKSPEFLQLGRIT 548
I H ++++N+L++++L +AD+GL ++ + +A+E I + +PE + G T
Sbjct: 131 I--HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 549 KKTDVWSLGVLILEIMT-GKFP 569
K+DVWS G+L+ EI+T G+ P
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIP 210
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKR--FK-QMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + FK Q+ G E + + + LRHPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL---QKLSK--FDEQRTATYITELANALSYCH----S 129
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRIT 548
H IK N+LL + E +A++G ++ S++ + Y PE ++
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIANFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 187
Query: 549 KKTDVWSLGVLILEIMTGK--FPANFLQQGKK 578
+K D+WSLGVL E + GK F AN Q+ K
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 40/221 (18%)
Query: 375 EILGSGCFGSSYKASL-------STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNL 427
E LG FG YK L T A+ + + REEF+ RL+HPN+
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 428 LPLVAYYYRKEEKLLV---------HEFVPKRSLAVNLHGHQALG--------QPSLDWP 470
+ L+ + + ++ HEF+ RS H +G + +L+ P
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRS------PHSDVGSTDDDRTVKSALEPP 145
Query: 471 SRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQ 530
+ +V +A G++YL S H + + NVL+ + L ++D GL +
Sbjct: 146 DFVHLVAQIAAGMEYL----SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYY 201
Query: 531 ELM------IAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+L+ I + +PE + G+ + +D+WS GV++ E+ +
Sbjct: 202 KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 409 REEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD 468
R +F +G+ HPN++ L R ++V E++ SL L H GQ ++
Sbjct: 94 RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD--GQFTI- 150
Query: 469 WPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE- 527
+ +++GV G++YL L H + + NVL++ +L ++D+GL V+ +
Sbjct: 151 -MQLVGMLRGVGAGMRYL----SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205
Query: 528 ------SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ ++ I + +PE + + +DVWS GV++ E++
Sbjct: 206 DAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 104/235 (44%), Gaps = 42/235 (17%)
Query: 373 SAEILGSGCFGSSYKASLS-------TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHP 425
S ++G G FG Y A+ + R +M V E F + L HP
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQV--EAFLREGLLMRGLNHP 82
Query: 426 NLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGH--QALGQPSLDWPSRLKIVKG--VAK 481
N+L L+ +L E +P L HG Q + P + + I G VA+
Sbjct: 83 NVLALIGI-------MLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVAR 135
Query: 482 GLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI-PVMNQE--SAQE-----LM 533
G++YL + H + + N +L+ES +AD+GL ++++E S Q+ L
Sbjct: 136 GMEYLAEQK----FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLP 191
Query: 534 IAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFP----------ANFLQQGKK 578
+ + + E LQ R T K+DVWS GVL+ E++T P +FL QG++
Sbjct: 192 VKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRR 246
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 409 REEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD 468
R +F +G+ HPN++ L R ++V E++ SL L H GQ ++
Sbjct: 94 RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD--GQFTI- 150
Query: 469 WPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE- 527
+ +++GV G++YL L H + + NVL++ +L ++D+GL V+ +
Sbjct: 151 -MQLVGMLRGVGAGMRYL----SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205
Query: 528 ------SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ ++ I + +PE + + +DVWS GV++ E++
Sbjct: 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFK--QMNNVGREEFQEHMRRLGRLRHPNLLPLVAYY 434
LG+G G +K S +++ ++ ++ R + ++ L P ++ +
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 435 YRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLI 494
Y E + E + SL L + + L K+ V KGL YL RE ++
Sbjct: 77 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYL-REKHKIM 130
Query: 495 APHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM--IAYKSPEFLQLGRITKKTD 552
H +K SN+L+N E L D+G+ + E A E + +Y SPE LQ + ++D
Sbjct: 131 --HRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSVQSD 188
Query: 553 VWSLGVLILEIMTGKFP 569
+WS+G+ ++E+ G++P
Sbjct: 189 IWSMGLSLVEMAVGRYP 205
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 31/226 (13%)
Query: 358 RDDVERFDLHDLLRASAEILGSGCFGS-SYKASLSTGAMMVVKRFKQMNNVGREEFQEHM 416
R +++RF + + G G FG+ STG + +K+ Q E Q M
Sbjct: 19 RKEMDRFQVE-------RMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQI-M 70
Query: 417 RRLGRLRHPNLLPLVAYYY------RKEEKL-LVHEFVPK--RSLAVNLHGHQALGQPSL 467
+ L L HPN++ L +Y+Y R++ L +V E+VP N + Q P L
Sbjct: 71 QDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPIL 130
Query: 468 DWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPV-LADYGLIPVMNQ 526
++++ + LPS+ H IK NVL+NE+ + L D+G ++
Sbjct: 131 IKVFLFQLIRSIG------CLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSP 184
Query: 527 ESAQELMIA---YKSPEFLQLG--RITKKTDVWSLGVLILEIMTGK 567
I Y++PE + G T D+WS+G + E+M G+
Sbjct: 185 SEPNVAYICSRYYRAPELI-FGNQHYTTAVDIWSVGCIFAEMMLGE 229
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 17/200 (8%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYY 434
+ +G G FG G + VK K N+ + F + +LRH NL+ L+
Sbjct: 27 QTIGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 435 YRKEEKL-LVHEFVPKRSLAVNLH--GHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
++ L +V E++ K SL L G LG L LK V + ++YL E
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL-----LKFSLDVCEAMEYL--EGN 136
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIP-VMNQESAQELMIAYKSPEFLQLGRITKK 550
+ + H + + NVL++E ++D+GL + + +L + + +PE L+ + + K
Sbjct: 137 NFV--HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTK 194
Query: 551 TDVWSLGVLILEIMT-GKFP 569
+DVWS G+L+ EI + G+ P
Sbjct: 195 SDVWSFGILLWEIYSFGRVP 214
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 24/203 (11%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
+GSG +G+ A TGA + +K+ Q + ++E +R L +RH N++ L+
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRE-LRLLKHMRHENVIGLLD 91
Query: 433 YYYRKE------EKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
+ E + LV F+ + L H+ LG+ + + +V + KGL+Y+
Sbjct: 92 VFTPDETLDDFTDFYLVMPFMG--TDLGKLMKHEKLGEDRIQF-----LVYQMLKGLRYI 144
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPE-FLQL 544
+ +I H +K N+ +NE E + D+GL + E ++ Y++PE L
Sbjct: 145 HAA--GII--HRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNW 200
Query: 545 GRITKKTDVWSLGVLILEIMTGK 567
R T+ D+WS+G ++ E++TGK
Sbjct: 201 MRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 12/194 (6%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG G +G Y ++ V + + + + EEF + + ++HPNL+ L+
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+ +V E++P +L L + + + L + ++ ++YL E + I
Sbjct: 100 EPPFYIVTEYMPYGNLLDYL---RECNREEVTAVVLLYMATQISSAMEYL--EKKNFI-- 152
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVMN-----QESAQELMIAYKSPEFLQLGRITKKT 551
H + + N L+ E+ +AD+GL +M + + I + +PE L + K+
Sbjct: 153 HRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKS 212
Query: 552 DVWSLGVLILEIMT 565
DVW+ GVL+ EI T
Sbjct: 213 DVWAFGVLLWEIAT 226
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 17/200 (8%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYY 434
+ +G G FG G + VK K N+ + F + +LRH NL+ L+
Sbjct: 199 QTIGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 435 YRKEEKL-LVHEFVPKRSLAVNLH--GHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
++ L +V E++ K SL L G LG L LK V + ++YL E
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL-----LKFSLDVCEAMEYL--EGN 308
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIP-VMNQESAQELMIAYKSPEFLQLGRITKK 550
+ + H + + NVL++E ++D+GL + + +L + + +PE L+ + + K
Sbjct: 309 NFV--HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTK 366
Query: 551 TDVWSLGVLILEIMT-GKFP 569
+DVWS G+L+ EI + G+ P
Sbjct: 367 SDVWSFGILLWEIYSFGRVP 386
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 17/200 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRR----LGRLRHPNLLPLVA 432
LG G FG+ Y A +V + + + +E + +RR L HPN+L L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y+Y + L+ E+ P+ L L + D I++ +A L Y + +
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQ-----KSCTFDEQRTATIMEELADALMYCHGK--K 143
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGL---IPVMNQESAQELMIAYKSPEFLQLGRITK 549
+I H IK N+LL E +AD+G P + +++ + Y PE ++ +
Sbjct: 144 VI--HRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCG-TLDYLPPEMIEGRMHNE 200
Query: 550 KTDVWSLGVLILEIMTGKFP 569
K D+W +GVL E++ G P
Sbjct: 201 KVDLWCIGVLCYELLVGNPP 220
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 17/200 (8%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYY 434
+ +G G FG G + VK K N+ + F + +LRH NL+ L+
Sbjct: 12 QTIGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 435 YRKEEKL-LVHEFVPKRSLAVNLH--GHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
++ L +V E++ K SL L G LG L LK V + ++YL E
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL-----LKFSLDVCEAMEYL--EGN 121
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIP-VMNQESAQELMIAYKSPEFLQLGRITKK 550
+ + H + + NVL++E ++D+GL + + +L + + +PE L+ + + K
Sbjct: 122 NFV--HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTK 179
Query: 551 TDVWSLGVLILEIMT-GKFP 569
+DVWS G+L+ EI + G+ P
Sbjct: 180 SDVWSFGILLWEIYSFGRVP 199
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 86/200 (43%), Gaps = 17/200 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRR----LGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + + + + +RR LRHPN+L L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL---QKLSR--FDEQRTATYITELANALSYCH----S 130
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM---IAYKSPEFLQLGRITK 549
H IK N+LL + E +AD+G V S ++ + + Y PE ++ +
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGW-SVHAPSSRRDTLCGTLDYLPPEMIEGRMHDE 189
Query: 550 KTDVWSLGVLILEIMTGKFP 569
K D+WSLGVL E + G P
Sbjct: 190 KVDLWSLGVLCYEFLVGMPP 209
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 94/203 (46%), Gaps = 20/203 (9%)
Query: 375 EILGSGCFGSSYKASLSTGA----MMVVKRFKQ-MNNVGREEFQEHMRRLGRLRHPNLLP 429
+++G G FG L + +K K + R +F +G+ HPN++
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L + + +++ E++ SL L + + +++G+ G++YL
Sbjct: 80 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDG----RFTVIQLVGMLRGIGSGMKYL--- 132
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQ-----ELMIAYKSPEFL 542
+ H + + N+L+N +L ++D+G+ V+ + E+A ++ I + +PE +
Sbjct: 133 -SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 191
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ T +DVWS G+++ E+M+
Sbjct: 192 AYRKFTSASDVWSYGIVMWEVMS 214
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 377 LGSGCFGSSYKASL-----STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL- 430
LG G FGS +TGA++ VK+ + + +FQ ++ L L ++
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 431 -VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
V+Y + E LV E++P L L H+A LD L + KG++YL
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRA----RLDASRLLLYSSQICKGMEYL--- 127
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM-------IAYKSPEFL 542
S H + + N+L+ +AD+GL ++ + ++ I + +PE L
Sbjct: 128 -GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESL 186
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
++++DVWS GV++ E+ T
Sbjct: 187 SDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 375 EILGSGCFGSSYKASL----STGAMMVVKRFKQMNNVGR-EEFQEHMRRLGRLRHPNLLP 429
E++G G FG Y +L VK ++ ++G +F + HPN+L
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ R E LV K N ++ P++ + VAKG++YL
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVK--DLIGFGLQVAKGMKYL--- 167
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--------NQESAQELMIAYKSPEF 541
S H + + N +L+E +AD+GL M + ++ +L + + + E
Sbjct: 168 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 226
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
LQ + T K+DVWS GVL+ E+MT P
Sbjct: 227 LQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 94/203 (46%), Gaps = 20/203 (9%)
Query: 375 EILGSGCFGSSYKASLSTGA----MMVVKRFKQ-MNNVGREEFQEHMRRLGRLRHPNLLP 429
+++G G FG L + +K K + R +F +G+ HPN++
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L + + +++ E++ SL L + + +++G+ G++YL
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDG----RFTVIQLVGMLRGIGSGMKYL--- 126
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQESAQ-----ELMIAYKSPEFL 542
+ H + + N+L+N +L ++D+G+ V+ + E+A ++ I + +PE +
Sbjct: 127 -SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 185
Query: 543 QLGRITKKTDVWSLGVLILEIMT 565
+ T +DVWS G+++ E+M+
Sbjct: 186 AYRKFTSASDVWSYGIVMWEVMS 208
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 375 EILGSGCFGSSYKASL----STGAMMVVKRFKQMNNVGR-EEFQEHMRRLGRLRHPNLLP 429
E++G G FG Y +L VK ++ ++G +F + HPN+L
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ R E LV K N ++ P++ + VAKG++YL
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVK--DLIGFGLQVAKGMKYL--- 148
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--------NQESAQELMIAYKSPEF 541
S H + + N +L+E +AD+GL M + ++ +L + + + E
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
LQ + T K+DVWS GVL+ E+MT P
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYY 434
+ +G G FG G + VK K N+ + F + +LRH NL+ L+
Sbjct: 18 QTIGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 435 YRKEEKL-LVHEFVPKRSLAVNLH--GHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
++ L +V E++ K SL L G LG L LK V + ++YL E
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL-----LKFSLDVCEAMEYL--EGN 127
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIP-VMNQESAQELMIAYKSPEFLQLGRITKK 550
+ + H + + NVL++E ++D+GL + + +L + + +PE L+ + K
Sbjct: 128 NFV--HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTK 185
Query: 551 TDVWSLGVLILEIMT-GKFP 569
+DVWS G+L+ EI + G+ P
Sbjct: 186 SDVWSFGILLWEIYSFGRVP 205
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 17/202 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRR----LGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + + + +E + +RR LRHPN+L +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ ++ L+ EF P+ L L H D ++ +A L Y +
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHG-----RFDEQRSATFMEELADALHYCHER--K 135
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM---IAYKSPEFLQLGRITK 549
+I H IK N+L+ E +AD+G V + M + Y PE ++ +
Sbjct: 136 VI--HRDIKPENLLMGYKGELKIADFGW-SVHAPSLRRRXMCGTLDYLPPEMIEGKTHDE 192
Query: 550 KTDVWSLGVLILEIMTGKFPAN 571
K D+W GVL E + G P +
Sbjct: 193 KVDLWCAGVLCYEFLVGMPPFD 214
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 375 EILGSGCFGSSYKASL----STGAMMVVKRFKQMNNVGR-EEFQEHMRRLGRLRHPNLLP 429
E++G G FG Y +L VK ++ ++G +F + HPN+L
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ R E LV K N ++ P++ + VAKG++YL
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVK--DLIGFGLQVAKGMKYL--- 149
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--------NQESAQELMIAYKSPEF 541
S H + + N +L+E +AD+GL M + ++ +L + + + E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
LQ + T K+DVWS GVL+ E+MT P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 17/202 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRR----LGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + + + +E + +RR LRHPN+L +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ ++ L+ EF P+ L L H D ++ +A L Y +
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHG-----RFDEQRSATFMEELADALHYCHER--K 134
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM---IAYKSPEFLQLGRITK 549
+I H IK N+L+ E +AD+G V + M + Y PE ++ +
Sbjct: 135 VI--HRDIKPENLLMGYKGELKIADFGW-SVHAPSLRRRXMCGTLDYLPPEMIEGKTHDE 191
Query: 550 KTDVWSLGVLILEIMTGKFPAN 571
K D+W GVL E + G P +
Sbjct: 192 KVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 375 EILGSGCFGSSYKASL----STGAMMVVKRFKQMNNVGR-EEFQEHMRRLGRLRHPNLLP 429
E++G G FG Y +L VK ++ ++G +F + HPN+L
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ R E LV K N ++ P++ + VAKG++YL
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVK--DLIGFGLQVAKGMKYL--- 141
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--------NQESAQELMIAYKSPEF 541
S H + + N +L+E +AD+GL M + ++ +L + + + E
Sbjct: 142 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
LQ + T K+DVWS GVL+ E+MT P
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 25/214 (11%)
Query: 377 LGSGCFGSSYKASLST------GAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL 430
LG G FG + A ++ VK K ++ R++F L L+H +++
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVNLHGH------QALGQP--SLDWPSRLKIVKGVAKG 482
+ ++V E++ L L H A G P L L I + +A G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 483 LQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL------IPVMNQESAQELMIAY 536
+ YL S H + + N L+ E+L + D+G+ L I +
Sbjct: 141 MVYL----ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 196
Query: 537 KSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFP 569
PE + + T ++DVWSLGV++ EI T GK P
Sbjct: 197 MPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 17/202 (8%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRR----LGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + + + +E + +RR LRHPN+L +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ ++ L+ EF P+ L L H D ++ +A L Y +
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHG-----RFDEQRSATFMEELADALHYCHER--K 134
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM---IAYKSPEFLQLGRITK 549
+I H IK N+L+ E +AD+G V + M + Y PE ++ +
Sbjct: 135 VI--HRDIKPENLLMGYKGELKIADFGW-SVHAPSLRRRXMCGTLDYLPPEMIEGKTHDE 191
Query: 550 KTDVWSLGVLILEIMTGKFPAN 571
K D+W GVL E + G P +
Sbjct: 192 KVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 375 EILGSGCFGSSYKASL----STGAMMVVKRFKQMNNVGR-EEFQEHMRRLGRLRHPNLLP 429
E++G G FG Y +L VK ++ ++G +F + HPN+L
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ R E LV K N ++ P++ + VAKG++YL
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVK--DLIGFGLQVAKGMKYL--- 146
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--------NQESAQELMIAYKSPEF 541
S H + + N +L+E +AD+GL M + ++ +L + + + E
Sbjct: 147 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
LQ + T K+DVWS GVL+ E+MT P
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 375 EILGSGCFGSSYKASL----STGAMMVVKRFKQMNNVGR-EEFQEHMRRLGRLRHPNLLP 429
E++G G FG Y +L VK ++ ++G +F + HPN+L
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ R E LV K N ++ P++ + VAKG++YL
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVK--DLIGFGLQVAKGMKYL--- 147
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--------NQESAQELMIAYKSPEF 541
S H + + N +L+E +AD+GL M + ++ +L + + + E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
LQ + T K+DVWS GVL+ E+MT P
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 86/164 (52%), Gaps = 15/164 (9%)
Query: 409 REEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD 468
R +F +G+ HPN++ L + + ++V E++ SL L + GQ ++
Sbjct: 67 RRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKND--GQFTVI 124
Query: 469 WPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--NQ 526
+ +++G++ G++YL + H + + N+L+N +L ++D+GL V+ +
Sbjct: 125 --QLVGMLRGISAGMKYL----SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 178
Query: 527 ESAQ-----ELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
E+A ++ I + +PE + + T +DVWS G+++ E+++
Sbjct: 179 EAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 375 EILGSGCFGSSYKASL----STGAMMVVKRFKQMNNVGR-EEFQEHMRRLGRLRHPNLLP 429
E++G G FG Y +L VK ++ ++G +F + HPN+L
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ R E LV K N ++ P++ + VAKG++YL
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVK--DLIGFGLQVAKGMKYL--- 144
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--------NQESAQELMIAYKSPEF 541
S H + + N +L+E +AD+GL M + ++ +L + + + E
Sbjct: 145 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
LQ + T K+DVWS GVL+ E+MT P
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 19/201 (9%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRR----LGRLRHPNLLPLVA 432
LG G FG+ Y A ++ + + + + +RR LRHPN+L L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y++ L+ E+ P ++ L Q L + D + +A L Y + S
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL---QKLSR--FDEQRTATYITELANALSYCH----S 130
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRIT 548
H IK N+LL + E +AD+G ++ S++ + Y PE ++
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 188
Query: 549 KKTDVWSLGVLILEIMTGKFP 569
+K D+WSLGVL E + G P
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPP 209
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQ-MNNVGREEFQEHMRRLGRLRHPNLLPLV 431
E +G G FG + L + ++ VK ++ + + +F + R L + HPN++ L+
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
+K+ +V E V L A L + L++V A G++YL
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGA----RLRVKTLLQMVGDAAAGMEYL----E 230
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESA----------QELMIAYKSPEF 541
S H + + N L+ E ++D+G M++E A +++ + + +PE
Sbjct: 231 SKCCIHRDLAARNCLVTEKNVLKISDFG----MSREEADGVXAASGGLRQVPVKWTAPEA 286
Query: 542 LQLGRITKKTDVWSLGVLILEIMT 565
L GR + ++DVWS G+L+ E +
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFS 310
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 375 EILGSGCFGSSYKASL----STGAMMVVKRFKQMNNVGR-EEFQEHMRRLGRLRHPNLLP 429
E++G G FG Y +L VK ++ ++G +F + HPN+L
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ R E LV K N ++ P++ + VAKG++YL
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVK--DLIGFGLQVAKGMKYL--- 168
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--------NQESAQELMIAYKSPEF 541
S H + + N +L+E +AD+GL M + ++ +L + + + E
Sbjct: 169 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 227
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
LQ + T K+DVWS GVL+ E+MT P
Sbjct: 228 LQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 375 EILGSGCFGSSYKASL----STGAMMVVKRFKQMNNVGR-EEFQEHMRRLGRLRHPNLLP 429
E++G G FG Y +L VK ++ ++G +F + HPN+L
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ R E LV K N ++ P++ + VAKG++YL
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVK--DLIGFGLQVAKGMKYL--- 148
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--------NQESAQELMIAYKSPEF 541
S H + + N +L+E +AD+GL M + ++ +L + + + E
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
LQ + T K+DVWS GVL+ E+MT P
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQ-MNNVGREEFQEHMRRLGRLRHPNLLPLV 431
E +G G FG + L + ++ VK ++ + + +F + R L + HPN++ L+
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
+K+ +V E V L A L + L++V A G++YL
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGA----RLRVKTLLQMVGDAAAGMEYL----E 230
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESA----------QELMIAYKSPEF 541
S H + + N L+ E ++D+G M++E A +++ + + +PE
Sbjct: 231 SKCCIHRDLAARNCLVTEKNVLKISDFG----MSREEADGVYAASGGLRQVPVKWTAPEA 286
Query: 542 LQLGRITKKTDVWSLGVLILEIMT 565
L GR + ++DVWS G+L+ E +
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFS 310
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 375 EILGSGCFGSSYKASL----STGAMMVVKRFKQMNNVGR-EEFQEHMRRLGRLRHPNLLP 429
E++G G FG Y +L VK ++ ++G +F + HPN+L
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ R E LV K N ++ P++ + VAKG++YL
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVK--DLIGFGLQVAKGMKYL--- 149
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--------NQESAQELMIAYKSPEF 541
S H + + N +L+E +AD+GL M + ++ +L + + + E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
LQ + T K+DVWS GVL+ E+MT P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 108/223 (48%), Gaps = 36/223 (16%)
Query: 377 LGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGR----EEFQEHMRR---LGRLRHPNLL 428
+G G FG +K L +++ +K ++ G E+FQE R + L HPN++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPS-LDWPSRLKIVKGVAKGLQYLY 487
L + +V EFVP L H+ L + + W +L+++ +A G++Y+
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLY-----HRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 488 RELPSLIAPHGHIKSSNVLLNESLE---PV---LADYGLIPVMNQESAQELM-----IAY 536
+ P ++ H ++S N+ L +SL+ PV +AD+GL +Q+S + +
Sbjct: 140 NQNPPIV--HRDLRSPNIFL-QSLDENAPVCAKVADFGL----SQQSVHSVSGLLGNFQW 192
Query: 537 KSPEFL--QLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGK 577
+PE + + T+K D +S +++ I+TG+ P + GK
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK 235
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 92/213 (43%), Gaps = 30/213 (14%)
Query: 377 LGSGCFG----SSYKASLSTGAMMVVKRFK------QMNNVGREEFQEHMRR----LGRL 422
LGSG +G K S A+ V+K+ + +N E+F E + L L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 423 RHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKG 482
HPN++ L + K+ LV EF L Q + + D I+K + G
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELF-----EQIINRHKFDECDAANIMKQILSG 158
Query: 483 LQYLYRELPSLIAPHGHIKSSNVLL---NESLEPVLADYGLIPVMNQESA--QELMIAYK 537
+ YL++ H IK N+LL N L + D+GL +++ L AY
Sbjct: 159 ICYLHKH----NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYY 214
Query: 538 -SPEFLQLGRITKKTDVWSLGVLILEIMTGKFP 569
+PE L+ + +K DVWS GV++ ++ G P
Sbjct: 215 IAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 24/204 (11%)
Query: 377 LGSGCFGSSYKASL-----STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL- 430
LG G FGS +TGA++ VK+ + + +FQ ++ L L ++
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 431 -VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
V+Y ++ LV E++P L L H+A LD L + KG++YL
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA----RLDASRLLLYSSQICKGMEYL--- 131
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMN--------QESAQELMIAYKSPEF 541
S H + + N+L+ +AD+GL ++ +E Q + Y +PE
Sbjct: 132 -GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APES 189
Query: 542 LQLGRITKKTDVWSLGVLILEIMT 565
L ++++DVWS GV++ E+ T
Sbjct: 190 LSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 24/204 (11%)
Query: 377 LGSGCFGSSYKASL-----STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL- 430
LG G FGS +TGA++ VK+ + + +FQ ++ L L ++
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 431 -VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
V+Y ++ LV E++P L L H+A LD L + KG++YL
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA----RLDASRLLLYSSQICKGMEYL--- 130
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMN--------QESAQELMIAYKSPEF 541
S H + + N+L+ +AD+GL ++ +E Q + Y +PE
Sbjct: 131 -GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APES 188
Query: 542 LQLGRITKKTDVWSLGVLILEIMT 565
L ++++DVWS GV++ E+ T
Sbjct: 189 LSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 24/204 (11%)
Query: 377 LGSGCFGSSYKASL-----STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL- 430
LG G FGS +TGA++ VK+ + + +FQ ++ L L ++
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 431 -VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
V+Y ++ LV E++P L L H+A LD L + KG++YL
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA----RLDASRLLLYSSQICKGMEYL--- 143
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMN--------QESAQELMIAYKSPEF 541
S H + + N+L+ +AD+GL ++ +E Q + Y +PE
Sbjct: 144 -GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APES 201
Query: 542 LQLGRITKKTDVWSLGVLILEIMT 565
L ++++DVWS GV++ E+ T
Sbjct: 202 LSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 375 EILGSGCFGSSYKASL----STGAMMVVKRFKQMNNVGR-EEFQEHMRRLGRLRHPNLLP 429
E++G G FG Y +L VK ++ ++G +F + HPN+L
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ R E LV K N ++ P++ + VAKG+++L
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVK--DLIGFGLQVAKGMKFL--- 150
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--------NQESAQELMIAYKSPEF 541
S H + + N +L+E +AD+GL M + ++ +L + + + E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES 209
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
LQ + T K+DVWS GVL+ E+MT P
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 375 EILGSGCFGSSYKASL----STGAMMVVKRFKQMNNVGR-EEFQEHMRRLGRLRHPNLLP 429
E++G G FG Y +L VK ++ ++G +F + HPN+L
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ R E LV K N ++ P++ + VAKG+++L
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVK--DLIGFGLQVAKGMKFL--- 150
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--------NQESAQELMIAYKSPEF 541
S H + + N +L+E +AD+GL M + ++ +L + + + E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 209
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
LQ + T K+DVWS GVL+ E+MT P
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFK--QMNNVGREEFQEHMRRLGRLRHPNLLPLVAYY 434
LG+G G +K S +++ ++ ++ R + ++ L P ++ +
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 135
Query: 435 YRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLI 494
Y E + E + SL L + + L K+ V KGL YL RE ++
Sbjct: 136 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYL-REKHKIM 189
Query: 495 APHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM--IAYKSPEFLQLGRITKKTD 552
H +K SN+L+N E L D+G+ + A + +Y SPE LQ + ++D
Sbjct: 190 --HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSD 247
Query: 553 VWSLGVLILEIMTGKFP 569
+WS+G+ ++E+ G++P
Sbjct: 248 IWSMGLSLVEMAVGRYP 264
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 375 EILGSGCFGSSYKASL----STGAMMVVKRFKQMNNVGR-EEFQEHMRRLGRLRHPNLLP 429
E++G G FG Y +L VK ++ ++G +F + HPN+L
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ R E LV K N ++ P++ + VAKG+++L
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVK--DLIGFGLQVAKGMKFL--- 208
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--------NQESAQELMIAYKSPEF 541
S H + + N +L+E +AD+GL M + ++ +L + + + E
Sbjct: 209 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 267
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
LQ + T K+DVWS GVL+ E+MT P
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 22/202 (10%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFK--QMNNVGREEFQEHMRRLGRLRHPNLLPLVAYY 434
LG+G G +K S +++ ++ ++ R + ++ L P ++ +
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100
Query: 435 YRKEEKLLVHEFVPKRSLAVNLHG-----HQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
Y E + E + SL L Q LG+ S+ V KGL YL RE
Sbjct: 101 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI----------AVIKGLTYL-RE 149
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM--IAYKSPEFLQLGRI 547
++ H +K SN+L+N E L D+G+ + A + +Y SPE LQ
Sbjct: 150 KHKIM--HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY 207
Query: 548 TKKTDVWSLGVLILEIMTGKFP 569
+ ++D+WS+G+ ++E+ G++P
Sbjct: 208 SVQSDIWSMGLSLVEMAVGRYP 229
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 375 EILGSGCFGSSYKASL----STGAMMVVKRFKQMNNVGR-EEFQEHMRRLGRLRHPNLLP 429
E++G G FG Y +L VK ++ ++G +F + HPN+L
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ R E LV K N ++ P++ + VAKG+++L
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVK--DLIGFGLQVAKGMKFL--- 149
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--------NQESAQELMIAYKSPEF 541
S H + + N +L+E +AD+GL M + ++ +L + + + E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
LQ + T K+DVWS GVL+ E+MT P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 22/202 (10%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFK--QMNNVGREEFQEHMRRLGRLRHPNLLPLVAYY 434
LG+G G +K S +++ ++ ++ R + ++ L P ++ +
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 435 YRKEEKLLVHEFVPKRSLAVNLHG-----HQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
Y E + E + SL L Q LG+ S+ V KGL YL RE
Sbjct: 93 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI----------AVIKGLTYL-RE 141
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM--IAYKSPEFLQLGRI 547
++ H +K SN+L+N E L D+G+ + A + +Y SPE LQ
Sbjct: 142 KHKIM--HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY 199
Query: 548 TKKTDVWSLGVLILEIMTGKFP 569
+ ++D+WS+G+ ++E+ G++P
Sbjct: 200 SVQSDIWSMGLSLVEMAVGRYP 221
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFK--QMNNVGREEFQEHMRRLGRLRHPNLLPLVAYY 434
LG+G G +K S +++ ++ ++ R + ++ L P ++ +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 435 YRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLI 494
Y E + E + SL L + + L K+ V KGL YL RE ++
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYL-REKHKIM 127
Query: 495 APHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM--IAYKSPEFLQLGRITKKTD 552
H +K SN+L+N E L D+G+ + A + +Y SPE LQ + ++D
Sbjct: 128 --HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 553 VWSLGVLILEIMTGKFP 569
+WS+G+ ++E+ G++P
Sbjct: 186 IWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFK--QMNNVGREEFQEHMRRLGRLRHPNLLPLVAYY 434
LG+G G +K S +++ ++ ++ R + ++ L P ++ +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 435 YRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLI 494
Y E + E + SL L + + L K+ V KGL YL RE ++
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYL-REKHKIM 127
Query: 495 APHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM--IAYKSPEFLQLGRITKKTD 552
H +K SN+L+N E L D+G+ + A + +Y SPE LQ + ++D
Sbjct: 128 --HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 553 VWSLGVLILEIMTGKFP 569
+WS+G+ ++E+ G++P
Sbjct: 186 IWSMGLSLVEMAVGRYP 202
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 375 EILGSGCFGSSYKASL----STGAMMVVKRFKQMNNVGR-EEFQEHMRRLGRLRHPNLLP 429
E++G G FG Y +L VK ++ ++G +F + HPN+L
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ R E LV K N ++ P++ + VAKG+++L
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVK--DLIGFGLQVAKGMKFL--- 147
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--------NQESAQELMIAYKSPEF 541
S H + + N +L+E +AD+GL M + ++ +L + + + E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
LQ + T K+DVWS GVL+ E+MT P
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 375 EILGSGCFGSSYKASL----STGAMMVVKRFKQMNNVGR-EEFQEHMRRLGRLRHPNLLP 429
E++G G FG Y +L VK ++ ++G +F + HPN+L
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ R E LV K N ++ P++ + VAKG+++L
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVK--DLIGFGLQVAKGMKFL--- 149
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--------NQESAQELMIAYKSPEF 541
S H + + N +L+E +AD+GL M + ++ +L + + + E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
LQ + T K+DVWS GVL+ E+MT P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 375 EILGSGCFGSSYKASL----STGAMMVVKRFKQMNNVGR-EEFQEHMRRLGRLRHPNLLP 429
E++G G FG Y +L VK ++ ++G +F + HPN+L
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ R E LV K N ++ P++ + VAKG+++L
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVK--DLIGFGLQVAKGMKFL--- 154
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--------NQESAQELMIAYKSPEF 541
S H + + N +L+E +AD+GL M + ++ +L + + + E
Sbjct: 155 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 213
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
LQ + T K+DVWS GVL+ E+MT P
Sbjct: 214 LQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFK--QMNNVGREEFQEHMRRLGRLRHPNLLPLVAYY 434
LG+G G +K S +++ ++ ++ R + ++ L P ++ +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 435 YRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLI 494
Y E + E + SL L + + L K+ V KGL YL RE ++
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYL-REKHKIM 127
Query: 495 APHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM--IAYKSPEFLQLGRITKKTD 552
H +K SN+L+N E L D+G+ + A + +Y SPE LQ + ++D
Sbjct: 128 --HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 553 VWSLGVLILEIMTGKFP 569
+WS+G+ ++E+ G++P
Sbjct: 186 IWSMGLSLVEMAVGRYP 202
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 69
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 70 LLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIP-------LPLIKS------YLFQL 115
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + Y++
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 174
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 175 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 70
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 71 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIKS------YLFQL 116
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + + Y++
Sbjct: 117 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY-THEVVTLWYRA 175
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 176 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 211
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFK--QMNNVGREEFQEHMRRLGRLRHPNLLPLVAYY 434
LG+G G +K S +++ ++ ++ R + ++ L P ++ +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 435 YRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLI 494
Y E + E + SL L + + L K+ V KGL YL RE ++
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYL-REKHKIM 127
Query: 495 APHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM--IAYKSPEFLQLGRITKKTD 552
H +K SN+L+N E L D+G+ + A + +Y SPE LQ + ++D
Sbjct: 128 --HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 553 VWSLGVLILEIMTGKFP 569
+WS+G+ ++E+ G++P
Sbjct: 186 IWSMGLSLVEMAVGRYP 202
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LGSG FG + VK K+ ++ +EF + + + +L HP L+ +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKE-GSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+ +V E++ L L H +PS L++ V +G+ +L E I
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPS----QLLEMCYDVCEGMAFL--ESHQFI-- 126
Query: 497 HGHIKSSNVLLNESLEPVLADYGLI-PVMNQESAQ----ELMIAYKSPEFLQLGRITKKT 551
H + + N L++ L ++D+G+ V++ + + + + +PE + + K+
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKS 186
Query: 552 DVWSLGVLILEIMT-GKFPAN 571
DVW+ G+L+ E+ + GK P +
Sbjct: 187 DVWAFGILMWEVFSLGKMPYD 207
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 67
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 68 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIKS------YLFQL 113
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + + Y++
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY-THEVVTLWYRA 172
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 173 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFK--QMNNVGREEFQEHMRRLGRLRHPNLLPLVAYY 434
LG+G G +K S +++ ++ ++ R + ++ L P ++ +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 435 YRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLI 494
Y E + E + SL L + + L K+ V KGL YL RE ++
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYL-REKHKIM 127
Query: 495 APHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM--IAYKSPEFLQLGRITKKTD 552
H +K SN+L+N E L D+G+ + A + +Y SPE LQ + ++D
Sbjct: 128 --HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 553 VWSLGVLILEIMTGKFP 569
+WS+G+ ++E+ G++P
Sbjct: 186 IWSMGLSLVEMAVGRYP 202
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 91/198 (45%), Gaps = 12/198 (6%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVG-REEFQEHMRRLGRLRHPNLLPLVAY 433
E++G G FG KA + + KQ+ + R+ F +R+L R+ HPN++ L Y
Sbjct: 14 EVVGRGAFGVVCKAKWRAKDVAI----KQIESESERKAFIVELRQLSRVNHPNIVKL--Y 67
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
LV E+ SL LHG + L P + ++G+ YL+ P
Sbjct: 68 GACLNPVCLVMEYAEGGSLYNVLHGAEPL--PYYTAAHAMSWCLQCSQGVAYLHSMQPKA 125
Query: 494 IAPHGHIKSSNVLLNESLEPV-LADYGL-IPVMNQESAQELMIAYKSPEFLQLGRITKKT 551
+ H +K N+LL + + D+G + + + A+ +PE + ++K
Sbjct: 126 LI-HRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKC 184
Query: 552 DVWSLGVLILEIMTGKFP 569
DV+S G+++ E++T + P
Sbjct: 185 DVFSWGIILWEVITRRKP 202
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 73
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 74 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIKS------YLFQL 119
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + + Y++
Sbjct: 120 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY-THEVVTLWYRA 178
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 179 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 214
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 98/209 (46%), Gaps = 22/209 (10%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYY 435
LG G FG YKA + TGA+ K + + E++ + L HP ++ L+ YY
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 436 RKEEKLLVHEFVPKRSL-AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLI 494
+ ++ EF P ++ A+ L + L +P + + + + + L +L+ + +I
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ-----VVCRQMLEALNFLHSK--RII 139
Query: 495 APHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL-----MIAYKSPEFLQLGRITK 549
H +K+ NVL+ + LAD+G + N ++ Q+ + +PE + +
Sbjct: 140 --HRDLKAGNVLMTLEGDIRLADFG-VSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 196
Query: 550 -----KTDVWSLGVLILEIMTGKFPANFL 573
K D+WSLG+ ++E+ + P + L
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIEPPHHEL 225
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 91/198 (45%), Gaps = 12/198 (6%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVG-REEFQEHMRRLGRLRHPNLLPLVAY 433
E++G G FG KA + + KQ+ + R+ F +R+L R+ HPN++ L Y
Sbjct: 15 EVVGRGAFGVVCKAKWRAKDVAI----KQIESESERKAFIVELRQLSRVNHPNIVKL--Y 68
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
LV E+ SL LHG + L P + ++G+ YL+ P
Sbjct: 69 GACLNPVCLVMEYAEGGSLYNVLHGAEPL--PYYTAAHAMSWCLQCSQGVAYLHSMQPKA 126
Query: 494 IAPHGHIKSSNVLLNESLEPV-LADYGL-IPVMNQESAQELMIAYKSPEFLQLGRITKKT 551
+ H +K N+LL + + D+G + + + A+ +PE + ++K
Sbjct: 127 LI-HRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKC 185
Query: 552 DVWSLGVLILEIMTGKFP 569
DV+S G+++ E++T + P
Sbjct: 186 DVFSWGIILWEVITRRKP 203
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 22/199 (11%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYY 435
LG G FG YKA + TGA+ K + + E++ + L HP ++ L+ YY
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 436 RKEEKLLVHEFVPKRSL-AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLI 494
+ ++ EF P ++ A+ L + L +P + + + + + L +L+ + +I
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ-----VVCRQMLEALNFLHSK--RII 131
Query: 495 APHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL-----MIAYKSPEFLQLGRITK 549
H +K+ NVL+ + LAD+G + N ++ Q+ + +PE + +
Sbjct: 132 --HRDLKAGNVLMTLEGDIRLADFG-VSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 188
Query: 550 -----KTDVWSLGVLILEI 563
K D+WSLG+ ++E+
Sbjct: 189 TPYDYKADIWSLGITLIEM 207
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 65
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 66 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIKS------YLFQL 111
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + + Y++
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY-THEVVTLWYRA 170
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 171 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIKS------YLFQL 112
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + + Y++
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY-THEVVTLWYRA 171
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 172 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIKS------YLFQL 112
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + + Y++
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRA 171
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 172 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 65
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 66 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIKS------YLFQL 111
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + + Y++
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRA 170
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 171 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 29/221 (13%)
Query: 375 EILGSGCFGSSY----KASLSTGAMMVVKRFKQMNNVGREEFQEHMRR----LGRLRHPN 426
++LG+G +G + + TG + +K K+ V + + EH R L +R
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 427 LLPLVAYYYRKEEKL-LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKG-VAKGLQ 484
L + Y ++ E KL L+ +++ L +L + + ++I G + L+
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTE------HEVQIYVGEIVLALE 173
Query: 485 YLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL---IPVMNQESAQEL--MIAYKSP 539
+L++ L + IK N+LL+ + VL D+GL E A + I Y +P
Sbjct: 174 HLHK----LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP 229
Query: 540 EFLQLGRI--TKKTDVWSLGVLILEIMTGKFPANFLQQGKK 578
+ ++ G K D WSLGVL+ E++TG P F G+K
Sbjct: 230 DIVRGGDSGHDKAVDWWSLGVLMYELLTGASP--FTVDGEK 268
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIKS------YLFQL 112
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + + Y++
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY-THEVVTLWYRA 171
Query: 539 PEFLQLGR--ITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 172 PEIL-LGXKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIKS------YLFQL 112
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + Y++
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 171
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 172 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 73
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 74 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIKS------YLFQL 119
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + + Y++
Sbjct: 120 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY-THEVVTLWYRA 178
Query: 539 PEFLQLGR--ITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 179 PEIL-LGXKYYSTAVDIWSLGCIFAEMVTRRALFPGD 214
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 107/223 (47%), Gaps = 36/223 (16%)
Query: 377 LGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGR----EEFQEHMRR---LGRLRHPNLL 428
+G G FG +K L +++ +K ++ G E+FQE R + L HPN++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPS-LDWPSRLKIVKGVAKGLQYLY 487
L + +V EFVP L H+ L + + W +L+++ +A G++Y+
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLY-----HRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 488 RELPSLIAPHGHIKSSNVLLNESLE---PV---LADYGLIPVMNQESAQELM-----IAY 536
+ P ++ H ++S N+ L +SL+ PV +AD+G +Q+S + +
Sbjct: 140 NQNPPIV--HRDLRSPNIFL-QSLDENAPVCAKVADFG----TSQQSVHSVSGLLGNFQW 192
Query: 537 KSPEFL--QLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGK 577
+PE + + T+K D +S +++ I+TG+ P + GK
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK 235
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 27/210 (12%)
Query: 376 ILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN--VGREEFQEHMRRLGRLRHPNLLPLVA 432
++G G +G K + TG ++ +K+F + ++ + ++ ++ L +LRH NL+ L+
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
+K+ LV EFV L L LD+ K + + G+ + + +
Sbjct: 92 VCKKKKRWYLVFEFVDHTIL-----DDLELFPNGLDYQVVQKYLFQIINGIGFCHSH--N 144
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLI-------PVMNQESAQELMIAYKSPEFLQLG 545
+I H IK N+L+++S L D+G V + E A Y++PE L +G
Sbjct: 145 II--HRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRW---YRAPELL-VG 198
Query: 546 RIT--KKTDVWSLGVLILEIMTGK--FPAN 571
+ K DVW++G L+ E+ G+ FP +
Sbjct: 199 DVKYGKAVDVWAIGCLVTEMFMGEPLFPGD 228
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 65
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV E V + L + G P L ++K YL++
Sbjct: 66 LLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIP-------LPLIKS------YLFQL 111
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + + Y++
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY-THEVVTLWYRA 170
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 171 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIKS------YLFQL 112
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + + Y++
Sbjct: 113 LQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRA 171
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 172 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIKS------YLFQL 112
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + Y++
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 171
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 172 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 69
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 70 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIKS------YLFQL 115
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + Y++
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 174
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 175 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIKS------YLFQL 112
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + Y++
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 171
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 172 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 65
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 66 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIKS------YLFQL 111
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + Y++
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 170
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 171 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 25/206 (12%)
Query: 374 AEILGSGCFGSSYKAS-LSTGAMMVVK-RFKQMNNV----GREEFQEHMRRLGRLRHPNL 427
++LGSG FG+ YK + G + + K +N EF + + + HP+L
Sbjct: 20 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 79
Query: 428 LPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQA-LG-QPSLDWPSRLKIVKGVAKGLQY 485
+ L+ +L V + +P L +H H+ +G Q L+W + +AKG+ Y
Sbjct: 80 VRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMY 132
Query: 486 LYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQ------ELMIAYKSP 539
L E L+ H + + NVL+ + D+GL ++ + + ++ I + +
Sbjct: 133 L--EERRLV--HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMAL 188
Query: 540 EFLQLGRITKKTDVWSLGVLILEIMT 565
E + + T ++DVWS GV I E+MT
Sbjct: 189 ECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 68
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 69 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIKS------YLFQL 114
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + Y++
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 173
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 174 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIKS------YLFQL 112
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + Y++
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 171
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 172 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 67
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 68 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIKS------YLFQL 113
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + Y++
Sbjct: 114 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 172
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 173 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 91/200 (45%), Gaps = 15/200 (7%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
E +G G G+ Y A ++TG + +++ +E + + ++PN++ +
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
Y +E +V E++ SL + + +D + + + L++L+ S
Sbjct: 87 YLVGDELWVVMEYLAGGSLT------DVVTETCMDEGQIAAVCRECLQALEFLH----SN 136
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGLIP-VMNQESAQELMIA---YKSPEFLQLGRITK 549
H +IKS N+LL L D+G + ++S + M+ + +PE +
Sbjct: 137 QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP 196
Query: 550 KTDVWSLGVLILEIMTGKFP 569
K D+WSLG++ +E++ G+ P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 23/210 (10%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVG----REEFQEHMRRLGRL-RHPNLLP 429
+++G G FG KA + + + K+M +F + L +L HPN++
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQAL-----------GQPSLDWPSRLKIVKG 478
L+ + L E+ P +L L + L +L L
Sbjct: 88 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI---PVMNQESAQELMIA 535
VA+G+ YL ++ I H ++ + N+L+ E+ +AD+GL V +++ L +
Sbjct: 148 VARGMDYLSQK--QFI--HRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR 203
Query: 536 YKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + E L T +DVWS GVL+ EI++
Sbjct: 204 WMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 67
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 68 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIKS------YLFQL 113
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + Y++
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 172
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 173 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 67
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 68 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIKS------YLFQL 113
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + Y++
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 172
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 173 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 65
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 66 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIKS------YLFQL 111
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + Y++
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 170
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 171 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 70
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 71 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIKS------YLFQL 116
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + Y++
Sbjct: 117 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 175
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 176 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 211
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 69
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 70 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIKS------YLFQL 115
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + Y++
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 174
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 175 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 68
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 69 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIKS------YLFQL 114
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + Y++
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 173
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 174 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 68
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 69 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIKS------YLFQL 114
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + Y++
Sbjct: 115 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 173
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 174 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
E +G G G+ Y A ++TG + +++ +E + + ++PN++ +
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
Y +E +V E++ SL + + +D + + + L++L+ S
Sbjct: 86 YLVGDELWVVMEYLAGGSLT------DVVTETCMDEGQIAAVCRECLQALEFLH----SN 135
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGLIP-VMNQESAQELMIA---YKSPEFLQLGRITK 549
H IKS N+LL L D+G + ++S + M+ + +PE +
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP 195
Query: 550 KTDVWSLGVLILEIMTGKFP 569
K D+WSLG++ +E++ G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 107/223 (47%), Gaps = 36/223 (16%)
Query: 377 LGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGR----EEFQEHMRR---LGRLRHPNLL 428
+G G FG +K L +++ +K ++ G E+FQE R + L HPN++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPS-LDWPSRLKIVKGVAKGLQYLY 487
L + +V EFVP L H+ L + + W +L+++ +A G++Y+
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLY-----HRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 488 RELPSLIAPHGHIKSSNVLLNESLE---PV---LADYGLIPVMNQESAQELM-----IAY 536
+ P ++ H ++S N+ L +SL+ PV +AD+ L +Q+S + +
Sbjct: 140 NQNPPIV--HRDLRSPNIFL-QSLDENAPVCAKVADFSL----SQQSVHSVSGLLGNFQW 192
Query: 537 KSPEFL--QLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGK 577
+PE + + T+K D +S +++ I+TG+ P + GK
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK 235
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIP-------LPLIKS------YLFQL 112
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + Y++
Sbjct: 113 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 171
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 172 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
E +G G G+ Y A ++TG + +++ +E + + ++PN++ +
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
Y +E +V E++ SL + + +D + + + L++L+ S
Sbjct: 87 YLVGDELWVVMEYLAGGSLT------DVVTETCMDEGQIAAVCRECLQALEFLH----SN 136
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGLIP-VMNQESAQELMIA---YKSPEFLQLGRITK 549
H IKS N+LL L D+G + ++S + M+ + +PE +
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGP 196
Query: 550 KTDVWSLGVLILEIMTGKFP 569
K D+WSLG++ +E++ G+ P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
E +G G G+ Y A ++TG + +++ +E + + ++PN++ +
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
Y +E +V E++ SL + + +D + + + L++L+ S
Sbjct: 86 YLVGDELWVVMEYLAGGSLT------DVVTETCMDEGQIAAVCRECLQALEFLH----SN 135
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGLIP-VMNQESAQELMIA---YKSPEFLQLGRITK 549
H IKS N+LL L D+G + ++S + M+ + +PE +
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGP 195
Query: 550 KTDVWSLGVLILEIMTGKFP 569
K D+WSLG++ +E++ G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 38/215 (17%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQE-HMRRLGRLRHPNLLPLVAY 433
E +G G +G ++ S G + VK F + + F+E + LRH N+L +A
Sbjct: 43 ECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDE--KSWFRETELYNTVMLRHENILGFIAS 99
Query: 434 ----YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
+ + L+ + SL + L +LD S L+IV +A GL +L+ E
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSL------YDYLQLTTLDTVSCLRIVLSIASGLAHLHIE 153
Query: 490 L------PSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-------- 535
+ P++ H +KS N+L+ ++ + +AD GL VM+ +S +L +
Sbjct: 154 IFGTQGKPAI--AHRDLKSKNILVKKNGQCCIADLGL-AVMHSQSTNQLDVGNNPRVGTK 210
Query: 536 -YKSPEFL----QLGRI--TKKTDVWSLGVLILEI 563
Y +PE L Q+ K+ D+W+ G+++ E+
Sbjct: 211 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 28/217 (12%)
Query: 377 LGSGCFGS-----SYKASLSTGAMMV-VKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL 430
LG G FG Y S + M+V VK K R++FQ L L+H +++
