Query 044996
Match_columns 678
No_of_seqs 593 out of 4932
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 15:22:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044996.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044996hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 3.2E-55 1.1E-59 452.1 21.8 256 373-652 17-293 (299)
2 4aoj_A High affinity nerve gro 100.0 6E-55 2E-59 456.2 24.0 255 373-651 45-322 (329)
3 4gt4_A Tyrosine-protein kinase 100.0 2.4E-54 8.1E-59 447.5 21.4 250 374-647 31-305 (308)
4 3omv_A RAF proto-oncogene seri 100.0 1.9E-53 6.6E-58 438.9 22.7 253 373-651 40-303 (307)
5 3hmm_A TGF-beta receptor type- 100.0 2E-52 6.7E-57 433.9 20.9 262 374-649 8-298 (303)
6 4ase_A Vascular endothelial gr 100.0 1E-51 3.5E-56 435.2 20.2 257 373-652 68-351 (353)
7 4b9d_A Serine/threonine-protei 100.0 5.8E-51 2E-55 426.3 21.7 241 374-641 29-276 (350)
8 4fih_A Serine/threonine-protei 100.0 6.9E-51 2.4E-55 425.0 19.8 240 374-641 79-323 (346)
9 3fpq_A Serine/threonine-protei 100.0 2.9E-50 1E-54 412.1 23.1 241 375-641 32-282 (290)
10 4g3f_A NF-kappa-beta-inducing 100.0 1.3E-50 4.4E-55 421.8 19.4 246 374-651 63-319 (336)
11 4fie_A Serine/threonine-protei 100.0 1E-49 3.6E-54 426.3 21.0 240 374-641 156-400 (423)
12 3hyh_A Carbon catabolite-derep 100.0 7.9E-49 2.7E-53 398.0 24.0 237 374-641 18-262 (275)
13 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.9E-49 6.7E-54 408.0 19.0 239 373-641 36-284 (311)
14 3ubd_A Ribosomal protein S6 ki 100.0 5E-49 1.7E-53 405.0 16.6 234 373-636 28-271 (304)
15 4g31_A Eukaryotic translation 100.0 2.3E-47 7.9E-52 394.0 20.5 240 374-641 10-279 (299)
16 4b99_A Mitogen-activated prote 100.0 1.5E-44 5.1E-49 387.2 21.3 256 374-647 59-352 (398)
17 2qkw_B Protein kinase; three-h 100.0 1.1E-43 3.8E-48 372.4 25.8 269 374-651 44-318 (321)
18 3uto_A Twitchin; kinase, muscl 100.0 7.6E-44 2.6E-48 400.1 22.1 244 373-641 161-410 (573)
19 4f9c_A Cell division cycle 7-r 100.0 5.5E-44 1.9E-48 378.7 19.7 185 373-571 25-248 (361)
20 3uim_A Brassinosteroid insensi 100.0 9.3E-44 3.2E-48 373.7 19.4 280 363-646 19-309 (326)
21 3s95_A LIMK-1, LIM domain kina 100.0 1.2E-42 4.3E-47 362.5 23.7 250 374-650 15-284 (310)
22 3v5w_A G-protein coupled recep 100.0 8.2E-43 2.8E-47 389.2 23.2 242 373-641 193-449 (689)
23