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 431 VAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQAL----GQP-----SLDWPSRLKIVKGV 479
+ ++V E++ L + HG A+ GQP L L I +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 480 AKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL------IPVMNQESAQELM 533
A G+ YL S H + + N L+ +L + D+G+ L
Sbjct: 143 ASGMVYL----ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 534 IAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFP 569
I + PE + + T ++DVWS GV++ EI T GK P
Sbjct: 199 IRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 23/210 (10%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVG----REEFQEHMRRLGRL-RHPNLLP 429
+++G G FG KA + + + K+M +F + L +L HPN++
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQAL-----------GQPSLDWPSRLKIVKG 478
L+ + L E+ P +L L + L +L L
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI---PVMNQESAQELMIA 535
VA+G+ YL ++ I H + + N+L+ E+ +AD+GL V +++ L +
Sbjct: 141 VARGMDYLSQK--QFI--HRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR 196
Query: 536 YKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + E L T +DVWS GVL+ EI++
Sbjct: 197 WMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 23/210 (10%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVG----REEFQEHMRRLGRL-RHPNLLP 429
+++G G FG KA + + + K+M +F + L +L HPN++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQAL-----------GQPSLDWPSRLKIVKG 478
L+ + L E+ P +L L + L +L L
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI---PVMNQESAQELMIA 535
VA+G+ YL ++ I H + + N+L+ E+ +AD+GL V +++ L +
Sbjct: 151 VARGMDYLSQK--QFI--HRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR 206
Query: 536 YKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + E L T +DVWS GVL+ EI++
Sbjct: 207 WMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 25/206 (12%)
Query: 374 AEILGSGCFGSSYKAS-LSTGAMMVVK-RFKQMNNV----GREEFQEHMRRLGRLRHPNL 427
++LGSG FG+ YK + G + + K +N EF + + + HP+L
Sbjct: 43 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 102
Query: 428 LPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQ-ALG-QPSLDWPSRLKIVKGVAKGLQY 485
+ L+ +L V + +P L +H H+ +G Q L+W + +AKG+ Y
Sbjct: 103 VRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMY 155
Query: 486 LYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQ------ELMIAYKSP 539
L E L+ H + + NVL+ + D+GL ++ + + ++ I + +
Sbjct: 156 L--EERRLV--HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMAL 211
Query: 540 EFLQLGRITKKTDVWSLGVLILEIMT 565
E + + T ++DVWS GV I E+MT
Sbjct: 212 ECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 104/226 (46%), Gaps = 26/226 (11%)
Query: 351 EIKLSFVRDDVERFDLHDLLRASAEILGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGR 409
EIK V D +D+H E LG+G FG ++ + +TG K + +
Sbjct: 149 EIKHDHVLD---HYDIH-------EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK 198
Query: 410 EEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHG-HQALGQPSLD 468
E ++ ++ + LRHP L+ L + E ++++EF+ L + H + +
Sbjct: 199 ETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEA- 257
Query: 469 WPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN--ESLEPVLADYGLIPVMNQ 526
++ ++ V KGL +++ + + H +K N++ S E L D+GL ++
Sbjct: 258 ----VEYMRQVCKGLCHMHEN--NYV--HLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309
Query: 527 ESAQELMIA---YKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFP 569
+ + ++ + +PE + + TD+WS+GVL +++G P
Sbjct: 310 KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 67
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ L + G P L ++K YL++
Sbjct: 68 LLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIP-------LPLIKS------YLFQL 113
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + Y++
Sbjct: 114 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 172
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 173 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 89/214 (41%), Gaps = 28/214 (13%)
Query: 376 ILGSGCFGSSYKASLSTG-------AMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLL 428
ILG G FG Y+ + A+ K+ ++N +E+F + L HP+++
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDN--KEKFMSEAVIMKNLDHPHIV 88
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL-- 486
L+ +E ++ E P L L ++ + LK++ V LQ
Sbjct: 89 KLIGII-EEEPTWIIMELYPYGELGHYLERNK----------NSLKVLTLVLYSLQICKA 137
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE-----SAQELMIAYKSPEF 541
L S+ H I N+L+ L D+GL + E S L I + SPE
Sbjct: 138 MAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES 197
Query: 542 LQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQ 574
+ R T +DVW V + EI++ GK P +L+
Sbjct: 198 INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE 231
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 89/214 (41%), Gaps = 28/214 (13%)
Query: 376 ILGSGCFGSSYKASLSTG-------AMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLL 428
ILG G FG Y+ + A+ K+ ++N +E+F + L HP+++
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDN--KEKFMSEAVIMKNLDHPHIV 72
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL-- 486
L+ +E ++ E P L L ++ + LK++ V LQ
Sbjct: 73 KLIGII-EEEPTWIIMELYPYGELGHYLERNK----------NSLKVLTLVLYSLQICKA 121
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE-----SAQELMIAYKSPEF 541
L S+ H I N+L+ L D+GL + E S L I + SPE
Sbjct: 122 MAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES 181
Query: 542 LQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQ 574
+ R T +DVW V + EI++ GK P +L+
Sbjct: 182 INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE 215
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 89/214 (41%), Gaps = 28/214 (13%)
Query: 376 ILGSGCFGSSYKASLSTG-------AMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLL 428
ILG G FG Y+ + A+ K+ ++N +E+F + L HP+++
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDN--KEKFMSEAVIMKNLDHPHIV 76
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL-- 486
L+ +E ++ E P L L ++ + LK++ V LQ
Sbjct: 77 KLIGII-EEEPTWIIMELYPYGELGHYLERNK----------NSLKVLTLVLYSLQICKA 125
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE-----SAQELMIAYKSPEF 541
L S+ H I N+L+ L D+GL + E S L I + SPE
Sbjct: 126 MAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES 185
Query: 542 LQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQ 574
+ R T +DVW V + EI++ GK P +L+
Sbjct: 186 INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE 219
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 69
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ L + G P L ++K YL++
Sbjct: 70 LLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIP-------LPLIKS------YLFQL 115
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + Y++
Sbjct: 116 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 174
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 175 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 99/230 (43%), Gaps = 25/230 (10%)
Query: 373 SAEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN------VGREEFQEHMRRLGRLRHP 425
+ E LGSG F K STG K K+ V RE+ + + L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 426 NLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQY 485
N++ L Y K + +L+ E V L L ++L + + +K + G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-----EFLKQILNGVYY 129
Query: 486 LYRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGL---IPVMNQESAQELMIAYKS 538
L+ SL H +K N++L + P + D+GL I N+ A+ +
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVA 185
Query: 539 PEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVN 588
PE + + + D+WS+GV+ +++G P FL K+ S VN
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQETLANVSAVN 233
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 68
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ L + G P L ++K YL++
Sbjct: 69 LLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIP-------LPLIKS------YLFQL 114
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + Y++
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 173
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 174 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 69
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ L + G P L ++K YL++
Sbjct: 70 LLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIP-------LPLIKS------YLFQL 115
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + Y++
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 174
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 175 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
E +G G G+ Y A ++TG + +++ +E + + ++PN++ +
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
Y +E +V E++ SL + + +D + + + L++L+ S
Sbjct: 86 YLVGDELWVVMEYLAGGSLT------DVVTETCMDEGQIAAVCRECLQALEFLH----SN 135
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGLIP-VMNQESAQELMIA---YKSPEFLQLGRITK 549
H IKS N+LL L D+G + ++S + M+ + +PE +
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGP 195
Query: 550 KTDVWSLGVLILEIMTGKFP 569
K D+WSLG++ +E++ G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 88/209 (42%), Gaps = 23/209 (11%)
Query: 374 AEILGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLP 429
+++G G FG +K++ AM ++ +F+ + F E + P ++
Sbjct: 74 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ 133
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L + +V E++P L + + + + + + + + + +++R+
Sbjct: 134 LFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRD 193
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-----YKSPEFLQL 544
+K N+LL++S LAD+G MN+E A Y SPE L+
Sbjct: 194 ----------VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 243
Query: 545 ----GRITKKTDVWSLGVLILEIMTGKFP 569
G ++ D WS+GV + E++ G P
Sbjct: 244 QGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 38/215 (17%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQE-HMRRLGRLRHPNLLPLVAY 433
E +G G +G ++ S G + VK F + + F+E + LRH N+L +A
Sbjct: 14 ECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDE--KSWFRETELYNTVMLRHENILGFIAS 70
Query: 434 ----YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
+ + L+ + SL + L +LD S L+IV +A GL +L+ E
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSL------YDYLQLTTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 490 L------PSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-------- 535
+ P++ H +KS N+L+ ++ + +AD GL VM+ +S +L +
Sbjct: 125 IFGTQGKPAI--AHRDLKSKNILVKKNGQCCIADLGL-AVMHSQSTNQLDVGNNPRVGTK 181
Query: 536 -YKSPEFL----QLGRI--TKKTDVWSLGVLILEI 563
Y +PE L Q+ K+ D+W+ G+++ E+
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 102/226 (45%), Gaps = 26/226 (11%)
Query: 351 EIKLSFVRDDVERFDLHDLLRASAEILGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGR 409
EIK V D +D+H E LG+G FG ++ + +TG K + +
Sbjct: 43 EIKHDHVLD---HYDIH-------EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK 92
Query: 410 EEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHG-HQALGQPSLD 468
E ++ ++ + LRHP L+ L + E ++++EF+ L + H + +
Sbjct: 93 ETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEA- 151
Query: 469 WPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN--ESLEPVLADYGLIPVMNQ 526
++ ++ V KGL +++ H +K N++ S E L D+GL ++
Sbjct: 152 ----VEYMRQVCKGLCHMHEN----NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 203
Query: 527 ESAQELMIA---YKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFP 569
+ + ++ + +PE + + TD+WS+GVL +++G P
Sbjct: 204 KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 13/110 (11%)
Query: 470 PSRL--KIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE 527
P R+ K+ + K L YL +E +I H +K SN+LL+E + L D+G+ + +
Sbjct: 122 PERILGKMTVAIVKALYYL-KEKHGVI--HRDVKPSNILLDERGQIKLCDFGISGRLVDD 178
Query: 528 SAQEL---MIAYKSPEFLQLGRITK-----KTDVWSLGVLILEIMTGKFP 569
A++ AY +PE + TK + DVWSLG+ ++E+ TG+FP
Sbjct: 179 KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 88/209 (42%), Gaps = 23/209 (11%)
Query: 374 AEILGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLP 429
+++G G FG +K++ AM ++ +F+ + F E + P ++
Sbjct: 79 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ 138
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L + +V E++P L + + + + + + + + + +++R+
Sbjct: 139 LFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRD 198
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-----YKSPEFLQL 544
+K N+LL++S LAD+G MN+E A Y SPE L+
Sbjct: 199 ----------VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 248
Query: 545 ----GRITKKTDVWSLGVLILEIMTGKFP 569
G ++ D WS+GV + E++ G P
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ + + + + V +E + L L HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIKS------YLFQL 112
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + + Y++
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRA 171
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 172 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ + + + + V +E + L L HPN++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 65
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV EF+ + L + G P L ++K YL++
Sbjct: 66 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIKS------YLFQL 111
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + + Y++
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRA 170
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 171 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 88/209 (42%), Gaps = 23/209 (11%)
Query: 374 AEILGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLP 429
+++G G FG +K++ AM ++ +F+ + F E + P ++
Sbjct: 79 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ 138
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L + +V E++P L + + + + + + + + + +++R+
Sbjct: 139 LFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRD 198
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-----YKSPEFLQL 544
+K N+LL++S LAD+G MN+E A Y SPE L+
Sbjct: 199 ----------VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 248
Query: 545 ----GRITKKTDVWSLGVLILEIMTGKFP 569
G ++ D WS+GV + E++ G P
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 38/215 (17%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQE-HMRRLGRLRHPNLLPLVAY 433
E +G G +G ++ S G + VK F + + F+E + LRH N+L +A
Sbjct: 14 ECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDE--KSWFRETELYNTVMLRHENILGFIAS 70
Query: 434 ----YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
+ + L+ + SL + L +LD S L+IV +A GL +L+ E
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSL------YDYLQLTTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 490 L------PSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-------- 535
+ P++ H +KS N+L+ ++ + +AD GL VM+ +S +L +
Sbjct: 125 IFGTQGKPAI--AHRDLKSKNILVKKNGQCCIADLGL-AVMHSQSTNQLDVGNNPRVGTK 181
Query: 536 -YKSPEFL----QLGRI--TKKTDVWSLGVLILEI 563
Y +PE L Q+ K+ D+W+ G+++ E+
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 29/232 (12%)
Query: 373 SAEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN------VGREEFQEHMRRLGRLRHP 425
+ E LGSG F K STG K K+ V RE+ + + L ++HP
Sbjct: 15 TGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 426 NLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQY 485
N++ L Y K + +L+ E V L L ++L + + +K + G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-----EEATEFLKQILNGVYY 129
Query: 486 LYRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGLIPVMNQESAQELMIAYKSPEF 541
L+ SL H +K N++L + P + D+GL ++ E + +PEF
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID--FGNEFKNIFGTPEF 183
Query: 542 LQLGRITK-----KTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVN 588
+ + + D+WS+GV+ +++G P FL K+ S VN
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQETLANVSAVN 233
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 109/250 (43%), Gaps = 35/250 (14%)
Query: 355 SFVRDDVERFDLHDLLRASAEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMN------NV 407
+F ++DVE D +++ E LGSG F K TG K K+ V
Sbjct: 4 TFRQEDVE--DHYEM----GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGV 57
Query: 408 GREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSL 467
REE + + L +RHPN++ L + K + +L+ E V L L ++L +
Sbjct: 58 SREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEA 117
Query: 468 DWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGLIPV 523
+ +K + G+ YL+ S H +K N++L + P L D+G+
Sbjct: 118 T-----QFLKQILDGVHYLH----SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 168
Query: 524 MNQESAQELMIAYKSPEFLQLGRITK-----KTDVWSLGVLILEIMTGKFPANFLQQGKK 578
+ E+ E + +PEF+ + + D+WS+GV+ +++G P FL + K+
Sbjct: 169 I--EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP--FLGETKQ 224
Query: 579 ADGDLASWVN 588
S VN
Sbjct: 225 ETLTNISAVN 234
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 25/233 (10%)
Query: 376 ILGSG----CFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
LG G CF S + A +V + + RE+ + L H +++
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGH-QALGQPSLDWPSRLKIVKGVAKGLQYLYREL 490
++ + +V E +RSL + LH +AL +P + ++ + G QYL+R
Sbjct: 106 GFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARY-----YLRQIVLGCQYLHRNR 159
Query: 491 PSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGR 546
H +K N+ LNE LE + D+GL + + ++ ++ Y +PE L
Sbjct: 160 ----VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG 215
Query: 547 ITKKTDVWSLGVLILEIMTGK--FPANFLQQG----KKADGDLASWVNSVLAN 593
+ + DVWS+G ++ ++ GK F + L++ KK + + +N V A+
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAAS 268
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 25/233 (10%)
Query: 376 ILGSG----CFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
LG G CF S + A +V + + RE+ + L H +++
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGH-QALGQPSLDWPSRLKIVKGVAKGLQYLYREL 490
++ + +V E +RSL + LH +AL +P + ++ + G QYL+R
Sbjct: 108 GFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARY-----YLRQIVLGCQYLHRNR 161
Query: 491 PSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGR 546
H +K N+ LNE LE + D+GL + + ++ ++ Y +PE L
Sbjct: 162 ----VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG 217
Query: 547 ITKKTDVWSLGVLILEIMTGK--FPANFLQQG----KKADGDLASWVNSVLAN 593
+ + DVWS+G ++ ++ GK F + L++ KK + + +N V A+
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAAS 270
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 36/217 (16%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFK---QMNNVGREEFQEHMRRLGRLRHPNLLP 429
E +G G +G YKA + TG ++ +K+ + + V +E + L L HPN++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 69
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L+ + + + LV E V + L + G P L ++K YL++
Sbjct: 70 LLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIP-------LPLIKS------YLFQL 115
Query: 490 LPSLIAPHGH------IKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKS 538
L L H H +K N+L+N LAD+GL +PV + + + Y++
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 174
Query: 539 PEFLQLG--RITKKTDVWSLGVLILEIMTGK--FPAN 571
PE L LG + D+WSLG + E++T + FP +
Sbjct: 175 PEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 373 SAEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN------VGREEFQEHMRRLGRLRHP 425
+ E LGSG F K STG K K+ V RE+ + + L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 426 NLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQY 485
N++ L Y K + +L+ E V L L ++L + + +K + G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-----EEATEFLKQILNGVYY 129
Query: 486 LYRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGLIPVMNQESAQELMIAYKSPEF 541
L+ SL H +K N++L + P + D+GL ++ E + +PEF
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID--FGNEFKNIFGTPEF 183
Query: 542 LQLGRITK-----KTDVWSLGVLILEIMTGKFP 569
+ + + D+WS+GV+ +++G P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 98/227 (43%), Gaps = 22/227 (9%)
Query: 376 ILGSGCFGSSYKA-SLSTGAMMVVKRF--KQMNNVGR-EEFQEHMRRLGRLRHPNLLPLV 431
+LG G F Y+A S+ TG + +K K M G + Q ++ +L+HP++L L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
Y+ LV E + L +P + +R + + G+ YL+
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYLKNRV---KPFSENEAR-HFMHQIITGMLYLH---- 129
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRI 547
S H + SN+LL ++ +AD+GL + + + Y SPE
Sbjct: 130 SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAH 189
Query: 548 TKKTDVWSLGVLILEIMTGKFP------ANFLQQGKKADGDLASWVN 588
++DVWSLG + ++ G+ P N L + AD ++ S+++
Sbjct: 190 GLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLS 236
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 25/233 (10%)
Query: 376 ILGSG----CFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
LG G CF S + A +V + + RE+ + L H +++
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGH-QALGQPSLDWPSRLKIVKGVAKGLQYLYREL 490
++ + +V E +RSL + LH +AL +P + ++ + G QYL+R
Sbjct: 82 GFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARY-----YLRQIVLGCQYLHRNR 135
Query: 491 PSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGR 546
H +K N+ LNE LE + D+GL + + ++ ++ Y +PE L
Sbjct: 136 ----VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG 191
Query: 547 ITKKTDVWSLGVLILEIMTGK--FPANFLQQG----KKADGDLASWVNSVLAN 593
+ + DVWS+G ++ ++ GK F + L++ KK + + +N V A+
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAAS 244
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 89/227 (39%), Gaps = 27/227 (11%)
Query: 377 LGSGCFGSSYKASLST------GAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL 430
LG G FG + A ++ VK K+ + R++FQ L L+H +++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 431 VAYYYRKEEKLLVHEFVPKRSL----------AVNLHGHQALGQPSLDWPSRLKIVKGVA 480
L+V E++ L A L G + + L L + VA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 481 KGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQE------LMI 534
G+ YL L H + + N L+ + L + D+G+ + L I
Sbjct: 140 AGMVYL----AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 535 AYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKAD 580
+ PE + + T ++DVWS GV++ EI T GK P L + D
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID 242
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRR---LGRLRHPNLLPL 430
+ILG G F ++ A L+T +K ++ + + + R + RL HP + L
Sbjct: 36 KILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVN---LHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ ++ +EKL S A N L + +G S D + L+YL+
Sbjct: 96 Y-FTFQDDEKLYF-----GLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 147
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL------MIAYKSPEF 541
+ +I H +K N+LLNE + + D+G V++ ES Q Y SPE
Sbjct: 148 GK--GII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 542 LQLGRITKKTDVWSLGVLILEIMTG 566
L K +D+W+LG +I +++ G
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 29/232 (12%)
Query: 373 SAEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN------VGREEFQEHMRRLGRLRHP 425
+ E LGSG F K STG K K+ V RE+ + + L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 426 NLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQY 485
N++ L Y K + +L+ E V L L ++L + + +K + G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-----EFLKQILNGVYY 129
Query: 486 LYRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGLIPVMNQESAQELMIAYKSPEF 541
L+ SL H +K N++L + P + D+GL ++ E + +PEF
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID--FGNEFKNIFGTPEF 183
Query: 542 LQLGRITK-----KTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVN 588
+ + + D+WS+GV+ +++G P FL K+ S VN
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQETLANVSAVN 233
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 85/216 (39%), Gaps = 27/216 (12%)
Query: 377 LGSGCFGSSYKASLST------GAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL 430
LG G FG + A ++ VK K+ + R++FQ L L+H +++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 431 VAYYYRKEEKLLVHEFVPKRSL----------AVNLHGHQALGQPSLDWPSRLKIVKGVA 480
L+V E++ L A L G + + L L + VA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 481 KGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL------IPVMNQESAQELMI 534
G+ YL L H + + N L+ + L + D+G+ L I
Sbjct: 169 AGMVYL----AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 535 AYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFP 569
+ PE + + T ++DVWS GV++ EI T GK P
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 89/227 (39%), Gaps = 27/227 (11%)
Query: 377 LGSGCFGSSYKASLST------GAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL 430
LG G FG + A ++ VK K+ + R++FQ L L+H +++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 431 VAYYYRKEEKLLVHEFVPKRSL----------AVNLHGHQALGQPSLDWPSRLKIVKGVA 480
L+V E++ L A L G + + L L + VA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 481 KGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQE------LMI 534
G+ YL L H + + N L+ + L + D+G+ + L I
Sbjct: 146 AGMVYL----AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 535 AYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKAD 580
+ PE + + T ++DVWS GV++ EI T GK P L + D
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID 248
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG+G FG + +K K+ ++ +EF E + + L H L+ L +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+ ++ E++ L L + Q L++ K V + ++YL S
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKDVCEAMEYL----ESKQFL 142
Query: 497 HGHIKSSNVLLNESLEPVLADYGLI-PVMNQESAQ----ELMIAYKSPEFLQLGRITKKT 551
H + + N L+N+ ++D+GL V++ E + + + PE L + + K+
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 552 DVWSLGVLILEIMT-GKFPANFLQQGKKAD 580
D+W+ GVL+ EI + GK P + A+
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYERFTNSETAE 232
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 29/232 (12%)
Query: 373 SAEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN------VGREEFQEHMRRLGRLRHP 425
+ E LGSG F K STG K K+ V RE+ + + L ++HP
Sbjct: 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 426 NLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQY 485
N++ L Y K + +L+ E V L L ++L + + +K + G+ Y
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-----EEATEFLKQILNGVYY 128
Query: 486 LYRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGLIPVMNQESAQELMIAYKSPEF 541
L+ SL H +K N++L + P + D+GL ++ E + +PEF
Sbjct: 129 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID--FGNEFKNIFGTPEF 182
Query: 542 LQLGRITK-----KTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVN 588
+ + + D+WS+GV+ +++G P FL K+ S VN
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQETLANVSAVN 232
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 25/233 (10%)
Query: 376 ILGSG----CFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
LG G CF S + A +V + + RE+ + L H +++
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGH-QALGQPSLDWPSRLKIVKGVAKGLQYLYREL 490
++ + +V E +RSL + LH +AL +P + ++ + G QYL+R
Sbjct: 88 GFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARY-----YLRQIVLGCQYLHRNR 141
Query: 491 PSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGR 546
H +K N+ LNE LE + D+GL + + ++ + Y +PE L
Sbjct: 142 ----VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKG 197
Query: 547 ITKKTDVWSLGVLILEIMTGK--FPANFLQQG----KKADGDLASWVNSVLAN 593
+ + DVWS+G ++ ++ GK F + L++ KK + + +N V A+
Sbjct: 198 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAAS 250
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 29/232 (12%)
Query: 373 SAEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN------VGREEFQEHMRRLGRLRHP 425
+ E LGSG F K STG K K+ V RE+ + + L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 426 NLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQY 485
N++ L Y K + +L+ E V L L ++L + + +K + G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-----EEATEFLKQILNGVYY 129
Query: 486 LYRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGLIPVMNQESAQELMIAYKSPEF 541
L+ SL H +K N++L + P + D+GL ++ E + +PEF
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID--FGNEFKNIFGTPEF 183
Query: 542 LQLGRITK-----KTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVN 588
+ + + D+WS+GV+ +++G P FL K+ S VN
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQETLANVSAVN 233
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 25/233 (10%)
Query: 376 ILGSG----CFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
LG G CF S + A +V + + RE+ + L H +++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGH-QALGQPSLDWPSRLKIVKGVAKGLQYLYREL 490
++ + +V E +RSL + LH +AL +P + ++ + G QYL+R
Sbjct: 84 GFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARY-----YLRQIVLGCQYLHRNR 137
Query: 491 PSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGR 546
H +K N+ LNE LE + D+GL + + ++ + Y +PE L
Sbjct: 138 ----VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKG 193
Query: 547 ITKKTDVWSLGVLILEIMTGK--FPANFLQQG----KKADGDLASWVNSVLAN 593
+ + DVWS+G ++ ++ GK F + L++ KK + + +N V A+
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAAS 246
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 36/238 (15%)
Query: 351 EIKLSFVRDDVERFDLHDLLRASAEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVG- 408
EI LS +RD F+L E++G+G +G YK + TG + +K M+ G
Sbjct: 13 EIDLSALRDPAGIFEL-------VELVGNGTYGQVYKGRHVKTGQLAAIK---VMDVTGD 62
Query: 409 -REEFQEHMRRLGRL-RHPNLLPLVAYYYRK------EEKLLVHEFVPKRSLAVNLHGHQ 460
EE ++ + L + H N+ + +K ++ LV EF S+ +L +
Sbjct: 63 EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSV-TDLIKNT 121
Query: 461 ALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL 520
+W + I + + +GL +L++ H IK NVLL E+ E L D+G+
Sbjct: 122 KGNTLKEEWIAY--ICREILRGLSHLHQHK----VIHRDIKGQNVLLTENAEVKLVDFGV 175
Query: 521 IPVMNQESAQELMIA----YKSPEFLQL-----GRITKKTDVWSLGVLILEIMTGKFP 569
+++ + + +PE + K+D+WSLG+ +E+ G P
Sbjct: 176 SAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRR---LGRLRHPNLLPL 430
+ILG G F + A L+T +K ++ + + + R + RL HP + L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVN---LHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ ++ +EKL S A N L + +G S D + L+YL+
Sbjct: 96 Y-FTFQDDEKLYF-----GLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 147
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA------YKSPEF 541
+ +I H +K N+LLNE + + D+G V++ ES Q A Y SPE
Sbjct: 148 GK--GII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPEL 203
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
L K +D+W+LG +I +++ G P
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 25/233 (10%)
Query: 376 ILGSG----CFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
LG G CF S + A +V + + RE+ + L H +++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGH-QALGQPSLDWPSRLKIVKGVAKGLQYLYREL 490
++ + +V E +RSL + LH +AL +P + ++ + G QYL+R
Sbjct: 84 GFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARY-----YLRQIVLGCQYLHRNR 137
Query: 491 PSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGR 546
H +K N+ LNE LE + D+GL + + ++ + Y +PE L
Sbjct: 138 ----VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKG 193
Query: 547 ITKKTDVWSLGVLILEIMTGK--FPANFLQQG----KKADGDLASWVNSVLAN 593
+ + DVWS+G ++ ++ GK F + L++ KK + + +N V A+
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAAS 246
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 373 SAEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN------VGREEFQEHMRRLGRLRHP 425
+ E LGSG F K STG K K+ V RE+ + + L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 426 NLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQY 485
N++ L Y K + +L+ E V L L ++L + + +K + G+ Y
Sbjct: 75 NVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTE-----EEATEFLKQILNGVYY 129
Query: 486 LYRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGLIPVMNQESAQELMIAYKSPEF 541
L+ SL H +K N++L + P + D+GL ++ E + +PEF
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID--FGNEFKNIFGTPEF 183
Query: 542 LQLGRITK-----KTDVWSLGVLILEIMTGKFP 569
+ + + D+WS+GV+ +++G P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 16/214 (7%)
Query: 370 LRASAEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEF--QEHMRRLGRLRHPNL 427
L E +G G FG +K + +V + + E Q+ + L + P +
Sbjct: 23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 82
Query: 428 LPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
Y + + ++ E++ S A++L L LD I++ + KGL YL+
Sbjct: 83 TKYYGSYLKDTKLWIIMEYLGGGS-ALDL-----LEPGPLDETQIATILREILKGLDYLH 136
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQ 543
E H IK++NVLL+E E LAD+G+ + + + +PE ++
Sbjct: 137 SEKKI----HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIK 192
Query: 544 LGRITKKTDVWSLGVLILEIMTGKFPANFLQQGK 577
K D+WSLG+ +E+ G+ P + L K
Sbjct: 193 QSAYDSKADIWSLGITAIELARGEPPHSELHPMK 226
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 373 SAEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN------VGREEFQEHMRRLGRLRHP 425
+ E LGSG F K STG K K+ V RE+ + + L ++HP
Sbjct: 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 426 NLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQY 485
N++ L Y K + +L+ E V L L ++L + + +K + G+ Y
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-----EEATEFLKQILNGVYY 128
Query: 486 LYRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGLIPVMNQESAQELMIAYKSPEF 541
L+ SL H +K N++L + P + D+GL ++ E + +PEF
Sbjct: 129 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID--FGNEFKNIFGTPEF 182
Query: 542 LQLGRITK-----KTDVWSLGVLILEIMTGKFP 569
+ + + D+WS+GV+ +++G P
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRR---LGRLRHPNLLPL 430
+ILG G F + A L+T +K ++ + + + R + RL HP + L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVN---LHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ ++ +EKL S A N L + +G S D + L+YL+
Sbjct: 98 Y-FTFQDDEKLYF-----GLSYAKNGCLLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL------MIAYKSPEF 541
+ +I H +K N+LLNE + + D+G V++ ES Q Y SPE
Sbjct: 150 GK--GII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 205
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
L +K +D+W+LG +I +++ G P
Sbjct: 206 LTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 16/214 (7%)
Query: 370 LRASAEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEF--QEHMRRLGRLRHPNL 427
L E +G G FG +K + +V + + E Q+ + L + P +
Sbjct: 28 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 87
Query: 428 LPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
Y + + ++ E++ S A++L L LD I++ + KGL YL+
Sbjct: 88 TKYYGSYLKDTKLWIIMEYLGGGS-ALDL-----LEPGPLDETQIATILREILKGLDYLH 141
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQ 543
E H IK++NVLL+E E LAD+G+ + + + +PE ++
Sbjct: 142 SEKKI----HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIK 197
Query: 544 LGRITKKTDVWSLGVLILEIMTGKFPANFLQQGK 577
K D+WSLG+ +E+ G+ P + L K
Sbjct: 198 QSAYDSKADIWSLGITAIELARGEPPHSELHPMK 231
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 29/232 (12%)
Query: 373 SAEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN------VGREEFQEHMRRLGRLRHP 425
+ E LGSG F K STG K K+ V RE+ + + L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 426 NLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQY 485
N++ L Y K + +L+ E V L L ++L + + +K + G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-----EFLKQILNGVYY 129
Query: 486 LYRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGLIPVMNQESAQELMIAYKSPEF 541
L+ SL H +K N++L + P + D+GL ++ E + +PEF
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID--FGNEFKNIFGTPEF 183
Query: 542 LQLGRITK-----KTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVN 588
+ + + D+WS+GV+ +++G P FL K+ S VN
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQETLANVSAVN 233
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 29/232 (12%)
Query: 373 SAEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN------VGREEFQEHMRRLGRLRHP 425
+ E LGSG F K STG K K+ V RE+ + + L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 426 NLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQY 485
N++ L Y K + +L+ E V L L ++L + + +K + G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-----EEATEFLKQILNGVYY 129
Query: 486 LYRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGLIPVMNQESAQELMIAYKSPEF 541
L+ SL H +K N++L + P + D+GL ++ E + +PEF
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID--FGNEFKNIFGTPEF 183
Query: 542 LQLGRITK-----KTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVN 588
+ + + D+WS+GV+ +++G P FL K+ S VN
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQETLANVSAVN 233
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 98/231 (42%), Gaps = 29/231 (12%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMN------NVGREEFQEHMRRLGRLRHPN 426
E LGSG F K TG K K+ V REE + + L +RHPN
Sbjct: 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPN 69
Query: 427 LLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
++ L + K + +L+ E V L L ++L + + +K + G+ YL
Sbjct: 70 IITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT-----QFLKQILDGVHYL 124
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGLIPVMNQESAQELMIAYKSPEFL 542
+ S H +K N++L + P L D+G+ + E+ E + +PEF+
Sbjct: 125 H----SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTPEFV 178
Query: 543 QLGRITK-----KTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVN 588
+ + D+WS+GV+ +++G P FL + K+ S VN
Sbjct: 179 APEIVNYEPLGLEADMWSIGVITYILLSGASP--FLGETKQETLTNISAVN 227
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 29/232 (12%)
Query: 373 SAEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN------VGREEFQEHMRRLGRLRHP 425
+ E LGSG F K STG K K+ V RE+ + + L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 426 NLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQY 485
N++ L Y K + +L+ E V L L ++L + + +K + G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-----EFLKQILNGVYY 129
Query: 486 LYRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGLIPVMNQESAQELMIAYKSPEF 541
L+ SL H +K N++L + P + D+GL ++ E + +PEF
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID--FGNEFKNIFGTPEF 183
Query: 542 LQLGRITK-----KTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVN 588
+ + + D+WS+GV+ +++G P FL K+ S VN
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQETLANVSAVN 233
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 29/232 (12%)
Query: 373 SAEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN------VGREEFQEHMRRLGRLRHP 425
+ E LGSG F K STG K K+ V RE+ + + L ++HP
Sbjct: 15 TGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 426 NLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQY 485
N++ L Y K + +L+ E V L L ++L + + +K + G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-----EEATEFLKQILNGVYY 129
Query: 486 LYRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGLIPVMNQESAQELMIAYKSPEF 541
L+ SL H +K N++L + P + D+GL ++ E + +PEF
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID--FGNEFKNIFGTPEF 183
Query: 542 LQLGRITK-----KTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVN 588
+ + + D+WS+GV+ +++G P FL K+ S VN
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQETLANVSAVN 233
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 102/215 (47%), Gaps = 23/215 (10%)
Query: 368 DLLRASAEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNL 427
++ + +++G+G FG ++A L + +K+ Q E Q + R+ ++HPN+
Sbjct: 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQ--IMRI--VKHPNV 94
Query: 428 LPLVAYYY----RKEEKL--LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAK 481
+ L A++Y +K+E LV E+VP+ + H + L Q +L + + + +
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRH-YAKLKQTMPMLLIKLYMYQ-LLR 152
Query: 482 GLQYLYRELPSLIAPHGHIKSSNVLLNESLEPV-LADYGLIPVMNQESAQELMIA---YK 537
L Y++ S+ H IK N+LL+ + L D+G ++ I Y+
Sbjct: 153 SLAYIH----SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYR 208
Query: 538 SPEFL-QLGRITKKTDVWSLGVLILEIMTGK--FP 569
+PE + T D+WS G ++ E+M G+ FP
Sbjct: 209 APELIFGATNYTTNIDIWSTGCVMAELMQGQPLFP 243
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG+G FG + +K K+ ++ +EF E + + L H L+ L +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+ ++ E++ L L + Q L++ K V + ++YL S
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKDVCEAMEYL----ESKQFL 126
Query: 497 HGHIKSSNVLLNESLEPVLADYGLI-PVMNQESAQ----ELMIAYKSPEFLQLGRITKKT 551
H + + N L+N+ ++D+GL V++ E + + + PE L + + K+
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 186
Query: 552 DVWSLGVLILEIMT-GKFPANFLQQGKKAD 580
D+W+ GVL+ EI + GK P + A+
Sbjct: 187 DIWAFGVLMWEIYSLGKMPYERFTNSETAE 216
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 375 EILGSGCFGSSYKASLSTGAMMV-VKRFK-QMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
E++GSG A + V +KR + +E + ++ + + HPN++
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 80
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPS---LDWPSRLKIVKGVAKGLQYLYRE 489
+ K+E LV + + S+ + A G+ LD + I++ V +GL+YL++
Sbjct: 81 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN 140
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM------NQESAQELMI---AYKSPE 540
H +K+ N+LL E +AD+G+ + + ++ + + +PE
Sbjct: 141 GQI----HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 196
Query: 541 FLQLGR-ITKKTDVWSLGVLILEIMTGKFP 569
++ R K D+WS G+ +E+ TG P
Sbjct: 197 VMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 23/209 (11%)
Query: 374 AEILGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLP 429
+++G G FG +KAS AM ++ +F+ + F E + P ++
Sbjct: 80 VKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ 139
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L + + +V E++P L VNL + D P K K +
Sbjct: 140 LFCAFQDDKYLYMVMEYMPGGDL-VNL-------MSNYDVPE--KWAKFYTAEVVLALDA 189
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-----YKSPEFLQL 544
+ S+ H +K N+LL++ LAD+G M++ A Y SPE L+
Sbjct: 190 IHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKS 249
Query: 545 ----GRITKKTDVWSLGVLILEIMTGKFP 569
G ++ D WS+GV + E++ G P
Sbjct: 250 QGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG+G FG + +K K+ ++ +EF E + + L H L+ L +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+ ++ E++ L L + Q L++ K V + ++YL S
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKDVCEAMEYL----ESKQFL 127
Query: 497 HGHIKSSNVLLNESLEPVLADYGLI-PVMNQESAQ----ELMIAYKSPEFLQLGRITKKT 551
H + + N L+N+ ++D+GL V++ E + + + PE L + + K+
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 552 DVWSLGVLILEIMT-GKFPANFLQQGKKAD 580
D+W+ GVL+ EI + GK P + A+
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYERFTNSETAE 217
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG+G FG + +K K+ ++ +EF E + + L H L+ L +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+ ++ E++ L L + Q L++ K V + ++YL S
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKDVCEAMEYL----ESKQFL 142
Query: 497 HGHIKSSNVLLNESLEPVLADYGLI-PVMNQESAQ----ELMIAYKSPEFLQLGRITKKT 551
H + + N L+N+ ++D+GL V++ E + + + PE L + + K+
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 552 DVWSLGVLILEIMT-GKFPANFLQQGKKAD 580
D+W+ GVL+ EI + GK P + A+
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYERFTNSETAE 232
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 33/231 (14%)
Query: 355 SFVRDDVERFDLHDLLRASAEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN------V 407
+F + VE D +D+ E LGSG F K STG K K+ + V
Sbjct: 4 TFKQQKVE--DFYDI----GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGV 57
Query: 408 GREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSL 467
REE + + L ++ HPN++ L Y + + +L+ E V L L ++L +
Sbjct: 58 CREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEA 117
Query: 468 DWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPV----LADYGLIPV 523
+K + G+ YL+ + + H +K N++L + P+ L D+GL
Sbjct: 118 T-----SFIKQILDGVNYLHTKKIA----HFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 524 MNQESAQELMIAYKSPEFLQLGRITK-----KTDVWSLGVLILEIMTGKFP 569
+ E E + +PEF+ + + D+WS+GV+ +++G P
Sbjct: 169 I--EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 29/232 (12%)
Query: 373 SAEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN------VGREEFQEHMRRLGRLRHP 425
+ E LGSG F K STG K K+ V RE+ + + L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 426 NLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQY 485
N++ L Y K + +L+ E V L L ++L + + +K + G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-----EEATEFLKQILNGVYY 129
Query: 486 LYRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGLIPVMNQESAQELMIAYKSPEF 541
L+ SL H +K N++L + P + D+GL ++ E + +PEF
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID--FGNEFKNIFGTPEF 183
Query: 542 LQLGRITK-----KTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVN 588
+ + + D+WS+GV+ +++G P FL K+ S VN
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQETLANVSAVN 233
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 29/232 (12%)
Query: 373 SAEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN------VGREEFQEHMRRLGRLRHP 425
+ E LGSG F K STG K K+ V RE+ + + L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 426 NLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQY 485
N++ L Y K + +L+ E V L L ++L + + +K + G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-----EEATEFLKQILNGVYY 129
Query: 486 LYRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGLIPVMNQESAQELMIAYKSPEF 541
L+ SL H +K N++L + P + D+GL ++ E + +PEF
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID--FGNEFKNIFGTPEF 183
Query: 542 LQLGRITK-----KTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVN 588
+ + + D+WS+GV+ +++G P FL K+ S VN
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQETLANVSAVN 233
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 16/214 (7%)
Query: 370 LRASAEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEF--QEHMRRLGRLRHPNL 427
L E +G G FG +K + +V + + E Q+ + L + P +
Sbjct: 8 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 428 LPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
Y + + ++ E++ S A++L L LD I++ + KGL YL+
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGS-ALDL-----LEPGPLDETQIATILREILKGLDYLH 121
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQ 543
E H IK++NVLL+E E LAD+G+ + + + +PE ++
Sbjct: 122 SEKKI----HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIK 177
Query: 544 LGRITKKTDVWSLGVLILEIMTGKFPANFLQQGK 577
K D+WSLG+ +E+ G+ P + L K
Sbjct: 178 QSAYDSKADIWSLGITAIELARGEPPHSELHPMK 211
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 98/231 (42%), Gaps = 29/231 (12%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMN------NVGREEFQEHMRRLGRLRHPN 426
E LGSG F K TG K K+ V REE + + L +RHPN
Sbjct: 31 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPN 90
Query: 427 LLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
++ L + K + +L+ E V L L ++L + + +K + G+ YL
Sbjct: 91 IITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT-----QFLKQILDGVHYL 145
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGLIPVMNQESAQELMIAYKSPEFL 542
+ S H +K N++L + P L D+G+ + E+ E + +PEF+
Sbjct: 146 H----SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTPEFV 199
Query: 543 QLGRITK-----KTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVN 588
+ + D+WS+GV+ +++G P FL + K+ S VN
Sbjct: 200 APEIVNYEPLGLEADMWSIGVITYILLSGASP--FLGETKQETLTNISAVN 248
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG+G FG + +K K+ ++ +EF E + + L H L+ L +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+ ++ E++ L L + Q L++ K V + ++YL S
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKDVCEAMEYL----ESKQFL 133
Query: 497 HGHIKSSNVLLNESLEPVLADYGLI-PVMNQESAQ----ELMIAYKSPEFLQLGRITKKT 551
H + + N L+N+ ++D+GL V++ E + + + PE L + + K+
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 193
Query: 552 DVWSLGVLILEIMT-GKFPANFLQQGKKAD 580
D+W+ GVL+ EI + GK P + A+
Sbjct: 194 DIWAFGVLMWEIYSLGKMPYERFTNSETAE 223
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 93/203 (45%), Gaps = 21/203 (10%)
Query: 377 LGSGCFGSSY----KASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LGSG +G K + A+ ++++ ++ + E + L L HPN++ L
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRK-TSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
++ K LV E L + + + + I+K V G+ YL++ +
Sbjct: 104 FFEDKRNYYLVMECYKGGELF-----DEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH--N 156
Query: 493 LIAPHGHIKSSNVLLNESLEPVL---ADYGLIPVM-NQESAQELM--IAYKSPEFLQLGR 546
++ H +K N+LL + L D+GL V NQ+ +E + Y +PE L+ +
Sbjct: 157 IV--HRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR-KK 213
Query: 547 ITKKTDVWSLGVLILEIMTGKFP 569
+K DVWS+GV++ ++ G P
Sbjct: 214 YDEKCDVWSIGVILFILLAGYPP 236
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG+G FG + +K K+ ++ +EF E + + L H L+ L +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+ ++ E++ L L + Q L++ K V + ++YL S
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKDVCEAMEYL----ESKQFL 122
Query: 497 HGHIKSSNVLLNESLEPVLADYGLI-PVMNQESAQ----ELMIAYKSPEFLQLGRITKKT 551
H + + N L+N+ ++D+GL V++ E + + + PE L + + K+
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 552 DVWSLGVLILEIMT-GKFPANFLQQGKKAD 580
D+W+ GVL+ EI + GK P + A+
Sbjct: 183 DIWAFGVLMWEIYSLGKMPYERFTNSETAE 212
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 16/214 (7%)
Query: 370 LRASAEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEF--QEHMRRLGRLRHPNL 427
L E +G G FG +K + +V + + E Q+ + L + P +
Sbjct: 8 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 428 LPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
Y + + ++ E++ S A++L L LD I++ + KGL YL+
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGS-ALDL-----LEPGPLDETQIATILREILKGLDYLH 121
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQ 543
E H IK++NVLL+E E LAD+G+ + + + +PE ++
Sbjct: 122 SEKKI----HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIK 177
Query: 544 LGRITKKTDVWSLGVLILEIMTGKFPANFLQQGK 577
K D+WSLG+ +E+ G+ P + L K
Sbjct: 178 QSAYDSKADIWSLGITAIELARGEPPHSELHPMK 211
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 98/212 (46%), Gaps = 18/212 (8%)
Query: 364 FDLHDLLRASAEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRL 422
+D +D+L E LGSG FG ++ +TG + V K + + + + + +L
Sbjct: 50 YDYYDIL----EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL 105
Query: 423 RHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKG 482
HP L+ L + K E +L+ EF+ L + A + + ++ +G
Sbjct: 106 HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRI----AAEDYKMSEAEVINYMRQACEG 161
Query: 483 LQYLYRELPSLIAPHGHIKSSNVLL--NESLEPVLADYGLIPVMNQESAQELMIA---YK 537
L++++ S++ H IK N++ ++ + D+GL +N + ++ A +
Sbjct: 162 LKHMHEH--SIV--HLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFA 217
Query: 538 SPEFLQLGRITKKTDVWSLGVLILEIMTGKFP 569
+PE + + TD+W++GVL +++G P
Sbjct: 218 APEIVDREPVGFYTDMWAIGVLGYVLLSGLSP 249
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 22/202 (10%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFK------QMNNVGREEFQEHMRRLGRLRHPNL 427
+ LG G F + YKA +T ++ +K+ K + + R +E ++ L L HPN+
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALRE-IKLLQELSHPNI 74
Query: 428 LPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ L+ + K LV +F+ + L V + + + PS L ++G L+YL+
Sbjct: 75 IGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTLQG----LEYLH 129
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM---NQESAQELMIA-YKSPEFLQ 543
+ H +K +N+LL+E+ LAD+GL N+ +++ Y++PE L
Sbjct: 130 QHW----ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLF 185
Query: 544 LGRITK-KTDVWSLGVLILEIM 564
R+ D+W++G ++ E++
Sbjct: 186 GARMYGVGVDMWAVGCILAELL 207
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 25/208 (12%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRR---LGRLRHPNLLPL 430
+ILG G F + A L+T +K ++ + + + R + RL HP + L
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVN---LHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ ++ +EKL S A N L + +G S D + L+YL+
Sbjct: 99 Y-FTFQDDEKLYF-----GLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 150
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL------MIAYKSPEF 541
+ +I H +K N+LLNE + + D+G V++ ES Q Y SPE
Sbjct: 151 GK--GII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 206
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
L K +D+W+LG +I +++ G P
Sbjct: 207 LTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 375 EILGSGCFGSSYKASLST----GAMMVVKRFKQMNNVGREEFQEHMRR--LGRLRHPNLL 428
++LG G FG + T G + +K K+ R+ + M R L + HP ++
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 429 PLVAYYYRKEEKL-LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
L Y ++ E KL L+ +F+ L L + + + + +A GL +L+
Sbjct: 94 KL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAELALGLDHLH 147
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI--PVMNQESAQEL--MIAYKSPEFLQ 543
SL + +K N+LL+E L D+GL + +++ A + Y +PE +
Sbjct: 148 ----SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVN 203
Query: 544 LGRITKKTDVWSLGVLILEIMTGKFP 569
+ D WS GVL+ E++TG P
Sbjct: 204 RQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436
LG+G FG + +K K+ ++ +EF E + + L H L+ L +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAP 496
+ ++ E++ L L + Q L++ K V + ++YL S
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKDVCEAMEYL----ESKQFL 127
Query: 497 HGHIKSSNVLLNESLEPVLADYGLI-PVMNQESAQ----ELMIAYKSPEFLQLGRITKKT 551
H + + N L+N+ ++D+GL V++ E + + + PE L + + K+
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 552 DVWSLGVLILEIMT-GKFPANFLQQGKKAD 580
D+W+ GVL+ EI + GK P + A+
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYERFTNSETAE 217
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 474 KIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM 533
K+ V +GL YL RE ++ H +K SN+L+N E L D+G+ + A +
Sbjct: 118 KVSIAVLRGLAYL-REKHQIM--HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 174
Query: 534 --IAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFP 569
+Y +PE LQ + ++D+WS+G+ ++E+ G++P
Sbjct: 175 GTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 97/210 (46%), Gaps = 31/210 (14%)
Query: 375 EILGSGCFGSSYKASLST-GAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
E++GSG FG +KA G V+KR K N E+ + ++ L +L H N++
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGC 72
Query: 434 Y--------------YRKEEKLLV--HEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVK 477
+ R + K L EF K +L + + LD L++ +
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG---EKLDKVLALELFE 129
Query: 478 GVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL---MI 534
+ KG+ Y++ + LI + +K SN+ L ++ + + D+GL+ + + + +
Sbjct: 130 QITKGVDYIHSK--KLI--NRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTL 185
Query: 535 AYKSPEFLQLGRITKKTDVWSLGVLILEIM 564
Y SPE + K+ D+++LG+++ E++
Sbjct: 186 RYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 25/208 (12%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRR---LGRLRHPNLLPL 430
+ILG G F + A L+T +K ++ + + + R + RL HP + L
Sbjct: 43 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 102
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVN---LHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ ++ +EKL S A N L + +G S D + L+YL+
Sbjct: 103 Y-FCFQDDEKLYF-----GLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 154
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL------MIAYKSPEF 541
+ +I H +K N+LLNE + + D+G V++ ES Q Y SPE
Sbjct: 155 GK--GII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 210
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
L K +D+W+LG +I +++ G P
Sbjct: 211 LTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 25/208 (12%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRR---LGRLRHPNLLPL 430
+ILG G F + A L+T +K ++ + + + R + RL HP + L
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVN---LHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ ++ +EKL S A N L + +G S D + L+YL+
Sbjct: 99 Y-FTFQDDEKLYF-----GLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 150
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL------MIAYKSPEF 541
+ +I H +K N+LLNE + + D+G V++ ES Q Y SPE
Sbjct: 151 GK--GII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 206
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
L K +D+W+LG +I +++ G P
Sbjct: 207 LTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 375 EILGSGCFGSSYKASLSTGAMMV-VKRFK-QMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
E++GSG A + V +KR + +E + ++ + + HPN++
Sbjct: 16 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 75
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPS---LDWPSRLKIVKGVAKGLQYLYRE 489
+ K+E LV + + S+ + A G+ LD + I++ V +GL+YL++
Sbjct: 76 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN 135
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM------NQESAQELMI---AYKSPE 540
H +K+ N+LL E +AD+G+ + + ++ + + +PE
Sbjct: 136 GQI----HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 191
Query: 541 FLQLGR-ITKKTDVWSLGVLILEIMTGKFP 569
++ R K D+WS G+ +E+ TG P
Sbjct: 192 VMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 25/208 (12%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRR---LGRLRHPNLLPL 430
+ILG G F + A L+T +K ++ + + + R + RL HP + L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVN---LHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ ++ +EKL S A N L + +G S D + L+YL+
Sbjct: 98 Y-FTFQDDEKLYF-----GLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL------MIAYKSPEF 541
+ +I H +K N+LLNE + + D+G V++ ES Q Y SPE
Sbjct: 150 GK--GII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
L K +D+W+LG +I +++ G P
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 25/208 (12%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRR---LGRLRHPNLLPL 430
+ILG G F + A L+T +K ++ + + + R + RL HP + L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVN---LHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ ++ +EKL S A N L + +G S D + L+YL+
Sbjct: 96 Y-FTFQDDEKLYF-----GLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 147
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL------MIAYKSPEF 541
+ +I H +K N+LLNE + + D+G V++ ES Q Y SPE
Sbjct: 148 GK--GII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
L K +D+W+LG +I +++ G P
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 475 IVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMI 534
++K + KGL YL+ E H IK++NVLL+E + LAD+G+ + +
Sbjct: 125 MLKEILKGLDYLHSEKKI----HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF 180
Query: 535 A----YKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFP 569
+ +PE +Q K D+WSLG+ +E+ G+ P
Sbjct: 181 VGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 25/208 (12%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRR---LGRLRHPNLLPL 430
+ILG G F + A L+T +K ++ + + + R + RL HP + L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVN---LHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ ++ +EKL S A N L + +G S D + L+YL+
Sbjct: 98 Y-FTFQDDEKLYF-----GLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL------MIAYKSPEF 541
+ +I H +K N+LLNE + + D+G V++ ES Q Y SPE
Sbjct: 150 GK--GII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
L K +D+W+LG +I +++ G P
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 25/208 (12%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRR---LGRLRHPNLLPL 430
+ILG G F + A L+T +K ++ + + + R + RL HP + L
Sbjct: 41 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 100
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVN---LHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ ++ +EKL S A N L + +G S D + L+YL+
Sbjct: 101 Y-FTFQDDEKLYF-----GLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 152
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL------MIAYKSPEF 541
+ +I H +K N+LLNE + + D+G V++ ES Q Y SPE
Sbjct: 153 GK--GII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 208
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
L K +D+W+LG +I +++ G P
Sbjct: 209 LTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRR---LGRLRHPNLLPL 430
+ILG G F + A L+T +K ++ + + + R + RL HP + L
Sbjct: 15 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 74
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVN---LHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ ++ +EKL S A N L + +G S D + L+YL+
Sbjct: 75 Y-FTFQDDEKLYF-----GLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 126
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL------MIAYKSPEF 541
+ +I H +K N+LLNE + + D+G V++ ES Q Y SPE
Sbjct: 127 GK--GII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 182
Query: 542 LQLGRITKKTDVWSLGVLILEIMTG 566
L K +D+W+LG +I +++ G
Sbjct: 183 LTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 25/208 (12%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRR---LGRLRHPNLLPL 430
+ILG G F + A L+T +K ++ + + + R + RL HP + L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVN---LHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ ++ +EKL S A N L + +G S D + L+YL+
Sbjct: 98 Y-FTFQDDEKLYF-----GLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL------MIAYKSPEF 541
+ +I H +K N+LLNE + + D+G V++ ES Q Y SPE
Sbjct: 150 GK--GII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
L K +D+W+LG +I +++ G P
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKRF--KQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
+G G FG + S G V+K +M++ REE + + L ++HPN++
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQAL---GQPSLDWPSRLKIVKGVAKGLQYLYREL 490
+ +V ++ L ++ + + LDW ++ + + L+R+
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRD- 150
Query: 491 PSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA------YKSPEFLQL 544
IKS N+ L + L D+G+ V+N S EL A Y SPE +
Sbjct: 151 ---------IKSQNIFLTKDGTVQLGDFGIARVLN--STVELARACIGTPYYLSPEICEN 199
Query: 545 GRITKKTDVWSLGVLILEIMTGK 567
K+D+W+LG ++ E+ T K
Sbjct: 200 KPYNNKSDIWALGCVLYELCTLK 222
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 25/208 (12%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRR---LGRLRHPNLLPL 430
+ILG G F + A L+T +K ++ + + + R + RL HP + L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVN---LHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ ++ +EKL S A N L + +G S D + L+YL+
Sbjct: 98 Y-FTFQDDEKLYF-----GLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL------MIAYKSPEF 541
+ +I H +K N+LLNE + + D+G V++ ES Q Y SPE
Sbjct: 150 GK--GII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
L K +D+W+LG +I +++ G P
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 25/208 (12%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRR---LGRLRHPNLLPL 430
+ILG G F + A L+T +K ++ + + + R + RL HP + L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVN---LHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ ++ +EKL S A N L + +G S D + L+YL+
Sbjct: 96 Y-FTFQDDEKLYF-----GLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 147
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL------MIAYKSPEF 541
+ +I H +K N+LLNE + + D+G V++ ES Q Y SPE
Sbjct: 148 GK--GII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
L K +D+W+LG +I +++ G P
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 23/207 (11%)
Query: 375 EILGSGCFGSSYKASLSTGA----MMVVKRFKQMNNVGREEFQEHMRR--LGRLRHPNLL 428
++LG G FG + +G+ + +K K+ R+ + M R L + HP ++
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 429 PLVAYYYRKEEKL-LVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYL 486
L Y ++ E KL L+ +F+ L L + + + + L + L +
Sbjct: 90 KL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGII 148
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI--PVMNQESAQEL--MIAYKSPEFL 542
YR+L K N+LL+E L D+GL + +++ A + Y +PE +
Sbjct: 149 YRDL----------KPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV 198
Query: 543 QLGRITKKTDVWSLGVLILEIMTGKFP 569
T+ D WS GVL+ E++TG P
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRR---LGRLRHPNLLPL 430
+ILG G F + A L+T +K ++ + + + R + RL HP + L
Sbjct: 16 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 75
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVN---LHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ ++ +EKL S A N L + +G S D + L+YL+
Sbjct: 76 Y-FTFQDDEKLYF-----GLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 127
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL------MIAYKSPEF 541
+ +I H +K N+LLNE + + D+G V++ ES Q Y SPE
Sbjct: 128 GK--GII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 183
Query: 542 LQLGRITKKTDVWSLGVLILEIMTG 566
L K +D+W+LG +I +++ G
Sbjct: 184 LTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRR---LGRLRHPNLLPL 430
+ILG G F + A L+T +K ++ + + + R + RL HP + L
Sbjct: 13 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 72
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVN---LHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ ++ +EKL S A N L + +G S D + L+YL+
Sbjct: 73 Y-FTFQDDEKLYF-----GLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 124
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL------MIAYKSPEF 541
+ +I H +K N+LLNE + + D+G V++ ES Q Y SPE
Sbjct: 125 GK--GII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 180
Query: 542 LQLGRITKKTDVWSLGVLILEIMTG 566
L K +D+W+LG +I +++ G
Sbjct: 181 LTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRR---LGRLRHPNLLPL 430
+ILG G F + A L+T +K ++ + + + R + RL HP + L
Sbjct: 14 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 73
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVN---LHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ ++ +EKL S A N L + +G S D + L+YL+
Sbjct: 74 Y-FTFQDDEKLYF-----GLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 125
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL------MIAYKSPEF 541
+ +I H +K N+LLNE + + D+G V++ ES Q Y SPE
Sbjct: 126 GK--GII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 181
Query: 542 LQLGRITKKTDVWSLGVLILEIMTG 566
L K +D+W+LG +I +++ G
Sbjct: 182 LTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 25/208 (12%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRR---LGRLRHPNLLPL 430
+ILG G F + A L+T +K ++ + + + R + RL HP + L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVN---LHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ ++ +EKL S A N L + +G S D + L+YL+
Sbjct: 98 Y-FTFQDDEKLYF-----GLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL------MIAYKSPEF 541
+ +I H +K N+LLNE + + D+G V++ ES Q Y SPE
Sbjct: 150 GK--GII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
L K +D+W+LG +I +++ G P
Sbjct: 206 LTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 23/207 (11%)
Query: 375 EILGSGCFGSSYKASLSTGA----MMVVKRFKQMNNVGREEFQEHMRR--LGRLRHPNLL 428
++LG G FG + +G+ + +K K+ R+ + M R L + HP ++
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 429 PLVAYYYRKEEKL-LVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYL 486
L Y ++ E KL L+ +F+ L L + + + + L + L +
Sbjct: 90 KL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGII 148
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI--PVMNQESAQEL--MIAYKSPEFL 542
YR+L K N+LL+E L D+GL + +++ A + Y +PE +
Sbjct: 149 YRDL----------KPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV 198
Query: 543 QLGRITKKTDVWSLGVLILEIMTGKFP 569
T+ D WS GVL+ E++TG P
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 23/207 (11%)
Query: 375 EILGSGCFGSSYKASLSTGA----MMVVKRFKQMNNVGREEFQEHMRR--LGRLRHPNLL 428
++LG G FG + +G+ + +K K+ R+ + M R L + HP ++
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 429 PLVAYYYRKEEKL-LVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYL 486
L Y ++ E KL L+ +F+ L L + + + + L + L +
Sbjct: 91 KL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGII 149
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI--PVMNQESAQEL--MIAYKSPEFL 542
YR+L K N+LL+E L D+GL + +++ A + Y +PE +
Sbjct: 150 YRDL----------KPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV 199
Query: 543 QLGRITKKTDVWSLGVLILEIMTGKFP 569
T+ D WS GVL+ E++TG P
Sbjct: 200 NRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 87
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 130
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + DYGL + E +
Sbjct: 131 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR 186
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 14/201 (6%)
Query: 377 LGSGCFGSSYKAS-LSTGAMMVVKRF-KQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYY 434
LGSG FG + S+G V+K K + V E+ + + L L HPN++ + +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 435 YRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLI 494
+V E L + QA G+ +L +++K + L Y + S
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGK-ALSEGYVAELMKQMMNALAYFH----SQH 144
Query: 495 APHGHIKSSNVLLNES--LEPV-LADYGLIPVM--NQESAQELMIA-YKSPEFLQLGRIT 548
H +K N+L ++ P+ + D+GL + ++ S A Y +PE + +T
Sbjct: 145 VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRD-VT 203
Query: 549 KKTDVWSLGVLILEIMTGKFP 569
K D+WS GV++ ++TG P
Sbjct: 204 FKCDIWSAGVVMYFLLTGCLP 224
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
+++G+G FG Y+A L +G ++ +K+ Q E Q MR+L H N++ L
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-IMRKLD---HCNIVRLRY 114
Query: 433 YYYRKEEKL------LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
++Y EK LV ++VP+ V H SR K V Y+
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY------------SRAKQTLPVIYVKLYM 162
Query: 487 YRELPSLIAPHGH------IKSSNVLLNESLEPV-LADYGLIPVMNQESAQELMIA---Y 536
Y+ SL H IK N+LL+ + L D+G + + I Y
Sbjct: 163 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 222
Query: 537 KSPEFL-QLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
++PE + T DVWS G ++ E++ G+ FP +
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 260
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 93/215 (43%), Gaps = 34/215 (15%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYY 434
EI G FG +KA L + VK F + + +E G ++H NLL +A
Sbjct: 21 EIKARGRFGCVWKAQLMND-FVAVKIFPLQDKQSWQSEREIFSTPG-MKHENLLQFIAAE 78
Query: 435 YR----KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYREL 490
R + E L+ F K SL L G+ + W + + +++GL YL+ ++
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTDYLKGN------IITWNELCHVAETMSRGLSYLHEDV 132
Query: 491 PSL--------IAPHGHIKSSNVLLNESLEPVLADYGLIPVM------NQESAQELMIAY 536
P IA H KS NVLL L VLAD+GL Q Y
Sbjct: 133 PWCRGEGHKPSIA-HRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRY 191
Query: 537 KSPEFLQLGRIT------KKTDVWSLGVLILEIMT 565
+PE L+ G I + D++++G+++ E+++
Sbjct: 192 MAPEVLE-GAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
+++G+G FG Y+A L +G ++ +K+ Q E Q MR+L H N++ L
Sbjct: 53 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-IMRKLD---HCNIVRLRY 108
Query: 433 YYYRKEEKL------LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
++Y EK LV ++VP+ V H SR K V Y+
Sbjct: 109 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY------------SRAKQTLPVIYVKLYM 156
Query: 487 YRELPSLIAPHGH------IKSSNVLLNESLEPV-LADYGLIPVMNQESAQELMIA---Y 536
Y+ SL H IK N+LL+ + L D+G + + I Y
Sbjct: 157 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 216
Query: 537 KSPEFL-QLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
++PE + T DVWS G ++ E++ G+ FP +
Sbjct: 217 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 254
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 32/212 (15%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRF---KQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
E +G G +G YKA + G +K+ K+ + +E + L L+H N++ L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIRE-ISILKELKHSNIVKLY 66
Query: 432 AYYYRKEEKLLVHEFVP---KRSLAVNLHGHQALGQPSLDWPSRLKIVKGVA--KGLQYL 486
+ K+ +LV E + K+ L V G +++ S L+++ G+A + L
Sbjct: 67 DVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSF----LLQLLNGIAYCHDRRVL 122
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKSPEF 541
+R+L K N+L+N E +AD+GL IPV + + + + + Y++P+
Sbjct: 123 HRDL----------KPQNLLINREGELKIADFGLARAFGIPV-RKYTHEVVTLWYRAPDV 171
Query: 542 LQLGRITKKT-DVWSLGVLILEIMTGK--FPA 570
L + T D+WS+G + E++ G FP
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPG 203
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
+++G+G FG Y+A L +G ++ +K+ Q E Q MR+L H N++ L
Sbjct: 63 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-IMRKLD---HCNIVRLRY 118
Query: 433 YYYRKEEKL------LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
++Y EK LV ++VP+ V H SR K V Y+
Sbjct: 119 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY------------SRAKQTLPVIYVKLYM 166
Query: 487 YRELPSLIAPHGH------IKSSNVLLNESLEPV-LADYGLIPVMNQESAQELMIA---Y 536
Y+ SL H IK N+LL+ + L D+G + + I Y
Sbjct: 167 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 226
Query: 537 KSPEFL-QLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
++PE + T DVWS G ++ E++ G+ FP +
Sbjct: 227 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 264
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRR---LGRLRHPNLLPL 430
+ILG G F + A L+T +K ++ + + + R + RL HP + L
Sbjct: 20 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 79
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVN---LHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ ++ +EKL S A N L + +G S D + L+YL+
Sbjct: 80 Y-FTFQDDEKLYF-----GLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 131
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL------MIAYKSPEF 541
+ +I H +K N+LLNE + + D+G V++ ES Q Y SPE
Sbjct: 132 GK--GII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 187
Query: 542 LQLGRITKKTDVWSLGVLILEIMTG 566
L K +D+W+LG +I +++ G
Sbjct: 188 LTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 23/206 (11%)
Query: 375 EILGSGCFGSSYKASLS-TGAMMVVK-----RFKQMNNVGREEFQEHMRRLGRLRHPNLL 428
+ LG G FG TG + VK + + ++ VG+ + ++ L RHP+++
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGK--IRREIQNLKLFRHPHII 79
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYR 488
L + +V E+V L + LD ++ + + G+ Y +R
Sbjct: 80 KLYQVISTPSDIFMVMEYVSGGELFDYI-----CKNGRLDEKESRRLFQQILSGVDYCHR 134
Query: 489 ELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA---YKSPEFLQLG 545
+ H +K NVLL+ + +AD+GL +M+ Y +PE + G
Sbjct: 135 HM----VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVIS-G 189
Query: 546 RITK--KTDVWSLGVLILEIMTGKFP 569
R+ + D+WS GV++ ++ G P
Sbjct: 190 RLYAGPEVDIWSSGVILYALLCGTLP 215
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 32/212 (15%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRF---KQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
E +G G +G YKA + G +K+ K+ + +E + L L+H N++ L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIRE-ISILKELKHSNIVKLY 66
Query: 432 AYYYRKEEKLLVHEFVP---KRSLAVNLHGHQALGQPSLDWPSRLKIVKGVA--KGLQYL 486
+ K+ +LV E + K+ L V G +++ S L+++ G+A + L
Sbjct: 67 DVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSF----LLQLLNGIAYCHDRRVL 122
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKSPEF 541
+R+L K N+L+N E +AD+GL IPV + + + + + Y++P+
Sbjct: 123 HRDL----------KPQNLLINREGELKIADFGLARAFGIPV-RKYTHEVVTLWYRAPDV 171
Query: 542 LQLGRITKKT-DVWSLGVLILEIMTGK--FPA 570
L + T D+WS+G + E++ G FP
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPG 203
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
+++G+G FG Y+A L +G ++ +K+ Q E Q MR+L H N++ L
Sbjct: 61 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-IMRKLD---HCNIVRLRY 116
Query: 433 YYYRKEEKL------LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
++Y EK LV ++VP+ V H SR K V Y+
Sbjct: 117 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY------------SRAKQTLPVIYVKLYM 164
Query: 487 YRELPSLIAPHGH------IKSSNVLLNESLEPV-LADYGLIPVMNQESAQELMIA---Y 536
Y+ SL H IK N+LL+ + L D+G + + I Y
Sbjct: 165 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 224
Query: 537 KSPEFL-QLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
++PE + T DVWS G ++ E++ G+ FP +
Sbjct: 225 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 262
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
+++G+G FG Y+A L +G ++ +K+ Q E Q MR+L H N++ L
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-IMRKLD---HCNIVRLRY 114
Query: 433 YYYRKEEKL------LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
++Y EK LV ++VP+ V H SR K V Y+
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY------------SRAKQTLPVIYVKLYM 162
Query: 487 YRELPSLIAPHGH------IKSSNVLLNESLEPV-LADYGLIPVMNQESAQELMIA---Y 536
Y+ SL H IK N+LL+ + L D+G + + I Y
Sbjct: 163 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 222
Query: 537 KSPEFL-QLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
++PE + T DVWS G ++ E++ G+ FP +
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 260
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 85/206 (41%), Gaps = 20/206 (9%)
Query: 376 ILGSGCFGSSY----KASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+LG G FG K + A+ V+ + + +E ++ L +L HPN++ L
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
++ K LV E L + + + +I++ V G+ Y+++
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELF-----DEIISRKRFSEVDAARIIRQVLSGITYMHKNK- 170
Query: 492 SLIAPHGHIKSSNVLLNESLEPV---LADYGLIPVMNQESAQELMIA---YKSPEFLQLG 545
H +K N+LL + + D+GL + I Y +PE L G
Sbjct: 171 ---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH-G 226
Query: 546 RITKKTDVWSLGVLILEIMTGKFPAN 571
+K DVWS GV++ +++G P N
Sbjct: 227 TYDEKCDVWSTGVILYILLSGCPPFN 252
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 85/206 (41%), Gaps = 20/206 (9%)
Query: 376 ILGSGCFGSSY----KASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+LG G FG K + A+ V+ + + +E ++ L +L HPN++ L
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
++ K LV E L + + + +I++ V G+ Y+++
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELF-----DEIISRKRFSEVDAARIIRQVLSGITYMHKNK- 169
Query: 492 SLIAPHGHIKSSNVLLNESLEPV---LADYGLIPVMNQESAQELMIA---YKSPEFLQLG 545
H +K N+LL + + D+GL + I Y +PE L G
Sbjct: 170 ---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH-G 225
Query: 546 RITKKTDVWSLGVLILEIMTGKFPAN 571
+K DVWS GV++ +++G P N
Sbjct: 226 TYDEKCDVWSTGVILYILLSGCPPFN 251
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQ-EHMRRLGRLRHPNLLPLVA 432
E LG+G + + YK + +TG + +K K + G + + L+H N++ L
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYD 70
Query: 433 YYYRKEEKLLVHEFVP---KRSLAVNLHGHQALGQPSLDWPSRLKIVK----GVAKGLQY 485
+ + + LV EF+ K+ + G+ G L +VK + +GL +
Sbjct: 71 VIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGL-------ELNLVKYFQWQLLQGLAF 123
Query: 486 LYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKSPE 540
+ H +K N+L+N+ + L D+GL IPV N S++ + + Y++P+
Sbjct: 124 CHEN----KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV-NTFSSEVVTLWYRAPD 178
Query: 541 FLQLGRI-TKKTDVWSLGVLILEIMTGK--FPAN 571
L R + D+WS G ++ E++TGK FP
Sbjct: 179 VLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGT 212
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
+++G+G FG Y+A L +G ++ +K+ Q E Q MR+L H N++ L
Sbjct: 104 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI-MRKLD---HCNIVRLRY 159
Query: 433 YYYRKEEKL------LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
++Y EK LV ++VP+ V H SR K V Y+
Sbjct: 160 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY------------SRAKQTLPVIYVKLYM 207
Query: 487 YRELPSLIAPHGH------IKSSNVLLNESLEPV-LADYGLIPVMNQESAQELMIA---Y 536
Y+ SL H IK N+LL+ + L D+G + + I Y
Sbjct: 208 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 267
Query: 537 KSPEFL-QLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
++PE + T DVWS G ++ E++ G+ FP +
Sbjct: 268 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 305
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 87
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 130
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E A +
Sbjct: 131 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR 186
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 28/202 (13%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRR---LGRLRHPNLLPLVAY 433
LG G FG YKA +++ K ++ EE +++M L HPN++ L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAA--KVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 434 YYRKEEKLLVHEFVPKRSL-AVNLHGHQALGQPSLDWPSRLKIV-KGVAKGLQYLYRELP 491
+Y + ++ EF ++ AV L + L + S++++V K L YL+
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTE------SQIQVVCKQTLDALNYLHDN-- 154
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSPEFLQ----LGRI 547
+I H +K+ N+L + LAD+G + N + Q +P ++ +
Sbjct: 155 KII--HRDLKAGNILFTLDGDIKLADFG-VSAKNTRTIQRRDSFIGTPYWMAPEVVMCET 211
Query: 548 TK------KTDVWSLGVLILEI 563
+K K DVWSLG+ ++E+
Sbjct: 212 SKDRPYDYKADVWSLGITLIEM 233
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 87
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 130
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E A +
Sbjct: 131 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR 186
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 32/212 (15%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRF---KQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
E +G G +G YKA + G +K+ K+ + +E + L L+H N++ L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIRE-ISILKELKHSNIVKLY 66
Query: 432 AYYYRKEEKLLVHEFVP---KRSLAVNLHGHQALGQPSLDWPSRLKIVKGVA--KGLQYL 486
+ K+ +LV E + K+ L V G +++ S L+++ G+A + L
Sbjct: 67 DVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSF----LLQLLNGIAYCHDRRVL 122
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKSPEF 541
+R+L K N+L+N E +AD+GL IPV + + + + + Y++P+
Sbjct: 123 HRDL----------KPQNLLINREGELKIADFGLARAFGIPV-RKYTHEIVTLWYRAPDV 171
Query: 542 LQLGRITKKT-DVWSLGVLILEIMTGK--FPA 570
L + T D+WS+G + E++ G FP
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPG 203
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRR---LGRLRHPNLLPL 430
+ILG G F + A L+T +K ++ + + + R + RL HP + L
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVN---LHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ ++ +EKL S A N L + +G S D + L+YL+
Sbjct: 95 Y-FTFQDDEKLYF-----GLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 146
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL------MIAYKSPEF 541
+ +I H +K N+LLNE + + D+G V++ ES Q Y SPE
Sbjct: 147 GK--GII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 202
Query: 542 LQLGRITKKTDVWSLGVLILEIMTG 566
L K +D+W+LG +I +++ G
Sbjct: 203 LTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
+++G+G FG Y+A L +G ++ +K+ Q E Q MR+L H N++ L
Sbjct: 30 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI-MRKLD---HCNIVRLRY 85
Query: 433 YYYRKEEKL------LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
++Y EK LV ++VP+ V H SR K V Y+
Sbjct: 86 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY------------SRAKQTLPVIYVKLYM 133
Query: 487 YRELPSLIAPHGH------IKSSNVLLNESLEPV-LADYGLIPVMNQESAQELMIA---Y 536
Y+ SL H IK N+LL+ + L D+G + + I Y
Sbjct: 134 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 193
Query: 537 KSPEFL-QLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
++PE + T DVWS G ++ E++ G+ FP +
Sbjct: 194 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 231
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRR---LGRLRHPNLLPL 430
+ILG G F + A L+T +K ++ + + + R + RL HP + L
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVN---LHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ ++ +EKL S A N L + +G S D + L+YL+
Sbjct: 95 Y-FTFQDDEKLYF-----GLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 146
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL------MIAYKSPEF 541
+ +I H +K N+LLNE + + D+G V++ ES Q Y SPE
Sbjct: 147 GK--GII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 202
Query: 542 LQLGRITKKTDVWSLGVLILEIMTG 566
L K +D+W+LG +I +++ G
Sbjct: 203 LTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 85/206 (41%), Gaps = 20/206 (9%)
Query: 376 ILGSGCFGSSY----KASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+LG G FG K + A+ V+ + + +E ++ L +L HPN++ L
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
++ K LV E L + + + +I++ V G+ Y+++
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELF-----DEIISRKRFSEVDAARIIRQVLSGITYMHKNK- 146
Query: 492 SLIAPHGHIKSSNVLLNESLEPV---LADYGLIPVMNQESAQELMIA---YKSPEFLQLG 545
H +K N+LL + + D+GL + I Y +PE L G
Sbjct: 147 ---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH-G 202
Query: 546 RITKKTDVWSLGVLILEIMTGKFPAN 571
+K DVWS GV++ +++G P N
Sbjct: 203 TYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
+++G+G FG Y+A L +G ++ +K+ Q E Q MR+L H N++ L
Sbjct: 38 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI-MRKLD---HCNIVRLRY 93
Query: 433 YYYRKEEKL------LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
++Y EK LV ++VP+ V H SR K V Y+
Sbjct: 94 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY------------SRAKQTLPVIYVKLYM 141
Query: 487 YRELPSLIAPHGH------IKSSNVLLNESLEPV-LADYGLIPVMNQESAQELMIA---Y 536
Y+ SL H IK N+LL+ + L D+G + + I Y
Sbjct: 142 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 201
Query: 537 KSPEFL-QLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
++PE + T DVWS G ++ E++ G+ FP +
Sbjct: 202 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 239
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 28/202 (13%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRR---LGRLRHPNLLPLVAY 433
LG G FG YKA +++ K ++ EE +++M L HPN++ L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAA--KVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 434 YYRKEEKLLVHEFVPKRSL-AVNLHGHQALGQPSLDWPSRLKIV-KGVAKGLQYLYRELP 491
+Y + ++ EF ++ AV L + L + S++++V K L YL+
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTE------SQIQVVCKQTLDALNYLHDN-- 154
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSPEFLQ----LGRI 547
+I H +K+ N+L + LAD+G + N Q +P ++ +
Sbjct: 155 KII--HRDLKAGNILFTLDGDIKLADFG-VSAKNTRXIQRRDXFIGTPYWMAPEVVMCET 211
Query: 548 TK------KTDVWSLGVLILEI 563
+K K DVWSLG+ ++E+
Sbjct: 212 SKDRPYDYKADVWSLGITLIEM 233
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
+++G+G FG Y+A L +G ++ +K+ Q E Q MR+L H N++ L
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI-MRKLD---HCNIVRLRY 92
Query: 433 YYYRKEEKL------LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
++Y EK LV ++VP+ V H SR K V Y+
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY------------SRAKQTLPVIYVKLYM 140
Query: 487 YRELPSLIAPHGH------IKSSNVLLNESLEPV-LADYGLIPVMNQESAQELMIA---Y 536
Y+ SL H IK N+LL+ + L D+G + + I Y
Sbjct: 141 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 200
Query: 537 KSPEFL-QLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
++PE + T DVWS G ++ E++ G+ FP +
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 238
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
+++G+G FG Y+A L +G ++ +K+ Q E Q MR+L H N++ L
Sbjct: 33 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI-MRKLD---HCNIVRLRY 88
Query: 433 YYYRKEEKL------LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
++Y EK LV ++VP+ V H SR K V Y+
Sbjct: 89 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY------------SRAKQTLPVIYVKLYM 136
Query: 487 YRELPSLIAPHGH------IKSSNVLLNESLEPV-LADYGLIPVMNQESAQELMIA---Y 536
Y+ SL H IK N+LL+ + L D+G + + I Y
Sbjct: 137 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 196
Query: 537 KSPEFL-QLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
++PE + T DVWS G ++ E++ G+ FP +
Sbjct: 197 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 234
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
+++G+G FG Y+A L +G ++ +K+ Q E Q MR+L H N++ L
Sbjct: 44 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI-MRKLD---HCNIVRLRY 99
Query: 433 YYYRKEEKL------LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
++Y EK LV ++VP+ V H SR K V Y+
Sbjct: 100 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY------------SRAKQTLPVIYVKLYM 147
Query: 487 YRELPSLIAPHGH------IKSSNVLLNESLEPV-LADYGLIPVMNQESAQELMIA---Y 536
Y+ SL H IK N+LL+ + L D+G + + I Y
Sbjct: 148 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 207
Query: 537 KSPEFL-QLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
++PE + T DVWS G ++ E++ G+ FP +
Sbjct: 208 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 245
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 83
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 84 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 126
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E A +
Sbjct: 127 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR 182
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
+++G+G FG Y+A L +G ++ +K+ Q E Q MR+L H N++ L
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI-MRKLD---HCNIVRLRY 92
Query: 433 YYYRKEEKL------LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
++Y EK LV ++VP+ V H SR K V Y+
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY------------SRAKQTLPVIYVKLYM 140
Query: 487 YRELPSLIAPHGH------IKSSNVLLNESLEPV-LADYGLIPVMNQESAQELMIA---Y 536
Y+ SL H IK N+LL+ + L D+G + + I Y
Sbjct: 141 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 200
Query: 537 KSPEFL-QLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
++PE + T DVWS G ++ E++ G+ FP +
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 238
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
+++G+G FG Y+A L +G ++ +K+ Q E Q MR+L H N++ L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI-MRKLD---HCNIVRLRY 80
Query: 433 YYYRKEEKL------LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
++Y EK LV ++VP+ V H SR K V Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY------------SRAKQTLPVIYVKLYM 128
Query: 487 YRELPSLIAPHGH------IKSSNVLLNESLEPV-LADYGLIPVMNQESAQELMIA---Y 536
Y+ SL H IK N+LL+ + L D+G + + I Y
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 188
Query: 537 KSPEFL-QLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
++PE + T DVWS G ++ E++ G+ FP +
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
+++G+G FG Y+A L +G ++ +K+ Q E Q MR+L H N++ L
Sbjct: 29 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI-MRKLD---HCNIVRLRY 84
Query: 433 YYYRKEEKL------LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
++Y EK LV ++VP+ V H SR K V Y+
Sbjct: 85 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY------------SRAKQTLPVIYVKLYM 132
Query: 487 YRELPSLIAPHGH------IKSSNVLLNESLEPV-LADYGLIPVMNQESAQELMIA---Y 536
Y+ SL H IK N+LL+ + L D+G + + I Y
Sbjct: 133 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 192
Query: 537 KSPEFL-QLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
++PE + T DVWS G ++ E++ G+ FP +
Sbjct: 193 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 230
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
+++G+G FG Y+A L +G ++ +K+ Q E Q MR+L H N++ L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI-MRKLD---HCNIVRLRY 80
Query: 433 YYYRKEEKL------LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
++Y EK LV ++VP+ V H SR K V Y+
Sbjct: 81 FFYSSGEKKDVVYLNLVLDYVPETVYRVARHY------------SRAKQTLPVIYVKLYM 128
Query: 487 YRELPSLIAPHGH------IKSSNVLLNESLEPV-LADYGLIPVMNQESAQELMIA---Y 536
Y+ SL H IK N+LL+ + L D+G + + I Y
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 188
Query: 537 KSPEFL-QLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
++PE + T DVWS G ++ E++ G+ FP +
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
+++G+G FG Y+A L +G ++ +K+ Q E Q MR+L H N++ L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI-MRKLD---HCNIVRLRY 80
Query: 433 YYYRKEEKL------LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
++Y EK LV ++VP+ V H SR K V Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY------------SRAKQTLPVIYVKLYM 128
Query: 487 YRELPSLIAPHGH------IKSSNVLLNESLEPV-LADYGLIPVMNQESAQELMIA---Y 536
Y+ SL H IK N+LL+ + L D+G + + I Y
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 188
Query: 537 KSPEFL-QLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
++PE + T DVWS G ++ E++ G+ FP +
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
+++G+G FG Y+A L +G ++ +K+ Q E Q MR+L H N++ L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI-MRKLD---HCNIVRLRY 80
Query: 433 YYYRKEEKL------LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
++Y EK LV ++VP+ V H SR K V Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY------------SRAKQTLPVIYVKLYM 128
Query: 487 YRELPSLIAPHGH------IKSSNVLLNESLEPV-LADYGLIPVMNQESAQELMIA---Y 536
Y+ SL H IK N+LL+ + L D+G + + I Y
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 188
Query: 537 KSPEFL-QLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
++PE + T DVWS G ++ E++ G+ FP +
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
+++G+G FG Y+A L +G ++ +K+ Q E Q MR+L H N++ L
Sbjct: 26 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI-MRKLD---HCNIVRLRY 81
Query: 433 YYYRKEEKL------LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
++Y EK LV ++VP+ V H SR K V Y+
Sbjct: 82 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY------------SRAKQTLPVIYVKLYM 129
Query: 487 YRELPSLIAPHGH------IKSSNVLLNESLEPV-LADYGLIPVMNQESAQELMIA---Y 536
Y+ SL H IK N+LL+ + L D+G + + I Y
Sbjct: 130 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 189
Query: 537 KSPEFL-QLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
++PE + T DVWS G ++ E++ G+ FP +
Sbjct: 190 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 227
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 16/200 (8%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKRF--KQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
+G G F A + TG + VK Q+N+ ++ +R + L HPN++ L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
++ LV E+ + L H + + +R K + + +QY +++
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE----ARAKF-RQIVSAVQYCHQKF--- 133
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGL---IPVMNQESAQELMIAYKSPEFLQLGRIT-K 549
H +K+ N+LL+ + +AD+G N+ A Y +PE Q +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 550 KTDVWSLGVLILEIMTGKFP 569
+ DVWSLGV++ +++G P
Sbjct: 193 EVDVWSLGVILYTLVSGSLP 212
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRR----LGRLRHPNLLP 429
+ LG G FG A +T V + + + + Q + R L LRHP+++
Sbjct: 19 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 78
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L K+E ++V E+ A N + + + + + + ++Y +R
Sbjct: 79 LYDVIKSKDEIIMVIEY------AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 132
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA---YKSPEFLQLGR 546
H +K N+LL+E L +AD+GL +M + + Y +PE + G+
Sbjct: 133 K----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVIS-GK 187
Query: 547 ITK--KTDVWSLGVLILEIMTGKFP 569
+ + DVWS GV++ ++ + P
Sbjct: 188 LYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 28/202 (13%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRR---LGRLRHPNLLPLVAY 433
LG G FG YKA +++ K ++ EE +++M L HPN++ L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAA--KVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 434 YYRKEEKLLVHEFVPKRSL-AVNLHGHQALGQPSLDWPSRLKIV-KGVAKGLQYLYRELP 491
+Y + ++ EF ++ AV L + L + S++++V K L YL+
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTE------SQIQVVCKQTLDALNYLHDN-- 154
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSPEFLQ----LGRI 547
+I H +K+ N+L + LAD+G + N Q +P ++ +
Sbjct: 155 KII--HRDLKAGNILFTLDGDIKLADFG-VSAKNTRXIQRRDSFIGTPYWMAPEVVMCET 211
Query: 548 TK------KTDVWSLGVLILEI 563
+K K DVWSLG+ ++E+
Sbjct: 212 SKDRPYDYKADVWSLGITLIEM 233
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRR----LGRLRHPNLLP 429
+ LG G FG A +T V + + + + Q + R L LRHP+++
Sbjct: 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 77
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L K+E ++V E+ A N + + + + + + ++Y +R
Sbjct: 78 LYDVIKSKDEIIMVIEY------AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 131
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA---YKSPEFLQLGR 546
H +K N+LL+E L +AD+GL +M + + Y +PE + G+
Sbjct: 132 K----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVIS-GK 186
Query: 547 ITK--KTDVWSLGVLILEIMTGKFP 569
+ + DVWS GV++ ++ + P
Sbjct: 187 LYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 92
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 93 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 135
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 136 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR 191
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
+++G+G FG Y+A L +G ++ +K+ Q E Q MR+L H N++ L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQI-MRKLD---HCNIVRLRY 80
Query: 433 YYYRKEEKL------LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
++Y EK LV ++VP+ V H SR K V Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY------------SRAKQTLPVIYVKLYM 128
Query: 487 YRELPSLIAPHGH------IKSSNVLLNESLEPV-LADYGLIPVMNQESAQELMIA---Y 536
Y+ SL H IK N+LL+ + L D+G + + I Y
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 188
Query: 537 KSPEFL-QLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
++PE + T DVWS G ++ E++ G+ FP +
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 48/220 (21%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 99
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 100 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 142
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 143 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 198
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 199 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 48/220 (21%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 99
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 100 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 142
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 143 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 198
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 199 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 87
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 130
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 131 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 97
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 98 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 140
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 141 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 196
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 197 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 234
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 48/220 (21%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 98
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 99 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 141
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 142 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 197
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 198 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 237
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 48/220 (21%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 89
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 90 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 132
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 133 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 188
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 87
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 130
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 131 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR 186
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 48/220 (21%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 87
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 130
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 131 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 87
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 130
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 131 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 46/219 (21%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKRF-KQMNNV--GREEFQEHMRRLGRLRHPNLLPLVA 432
+GSG +GS A TG + VK+ K ++ + ++E +R L ++H N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 100
Query: 433 YYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKIV 476
F P RSL V L H Q L + + ++
Sbjct: 101 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LI 143
Query: 477 KGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA- 535
+ +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 144 YQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW 199
Query: 536 YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 87
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 130
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 131 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 19/217 (8%)
Query: 377 LGSGCFGSSYKASL-STGAMMVVKR--FKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
+G+G +G K S G ++V K + M ++ + L L+HPN+ V Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI---VRY 70
Query: 434 YYRKEEK-----LLVHEFVPKRSLA-VNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
Y R ++ +V E+ LA V G + + LD L+++ + L+ +
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKE--RQYLDEEFVLRVMTQLTLALKECH 128
Query: 488 RELPS-LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES--AQELMIA--YKSPEFL 542
R H +K +NV L+ L D+GL ++N + A+E + Y SPE +
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQM 188
Query: 543 QLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKA 579
+K+D+WSLG L+ E+ P Q + A
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELA 225
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 92
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 93 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 135
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 136 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 191
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 86
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 87 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 129
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 130 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 185
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 186 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 223
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
+++G+G FG Y+A L +G ++ +K+ Q E Q MR+L H N++ L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQI-MRKLD---HCNIVRLRY 80
Query: 433 YYYRKEEKL------LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
++Y EK LV ++VP+ V H SR K V Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY------------SRAKQTLPVIYVKLYM 128
Query: 487 YRELPSLIAPHGH------IKSSNVLLNESLEPV-LADYGLIPVMNQESAQELMIA---Y 536
Y+ SL H IK N+LL+ + L D+G + + I Y
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 188
Query: 537 KSPEFL-QLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
++PE + T DVWS G ++ E++ G+ FP +
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 87
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 130
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 131 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 48/220 (21%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 89
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 90 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 132
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 133 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 188
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 48/220 (21%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 87
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 130
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 131 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 94
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 95 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 137
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 138 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 193
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 87
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 130
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 131 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 48/220 (21%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 89
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 90 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 132
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 133 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 188
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRR----LGRLRHPNLLP 429
+ LG G FG A +T V + + + + Q + R L LRHP+++
Sbjct: 13 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 72
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L K+E ++V E+ A N + + + + + + ++Y +R
Sbjct: 73 LYDVIKSKDEIIMVIEY------AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 126
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA---YKSPEFLQLGR 546
H +K N+LL+E L +AD+GL +M + + Y +PE + G+
Sbjct: 127 K----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVIS-GK 181
Query: 547 ITK--KTDVWSLGVLILEIMTGKFP 569
+ + DVWS GV++ ++ + P
Sbjct: 182 LYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 87
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 130
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 131 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 187 WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 48/220 (21%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 93
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 94 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 136
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 137 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 192
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 110
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 111 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 153
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 154 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR 209
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 210 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 247
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 36/221 (16%)
Query: 377 LGSGCFGSSYKA------SLSTGAMMVVKRFKQMNNVGRE-EFQEHMRRLGRLRHPNLLP 429
+G G FG ++A M+ VK K+ + + +FQ + +PN++
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 430 LVAYYYRKEEKLLVHEFVPK-------RSLA---VNLHGHQAL---------GQPSLDWP 470
L+ + L+ E++ RS++ V H L G P L
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 471 SRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL------IPVM 524
+L I + VA G+ YL + H + + N L+ E++ +AD+GL
Sbjct: 175 EQLCIARQVAAGMAYLSER--KFV--HRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 525 NQESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + I + PE + R T ++DVW+ GV++ EI +
Sbjct: 231 KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 93
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 94 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 136
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 137 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 192
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 48/220 (21%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 106
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 107 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 149
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 150 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 205
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 206 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 245
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 26/215 (12%)
Query: 376 ILGSGCFGSSYKASLST--GAMM-VVKRFKQMNNVGREEFQEHMRRLGRLR---HPNLLP 429
+LG G FGS +A L G+ + V + + + + + +E +R ++ HP++
Sbjct: 30 MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89
Query: 430 LVAYYYRKEEK------LLVHEFVPKRSLAVNLHGHQALGQPSLDWP--SRLKIVKGVAK 481
LV R K +++ F+ L L + +G+ + P + ++ + +A
Sbjct: 90 LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASR-IGENPFNLPLQTLVRFMVDIAC 148
Query: 482 GLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI------PVMNQESAQELMIA 535
G++YL S H + + N +L E + +AD+GL Q A +L +
Sbjct: 149 GMEYL----SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVK 204
Query: 536 YKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFP 569
+ + E L T +DVW+ GV + EIMT G+ P
Sbjct: 205 WLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 48/220 (21%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 98
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 99 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 141
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 142 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR 197
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 198 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 237
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 48/220 (21%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 107
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 108 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 150
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 151 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR 206
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 246
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 92
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 93 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 135
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 136 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR 191
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 87
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 130
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 131 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 48/220 (21%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 107
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 108 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 150
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 151 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 206
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 246
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 48/220 (21%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 107
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 108 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 150
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 151 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 206
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 246
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 87
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF-----L 130
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 131 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 93
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 94 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 136
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 137 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 192
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRR----LGRLRHPNLLP 429
+ LG G FG A +T V + + + + Q + R L LRHP+++
Sbjct: 9 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 68
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
L K+E ++V E+ A N + + + + + + ++Y +R
Sbjct: 69 LYDVIKSKDEIIMVIEY------AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 122
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA---YKSPEFLQLGR 546
H +K N+LL+E L +AD+GL +M + + Y +PE + G+
Sbjct: 123 K----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVIS-GK 177
Query: 547 ITK--KTDVWSLGVLILEIMTGKFP 569
+ + DVWS GV++ ++ + P
Sbjct: 178 LYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 48/220 (21%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 106
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 107 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 149
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 150 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 205
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 206 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 245
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 48/220 (21%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 110
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 111 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 153
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 154 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 209
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 210 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 249
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 84
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 85 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 127
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 128 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 183
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 184 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 221
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 87
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF-----L 130
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 131 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR 186
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 92
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 93 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 135
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 136 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 191
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 56/222 (25%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 94
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 95 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 137
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL--M 533
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + +A E+
Sbjct: 138 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTADEMTGY 189
Query: 534 IA---YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
+A Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 92/218 (42%), Gaps = 36/218 (16%)
Query: 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
+++G+G FG Y+A L +G ++ +K+ Q E Q MR+L H N++ L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQI-MRKLD---HCNIVRLRY 80
Query: 433 YYYRKEEKL------LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
++Y EK LV ++VP V H SR K V Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPATVYRVARHY------------SRAKQTLPVIYVKLYM 128
Query: 487 YRELPSLIAPHGH------IKSSNVLLNESLEPV-LADYGLIPVMNQESAQELMIA---Y 536
Y+ SL H IK N+LL+ + L D+G + + I Y
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 188
Query: 537 KSPEFL-QLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
++PE + T DVWS G ++ E++ G+ FP +
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 19/204 (9%)
Query: 375 EILGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGRE--EFQEHMRRLGRLRHPNLLPLV 431
E +G+G F A + TG M+ +K + N +G + + + L LRH ++ L
Sbjct: 16 ETIGTGGFAKVKLACHILTGEMVAIKIMDK-NTLGSDLPRIKTEIEALKNLRHQHICQLY 74
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+ P L + + Q L + + + + Y++ +
Sbjct: 75 HVLETANKIFMVLEYCPGGELFDYI-----ISQDRLSEEETRVVFRQIVSAVAYVHSQGY 129
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLI--PVMNQESAQELM---IAYKSPEFLQ-LG 545
+ H +K N+L +E + L D+GL P N++ + +AY +PE +Q
Sbjct: 130 A----HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKS 185
Query: 546 RITKKTDVWSLGVLILEIMTGKFP 569
+ + DVWS+G+L+ +M G P
Sbjct: 186 YLGSEADVWSMGILLYVLMCGFLP 209
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 56/222 (25%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 94
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 95 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 137
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL--M 533
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + +A E+
Sbjct: 138 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTADEMTGY 189
Query: 534 IA---YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
+A Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 83
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 84 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 126
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 127 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 182
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 56/222 (25%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 94
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 95 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 137
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL--M 533
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + +A E+
Sbjct: 138 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTADEMTGY 189
Query: 534 IA---YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
+A Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 33/220 (15%)
Query: 377 LGSGCFGS---SYKASL--STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS +Y A L + + F+ + + R ++E +R L L+H N++ L+
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIH-ARRTYRE-LRLLKHLKHENVIGLL 85
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGH--------QALGQPSLDWPSRLKIVKGVAKGL 483
+ + +F + L L G QAL + + +V + +GL
Sbjct: 86 DVFTPATS---IEDF-SEVYLVTTLMGADLNNIVKCQALSDEHVQF-----LVYQLLRGL 136
Query: 484 QYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEF- 541
+Y++ S H +K SNV +NE E + D+GL ++E + Y++PE
Sbjct: 137 KYIH----SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPEIM 192
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGK--FP-ANFLQQGKK 578
L + D+WS+G ++ E++ GK FP ++++ Q K+
Sbjct: 193 LNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKR 232
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 98/223 (43%), Gaps = 44/223 (19%)
Query: 375 EILGSGCFGSSYKASLST-GAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
E++GSG FG +KA G V++R K N E+ + ++ L +L H N++
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN----EKAEREVKALAKLDHVNIVHYNGC 73
Query: 434 Y---------------------------YRKEEKLLV--HEFVPKRSLAVNLHGHQALGQ 464
+ R + K L EF K +L + +
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG--- 130
Query: 465 PSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM 524
LD L++ + + KG+ Y++ + LI H +K SN+ L ++ + + D+GL+ +
Sbjct: 131 EKLDKVLALELFEQITKGVDYIHSK--KLI--HRDLKPSNIFLVDTKQVKIGDFGLVTSL 186
Query: 525 NQE---SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIM 564
+ + + + Y SPE + K+ D+++LG+++ E++
Sbjct: 187 KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 48/220 (21%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 85
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 86 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 128
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 129 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 184
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 185 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 224
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 84
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 85 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 127
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 128 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 183
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 184 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 221
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 19/217 (8%)
Query: 377 LGSGCFGSSYKASL-STGAMMVVKR--FKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
+G+G +G K S G ++V K + M ++ + L L+HPN+ V Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI---VRY 70
Query: 434 YYRKEEK-----LLVHEFVPKRSLA-VNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
Y R ++ +V E+ LA V G + + LD L+++ + L+ +
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKE--RQYLDEEFVLRVMTQLTLALKECH 128
Query: 488 RELPS-LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFL 542
R H +K +NV L+ L D+GL ++N +++ Y SPE +
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQM 188
Query: 543 QLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKA 579
+K+D+WSLG L+ E+ P Q + A
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELA 225
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 475 IVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMI 534
I++ + KGL YL+ E H IK++NVLL+E + LAD+G+ + +
Sbjct: 121 ILREILKGLDYLHSERKI----HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXF 176
Query: 535 A----YKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFP 569
+ +PE ++ K D+WSLG+ +E+ G+ P
Sbjct: 177 VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 83
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 84 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 126
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 127 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 182
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 48/220 (21%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 87
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQF-----L 130
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 131 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR 186
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 19/217 (8%)
Query: 377 LGSGCFGSSYKASL-STGAMMVVKR--FKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
+G+G +G K S G ++V K + M ++ + L L+HPN+ V Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI---VRY 70
Query: 434 YYRKEEK-----LLVHEFVPKRSLA-VNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
Y R ++ +V E+ LA V G + + LD L+++ + L+ +
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKE--RQYLDEEFVLRVMTQLTLALKECH 128
Query: 488 RELPS-LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFL 542
R H +K +NV L+ L D+GL ++N +++ Y SPE +
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQM 188
Query: 543 QLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKA 579
+K+D+WSLG L+ E+ P Q + A
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELA 225
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 85/204 (41%), Gaps = 18/204 (8%)
Query: 376 ILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYY 434
+LG G +G Y LS + +K + ++ + E + L+H N++ + +
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 435 YRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKI-VKGVAKGLQYLYRELPSL 493
+ E VP SL+ L P D + K + +GL+YL+
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWG---PLKDNEQTIGFYTKQILEGLKYLHDNQ--- 142
Query: 494 IAPHGHIKSSNVLLNESLEPVL--ADYG----LIPVMNQESAQELMIAYKSPEFLQLGR- 546
H IK NVL+N + VL +D+G L + + Y +PE + G
Sbjct: 143 -IVHRDIKGDNVLIN-TYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR 200
Query: 547 -ITKKTDVWSLGVLILEIMTGKFP 569
K D+WSLG I+E+ TGK P
Sbjct: 201 GYGKAADIWSLGCTIIEMATGKPP 224
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 474 KIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM 533
KI + K L++L+ +L + H +K SNVL+N + + D+G+ + + A+++
Sbjct: 113 KIAVSIVKALEHLHSKLSVI---HRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID 169
Query: 534 IAYK--------SPEFLQLGRITKKTDVWSLGVLILEIMTGKFPAN 571
K +PE Q G + K+D+WSLG+ ++E+ +FP +
Sbjct: 170 AGCKPYMAPERINPELNQKGY-SVKSDIWSLGITMIELAILRFPYD 214
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 48/220 (21%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 89
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 90 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 132
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 133 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR 188
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 35/207 (16%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN--VGREEFQEHMRRLGRLRHPNLLPLVAY 433
+G G +G +K + TG ++ +K+F + + V ++ +R L +L+HPNL+ L+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
+ RK LV E+ L L +Q G P +VK + ++ L ++
Sbjct: 71 FRRKRRLHLVFEYCDHTVLH-ELDRYQR-GVPE-------HLVKSIT------WQTLQAV 115
Query: 494 IAPHGH------IKSSNVLLNESLEPVLADYGLIPVMNQES----AQELMIAYKSPEFL- 542
H H +K N+L+ + L D+G ++ S + Y+SPE L
Sbjct: 116 NFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLV 175
Query: 543 ---QLGRITKKTDVWSLGVLILEIMTG 566
Q G DVW++G + E+++G
Sbjct: 176 GDTQYG---PPVDVWAIGCVFAELLSG 199
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 20/206 (9%)
Query: 376 ILGSGCFGSSY----KASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+LG G FG K + A+ V+ + + +E ++ L +L HPN+ L
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
++ K LV E L + + + +I++ V G+ Y ++
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELF-----DEIISRKRFSEVDAARIIRQVLSGITYXHKNK- 146
Query: 492 SLIAPHGHIKSSNVLLNESLEPV---LADYGLIPVMNQESAQELMIA---YKSPEFLQLG 545
H +K N+LL + + D+GL + I Y +PE L G
Sbjct: 147 ---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLH-G 202
Query: 546 RITKKTDVWSLGVLILEIMTGKFPAN 571
+K DVWS GV++ +++G P N
Sbjct: 203 TYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 85/206 (41%), Gaps = 20/206 (9%)
Query: 376 ILGSGCFGSSY----KASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+LG G FG K + A+ V+ + + +E ++ L +L HPN++ L
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
++ K LV E L + + + +I++ V G+ Y+++
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELF-----DEIISRKRFSEVDAARIIRQVLSGITYMHKNK- 152
Query: 492 SLIAPHGHIKSSNVLLNESLEPV---LADYGLIPVMNQESAQELMIA---YKSPEFLQLG 545
H +K N+LL + + D+GL + I Y +PE L G
Sbjct: 153 ---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH-G 208
Query: 546 RITKKTDVWSLGVLILEIMTGKFPAN 571
+K DVWS GV++ +++G P N
Sbjct: 209 TYDEKCDVWSTGVILYILLSGCPPFN 234
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 93
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 94 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 136
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 137 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR 192
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 16/200 (8%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKRF--KQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
+G G F A + TG + VK Q+N+ ++ +R + L HPN++ L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
++ LV E+ + L H + + +R K + + +QY +++
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE----ARAKF-RQIVSAVQYCHQKF--- 133
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA---YKSPEFLQLGRIT-K 549
H +K+ N+LL+ + +AD+G + + Y +PE Q +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 550 KTDVWSLGVLILEIMTGKFP 569
+ DVWSLGV++ +++G P
Sbjct: 193 EVDVWSLGVILYTLVSGSLP 212
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 16/200 (8%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKRF--KQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
+G G F A + TG + VK Q+N ++ +R + L HPN++ L
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
++ LV E+ + L H + + +R K + + +QY +++
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE----ARAKF-RQIVSAVQYCHQKY--- 134
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGL---IPVMNQESAQELMIAYKSPEFLQLGRIT-K 549
H +K+ N+LL+ + +AD+G V N+ Y +PE Q +
Sbjct: 135 -IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGP 193
Query: 550 KTDVWSLGVLILEIMTGKFP 569
+ DVWSLGV++ +++G P
Sbjct: 194 EVDVWSLGVILYTLVSGSLP 213
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 16/200 (8%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKRF--KQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
+G G F A + TG + VK Q+N+ ++ +R + L HPN++ L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
++ LV E+ + L H + + +R K + + +QY +++
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE----ARAKF-RQIVSAVQYCHQKF--- 133
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA---YKSPEFLQLGRIT-K 549
H +K+ N+LL+ + +AD+G + + Y +PE Q +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 550 KTDVWSLGVLILEIMTGKFP 569
+ DVWSLGV++ +++G P
Sbjct: 193 EVDVWSLGVILYTLVSGSLP 212
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 16/212 (7%)
Query: 365 DLHDLLRASAEILGSGCFGSSYKA-SLSTGAMMVVKRF--KQMNNVGREEFQEHMRRLGR 421
DLH + +G G F A + TG + VK Q+N+ ++ +R +
Sbjct: 3 DLHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKV 62
Query: 422 LRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAK 481
L HPN++ L ++ LV E+ + L H + + +R K + +
Sbjct: 63 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKE----ARAKF-RQIVS 117
Query: 482 GLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA---YKS 538
+QY +++ H +K+ N+LL+ + +AD+G + + Y +
Sbjct: 118 AVQYCHQKF----IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAA 173
Query: 539 PEFLQLGRIT-KKTDVWSLGVLILEIMTGKFP 569
PE Q + + DVWSLGV++ +++G P
Sbjct: 174 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 205
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFK-QMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
E+ G FG +KA L + VK F Q + E++ + L ++H N+L +
Sbjct: 30 EVKARGRFGCVWKAQL-LNEYVAVKIFPIQDKQSWQNEYE--VYSLPGMKHENILQFIGA 86
Query: 434 YYRKE----EKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE 489
R + L+ F K SL+ L + + W I + +A+GL YL+ +
Sbjct: 87 EKRGTSVDVDLWLITAFHEKGSLSDFLKAN------VVSWNELCHIAETMARGLAYLHED 140
Query: 490 LPSL------IAPHGHIKSSNVLLNESLEPVLADYGL 520
+P L H IKS NVLL +L +AD+GL
Sbjct: 141 IPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL 177
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 92/224 (41%), Gaps = 25/224 (11%)
Query: 357 VRDDVERFDLHDLLRASAEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEH 415
++ +E F+LH ++LG G FG + A T +K K+ + ++ +
Sbjct: 13 IKLKIEDFELH-------KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECT 65
Query: 416 M--RRLGRL--RHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPS 471
M +R+ L HP L + + KE V E++ L ++ D
Sbjct: 66 MVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH-----KFDLSR 120
Query: 472 RLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIP--VMNQESA 529
+ GLQ+L+ S + +K N+LL++ +AD+G+ ++
Sbjct: 121 ATFYAAEIILGLQFLH----SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT 176
Query: 530 QELMIA--YKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPAN 571
E Y +PE L + D WS GVL+ E++ G+ P +
Sbjct: 177 NEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH 220
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 85/204 (41%), Gaps = 18/204 (8%)
Query: 376 ILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYY 434
+LG G +G Y LS + +K + ++ + E + L+H N++ + +
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 435 YRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKI-VKGVAKGLQYLYRELPSL 493
+ E VP SL+ L P D + K + +GL+YL+
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWG---PLKDNEQTIGFYTKQILEGLKYLHDNQ--- 128
Query: 494 IAPHGHIKSSNVLLNESLEPVL--ADYG----LIPVMNQESAQELMIAYKSPEFLQLGR- 546
H IK NVL+N + VL +D+G L + + Y +PE + G
Sbjct: 129 -IVHRDIKGDNVLIN-TYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR 186
Query: 547 -ITKKTDVWSLGVLILEIMTGKFP 569
K D+WSLG I+E+ TGK P
Sbjct: 187 GYGKAADIWSLGCTIIEMATGKPP 210
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 23/215 (10%)
Query: 377 LGSGCFGS---SYKASLSTG-AMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
+GSG +GS +Y A L A+ + R Q R ++E +R L L+H N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRE-LRLLKHLKHENVIGLLD 94
Query: 433 YYYRKEEKLLVHEFVPKRSLA----VNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYR 488
+ E +L N+ QAL + + +V + +GL+Y++
Sbjct: 95 VFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF-----LVYQLLRGLKYIH- 148
Query: 489 ELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEF-LQLGR 546
S H +K SNV +NE E + D+GL ++E + Y++PE L
Sbjct: 149 ---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMH 205
Query: 547 ITKKTDVWSLGVLILEIMTGK--FP-ANFLQQGKK 578
+ D+WS+G ++ E++ GK FP ++++ Q K+
Sbjct: 206 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKR 240
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 33/220 (15%)
Query: 377 LGSGCFGS---SYKASL--STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS +Y A L + + F+ + + R ++E +R L L+H N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIH-ARRTYRE-LRLLKHLKHENVIGLL 93
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGH--------QALGQPSLDWPSRLKIVKGVAKGL 483
+ + +F + L L G QAL + + +V + +GL
Sbjct: 94 DVFTPATS---IEDF-SEVYLVTTLMGADLNNIVKCQALSDEHVQF-----LVYQLLRGL 144
Query: 484 QYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEF- 541
+Y++ S H +K SNV +NE E + D+GL ++E + Y++PE
Sbjct: 145 KYIH----SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIM 200
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGK--FP-ANFLQQGKK 578
L + D+WS+G ++ E++ GK FP ++++ Q K+
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKR 240
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 38/213 (17%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 83
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH-------QALGQPSLDWPSRLKIVKGVA 480
F P RSL V L H + L ++ +
Sbjct: 84 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQIL 131
Query: 481 KGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSP 539
+GL+Y++ S H +K SN+ +NE E + D+GL + E + Y++P
Sbjct: 132 RGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 187
Query: 540 EF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
E L + D+WS+G ++ E++TG+ FP
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 31/221 (14%)
Query: 365 DLHDLLRASAEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN------VGREEFQEHMR 417
D +D+ E LGSG F K STG K K+ + V REE + +
Sbjct: 12 DFYDI----GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 418 RLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVK 477
L ++ H N++ L Y + + +L+ E V L L ++L + +K
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-----SFIK 122
Query: 478 GVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPV----LADYGLIPVMNQESAQELM 533
+ G+ YL+ + + H +K N++L + P+ L D+GL + E E
Sbjct: 123 QILDGVNYLHTKKIA----HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFK 176
Query: 534 IAYKSPEFLQLGRITKK-----TDVWSLGVLILEIMTGKFP 569
+ +PEF+ + + D+WS+GV+ +++G P
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 117/265 (44%), Gaps = 40/265 (15%)
Query: 335 QCSPSSTEAVVGGKKPEIKLSFVRDDVERFDLHDLLRASAEILGSGCFG--SSYKASLST 392
+ P+ T A V K + L R FD+ D E +G+G +G SS + L T
Sbjct: 24 KAEPAHTAASVAAKN--LALLKARSFDVTFDVGDEYEI-IETIGNGAYGVVSSARRRL-T 79
Query: 393 GAMMVVKRFKQMNNV---GREEFQEHMRRLGRLRHPNLL-------PLVAYYYRKEEKLL 442
G + +K+ +V + +E ++ L +H N++ P V Y K ++
Sbjct: 80 GQQVAIKKIPNAFDVVTNAKRTLRE-LKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVV 138
Query: 443 VHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKS 502
+ + L +H Q L + + + + +GL+Y++ S H +K
Sbjct: 139 LDLM--ESDLHQIIHSSQPLTLEHVRY-----FLYQLLRGLKYMH----SAQVIHRDLKP 187
Query: 503 SNVLLNESLEPVLADYGLI------PVMNQESAQELMIA--YKSPEF-LQLGRITKKTDV 553
SN+L+NE+ E + D+G+ P +Q E + Y++PE L L T+ D+
Sbjct: 188 SNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDL 247
Query: 554 WSLGVLILEIMTGK--FPA-NFLQQ 575
WS+G + E++ + FP N++ Q
Sbjct: 248 WSVGCIFGEMLARRQLFPGKNYVHQ 272
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 107/257 (41%), Gaps = 43/257 (16%)
Query: 365 DLHDLLRASAEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN------VGREEFQEHMR 417
D +D+ E LGSG F K STG K K+ + V REE + +
Sbjct: 12 DFYDI----GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 418 RLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVK 477
L ++ H N++ L Y + + +L+ E V L L ++L + +K
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-----SFIK 122
Query: 478 GVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPV----LADYGLIPVMNQESAQELM 533
+ G+ YL+ + + H +K N++L + P+ L D+GL E E
Sbjct: 123 QILDGVNYLHTKKIA----HFDLKPENIMLLDKNIPIPHIKLIDFGL--AHEIEDGVEFK 176
Query: 534 IAYKSPEFLQLGRITKK-----TDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVN 588
+ +PEF+ + + D+WS+GV+ +++G P FL K+
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQ---------- 224
Query: 589 SVLANGDNRTEVFDKEM 605
LAN + + FD+E
Sbjct: 225 ETLANITSVSYDFDEEF 241
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 108/257 (42%), Gaps = 43/257 (16%)
Query: 365 DLHDLLRASAEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN------VGREEFQEHMR 417
D +D+ E LGSG F K STG K K+ + V REE + +
Sbjct: 12 DFYDI----GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 418 RLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVK 477
L ++ H N++ L Y + + +L+ E V L L ++L + +K
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-----SFIK 122
Query: 478 GVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPV----LADYGLIPVMNQESAQELM 533
+ G+ YL+ + + H +K N++L + P+ L D+GL + E E
Sbjct: 123 QILDGVNYLHTKKIA----HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFK 176
Query: 534 IAYKSPEFLQLGRITKK-----TDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVN 588
+ +PEF+ + + D+WS+GV+ +++G P FL K+
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQ---------- 224
Query: 589 SVLANGDNRTEVFDKEM 605
LAN + + FD+E
Sbjct: 225 ETLANITSVSYDFDEEF 241
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 42/266 (15%)
Query: 335 QCSPSSTEAVVGGKKPEIKLSFVRDDVERFDLHDLLRASAEILGSGCFG--SSYKASLST 392
+ P+ T A V K + L R FD+ D E +G+G +G SS + L T
Sbjct: 23 KAEPAHTAASVAAKN--LALLKARSFDVTFDVGDEYEI-IETIGNGAYGVVSSARRRL-T 78
Query: 393 GAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLL-------PLVAYYYRKEEKL 441
G + +K+ F + N R ++ L +H N++ P V Y K +
Sbjct: 79 GQQVAIKKIPNAFDVVTNAKRT--LRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYV 136
Query: 442 LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIK 501
++ + + L +H Q L + + + + +GL+Y++ S H +K
Sbjct: 137 VLD--LMESDLHQIIHSSQPLTLEHVRY-----FLYQLLRGLKYMH----SAQVIHRDLK 185
Query: 502 SSNVLLNESLEPVLADYGLI------PVMNQESAQELMIA--YKSPEF-LQLGRITKKTD 552
SN+L+NE+ E + D+G+ P +Q E + Y++PE L L T+ D
Sbjct: 186 PSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAID 245
Query: 553 VWSLGVLILEIMTGK--FPA-NFLQQ 575
+WS+G + E++ + FP N++ Q
Sbjct: 246 LWSVGCIFGEMLARRQLFPGKNYVHQ 271
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 112/263 (42%), Gaps = 52/263 (19%)
Query: 377 LGSGCFGS---SY--KASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS SY K+ L + + F+ + + R ++E +R L ++H N++ L+
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 116
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P SL V L H Q L + + +
Sbjct: 117 DV------------FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 159
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+GL + E +
Sbjct: 160 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 215
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FPA----NFLQQGKKADGDLASWV 587
Y++PE L D+WS+G ++ E++TG+ FP N LQQ + G + V
Sbjct: 216 WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASV 275
Query: 588 NSVLANGDNRTEVFDKEMADERN 610
S + + + R + +RN
Sbjct: 276 ISRMPSHEARNYINSLPQMPKRN 298
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 23/209 (11%)
Query: 374 AEILGSGCFGSSYKASLS-TGAMMVVK-----RFKQMNNVGREEFQEHMRRLGRLRHPNL 427
+ LG G FG TG + VK + + ++ VG+ + ++ L RHP++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK--IKREIQNLKLFRHPHI 73
Query: 428 LPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ L + +V E+V L + H + + +R ++ + + + Y +
Sbjct: 74 IKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEE----MEAR-RLFQQILSAVDYCH 128
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA---YKSPEFLQL 544
R + H +K NVLL+ + +AD+GL +M+ Y +PE +
Sbjct: 129 RHM----VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVIS- 183
Query: 545 GRITK--KTDVWSLGVLILEIMTGKFPAN 571
GR+ + D+WS GV++ ++ G P +
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-----YKSPEFLQ-----LGR 546
H IK NVLL+ + LAD+G MN + + +A Y SPE LQ +G+
Sbjct: 214 HRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGK 273
Query: 547 ITKKTDVWSLGVLILEIMTGKFP 569
+ D WSLGV + E++ G+ P
Sbjct: 274 YGPECDWWSLGVCMYEMLYGETP 296
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 31/221 (14%)
Query: 365 DLHDLLRASAEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN------VGREEFQEHMR 417
D +D+ E LGSG F K STG K K+ + V REE + +
Sbjct: 12 DFYDI----GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 418 RLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVK 477
L ++ H N++ L Y + + +L+ E V L L ++L + +K
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-----SFIK 122
Query: 478 GVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPV----LADYGLIPVMNQESAQELM 533
+ G+ YL+ + + H +K N++L + P+ L D+GL + E E
Sbjct: 123 QILDGVNYLHTKKIA----HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFK 176
Query: 534 IAYKSPEFLQLGRITKK-----TDVWSLGVLILEIMTGKFP 569
+ +PEF+ + + D+WS+GV+ +++G P
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 87
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 130
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D GL + E +
Sbjct: 131 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR 186
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 87/200 (43%), Gaps = 16/200 (8%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKRF--KQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
+G G F A + TG + V+ Q+N+ ++ +R + L HPN++ L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
++ LV E+ + L H + + +R K + + +QY +++
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE----ARAKF-RQIVSAVQYCHQKF--- 133
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA---YKSPEFLQLGRIT-K 549
H +K+ N+LL+ + +AD+G + + Y +PE Q +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 550 KTDVWSLGVLILEIMTGKFP 569
+ DVWSLGV++ +++G P
Sbjct: 193 EVDVWSLGVILYTLVSGSLP 212
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-----YKSPEFLQ-----LGR 546
H IK NVLL+ + LAD+G MN + + +A Y SPE LQ +G+
Sbjct: 198 HRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGK 257
Query: 547 ITKKTDVWSLGVLILEIMTGKFP 569
+ D WSLGV + E++ G+ P
Sbjct: 258 YGPECDWWSLGVCMYEMLYGETP 280
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 87
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 130
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D GL + E +
Sbjct: 131 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR 186
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 12/106 (11%)
Query: 474 KIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM 533
KI + K L++L+ +L + H +K SNVL+N + + D+G+ + A+ +
Sbjct: 157 KIAVSIVKALEHLHSKLSVI---HRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTID 213
Query: 534 IAYK--------SPEFLQLGRITKKTDVWSLGVLILEIMTGKFPAN 571
K +PE Q G + K+D+WSLG+ ++E+ +FP +
Sbjct: 214 AGCKPYMAPERINPELNQKGY-SVKSDIWSLGITMIELAILRFPYD 258
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 108/257 (42%), Gaps = 43/257 (16%)
Query: 365 DLHDLLRASAEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN------VGREEFQEHMR 417
D +D+ E LGSG F K STG K K+ + V REE + +
Sbjct: 12 DFYDI----GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 418 RLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVK 477
L ++ H N++ L Y + + +L+ E V L L ++L + +K
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-----SFIK 122
Query: 478 GVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPV----LADYGLIPVMNQESAQELM 533
+ G+ YL+ + + H +K N++L + P+ L D+GL + E E
Sbjct: 123 QILDGVNYLHTKKIA----HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFK 176
Query: 534 IAYKSPEFLQLGRITKK-----TDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVN 588
+ +PEF+ + + D+WS+GV+ +++G P FL K+
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQ---------- 224
Query: 589 SVLANGDNRTEVFDKEM 605
LAN + + FD+E
Sbjct: 225 ETLANITSVSYDFDEEF 241
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 39/220 (17%)
Query: 377 LGSGCFGSSYKASL--------STGAMMVVKRFKQ------MNNVGREEFQEHMRRLGRL 422
LG GCFG A + VK K ++++ E E M+ +G+
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE--MEMMKMIGK- 91
Query: 423 RHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALG-----------QPSLDWPS 471
H N++ L+ + ++ E+ K +L L + G + + +
Sbjct: 92 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 472 RLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL------IPVMN 525
+ +A+G++YL S H + + NVL+ E+ +AD+GL I
Sbjct: 151 LVSCTYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 206
Query: 526 QESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + L + + +PE L T ++DVWS GVL+ EI T
Sbjct: 207 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 39/220 (17%)
Query: 377 LGSGCFGSSYKASL--------STGAMMVVKRFKQ------MNNVGREEFQEHMRRLGRL 422
LG GCFG A + VK K ++++ E E M+ +G+
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE--MEMMKMIGK- 88
Query: 423 RHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALG-----------QPSLDWPS 471
H N++ L+ + ++ E+ K +L L + G + + +
Sbjct: 89 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 472 RLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL------IPVMN 525
+ +A+G++YL S H + + NVL+ E+ +AD+GL I
Sbjct: 148 LVSCTYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 203
Query: 526 QESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + L + + +PE L T ++DVWS GVL+ EI T
Sbjct: 204 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 21/204 (10%)
Query: 376 ILGSGCFGSSYKA----SLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+LG G FG K + A+ V+ + N +E + L +L HPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILRE-VELLKKLDHPNIMKLF 87
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
+V E L + + + +I+K V G+ Y+++
Sbjct: 88 EILEDSSSFYIVGELYTGGELF-----DEIIKRKRFSEHDAARIIKQVFSGITYMHKH-- 140
Query: 492 SLIAPHGHIKSSNVLLN---ESLEPVLADYGLIPVMNQESAQELMIA---YKSPEFLQLG 545
+++ H +K N+LL + + + D+GL Q + + I Y +PE L+ G
Sbjct: 141 NIV--HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR-G 197
Query: 546 RITKKTDVWSLGVLILEIMTGKFP 569
+K DVWS GV++ +++G P
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPP 221
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 92/214 (42%), Gaps = 34/214 (15%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHM-----------RRLGR 421
AEI G G +G +KA L G RF + V + +E M R L
Sbjct: 17 AEI-GEGAYGKVFKARDLKNGG-----RFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 422 LRHPNLLPL-----VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIV 476
HPN++ L V+ R+ + LV E V + L L + +P + + ++
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL---DKVPEPGVPTETIKDMM 126
Query: 477 KGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA- 535
+ +GL +L+ S H +K N+L+ S + LAD+GL + + + A ++
Sbjct: 127 FQLLRGLDFLH----SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVT 182
Query: 536 --YKSPEFLQLGRITKKTDVWSLGVLILEIMTGK 567
Y++PE L D+WS+G + E+ K
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 39/220 (17%)
Query: 377 LGSGCFGSSYKASL--------STGAMMVVKRFKQ------MNNVGREEFQEHMRRLGRL 422
LG GCFG A + VK K ++++ E E M+ +G+
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE--MEMMKMIGK- 86
Query: 423 RHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALG-----------QPSLDWPS 471
H N++ L+ + ++ E+ K +L L + G + + +
Sbjct: 87 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 472 RLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL------IPVMN 525
+ +A+G++YL S H + + NVL+ E+ +AD+GL I
Sbjct: 146 LVSCTYQLARGMEYL----ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYK 201
Query: 526 QESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + L + + +PE L T ++DVWS GVL+ EI T
Sbjct: 202 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 29/212 (13%)
Query: 374 AEILGSGCFGSSYKASLS-TGAMMVVK-----RFKQMNNVGREEFQEHMRRLGRLRHPNL 427
+ LG G FG TG + VK + + ++ VG+ + ++ L RHP++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK--IKREIQNLKLFRHPHI 73
Query: 428 LPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ L + +V E+V L + H + + +R ++ + + + Y +
Sbjct: 74 IKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEE----MEAR-RLFQQILSAVDYCH 128
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM------IAYKSPEF 541
R + H +K NVLL+ + +AD+GL N S E + Y +PE
Sbjct: 129 RHM----VVHRDLKPENVLLDAHMNAKIADFGL---SNMMSDGEFLRDSCGSPNYAAPEV 181
Query: 542 LQLGRITK--KTDVWSLGVLILEIMTGKFPAN 571
+ GR+ + D+WS GV++ ++ G P +
Sbjct: 182 IS-GRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 89/210 (42%), Gaps = 22/210 (10%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVK----RFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
+G G F + YK L T + V + +++ R+ F+E L L+HPN++
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 433 YYYR----KEEKLLVHEFVPKRSLAVNLHGHQALGQPSL-DWPSRLKIVKGVAKGLQYLY 487
+ K+ +LV E +L L + L W + + KGLQ+L+
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSW------CRQILKGLQFLH 146
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPV-LADYGLIPVMNQESAQELMIA--YKSPEFLQL 544
P +I H +K N+ + V + D GL + A+ ++ + +PE +
Sbjct: 147 TRTPPII--HRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFXAPEXYE- 203
Query: 545 GRITKKTDVWSLGVLILEIMTGKFPANFLQ 574
+ + DV++ G LE T ++P + Q
Sbjct: 204 EKYDESVDVYAFGXCXLEXATSEYPYSECQ 233
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 16/200 (8%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKRF--KQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
+G G F A + TG + VK Q+N+ ++ +R L HPN++ L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
++ LV E+ + L H + +R K + + +QY +++
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKE----ARAKF-RQIVSAVQYCHQKF--- 133
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGL---IPVMNQESAQELMIAYKSPEFLQLGRIT-K 549
H +K+ N+LL+ +AD+G N+ A Y +PE Q +
Sbjct: 134 -IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 550 KTDVWSLGVLILEIMTGKFP 569
+ DVWSLGV++ +++G P
Sbjct: 193 EVDVWSLGVILYTLVSGSLP 212
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 27/232 (11%)
Query: 377 LGSGCFGSSYK-ASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYY 435
+G G +GS K +G +M VKR + + V +E ++ + L + + P + +Y
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIR--STVDEKEQKQLLMDLDVVMRSSDCPYIVQFY 87
Query: 436 ----RKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRL--KIVKGVAKGLQYLYRE 489
R+ + + E + + + L P + KI K L +L
Sbjct: 88 GALFREGDCWICMELMSTSFDKFYKYVYSVLDDVI---PEEILGKITLATVKALNHLKEN 144
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA---YKSPEFLQLGR 546
L + H IK SN+LL+ S L D+G+ + A+ Y +PE +
Sbjct: 145 LKII---HRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSA 201
Query: 547 ITK----KTDVWSLGVLILEIMTGKFP-----ANFLQQGKKADGDLASWVNS 589
+ ++DVWSLG+ + E+ TG+FP + F Q + GD NS
Sbjct: 202 SRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNS 253
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 94/221 (42%), Gaps = 38/221 (17%)
Query: 375 EILGSGCFGSSYKASLSTG-AMMVVKRFKQMN-NVGREEFQEHMRRLGRLRHPNLLPLVA 432
+ LG G FG ++A +KR + N + RE+ ++ L +L HP ++
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFN 70
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSL-DWPS------------RLKIVKGV 479
+ K + PK L + + Q + +L DW + L I +
Sbjct: 71 AWLEKNTTEKLQPSSPKVYLYIQM---QLCRKENLKDWMNGRCTIEERERSVCLHIFLQI 127
Query: 480 AKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA---- 535
A+ +++L+ + L+ H +K SN+ + D+GL+ M+Q+ ++ ++
Sbjct: 128 AEAVEFLHSK--GLM--HRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 536 ------------YKSPEFLQLGRITKKTDVWSLGVLILEIM 564
Y SPE + + K D++SLG+++ E++
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 12/106 (11%)
Query: 474 KIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM 533
KI + K L++L+ +L + H +K SNVL+N + D+G+ + + A+++
Sbjct: 140 KIAVSIVKALEHLHSKLSVI---HRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID 196
Query: 534 IAYK--------SPEFLQLGRITKKTDVWSLGVLILEIMTGKFPAN 571
K +PE Q G + K+D+WSLG+ +E+ +FP +
Sbjct: 197 AGCKPYXAPERINPELNQKGY-SVKSDIWSLGITXIELAILRFPYD 241
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 48/220 (21%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 87
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 130
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D GL + E +
Sbjct: 131 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR 186
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 87/200 (43%), Gaps = 16/200 (8%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKRF--KQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
+G G F A + TG + V+ Q+N+ ++ +R + L HPN++ L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
++ LV E+ + L H + + +R K + + +QY +++
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE----ARAKF-RQIVSAVQYCHQKF--- 133
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA---YKSPEFLQLGRIT-K 549
H +K+ N+LL+ + +AD+G + + Y +PE Q +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGP 192
Query: 550 KTDVWSLGVLILEIMTGKFP 569
+ DVWSLGV++ +++G P
Sbjct: 193 EVDVWSLGVILYTLVSGSLP 212
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 33/211 (15%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHM-----------RRLGRLRH 424
+G G +G +KA L G RF + V + +E M R L H
Sbjct: 19 IGEGAYGKVFKARDLKNGG-----RFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 425 PNLLPL-----VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGV 479
PN++ L V+ R+ + LV E V + L L + +P + + ++ +
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL---DKVPEPGVPTETIKDMMFQL 129
Query: 480 AKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA---Y 536
+GL +L+ S H +K N+L+ S + LAD+GL + + + A ++ Y
Sbjct: 130 LRGLDFLH----SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWY 185
Query: 537 KSPEFLQLGRITKKTDVWSLGVLILEIMTGK 567
++PE L D+WS+G + E+ K
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 94/226 (41%), Gaps = 23/226 (10%)
Query: 374 AEILGSGCFGSSYKASLS----TGAMMVVKRFKQMNNVGRE--EFQEHMRRLGRLRHPNL 427
+ILG G FGS + +L T + VK K N+ RE EF + HPN+
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 428 LPLVAYYYRKEEK-----LLVHEFVPKRSLAVNL-HGHQALGQPSLDWPSRLKIVKGVAK 481
+ L+ + +++ F+ L L + G + + LK + +A
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL 158
Query: 482 GLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM------NQESAQELMIA 535
G++YL H + + N +L + + +AD+GL + Q ++ +
Sbjct: 159 GMEYLSNR----NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK 214
Query: 536 YKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKAD 580
+ + E L T K+DVW+ GV + EI T G P +Q + D
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYD 260
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 28/208 (13%)
Query: 376 ILGSGCFGSSYKASLS-TGAMMVVKRFK-----QMNNVGREEFQEHMRRLGRLRHPNLLP 429
+LG G FG A + TG + VK K Q ++V ++ + L R HP L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR-NHPFLTQ 88
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVA----KGLQY 485
L + + V EFV L ++ + + + + +I+ + KG+
Sbjct: 89 LFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAA-EIISALMFLHDKGI-- 145
Query: 486 LYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIP--VMNQESAQELMIA--YKSPEF 541
+YR+L K NVLL+ LAD+G+ + N + Y +PE
Sbjct: 146 IYRDL----------KLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEI 195
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGKFP 569
LQ D W++GVL+ E++ G P
Sbjct: 196 LQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 377 LGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYY 435
+G G G A++ S+G ++ VK+ RE + + +H N++ + Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 436 RKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIA 495
+E +V EF+ +L ++ H + + + + V + L L+ + +I
Sbjct: 219 VGDELWVVMEFLEGGALT-DIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQ--GVI- 269
Query: 496 PHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRITKKT 551
H IKS ++LL L+D+G +++E + + + +PE + +
Sbjct: 270 -HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 552 DVWSLGVLILEIMTGKFP 569
D+WSLG++++E++ G+ P
Sbjct: 329 DIWSLGIMVIEMVDGEPP 346
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 39/220 (17%)
Query: 377 LGSGCFGSSYKASL--------STGAMMVVKRFKQ------MNNVGREEFQEHMRRLGRL 422
LG GCFG A + VK K ++++ E E M+ +G+
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE--MEMMKMIGK- 145
Query: 423 RHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALG-----------QPSLDWPS 471
H N++ L+ + ++ E+ K +L L + G + + +
Sbjct: 146 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 472 RLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL------IPVMN 525
+ +A+G++YL S H + + NVL+ E+ +AD+GL I
Sbjct: 205 LVSCTYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 260
Query: 526 QESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + L + + +PE L T ++DVWS GVL+ EI T
Sbjct: 261 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 377 LGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYY 435
+G G G A+ TG + VK+ RE + + H N++ + + Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 436 RKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIA 495
+E +V EF+ +L ++ H + + + + V + L YL+ + +I
Sbjct: 113 VGDELWVVMEFLEGGALT-DIVTHTRMNEEQIA-----TVCLSVLRALSYLHNQ--GVI- 163
Query: 496 PHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRITKKT 551
H IKS ++LL L+D+G +++E + + + +PE + +
Sbjct: 164 -HRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 552 DVWSLGVLILEIMTGKFP 569
D+WSLG++++E++ G+ P
Sbjct: 223 DIWSLGIMVIEMIDGEPP 240
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 98/243 (40%), Gaps = 35/243 (14%)
Query: 363 RFDLHDLLRASAEILGSGCFGSSYKASLSTGA-------MMVVKRFKQMNNVGREEFQEH 415
R + +LLR +LG G +G ++ TGA M V+K+ + N +
Sbjct: 15 RPECFELLR----VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKA 70
Query: 416 MRR-LGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQ-PSLDWPSRL 473
R L ++HP ++ L+ + + L+ E++ L + L + + + + +
Sbjct: 71 ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEI 130
Query: 474 KIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM 533
+ G +YR+L K N++LN L D+GL +ES +
Sbjct: 131 SMALGHLHQKGIIYRDL----------KPENIMLNHQGHVKLTDFGLC----KESIHDGT 176
Query: 534 --------IAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLAS 585
I Y +PE L + D WSLG L+ +++TG P + K D L
Sbjct: 177 VTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC 236
Query: 586 WVN 588
+N
Sbjct: 237 KLN 239
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 98/243 (40%), Gaps = 35/243 (14%)
Query: 363 RFDLHDLLRASAEILGSGCFGSSYKASLSTGA-------MMVVKRFKQMNNVGREEFQEH 415
R + +LLR +LG G +G ++ TGA M V+K+ + N +
Sbjct: 15 RPECFELLR----VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKA 70
Query: 416 MRR-LGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQ-PSLDWPSRL 473
R L ++HP ++ L+ + + L+ E++ L + L + + + + +
Sbjct: 71 ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEI 130
Query: 474 KIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM 533
+ G +YR+L K N++LN L D+GL +ES +
Sbjct: 131 SMALGHLHQKGIIYRDL----------KPENIMLNHQGHVKLTDFGLC----KESIHDGT 176
Query: 534 --------IAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLAS 585
I Y +PE L + D WSLG L+ +++TG P + K D L
Sbjct: 177 VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC 236
Query: 586 WVN 588
+N
Sbjct: 237 KLN 239
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 377 LGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYY 435
+G G G A++ S+G ++ VK+ RE + + +H N++ + Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 436 RKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIA 495
+E +V EF+ +L ++ H + + + + V + L L+ + +I
Sbjct: 99 VGDELWVVMEFLEGGALT-DIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ--GVI- 149
Query: 496 PHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRITKKT 551
H IKS ++LL L+D+G +++E + + + +PE + +
Sbjct: 150 -HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 552 DVWSLGVLILEIMTGKFP 569
D+WSLG++++E++ G+ P
Sbjct: 209 DIWSLGIMVIEMVDGEPP 226
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 48/218 (22%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 87
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 130
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + D+ L + E +
Sbjct: 131 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR 186
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FP 569
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 377 LGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYY 435
+G G G A++ S+G ++ VK+ RE + + +H N++ + Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 436 RKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIA 495
+E +V EF+ +L ++ H + + + + V + L L+ + +I
Sbjct: 88 VGDELWVVMEFLEGGALT-DIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ--GVI- 138
Query: 496 PHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRITKKT 551
H IKS ++LL L+D+G +++E + + + +PE + +
Sbjct: 139 -HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 552 DVWSLGVLILEIMTGKFP 569
D+WSLG++++E++ G+ P
Sbjct: 198 DIWSLGIMVIEMVDGEPP 215
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 16/200 (8%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKRF--KQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
+G G F A + TG + +K Q+N ++ +R + L HPN++ L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
++ L+ E+ + L H + + +R K + + +QY +++
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKE----ARSKF-RQIVSAVQYCHQKR--- 134
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGL---IPVMNQESAQELMIAYKSPEFLQLGRIT-K 549
H +K+ N+LL+ + +AD+G V + A Y +PE Q +
Sbjct: 135 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGP 193
Query: 550 KTDVWSLGVLILEIMTGKFP 569
+ DVWSLGV++ +++G P
Sbjct: 194 EVDVWSLGVILYTLVSGSLP 213
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 377 LGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYY 435
+G G G A++ S+G ++ VK+ RE + + +H N++ + Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 436 RKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIA 495
+E +V EF+ +L ++ H + + + + V + L L+ + +I
Sbjct: 97 VGDELWVVMEFLEGGALT-DIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ--GVI- 147
Query: 496 PHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRITKKT 551
H IKS ++LL L+D+G +++E + + + +PE + +
Sbjct: 148 -HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 552 DVWSLGVLILEIMTGKFP 569
D+WSLG++++E++ G+ P
Sbjct: 207 DIWSLGIMVIEMVDGEPP 224
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 96/220 (43%), Gaps = 48/220 (21%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKR----FKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+GSG +GS A TG + VK+ F+ + + R ++E +R L ++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRE-LRLLKHMKHENVIGLL 87
Query: 432 AYYYRKEEKLLVHEFVPKRSLA----VNLHGH------------QALGQPSLDWPSRLKI 475
F P RSL V L H Q L + + +
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----L 130
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA 535
+ + +GL+Y++ S H +K SN+ +NE E + +GL + E +
Sbjct: 131 IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR 186
Query: 536 -YKSPEF-LQLGRITKKTDVWSLGVLILEIMTGK--FPAN 571
Y++PE L + D+WS+G ++ E++TG+ FP
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 38/218 (17%)
Query: 372 ASAEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQE-HMRRLGRLRHPNLLPL 430
A E +G G +G ++ L G + VK F + + F+E + LRH N+L
Sbjct: 11 ALVECVGKGRYGEVWRG-LWHGESVAVKIFSSRDE--QSWFRETEIYNTVLLRHDNILGF 67
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQAL----GQPSLDWPSRLKIVKGVAKGLQYL 486
+A + + L + H H +L + +L+ L++ A GL +L
Sbjct: 68 IA------SDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHL 121
Query: 487 YREL------PSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----- 535
+ E+ P++ H KS NVL+ +L+ +AD GL VM+ + + L I
Sbjct: 122 HVEIFGTQGKPAI--AHRDFKSRNVLVKSNLQCCIADLGL-AVMHSQGSDYLDIGNNPRV 178
Query: 536 ----YKSPEFLQLGRIT------KKTDVWSLGVLILEI 563
Y +PE L T K TD+W+ G+++ EI
Sbjct: 179 GTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 377 LGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYY 435
+G G G A++ S+G ++ VK+ RE + + +H N++ + Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 436 RKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIA 495
+E +V EF+ +L ++ H + + + + V + L L+ + +I
Sbjct: 92 VGDELWVVMEFLEGGALT-DIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ--GVI- 142
Query: 496 PHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRITKKT 551
H IKS ++LL L+D+G +++E + + + +PE + +
Sbjct: 143 -HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 552 DVWSLGVLILEIMTGKFP 569
D+WSLG++++E++ G+ P
Sbjct: 202 DIWSLGIMVIEMVDGEPP 219
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 33/211 (15%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHM-----------RRLGRLRH 424
+G G +G +KA L G RF + V + +E M R L H
Sbjct: 19 IGEGAYGKVFKARDLKNGG-----RFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 425 PNLLPL-----VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGV 479
PN++ L V+ R+ + LV E V + L L + +P + + ++ +
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL---DKVPEPGVPTETIKDMMFQL 129
Query: 480 AKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA---Y 536
+GL +L+ S H +K N+L+ S + LAD+GL + + + A ++ Y
Sbjct: 130 LRGLDFLH----SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWY 185
Query: 537 KSPEFLQLGRITKKTDVWSLGVLILEIMTGK 567
++PE L D+WS+G + E+ K
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 375 EILGS-GCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRR---LGRLRHPNLLPL 430
EI+G G FG YKA +++ K ++ EE +++M L HPN++ L
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAA--KVIDTKSEEELEDYMVEIDILASCDHPNIVKL 72
Query: 431 VAYYYRKEEKLLVHEFVPKRSL-AVNLHGHQALGQPSLDWPSRLKIV-KGVAKGLQYLYR 488
+ +Y + ++ EF ++ AV L + L + S++++V K L YL+
Sbjct: 73 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTE------SQIQVVCKQTLDALNYLHD 126
Query: 489 ELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSPEFLQ----L 544
+I H +K+ N+L + LAD+G+ + Q +P ++ +
Sbjct: 127 N--KII--HRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVM 182
Query: 545 GRITK------KTDVWSLGVLILEI 563
+K K DVWSLG+ ++E+
Sbjct: 183 CETSKDRPYDYKADVWSLGITLIEM 207
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 90/224 (40%), Gaps = 25/224 (11%)
Query: 357 VRDDVERFDLHDLLRASAEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEH 415
++ +E F LH ++LG G FG + A T +K K+ + ++ +
Sbjct: 12 IKLKIEDFILH-------KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECT 64
Query: 416 M--RRLGRL--RHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPS 471
M +R+ L HP L + + KE V E++ L ++ D
Sbjct: 65 MVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH-----KFDLSR 119
Query: 472 RLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQE 531
+ GLQ+L+ S + +K N+LL++ +AD+G+ A+
Sbjct: 120 ATFYAAEIILGLQFLH----SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT 175
Query: 532 LMIA----YKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPAN 571
Y +PE L + D WS GVL+ E++ G+ P +
Sbjct: 176 NXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH 219
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 88/205 (42%), Gaps = 22/205 (10%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN-----VGREEFQEHMRRLGRLRHPNLLPL 430
+G G +G+ YKA +G + +K + N + +RRL HPN++ L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 431 --VAYYYRKEEKL---LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQY 485
V R + ++ LV E V + L L G P+ + +++ +GL +
Sbjct: 72 MDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPA---ETIKDLMRQFLRGLDF 127
Query: 486 LYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA---YKSPEFL 542
L+ H +K N+L+ LAD+GL + + + A + ++ Y++PE L
Sbjct: 128 LHAN----CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVL 183
Query: 543 QLGRITKKTDVWSLGVLILEIMTGK 567
D+WS+G + E+ K
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 363 RFDLHDLLRAS-AEILGSGCFGSSYKA-SLSTGAMMVVKR-FKQMNNV--GREEFQEHMR 417
R D H L + + LG G +G +K+ TG ++ VK+ F N + F+E M
Sbjct: 2 RVDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMI 61
Query: 418 RLGRLRHPNLLPLVAYYYRKEEK--LLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKI 475
H N++ L+ ++ LV ++ + +LH + L+ + +
Sbjct: 62 LTELSGHENIVNLLNVLRADNDRDVYLVFDY-----METDLHA--VIRANILEPVHKQYV 114
Query: 476 VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL-------------IP 522
V + K ++YL+ S H +K SN+LLN +AD+GL IP
Sbjct: 115 VYQLIKVIKYLH----SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIP 170
Query: 523 VMNQESAQEL---------MIA---YKSPEFLQLG--RITKKTDVWSLGVLILEIMTGK- 567
+ E+ + +A Y++PE L LG + TK D+WSLG ++ EI+ GK
Sbjct: 171 LSINENTENFDDDQPILTDYVATRWYRAPEIL-LGSTKYTKGIDMWSLGCILGEILCGKP 229
Query: 568 -FP 569
FP
Sbjct: 230 IFP 232
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 376 ILGSGCFGSSYKAS-LSTGAMM---VVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
LG G F Y+ + + T + VV + + +E+ + L +P+++
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGH-QALGQPSLDWPSRLKIVKGVAKGLQYLYREL 490
++ + +V E +RSL + LH +A+ +P + R I +G+QYL+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNNR 162
Query: 491 PSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGR 546
H +K N+ LN+ ++ + D+GL + + ++ + Y +PE L
Sbjct: 163 ----VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKG 218
Query: 547 ITKKTDVWSLGVLILEIMTGKFP 569
+ + D+WSLG ++ ++ GK P
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPP 241
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 377 LGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYY 435
+G G G A++ S+G ++ VK+ RE + + +H N++ + Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 436 RKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIA 495
+E +V EF+ +L ++ H + + + + V + L L+ + +I
Sbjct: 142 VGDELWVVMEFLEGGALT-DIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ--GVI- 192
Query: 496 PHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRITKKT 551
H IKS ++LL L+D+G +++E + + + +PE + +
Sbjct: 193 -HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 552 DVWSLGVLILEIMTGKFP 569
D+WSLG++++E++ G+ P
Sbjct: 252 DIWSLGIMVIEMVDGEPP 269
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 376 ILGSGCFGSSYKAS-LSTGAMM---VVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
LG G F Y+ + + T + VV + + +E+ + L +P+++
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGH-QALGQPSLDWPSRLKIVKGVAKGLQYLYREL 490
++ + +V E +RSL + LH +A+ +P + R I +G+QYL+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNNR 162
Query: 491 PSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGR 546
H +K N+ LN+ ++ + D+GL + + ++ + Y +PE L
Sbjct: 163 ----VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKG 218
Query: 547 ITKKTDVWSLGVLILEIMTGKFP 569
+ + D+WSLG ++ ++ GK P
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 102/235 (43%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLL 428
++LGSG FG+ YK + +K ++ + +E + + + +P++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L++ + +P L V H Q L+W + +AKG+ YL
Sbjct: 85 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 137
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+GL ++ E + K P +++ L
Sbjct: 138 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 193
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 194 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 240
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 102/235 (43%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLL 428
++LGSG FG+ YK + +K ++ + +E + + + +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L++ + +P L V H Q L+W + +AKG+ YL
Sbjct: 84 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 136
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+GL ++ E + K P +++ L
Sbjct: 137 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 239
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 94/238 (39%), Gaps = 37/238 (15%)
Query: 355 SFVRDDVERFDLHDLLRASAEI---LGSGCFGSSYKASLSTGAMMVVK-------RFKQM 404
SF DV D ++ R + LG G FG Y+ A VVK K +
Sbjct: 2 SFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGV----AKGVVKDEPETRVAIKTV 57
Query: 405 NNVG----REEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK-------RSLA 453
N R EF + +++ L+ + + L++ E + + RSL
Sbjct: 58 NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 117
Query: 454 VNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEP 513
+ + L PSL +++ +A G+ YL H + + N ++ E
Sbjct: 118 PEMENNPVLAPPSLS--KMIQMAGEIADGMAYLNANK----FVHRDLAARNCMVAEDFTV 171
Query: 514 VLADYGLIPVMNQESAQE------LMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ D+G+ + + L + + SPE L+ G T +DVWS GV++ EI T
Sbjct: 172 KIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 102/235 (43%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLL 428
++LGSG FG+ YK + +K ++ + +E + + + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L++ + +P L V H Q L+W + +AKG+ YL
Sbjct: 83 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 135
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+GL ++ E + K P +++ L
Sbjct: 136 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 238
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLL 428
++LGSG FG+ YK + +K ++ + +E + + + +P++
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L+ + +P L V H Q L+W + +AKG+ YL
Sbjct: 106 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 158
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+GL ++ E + K P +++ L
Sbjct: 159 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 214
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 215 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 261
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 34/213 (15%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVK-------RFKQMNNVG----REEFQEHMRRLGRLRHP 425
LG G FG Y+ A VVK K +N R EF +
Sbjct: 18 LGQGSFGMVYEGV----AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 73
Query: 426 NLLPLVAYYYRKEEKLLVHEFVPK-------RSLAVNLHGHQALGQPSLDWPSRLKIVKG 478
+++ L+ + + L++ E + + RSL + + L PSL +++
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAGE 131
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQE------L 532
+A G+ YL H + + N ++ E + D+G+ + + L
Sbjct: 132 IADGMAYLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLL 187
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + SPE L+ G T +DVWS GV++ EI T
Sbjct: 188 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 376 ILGSGCFGSSYKAS-LSTGAMM---VVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
LG G F Y+ + + T + VV + + +E+ + L +P+++
Sbjct: 33 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 92
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGH-QALGQPSLDWPSRLKIVKGVAKGLQYLYREL 490
++ + +V E +RSL + LH +A+ +P + R I +G+QYL+
Sbjct: 93 GFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNNR 146
Query: 491 PSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGR 546
H +K N+ LN+ ++ + D+GL + + ++ + Y +PE L
Sbjct: 147 ----VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKG 202
Query: 547 ITKKTDVWSLGVLILEIMTGKFP 569
+ + D+WSLG ++ ++ GK P
Sbjct: 203 HSFEVDIWSLGCILYTLLVGKPP 225
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 102/235 (43%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLL 428
++LGSG FG+ YK + +K ++ + +E + + + +P++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L++ + +P L V H Q L+W + +AKG+ YL
Sbjct: 82 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 134
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+GL ++ E + K P +++ L
Sbjct: 135 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 190
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 191 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 237
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL------IPVMNQESAQEL 532
VA+G++YL S H + + NVL+ E +AD+GL I + + L
Sbjct: 148 VARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 203
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE L T ++DVWS GVL+ EI T
Sbjct: 204 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 102/235 (43%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLL 428
++LGSG FG+ YK + +K ++ + +E + + + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L++ + +P L V H Q L+W + +AKG+ YL
Sbjct: 81 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 133
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+GL ++ E + K P +++ L
Sbjct: 134 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 236
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLL 428
++LGSG FG+ YK + +K ++ + +E + + + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L+ + +P L V H Q L+W + +AKG+ YL
Sbjct: 83 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 135
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+GL ++ E + K P +++ L
Sbjct: 136 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 238
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA--- 535
+ +GL+Y++ S H +K SN+LLN + + + D+GL V + + +
Sbjct: 141 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 196
Query: 536 ----YKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGK--FPA-NFLQQGKKADGDLAS 585
Y++PE + + TK D+WS+G ++ E+++ + FP ++L Q G L S
Sbjct: 197 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 254
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA--- 535
+ +GL+Y++ S H +K SN+LLN + + + D+GL V + + +
Sbjct: 133 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 536 ----YKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGK--FPA-NFLQQGKKADGDLAS 585
Y++PE + + TK D+WS+G ++ E+++ + FP ++L Q G L S
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 246
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA--- 535
+ +GL+Y++ S H +K SN+LLN + + + D+GL V + + +
Sbjct: 137 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 536 ----YKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGK--FPA-NFLQQGKKADGDLAS 585
Y++PE + + TK D+WS+G ++ E+++ + FP ++L Q G L S
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 250
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL------IPVMNQESAQEL 532
VA+G++YL S H + + NVL+ E +AD+GL I + + L
Sbjct: 151 VARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 206
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE L T ++DVWS GVL+ EI T
Sbjct: 207 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA--- 535
+ +GL+Y++ S H +K SN+LLN + + + D+GL V + + +
Sbjct: 137 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 536 ----YKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGK--FPA-NFLQQGKKADGDLAS 585
Y++PE + + TK D+WS+G ++ E+++ + FP ++L Q G L S
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 250
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLL 428
++LGSG FG+ YK + +K ++ + +E + + + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L+ + +P L V H Q L+W + +AKG+ YL
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 133
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+GL ++ E + K P +++ L
Sbjct: 134 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 236
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLL 428
++LGSG FG+ YK + +K ++ + +E + + + +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L+ + +P L V H Q L+W + +AKG+ YL
Sbjct: 84 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 136
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+GL ++ E + K P +++ L
Sbjct: 137 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 239
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 18/204 (8%)
Query: 375 EILGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPL 430
++LG G FG +TG +K K+ V ++E + R L RHP L L
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 213
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKG-VAKGLQYLYRE 489
+ + V E+ L +L + + R + + L YL+ E
Sbjct: 214 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSE------DRARFYGAEIVSALDYLHSE 267
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLG 545
+ + +K N++L++ + D+GL ++ A Y +PE L+
Sbjct: 268 KNVV---YRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDN 324
Query: 546 RITKKTDVWSLGVLILEIMTGKFP 569
+ D W LGV++ E+M G+ P
Sbjct: 325 DYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 29/172 (16%)
Query: 414 EHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDW---P 470
E M+ +G+ H N++ L+ + ++ E+ K +L L QA P L++ P
Sbjct: 126 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL---QARRPPGLEYSYNP 180
Query: 471 SR-----------LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYG 519
S + VA+G++YL S H + + NVL+ E +AD+G
Sbjct: 181 SHNPEEQLSSKDLVSCAYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFG 236
Query: 520 L------IPVMNQESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
L I + + L + + +PE L T ++DVWS GVL+ EI T
Sbjct: 237 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA--- 535
+ +GL+Y++ S H +K SN+LLN + + + D+GL V + + +
Sbjct: 131 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 536 ----YKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGK--FPA-NFLQQGKKADGDLAS 585
Y++PE + + TK D+WS+G ++ E+++ + FP ++L Q G L S
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 244
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL------IPVMNQESAQEL 532
VA+G++YL S H + + NVL+ E +AD+GL I + + L
Sbjct: 144 VARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 199
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE L T ++DVWS GVL+ EI T
Sbjct: 200 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 18/204 (8%)
Query: 375 EILGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPL 430
++LG G FG +TG +K K+ V ++E + R L RHP L L
Sbjct: 157 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 216
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKG-VAKGLQYLYRE 489
+ + V E+ L +L + + R + + L YL+ E
Sbjct: 217 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSE------DRARFYGAEIVSALDYLHSE 270
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLG 545
+ + +K N++L++ + D+GL ++ A Y +PE L+
Sbjct: 271 KNVV---YRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDN 327
Query: 546 RITKKTDVWSLGVLILEIMTGKFP 569
+ D W LGV++ E+M G+ P
Sbjct: 328 DYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 21/204 (10%)
Query: 376 ILGSGCFGSSYKA----SLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+LG G FG K + A+ V+ + N +E + L +L HPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILRE-VELLKKLDHPNIMKLF 87
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
+V E L + + + +I+K V G+ Y+++
Sbjct: 88 EILEDSSSFYIVGELYTGGELF-----DEIIKRKRFSEHDAARIIKQVFSGITYMHKH-- 140
Query: 492 SLIAPHGHIKSSNVLLN---ESLEPVLADYGLIPVMNQESAQELMIA---YKSPEFLQLG 545
+++ H +K N+LL + + + D+GL Q + + I Y +PE L+ G
Sbjct: 141 NIV--HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR-G 197
Query: 546 RITKKTDVWSLGVLILEIMTGKFP 569
+K DVWS GV++ +++G P
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPP 221
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA--- 535
+ +GL+Y++ S H +K SN+LLN + + + D+GL V + + +
Sbjct: 153 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 536 ----YKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGK--FPA-NFLQQGKKADGDLAS 585
Y++PE + + TK D+WS+G ++ E+++ + FP ++L Q G L S
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 266
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLL 428
++LGSG FG+ YK + +K ++ + +E + + + +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L+ + +P L V H Q L+W + +AKG+ YL
Sbjct: 84 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 136
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+GL ++ E + K P +++ L
Sbjct: 137 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 239
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLL 428
++LGSG FG+ YK + +K ++ + +E + + + +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L+ + +P L V H Q L+W + +AKG+ YL
Sbjct: 84 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 136
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+GL ++ E + K P +++ L
Sbjct: 137 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 239
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL------IPVMNQESAQEL 532
VA+G++YL S H + + NVL+ E +AD+GL I + + L
Sbjct: 159 VARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 214
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE L T ++DVWS GVL+ EI T
Sbjct: 215 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA--- 535
+ +GL+Y++ S H +K SN+LLN + + + D+GL V + + +
Sbjct: 135 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 536 ----YKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGK--FPA-NFLQQGKKADGDLAS 585
Y++PE + + TK D+WS+G ++ E+++ + FP ++L Q G L S
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 248
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA--- 535
+ +GL+Y++ S H +K SN+LLN + + + D+GL V + + +
Sbjct: 138 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 193
Query: 536 ----YKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGK--FPA-NFLQQGKKADGDLAS 585
Y++PE + + TK D+WS+G ++ E+++ + FP ++L Q G L S
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 251
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 21/204 (10%)
Query: 376 ILGSGCFGSSYKA----SLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+LG G FG K + A+ V+ + N +E + L +L HPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILRE-VELLKKLDHPNIMKLF 87
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
+V E L + + + +I+K V G+ Y+++
Sbjct: 88 EILEDSSSFYIVGELYTGGELF-----DEIIKRKRFSEHDAARIIKQVFSGITYMHKH-- 140
Query: 492 SLIAPHGHIKSSNVLLN---ESLEPVLADYGLIPVMNQESAQELMIA---YKSPEFLQLG 545
+++ H +K N+LL + + + D+GL Q + + I Y +PE L+ G
Sbjct: 141 NIV--HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR-G 197
Query: 546 RITKKTDVWSLGVLILEIMTGKFP 569
+K DVWS GV++ +++G P
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPP 221
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA--- 535
+ +GL+Y++ S H +K SN+LLN + + + D+GL V + + +
Sbjct: 139 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 194
Query: 536 ----YKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGK--FPA-NFLQQGKKADGDLAS 585
Y++PE + + TK D+WS+G ++ E+++ + FP ++L Q G L S
Sbjct: 195 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 252
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA--- 535
+ +GL+Y++ S H +K SN+LLN + + + D+GL V + + +
Sbjct: 130 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 185
Query: 536 ----YKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGK--FPA-NFLQQGKKADGDLAS 585
Y++PE + + TK D+WS+G ++ E+++ + FP ++L Q G L S
Sbjct: 186 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 243
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA--- 535
+ +GL+Y++ S H +K SN+LLN + + + D+GL V + + +
Sbjct: 137 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 536 ----YKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGK--FPA-NFLQQGKKADGDLAS 585
Y++PE + + TK D+WS+G ++ E+++ + FP ++L Q G L S
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 250
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLL 428
++LGSG FG+ YK + +K ++ + +E + + + +P++
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L+ + +P L V H Q L+W + +AKG+ YL
Sbjct: 87 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 139
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+GL ++ E + K P +++ L
Sbjct: 140 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 195
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 196 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 242
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLL 428
++LGSG FG+ YK + +K ++ + +E + + + +P++
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L+ + +P L V H Q L+W + +AKG+ YL
Sbjct: 91 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 143
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+GL ++ E + K P +++ L
Sbjct: 144 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 199
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 200 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 246
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLL 428
++LGSG FG+ YK + +K ++ + +E + + + +P++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L+ + +P L V H Q L+W + +AKG+ YL
Sbjct: 88 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 140
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+GL ++ E + K P +++ L
Sbjct: 141 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 243
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 29/172 (16%)
Query: 414 EHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDW---P 470
E M+ +G+ H N++ L+ + ++ E+ K +L L QA P L++ P
Sbjct: 85 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL---QAREPPGLEYSYNP 139
Query: 471 SR-----------LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYG 519
S + VA+G++YL S H + + NVL+ E +AD+G
Sbjct: 140 SHNPEEQLSSKDLVSCAYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFG 195
Query: 520 L------IPVMNQESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
L I + + L + + +PE L T ++DVWS GVL+ EI T
Sbjct: 196 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 102/235 (43%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLL 428
++LGSG FG+ YK + +K ++ + +E + + + +P++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L++ + +P L V H Q L+W + +AKG+ YL
Sbjct: 82 RLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 134
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+GL ++ E + K P +++ L
Sbjct: 135 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 190
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 191 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 237
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA--- 535
+ +GL+Y++ S H +K SN+LLN + + + D+GL V + + +
Sbjct: 131 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 536 ----YKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGK--FPA-NFLQQGKKADGDLAS 585
Y++PE + + TK D+WS+G ++ E+++ + FP ++L Q G L S
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 244
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL------IPVMNQESAQEL 532
VA+G++YL S H + + NVL+ E +AD+GL I + + L
Sbjct: 152 VARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 207
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE L T ++DVWS GVL+ EI T
Sbjct: 208 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA--- 535
+ +GL+Y++ S H +K SN+LLN + + + D+GL V + + +
Sbjct: 133 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 536 ----YKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGK--FPA-NFLQQGKKADGDLAS 585
Y++PE + + TK D+WS+G ++ E+++ + FP ++L Q G L S
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 246
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLL 428
++LGSG FG+ YK + +K ++ + +E + + + +P++
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L+ + +P L V H Q L+W + +AKG+ YL
Sbjct: 75 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 127
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+GL ++ E + K P +++ L
Sbjct: 128 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 183
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 184 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 230
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL------IPVMNQESAQEL 532
VA+G++YL S H + + NVL+ E +AD+GL I + + L
Sbjct: 159 VARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 214
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE L T ++DVWS GVL+ EI T
Sbjct: 215 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 100/247 (40%), Gaps = 29/247 (11%)
Query: 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
AE LG G FG ++ ++ + +F ++ + ++ + L RH N+L L
Sbjct: 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHES 69
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSR--LKIVKGVAKGLQYLYRELP 491
+ EE +++ EF+ L + + + + R + V V + LQ+L+
Sbjct: 70 FESMEELVMIFEFIS------GLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---- 119
Query: 492 SLIAPHGHIKSSNVLLN--ESLEPVLADYGLIPVMNQESAQELMIA---YKSPEFLQLGR 546
S H I+ N++ S + ++G + L+ Y +PE Q
Sbjct: 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDV 179
Query: 547 ITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMA 606
++ TD+WSLG L+ +++G P LA ++ N N FD+E
Sbjct: 180 VSTATDMWSLGTLVYVLLSGINPF------------LAETNQQIIENIMNAEYTFDEEAF 227
Query: 607 DERNSEG 613
E + E
Sbjct: 228 KEISIEA 234
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLL 428
++LGSG FG+ YK + +K ++ + +E + + + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L+ + +P L V H Q L+W + +AKG+ YL
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 133
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+GL ++ E + K P +++ L
Sbjct: 134 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 236
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL------IPVMNQESAQEL 532
VA+G++YL S H + + NVL+ E +AD+GL I + + L
Sbjct: 159 VARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRL 214
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE L T ++DVWS GVL+ EI T
Sbjct: 215 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 85/200 (42%), Gaps = 16/200 (8%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKRF--KQMNNVGREEFQEHMRRLGRLRHPNLLPLVAY 433
+G G F A + TG + +K Q+N ++ +R + L HPN++ L
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSL 493
++ L+ E+ + L H + + +R K + + +QY +++
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKE----ARSKF-RQIVSAVQYCHQKR--- 131
Query: 494 IAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA---YKSPEFLQLGRIT-K 549
H +K+ N+LL+ + +AD+G + Y +PE Q +
Sbjct: 132 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGP 190
Query: 550 KTDVWSLGVLILEIMTGKFP 569
+ DVWSLGV++ +++G P
Sbjct: 191 EVDVWSLGVILYTLVSGSLP 210
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA--- 535
+ +GL+Y++ S H +K SN+LLN + + + D+GL V + + +
Sbjct: 135 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 536 ----YKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGK--FPA-NFLQQGKKADGDLAS 585
Y++PE + + TK D+WS+G ++ E+++ + FP ++L Q G L S
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 248
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA--- 535
+ +GL+Y++ S H +K SN+L+N + + + D+GL + + E +
Sbjct: 153 ILRGLKYIH----SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXV 208
Query: 536 ----YKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGK--FPA-NFLQQGKKADGDLAS 585
Y++PE + + TK D+WS+G ++ E+++ + FP ++L Q G L S
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 266
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 23/169 (13%)
Query: 414 EHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALG---------- 463
E M+ +G+ H N++ L+ + ++ E+ K +L L + G
Sbjct: 92 EMMKMIGK--HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 464 -QPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL-- 520
+ + + + +A+G++YL S H + + NVL+ E+ +AD+GL
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 521 ----IPVMNQESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
I + + L + + +PE L T ++DVWS GVL+ EI T
Sbjct: 206 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA--- 535
+ +GL+Y++ S H +K SN+LLN + + + D+GL V + + +
Sbjct: 137 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 192
Query: 536 ----YKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGK--FPA-NFLQQGKKADGDLAS 585
Y++PE + + TK D+WS+G ++ E+++ + FP ++L Q G L S
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 250
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 18/204 (8%)
Query: 375 EILGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPL 430
++LG G FG +TG +K K+ V ++E + R L RHP L L
Sbjct: 16 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 75
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKG-VAKGLQYLYRE 489
+ + V E+ L +L + + R + + L YL+ E
Sbjct: 76 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSE------DRARFYGAEIVSALDYLHSE 129
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLG 545
+ + +K N++L++ + D+GL ++ A Y +PE L+
Sbjct: 130 KNVV---YRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDN 186
Query: 546 RITKKTDVWSLGVLILEIMTGKFP 569
+ D W LGV++ E+M G+ P
Sbjct: 187 DYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA--- 535
+ +GL+Y++ S H +K SN+LLN + + + D+GL V + + +
Sbjct: 138 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 193
Query: 536 ----YKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGK--FPA-NFLQQGKKADGDLAS 585
Y++PE + + TK D+WS+G ++ E+++ + FP ++L Q G L S
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 251
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 21/131 (16%)
Query: 467 LDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQ 526
L + L VAKG+++L E S + H + + NVL+ + D+GL +
Sbjct: 169 LTFEDLLCFAYQVAKGMEFL--EFKSCV--HRDLAARNVLVTHGKVVKICDFGLARDIMS 224
Query: 527 ESAQ------ELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT---GKFP-----ANF 572
+S L + + +PE L G T K+DVWS G+L+ EI + +P ANF
Sbjct: 225 DSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANF 284
Query: 573 ---LQQGKKAD 580
+Q G K D
Sbjct: 285 YKLIQNGFKMD 295
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 18/204 (8%)
Query: 375 EILGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPL 430
++LG G FG +TG +K K+ V ++E + R L RHP L L
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 74
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKG-VAKGLQYLYRE 489
+ + V E+ L +L + + R + + L YL+ E
Sbjct: 75 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSE------DRARFYGAEIVSALDYLHSE 128
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLG 545
+ + +K N++L++ + D+GL ++ A Y +PE L+
Sbjct: 129 KNVV---YRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDN 185
Query: 546 RITKKTDVWSLGVLILEIMTGKFP 569
+ D W LGV++ E+M G+ P
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLL 428
++LGSG FG+ YK + +K ++ + +E + + + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L+ + +P L V H Q L+W + +AKG+ YL
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 133
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+GL ++ E + K P +++ L
Sbjct: 134 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 236
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA--- 535
+ +GL+Y++ S H +K SN+LLN + + + D+GL V + + +
Sbjct: 153 ILRGLKYIH----SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 536 ----YKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGK--FPA-NFLQQGKKADGDLAS 585
Y++PE + + TK D+WS+G ++ E+++ + FP ++L Q G L S
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 266
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 18/204 (8%)
Query: 375 EILGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPL 430
++LG G FG +TG +K K+ V ++E + R L RHP L L
Sbjct: 14 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 73
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKG-VAKGLQYLYRE 489
+ + V E+ L +L + + R + + L YL+ E
Sbjct: 74 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSE------DRARFYGAEIVSALDYLHSE 127
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLG 545
+ + +K N++L++ + D+GL ++ A Y +PE L+
Sbjct: 128 KNVV---YRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDN 184
Query: 546 RITKKTDVWSLGVLILEIMTGKFP 569
+ D W LGV++ E+M G+ P
Sbjct: 185 DYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 88/206 (42%), Gaps = 24/206 (11%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN-----VGREEFQEHMRRLGRLRHPNLLPL 430
+G G +G+ YKA +G + +K + N + +RRL HPN++ L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 431 --VAYYYRKEEKL---LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLK-IVKGVAKGLQ 484
V R + ++ LV E V + L L G P+ +K +++ +GL
Sbjct: 72 MDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPA----ETIKDLMRQFLRGLD 126
Query: 485 YLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA---YKSPEF 541
+L+ H +K N+L+ LAD+GL + + + A ++ Y++PE
Sbjct: 127 FLHAN----CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEV 182
Query: 542 LQLGRITKKTDVWSLGVLILEIMTGK 567
L D+WS+G + E+ K
Sbjct: 183 LLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 376 ILGSGCFGSSYKAS-LSTGAMM---VVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
LG G F Y+ + + T + VV + + +E+ + L +P+++
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGH-QALGQPSLDWPSRLKIVKGVAKGLQYLYREL 490
++ + +V E +RSL + LH +A+ +P + R I +G+QYL+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNNR 162
Query: 491 PSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGR 546
H +K N+ LN+ ++ + D+GL + + ++ + Y +PE L
Sbjct: 163 ----VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKG 218
Query: 547 ITKKTDVWSLGVLILEIMTGKFP 569
+ + D+WSLG ++ ++ GK P
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPP 241
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA--- 535
+ +GL+Y++ S H +K SN+LLN + + + D+GL V + + +
Sbjct: 133 ILRGLKYIH----SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 536 ----YKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGK--FPA-NFLQQGKKADGDLAS 585
Y++PE + + TK D+WS+G ++ E+++ + FP ++L Q G L S
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 246
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA--- 535
+ +GL+Y++ S H +K SN+LLN + + + D+GL V + + +
Sbjct: 137 ILRGLKYIH----SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 536 ----YKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGK--FPA-NFLQQGKKADGDLAS 585
Y++PE + + TK D+WS+G ++ E+++ + FP ++L Q G L S
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 250
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 423 RHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKG 482
+H N++ + Y EE ++ EF+ +L + Q L+ + + V +
Sbjct: 100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALT------DIVSQVRLNEEQIATVCEAVLQA 153
Query: 483 LQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKS 538
L YL+ + +I H IKS ++LL L+D+G ++++ + + + +
Sbjct: 154 LAYLHAQ--GVI--HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMA 209
Query: 539 PEFLQLGRITKKTDVWSLGVLILEIMTGKFP 569
PE + + D+WSLG++++E++ G+ P
Sbjct: 210 PEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 412 FQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPS 471
F+ + +L H N++ ++ + LV E++ +L+ + H G S+D +
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH---GPLSVD--T 112
Query: 472 RLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQE 531
+ + G+++ + + H IK N+L++ + + D+G+ +++ S +
Sbjct: 113 AINFTNQILDGIKHAH----DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ 168
Query: 532 L-----MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPAN 571
+ Y SPE + + TD++S+G+++ E++ G+ P N
Sbjct: 169 TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA--- 535
+ +GL+Y++ S H +K SN+LLN + + + D+GL V + + +
Sbjct: 133 ILRGLKYIH----SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 536 ----YKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGK--FPA-NFLQQGKKADGDLAS 585
Y++PE + + TK D+WS+G ++ E+++ + FP ++L Q G L S
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 246
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA--- 535
+ +GL+Y++ S H +K SN+LLN + + + D+GL V + + +
Sbjct: 137 ILRGLKYIH----SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 536 ----YKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGK--FPA-NFLQQGKKADGDLAS 585
Y++PE + + TK D+WS+G ++ E+++ + FP ++L Q G L S
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 250
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 16/153 (10%)
Query: 424 HPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGL 483
HPN++ L ++ + LV E + L + + + + R K+V V+
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMR-KLVSAVS--- 120
Query: 484 QYLYRELPSLIAPHGHIKSSNVLL---NESLEPVLADYG---LIPVMNQE-SAQELMIAY 536
+ + H +K N+L N++LE + D+G L P NQ + Y
Sbjct: 121 -----HMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHY 175
Query: 537 KSPEFLQLGRITKKTDVWSLGVLILEIMTGKFP 569
+PE L + D+WSLGV++ +++G+ P
Sbjct: 176 AAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 23/169 (13%)
Query: 414 EHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALG---------- 463
E M+ +G+ H N++ L+ + ++ E+ K +L L + G
Sbjct: 92 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 464 -QPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL-- 520
+ + + + +A+G++YL S H + + NVL+ E+ +AD+GL
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 521 ----IPVMNQESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
I + + L + + +PE L T ++DVWS GVL+ EI T
Sbjct: 206 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 94/238 (39%), Gaps = 37/238 (15%)
Query: 355 SFVRDDVERFDLHDLLRASAEI---LGSGCFGSSYKASLSTGAMMVVK-------RFKQM 404
SF DV D ++ R + LG G FG Y+ A VVK K +
Sbjct: 2 SFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGV----AKGVVKDEPETRVAIKTV 57
Query: 405 NNVG----REEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK-------RSLA 453
N R EF + +++ L+ + + L++ E + + RSL
Sbjct: 58 NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 117
Query: 454 VNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEP 513
+ + L PSL +++ +A G+ YL H + + N ++ E
Sbjct: 118 PEMENNPVLAPPSLS--KMIQMAGEIADGMAYLNANK----FVHRDLAARNCMVAEDFTV 171
Query: 514 VLADYGLIPVMNQESAQE------LMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ D+G+ + + L + + SPE L+ G T +DVWS GV++ EI T
Sbjct: 172 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL------IPVMNQESAQEL 532
+A+G++YL S H + + NVL+ E+ +AD+GL I + + L
Sbjct: 166 LARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE L T ++DVWS GVL+ EI T
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 19/198 (9%)
Query: 377 LGSGCFGSSYKA---SLSTGAMMV-VKRFKQ-MNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+G G FG ++ S AM V +K K ++ RE+F + + + HP+++ L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
+ ++ E L L + + SLD S + ++ L YL E
Sbjct: 458 GVI-TENPVWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQLSTALAYL--ESK 510
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMN-----QESAQELMIAYKSPEFLQLGR 546
+ H I + NVL++ + L D+GL M + S +L I + +PE + R
Sbjct: 511 RFV--HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 568
Query: 547 ITKKTDVWSLGVLILEIM 564
T +DVW GV + EI+
Sbjct: 569 FTSASDVWMFGVCMWEIL 586
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL------IPVMNQESAQEL 532
+A+G++YL S H + + NVL+ E+ +AD+GL I + + L
Sbjct: 166 LARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE L T ++DVWS GVL+ EI T
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 23/169 (13%)
Query: 414 EHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALG---------- 463
E M+ +G+ H N++ L+ + ++ E+ K +L L + G
Sbjct: 92 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 464 -QPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL-- 520
+ + + + +A+G++YL S H + + NVL+ E+ +AD+GL
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMRIADFGLAR 205
Query: 521 ----IPVMNQESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
I + + L + + +PE L T ++DVWS GVL+ EI T
Sbjct: 206 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL------IPVMNQESAQEL 532
+A+G++YL S H + + NVL+ E+ +AD+GL I + + L
Sbjct: 166 LARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE L T ++DVWS GVL+ EI T
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPL 430
++LG G FG +TG +K ++ + ++E + R L RHP L L
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 75
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKG-VAKGLQYLYRE 489
+ + V E+ L +L + + R + + L+YL+
Sbjct: 76 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE------ERARFYGAEIVSALEYLH-- 127
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLG 545
S + IK N++L++ + D+GL + A Y +PE L+
Sbjct: 128 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 185
Query: 546 RITKKTDVWSLGVLILEIMTGKFP 569
+ D W LGV++ E+M G+ P
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 34/213 (15%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVK-------RFKQMNNVG----REEFQEHMRRLGRLRHP 425
LG G FG Y+ A VVK K +N R EF +
Sbjct: 20 LGQGSFGMVYEGV----AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 426 NLLPLVAYYYRKEEKLLVHEFVPK-------RSLAVNLHGHQALGQPSLDWPSRLKIVKG 478
+++ L+ + + L++ E + + RSL + + L PSL +++
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAGE 133
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQE------L 532
+A G+ YL H + + N ++ E + D+G+ + + L
Sbjct: 134 IADGMAYLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 189
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + SPE L+ G T +DVWS GV++ EI T
Sbjct: 190 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 94/225 (41%), Gaps = 30/225 (13%)
Query: 366 LHDLLRASAEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLR- 423
D+ + ++E+LG G + A SL G VK ++ R + L + +
Sbjct: 10 FEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQG 69
Query: 424 HPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGL 483
+ N+L L+ ++ LV E + S+ ++ + + ++V+ VA L
Sbjct: 70 NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREAS-----RVVRDVAAAL 124
Query: 484 QYLYRELPSLIAPHGHIKSSNVLLN--ESLEPV-LADYGL----------IPVMNQESAQ 530
+L+ + + H +K N+L E + PV + D+ L P+ E
Sbjct: 125 DFLHTKGIA----HRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTT 180
Query: 531 ELMIA-YKSPEFL-----QLGRITKKTDVWSLGVLILEIMTGKFP 569
A Y +PE + Q K+ D+WSLGV++ +++G P
Sbjct: 181 PCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN---VGREEFQEHMRRLGRLRHPNLLPL 430
E +G G +G+ +KA + T ++ +KR + ++ V +E + L L+H N++ L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALRE-ICLLKELKHKNIVRL 66
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYREL 490
+ ++ LV EF + +L + LD + + KGL + +
Sbjct: 67 HDVLHSDKKLTLVFEFCDQ-----DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH--- 118
Query: 491 PSLIAPHGHIKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKSPEFLQLG 545
S H +K N+L+N + E LAD+GL IPV SA+ + + Y+ P+ L
Sbjct: 119 -SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV-RCYSAEVVTLWYRPPDVLFGA 176
Query: 546 RI-TKKTDVWSLGVLILEIMTGK---FPAN 571
++ + D+WS G + E+ FP N
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAARPLFPGN 206
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 34/213 (15%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVK-------RFKQMNNVG----REEFQEHMRRLGRLRHP 425
LG G FG Y+ A VVK K +N R EF +
Sbjct: 24 LGQGSFGMVYEGV----AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 79
Query: 426 NLLPLVAYYYRKEEKLLVHEFVPK-------RSLAVNLHGHQALGQPSLDWPSRLKIVKG 478
+++ L+ + + L++ E + + RSL + + L PSL +++
Sbjct: 80 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAGE 137
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQE------L 532
+A G+ YL H + + N ++ E + D+G+ + + L
Sbjct: 138 IADGMAYLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 193
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + SPE L+ G T +DVWS GV++ EI T
Sbjct: 194 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 23/169 (13%)
Query: 414 EHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALG---------- 463
E M+ +G+ H N++ L+ + ++ E+ K +L L + G
Sbjct: 92 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 464 -QPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL-- 520
+ + + + +A+G++YL S H + + NVL+ E+ +AD+GL
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 521 ----IPVMNQESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
I + + L + + +PE L T ++DVWS GVL+ EI T
Sbjct: 206 DINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 23/169 (13%)
Query: 414 EHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALG---------- 463
E M+ +G+ H N++ L+ + ++ E+ K +L L + G
Sbjct: 92 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRV 149
Query: 464 -QPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL-- 520
+ + + + +A+G++YL S H + + NVL+ E+ +AD+GL
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 521 ----IPVMNQESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
I + + L + + +PE L T ++DVWS GVL+ EI T
Sbjct: 206 DINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 475 IVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMI 534
+V + KGL+Y++ S H +K N+ +NE E + D+GL + E ++
Sbjct: 149 LVYQMLKGLKYIH----SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVT 204
Query: 535 A-YKSPE-FLQLGRITKKTDVWSLGVLILEIMTGK 567
Y++PE L + D+WS+G ++ E++TGK
Sbjct: 205 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPL 430
++LG G FG +TG +K ++ + ++E + R L RHP L L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKG-VAKGLQYLYRE 489
+ + V E+ L +L + + R + + L+YL+
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE------ERARFYGAEIVSALEYLH-- 122
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLG 545
S + IK N++L++ + D+GL + A Y +PE L+
Sbjct: 123 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 546 RITKKTDVWSLGVLILEIMTGKFP 569
+ D W LGV++ E+M G+ P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA--- 535
+ +GL+Y++ S H +K SN+LLN + + + D+GL V + + +
Sbjct: 133 ILRGLKYIH----SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYV 188
Query: 536 ----YKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGK--FPA-NFLQQGKKADGDLAS 585
Y++PE + + TK D+WS+G ++ E+++ + FP ++L Q G L S
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 246
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 19/198 (9%)
Query: 377 LGSGCFGSSYKA---SLSTGAMMV-VKRFKQM-NNVGREEFQEHMRRLGRLRHPNLLPLV 431
+G G FG ++ S AM V +K K ++ RE+F + + + HP+++ L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
+ ++ E L L + SLD S + ++ L YL E
Sbjct: 78 GVI-TENPVWIIMELCTLGELRSFLQVRKF----SLDLASLILYAYQLSTALAYL--ESK 130
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMN-----QESAQELMIAYKSPEFLQLGR 546
+ H I + NVL++ + L D+GL M + S +L I + +PE + R
Sbjct: 131 RFV--HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 547 ITKKTDVWSLGVLILEIM 564
T +DVW GV + EI+
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 19/198 (9%)
Query: 377 LGSGCFGSSYKA---SLSTGAMMV-VKRFKQ-MNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+G G FG ++ S AM V +K K ++ RE+F + + + HP+++ L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
+ ++ E L L + + SLD S + ++ L YL E
Sbjct: 458 GVI-TENPVWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQLSTALAYL--ESK 510
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMN-----QESAQELMIAYKSPEFLQLGR 546
+ H I + NVL++ + L D+GL M + S +L I + +PE + R
Sbjct: 511 RFV--HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 568
Query: 547 ITKKTDVWSLGVLILEIM 564
T +DVW GV + EI+
Sbjct: 569 FTSASDVWMFGVCMWEIL 586
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 19/198 (9%)
Query: 377 LGSGCFGSSYKA---SLSTGAMMV-VKRFKQM-NNVGREEFQEHMRRLGRLRHPNLLPLV 431
+G G FG ++ S AM V +K K ++ RE+F + + + HP+++ L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
+ ++ E L L + SLD S + ++ L YL E
Sbjct: 78 GVI-TENPVWIIMELCTLGELRSFLQVRKF----SLDLASLILYAYQLSTALAYL--ESK 130
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMN-----QESAQELMIAYKSPEFLQLGR 546
+ H I + NVL++ + L D+GL M + S +L I + +PE + R
Sbjct: 131 RFV--HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRR 188
Query: 547 ITKKTDVWSLGVLILEIM 564
T +DVW GV + EI+
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 23/218 (10%)
Query: 364 FDLHDLLRASAEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGR- 421
FD ++LRA +G G FG + T M +K + V R E + + L
Sbjct: 14 FDHFEILRA----IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIM 69
Query: 422 --LRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGV 479
L HP L+ L + +E+ +V + + L +L + + ++ +L I + V
Sbjct: 70 QGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETV----KLFICELV 125
Query: 480 AKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA---Y 536
L YL + +I H +K N+LL+E + D+ + ++ +E+ M Y
Sbjct: 126 M-ALDYLQNQ--RII--HRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPY 180
Query: 537 KSPEFLQLGR---ITKKTDVWSLGVLILEIMTGKFPAN 571
+PE + + D WSLGV E++ G+ P +
Sbjct: 181 MAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYH 218
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 34/213 (15%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVK-------RFKQMNNVG----REEFQEHMRRLGRLRHP 425
LG G FG Y+ A VVK K +N R EF +
Sbjct: 26 LGQGSFGMVYEGV----AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 426 NLLPLVAYYYRKEEKLLVHEFVPK-------RSLAVNLHGHQALGQPSLDWPSRLKIVKG 478
+++ L+ + + L++ E + + RSL + + L PSL +++
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAGE 139
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQE------L 532
+A G+ YL H + + N ++ E + D+G+ + + L
Sbjct: 140 IADGMAYLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 195
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + SPE L+ G T +DVWS GV++ EI T
Sbjct: 196 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA--- 535
+ +GL+Y++ S H +K SN+LLN + + + D+GL V + + +
Sbjct: 135 ILRGLKYIH----SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 536 ----YKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGK--FPA-NFLQQGKKADGDLAS 585
Y++PE + + TK D+WS+G ++ E+++ + FP ++L Q G L S
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 248
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 95/231 (41%), Gaps = 36/231 (15%)
Query: 377 LGSGCFGSSYKASL--------STGAMMVVKRFK-QMNNVGREEFQEHMRRLGRLRHPNL 427
LG G FG K SL TG M+ VK K R +++ + L L H ++
Sbjct: 22 LGEGHFG---KVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 428 LPLVAYYYRKEEK--LLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQY 485
+ + EK LV E+VP SL L H S+ L + + +G+ Y
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAY 132
Query: 486 LYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM-------IAYKS 538
L+ S H ++ + NVLL+ + D+GL + + + + + +
Sbjct: 133 LH----SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 188
Query: 539 PEFLQLGRITKKTDVWSLGVLILEIMTG-----KFPANFLQQGKKADGDLA 584
PE L+ + +DVWS GV + E++T P FL+ A G +
Sbjct: 189 PECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMT 239
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 101/246 (41%), Gaps = 29/246 (11%)
Query: 365 DLHDLLRASAEI---LGSGCFGSSYKASLS------TGAMMVVKRFKQMNNVGRE-EFQE 414
DL ++ R + + LG G FG Y+ +S + + VK ++ + E +F
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 415 HMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQA-LGQPS-LDWPSR 472
+ +L H N++ + + + ++ E + L L + QPS L
Sbjct: 84 EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 473 LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN---ESLEPVLADYGLIPVMNQES- 528
L + + +A G QYL E I H I + N LL + D+G+ + + S
Sbjct: 144 LHVARDIACGCQYL--EENHFI--HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 199
Query: 529 -----AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDL 583
L + + PE G T KTD WS GVL+ EI F ++ K++ ++
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI----FSLGYMPYPSKSNQEV 255
Query: 584 ASWVNS 589
+V S
Sbjct: 256 LEFVTS 261
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 414 EHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALG---------- 463
E M+ +G+ H N++ L+ + ++ E+ K +L L + G
Sbjct: 92 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 464 -QPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL-- 520
+ + + + +A+G++YL S H + + NVL+ E+ +AD+GL
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 521 ----IPVMNQESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
I + L + + +PE L T ++DVWS GVL+ EI T
Sbjct: 206 DINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 34/213 (15%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVK-------RFKQMNNVG----REEFQEHMRRLGRLRHP 425
LG G FG Y+ A VVK K +N R EF +
Sbjct: 33 LGQGSFGMVYEGV----AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 426 NLLPLVAYYYRKEEKLLVHEFVPK-------RSLAVNLHGHQALGQPSLDWPSRLKIVKG 478
+++ L+ + + L++ E + + RSL + + L PSL +++
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAGE 146
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQE------L 532
+A G+ YL H + + N ++ E + D+G+ + + L
Sbjct: 147 IADGMAYLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 202
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + SPE L+ G T +DVWS GV++ EI T
Sbjct: 203 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 475 IVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMI 534
+V + KGL+Y++ S H +K N+ +NE E + D+GL + E ++
Sbjct: 131 LVYQMLKGLKYIH----SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVT 186
Query: 535 A-YKSPE-FLQLGRITKKTDVWSLGVLILEIMTGK 567
Y++PE L + D+WS+G ++ E++TGK
Sbjct: 187 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 34/213 (15%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVK-------RFKQMNNVG----REEFQEHMRRLGRLRHP 425
LG G FG Y+ A VVK K +N R EF +
Sbjct: 26 LGQGSFGMVYEGV----AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 426 NLLPLVAYYYRKEEKLLVHEFVPK-------RSLAVNLHGHQALGQPSLDWPSRLKIVKG 478
+++ L+ + + L++ E + + RSL + + L PSL +++
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAGE 139
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQE------L 532
+A G+ YL H + + N ++ E + D+G+ + + L
Sbjct: 140 IADGMAYLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 195
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + SPE L+ G T +DVWS GV++ EI T
Sbjct: 196 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 22/205 (10%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN-----VGREEFQEHMRRLGRLRHPNLLPL 430
+G G +G+ YKA +G + +K + N + +RRL HPN++ L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 431 --VAYYYRKEEKL---LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQY 485
V R + ++ LV E V + L L G P+ + +++ +GL +
Sbjct: 72 MDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPA---ETIKDLMRQFLRGLDF 127
Query: 486 LYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA---YKSPEFL 542
L+ H +K N+L+ LAD+GL + + + A ++ Y++PE L
Sbjct: 128 LHAN----CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVL 183
Query: 543 QLGRITKKTDVWSLGVLILEIMTGK 567
D+WS+G + E+ K
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 19/198 (9%)
Query: 377 LGSGCFGSSYKA---SLSTGAMMV-VKRFKQM-NNVGREEFQEHMRRLGRLRHPNLLPLV 431
+G G FG ++ S AM V +K K ++ RE+F + + + HP+++ L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
+ ++ E L L + SLD S + ++ L YL E
Sbjct: 78 GVI-TENPVWIIMELCTLGELRSFLQVRKY----SLDLASLILYAYQLSTALAYL--ESK 130
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMN-----QESAQELMIAYKSPEFLQLGR 546
+ H I + NVL++ + L D+GL M + S +L I + +PE + R
Sbjct: 131 RFV--HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 547 ITKKTDVWSLGVLILEIM 564
T +DVW GV + EI+
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 31/207 (14%)
Query: 377 LGSGCFGSSYKASL--------STGAMMVVKRFKQ-MNNVGREEFQEHMRRLGRLRHPNL 427
LG G FG K SL TG M+ VK K+ R +Q + L L H ++
Sbjct: 17 LGEGHFG---KVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 428 LPLVAYYYRKEEK--LLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQY 485
+ + EK LV E+VP SL L H +G L L + + +G+ Y
Sbjct: 74 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH-CVGLAQL-----LLFAQQICEGMAY 127
Query: 486 LYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM-------IAYKS 538
L+ + H + + NVLL+ + D+GL + + + + + +
Sbjct: 128 LHAQH----YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 183
Query: 539 PEFLQLGRITKKTDVWSLGVLILEIMT 565
PE L+ + +DVWS GV + E++T
Sbjct: 184 PECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 38/218 (17%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGRE-EFQEHMRRLGRLRHPNLLPLVAYY 434
LG G + + YK S T ++ +K + + G + L L+H N++ L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 435 YRKEEKLLVHEFVPKR--------SLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
+ ++ LV E++ K +N+H + + + +GL Y
Sbjct: 70 HTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLF-------------LFQLLRGLAYC 116
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKSPEF 541
+R+ H +K N+L+NE E LAD+GL IP ++ + + + Y+ P+
Sbjct: 117 HRQ----KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDN-EVVTLWYRPPDI 171
Query: 542 LQLGRITKKT--DVWSLGVLILEIMTGK--FPANFLQQ 575
L LG T D+W +G + E+ TG+ FP + +++
Sbjct: 172 L-LGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE 208
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRR----LGRLRHPNLLPL 430
E LG G FG A+ V +F + + + + R L LRHP+++ L
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74
Query: 431 VAYYYRKEEKLLVHEF---------VPKRSLAVNLHGHQALGQ--PSLDWPSRLKIVKGV 479
+ ++V E+ V K+ + + G + Q ++++ R KIV
Sbjct: 75 YDVITTPTDIVMVIEYAGGELFDYIVEKKRMTED-EGRRFFQQIICAIEYCHRHKIV--- 130
Query: 480 AKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA---Y 536
H +K N+LL+++L +AD+GL +M + + Y
Sbjct: 131 -----------------HRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNY 173
Query: 537 KSPEFLQLGRITK--KTDVWSLGVLILEIMTGKFP 569
+PE + G++ + DVWS G+++ ++ G+ P
Sbjct: 174 AAPEVIN-GKLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 101/246 (41%), Gaps = 29/246 (11%)
Query: 365 DLHDLLRASAEI---LGSGCFGSSYKASLS------TGAMMVVKRFKQMNNVGRE-EFQE 414
DL ++ R + + LG G FG Y+ +S + + VK ++ + E +F
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 97
Query: 415 HMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQA-LGQPS-LDWPSR 472
+ +L H N++ + + + ++ E + L L + QPS L
Sbjct: 98 EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 473 LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN---ESLEPVLADYGLIPVMNQES- 528
L + + +A G QYL E I H I + N LL + D+G+ + + S
Sbjct: 158 LHVARDIACGCQYL--EENHFI--HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 213
Query: 529 -----AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDL 583
L + + PE G T KTD WS GVL+ EI F ++ K++ ++
Sbjct: 214 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI----FSLGYMPYPSKSNQEV 269
Query: 584 ASWVNS 589
+V S
Sbjct: 270 LEFVTS 275
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 85/205 (41%), Gaps = 21/205 (10%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPL 430
++LG G FG +TG +K ++ + ++E + R L RHP L L
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 73
Query: 431 VAYYYRKEEKL-LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKG-VAKGLQYLYR 488
Y ++ ++L V E+ L +L + + R + + L+YL+
Sbjct: 74 -KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE------ERARFYGAEIVSALEYLH- 125
Query: 489 ELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQL 544
S + IK N++L++ + D+GL + A Y +PE L+
Sbjct: 126 ---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED 182
Query: 545 GRITKKTDVWSLGVLILEIMTGKFP 569
+ D W LGV++ E+M G+ P
Sbjct: 183 NDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPL 430
++LG G FG +TG +K ++ + ++E + R L RHP L L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKG-VAKGLQYLYRE 489
+ + V E+ L +L + + R + + L+YL+
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE------ERARFYGAEIVSALEYLH-- 122
Query: 490 LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLG 545
S + IK N++L++ + D+GL + A Y +PE L+
Sbjct: 123 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 180
Query: 546 RITKKTDVWSLGVLILEIMTGKFP 569
+ D W LGV++ E+M G+ P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 107/256 (41%), Gaps = 41/256 (16%)
Query: 345 VGGKKPEIKLSFVRDDVERFDLHDLLRASAEILGSGCFGSSYKAS-LSTGAMMVVKRF-K 402
+GG + FV VE +L +R +L G F Y+A + +G +KR
Sbjct: 7 LGGASGRDQSDFVGQTVELGELRLRVR---RVLAEGGFAFVYEAQDVGSGREYALKRLLS 63
Query: 403 QMNNVGREEFQE--HMRRLGRLRHPNLLPLV-AYYYRKEEK-------LLVHEFVPKRSL 452
R QE M++L HPN++ A KEE LL+ E K L
Sbjct: 64 NEEEKNRAIIQEVCFMKKLSG--HPNIVQFCSAASIGKEESDTGQAEFLLLTELC-KGQL 120
Query: 453 AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLE 512
L ++ G S D + LKI + +Q+++R+ P +I H +K N+LL+
Sbjct: 121 VEFLKKMESRGPLSCD--TVLKIFYQTCRAVQHMHRQKPPII--HRDLKVENLLLSNQGT 176
Query: 513 PVLADYGLIPVMNQE-----SAQELMIA-----------YKSPEFLQLGR---ITKKTDV 553
L D+G ++ SAQ + Y++PE + L I +K D+
Sbjct: 177 IKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDI 236
Query: 554 WSLGVLILEIMTGKFP 569
W+LG ++ + + P
Sbjct: 237 WALGCILYLLCFRQHP 252
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 34/213 (15%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVK-------RFKQMNNVG----REEFQEHMRRLGRLRHP 425
LG G FG Y+ A VVK K +N R EF +
Sbjct: 55 LGQGSFGMVYEGV----AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 110
Query: 426 NLLPLVAYYYRKEEKLLVHEFVPK-------RSLAVNLHGHQALGQPSLDWPSRLKIVKG 478
+++ L+ + + L++ E + + RSL + + L PSL +++
Sbjct: 111 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAGE 168
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQE------L 532
+A G+ YL H + + N ++ E + D+G+ + + L
Sbjct: 169 IADGMAYLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 224
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + SPE L+ G T +DVWS GV++ EI T
Sbjct: 225 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 31/207 (14%)
Query: 377 LGSGCFGSSYKASL--------STGAMMVVKRFKQ-MNNVGREEFQEHMRRLGRLRHPNL 427
LG G FG K SL TG M+ VK K+ R +Q + L L H ++
Sbjct: 16 LGEGHFG---KVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 428 LPLVAYYYRKEEK--LLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQY 485
+ + EK LV E+VP SL L H +G L L + + +G+ Y
Sbjct: 73 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH-CVGLAQL-----LLFAQQICEGMAY 126
Query: 486 LYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM-------IAYKS 538
L+ + H + + NVLL+ + D+GL + + + + + +
Sbjct: 127 LHAQH----YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 182
Query: 539 PEFLQLGRITKKTDVWSLGVLILEIMT 565
PE L+ + +DVWS GV + E++T
Sbjct: 183 PECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 85/205 (41%), Gaps = 21/205 (10%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPL 430
++LG G FG +TG +K ++ + ++E + R L RHP L L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 431 VAYYYRKEEKL-LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKG-VAKGLQYLYR 488
Y ++ ++L V E+ L +L + + R + + L+YL+
Sbjct: 71 -KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE------ERARFYGAEIVSALEYLH- 122
Query: 489 ELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQL 544
S + IK N++L++ + D+GL + A Y +PE L+
Sbjct: 123 ---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED 179
Query: 545 GRITKKTDVWSLGVLILEIMTGKFP 569
+ D W LGV++ E+M G+ P
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 85/205 (41%), Gaps = 21/205 (10%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPL 430
++LG G FG +TG +K ++ + ++E + R L RHP L L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 431 VAYYYRKEEKL-LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKG-VAKGLQYLYR 488
Y ++ ++L V E+ L +L + + R + + L+YL+
Sbjct: 71 -KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE------ERARFYGAEIVSALEYLH- 122
Query: 489 ELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQL 544
S + IK N++L++ + D+GL + A Y +PE L+
Sbjct: 123 ---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED 179
Query: 545 GRITKKTDVWSLGVLILEIMTGKFP 569
+ D W LGV++ E+M G+ P
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 95/231 (41%), Gaps = 36/231 (15%)
Query: 377 LGSGCFGSSYKASL--------STGAMMVVKRFK-QMNNVGREEFQEHMRRLGRLRHPNL 427
LG G FG K SL TG M+ VK K R +++ + L L H ++
Sbjct: 22 LGEGHFG---KVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 428 LPLVAYYYRKEEK--LLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQY 485
+ + EK LV E+VP SL L H S+ L + + +G+ Y
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAY 132
Query: 486 LYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM-------IAYKS 538
L+ + H ++ + NVLL+ + D+GL + + + + + +
Sbjct: 133 LHAQH----YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 188
Query: 539 PEFLQLGRITKKTDVWSLGVLILEIMTG-----KFPANFLQQGKKADGDLA 584
PE L+ + +DVWS GV + E++T P FL+ A G +
Sbjct: 189 PECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMT 239
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 27/209 (12%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN--------VGREEFQEHMRRLGRLRHPNL 427
+G G +G+ YKA +G + +K + N + +RRL HPN+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 428 LPL--VAYYYRKEEKL---LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLK-IVKGVAK 481
+ L V R + ++ LV E V + L L G P+ +K +++ +
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPA----ETIKDLMRQFLR 131
Query: 482 GLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA---YKS 538
GL +L+ H +K N+L+ LAD+GL + + + A ++ Y++
Sbjct: 132 GLDFLHAN----CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRA 187
Query: 539 PEFLQLGRITKKTDVWSLGVLILEIMTGK 567
PE L D+WS+G + E+ K
Sbjct: 188 PEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 19/198 (9%)
Query: 377 LGSGCFGSS----YKASLSTGAMMVVKRFKQM-NNVGREEFQEHMRRLGRLRHPNLLPLV 431
+G G FG Y + + + +K K ++ RE+F + + + HP+++ L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
+ ++ E L L + + SLD S + ++ L YL E
Sbjct: 80 GVI-TENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYL--ESK 132
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMN-----QESAQELMIAYKSPEFLQLGR 546
+ H I + NVL++ + L D+GL M + S +L I + +PE + R
Sbjct: 133 RFV--HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 190
Query: 547 ITKKTDVWSLGVLILEIM 564
T +DVW GV + EI+
Sbjct: 191 FTSASDVWMFGVCMWEIL 208
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 15/131 (11%)
Query: 442 LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIK 501
L+ EF+P SL L ++ ++ +LK + KG+ YL S H +
Sbjct: 102 LIMEFLPSGSLKEYLPKNKN----KINLKQQLKYAVQICKGMDYL----GSRQYVHRDLA 153
Query: 502 SSNVLLNESLEPVLADYGLIPVMNQESAQELM-------IAYKSPEFLQLGRITKKTDVW 554
+ NVL+ + + D+GL + + + + + +PE L + +DVW
Sbjct: 154 ARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVW 213
Query: 555 SLGVLILEIMT 565
S GV + E++T
Sbjct: 214 SFGVTLHELLT 224
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 19/198 (9%)
Query: 377 LGSGCFGSS----YKASLSTGAMMVVKRFKQM-NNVGREEFQEHMRRLGRLRHPNLLPLV 431
+G G FG Y + + + +K K ++ RE+F + + + HP+++ L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
+ ++ E L L + + SLD S + ++ L YL E
Sbjct: 81 GVI-TENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYL--ESK 133
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMN-----QESAQELMIAYKSPEFLQLGR 546
+ H I + NVL++ + L D+GL M + S +L I + +PE + R
Sbjct: 134 RFV--HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 191
Query: 547 ITKKTDVWSLGVLILEIM 564
T +DVW GV + EI+
Sbjct: 192 FTSASDVWMFGVCMWEIL 209
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLL 428
++LGSG FG+ YK + +K ++ + +E + + + +P++
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L+ + +P L V H Q L+W + +A+G+ YL
Sbjct: 78 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAEGMNYL 130
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+GL ++ E + K P +++ L
Sbjct: 131 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 186
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 187 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 233
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 34/213 (15%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVK-------RFKQMNNVG----REEFQEHMRRLGRLRHP 425
LG G FG Y+ A VVK K +N R EF +
Sbjct: 23 LGQGSFGMVYEGV----AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 78
Query: 426 NLLPLVAYYYRKEEKLLVHEFVPK-------RSLAVNLHGHQALGQPSLDWPSRLKIVKG 478
+++ L+ + + L++ E + + RSL + + L PSL +++
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS--KMIQMAGE 136
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQE------L 532
+A G+ YL H + + N ++ E + D+G+ + + L
Sbjct: 137 IADGMAYLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 192
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + SPE L+ G T +DVWS GV++ EI T
Sbjct: 193 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 19/198 (9%)
Query: 377 LGSGCFGSS----YKASLSTGAMMVVKRFKQM-NNVGREEFQEHMRRLGRLRHPNLLPLV 431
+G G FG Y + + + +K K ++ RE+F + + + HP+++ L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
+ ++ E L L + + SLD S + ++ L YL E
Sbjct: 83 GVI-TENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYL--ESK 135
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMN-----QESAQELMIAYKSPEFLQLGR 546
+ H I + NVL++ + L D+GL M + S +L I + +PE + R
Sbjct: 136 RFV--HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 193
Query: 547 ITKKTDVWSLGVLILEIM 564
T +DVW GV + EI+
Sbjct: 194 FTSASDVWMFGVCMWEIL 211
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 85/205 (41%), Gaps = 21/205 (10%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPL 430
++LG G FG +TG +K ++ + ++E + R L RHP L L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 431 VAYYYRKEEKL-LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKG-VAKGLQYLYR 488
Y ++ ++L V E+ L +L + + R + + L+YL+
Sbjct: 71 -KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE------ERARFYGAEIVSALEYLH- 122
Query: 489 ELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQL 544
S + IK N++L++ + D+GL + A Y +PE L+
Sbjct: 123 ---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED 179
Query: 545 GRITKKTDVWSLGVLILEIMTGKFP 569
+ D W LGV++ E+M G+ P
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 15/131 (11%)
Query: 442 LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIK 501
L+ EF+P SL L ++ ++ +LK + KG+ YL S H +
Sbjct: 90 LIMEFLPSGSLKEYLPKNKN----KINLKQQLKYAVQICKGMDYL----GSRQYVHRDLA 141
Query: 502 SSNVLLNESLEPVLADYGLIPVMNQESAQELM-------IAYKSPEFLQLGRITKKTDVW 554
+ NVL+ + + D+GL + + + + + +PE L + +DVW
Sbjct: 142 ARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVW 201
Query: 555 SLGVLILEIMT 565
S GV + E++T
Sbjct: 202 SFGVTLHELLT 212
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 34/213 (15%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVK-------RFKQMNNVG----REEFQEHMRRLGRLRHP 425
LG G FG Y+ A VVK K +N R EF +
Sbjct: 33 LGQGSFGMVYEGV----AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 426 NLLPLVAYYYRKEEKLLVHEFVPK-------RSLAVNLHGHQALGQPSLDWPSRLKIVKG 478
+++ L+ + + L++ E + + RSL + + L PSL +++
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS--KMIQMAGE 146
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQE------L 532
+A G+ YL H + + N ++ E + D+G+ + + L
Sbjct: 147 IADGMAYLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 202
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + SPE L+ G T +DVWS GV++ EI T
Sbjct: 203 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 81/205 (39%), Gaps = 23/205 (11%)
Query: 375 EILGSGCFG----SSYKASLSTGAMMVVKRFKQ---MNNVGREEFQEHMRRLGRLRHPNL 427
E LG G FG + A + VK K ++F + + L H NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 428 LPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ L K+ V E P SL L HQ G L SR + VA+G+ YL
Sbjct: 84 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAV--QVAEGMGYL- 137
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM-------IAYKSPE 540
E I H + + N+LL + D+GL+ + Q +M A+ +PE
Sbjct: 138 -ESKRFI--HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 194
Query: 541 FLQLGRITKKTDVWSLGVLILEIMT 565
L+ + +D W GV + E+ T
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 29/246 (11%)
Query: 365 DLHDLLRASAEI---LGSGCFGSSYKASLS------TGAMMVVKRFKQMNNVGRE-EFQE 414
DL ++ R + + LG G FG Y+ +S + + VK ++ + E +F
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 415 HMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQA-LGQPS-LDWPSR 472
+ + H N++ + + + ++ E + L L + QPS L
Sbjct: 84 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 473 LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN---ESLEPVLADYGLIPVMNQES- 528
L + + +A G QYL E I H I + N LL + D+G+ + + S
Sbjct: 144 LHVARDIACGCQYL--EENHFI--HRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASY 199
Query: 529 -----AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDL 583
L + + PE G T KTD WS GVL+ EI F ++ K++ ++
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI----FSLGYMPYPSKSNQEV 255
Query: 584 ASWVNS 589
+V S
Sbjct: 256 LEFVTS 261
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 409 REEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD 468
RE+F + + + HP+++ L+ + ++ E L L + SLD
Sbjct: 83 REKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKY----SLD 137
Query: 469 WPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMN--- 525
S + ++ L YL E + H I + NVL++ + L D+GL M
Sbjct: 138 LASLILYAYQLSTALAYL--ESKRFV--HRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 193
Query: 526 --QESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIM 564
+ S +L I + +PE + R T +DVW GV + EI+
Sbjct: 194 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL---IPVMNQESAQELMIA 535
+ GL+ L+RE + +K N+LL++ ++D GL +P + +
Sbjct: 295 ICCGLEDLHRER----IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 536 YKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKK 578
Y +PE ++ R T D W+LG L+ E++ G+ P F Q+ KK
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP--FQQRKKK 391
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 103/235 (43%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKA-SLSTG-----AMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLL 428
++LGSG FG+ YK + G + +++ + + +E + + + +P++
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L+ + +P L V H Q L+W + +AKG+ YL
Sbjct: 115 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 167
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+GL ++ E + K P +++ L
Sbjct: 168 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 223
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 224 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 270
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL---IPVMNQESAQELMIA 535
+ GL+ L+RE + +K N+LL++ ++D GL +P + +
Sbjct: 295 ICCGLEDLHRER----IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 536 YKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKK 578
Y +PE ++ R T D W+LG L+ E++ G+ P F Q+ KK
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP--FQQRKKK 391
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 29/246 (11%)
Query: 365 DLHDLLRASAEI---LGSGCFGSSYKASLS------TGAMMVVKRFKQMNNVGRE-EFQE 414
DL ++ R + + LG G FG Y+ +S + + VK ++ + E +F
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 82
Query: 415 HMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQA-LGQPS-LDWPSR 472
+ + H N++ + + + ++ E + L L + QPS L
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 142
Query: 473 LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN---ESLEPVLADYGLIPVMNQES- 528
L + + +A G QYL E I H I + N LL + D+G+ + + S
Sbjct: 143 LHVARDIACGCQYL--EENHFI--HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 198
Query: 529 -----AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDL 583
L + + PE G T KTD WS GVL+ EI F ++ K++ ++
Sbjct: 199 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI----FSLGYMPYPSKSNQEV 254
Query: 584 ASWVNS 589
+V S
Sbjct: 255 LEFVTS 260
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 29/246 (11%)
Query: 365 DLHDLLRASAEI---LGSGCFGSSYKASLS------TGAMMVVKRFKQMNNVGRE-EFQE 414
DL ++ R + + LG G FG Y+ +S + + VK ++ + E +F
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 97
Query: 415 HMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQA-LGQPS-LDWPSR 472
+ + H N++ + + + ++ E + L L + QPS L
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 473 LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN---ESLEPVLADYGLIPVMNQES- 528
L + + +A G QYL E I H I + N LL + D+G+ + + S
Sbjct: 158 LHVARDIACGCQYL--EENHFI--HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 213
Query: 529 -----AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDL 583
L + + PE G T KTD WS GVL+ EI F ++ K++ ++
Sbjct: 214 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI----FSLGYMPYPSKSNQEV 269
Query: 584 ASWVNS 589
+V S
Sbjct: 270 LEFVTS 275
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 19/198 (9%)
Query: 377 LGSGCFGSS----YKASLSTGAMMVVKRFKQM-NNVGREEFQEHMRRLGRLRHPNLLPLV 431
+G G FG Y + + + +K K ++ RE+F + + + HP+++ L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
+ ++ E L L + + SLD S + ++ L YL E
Sbjct: 78 GVI-TENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYL--ESK 130
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMN-----QESAQELMIAYKSPEFLQLGR 546
+ H I + NVL++ + L D+GL M + S +L I + +PE + R
Sbjct: 131 RFV--HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 547 ITKKTDVWSLGVLILEIM 564
T +DVW GV + EI+
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 81/205 (39%), Gaps = 23/205 (11%)
Query: 375 EILGSGCFG----SSYKASLSTGAMMVVKRFKQ---MNNVGREEFQEHMRRLGRLRHPNL 427
E LG G FG + A + VK K ++F + + L H NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 428 LPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ L K+ V E P SL L HQ G L SR + VA+G+ YL
Sbjct: 78 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAV--QVAEGMGYL- 131
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM-------IAYKSPE 540
E I H + + N+LL + D+GL+ + Q +M A+ +PE
Sbjct: 132 -ESKRFI--HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 541 FLQLGRITKKTDVWSLGVLILEIMT 565
L+ + +D W GV + E+ T
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLL 428
++LGSG FG+ YK + +K ++ + +E + + + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L++ + +P L V H Q L+W + +AKG+ YL
Sbjct: 83 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 135
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+G ++ E + K P +++ L
Sbjct: 136 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 238
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLL 428
++LGSG FG+ YK + +K ++ + +E + + + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L++ + +P L V H Q L+W + +AKG+ YL
Sbjct: 83 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 135
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+G ++ E + K P +++ L
Sbjct: 136 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 238
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 13/184 (7%)
Query: 393 GAMMVVKRFKQMNNVGRE--EFQEHMRRLGRLRHPNLLPLVAYYYR--KEEKLLVHEFVP 448
G +VVK K + R+ +F E RL HPN+LP++ L+ ++P
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92
Query: 449 KRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN 508
SL LH +D +K +A+G+ +L+ P + P + S +V+++
Sbjct: 93 YGSLYNVLHEGTNF---VVDQSQAVKFALDMARGMAFLHTLEP--LIPRHALNSRSVMID 147
Query: 509 ESLEPVLADYGLIPVMNQESAQELMIAYKSPEFLQL---GRITKKTDVWSLGVLILEIMT 565
E + ++ + Q + A+ +PE LQ + D+WS VL+ E++T
Sbjct: 148 EDMTARIS-MADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVT 206
Query: 566 GKFP 569
+ P
Sbjct: 207 REVP 210
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 19/198 (9%)
Query: 377 LGSGCFGSS----YKASLSTGAMMVVKRFKQM-NNVGREEFQEHMRRLGRLRHPNLLPLV 431
+G G FG Y + + + +K K ++ RE+F + + + HP+++ L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
+ ++ E L L + + SLD S + ++ L YL E
Sbjct: 75 GVI-TENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYL--ESK 127
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMN-----QESAQELMIAYKSPEFLQLGR 546
+ H I + NVL++ + L D+GL M + S +L I + +PE + R
Sbjct: 128 RFV--HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 185
Query: 547 ITKKTDVWSLGVLILEIM 564
T +DVW GV + EI+
Sbjct: 186 FTSASDVWMFGVCMWEIL 203
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 83/205 (40%), Gaps = 20/205 (9%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRR-----LGRLRHPNLLP 429
+++G G FG A + + Q + +++ ++H+ L ++HP L+
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 430 LVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQP-SLDWPSRLKIVKGVAKGLQYLYR 488
L + ++ V +++ L +L + +P + + + + G L +YR
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYR 163
Query: 489 ELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQL 544
+L K N+LL+ VL D+GL + ++ Y +PE L
Sbjct: 164 DL----------KPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHK 213
Query: 545 GRITKKTDVWSLGVLILEIMTGKFP 569
+ D W LG ++ E++ G P
Sbjct: 214 QPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 80/204 (39%), Gaps = 18/204 (8%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQE---HMRRLGRLRHPNLLPLV 431
E LG G F + T + + + +FQ+ R +L+HPN++ L
Sbjct: 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 94
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
+ LV + V L ++ + + ++ + + + Y +
Sbjct: 95 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAYCH---- 145
Query: 492 SLIAPHGHIKSSNVLLNESLEPV---LADYGLIPVMNQESAQELMIA---YKSPEFLQLG 545
S H ++K N+LL + LAD+GL +N A Y SPE L+
Sbjct: 146 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 205
Query: 546 RITKKTDVWSLGVLILEIMTGKFP 569
+K D+W+ GV++ ++ G P
Sbjct: 206 PYSKPVDIWACGVILYILLVGYPP 229
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLL 428
++LGSG FG+ YK + +K ++ + +E + + + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L+ + +P L V H Q L+W + +AKG+ YL
Sbjct: 83 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 135
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+G ++ E + K P +++ L
Sbjct: 136 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 238
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 29/246 (11%)
Query: 365 DLHDLLRASAEI---LGSGCFGSSYKASLS------TGAMMVVKRFKQMNNVGRE-EFQE 414
DL ++ R + + LG G FG Y+ +S + + VK ++ + E +F
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 415 HMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQA-LGQPS-LDWPSR 472
+ + H N++ + + + ++ E + L L + QPS L
Sbjct: 84 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 473 LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN---ESLEPVLADYGLIPVMNQES- 528
L + + +A G QYL E I H I + N LL + D+G+ + + S
Sbjct: 144 LHVARDIACGCQYL--EENHFI--HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 199
Query: 529 -----AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDL 583
L + + PE G T KTD WS GVL+ EI F ++ K++ ++
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI----FSLGYMPYPSKSNQEV 255
Query: 584 ASWVNS 589
+V S
Sbjct: 256 LEFVTS 261
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLL 428
++LGSG FG+ YK + +K ++ + +E + + + +P++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L+ + +P L V H Q L+W + +AKG+ YL
Sbjct: 88 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 140
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+G ++ E + K P +++ L
Sbjct: 141 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 243
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLL 428
++L SG FG+ YK + +K ++ + +E + + + +P++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L++ + +P L V H Q L+W + +AKG+ YL
Sbjct: 88 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 140
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+GL ++ E + K P +++ L
Sbjct: 141 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 243
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 20/203 (9%)
Query: 377 LGSGCFGSSY----KASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LGSG +G K + + A+ ++K+ + + L +L HPN++ L
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
++ K LV E L + Q + I+K V G YL++ +
Sbjct: 72 FFEDKRNYYLVMEVYRGGELFDEIILRQKFSE-----VDAAVIMKQVLSGTTYLHKH--N 124
Query: 493 LIAPHGHIKSSNVLLNESLEPVL---ADYGL---IPVMNQESAQELMIAYKSPEFLQLGR 546
++ H +K N+LL L D+GL V + + Y +PE L+ +
Sbjct: 125 IV--HRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLR-KK 181
Query: 547 ITKKTDVWSLGVLILEIMTGKFP 569
+K DVWS GV++ ++ G P
Sbjct: 182 YDEKCDVWSCGVILYILLCGYPP 204
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 81/205 (39%), Gaps = 23/205 (11%)
Query: 375 EILGSGCFG----SSYKASLSTGAMMVVKRFKQ---MNNVGREEFQEHMRRLGRLRHPNL 427
E LG G FG + A + VK K ++F + + L H NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 428 LPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ L K+ V E P SL L HQ G L SR + VA+G+ YL
Sbjct: 84 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAV--QVAEGMGYL- 137
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM-------IAYKSPE 540
E I H + + N+LL + D+GL+ + Q +M A+ +PE
Sbjct: 138 -ESKRFI--HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 194
Query: 541 FLQLGRITKKTDVWSLGVLILEIMT 565
L+ + +D W GV + E+ T
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 10/83 (12%)
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-----YKSPEFLQL-----GR 546
H IK N+L++ + LAD+G + ++ + +A Y SPE LQ GR
Sbjct: 198 HRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGR 257
Query: 547 ITKKTDVWSLGVLILEIMTGKFP 569
+ D WSLGV + E++ G+ P
Sbjct: 258 YGPECDWWSLGVCMYEMLYGETP 280
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 19/167 (11%)
Query: 410 EEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDW 469
E F E + +L H +L+ + +E +LV EFV SL L ++ ++ W
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNK--NCINILW 114
Query: 470 PSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLL-----NESLEPV---LADYGL- 520
+L++ K +A + +L E +LI HG++ + N+LL ++ P L+D G+
Sbjct: 115 --KLEVAKQLAWAMHFL--EENTLI--HGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168
Query: 521 IPVMNQESAQELMIAYKSPEFLQLGR-ITKKTDVWSLGVLILEIMTG 566
I V+ ++ QE I + PE ++ + + TD WS G + EI +G
Sbjct: 169 ITVLPKDILQE-RIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 97/226 (42%), Gaps = 40/226 (17%)
Query: 374 AEILGSGCFGSSYKASL------STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLR---H 424
+ LG G FG KA+ + + VK K+ N E ++ + L+ H
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE--NASPSELRDLLSEFNVLKQVNH 85
Query: 425 PNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALG-----------QPSLDWPSRL 473
P+++ L + LL+ E+ SL L + +G SLD P
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 474 KIVKG--------VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMN 525
+ G +++G+QYL SL+ H + + N+L+ E + ++D+GL +
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEM--SLV--HRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 526 QE------SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+E S + + + + E L T ++DVWS GVL+ EI+T
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 84/213 (39%), Gaps = 34/213 (15%)
Query: 377 LGSGCFGSSYKASLSTGAMMVVK-------RFKQMNNVG----REEFQEHMRRLGRLRHP 425
LG G FG Y+ A VVK K +N R EF +
Sbjct: 20 LGQGSFGMVYEGV----AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 426 NLLPLVAYYYRKEEKLLVHEFVPK-------RSLAVNLHGHQALGQPSLDWPSRLKIVKG 478
+++ L+ + + L++ E + + RSL + + L PSL +++
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAGE 133
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQE------L 532
+A G+ YL H + + N + E + D+G+ + + L
Sbjct: 134 IADGMAYLNANK----FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 189
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + SPE L+ G T +DVWS GV++ EI T
Sbjct: 190 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLL 428
++L SG FG+ YK + +K ++ + +E + + + +P++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L+ + +P L V H Q L+W + +AKG+ YL
Sbjct: 88 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 140
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+GL ++ E + K P +++ L
Sbjct: 141 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 243
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLL 428
++L SG FG+ YK + +K ++ + +E + + + +P++
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L+ + +P L V H Q L+W + +AKG+ YL
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 133
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+GL ++ E + K P +++ L
Sbjct: 134 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 236
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 13/201 (6%)
Query: 377 LGSGCFGSSYKAS-LSTGAMMVVKR---FKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
+G G F Y+A+ L G + +K+ F M+ R + + + L +L HPN++ A
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
+ E +V E L+ + H + + + K + L++++ S
Sbjct: 100 SFIEDNELNIVLELADAGDLS-RMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH----S 154
Query: 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPEFLQLGRIT 548
H IK +NV + + L D GL + ++ + Y SPE +
Sbjct: 155 RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYN 214
Query: 549 KKTDVWSLGVLILEIMTGKFP 569
K+D+WSLG L+ E+ + P
Sbjct: 215 FKSDIWSLGCLLYEMAALQSP 235
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 29/246 (11%)
Query: 365 DLHDLLRASAEI---LGSGCFGSSYKASLS------TGAMMVVKRFKQMNNVGRE-EFQE 414
DL ++ R + + LG G FG Y+ +S + + VK ++ + E +F
Sbjct: 30 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 89
Query: 415 HMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQA-LGQPS-LDWPSR 472
+ + H N++ + + + ++ E + L L + QPS L
Sbjct: 90 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 149
Query: 473 LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN---ESLEPVLADYGLIPVMNQES- 528
L + + +A G QYL E I H I + N LL + D+G+ + + S
Sbjct: 150 LHVARDIACGCQYL--EENHFI--HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 205
Query: 529 -----AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDL 583
L + + PE G T KTD WS GVL+ EI F ++ K++ ++
Sbjct: 206 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI----FSLGYMPYPSKSNQEV 261
Query: 584 ASWVNS 589
+V S
Sbjct: 262 LEFVTS 267
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLL 428
++LGSG FG+ YK + +K ++ + +E + + + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L+ + +P L V H Q L+W + +AKG+ YL
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 133
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+G ++ E + K P +++ L
Sbjct: 134 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 236
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 81/205 (39%), Gaps = 23/205 (11%)
Query: 375 EILGSGCFG----SSYKASLSTGAMMVVKRFKQ---MNNVGREEFQEHMRRLGRLRHPNL 427
E LG G FG + A + VK K ++F + + L H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 428 LPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ L K+ V E P SL L HQ G L SR + VA+G+ YL
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAV--QVAEGMGYL- 127
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM-------IAYKSPE 540
E I H + + N+LL + D+GL+ + Q +M A+ +PE
Sbjct: 128 -ESKRFI--HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 184
Query: 541 FLQLGRITKKTDVWSLGVLILEIMT 565
L+ + +D W GV + E+ T
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 29/246 (11%)
Query: 365 DLHDLLRASAEI---LGSGCFGSSYKASLS------TGAMMVVKRFKQMNNVGRE-EFQE 414
DL ++ R + + LG G FG Y+ +S + + VK ++ + E +F
Sbjct: 40 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 99
Query: 415 HMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQA-LGQPS-LDWPSR 472
+ + H N++ + + + ++ E + L L + QPS L
Sbjct: 100 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 159
Query: 473 LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN---ESLEPVLADYGLIPVMNQES- 528
L + + +A G QYL E I H I + N LL + D+G+ + + S
Sbjct: 160 LHVARDIACGCQYL--EENHFI--HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 215
Query: 529 -----AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDL 583
L + + PE G T KTD WS GVL+ EI F ++ K++ ++
Sbjct: 216 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI----FSLGYMPYPSKSNQEV 271
Query: 584 ASWVNS 589
+V S
Sbjct: 272 LEFVTS 277
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 375 EILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLL 428
++LGSG FG+ YK + +K ++ + +E + + + +P++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 429 PLVAYYYRKEEKLLVHEFVPKRSL--AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
L+ +L++ + +P L V H Q L+W + +AKG+ YL
Sbjct: 85 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 137
Query: 487 YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSP-EFLQLG 545
E L+ H + + NVL+ + D+G ++ E + K P +++ L
Sbjct: 138 --EDRRLV--HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 193
Query: 546 RI-----TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595
I T ++DVWS GV + E+MT K DG AS ++S+L G+
Sbjct: 194 SILHRIYTHQSDVWSYGVTVWELMTFG--------SKPYDGIPASEISSILEKGE 240
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 29/246 (11%)
Query: 365 DLHDLLRASAEI---LGSGCFGSSYKASLS------TGAMMVVKRFKQMNNVGRE-EFQE 414
DL ++ R + + LG G FG Y+ +S + + VK ++ + E +F
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 82
Query: 415 HMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQA-LGQPS-LDWPSR 472
+ + H N++ + + + ++ E + L L + QPS L
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 142
Query: 473 LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN---ESLEPVLADYGLIPVMNQES- 528
L + + +A G QYL E I H I + N LL + D+G+ + + S
Sbjct: 143 LHVARDIACGCQYL--EENHFI--HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 198
Query: 529 -----AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDL 583
L + + PE G T KTD WS GVL+ EI F ++ K++ ++
Sbjct: 199 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI----FSLGYMPYPSKSNQEV 254
Query: 584 ASWVNS 589
+V S
Sbjct: 255 LEFVTS 260
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 94/239 (39%), Gaps = 42/239 (17%)
Query: 354 LSFVRDDVERFDLHDLLRASAEILGSGCFGSSYKA-SLSTGAMMVVK-----RFKQMNNV 407
L DDV D+++L E++G G F + + TG VK +F +
Sbjct: 13 LDMADDDVLFEDVYEL----CEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGL 68
Query: 408 GREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSL 467
E+ + L+HP+++ L+ Y +V EF+ L + G
Sbjct: 69 STEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAG---- 124
Query: 468 DWPSRLKIVKGVAKGLQYLYRELPSLIAPHGH------IKSSNVLL--NESLEPV-LADY 518
V A Y+ + L +L H + +K NVLL E+ PV L D+
Sbjct: 125 -------FVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDF 177
Query: 519 GLIPVMNQESAQELMIA--------YKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFP 569
G+ + + ++A + +PE ++ K DVW GV++ +++G P
Sbjct: 178 GVAIQLGESG----LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 81/205 (39%), Gaps = 23/205 (11%)
Query: 375 EILGSGCFG----SSYKASLSTGAMMVVKRFKQ---MNNVGREEFQEHMRRLGRLRHPNL 427
E LG G FG + A + VK K ++F + + L H NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 428 LPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ L K+ V E P SL L HQ G L SR + VA+G+ YL
Sbjct: 78 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAV--QVAEGMGYL- 131
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM-------IAYKSPE 540
E I H + + N+LL + D+GL+ + Q +M A+ +PE
Sbjct: 132 -ESKRFI--HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 541 FLQLGRITKKTDVWSLGVLILEIMT 565
L+ + +D W GV + E+ T
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 29/246 (11%)
Query: 365 DLHDLLRASAEI---LGSGCFGSSYKASLS------TGAMMVVKRFKQMNNVGRE-EFQE 414
DL ++ R + + LG G FG Y+ +S + + VK ++ + E +F
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLM 97
Query: 415 HMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQA-LGQPS-LDWPSR 472
+ + H N++ + + + ++ E + L L + QPS L
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 473 LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN---ESLEPVLADYGLIPVMNQES- 528
L + + +A G QYL E I H I + N LL + D+G+ + + S
Sbjct: 158 LHVARDIACGCQYL--EENHFI--HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 213
Query: 529 -----AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDL 583
L + + PE G T KTD WS GVL+ EI F ++ K++ ++
Sbjct: 214 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI----FSLGYMPYPSKSNQEV 269
Query: 584 ASWVNS 589
+V S
Sbjct: 270 LEFVTS 275
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 29/246 (11%)
Query: 365 DLHDLLRASAEI---LGSGCFGSSYKASLS------TGAMMVVKRFKQMNNVGRE-EFQE 414
DL ++ R + + LG G FG Y+ +S + + VK ++ + E +F
Sbjct: 15 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 74
Query: 415 HMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQA-LGQPS-LDWPSR 472
+ + H N++ + + + ++ E + L L + QPS L
Sbjct: 75 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 134
Query: 473 LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN---ESLEPVLADYGLIPVMNQES- 528
L + + +A G QYL E I H I + N LL + D+G+ + + S
Sbjct: 135 LHVARDIACGCQYL--EENHFI--HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 190
Query: 529 -----AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDL 583
L + + PE G T KTD WS GVL+ EI F ++ K++ ++
Sbjct: 191 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI----FSLGYMPYPSKSNQEV 246
Query: 584 ASWVNS 589
+V S
Sbjct: 247 LEFVTS 252
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 80/204 (39%), Gaps = 18/204 (8%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQE---HMRRLGRLRHPNLLPLV 431
E LG G F + T + + + +FQ+ R +L+HPN++ L
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
+ LV + V L ++ + + ++ + + + Y +
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAYCH---- 122
Query: 492 SLIAPHGHIKSSNVLLNESLEPV---LADYGLIPVMNQESAQELMIA---YKSPEFLQLG 545
S H ++K N+LL + LAD+GL +N A Y SPE L+
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 182
Query: 546 RITKKTDVWSLGVLILEIMTGKFP 569
+K D+W+ GV++ ++ G P
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPP 206
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 462 LGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI 521
+G P P + + G+ YL+ + H IK N+LL+E ++D+GL
Sbjct: 98 IGMPE---PDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLA 150
Query: 522 PVMNQESAQELM------IAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFP 569
V + + L+ + Y +PE L+ + DVWS G+++ ++ G+ P
Sbjct: 151 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 81/205 (39%), Gaps = 23/205 (11%)
Query: 375 EILGSGCFG----SSYKASLSTGAMMVVKRFKQ---MNNVGREEFQEHMRRLGRLRHPNL 427
E LG G FG + A + VK K ++F + + L H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 428 LPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ L K+ V E P SL L HQ G L SR + VA+G+ YL
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAV--QVAEGMGYL- 127
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM-------IAYKSPE 540
E I H + + N+LL + D+GL+ + Q +M A+ +PE
Sbjct: 128 -ESKRFI--HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 541 FLQLGRITKKTDVWSLGVLILEIMT 565
L+ + +D W GV + E+ T
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 462 LGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI 521
+G P P + + G+ YL+ + H IK N+LL+E ++D+GL
Sbjct: 99 IGMPE---PDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLA 151
Query: 522 PVMNQESAQELM------IAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFP 569
V + + L+ + Y +PE L+ + DVWS G+++ ++ G+ P
Sbjct: 152 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 462 LGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI 521
+G P P + + G+ YL+ + H IK N+LL+E ++D+GL
Sbjct: 99 IGMPE---PDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLA 151
Query: 522 PVMNQESAQELM------IAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFP 569
V + + L+ + Y +PE L+ + DVWS G+++ ++ G+ P
Sbjct: 152 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 462 LGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI 521
+G P P + + G+ YL+ + H IK N+LL+E ++D+GL
Sbjct: 99 IGMPE---PDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLA 151
Query: 522 PVMNQESAQELM------IAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFP 569
V + + L+ + Y +PE L+ + DVWS G+++ ++ G+ P
Sbjct: 152 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 80/204 (39%), Gaps = 18/204 (8%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQE---HMRRLGRLRHPNLLPLV 431
E LG G F + T + + + +FQ+ R +L+HPN++ L
Sbjct: 11 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 70
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
+ LV + V L ++ + + ++ + + + Y +
Sbjct: 71 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAYCH---- 121
Query: 492 SLIAPHGHIKSSNVLLNESLEPV---LADYGLIPVMNQESAQELMIA---YKSPEFLQLG 545
S H ++K N+LL + LAD+GL +N A Y SPE L+
Sbjct: 122 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 181
Query: 546 RITKKTDVWSLGVLILEIMTGKFP 569
+K D+W+ GV++ ++ G P
Sbjct: 182 PYSKPVDIWACGVILYILLVGYPP 205
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 462 LGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI 521
+G P P + + G+ YL+ + H IK N+LL+E ++D+GL
Sbjct: 100 IGMPE---PDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLA 152
Query: 522 PVMNQESAQELM------IAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFP 569
V + + L+ + Y +PE L+ + DVWS G+++ ++ G+ P
Sbjct: 153 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 462 LGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI 521
+G P P + + G+ YL+ + H IK N+LL+E ++D+GL
Sbjct: 99 IGMPE---PDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLA 151
Query: 522 PVMNQESAQELM------IAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFP 569
V + + L+ + Y +PE L+ + DVWS G+++ ++ G+ P
Sbjct: 152 TVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 462 LGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI 521
+G P P + + G+ YL+ + H IK N+LL+E ++D+GL
Sbjct: 99 IGMPE---PDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLA 151
Query: 522 PVMNQESAQELM------IAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFP 569
V + + L+ + Y +PE L+ + DVWS G+++ ++ G+ P
Sbjct: 152 TVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 462 LGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI 521
+G P P + + G+ YL+ + H IK N+LL+E ++D+GL
Sbjct: 99 IGMPE---PDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLA 151
Query: 522 PVMNQESAQELM------IAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFP 569
V + + L+ + Y +PE L+ + DVWS G+++ ++ G+ P
Sbjct: 152 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 462 LGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI 521
+G P P + + G+ YL+ + H IK N+LL+E ++D+GL
Sbjct: 99 IGMPE---PDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLA 151
Query: 522 PVMNQESAQELM------IAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFP 569
V + + L+ + Y +PE L+ + DVWS G+++ ++ G+ P
Sbjct: 152 TVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 462 LGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI 521
+G P P + + G+ YL+ + H IK N+LL+E ++D+GL
Sbjct: 99 IGMPE---PDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLA 151
Query: 522 PVMNQESAQELM------IAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFP 569
V + + L+ + Y +PE L+ + DVWS G+++ ++ G+ P
Sbjct: 152 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 29/246 (11%)
Query: 365 DLHDLLRASAEI---LGSGCFGSSYKASLS------TGAMMVVKRFKQMNNVGRE-EFQE 414
DL ++ R + + LG G FG Y+ +S + + VK ++ + E +F
Sbjct: 50 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 109
Query: 415 HMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQAL-GQPS-LDWPSR 472
+ + H N++ + + + ++ E + L L + QPS L
Sbjct: 110 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 169
Query: 473 LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN---ESLEPVLADYGLIPVMNQES- 528
L + + +A G QYL E I H I + N LL + D+G+ + + S
Sbjct: 170 LHVARDIACGCQYL--EENHFI--HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 225
Query: 529 -----AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDL 583
L + + PE G T KTD WS GVL+ EI F ++ K++ ++
Sbjct: 226 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI----FSLGYMPYPSKSNQEV 281
Query: 584 ASWVNS 589
+V S
Sbjct: 282 LEFVTS 287
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 462 LGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI 521
+G P P + + G+ YL+ + H IK N+LL+E ++D+GL
Sbjct: 99 IGMPE---PDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLA 151
Query: 522 PVMNQESAQELM------IAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFP 569
V + + L+ + Y +PE L+ + DVWS G+++ ++ G+ P
Sbjct: 152 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 40/226 (17%)
Query: 374 AEILGSGCFGSSYKASL------STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLR---H 424
+ LG G FG KA+ + + VK K+ N E ++ + L+ H
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE--NASPSELRDLLSEFNVLKQVNH 85
Query: 425 PNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALG-----------QPSLDWPSRL 473
P+++ L + LL+ E+ SL L + +G SLD P
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 474 KIVKG--------VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMN 525
+ G +++G+QYL + H + + N+L+ E + ++D+GL +
Sbjct: 146 ALTMGDLISFAWQISQGMQYL----AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 526 QE------SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+E S + + + + E L T ++DVWS GVL+ EI+T
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 462 LGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI 521
+G P P + + G+ YL+ + H IK N+LL+E ++D+GL
Sbjct: 100 IGMPE---PDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLA 152
Query: 522 PVMNQESAQELM------IAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFP 569
V + + L+ + Y +PE L+ + DVWS G+++ ++ G+ P
Sbjct: 153 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 80/204 (39%), Gaps = 18/204 (8%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQE---HMRRLGRLRHPNLLPLV 431
E LG G F + T + + + +FQ+ R +L+HPN++ L
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 432 AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP 491
+ LV + V L ++ + + ++ + + + Y +
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAYCH---- 122
Query: 492 SLIAPHGHIKSSNVLLNESLEPV---LADYGLIPVMNQESAQELMIA---YKSPEFLQLG 545
S H ++K N+LL + LAD+GL +N A Y SPE L+
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 182
Query: 546 RITKKTDVWSLGVLILEIMTGKFP 569
+K D+W+ GV++ ++ G P
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPP 206
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 462 LGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI 521
+G P P + + G+ YL+ + H IK N+LL+E ++D+GL
Sbjct: 100 IGMPE---PDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLA 152
Query: 522 PVMNQESAQELM------IAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFP 569
V + + L+ + Y +PE L+ + DVWS G+++ ++ G+ P
Sbjct: 153 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 462 LGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI 521
+G P P + + G+ YL+ + H IK N+LL+E ++D+GL
Sbjct: 100 IGMPE---PDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLA 152
Query: 522 PVMNQESAQELM------IAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFP 569
V + + L+ + Y +PE L+ + DVWS G+++ ++ G+ P
Sbjct: 153 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 462 LGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI 521
+G P P + + G+ YL+ + H IK N+LL+E ++D+GL
Sbjct: 100 IGMPE---PDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLA 152
Query: 522 PVMNQESAQELM------IAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFP 569
V + + L+ + Y +PE L+ + DVWS G+++ ++ G+ P
Sbjct: 153 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 81/205 (39%), Gaps = 23/205 (11%)
Query: 375 EILGSGCFG----SSYKASLSTGAMMVVKRFKQ---MNNVGREEFQEHMRRLGRLRHPNL 427
E LG G FG + A + VK K ++F + + L H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 428 LPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ L K+ V E P SL L HQ G L SR + VA+G+ YL
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAV--QVAEGMGYL- 127
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM-------IAYKSPE 540
E I H + + N+LL + D+GL+ + Q +M A+ +PE
Sbjct: 128 -ESKRFI--HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 541 FLQLGRITKKTDVWSLGVLILEIMT 565
L+ + +D W GV + E+ T
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 462 LGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI 521
+G P P + + G+ YL+ + H IK N+LL+E ++D+GL
Sbjct: 99 IGMPE---PDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLA 151
Query: 522 PVMNQESAQELM------IAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFP 569
V + + L+ + Y +PE L+ + DVWS G+++ ++ G+ P
Sbjct: 152 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 462 LGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI 521
+G P P + + G+ YL+ + H IK N+LL+E ++D+GL
Sbjct: 100 IGMPE---PDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLA 152
Query: 522 PVMNQESAQELM------IAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFP 569
V + + L+ + Y +PE L+ + DVWS G+++ ++ G+ P
Sbjct: 153 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 462 LGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI 521
+G P P + + G+ YL+ + H IK N+LL+E ++D+GL
Sbjct: 99 IGMPE---PDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLA 151
Query: 522 PVMNQESAQELM------IAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFP 569
V + + L+ + Y +PE L+ + DVWS G+++ ++ G+ P
Sbjct: 152 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 68/170 (40%), Gaps = 14/170 (8%)
Query: 405 NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQ 464
+ V R Q R GRL+ P+++P+ + + + + LA L Q
Sbjct: 74 DPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRR-----Q 128
Query: 465 PSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM 524
L P + IV+ + L + + H +K N+L++ L D+G+
Sbjct: 129 GPLAPPRAVAIVRQIGSALDAAHAAGAT----HRDVKPENILVSADDFAYLVDFGIASAT 184
Query: 525 NQESAQEL-----MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFP 569
E +L + Y +PE T + D+++L ++ E +TG P
Sbjct: 185 TDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPP 234
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 473 LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM----NQES 528
+++V V+ G++YL E + + H + + NVLL ++D+GL + N
Sbjct: 472 IELVHQVSMGMKYL--EESNFV--HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527
Query: 529 AQ---ELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
AQ + + + +PE + + + K+DVWS GVL+ E +
Sbjct: 528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 462 LGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI 521
+G P P + + G+ YL+ + H IK N+LL+E ++D+GL
Sbjct: 100 IGMPE---PDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLA 152
Query: 522 PVMNQESAQELM------IAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFP 569
V + + L+ + Y +PE L+ + DVWS G+++ ++ G+ P
Sbjct: 153 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 462 LGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI 521
+G P P + + G+ YL+ + H IK N+LL+E ++D+GL
Sbjct: 99 IGMPE---PDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLA 151
Query: 522 PVMNQESAQELM------IAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFP 569
V + + L+ + Y +PE L+ + DVWS G+++ ++ G+ P
Sbjct: 152 TVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 473 LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM----NQES 528
+++V V+ G++YL E + + H + + NVLL ++D+GL + N
Sbjct: 108 IELVHQVSMGMKYL--EESNFV--HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 163
Query: 529 AQ---ELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
AQ + + + +PE + + + K+DVWS GVL+ E +
Sbjct: 164 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 473 LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM----NQES 528
+++V V+ G++YL E + + H + + NVLL ++D+GL + N
Sbjct: 128 IELVHQVSMGMKYL--EESNFV--HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 183
Query: 529 AQ---ELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
AQ + + + +PE + + + K+DVWS GVL+ E +
Sbjct: 184 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 40/226 (17%)
Query: 374 AEILGSGCFGSSYKASL------STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLR---H 424
+ LG G FG KA+ + + VK K+ N E ++ + L+ H
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE--NASPSELRDLLSEFNVLKQVNH 85
Query: 425 PNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALG-----------QPSLDWPSRL 473
P+++ L + LL+ E+ SL L + +G SLD P
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 474 KIVKG--------VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMN 525
+ G +++G+QYL + H + + N+L+ E + ++D+GL +
Sbjct: 146 ALTMGDLISFAWQISQGMQYL----AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 526 QE------SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+E S + + + + E L T ++DVWS GVL+ EI+T
Sbjct: 202 EEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 473 LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM----NQES 528
+++V V+ G++YL E + + H + + NVLL ++D+GL + N
Sbjct: 473 IELVHQVSMGMKYL--EESNFV--HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 528
Query: 529 AQ---ELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
AQ + + + +PE + + + K+DVWS GVL+ E +
Sbjct: 529 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 39/222 (17%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMN-----NVGREEFQEHMRRLGRLRHPNL 427
++ILG G + ++ TG + +K F ++ +V EF+ L +L H N+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFE----VLKKLNHKNI 69
Query: 428 LPLVAYY--YRKEEKLLVHEFVPKRSLAVNLH-GHQALGQPSLDWPSRLKIVKGVAKGLQ 484
+ L A K+L+ EF P SL L A G P ++ L +++ V G+
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF---LIVLRDVVGGMN 126
Query: 485 YLYRELPSLIAPHGHIKSSNVL--LNESLEPV--LADYGLIPVMNQESAQELMIAYKSPE 540
+L RE + H +IK N++ + E + V L D+G E ++ + Y + E
Sbjct: 127 HL-RENGIV---HRNIKPGNIMRVIGEDGQSVYKLTDFG--AARELEDDEQFVXLYGTEE 180
Query: 541 FLQ-------------LGRITKKTDVWSLGVLILEIMTGKFP 569
+L + D+WS+GV TG P
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 462 LGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI 521
+G P P + + G+ YL+ + H IK N+LL+E ++D+GL
Sbjct: 100 IGMPE---PDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLA 152
Query: 522 PVMNQESAQELM------IAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFP 569
V + + L+ + Y +PE L+ + DVWS G+++ ++ G+ P
Sbjct: 153 TVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 473 LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM----NQES 528
+++V V+ G++YL E + + H + + NVLL ++D+GL + N
Sbjct: 114 IELVHQVSMGMKYL--EESNFV--HRDLAARNVLLVTQHYAKISDFGLSKALRADENXYK 169
Query: 529 AQ---ELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
AQ + + + +PE + + + K+DVWS GVL+ E +
Sbjct: 170 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 473 LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM----NQES 528
+++V V+ G++YL E + + H + + NVLL ++D+GL + N
Sbjct: 130 IELVHQVSMGMKYL--EESNFV--HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 185
Query: 529 AQ---ELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
AQ + + + +PE + + + K+DVWS GVL+ E +
Sbjct: 186 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 473 LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM----NQES 528
+++V V+ G++YL E + + H + + NVLL ++D+GL + N
Sbjct: 130 IELVHQVSMGMKYL--EESNFV--HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 185
Query: 529 AQ---ELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
AQ + + + +PE + + + K+DVWS GVL+ E +
Sbjct: 186 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 473 LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM----NQES 528
+++V V+ G++YL E + + H + + NVLL ++D+GL + N
Sbjct: 110 IELVHQVSMGMKYL--EESNFV--HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 165
Query: 529 AQ---ELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
AQ + + + +PE + + + K+DVWS GVL+ E +
Sbjct: 166 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI------PVMNQESAQEL 532
VAKG+++L S H + + N+LL+E + D+GL P ++ L
Sbjct: 207 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE + T ++DVWS GVL+ EI +
Sbjct: 263 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNN---VGREEFQEHMRRLGRLRHPNLLPL 430
E +G G +G+ +KA + T ++ +KR + ++ V +E + L L+H N++ L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALRE-ICLLKELKHKNIVRL 66
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYREL 490
+ ++ LV EF + +L + LD + + KGL + +
Sbjct: 67 HDVLHSDKKLTLVFEFCDQ-----DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH--- 118
Query: 491 PSLIAPHGHIKSSNVLLNESLEPVLADYGL-----IPVMNQESAQELMIAYKSPEFLQLG 545
S H +K N+L+N + E LA++GL IPV SA+ + + Y+ P+ L
Sbjct: 119 -SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV-RCYSAEVVTLWYRPPDVLFGA 176
Query: 546 RI-TKKTDVWSLGVLILEIMTGK---FPAN 571
++ + D+WS G + E+ FP N
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAGRPLFPGN 206
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI------PVMNQESAQEL 532
VAKG+++L S H + + N+LL+E + D+GL P ++ L
Sbjct: 209 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE + T ++DVWS GVL+ EI +
Sbjct: 265 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 473 LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM----NQES 528
+++V V+ G++YL E + + H + + NVLL ++D+GL + N
Sbjct: 114 IELVHQVSMGMKYL--EESNFV--HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 169
Query: 529 AQ---ELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
AQ + + + +PE + + + K+DVWS GVL+ E +
Sbjct: 170 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI------PVMNQESAQEL 532
VAKG+++L S H + + N+LL+E + D+GL P ++ L
Sbjct: 200 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE + T ++DVWS GVL+ EI +
Sbjct: 256 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 473 LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM----NQES 528
+++V V+ G++YL E + + H + + NVLL ++D+GL + N
Sbjct: 120 IELVHQVSMGMKYL--EESNFV--HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 175
Query: 529 AQ---ELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
AQ + + + +PE + + + K+DVWS GVL+ E +
Sbjct: 176 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI------PVMNQESAQEL 532
VAKG+++L S H + + N+LL+E + D+GL P ++ L
Sbjct: 202 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE + T ++DVWS GVL+ EI +
Sbjct: 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI------PVMNQESAQEL 532
VAKG+++L S H + + N+LL+E + D+GL P ++ L
Sbjct: 148 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE + T ++DVWS GVL+ EI +
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 18/205 (8%)
Query: 376 ILGSGCFG----SSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+LG G FG + K + A+ ++K+ + + E R L L P L +
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 432 AYYYRKEEKL-LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYREL 490
++ ++L V E+V L ++ Q +G+ P + ++ GL +L++
Sbjct: 86 HSCFQTVDRLYFVMEYVNGGDLMYHI---QQVGK--FKEPQAVFYAAEISIGLFFLHKR- 139
Query: 491 PSLIAPHGHIKSSNVLLNESLEPVLADYGLIP--VMNQESAQELMIA--YKSPEFLQLGR 546
+I + +K NV+L+ +AD+G+ +M+ + +E Y +PE +
Sbjct: 140 -GII--YRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQP 196
Query: 547 ITKKTDVWSLGVLILEIMTGKFPAN 571
K D W+ GVL+ E++ G+ P +
Sbjct: 197 YGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 65 ILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRK 124
+ L + L L RN L G P+ + G ++ + L N+ EI F G+ L+
Sbjct: 49 LFGRLPHLVKLELKRNQLTGIEPNAFE-GASHIQELQLGENKIK-EISNKMFLGLHQLKT 106
Query: 125 LLLADNQFNGPIPESLTRLSRLVELRLEGNKF 156
L L DNQ + +P S L+ L L L N F
Sbjct: 107 LNLYDNQISCVMPGSFEHLNSLTSLNLASNPF 138
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI------PVMNQESAQEL 532
VAKG+++L S H + + N+LL+E + D+GL P ++ L
Sbjct: 148 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE + T ++DVWS GVL+ EI +
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 20/203 (9%)
Query: 377 LGSGCFGSSY----KASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LGSG +G K + + A+ ++K+ + + L +L HPN++ L
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
++ K LV E L + Q + I+K V G YL++ +
Sbjct: 89 FFEDKRNYYLVMEVYRGGELFDEIILRQKFSE-----VDAAVIMKQVLSGTTYLHKH--N 141
Query: 493 LIAPHGHIKSSNVLLNESLEPVL---ADYGL---IPVMNQESAQELMIAYKSPEFLQLGR 546
++ H +K N+LL L D+GL V + + Y +PE L+ +
Sbjct: 142 IV--HRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLR-KK 198
Query: 547 ITKKTDVWSLGVLILEIMTGKFP 569
+K DVWS GV++ ++ G P
Sbjct: 199 YDEKCDVWSCGVILYILLCGYPP 221
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI------PVMNQESAQEL 532
VAKG+++L S H + + N+LL+E + D+GL P ++ L
Sbjct: 148 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE + T ++DVWS GVL+ EI +
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI------PVMNQESAQEL 532
VAKG+++L S H + + N+LL+E + D+GL P ++ L
Sbjct: 159 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 214
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE + T ++DVWS GVL+ EI +
Sbjct: 215 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 98/246 (39%), Gaps = 29/246 (11%)
Query: 365 DLHDLLRASAEI---LGSGCFGSSYKASLS------TGAMMVVKRFKQMNNVGRE-EFQE 414
DL ++ R + + LG G FG Y+ +S + + VK ++ + E +F
Sbjct: 41 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 100
Query: 415 HMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQA-LGQPS-LDWPSR 472
+ + H N++ + + + ++ E + L L + QPS L
Sbjct: 101 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 160
Query: 473 LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN---ESLEPVLADYGLI------PV 523
L + + +A G QYL E I H I + N LL + D+G+
Sbjct: 161 LHVARDIACGCQYL--EENHFI--HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGY 216
Query: 524 MNQESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDL 583
+ L + + PE G T KTD WS GVL+ EI F ++ K++ ++
Sbjct: 217 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI----FSLGYMPYPSKSNQEV 272
Query: 584 ASWVNS 589
+V S
Sbjct: 273 LEFVTS 278
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI------PVMNQESAQEL 532
VAKG+++L S H + + N+LL+E + D+GL P ++ L
Sbjct: 148 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE + T ++DVWS GVL+ EI +
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI------PVMNQESAQEL 532
VAKG+++L S H + + N+LL+E + D+GL P ++ L
Sbjct: 157 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 212
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE + T ++DVWS GVL+ EI +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI------PVMNQESAQEL 532
VAKG+++L S H + + N+LL+E + D+GL P ++ L
Sbjct: 157 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE + T ++DVWS GVL+ EI +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI------PVMNQESAQEL 532
VAKG+++L S H + + N+LL+E + D+GL P ++ L
Sbjct: 194 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 249
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE + T ++DVWS GVL+ EI +
Sbjct: 250 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI------PVMNQESAQEL 532
VAKG+++L S H + + N+LL+E + D+GL P ++ L
Sbjct: 157 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARL 212
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE + T ++DVWS GVL+ EI +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI------PVMNQESAQEL 532
VAKG+++L S H + + N+LL+E + D+GL P ++ L
Sbjct: 157 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE + T ++DVWS GVL+ EI +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 98/246 (39%), Gaps = 29/246 (11%)
Query: 365 DLHDLLRASAEI---LGSGCFGSSYKASLS------TGAMMVVKRFKQMNNVGRE-EFQE 414
DL ++ R + + LG G FG Y+ +S + + VK ++ + E +F
Sbjct: 64 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 123
Query: 415 HMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQA-LGQPS-LDWPSR 472
+ + H N++ + + + ++ E + L L + QPS L
Sbjct: 124 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 183
Query: 473 LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN---ESLEPVLADYGLI------PV 523
L + + +A G QYL E I H I + N LL + D+G+
Sbjct: 184 LHVARDIACGCQYL--EENHFI--HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGY 239
Query: 524 MNQESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDL 583
+ L + + PE G T KTD WS GVL+ EI F ++ K++ ++
Sbjct: 240 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI----FSLGYMPYPSKSNQEV 295
Query: 584 ASWVNS 589
+V S
Sbjct: 296 LEFVTS 301
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 27/207 (13%)
Query: 374 AEILGSGCFGSSYKA-------SLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPN 426
++LGSG FG+ YK ++ + V R +E E G + P
Sbjct: 22 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAG-VGSPY 80
Query: 427 LLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQA-LG-QPSLDWPSRLKIVKGVAKGLQ 484
+ L+ +L V + +P L ++ ++ LG Q L+W + +AKG+
Sbjct: 81 VSRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQ------IAKGMS 133
Query: 485 YLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQ------ELMIAYKS 538
YL E L+ H + + NVL+ + D+GL +++ + + ++ I + +
Sbjct: 134 YL--EDVRLV--HRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMA 189
Query: 539 PEFLQLGRITKKTDVWSLGVLILEIMT 565
E + R T ++DVWS GV + E+MT
Sbjct: 190 LESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI------PVMNQESAQEL 532
VA+G+++L S H + + N+LL+E+ + D+GL P ++ L
Sbjct: 208 VARGMEFL----SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL 263
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE + + K+DVWS GVL+ EI +
Sbjct: 264 PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 20/209 (9%)
Query: 375 EILGSGCFGSSYK-ASLSTGAMMVVKRFKQ-MNNVGREEFQEHMRRLGRLRHPNLLPL-- 430
E LG+G FG + TG + +K+ +Q ++ RE + ++ + +L HPN++
Sbjct: 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 431 ----VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
+ + LL E+ L L+ + + P R ++ ++ L+YL
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLK-EGPIR-TLLSDISSALRYL 137
Query: 487 YRELPSLIAPHGHIKSSNVLLN---ESLEPVLADYGLIPVMNQ-ESAQELM--IAYKSPE 540
+ +I H +K N++L + L + D G ++Q E E + + Y +PE
Sbjct: 138 HEN--RII--HRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPE 193
Query: 541 FLQLGRITKKTDVWSLGVLILEIMTGKFP 569
L+ + T D WS G L E +TG P
Sbjct: 194 LLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 20/209 (9%)
Query: 375 EILGSGCFGSSYK-ASLSTGAMMVVKRFKQ-MNNVGREEFQEHMRRLGRLRHPNLLPL-- 430
E LG+G FG + TG + +K+ +Q ++ RE + ++ + +L HPN++
Sbjct: 21 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 431 ----VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL 486
+ + LL E+ L L+ + + P R ++ ++ L+YL
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLK-EGPIR-TLLSDISSALRYL 138
Query: 487 YRELPSLIAPHGHIKSSNVLLN---ESLEPVLADYGLIPVMNQ-ESAQELM--IAYKSPE 540
+ +I H +K N++L + L + D G ++Q E E + + Y +PE
Sbjct: 139 HEN--RII--HRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPE 194
Query: 541 FLQLGRITKKTDVWSLGVLILEIMTGKFP 569
L+ + T D WS G L E +TG P
Sbjct: 195 LLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI------PVMNQESAQEL 532
VAKG+++L S H + + N+LL+E + D+GL P ++ L
Sbjct: 153 VAKGMEFL----ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE + T ++DVWS GVL+ EI +
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI------PVMNQESAQEL 532
VAKG+++L S H + + N+LL+E + D+GL P ++ L
Sbjct: 157 VAKGMEFL----ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE + T ++DVWS GVL+ EI +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 103/234 (44%), Gaps = 31/234 (13%)
Query: 368 DLLRASAEILGSGCFGSSYKASLSTGAMMV---VKRFKQ-MNNVGREEFQEHMRRLGRLR 423
+LL A E LG G FGS + + +K KQ EE + + +L
Sbjct: 10 NLLIADIE-LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD 68
Query: 424 HPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGL 483
+P ++ L+ + E +LV E L L G + + + +++ V+ G+
Sbjct: 69 NPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKRE----EIPVSNVAELLHQVSMGM 123
Query: 484 QYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE-------SAQELMIAY 536
+YL E + + H + + NVLL ++D+GL + + SA + + +
Sbjct: 124 KYL--EEKNFV--HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKW 179
Query: 537 KSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPAN---------FLQQGKKAD 580
+PE + + + ++DVWS GV + E ++ G+ P F++QGK+ +
Sbjct: 180 YAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRME 233
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 24/203 (11%)
Query: 377 LGSGCFGSSY----KASLSTGAMMVVK-----RFKQMNNVGREEFQEHMRRLGRLRHPNL 427
LG+G FG + + + AM V+K R KQ+ + E L + HP +
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLM-----LSIVTHPFI 68
Query: 428 LPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY 487
+ + + ++ ++ +++ L L Q P + V L+YL+
Sbjct: 69 IRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-----YAAEVCLALEYLH 123
Query: 488 RELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGR 546
+ +I + +K N+LL+++ + D+G + + Y +PE +
Sbjct: 124 SK--DII--YRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKP 179
Query: 547 ITKKTDVWSLGVLILEIMTGKFP 569
K D WS G+LI E++ G P
Sbjct: 180 YNKSIDWWSFGILIYEMLAGYTP 202
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 31/234 (13%)
Query: 368 DLLRASAEILGSGCFGSSYKASLSTGAMMV---VKRFKQ-MNNVGREEFQEHMRRLGRLR 423
+LL A E LG G FGS + + +K KQ EE + + +L
Sbjct: 336 NLLIADIE-LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD 394
Query: 424 HPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGL 483
+P ++ L+ + E +LV E L L G + + + +++ V+ G+
Sbjct: 395 NPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKRE----EIPVSNVAELLHQVSMGM 449
Query: 484 QYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE-------SAQELMIAY 536
+YL E + + H ++ + NVLL ++D+GL + + SA + + +
Sbjct: 450 KYL--EEKNFV--HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKW 505
Query: 537 KSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPAN---------FLQQGKKAD 580
+PE + + + ++DVWS GV + E ++ G+ P F++QGK+ +
Sbjct: 506 YAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRME 559
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 88/214 (41%), Gaps = 27/214 (12%)
Query: 375 EILGSGCFGSSYKASL------STGAMMVVKRFKQMNNVG-REEFQEHMRRLGRL-RHPN 426
+ LG+G FG +A+ + VK K + +E ++ + L +H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 427 LLPLVAYYYRKEEKLLVHE---------FVPKRSLAVNLHGHQALGQPSLDWPSRLKIVK 477
++ L+ L++ E F+ ++S + A+ +L L
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSS 171
Query: 478 GVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI-PVMNQESA-----QE 531
VA+G+ +L S H + + NVLL + D+GL +MN +
Sbjct: 172 QVAQGMAFL----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
Query: 532 LMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
L + + +PE + T ++DVWS G+L+ EI +
Sbjct: 228 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 58/104 (55%), Gaps = 12/104 (11%)
Query: 473 LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPV----LADYGLIPVMNQES 528
++++K + +G+ YL++ +++ H +K N+LL+ S+ P+ + D+G+ +
Sbjct: 134 IRLIKQILEGVYYLHQN--NIV--HLDLKPQNILLS-SIYPLGDIKIVDFGMSRKIGHAC 188
Query: 529 A-QELMIA--YKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFP 569
+E+M Y +PE L IT TD+W++G++ ++T P
Sbjct: 189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 95/234 (40%), Gaps = 24/234 (10%)
Query: 368 DLLRASAEILGSGCFGSSYKASLSTG----AMMVVKR--FKQMNNVGREEFQEHMRRLGR 421
DLLR ++G G + L AM VVK+ ++ + ++H+
Sbjct: 55 DLLR----VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS 110
Query: 422 LRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAK 481
HP L+ L + + + V E+V L ++ + L + + S ++
Sbjct: 111 -NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS-----AEISL 164
Query: 482 GLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL----IPVMNQESAQELMIAYK 537
L YL+ +I + +K NVLL+ L DYG+ + + S Y
Sbjct: 165 ALNYLHER--GII--YRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYI 220
Query: 538 SPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVL 591
+PE L+ D W+LGVL+ E+M G+ P + + D + ++ V+
Sbjct: 221 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 274
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 93/234 (39%), Gaps = 24/234 (10%)
Query: 368 DLLRASAEILGSGCFGSSYKASLSTG----AMMVVKR--FKQMNNVGREEFQEHMRRLGR 421
DLLR ++G G + L AM VVK+ ++ + ++H+
Sbjct: 23 DLLR----VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 78
Query: 422 LRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAK 481
HP L+ L + + + V E+V L ++ + L + + S ++
Sbjct: 79 -NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS-----AEISL 132
Query: 482 GLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YK 537
L YL+ +I + +K NVLL+ L DYG+ + Y
Sbjct: 133 ALNYLHER--GII--YRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYI 188
Query: 538 SPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVL 591
+PE L+ D W+LGVL+ E+M G+ P + + D + ++ V+
Sbjct: 189 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 242
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 20/127 (15%)
Query: 445 EFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSN 504
EFVP + L + + L S VAKG+++L S H + + N
Sbjct: 129 EFVPYKDLYKDFLTLEHLIXYSFQ----------VAKGMEFL----ASRKXIHRDLAARN 174
Query: 505 VLLNESLEPVLADYGLI------PVMNQESAQELMIAYKSPEFLQLGRITKKTDVWSLGV 558
+LL+E + D+GL P ++ L + + +PE + T ++DVWS GV
Sbjct: 175 ILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 234
Query: 559 LILEIMT 565
L+ EI +
Sbjct: 235 LLWEIFS 241
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 83/205 (40%), Gaps = 21/205 (10%)
Query: 375 EILGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREE-FQEHMRRLGRLRHPNLLPLVA 432
E LG+G F A +TG + VK + G+E + + L +++H N++ L
Sbjct: 28 ETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALED 87
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNL--HGHQALGQPSLDWPSRLKIVKGVAKGLQYLYREL 490
Y LV + V L + G S +++ V + YL+R
Sbjct: 88 IYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAST-------LIRQVLDAVYYLHR-- 138
Query: 491 PSLIAPHGHIKSSNVLL---NESLEPVLADYGLIPVMNQESAQELMIA---YKSPEFLQL 544
+ H +K N+L +E + +++D+GL + + Y +PE L
Sbjct: 139 --MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQ 196
Query: 545 GRITKKTDVWSLGVLILEIMTGKFP 569
+K D WS+GV+ ++ G P
Sbjct: 197 KPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 39/222 (17%)
Query: 374 AEILGSGCFGSSYKA-SLSTGAMMVVKRFKQMN-----NVGREEFQEHMRRLGRLRHPNL 427
++ILG G + ++ TG + +K F ++ +V EF+ L +L H N+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFE----VLKKLNHKNI 69
Query: 428 LPLVAYY--YRKEEKLLVHEFVPKRSLAVNLH-GHQALGQPSLDWPSRLKIVKGVAKGLQ 484
+ L A K+L+ EF P SL L A G P ++ L +++ V G+
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF---LIVLRDVVGGMN 126
Query: 485 YLYRELPSLIAPHGHIKSSNVL--LNESLEPV--LADYGLIPVMNQESAQELMIAYKSPE 540
+L RE + H +IK N++ + E + V L D+G E ++ + Y + E
Sbjct: 127 HL-RENGIV---HRNIKPGNIMRVIGEDGQSVYKLTDFG--AARELEDDEQFVSLYGTEE 180
Query: 541 FLQ-------------LGRITKKTDVWSLGVLILEIMTGKFP 569
+L + D+WS+GV TG P
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 84/205 (40%), Gaps = 23/205 (11%)
Query: 375 EILGSGCFGSSY--KASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
E+LGSG F + K L TG + +K K+ + + L +++H N++ L
Sbjct: 15 EVLGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLED 73
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNL--HGHQALGQPSLDWPSRLKIVKGVAKGLQYLYREL 490
Y LV + V L + G SL +++ V ++YL+
Sbjct: 74 IYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL-------VIQQVLSAVKYLHEN- 125
Query: 491 PSLIAPHGHIKSSNVLL---NESLEPVLADYGLIPVMNQESAQELMIA---YKSPEFLQL 544
++ H +K N+L E+ + ++ D+GL M Q Y +PE L
Sbjct: 126 -GIV--HRDLKPENLLYLTPEENSKIMITDFGL-SKMEQNGIMSTACGTPGYVAPEVLAQ 181
Query: 545 GRITKKTDVWSLGVLILEIMTGKFP 569
+K D WS+GV+ ++ G P
Sbjct: 182 KPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 23/225 (10%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
++LG+G F A T ++ +K + G+E + + L +++HPN++ L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y L+ + V L + + SRL + V ++YL+
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD---ASRL--IFQVLDAVKYLH----D 134
Query: 493 LIAPHGHIKSSNVL---LNESLEPVLADYGLIPVMNQESAQELMIA---YKSPEFLQLGR 546
L H +K N+L L+E + +++D+GL + + S Y +PE L
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 547 ITKKTDVWSLGVLILEIMTGKFP------ANFLQQGKKADGDLAS 585
+K D WS+GV+ ++ G P A +Q KA+ + S
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS 239
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 62 DITILKELREMRTLSLMRNNLEG-PMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMT 120
DI+ LKEL + L L N L+ P +L N L+ + L N+ +P FD +T
Sbjct: 77 DISALKELTNLTYLILTGNQLQSLPNGVFDKLTN--LKELVLVENQLQS-LPDGVFDKLT 133
Query: 121 SLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEG 158
+L L LA NQ +L+ L EL L N+ +
Sbjct: 134 NLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS 171
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 57/101 (56%), Gaps = 9/101 (8%)
Query: 65 ILKELREMRTLSLMRNNLEGPMPD--LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSL 122
+ +L ++ L L+ N L+ +PD +L N L + L++N+ +P FD +T+L
Sbjct: 104 VFDKLTNLKELVLVENQLQS-LPDGVFDKLTN--LTYLNLAHNQLQS-LPKGVFDKLTNL 159
Query: 123 RKLLLADNQFNGPIPESL-TRLSRLVELRLEGNKFEGQIPD 162
+L L+ NQ +PE + +L++L +LRL N+ + +PD
Sbjct: 160 TELDLSYNQLQS-LPEGVFDKLTQLKDLRLYQNQLKS-VPD 198
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 66 LKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKL 125
++ L +R L+L N L + L++L N L + L+ N+ +P FD +T+L++L
Sbjct: 59 IQYLPNVRYLALGGNKLHD-ISALKELTN--LTYLILTGNQLQS-LPNGVFDKLTNLKEL 114
Query: 126 LLADNQFNGPIPESLTRLSRLVELRLEGNKFEG 158
+L +NQ +L+ L L L N+ +
Sbjct: 115 VLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQS 147
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 65 ILKELREMRTLSLMRNNLEG-PMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLR 123
+ +L + L+L N L+ P +L N L + LS N+ +P FD +T L+
Sbjct: 128 VFDKLTNLTYLNLAHNQLQSLPKGVFDKLTN--LTELDLSYNQLQS-LPEGVFDKLTQLK 184
Query: 124 KLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIP 161
L L NQ RL+ L + L N ++ P
Sbjct: 185 DLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 93/234 (39%), Gaps = 24/234 (10%)
Query: 368 DLLRASAEILGSGCFGSSYKASLSTG----AMMVVKR--FKQMNNVGREEFQEHMRRLGR 421
DLLR ++G G + L AM VVK+ ++ + ++H+
Sbjct: 12 DLLR----VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 67
Query: 422 LRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAK 481
HP L+ L + + + V E+V L ++ + L + + S ++
Sbjct: 68 -NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS-----AEISL 121
Query: 482 GLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YK 537
L YL+ +I + +K NVLL+ L DYG+ + Y
Sbjct: 122 ALNYLHER--GII--YRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYI 177
Query: 538 SPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVL 591
+PE L+ D W+LGVL+ E+M G+ P + + D + ++ V+
Sbjct: 178 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 231
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 410 EEFQEHMRRLGRLR-----HPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQ 464
EE +E RR + HP+++ L+ Y LV + + K L L AL +
Sbjct: 140 EEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSE 199
Query: 465 PSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM 524
I++ + + + +L+ +++ H +K N+LL+++++ L+D+G +
Sbjct: 200 KETR-----SIMRSLLEAVSFLHAN--NIV--HRDLKPENILLDDNMQIRLSDFGFSCHL 250
Query: 525 NQ-ESAQEL--MIAYKSPEFLQLGR------ITKKTDVWSLGVLILEIMTGKFP 569
E +EL Y +PE L+ K+ D+W+ GV++ ++ G P
Sbjct: 251 EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 58/112 (51%), Gaps = 14/112 (12%)
Query: 465 PSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN-ESLEPVLADYGLIPV 523
P L+ +RL + + + +GL+Y++ S H +K +N+ +N E L + D+GL +
Sbjct: 116 PLLEEHARLFMYQ-LLRGLKYIH----SANVLHRDLKPANLFINTEDLVLKIGDFGLARI 170
Query: 524 MNQESAQELMIA-------YKSPEFL-QLGRITKKTDVWSLGVLILEIMTGK 567
M+ + + ++ Y+SP L TK D+W+ G + E++TGK
Sbjct: 171 MDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 13/184 (7%)
Query: 393 GAMMVVKRFKQMNNVGRE--EFQEHMRRLGRLRHPNLLPLVAYYYRK--EEKLLVHEFVP 448
G +VVK K + R+ +F E RL HPN+LP++ L+ + P
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXP 92
Query: 449 KRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN 508
SL LH +D +K A+G +L+ P + P + S +V ++
Sbjct: 93 YGSLYNVLHEGTNF---VVDQSQAVKFALDXARGXAFLHTLEP--LIPRHALNSRSVXID 147
Query: 509 ESLEPVLADYGLIPVMNQESAQELMIAYKSPEFLQL---GRITKKTDVWSLGVLILEIMT 565
E ++ + Q + A+ +PE LQ + D WS VL+ E++T
Sbjct: 148 EDXTARISXAD-VKFSFQSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVT 206
Query: 566 GKFP 569
+ P
Sbjct: 207 REVP 210
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM-------NQESAQELMIAYKSPEFLQLGRITK 549
H +K +N+L++ + + D+G+ + Q +A Y SPE + +
Sbjct: 139 HRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDA 198
Query: 550 KTDVWSLGVLILEIMTGKFP 569
++DV+SLG ++ E++TG+ P
Sbjct: 199 RSDVYSLGCVLYEVLTGEPP 218
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 23/225 (10%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
++LG+G F A T ++ +K + G+E + + L +++HPN++ L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y L+ + V L + + SRL + V ++YL+
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD---ASRL--IFQVLDAVKYLH----D 134
Query: 493 LIAPHGHIKSSNVL---LNESLEPVLADYGLIPVMNQESAQELMIA---YKSPEFLQLGR 546
L H +K N+L L+E + +++D+GL + + S Y +PE L
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 547 ITKKTDVWSLGVLILEIMTGKFP------ANFLQQGKKADGDLAS 585
+K D WS+GV+ ++ G P A +Q KA+ + S
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS 239
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 93/234 (39%), Gaps = 24/234 (10%)
Query: 368 DLLRASAEILGSGCFGSSYKASLSTG----AMMVVKR--FKQMNNVGREEFQEHMRRLGR 421
DLLR ++G G + L AM VVK+ ++ + ++H+
Sbjct: 8 DLLR----VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 422 LRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAK 481
HP L+ L + + + V E+V L ++ + L + + S ++
Sbjct: 64 -NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS-----AEISL 117
Query: 482 GLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YK 537
L YL+ +I + +K NVLL+ L DYG+ + Y
Sbjct: 118 ALNYLHER--GII--YRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYI 173
Query: 538 SPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVL 591
+PE L+ D W+LGVL+ E+M G+ P + + D + ++ V+
Sbjct: 174 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 227
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 23/225 (10%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
++LG+G F A T ++ +K + G+E + + L +++HPN++ L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y L+ + V L + + SRL + V ++YL+
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD---ASRL--IFQVLDAVKYLH----D 134
Query: 493 LIAPHGHIKSSNVL---LNESLEPVLADYGLIPVMNQESAQELMIA---YKSPEFLQLGR 546
L H +K N+L L+E + +++D+GL + + S Y +PE L
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 547 ITKKTDVWSLGVLILEIMTGKFP------ANFLQQGKKADGDLAS 585
+K D WS+GV+ ++ G P A +Q KA+ + S
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS 239
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 23/225 (10%)
Query: 375 EILGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGRE-EFQEHMRRLGRLRHPNLLPLVA 432
++LG+G F A T ++ +K + G+E + + L +++HPN++ L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPS 492
Y L+ + V L + + SRL + V ++YL+
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD---ASRL--IFQVLDAVKYLH----D 134
Query: 493 LIAPHGHIKSSNVL---LNESLEPVLADYGLIPVMNQESAQELMIA---YKSPEFLQLGR 546
L H +K N+L L+E + +++D+GL + + S Y +PE L
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 547 ITKKTDVWSLGVLILEIMTGKFP------ANFLQQGKKADGDLAS 585
+K D WS+GV+ ++ G P A +Q KA+ + S
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS 239
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 474 KIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN-----ESLEPV-LADYGLIPVMNQE 527
+I K + GL Y++R + H IK NVL+ E+L + +AD G ++
Sbjct: 135 QISKQLLLGLDYMHRRCGII---HTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 191
Query: 528 SAQELMI-AYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKF 568
+ Y+SPE L D+WS LI E++TG F
Sbjct: 192 YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDF 233
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 474 KIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN-----ESLEPV-LADYGLIPVMNQE 527
+I K + GL Y++R + H IK NVL+ E+L + +AD G ++
Sbjct: 135 QISKQLLLGLDYMHRRCGII---HTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 191
Query: 528 SAQELMI-AYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKF 568
+ Y+SPE L D+WS LI E++TG F
Sbjct: 192 YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDF 233
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 82/205 (40%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K + + AM ++ + K + E R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+VP + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 168 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 82/205 (40%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K + + AM ++ + K + E R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+VP + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 168 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 37/210 (17%)
Query: 377 LGSGCFGSSYKASL--------STGAMMVVKRFK-QMNNVGREEFQEHMRRLGRLRHPNL 427
LG G FG K SL TG M+ VK K R +++ + L L H ++
Sbjct: 39 LGEGHFG---KVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI 95
Query: 428 LPLVAYYYRKEEK-----LLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKG 482
+ Y E+ LV E+VP SL L H S+ L + + +G
Sbjct: 96 ---IKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH------SIGLAQLLLFAQQICEG 146
Query: 483 LQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELM-------IA 535
+ YL+ + H + + NVLL+ + D+GL + + + +
Sbjct: 147 MAYLHAQH----YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVF 202
Query: 536 YKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ +PE L+ + +DVWS GV + E++T
Sbjct: 203 WYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 27/207 (13%)
Query: 375 EILGSG----CFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL 430
E +G G C +KA+ A+ V+ + K+ E E + R G+ HPN++ L
Sbjct: 33 ETIGVGSYSECKRCVHKATNMEYAVKVIDKSKR----DPSEEIEILLRYGQ--HPNIITL 86
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYREL 490
Y + LV E + L + + + + ++ + K ++YL+
Sbjct: 87 KDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKTVEYLH--- 138
Query: 491 PSLIAPHGHIKSSNVL-LNESLEPV---LADYGLIPVMNQESAQELMIAYKS----PEFL 542
S H +K SN+L ++ES P + D+G + E+ + Y + PE L
Sbjct: 139 -SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL 197
Query: 543 QLGRITKKTDVWSLGVLILEIMTGKFP 569
+ + D+WSLG+L+ ++ G P
Sbjct: 198 KRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVL-LNESLEPV---LADYGLIPVMNQESAQELMI 534
+ K ++YL+ + H +K SN+L ++ES P + D+G + E+ +
Sbjct: 125 ITKTVEYLHAQG----VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTP 180
Query: 535 AYKS----PEFLQLGRITKKTDVWSLGVLILEIMTGKFP 569
Y + PE L+ D+WSLGVL+ ++TG P
Sbjct: 181 CYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA---YKSPEFLQLGRITKKTDV 553
H +K +N+ L L D+GL+ + A E+ Y +PE LQ G DV
Sbjct: 180 HLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQ-GSYGTAADV 238
Query: 554 WSLGVLILEI 563
+SLG+ ILE+
Sbjct: 239 FSLGLTILEV 248
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Query: 50 LKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSG 109
L+LE LQ ++ + +L ++ LSL +N ++ +PD L +YL N+
Sbjct: 33 LELESNKLQ-SLPHGVFDKLTQLTKLSLSQNQIQS-LPDGVFDKLTKLTILYLHENKLQS 90
Query: 110 EIPTDAFDGMTSLRKLLLADNQFNGPIPESL-TRLSRLVELRLEGNKFEGQIP 161
+P FD +T L++L L NQ +P+ + RL+ L ++ L N ++ P
Sbjct: 91 -LPNGVFDKLTQLKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 141
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 82/205 (40%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K + + AM ++ + K + E R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+VP + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 168 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 82/205 (40%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K + + AM ++ + K + E R L + P L+ L
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+VP + +L +P + +++ + L +YR+L
Sbjct: 130 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 188
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 189 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 239
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 240 VDWWALGVLIYEMAAG-YPPFFADQ 263
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 474 KIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPV---LADYGLIPVMNQESAQ 530
+I++ + +Q+L+ S H +K N+L + L D+G Q + Q
Sbjct: 113 EIMRDIGTAIQFLH----SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQ 168
Query: 531 ELMIA--YKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGK 577
Y +PE L + K D+WSLGV++ ++ G FP + G+
Sbjct: 169 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-FPPFYSNTGQ 216
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM-------NQESAQELMIAYKSPEFLQLGRITK 549
H +K +N++++ + + D+G+ + Q +A Y SPE + +
Sbjct: 139 HRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDA 198
Query: 550 KTDVWSLGVLILEIMTGKFP 569
++DV+SLG ++ E++TG+ P
Sbjct: 199 RSDVYSLGCVLYEVLTGEPP 218
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 51 KLEDMGLQGN--IDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFS 108
KL D+ + N DIT L L + L+L N + P L+ L N L + LS+N S
Sbjct: 86 KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDP-LKNLTN--LNRLELSSNTIS 142
Query: 109 GEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQQKDL 168
A G+TSL++L + NQ P L L+ L L + NK + +L
Sbjct: 143 D---ISALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNL 197
Query: 169 VSFNVSNNALFGSISP--ALRELDPSSFSGNR 198
S +NN + I+P L LD S +GN+
Sbjct: 198 ESLIATNNQI-SDITPLGILTNLDELSLNGNQ 228
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 27/207 (13%)
Query: 375 EILGSG----CFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL 430
E +G G C +KA+ A+ V+ + K+ E E + R G+ HPN++ L
Sbjct: 33 ETIGVGSYSECKRCVHKATNMEYAVKVIDKSKR----DPSEEIEILLRYGQ--HPNIITL 86
Query: 431 VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYREL 490
Y + LV E + L + + + + ++ + K ++YL+
Sbjct: 87 KDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKTVEYLH--- 138
Query: 491 PSLIAPHGHIKSSNVL-LNESLEPV---LADYGLIPVMNQESAQELMIAYKS----PEFL 542
S H +K SN+L ++ES P + D+G + E+ + Y + PE L
Sbjct: 139 -SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL 197
Query: 543 QLGRITKKTDVWSLGVLILEIMTGKFP 569
+ + D+WSLG+L+ ++ G P
Sbjct: 198 KRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 82/205 (40%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPLVA 432
+G+G FG + TG +K + V ++ + + R L + P L+ L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+VP + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ +AD+G + + Y +PE + K
Sbjct: 168 ---------KPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 82/205 (40%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K + + AM ++ + K + E R L + P L+ L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+VP + +L +P + +++ + L +YR+L
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 168
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 169 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 220 VDWWALGVLIYEMAAG-YPPFFADQ 243
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 82/205 (40%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K + + AM ++ + K + E R L + P L+ L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+VP + +L +P + +++ + L +YR+L
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 168
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 169 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 220 VDWWALGVLIYEMAAG-YPPFFADQ 243
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM-------NQESAQELMIAYKSPEFLQLGRITK 549
H +K +N++++ + + D+G+ + Q +A Y SPE + +
Sbjct: 139 HRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDA 198
Query: 550 KTDVWSLGVLILEIMTGKFP 569
++DV+SLG ++ E++TG+ P
Sbjct: 199 RSDVYSLGCVLYEVLTGEPP 218
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 82/205 (40%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K + + AM ++ + K + E R L + P L+ L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+VP + +L +P + +++ + L +YR+L
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 160
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 161 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 211
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 212 VDWWALGVLIYEMAAG-YPPFFADQ 235
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 51 KLEDMGLQGN--IDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFS 108
KL D+ + N DIT L L + L+L N + P L+ L N L + LS+N S
Sbjct: 86 KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDP-LKNLTN--LNRLELSSNTIS 142
Query: 109 GEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQQKDL 168
A G+TSL++L + NQ P L L+ L L + NK + +L
Sbjct: 143 D---ISALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNL 197
Query: 169 VSFNVSNNALFGSISP--ALRELDPSSFSGNR 198
S +NN + I+P L LD S +GN+
Sbjct: 198 ESLIATNNQI-SDITPLGILTNLDELSLNGNQ 228
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 82/205 (40%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K + + AM ++ + K + E R L + P L+ L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+VP + +L +P + +++ + L +YR+L
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 168
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 169 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 220 VDWWALGVLIYEMAAG-YPPFFADQ 243
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM-------NQESAQELMIAYKSPEFLQLGRITK 549
H +K +N++++ + + D+G+ + Q +A Y SPE + +
Sbjct: 139 HRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDA 198
Query: 550 KTDVWSLGVLILEIMTGKFP 569
++DV+SLG ++ E++TG+ P
Sbjct: 199 RSDVYSLGCVLYEVLTGEPP 218
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 87/214 (40%), Gaps = 27/214 (12%)
Query: 375 EILGSGCFGSSYKASL------STGAMMVVKRFKQMNNVG-REEFQEHMRRLGRL-RHPN 426
+ LG+G FG +A+ + VK K + +E ++ + L +H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 427 LLPLVAYYYRKEEKLLVHE---------FVPKRSLAVNLHGHQALGQPSLDWPSRLKIVK 477
++ L+ L++ E F+ ++S + A+ + L
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSS 171
Query: 478 GVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI-PVMNQESA-----QE 531
VA+G+ +L S H + + NVLL + D+GL +MN +
Sbjct: 172 QVAQGMAFL----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
Query: 532 LMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
L + + +PE + T ++DVWS G+L+ EI +
Sbjct: 228 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 474 KIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPV---LADYGLIPVMNQESAQ 530
+I++ + +Q+L+ S H +K N+L + L D+G Q + Q
Sbjct: 132 EIMRDIGTAIQFLH----SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQ 187
Query: 531 ELMIA--YKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGK 577
Y +PE L + K D+WSLGV++ ++ G FP + G+
Sbjct: 188 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-FPPFYSNTGQ 235
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM-------NQESAQELMIAYKSPEFLQLGRITK 549
H +K +N++++ + + D+G+ + Q +A Y SPE + +
Sbjct: 139 HRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDA 198
Query: 550 KTDVWSLGVLILEIMTGKFP 569
++DV+SLG ++ E++TG+ P
Sbjct: 199 RSDVYSLGCVLYEVLTGEPP 218
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 52/108 (48%), Gaps = 20/108 (18%)
Query: 473 LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQEL 532
L I +A+ +++L+ + L+ H +K SN+ + D+GL+ M+Q+ ++
Sbjct: 167 LHIFIQIAEAVEFLHSK--GLM--HRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 222
Query: 533 MIA----------------YKSPEFLQLGRITKKTDVWSLGVLILEIM 564
++ Y SPE + + K D++SLG+++ E++
Sbjct: 223 VLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVM-------NQESAQELMIAYKSPEFLQLGRITK 549
H +K +N++++ + + D+G+ + Q +A Y SPE + +
Sbjct: 156 HRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDA 215
Query: 550 KTDVWSLGVLILEIMTGKFP 569
++DV+SLG ++ E++TG+ P
Sbjct: 216 RSDVYSLGCVLYEVLTGEPP 235
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 97 LRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKF 156
L+ + L+ N+ IP AFD +T+L+ L L+ NQ + RL +L + L GN+F
Sbjct: 133 LKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Query: 157 E 157
+
Sbjct: 192 D 192
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 97 LRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKF 156
L+ + L+ N+ IP AFD +T+L+ L L+ NQ + RL +L + L GN+F
Sbjct: 133 LKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Query: 157 E 157
+
Sbjct: 192 D 192
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 82/205 (40%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K + + AM ++ + K + E R L + P L+ L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+VP + +L +P + +++ + L +YR+L
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL- 160
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 161 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 211
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 212 VDWWALGVLIYEMAAG-YPPFFADQ 235
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI-PVMNQESA-----QEL 532
VA+G+ +L S H + + NVLL + D+GL +MN + L
Sbjct: 169 VAQGMAFL----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 224
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE + T ++DVWS G+L+ EI +
Sbjct: 225 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 474 KIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGL---IPVMNQ 526
+I+K + + +QYL+ S+ H +K N LL S P L D+G N
Sbjct: 120 EIMKSIGEAIQYLH----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNS 174
Query: 527 ESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQG 576
+ Y +PE L + K D+WSLGV++ ++ G +P + G
Sbjct: 175 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHG 223
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 474 KIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGL---IPVMNQ 526
+I+K + + +QYL+ S+ H +K N LL S P L D+G N
Sbjct: 127 EIMKSIGEAIQYLH----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNS 181
Query: 527 ESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQG 576
+ Y +PE L + K D+WSLGV++ ++ G +P + G
Sbjct: 182 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHG 230
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 474 KIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGL---IPVMNQ 526
+I+K + + +QYL+ S+ H +K N LL S P L D+G N
Sbjct: 119 EIMKSIGEAIQYLH----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNS 173
Query: 527 ESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQG 576
+ Y +PE L + K D+WSLGV++ ++ G +P + G
Sbjct: 174 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHG 222
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 474 KIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGL---IPVMNQ 526
+I+K + + +QYL+ S+ H +K N LL S P L D+G N
Sbjct: 125 EIMKSIGEAIQYLH----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNS 179
Query: 527 ESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQG 576
+ Y +PE L + K D+WSLGV++ ++ G +P + G
Sbjct: 180 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHG 228
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 474 KIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGL---IPVMNQ 526
+I+K + + +QYL+ S+ H +K N LL S P L D+G N
Sbjct: 121 EIMKSIGEAIQYLH----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNS 175
Query: 527 ESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQG 576
+ Y +PE L + K D+WSLGV++ ++ G +P + G
Sbjct: 176 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHG 224
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 73/183 (39%), Gaps = 40/183 (21%)
Query: 408 GREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEK--LLVHEF-----------VPKRSLAV 454
G ++ ++ L RLRH N++ LV Y +E++ +V E+ VP++ V
Sbjct: 49 GEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPV 108
Query: 455 NLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPV 514
H Q + GL+YL+ + ++ H IK N+LL
Sbjct: 109 -CQAHGYFCQ--------------LIDGLEYLHSQ--GIV--HKDIKPGNLLLTTGGTLK 149
Query: 515 LADYGLIPVMNQESAQELMIAYKSPEFLQLGRITK--------KTDVWSLGVLILEIMTG 566
++ G+ ++ +A + + Q I K D+WS GV + I TG
Sbjct: 150 ISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
Query: 567 KFP 569
+P
Sbjct: 210 LYP 212
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 474 KIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGL---IPVMNQ 526
+I+K + + +QYL+ S+ H +K N LL S P L D+G N
Sbjct: 171 EIMKSIGEAIQYLH----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNS 225
Query: 527 ESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQG 576
+ Y +PE L + K D+WSLGV++ ++ G +P + G
Sbjct: 226 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHG 274
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 474 KIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGL---IPVMNQ 526
+I+K + + +QYL+ S+ H +K N LL S P L D+G N
Sbjct: 135 EIMKSIGEAIQYLH----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNS 189
Query: 527 ESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQG 576
+ Y +PE L + K D+WSLGV++ ++ G +P + G
Sbjct: 190 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHG 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPLVA 432
LG+G FG + TG +K + V ++ + + R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+VP + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 168 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPLVA 432
LG+G FG + TG +K + V ++ + + R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+VP + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 168 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPLVA 432
LG+G FG + TG +K + V ++ + + R L + P L+ L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+VP + +L +P + +++ + L +YR+L
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 168
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 169 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 220 VDWWALGVLIYEMAAG-YPPFFADQ 243
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 474 KIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGL---IPVMNQ 526
+I+K + + +QYL+ S+ H +K N LL S P L D+G N
Sbjct: 121 EIMKSIGEAIQYLH----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNS 175
Query: 527 ESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQG 576
+ Y +PE L + K D+WSLGV++ ++ G +P + G
Sbjct: 176 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHG 224
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 474 KIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGL---IPVMNQ 526
+I+K + + +QYL+ S+ H +K N LL S P L D+G N
Sbjct: 165 EIMKSIGEAIQYLH----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNS 219
Query: 527 ESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQG 576
+ Y +PE L + K D+WSLGV++ ++ G +P + G
Sbjct: 220 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHG 268
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 474 KIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGLIP-VMNQES 528
+I+K + + +QYL+ S+ H +K N LL S P L D+G + S
Sbjct: 119 EIMKSIGEAIQYLH----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNS 173
Query: 529 AQELMIA--YKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQG 576
E Y +PE L + K D+WSLGV++ ++ G +P + G
Sbjct: 174 LTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHG 222
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPLVA 432
LG+G FG + TG +K + V +E + + R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+ P + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+++++ + D+GL + + Y +PE + K
Sbjct: 168 ---------KPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPLVA 432
LG+G FG + TG +K + V ++ + + R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+VP + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 168 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 474 KIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGL---IPVMNQ 526
+I+K + + +QYL+ S+ H +K N LL S P L D+G N
Sbjct: 126 EIMKSIGEAIQYLH----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNS 180
Query: 527 ESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQG 576
+ Y +PE L + K D+WSLGV++ ++ G +P + G
Sbjct: 181 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHG 229
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 83/209 (39%), Gaps = 30/209 (14%)
Query: 376 ILGSGCFG----SSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+LG G FG S K + A+ ++K+ + + E R L P L +
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 432 AYYYRKEEKL-LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL---- 486
++ ++L V E+V L ++ Q +G+ P + +A GL +L
Sbjct: 408 HSCFQTMDRLYFVMEYVNGGDLMYHI---QQVGR--FKEPHAVFYAAEIAIGLFFLQSKG 462
Query: 487 --YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPE 540
YR+L K NV+L+ +AD+G+ + Y +PE
Sbjct: 463 IIYRDL----------KLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPE 512
Query: 541 FLQLGRITKKTDVWSLGVLILEIMTGKFP 569
+ K D W+ GVL+ E++ G+ P
Sbjct: 513 IIAYQPYGKSVDWWAFGVLLYEMLAGQAP 541
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPLVA 432
LG+G FG + TG +K + V ++ + + R L + P L+ L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+VP + +L +P + +++ + L +YR+L
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 168
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 169 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKA 219
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 220 VDWWALGVLIYEMAAG-YPPFFADQ 243
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPLVA 432
LG+G FG + TG +K + V ++ + + R L + P L+ L
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 94
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+VP + +L +P + +++ + L +YR+L
Sbjct: 95 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 153
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 154 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKA 204
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 205 VDWWALGVLIYEMAAG-YPPFFADQ 228
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI-PVMNQESA-----QEL 532
VA+G+ +L S H + + NVLL + D+GL +MN + L
Sbjct: 161 VAQGMAFL----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 216
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE + T ++DVWS G+L+ EI +
Sbjct: 217 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPLVA 432
LG+G FG + TG +K + V +E + + R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+ P + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+++++ + D+GL + + Y +PE + K
Sbjct: 168 ---------KPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|3ZYI|A Chain A, Netring2 In Complex With Ngl2
Length = 452
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 47 IWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQ---LGNGALRSVYLS 103
++ LK ++G+ D+ L L + L + N+ P++R G +L+ +++
Sbjct: 195 LFNLKYLNLGMCNIKDMPNLTPLVGLEELEMSGNHF----PEIRPGSFHGLSSLKKLWVM 250
Query: 104 NNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKF 156
N++ S I +AFDG+ SL +L LA N + + T L LVEL L N +
Sbjct: 251 NSQVS-LIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPW 302
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI-PVMNQESA-----QEL 532
VA+G+ +L S H + + NVLL + D+GL +MN + L
Sbjct: 167 VAQGMAFL----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 222
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE + T ++DVWS G+L+ EI +
Sbjct: 223 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI-PVMNQESA-----QEL 532
VA+G+ +L S H + + NVLL + D+GL +MN + L
Sbjct: 175 VAQGMAFL----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 230
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE + T ++DVWS G+L+ EI +
Sbjct: 231 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 88/246 (35%), Gaps = 57/246 (23%)
Query: 377 LGSGCFGSSYKA------SLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPL 430
+G G +G A ++ +M + +Q+N E + +R + +L HPN+ L
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 431 VAYYYRKEEKLLVHEFVPKRSL---------------------------------AVN-- 455
Y ++ LV E L A+N
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 456 LHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLL--NESLEP 513
+HG + SLD+ R K++ + + + L + H IK N L N+S E
Sbjct: 154 IHGFRE----SLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEI 209
Query: 514 VLADYGL---IPVMNQESAQELMIAYKSPEFLQLGRITK-------KTDVWSLGVLILEI 563
L D+GL +N + +P F+ + K D WS GVL+ +
Sbjct: 210 KLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLL 269
Query: 564 MTGKFP 569
+ G P
Sbjct: 270 LMGAVP 275
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 39/179 (21%)
Query: 410 EEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQ-PSLD 468
E+ + + L +L HPN++ LV E L F + + Q P ++
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVF-------------ELVNQGPVME 127
Query: 469 WPSRLKI--------VKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL 520
P+ + + + KG++YL+ + +I H IK SN+L+ E +AD+G
Sbjct: 128 VPTLKPLSEDQARFYFQDLIKGIEYLHYQ--KII--HRDIKPSNLLVGEDGHIKIADFG- 182
Query: 521 IPVMNQESAQELMI-------AYKSPEFLQLGRIT---KKTDVWSLGVLILEIMTGKFP 569
V N+ + ++ A+ +PE L R K DVW++GV + + G+ P
Sbjct: 183 --VSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPLVA 432
LG+G FG + TG +K + V ++ + + R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+VP + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 168 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 62 DITILKELREMRTLSLMRNNLEG-PMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMT 120
DI+ LKEL + L L N L+ P +L N L+ + L N+ +P FD +T
Sbjct: 77 DISALKELTNLTYLILTGNQLQSLPNGVFDKLTN--LKELVLVENQLQS-LPDGVFDKLT 133
Query: 121 SLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEG 158
+L L L NQ +L+ L L L+ N+ +
Sbjct: 134 NLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQS 171
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 66 LKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKL 125
++ L +R L+L N L + L++L N L + L+ N+ +P FD +T+L++L
Sbjct: 59 IQYLPNVRYLALGGNKLHD-ISALKELTN--LTYLILTGNQLQS-LPNGVFDKLTNLKEL 114
Query: 126 LLADNQFNGPIPESLTRLSRLVELRLEGNKFEG 158
+L +NQ +L+ L L L N+ +
Sbjct: 115 VLVENQLQSLPDGVFDKLTNLTYLYLYHNQLQS 147
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Query: 65 ILKELREMRTLSLMRNNLEG-PMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLR 123
+ +L + L L N L+ P +L N L + L NN+ +P FD +T L+
Sbjct: 128 VFDKLTNLTYLYLYHNQLQSLPKGVFDKLTN--LTRLDLDNNQLQS-LPEGVFDKLTQLK 184
Query: 124 KLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF 163
+L L DNQ RL+ L + L N ++ D
Sbjct: 185 QLSLNDNQLKSVPDGVFDRLTSLTHIWLLNNPWDCACSDI 224
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 82/205 (40%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPLVA 432
+G+G FG + TG +K + V ++ + + R L + P L+ L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E++P + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ +AD+G + + Y +PE + K
Sbjct: 168 ---------KPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPLVA 432
LG+G FG + TG +K + V ++ + + R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+VP + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 168 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPLVA 432
LG+G FG + TG +K + V ++ + + R L + P L+ L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+VP + +L +P + +++ + L +YR+L
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL- 168
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 169 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 220 VDWWALGVLIYEMAAG-YPPFFADQ 243
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 82/205 (40%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPLVA 432
+G+G FG + TG +K + V ++ + + R L + P L+ L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E++P + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ +AD+G + + Y +PE + K
Sbjct: 168 ---------KPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K S + AM ++ + K + E R L + P L+ L
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 95
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+V + +L +P + +++ + L +YR+L
Sbjct: 96 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 154
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L++E + D+G + + Y +PE + K
Sbjct: 155 ---------KPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 205
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 206 VDWWALGVLIYEMAAG-YPPFFADQ 229
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 15/83 (18%)
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVMNQESA--------QELMIA------YKSPE-F 541
H +K SN+L+N + + + D+GL ++++ +A Q M+ Y++PE
Sbjct: 135 HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVM 194
Query: 542 LQLGRITKKTDVWSLGVLILEIM 564
L + ++ DVWS G ++ E+
Sbjct: 195 LTSAKYSRAMDVWSCGCILAELF 217
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 112/275 (40%), Gaps = 50/275 (18%)
Query: 333 SGQCSPSSTEAVVGGKK------PEIKLSFVRDDVERFDLHDL-----------LR---A 372
SG + +TE V GK+ EI LS R+ V F DL LR
Sbjct: 81 SGNGTFVNTELVGKGKRRPLNNNSEIALSLSRNKV--FVFFDLTVDDQSVYPKALRDEYI 138
Query: 373 SAEILGSGCFGSSYKA----SLSTGAMMVVKRFKQMNNVGRE-----EFQEHMRRLGRLR 423
++ LGSG G A + A+ ++ + K RE + + L +L
Sbjct: 139 MSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN 198
Query: 424 HPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGL 483
HP ++ + ++ E+ +V E + L + G++ L + + +L + + +
Sbjct: 199 HPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEAT----CKLYFYQMLL-AV 252
Query: 484 QYLYRELPSLIAPHGHIKSSNVLLNESLEPVL---ADYGLIPVMNQESAQELMI---AYK 537
QYL+ +I H +K NVLL+ E L D+G ++ + S + Y
Sbjct: 253 QYLHEN--GII--HRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYL 308
Query: 538 SPEFLQ---LGRITKKTDVWSLGVLILEIMTGKFP 569
+PE L + D WSLGV++ ++G P
Sbjct: 309 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
>pdb|2V70|A Chain A, Third Lrr Domain Of Human Slit2
pdb|2V70|B Chain B, Third Lrr Domain Of Human Slit2
pdb|2V70|C Chain C, Third Lrr Domain Of Human Slit2
pdb|2V70|D Chain D, Third Lrr Domain Of Human Slit2
Length = 220
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 96 ALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNK 155
+L+++ L +NR + + D+F G++S+R L L DNQ P + L L L L N
Sbjct: 106 SLKTLMLRSNRITC-VGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANP 164
Query: 156 F 156
F
Sbjct: 165 F 165
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 18/155 (11%)
Query: 424 HPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGL 483
HPN++ L Y LV + + K L L L + K + + + L
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSE---------KETRKIMRAL 120
Query: 484 QYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQ-ESAQEL--MIAYKSPE 540
+ L L H +K N+LL++ + L D+G ++ E +E+ +Y +PE
Sbjct: 121 LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPE 180
Query: 541 FLQLGR------ITKKTDVWSLGVLILEIMTGKFP 569
++ K+ D+WS GV++ ++ G P
Sbjct: 181 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVL-LNESLEPV---LADYGLIPVMNQESAQELMI 534
+ K ++YL+ + H +K SN+L ++ES P + D+G + E+
Sbjct: 125 ITKTVEYLHAQG----VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTP 180
Query: 535 AYKS----PEFLQLGRITKKTDVWSLGVLILEIMTGKFP 569
Y + PE L+ D+WSLGVL+ +TG P
Sbjct: 181 CYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K S + AM ++ + K + E R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+V + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIP-VMNQESAQELMIAYKSPEFLQLGRITKK 550
K N+L+++ + D+G V + Y +PE + K
Sbjct: 168 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K S + AM ++ + K + E R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+V + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIP-VMNQESAQELMIAYKSPEFLQLGRITKK 550
K N+L+++ + D+G V + Y +PE + K
Sbjct: 168 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 112/275 (40%), Gaps = 50/275 (18%)
Query: 333 SGQCSPSSTEAVVGGKK------PEIKLSFVRDDVERFDLHDL-----------LR---A 372
SG + +TE V GK+ EI LS R+ V F DL LR
Sbjct: 95 SGNGTFVNTELVGKGKRRPLNNNSEIALSLSRNKV--FVFFDLTVDDQSVYPKALRDEYI 152
Query: 373 SAEILGSGCFGSSYKA----SLSTGAMMVVKRFKQMNNVGRE-----EFQEHMRRLGRLR 423
++ LGSG G A + A+ ++ + K RE + + L +L
Sbjct: 153 MSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN 212
Query: 424 HPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGL 483
HP ++ + ++ E+ +V E + L + G++ L + + +L + + +
Sbjct: 213 HPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEAT----CKLYFYQMLL-AV 266
Query: 484 QYLYRELPSLIAPHGHIKSSNVLLNESLEPVL---ADYGLIPVMNQESAQELMI---AYK 537
QYL+ +I H +K NVLL+ E L D+G ++ + S + Y
Sbjct: 267 QYLHEN--GII--HRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYL 322
Query: 538 SPEFLQ---LGRITKKTDVWSLGVLILEIMTGKFP 569
+PE L + D WSLGV++ ++G P
Sbjct: 323 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 357
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 92/240 (38%), Gaps = 37/240 (15%)
Query: 351 EIKLSFVRDDVERFDLHDLLRASAEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVG-- 408
++KLS R+ VE DL +G G +G YKA G KQ+ G
Sbjct: 8 KVKLSSERERVE-----DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS 62
Query: 409 ----REEFQEHMRRLGRLRHPNLLPLVAYYYRKEEK---LLVHEFVPKRSLAVNLHGHQA 461
RE + L L+HPN++ L + ++ LL + H
Sbjct: 63 MSACRE-----IALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASK 117
Query: 462 LGQPSLDWPSRL--KIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLL----NESLEPVL 515
+ + P + ++ + G+ YL+ H +K +N+L+ E +
Sbjct: 118 ANKKPVQLPRGMVKSLLYQILDGIHYLHANW----VLHRDLKPANILVMGEGPERGRVKI 173
Query: 516 ADYGLIPVMNQE-------SAQELMIAYKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGK 567
AD G + N + Y++PE L R TK D+W++G + E++T +
Sbjct: 174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 83/209 (39%), Gaps = 30/209 (14%)
Query: 376 ILGSGCFG----SSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLV 431
+LG G FG S K + A+ ++K+ + + E R L P L +
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 432 AYYYRKEEKL-LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYL---- 486
++ ++L V E+V L ++ Q +G+ P + +A GL +L
Sbjct: 87 HSCFQTMDRLYFVMEYVNGGDLMYHI---QQVGR--FKEPHAVFYAAEIAIGLFFLQSKG 141
Query: 487 --YRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA----YKSPE 540
YR+L K NV+L+ +AD+G+ + Y +PE
Sbjct: 142 IIYRDL----------KLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPE 191
Query: 541 FLQLGRITKKTDVWSLGVLILEIMTGKFP 569
+ K D W+ GVL+ E++ G+ P
Sbjct: 192 IIAYQPYGKSVDWWAFGVLLYEMLAGQAP 220
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 18/155 (11%)
Query: 424 HPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGL 483
HPN++ L Y LV + + K L L L + K + + + L
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSE---------KETRKIMRAL 133
Query: 484 QYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQ-ESAQEL--MIAYKSPE 540
+ L L H +K N+LL++ + L D+G ++ E +E+ +Y +PE
Sbjct: 134 LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPE 193
Query: 541 FLQLGR------ITKKTDVWSLGVLILEIMTGKFP 569
++ K+ D+WS GV++ ++ G P
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 15/83 (18%)
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVMN-----------QESAQELMIA---YKSPE-F 541
H +K SN+L+N + + + D+GL +++ Q+S +A Y++PE
Sbjct: 135 HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVM 194
Query: 542 LQLGRITKKTDVWSLGVLILEIM 564
L + ++ DVWS G ++ E+
Sbjct: 195 LTSAKYSRAMDVWSCGCILAELF 217
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K S + AM ++ + K + E R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+V + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 168 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K S + AM ++ + K + E R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+V + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 168 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 89/212 (41%), Gaps = 20/212 (9%)
Query: 367 HDLLRASAEIL---GSGCFGSSYKAS----LSTGAMMVVKRFKQMNNVGREEFQ--EHMR 417
HD + E+L G G FG KA A+ +V+ K+ + EE + EH+R
Sbjct: 92 HDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLR 151
Query: 418 RLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVK 477
+ + N++ ++ + + + E L++NL+ L + + L +V+
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHICMTFEL-----LSMNLY---ELIKKNKFQGFSLPLVR 203
Query: 478 GVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLA--DYGLIPVMNQESAQELMIA 535
A + L H +K N+LL + + D+G +Q +
Sbjct: 204 KFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSR 263
Query: 536 -YKSPEFLQLGRITKKTDVWSLGVLILEIMTG 566
Y++PE + R D+WSLG ++ E++TG
Sbjct: 264 FYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 12/85 (14%)
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-----YKSPEFLQ-------L 544
H IK N+LL+ LAD+G + + ++A Y SPE LQ
Sbjct: 185 HRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGT 244
Query: 545 GRITKKTDVWSLGVLILEIMTGKFP 569
G + D W+LGV E+ G+ P
Sbjct: 245 GSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 15/83 (18%)
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVMN-----------QESAQELMIA---YKSPE-F 541
H +K SN+L+N + + + D+GL +++ Q+S +A Y++PE
Sbjct: 135 HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVM 194
Query: 542 LQLGRITKKTDVWSLGVLILEIM 564
L + ++ DVWS G ++ E+
Sbjct: 195 LTSAKYSRAMDVWSCGCILAELF 217
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K S + AM ++ + K + E R L + P L+ L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+V + +L +P + +++ + L +YR+L
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 188
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 189 ---------KPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGYNKA 239
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 240 VDWWALGVLIYEMAAG-YPPFFADQ 263
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K S + AM ++ + K + E R L + P L+ L
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+V + +L +P + +++ + L +YR+L
Sbjct: 110 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 168
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 169 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 220 VDWWALGVLIYEMAAG-YPPFFADQ 243
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K S + AM ++ + K + E R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+V + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 168 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 91/215 (42%), Gaps = 38/215 (17%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQE-HMRRLGRLRHPNLLPLVAY 433
E +G G FG ++ G + VK F R F+E + + LRH N+L +A
Sbjct: 48 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREE--RSWFREAEIYQTVMLRHENILGFIAA 104
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQAL----GQPSLDWPSRLKIVKGVAKGLQYLYRE 489
+ + L + H H +L + ++ +K+ A GL +L+ E
Sbjct: 105 DNKDNGTW------TQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 158
Query: 490 L------PSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-------- 535
+ P++ H +KS N+L+ ++ +AD GL V + + + IA
Sbjct: 159 IVGTQGKPAI--AHRDLKSKNILVKKNGTCCIADLGL-AVRHDSATDTIDIAPNHRVGTK 215
Query: 536 -YKSPEFL------QLGRITKKTDVWSLGVLILEI 563
Y +PE L + K+ D++++G++ EI
Sbjct: 216 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K S + AM ++ + K + E R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+V + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 168 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K S + AM ++ + K + E R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+V + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 168 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 91/215 (42%), Gaps = 38/215 (17%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQE-HMRRLGRLRHPNLLPLVAY 433
E +G G FG ++ G + VK F R F+E + + LRH N+L +A
Sbjct: 35 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREE--RSWFREAEIYQTVMLRHENILGFIAA 91
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQAL----GQPSLDWPSRLKIVKGVAKGLQYLYRE 489
+ + L + H H +L + ++ +K+ A GL +L+ E
Sbjct: 92 DNKDNGTW------TQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 145
Query: 490 L------PSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-------- 535
+ P++ H +KS N+L+ ++ +AD GL V + + + IA
Sbjct: 146 IVGTQGKPAI--AHRDLKSKNILVKKNGTCCIADLGL-AVRHDSATDTIDIAPNHRVGTK 202
Query: 536 -YKSPEFL------QLGRITKKTDVWSLGVLILEI 563
Y +PE L + K+ D++++G++ EI
Sbjct: 203 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 91/215 (42%), Gaps = 38/215 (17%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQE-HMRRLGRLRHPNLLPLVAY 433
E +G G FG ++ G + VK F R F+E + + LRH N+L +A
Sbjct: 12 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREE--RSWFREAEIYQTVMLRHENILGFIAA 68
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQAL----GQPSLDWPSRLKIVKGVAKGLQYLYRE 489
+ + L + H H +L + ++ +K+ A GL +L+ E
Sbjct: 69 DNKDNGTW------TQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 122
Query: 490 L------PSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-------- 535
+ P++ H +KS N+L+ ++ +AD GL V + + + IA
Sbjct: 123 IVGTQGKPAI--AHRDLKSKNILVKKNGTCCIADLGL-AVRHDSATDTIDIAPNHRVGTK 179
Query: 536 -YKSPEFL------QLGRITKKTDVWSLGVLILEI 563
Y +PE L + K+ D++++G++ EI
Sbjct: 180 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 26/170 (15%)
Query: 415 HMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLK 474
H+ +L HPN++P A + E +V F+ S + H G L +
Sbjct: 78 HVSKL--FNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNEL---AIAY 132
Query: 475 IVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL---IPVMNQESAQE 531
I++GV K L Y++ + H +K+S++L++ + L+ GL + +++ Q
Sbjct: 133 ILQGVLKALDYIHH----MGYVHRSVKASHILISVDGKVYLS--GLRSNLSMISHGQRQR 186
Query: 532 LM----------IAYKSPEFLQ--LGRITKKTDVWSLGVLILEIMTGKFP 569
++ + + SPE LQ L K+D++S+G+ E+ G P
Sbjct: 187 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVP 236
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 463 GQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIP 522
G+P +++ +A G+ YL + H + + N ++ + D+G+
Sbjct: 120 GRPPPTLQEMIQMAAEIADGMAYLNAKK----FVHRDLAARNCMVAHDFTVKIGDFGMTR 175
Query: 523 VMNQESAQE------LMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + L + + +PE L+ G T +D+WS GV++ EI +
Sbjct: 176 DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 91/215 (42%), Gaps = 38/215 (17%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQE-HMRRLGRLRHPNLLPLVAY 433
E +G G FG ++ G + VK F R F+E + + LRH N+L +A
Sbjct: 10 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREE--RSWFREAEIYQTVMLRHENILGFIAA 66
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQAL----GQPSLDWPSRLKIVKGVAKGLQYLYRE 489
+ + L + H H +L + ++ +K+ A GL +L+ E
Sbjct: 67 DNKDNGTW------TQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 120
Query: 490 L------PSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-------- 535
+ P++ H +KS N+L+ ++ +AD GL V + + + IA
Sbjct: 121 IVGTQGKPAI--AHRDLKSKNILVKKNGTCCIADLGL-AVRHDSATDTIDIAPNHRVGTK 177
Query: 536 -YKSPEFL------QLGRITKKTDVWSLGVLILEI 563
Y +PE L + K+ D++++G++ EI
Sbjct: 178 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 26/170 (15%)
Query: 415 HMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLK 474
H+ +L HPN++P A + E +V F+ S + H G L +
Sbjct: 62 HVSKL--FNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNEL---AIAY 116
Query: 475 IVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL---IPVMNQESAQE 531
I++GV K L Y++ + H +K+S++L++ + L+ GL + +++ Q
Sbjct: 117 ILQGVLKALDYIHH----MGYVHRSVKASHILISVDGKVYLS--GLRSNLSMISHGQRQR 170
Query: 532 LM----------IAYKSPEFLQ--LGRITKKTDVWSLGVLILEIMTGKFP 569
++ + + SPE LQ L K+D++S+G+ E+ G P
Sbjct: 171 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVP 220
>pdb|1H6U|A Chain A, Internalin H: Crystal Structure Of Fused N-Terminal
Domains
Length = 308
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Query: 51 KLEDMGLQGNI--DITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFS 108
K+ ++ L GN +++ + L+ ++TL L + P L L N L+ +YL N+ +
Sbjct: 86 KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTP-LAGLSN--LQVLYLDLNQIT 142
Query: 109 GEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQQKDL 168
P G+T+L+ L + + Q + P L LS+L L+ + NK P +L
Sbjct: 143 NISP---LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISPLASLPNL 197
Query: 169 VSFNVSNNALFGSISP 184
+ ++ NN + +SP
Sbjct: 198 IEVHLKNNQI-SDVSP 212
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 463 GQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIP 522
G+P +++ +A G+ YL + H + + N ++ + D+G+
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKK----FVHRDLAARNCMVAHDFTVKIGDFGMTR 178
Query: 523 VMNQESAQE------LMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + L + + +PE L+ G T +D+WS GV++ EI +
Sbjct: 179 DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 463 GQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIP 522
G+P +++ +A G+ YL + H + + N ++ + D+G+
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKK----FVHRDLAARNCMVAHDFTVKIGDFGMTR 178
Query: 523 VMNQESAQE------LMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + L + + +PE L+ G T +D+WS GV++ EI +
Sbjct: 179 DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 89/212 (41%), Gaps = 20/212 (9%)
Query: 367 HDLLRASAEIL---GSGCFGSSYKAS----LSTGAMMVVKRFKQMNNVGREEFQ--EHMR 417
HD + E+L G G FG KA A+ +V+ K+ + EE + EH+R
Sbjct: 92 HDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLR 151
Query: 418 RLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVK 477
+ + N++ ++ + + + E L++NL+ L + + L +V+
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHICMTFEL-----LSMNLY---ELIKKNKFQGFSLPLVR 203
Query: 478 GVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEP--VLADYGLIPVMNQESAQELMIA 535
A + L H +K N+LL + + D+G +Q +
Sbjct: 204 KFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSR 263
Query: 536 -YKSPEFLQLGRITKKTDVWSLGVLILEIMTG 566
Y++PE + R D+WSLG ++ E++TG
Sbjct: 264 FYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 91/215 (42%), Gaps = 38/215 (17%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQE-HMRRLGRLRHPNLLPLVAY 433
E +G G FG ++ G + VK F R F+E + + LRH N+L +A
Sbjct: 15 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREE--RSWFREAEIYQTVMLRHENILGFIAA 71
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQAL----GQPSLDWPSRLKIVKGVAKGLQYLYRE 489
+ + L + H H +L + ++ +K+ A GL +L+ E
Sbjct: 72 DNKDNGTW------TQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 125
Query: 490 L------PSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-------- 535
+ P++ H +KS N+L+ ++ +AD GL V + + + IA
Sbjct: 126 IVGTQGKPAI--AHRDLKSKNILVKKNGTCCIADLGL-AVRHDSATDTIDIAPNHRVGTK 182
Query: 536 -YKSPEFL------QLGRITKKTDVWSLGVLILEI 563
Y +PE L + K+ D++++G++ EI
Sbjct: 183 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 13/110 (11%)
Query: 474 KIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEP----VLADYGL---IPVMNQ 526
+I K + + +QYL+ S+ H +K N LL S P L D+G N
Sbjct: 165 EIXKSIGEAIQYLH----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNS 219
Query: 527 ESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQG 576
+ Y +PE L + K D WSLGV+ ++ G +P + G
Sbjct: 220 LTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCG-YPPFYSNHG 268
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K S + AM ++ + K + E R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+V + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 168 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 463 GQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIP 522
G+P +++ +A G+ YL + H ++ + N ++ + D+G+
Sbjct: 124 GRPPPTLQEMIQMAAEIADGMAYLNAKK----FVHRNLAARNCMVAHDFTVKIGDFGMTR 179
Query: 523 VMNQESAQE------LMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + L + + +PE L+ G T +D+WS GV++ EI +
Sbjct: 180 DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 91/215 (42%), Gaps = 38/215 (17%)
Query: 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQE-HMRRLGRLRHPNLLPLVAY 433
E +G G FG ++ G + VK F R F+E + + LRH N+L +A
Sbjct: 9 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREE--RSWFREAEIYQTVMLRHENILGFIAA 65
Query: 434 YYRKEEKLLVHEFVPKRSLAVNLHGHQAL----GQPSLDWPSRLKIVKGVAKGLQYLYRE 489
+ + L + H H +L + ++ +K+ A GL +L+ E
Sbjct: 66 DNKDNGTW------TQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 119
Query: 490 L------PSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-------- 535
+ P++ H +KS N+L+ ++ +AD GL V + + + IA
Sbjct: 120 IVGTQGKPAI--AHRDLKSKNILVKKNGTCCIADLGL-AVRHDSATDTIDIAPNHRVGTK 176
Query: 536 -YKSPEFL------QLGRITKKTDVWSLGVLILEI 563
Y +PE L + K+ D++++G++ EI
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 89/212 (41%), Gaps = 20/212 (9%)
Query: 367 HDLLRASAEIL---GSGCFGSSYKAS----LSTGAMMVVKRFKQMNNVGREEFQ--EHMR 417
HD + E+L G G FG KA A+ +V+ K+ + EE + EH+R
Sbjct: 92 HDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLR 151
Query: 418 RLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVK 477
+ + N++ ++ + + + E L++NL+ L + + L +V+
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHICMTFEL-----LSMNLY---ELIKKNKFQGFSLPLVR 203
Query: 478 GVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLA--DYGLIPVMNQESAQELMIA 535
A + L H +K N+LL + + D+G +Q +
Sbjct: 204 KFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSR 263
Query: 536 -YKSPEFLQLGRITKKTDVWSLGVLILEIMTG 566
Y++PE + R D+WSLG ++ E++TG
Sbjct: 264 FYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K S + AM ++ + K + E R L + P L+ L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+V + +L +P + +++ + L +YR+L
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL- 188
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 189 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 239
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 240 VDWWALGVLIYEMAAG-YPPFFADQ 263
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K + + AM ++ + K + E R L + P L+ L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+ P + +L +P + +++ + L +YR+L
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 168
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+++++ + D+G + + Y +PE + K
Sbjct: 169 ---------KPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 220 VDWWALGVLIYEMAAG-YPPFFADQ 243
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 463 GQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIP 522
G+P +++ +A G+ YL + H ++ + N ++ + D+G+
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKK----FVHRNLAARNCMVAHDFTVKIGDFGMTR 178
Query: 523 VMNQESAQE------LMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + L + + +PE L+ G T +D+WS GV++ EI +
Sbjct: 179 DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 463 GQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIP 522
G+P +++ +A G+ YL + H + + N ++ + D+G+
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKK----FVHRDLAARNCMVAHDFTVKIGDFGMTR 178
Query: 523 VMNQESAQE------LMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + + L + + +PE L+ G T +D+WS GV++ EI +
Sbjct: 179 DIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 15/104 (14%)
Query: 65 ILKELREMRTLSLMRNNLEGPMPDLRQLGNG------ALRSVYLSNNRFSGEIPTDAFDG 118
+ EL + L L N L+ L NG +L + LS N+ +P FD
Sbjct: 47 VFDELTSLTQLYLGGNKLQ-------SLPNGVFNKLTSLTYLNLSTNQLQ-SLPNGVFDK 98
Query: 119 MTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPD 162
+T L++L L NQ +L++L +LRL N+ + +PD
Sbjct: 99 LTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK-SVPD 141
Score = 29.6 bits (65), Expect = 5.5, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 10/101 (9%)
Query: 65 ILKELREMRTLSLMRNNLE----GPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMT 120
+ +L + L+L N L+ G L QL AL + L + +P FD +T
Sbjct: 71 VFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQS------LPDGVFDKLT 124
Query: 121 SLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIP 161
L+ L L NQ RL+ L + L N ++ P
Sbjct: 125 QLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 486 LYRELPSLIAPHGHIKSSNVLL-NESLEPV-LADYGLIPVMNQESAQELMIA-YKSPEFL 542
L+ P L H +K N+LL N + + D+G + Q Q + Y+SPE L
Sbjct: 152 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVL 211
Query: 543 QLGRITKKTDVWSLGVLILEIMTGK 567
D+WSLG +++E+ TG+
Sbjct: 212 LGMPYDLAIDMWSLGCILVEMHTGE 236
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K S + AM ++ + K + E R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+V + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 168 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K S + AM ++ + K + E R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+V + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 168 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 497 HGHIKSSNVLLNESLEPV---LADYGLIPVMNQESAQELMIA----YKSPEFLQLGRITK 549
H ++K N+LL L+ LAD+GL + E A Y SPE L+ K
Sbjct: 133 HRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGK 192
Query: 550 KTDVWSLGVLILEIMTGKFP 569
D+W+ GV++ ++ G P
Sbjct: 193 PVDLWACGVILYILLVGYPP 212
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 486 LYRELPSLIAPHGHIKSSNVLL-NESLEPV-LADYGLIPVMNQESAQELMI-AYKSPEFL 542
L+ P L H +K N+LL N + + D+G + Q Q + Y+SPE L
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVL 230
Query: 543 QLGRITKKTDVWSLGVLILEIMTGK 567
D+WSLG +++E+ TG+
Sbjct: 231 LGMPYDLAIDMWSLGCILVEMHTGE 255
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 96/232 (41%), Gaps = 30/232 (12%)
Query: 355 SFVRDDVERFDLHDLLRASAEILGSGCFGSSYKA-SLSTGAMMVVK-----RFKQMNNVG 408
S DDV D+++L E++G G F + + TG VK +F +
Sbjct: 16 SMADDDVLFEDVYEL----CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLS 71
Query: 409 REEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD 468
E+ + L+HP+++ L+ Y +V EF+ L + G +
Sbjct: 72 TEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSE 131
Query: 469 WPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLL--NESLEPV-LADYGLIPVMN 525
+ ++ + + L+Y + ++I H +K VLL E+ PV L +G+ +
Sbjct: 132 AVAS-HYMRQILEALRYCHDN--NII--HRDVKPHCVLLASKENSAPVKLGGFGVAIQLG 186
Query: 526 QESAQELMIA--------YKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFP 569
+ ++A + +PE ++ K DVW GV++ +++G P
Sbjct: 187 ESG----LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 234
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 486 LYRELPSLIAPHGHIKSSNVLL-NESLEPV-LADYGLIPVMNQESAQELMIA-YKSPEFL 542
L+ P L H +K N+LL N + + D+G + Q Q + Y+SPE L
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVL 230
Query: 543 QLGRITKKTDVWSLGVLILEIMTGK 567
D+WSLG +++E+ TG+
Sbjct: 231 LGMPYDLAIDMWSLGCILVEMHTGE 255
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K S + AM ++ + K + E R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+V + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+++++ + D+G + + Y +PE + K
Sbjct: 168 ---------KPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIISKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K S + AM ++ + K + E R L + P L+ L
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 103
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+V + +L +P + +++ + L +YR+L
Sbjct: 104 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL- 162
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 163 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 213
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 214 VDWWALGVLIYEMAAG-YPPFFADQ 237
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 463 GQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIP 522
G+P +++ +A G+ YL + H + + N ++ + D+G+
Sbjct: 122 GRPPPTLQEMIQMAAEIADGMAYLNAKK----FVHRDLAARNCMVAHDFTVKIGDFGMTR 177
Query: 523 VMNQESAQE------LMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + L + + +PE L+ G T +D+WS GV++ EI +
Sbjct: 178 DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K + + AM ++ + K + E R + P L+ L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEF 109
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+ P + +L +P + +++ + L +YR+L
Sbjct: 110 SFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 168
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ +AD+G + + Y +PE + K
Sbjct: 169 ---------KPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 220 VDWWALGVLIYEMAAG-YPPFFADQ 243
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 96/233 (41%), Gaps = 30/233 (12%)
Query: 354 LSFVRDDVERFDLHDLLRASAEILGSGCFGSSYKA-SLSTGAMMVVK-----RFKQMNNV 407
L DDV D+++L E++G G F + + TG VK +F +
Sbjct: 13 LDMADDDVLFEDVYEL----CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGL 68
Query: 408 GREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSL 467
E+ + L+HP+++ L+ Y +V EF+ L + G
Sbjct: 69 STEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYS 128
Query: 468 DWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLL--NESLEPV-LADYGLIPVM 524
+ + ++ + + L+Y + ++I H +K VLL E+ PV L +G+ +
Sbjct: 129 EAVAS-HYMRQILEALRYCHDN--NII--HRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183
Query: 525 NQESAQELMIA--------YKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFP 569
+ ++A + +PE ++ K DVW GV++ +++G P
Sbjct: 184 GESG----LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 497 HGHIKSSNVLLNESLEPV---LADYGLIPVMNQESAQELMIA----YKSPEFLQLGRITK 549
H +K N+LL L+ LAD+GL + E A Y SPE L+ K
Sbjct: 144 HRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGK 203
Query: 550 KTDVWSLGVLILEIMTGKFP 569
D+W+ GV++ ++ G P
Sbjct: 204 PVDLWACGVILYILLVGYPP 223
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 463 GQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIP 522
G+P +++ +A G+ YL + H + + N ++ + D+G+
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKK----FVHRDLAARNCMVAHDFTVKIGDFGMTR 178
Query: 523 VMNQESAQE------LMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + L + + +PE L+ G T +D+WS GV++ EI +
Sbjct: 179 DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 80/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPLVA 432
LG+G FG + TG +K + V ++ + + R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+ P + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+++++ + D+G + + Y +PE + K
Sbjct: 168 ---------KPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 80/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPLVA 432
LG+G FG + TG +K + V ++ + + R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+ P + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+++++ + D+G + + Y +PE + K
Sbjct: 168 ---------KPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 80/202 (39%), Gaps = 17/202 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K S + AM ++ + K + E R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+V + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 168 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANF 572
D W+LGVLI E+ G +P F
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFF 239
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 29/145 (20%)
Query: 43 HR-GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEG-PMPDLRQLGNGA---- 96
HR K+ L L D LQ + I KEL+ + TL + N L+ P+ QL N A
Sbjct: 58 HRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116
Query: 97 ----LRSV------------YLS--NNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPE 138
L+S+ YLS N +P FD +TSL++L L +NQ +PE
Sbjct: 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQS-LPKGVFDKLTSLKELRLYNNQLKR-VPE 174
Query: 139 -SLTRLSRLVELRLEGNKFEGQIPD 162
+ +L+ L L+L+ N+ + ++P+
Sbjct: 175 GAFDKLTELKTLKLDNNQLK-RVPE 198
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 65 ILKELREMRTLSLMRNNLEG-PMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLR 123
+ L ++ LSL N L+ P +L +L+ + L NN+ +P AFD +T L+
Sbjct: 128 VFDSLTKLTYLSLGYNELQSLPKGVFDKLT--SLKELRLYNNQLK-RVPEGAFDKLTELK 184
Query: 124 KLLLADNQFNGPIPE-SLTRLSRLVELRLEGNKFE 157
L L +NQ +PE + L +L L+L+ N ++
Sbjct: 185 TLKLDNNQLKR-VPEGAFDSLEKLKMLQLQENPWD 218
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K S + AM ++ + K + E R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+V + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 168 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI ++ G +P F Q
Sbjct: 219 VDWWALGVLIYQMAAG-YPPFFADQ 242
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 481 KGLQYLYRELPSLIAPHGHIKSSNVLLN-ESLEPVLADYGLIPVMNQESAQELMIA---- 535
+GL+YL+ S HG +K+ NVLL+ + L D+G + + + ++
Sbjct: 196 EGLEYLH----SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYI 251
Query: 536 -----YKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGKFP 569
+ +PE + LGR K DVWS ++L ++ G P
Sbjct: 252 PGTETHMAPEVV-LGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 92/214 (42%), Gaps = 28/214 (13%)
Query: 374 AEILGSGCFGSSYKA----SLSTGAMMVVKRFKQMNNVGREE-----FQEHMRRLGRLRH 424
++ LGSG G A + A+ ++ + K RE + + L +L H
Sbjct: 14 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 73
Query: 425 PNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQ 484
P ++ + ++ E+ +V E + L + G++ L + + +L + + +Q
Sbjct: 74 PCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEAT----CKLYFYQMLL-AVQ 127
Query: 485 YLYRELPSLIAPHGHIKSSNVLLNESLEPVL---ADYGLIPVMNQESAQELMI---AYKS 538
YL+ +I H +K NVLL+ E L D+G ++ + S + Y +
Sbjct: 128 YLHEN--GII--HRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 183
Query: 539 PEFL-QLGR--ITKKTDVWSLGVLILEIMTGKFP 569
PE L +G + D WSLGV++ ++G P
Sbjct: 184 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 92/214 (42%), Gaps = 28/214 (13%)
Query: 374 AEILGSGCFGSSYKA----SLSTGAMMVVKRFKQMNNVGREE-----FQEHMRRLGRLRH 424
++ LGSG G A + A+ ++ + K RE + + L +L H
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 425 PNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQ 484
P ++ + ++ E+ +V E + L + G++ L + + +L + + +Q
Sbjct: 75 PCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEAT----CKLYFYQMLL-AVQ 128
Query: 485 YLYRELPSLIAPHGHIKSSNVLLNESLEPVL---ADYGLIPVMNQESAQELMI---AYKS 538
YL+ +I H +K NVLL+ E L D+G ++ + S + Y +
Sbjct: 129 YLHEN--GII--HRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 539 PEFL-QLGR--ITKKTDVWSLGVLILEIMTGKFP 569
PE L +G + D WSLGV++ ++G P
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 92/214 (42%), Gaps = 28/214 (13%)
Query: 374 AEILGSGCFGSSYKA----SLSTGAMMVVKRFKQMNNVGREE-----FQEHMRRLGRLRH 424
++ LGSG G A + A+ ++ + K RE + + L +L H
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 425 PNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQ 484
P ++ + ++ E+ +V E + L + G++ L + + +L + + +Q
Sbjct: 75 PCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEAT----CKLYFYQMLL-AVQ 128
Query: 485 YLYRELPSLIAPHGHIKSSNVLLNESLEPVL---ADYGLIPVMNQESAQELMI---AYKS 538
YL+ +I H +K NVLL+ E L D+G ++ + S + Y +
Sbjct: 129 YLHEN--GII--HRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 539 PEFL-QLGR--ITKKTDVWSLGVLILEIMTGKFP 569
PE L +G + D WSLGV++ ++G P
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 62/155 (40%), Gaps = 18/155 (11%)
Query: 424 HPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGL 483
HPN++ L Y LV + + K L L L + K + + + L
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSE---------KETRKIMRAL 133
Query: 484 QYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMI---AYKSPE 540
+ L L H +K N+LL++ + L D+G ++ + +Y +PE
Sbjct: 134 LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPE 193
Query: 541 FLQLGR------ITKKTDVWSLGVLILEIMTGKFP 569
++ K+ D+WS GV++ ++ G P
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 92/214 (42%), Gaps = 28/214 (13%)
Query: 374 AEILGSGCFGSSYKA----SLSTGAMMVVKRFKQMNNVGRE-----EFQEHMRRLGRLRH 424
++ LGSG G A + A+ ++ + K RE + + L +L H
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 425 PNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQ 484
P ++ + ++ E+ +V E + L + G++ L + + +L + + +Q
Sbjct: 75 PCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEAT----CKLYFYQMLL-AVQ 128
Query: 485 YLYRELPSLIAPHGHIKSSNVLLNESLEPVL---ADYGLIPVMNQESAQELMI---AYKS 538
YL+ +I H +K NVLL+ E L D+G ++ + S + Y +
Sbjct: 129 YLHEN--GII--HRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 539 PEFL-QLGR--ITKKTDVWSLGVLILEIMTGKFP 569
PE L +G + D WSLGV++ ++G P
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 80/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPLVA 432
LG+G FG + TG +K + V ++ + + R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+ P + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+++++ + D+G + + Y +PE + K
Sbjct: 168 ---------KPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 16/100 (16%)
Query: 481 KGLQYLYRELPSLIAPHGHIKSSNVLLN-ESLEPVLADYGLIPVMNQES-AQELMIA--- 535
+GL+YL+ S HG +K+ NVLL+ + L D+G + + ++L+
Sbjct: 177 EGLEYLH----SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYI 232
Query: 536 -----YKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGKFP 569
+ +PE + LGR K DVWS ++L ++ G P
Sbjct: 233 PGTETHMAPEVV-LGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Query: 497 HGHIKSSNVLLNESLEPV---LADYGLIPVMNQESAQELMIA----YKSPEFLQLGRITK 549
H +K N+LL + LAD+GL + E A Y SPE L+ K
Sbjct: 153 HRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGK 212
Query: 550 KTDVWSLGVLILEIMTGKFP 569
D+W+ GV++ ++ G P
Sbjct: 213 PVDIWACGVILYILLVGYPP 232
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 92/214 (42%), Gaps = 28/214 (13%)
Query: 374 AEILGSGCFGSSYKA----SLSTGAMMVVKRFKQMNNVGRE-----EFQEHMRRLGRLRH 424
++ LGSG G A + A+ ++ + K RE + + L +L H
Sbjct: 21 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 80
Query: 425 PNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQ 484
P ++ + ++ E+ +V E + L + G++ L + + +L + + +Q
Sbjct: 81 PCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEAT----CKLYFYQMLL-AVQ 134
Query: 485 YLYRELPSLIAPHGHIKSSNVLLNESLEPVL---ADYGLIPVMNQESAQELMI---AYKS 538
YL+ +I H +K NVLL+ E L D+G ++ + S + Y +
Sbjct: 135 YLHEN--GII--HRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 190
Query: 539 PEFL-QLGR--ITKKTDVWSLGVLILEIMTGKFP 569
PE L +G + D WSLGV++ ++G P
Sbjct: 191 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 37 WNGVLCHRGKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGA 96
+NG+ + LK+ Q N I ELR + L L + LE P +
Sbjct: 437 FNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFN-SLSS 495
Query: 97 LRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIP 137
L+ + +++N+ +P FD +TSL+K+ L N ++ P
Sbjct: 496 LQVLNMASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 535
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 33.5 bits (75), Expect = 0.41, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 97 LRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKF 156
L+ +Y ++N+ + IPT FD +T L +L L DN + L L + L N +
Sbjct: 59 LQQLYFNSNKLTA-IPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPW 117
Query: 157 EGQIPD 162
+ + D
Sbjct: 118 DCECRD 123
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 97 LRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKF 156
L+ +YL +N+ G +P FD +T L L L NQ RL L EL + NK
Sbjct: 66 LKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKL 124
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 80/205 (39%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPLVA 432
LG+G FG + TG +K + V ++ + + R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+V + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+L+++ + D+G + + Y +PE + K
Sbjct: 168 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 219 VDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 79/205 (38%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPLVA 432
LG+G FG + TG +K + V ++ + + R L + P L L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+ P + +L +P + +++ + L +YR+L
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 168
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+++++ + D+G + + Y +PE + K
Sbjct: 169 ---------KPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 220 VDWWALGVLIYEMAAG-YPPFFADQ 243
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 79/205 (38%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPLVA 432
LG+G FG + TG +K + V ++ + + R L + P L L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+ P + +L +P + +++ + L +YR+L
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 168
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+++++ + D+G + + Y +PE + K
Sbjct: 169 ---------KPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 220 VDWWALGVLIYEMAAG-YPPFFADQ 243
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 536 YKSPEFL-QLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANG 594
+++PE L + T D+WS GV+ L +++G++P KA DL + + G
Sbjct: 212 FRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY------KASDDLTALAQIMTIRG 265
Query: 595 DNRT 598
T
Sbjct: 266 SRET 269
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 82/209 (39%), Gaps = 25/209 (11%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K S + AM ++ + K + E R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+V + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSPEFLQLGRI---- 547
K N+L+++ + D+G + + +PE+L I
Sbjct: 168 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRT----WXLCGTPEYLAPAIILSKG 214
Query: 548 -TKKTDVWSLGVLILEIMTGKFPANFLQQ 575
K D W+LGVLI E+ G +P F Q
Sbjct: 215 YNKAVDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESA------QEL 532
VAKG+ +L S H + + N+LL + D+GL + +S L
Sbjct: 154 VAKGMAFL----ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 209
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE + T ++DVWS G+ + E+ +
Sbjct: 210 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 79/205 (38%), Gaps = 17/205 (8%)
Query: 377 LGSGCFGSSYKAS-LSTGAMMVVKRFKQMNNVGREEFQEHM---RRLGRLRHPNLLPLVA 432
LG+G FG + TG +K + V ++ + + R L + P L L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+ P + +L +P + +++ + L +YR+L
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL- 168
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA-YKSPEFLQLGRITKK 550
K N+++++ + D+G + + Y +PE + K
Sbjct: 169 ---------KPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 551 TDVWSLGVLILEIMTGKFPANFLQQ 575
D W+LGVLI E+ G +P F Q
Sbjct: 220 VDWWALGVLIYEMAAG-YPPFFADQ 243
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 47 IWGL----KLE-DMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVY 101
WGL KL G+ID + + L ++ L L N++ + D LG L+ +
Sbjct: 319 FWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRA-LGDQSFLGLPNLKELA 377
Query: 102 LSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSR 145
L N+ +P FD +TSL+K+ L N ++ P + LSR
Sbjct: 378 LDTNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCPR-IDYLSR 419
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESA------QEL 532
VAKG+ +L S H + + N+LL + D+GL + +S L
Sbjct: 170 VAKGMAFL----ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 225
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE + T ++DVWS G+ + E+ +
Sbjct: 226 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 475 IVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMI 534
I+K V Y++ E H +K SN+L++++ L+D+G M + +
Sbjct: 156 IIKSVLNSFSYIHNEKN---ICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRG 212
Query: 535 AYK--SPEFL--QLGRITKKTDVWSLGVLILEIMTGKFP 569
Y+ PEF + K D+WSLG+ + + P
Sbjct: 213 TYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESA------QEL 532
VAKG+ +L S H + + N+LL + D+GL + +S L
Sbjct: 177 VAKGMAFL----ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARL 232
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE + T ++DVWS G+ + E+ +
Sbjct: 233 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESA------QEL 532
VAKG+ +L S H + + N+LL + D+GL + +S L
Sbjct: 172 VAKGMAFL----ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 227
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE + T ++DVWS G+ + E+ +
Sbjct: 228 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 479 VAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESA------QEL 532
VAKG+ +L S H + + N+LL + D+GL + +S L
Sbjct: 177 VAKGMAFL----ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 232
Query: 533 MIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT 565
+ + +PE + T ++DVWS G+ + E+ +
Sbjct: 233 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 359 DDVERFDLHDLLRASAEILGSGCFGSSY----KASLSTGAMMVVKRFKQMNNVGREEFQE 414
D R L D +E LG G Y K + A+ V+K+ V ++ +
Sbjct: 44 DGSNRDALSDFFEVESE-LGRGATSIVYRCKQKGTQKPYALKVLKK-----TVDKKIVRT 97
Query: 415 HMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNL--HGHQALGQPSLDWPSR 472
+ L RL HPN++ L + E LV E V L + G+ + +
Sbjct: 98 EIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAA------ 151
Query: 473 LKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESL--EPV-LADYGLIPVMNQESA 529
VK + + + YL+ ++ H +K N+L P+ +AD+GL ++ +
Sbjct: 152 -DAVKQILEAVAYLHEN--GIV--HRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL 206
Query: 530 QELMIA---YKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFP 569
+ + Y +PE L+ + D+WS+G++ ++ G P
Sbjct: 207 MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 82/209 (39%), Gaps = 25/209 (11%)
Query: 377 LGSGCFGS----SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVA 432
LG+G FG +K S + AM ++ + K + E R L + P L+ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 433 YYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLD-WPSRLKIVKGVAKGLQYLYRELP 491
+ +V E+V + +L +P + +++ + L +YR+L
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL- 167
Query: 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES-----AQELMIAYKSPEFLQLGR 546
K N+L+++ + D+G + + E + +PE +
Sbjct: 168 ---------KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEAL----APEIILSKG 214
Query: 547 ITKKTDVWSLGVLILEIMTGKFPANFLQQ 575
K D W+LGVLI E+ G +P F Q
Sbjct: 215 YNKAVDWWALGVLIYEMAAG-YPPFFADQ 242
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Query: 497 HGHIKSSNVLLNESLEPV---LADYGLIPVMNQESAQELMIA----YKSPEFLQLGRITK 549
H +K N+LL + LAD+GL + + A Y SPE L+ K
Sbjct: 126 HRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGK 185
Query: 550 KTDVWSLGVLILEIMTGKFP 569
D+W+ GV++ ++ G P
Sbjct: 186 PVDIWACGVILYILLVGYPP 205
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 33/211 (15%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQ----EHMRRLGRLRHPNLLPLV 431
+G G FG +KA TG + +K+ N +E F ++ L L+H N++ L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENE--KEGFPITALREIKILQLLKHENVVNLI 83
Query: 432 --------AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGL 483
Y K LV +F + LA L L + +L R +++ + GL
Sbjct: 84 EICRTKASPYNRCKASIYLVFDFC-EHDLAGLLSN--VLVKFTLSEIKR--VMQMLLNGL 138
Query: 484 QYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--------NQESAQELMIA 535
Y++R H +K++NVL+ LAD+GL N+ + + +
Sbjct: 139 YYIHRNK----ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 536 YKSPEFLQLGR-ITKKTDVWSLGVLILEIMT 565
Y+ PE L R D+W G ++ E+ T
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|1H6T|A Chain A, Internalin B: Crystal Structure Of Fused N-Terminal
Domains
Length = 291
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 38 NGVLCHRGKIWGLKLEDMGLQGN--IDITILKELREMRTLSLMRNNLEGPMPDLRQLGNG 95
NG+ G + +LE + L N DIT+L L ++ TLSL N + +P G
Sbjct: 122 NGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP---LAGLT 178
Query: 96 ALRSVYLSNNRFSGEIPTDAFDGMTSLRKL-LLADNQFNGPI 136
L+++YLS N S A G+ +L L L + N PI
Sbjct: 179 KLQNLYLSKNHISD---LRALAGLKNLDVLELFSQECLNKPI 217
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 110 EIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF 163
+I AF+G+ SL L L DN+ ++ LS+L EL L N E IP +
Sbjct: 73 KIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIES-IPSY 125
>pdb|2UZX|A Chain A, Structure Of The Human Receptor Tyrosine Kinase Met In
Complex With The Listeria Monocytogenes Invasion Protein
Inlb: Crystal Form I
pdb|2UZX|C Chain C, Structure Of The Human Receptor Tyrosine Kinase Met In
Complex With The Listeria Monocytogenes Invasion Protein
Inlb: Crystal Form I
pdb|2UZY|A Chain A, Structure Of The Human Receptor Tyrosine Kinase Met In
Complex With The Listeria Monocytogenes Invasion Protein
Inlb: Low Resolution, Crystal Form Ii
pdb|2UZY|C Chain C, Structure Of The Human Receptor Tyrosine Kinase Met In
Complex With The Listeria Monocytogenes Invasion Protein
Inlb: Low Resolution, Crystal Form Ii
pdb|2WQU|A Chain A, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQU|B Chain B, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQU|C Chain C, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQU|D Chain D, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQU|E Chain E, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQU|F Chain F, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQV|A Chain A, Internalin Domain Of Listeria Monocytogenes Inlb:
Rhombohedral Crystal Form
pdb|2WQV|B Chain B, Internalin Domain Of Listeria Monocytogenes Inlb:
Rhombohedral Crystal Form
Length = 289
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 38 NGVLCHRGKIWGLKLEDMGLQGN--IDITILKELREMRTLSLMRNNLEGPMPDLRQLGNG 95
NG+ G + +LE + L N DIT+L L ++ TLSL N + +P G
Sbjct: 120 NGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP---LAGLT 176
Query: 96 ALRSVYLSNNRFSGEIPTDAFDGMTSLRKL-LLADNQFNGPI 136
L+++YLS N S A G+ +L L L + N PI
Sbjct: 177 KLQNLYLSKNHISD---LRALAGLKNLDVLELFSQECLNKPI 215
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 18/101 (17%)
Query: 481 KGLQYLY--RELPSLIAPHGHIKSSNVLLN-ESLEPVLADYGLIPVMNQESAQELMIA-- 535
+GL+YL+ R L HG +K+ NVLL+ + L D+G + + + ++
Sbjct: 161 EGLEYLHTRRIL------HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 214
Query: 536 -------YKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFP 569
+ +PE + K D+WS ++L ++ G P
Sbjct: 215 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 110 EIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF 163
+I AF+G+ SL L L DN+ ++ LS+L EL L N E IP +
Sbjct: 73 KIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIES-IPSY 125
>pdb|4AW4|A Chain A, Engineered Variant Of Listeria Monocytogenes Inlb
Internalin Domain With An Additional Leucine Rich Repeat
Inserted
pdb|4AW4|B Chain B, Engineered Variant Of Listeria Monocytogenes Inlb
Internalin Domain With An Additional Leucine Rich Repeat
Inserted
pdb|4AW4|C Chain C, Engineered Variant Of Listeria Monocytogenes Inlb
Internalin Domain With An Additional Leucine Rich Repeat
Inserted
Length = 311
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 38 NGVLCHRGKIWGLKLEDMGLQGN--IDITILKELREMRTLSLMRNNLEGPMPDLRQLGNG 95
NG+ G + +LE + L N DIT+L L ++ TLSL N + +P G
Sbjct: 142 NGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP---LAGLT 198
Query: 96 ALRSVYLSNNRFSGEIPTDAFDGMTSLRKL-LLADNQFNGPI 136
L+++YLS N S A G+ +L L L + N PI
Sbjct: 199 KLQNLYLSKNHISD---LRALAGLKNLDVLELFSQECLNKPI 237
>pdb|2Y5Q|A Chain A, Listeria Monocytogenes Inlb (Internalin B) Residues 36-392
Length = 362
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 38 NGVLCHRGKIWGLKLEDMGLQGN--IDITILKELREMRTLSLMRNNLEGPMPDLRQLGNG 95
NG+ G + +LE + L N DIT+L L ++ TLSL N + +P G
Sbjct: 122 NGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP---LAGLT 178
Query: 96 ALRSVYLSNNRFSGEIPTDAFDGMTSLRKL-LLADNQFNGPI 136
L+++YLS N S A G+ +L L L + N PI
Sbjct: 179 KLQNLYLSKNHISD---LRALAGLKNLDVLELFSQECLNKPI 217
>pdb|2WQX|A Chain A, Inlb321_4r: S199r, D200r, G206r, A227r, C242a Mutant Of
The Listeria Monocytogenes Inlb Internalin Domain
pdb|2WQX|B Chain B, Inlb321_4r: S199r, D200r, G206r, A227r, C242a Mutant Of
The Listeria Monocytogenes Inlb Internalin Domain
Length = 289
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 38 NGVLCHRGKIWGLKLEDMGLQGN--IDITILKELREMRTLSLMRNNLEGPMPDLRQLGNG 95
NG+ G + +LE + L N DIT+L L ++ TLSL N + +P R
Sbjct: 120 NGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQIRRIVPLARL---T 176
Query: 96 ALRSVYLSNNRFSGEIPTDAFDGMTSLRKL-LLADNQFNGPI 136
L+++YLS N S A G+ +L L L + N PI
Sbjct: 177 KLQNLYLSKNHISD---LRALRGLKNLDVLELFSQEALNKPI 215
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 18/101 (17%)
Query: 481 KGLQYLY--RELPSLIAPHGHIKSSNVLLN-ESLEPVLADYGLIPVMNQESAQELMIA-- 535
+GL+YL+ R L HG +K+ NVLL+ + L D+G + + + ++
Sbjct: 175 EGLEYLHTRRIL------HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 228
Query: 536 -------YKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFP 569
+ +PE + K D+WS ++L ++ G P
Sbjct: 229 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 13/86 (15%)
Query: 497 HGHIKSSNVLL--NESLEPVLADYGL----IPVMNQESAQEL-------MIAYKSPEFLQ 543
HG IK++N+LL + LADYGL P N + QE I + S + +
Sbjct: 174 HGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHK 233
Query: 544 LGRITKKTDVWSLGVLILEIMTGKFP 569
+++++DV LG +L + GK P
Sbjct: 234 GVALSRRSDVEILGYCMLRWLCGKLP 259
>pdb|1D0B|A Chain A, Internalin B Leucine Rich Repeat Domain
Length = 213
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 38 NGVLCHRGKIWGLKLEDMGLQGN--IDITILKELREMRTLSLMRNNLEGPMPDLRQLGNG 95
NG+ G + +LE + L N DIT+L L ++ TLSL N + +P G
Sbjct: 117 NGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP---LAGLT 173
Query: 96 ALRSVYLSNNRFSGEIPTDAFDGMTSLRKL-LLADNQFNGPI 136
L+++YLS N S A G+ +L L L + N PI
Sbjct: 174 KLQNLYLSKNHISD---LRALAGLKNLDVLELFSQECLNKPI 212
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 33/211 (15%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQ----EHMRRLGRLRHPNLLPLV 431
+G G FG +KA TG + +K+ N +E F ++ L L+H N++ L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENE--KEGFPITALREIKILQLLKHENVVNLI 83
Query: 432 --------AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGL 483
Y K LV +F + LA L L + +L R +++ + GL
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSN--VLVKFTLSEIKR--VMQMLLNGL 138
Query: 484 QYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--------NQESAQELMIA 535
Y++R H +K++NVL+ LAD+GL N+ + + +
Sbjct: 139 YYIHRNK----ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 536 YKSPEFLQLGR-ITKKTDVWSLGVLILEIMT 565
Y+ PE L R D+W G ++ E+ T
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 18/101 (17%)
Query: 481 KGLQYLY--RELPSLIAPHGHIKSSNVLLN-ESLEPVLADYGLIPVMNQESAQELMIA-- 535
+GL+YL+ R L HG +K+ NVLL+ + L D+G + + + ++
Sbjct: 177 EGLEYLHTRRIL------HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 230
Query: 536 -------YKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFP 569
+ +PE + K D+WS ++L ++ G P
Sbjct: 231 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 497 HGHIKSSNVLLNESL-EPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRIT-KKTD 552
H IK N+L++ + E L D+G ++ + Y PE+++ R +
Sbjct: 152 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 211
Query: 553 VWSLGVLILEIMTGKFP 569
VWSLG+L+ +++ G P
Sbjct: 212 VWSLGILLYDMVCGDIP 228
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 497 HGHIKSSNVLLNESL-EPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRIT-KKTD 552
H IK N+L++ + E L D+G ++ + Y PE+++ R +
Sbjct: 137 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 196
Query: 553 VWSLGVLILEIMTGKFP 569
VWSLG+L+ +++ G P
Sbjct: 197 VWSLGILLYDMVCGDIP 213
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 497 HGHIKSSNVLLNESL-EPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRIT-KKTD 552
H IK N+L++ + E L D+G ++ + Y PE+++ R +
Sbjct: 153 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 212
Query: 553 VWSLGVLILEIMTGKFP 569
VWSLG+L+ +++ G P
Sbjct: 213 VWSLGILLYDMVCGDIP 229
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 497 HGHIKSSNVLLNESL-EPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRIT-KKTD 552
H IK N+L++ + E L D+G ++ + Y PE+++ R +
Sbjct: 153 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 212
Query: 553 VWSLGVLILEIMTGKFP 569
VWSLG+L+ +++ G P
Sbjct: 213 VWSLGILLYDMVCGDIP 229
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 497 HGHIKSSNVLLNESL-EPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRIT-KKTD 552
H IK N+L++ + E L D+G ++ + Y PE+++ R +
Sbjct: 153 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 212
Query: 553 VWSLGVLILEIMTGKFP 569
VWSLG+L+ +++ G P
Sbjct: 213 VWSLGILLYDMVCGDIP 229
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 497 HGHIKSSNVLLNESL-EPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRIT-KKTD 552
H IK N+L++ + E L D+G ++ + Y PE+++ R +
Sbjct: 133 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 192
Query: 553 VWSLGVLILEIMTGKFP 569
VWSLG+L+ +++ G P
Sbjct: 193 VWSLGILLYDMVCGDIP 209
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 497 HGHIKSSNVLLNESL-EPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRIT-KKTD 552
H IK N+L++ + E L D+G ++ + Y PE+++ R +
Sbjct: 137 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 196
Query: 553 VWSLGVLILEIMTGKFP 569
VWSLG+L+ +++ G P
Sbjct: 197 VWSLGILLYDMVCGDIP 213
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 497 HGHIKSSNVLLNESL-EPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRIT-KKTD 552
H IK N+L++ + E L D+G ++ + Y PE+++ R +
Sbjct: 133 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 192
Query: 553 VWSLGVLILEIMTGKFP 569
VWSLG+L+ +++ G P
Sbjct: 193 VWSLGILLYDMVCGDIP 209
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 497 HGHIKSSNVLLNESL-EPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRIT-KKTD 552
H IK N+L++ + E L D+G ++ + Y PE+++ R +
Sbjct: 152 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 211
Query: 553 VWSLGVLILEIMTGKFP 569
VWSLG+L+ +++ G P
Sbjct: 212 VWSLGILLYDMVCGDIP 228
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 33/211 (15%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQ----EHMRRLGRLRHPNLLPLV 431
+G G FG +KA TG + +K+ N +E F ++ L L+H N++ L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENE--KEGFPITALREIKILQLLKHENVVNLI 83
Query: 432 --------AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGL 483
Y K LV +F + LA L L + +L R +++ + GL
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSN--VLVKFTLSEIKR--VMQMLLNGL 138
Query: 484 QYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--------NQESAQELMIA 535
Y++R H +K++NVL+ LAD+GL N+ + + +
Sbjct: 139 YYIHRNK----ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 536 YKSPEFLQLGR-ITKKTDVWSLGVLILEIMT 565
Y+ PE L R D+W G ++ E+ T
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 497 HGHIKSSNVLLNESL-EPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRIT-KKTD 552
H IK N+L++ + E L D+G ++ + Y PE+++ R +
Sbjct: 136 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 195
Query: 553 VWSLGVLILEIMTGKFP 569
VWSLG+L+ +++ G P
Sbjct: 196 VWSLGILLYDMVCGDIP 212
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 497 HGHIKSSNVLLNESL-EPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRIT-KKTD 552
H IK N+L++ + E L D+G ++ + Y PE+++ R +
Sbjct: 166 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 225
Query: 553 VWSLGVLILEIMTGKFP 569
VWSLG+L+ +++ G P
Sbjct: 226 VWSLGILLYDMVCGDIP 242
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 497 HGHIKSSNVLLNESL-EPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRIT-KKTD 552
H IK N+L++ + E L D+G ++ + Y PE+++ R +
Sbjct: 133 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 192
Query: 553 VWSLGVLILEIMTGKFP 569
VWSLG+L+ +++ G P
Sbjct: 193 VWSLGILLYDMVCGDIP 209
>pdb|1M9S|A Chain A, Crystal Structure Of Internalin B (Inlb), A Listeria
Monocytogenes Virulence Protein Containing Sh3-Like
Domains
Length = 605
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 38 NGVLCHRGKIWGLKLEDMGLQGN--IDITILKELREMRTLSLMRNNLEGPMPDLRQLGNG 95
NG+ G + +LE + L N DIT+L L ++ TLSL N + +P G
Sbjct: 119 NGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP---LAGLT 175
Query: 96 ALRSVYLSNNRFSGEIPTDAFDGMTSLRKL-LLADNQFNGPI 136
L+++YLS N S A G+ +L L L + N PI
Sbjct: 176 KLQNLYLSKNHISD---LRALAGLKNLDVLELFSQECLNKPI 214
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 497 HGHIKSSNVLLNESL-EPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRIT-KKTD 552
H IK N+L++ + E L D+G ++ + Y PE+++ R +
Sbjct: 180 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 239
Query: 553 VWSLGVLILEIMTGKFP 569
VWSLG+L+ +++ G P
Sbjct: 240 VWSLGILLYDMVCGDIP 256
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 497 HGHIKSSNVLLNESL-EPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRIT-KKTD 552
H IK N+L++ + E L D+G ++ + Y PE+++ R +
Sbjct: 138 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 197
Query: 553 VWSLGVLILEIMTGKFP 569
VWSLG+L+ +++ G P
Sbjct: 198 VWSLGILLYDMVCGDIP 214
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 497 HGHIKSSNVLLNESL-EPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRIT-KKTD 552
H IK N+L++ + E L D+G ++ + Y PE+++ R +
Sbjct: 172 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 231
Query: 553 VWSLGVLILEIMTGKFP 569
VWSLG+L+ +++ G P
Sbjct: 232 VWSLGILLYDMVCGDIP 248
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 497 HGHIKSSNVLLNESL-EPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRIT-KKTD 552
H IK N+L++ + E L D+G ++ + Y PE+++ R +
Sbjct: 165 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 224
Query: 553 VWSLGVLILEIMTGKFP 569
VWSLG+L+ +++ G P
Sbjct: 225 VWSLGILLYDMVCGDIP 241
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 497 HGHIKSSNVLLNESL-EPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRIT-KKTD 552
H IK N+L++ + E L D+G ++ + Y PE+++ R +
Sbjct: 138 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 197
Query: 553 VWSLGVLILEIMTGKFP 569
VWSLG+L+ +++ G P
Sbjct: 198 VWSLGILLYDMVCGDIP 214
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 497 HGHIKSSNVLLNESL-EPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRIT-KKTD 552
H IK N+L++ + E L D+G ++ + Y PE+++ R +
Sbjct: 138 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 197
Query: 553 VWSLGVLILEIMTGKFP 569
VWSLG+L+ +++ G P
Sbjct: 198 VWSLGILLYDMVCGDIP 214
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 497 HGHIKSSNVLLNESL-EPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRIT-KKTD 552
H IK N+L++ + E L D+G ++ + Y PE+++ R +
Sbjct: 165 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 224
Query: 553 VWSLGVLILEIMTGKFP 569
VWSLG+L+ +++ G P
Sbjct: 225 VWSLGILLYDMVCGDIP 241
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 497 HGHIKSSNVLLNESL-EPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRIT-KKTD 552
H IK N+L++ + E L D+G ++ + Y PE+++ R +
Sbjct: 166 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 225
Query: 553 VWSLGVLILEIMTGKFP 569
VWSLG+L+ +++ G P
Sbjct: 226 VWSLGILLYDMVCGDIP 242
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 497 HGHIKSSNVLLNESL-EPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRIT-KKTD 552
H IK N+L++ + E L D+G ++ + Y PE+++ R +
Sbjct: 166 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 225
Query: 553 VWSLGVLILEIMTGKFP 569
VWSLG+L+ +++ G P
Sbjct: 226 VWSLGILLYDMVCGDIP 242
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 497 HGHIKSSNVLLNESL-EPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRIT-KKTD 552
H IK N+L++ + E L D+G ++ + Y PE+++ R +
Sbjct: 165 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 224
Query: 553 VWSLGVLILEIMTGKFP 569
VWSLG+L+ +++ G P
Sbjct: 225 VWSLGILLYDMVCGDIP 241
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 497 HGHIKSSNVLLNESL-EPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRIT-KKTD 552
H IK N+L++ + E L D+G ++ + Y PE+++ R +
Sbjct: 180 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 239
Query: 553 VWSLGVLILEIMTGKFP 569
VWSLG+L+ +++ G P
Sbjct: 240 VWSLGILLYDMVCGDIP 256
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 497 HGHIKSSNVLLNESL-EPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRIT-KKTD 552
H IK N+L++ + E L D+G ++ + Y PE+++ R +
Sbjct: 185 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 244
Query: 553 VWSLGVLILEIMTGKFP 569
VWSLG+L+ +++ G P
Sbjct: 245 VWSLGILLYDMVCGDIP 261
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 497 HGHIKSSNVLLNESL-EPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRIT-KKTD 552
H IK N+L++ + E L D+G ++ + Y PE+++ R +
Sbjct: 165 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 224
Query: 553 VWSLGVLILEIMTGKFP 569
VWSLG+L+ +++ G P
Sbjct: 225 VWSLGILLYDMVCGDIP 241
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 497 HGHIKSSNVLLNESL-EPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRIT-KKTD 552
H IK N+L++ + E L D+G ++ + Y PE+++ R +
Sbjct: 166 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 225
Query: 553 VWSLGVLILEIMTGKFP 569
VWSLG+L+ +++ G P
Sbjct: 226 VWSLGILLYDMVCGDIP 242
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 497 HGHIKSSNVLLNESL-EPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRIT-KKTD 552
H IK N+L++ + E L D+G ++ + Y PE+++ R +
Sbjct: 180 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 239
Query: 553 VWSLGVLILEIMTGKFP 569
VWSLG+L+ +++ G P
Sbjct: 240 VWSLGILLYDMVCGDIP 256
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 497 HGHIKSSNVLLNESL-EPVLADYGLIPVMNQESAQEL--MIAYKSPEFLQLGRIT-KKTD 552
H IK N+L++ + E L D+G ++ + Y PE+++ R +
Sbjct: 160 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 219
Query: 553 VWSLGVLILEIMTGKFP 569
VWSLG+L+ +++ G P
Sbjct: 220 VWSLGILLYDMVCGDIP 236
>pdb|1OTM|A Chain A, Calcium-Binding Mutant Of The Internalin B Lrr Domain
Length = 236
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 38 NGVLCHRGKIWGLKLEDMGLQGN--IDITILKELREMRTLSLMRNNLEGPMPDLRQLGNG 95
NG+ G + +LE + L N DIT+L L ++ TLSL N + +P G
Sbjct: 140 NGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP---LAGLT 196
Query: 96 ALRSVYLSNNRFSGEIPTDAFDGMTSLRKL-LLADNQFNGPI 136
L+++YLS N S A G+ +L L L + N PI
Sbjct: 197 KLQNLYLSKNHISD---LRALAGLKNLDVLELFSQECLNKPI 235
>pdb|2V9T|B Chain B, Complex Between The Second Lrr Domain Of Slit2 And The
First Ig Domain From Robo1
Length = 220
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 111 IPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNK 155
IP AF LR++ L++NQ + P++ L L L L GNK
Sbjct: 47 IPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91
>pdb|1OTN|A Chain A, Calcium-Binding Mutant Of The Internalin B Lrr Domain
Length = 236
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 38 NGVLCHRGKIWGLKLEDMGLQGN--IDITILKELREMRTLSLMRNNLEGPMPDLRQLGNG 95
NG+ G + +LE + L N DIT+L L ++ TLSL N + +P G
Sbjct: 140 NGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP---LAGLT 196
Query: 96 ALRSVYLSNNRFSGEIPTDAFDGMTSLRKL-LLADNQFNGPI 136
L+++YLS N S A G+ +L L L + N PI
Sbjct: 197 KLQNLYLSKNHISD---LRALAGLKNLDVLELFSQECLNKPI 235
>pdb|1OTO|A Chain A, Calcium-Binding Mutant Of The Internalin B Lrr Domain
Length = 236
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 38 NGVLCHRGKIWGLKLEDMGLQGN--IDITILKELREMRTLSLMRNNLEGPMPDLRQLGNG 95
NG+ G + +LE + L N DIT+L L ++ TLSL N + +P G
Sbjct: 140 NGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP---LAGLT 196
Query: 96 ALRSVYLSNNRFSGEIPTDAFDGMTSLRKL-LLADNQFNGPI 136
L+++YLS N S A G+ +L L L + N PI
Sbjct: 197 KLQNLYLSKNHISD---LRALAGLKNLDVLELFSQECLNKPI 235
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 497 HGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQELMIA---YKSPEFLQLGRITKKTDV 553
H +K SN+++ + D+GL E + Y++PE + + D+
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDI 208
Query: 554 WSLGVLILEIMTGK--FPA-NFLQQGKKADGDLAS 585
WS+G ++ E++ K FP +++ Q K L +
Sbjct: 209 WSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGT 243
>pdb|2V9S|A Chain A, Second Lrr Domain Of Human Slit2
pdb|2V9S|B Chain B, Second Lrr Domain Of Human Slit2
pdb|2V9S|C Chain C, Second Lrr Domain Of Human Slit2
pdb|2V9S|D Chain D, Second Lrr Domain Of Human Slit2
Length = 220
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 111 IPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNK 155
IP AF LR++ L++NQ + P++ L L L L GNK
Sbjct: 47 IPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91
>pdb|2WQW|A Chain A, Double-Disulfide Cross-Linked Crystal Dimer Of The
Listeria Monocytogenes Inlb Internalin Domain
pdb|2WQW|B Chain B, Double-Disulfide Cross-Linked Crystal Dimer Of The
Listeria Monocytogenes Inlb Internalin Domain
Length = 286
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 38 NGVLCHRGKIWGLKLEDMGLQGN--IDITILKELREMRTLSLMRNNLEGPMPDLRQLGNG 95
NG+ G + +LE + L N DIT+L L ++ TLSL N + +P L L
Sbjct: 117 NGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP-LACL--T 173
Query: 96 ALRSVYLSNNRFSGEIPTDAFDGMTSLRKL-LLADNQFNGPI 136
L+++YLS N S A G+ +L L L + N PI
Sbjct: 174 KLQNLYLSKNHISD---LRALCGLKNLDVLELFSQEALNKPI 212
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 10/121 (8%)
Query: 454 VNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEP 513
VN + L Q D+ R + + + K L Y + S+ H +K NVL++
Sbjct: 116 VNNTDFKQLYQTLTDYDIRFYMYE-ILKALDYCH----SMGIMHRDVKPHNVLIDHEHRK 170
Query: 514 V-LADYGLIPVMNQESAQELMIA---YKSPEFLQLGRITKKT-DVWSLGVLILEIMTGKF 568
+ L D+GL + + +A +K PE L ++ + D+WSLG ++ ++ K
Sbjct: 171 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 230
Query: 569 P 569
P
Sbjct: 231 P 231
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 33/211 (15%)
Query: 377 LGSGCFGSSYKA-SLSTGAMMVVKRFKQMNNVGREEFQ----EHMRRLGRLRHPNLLPLV 431
+G G FG +KA TG + +K+ N +E F ++ L L+H N++ L+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENE--KEGFPITALREIKILQLLKHENVVNLI 82
Query: 432 --------AYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGL 483
Y K LV +F + LA L L + +L R +++ + GL
Sbjct: 83 EICRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSN--VLVKFTLSEIKR--VMQMLLNGL 137
Query: 484 QYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM--------NQESAQELMIA 535
Y++R H +K++NVL+ LAD+GL N+ + + +
Sbjct: 138 YYIHRN----KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 193
Query: 536 YKSPEFLQLGR-ITKKTDVWSLGVLILEIMT 565
Y+ PE L R D+W G ++ E+ T
Sbjct: 194 YRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,578,406
Number of Sequences: 62578
Number of extensions: 663197
Number of successful extensions: 3485
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 583
Number of HSP's that attempted gapping in prelim test: 1923
Number of HSP's gapped (non-prelim): 1213
length of query: 678
length of database: 14,973,337
effective HSP length: 105
effective length of query: 573
effective length of database: 8,402,647
effective search space: 4814716731
effective search space used: 4814716731
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)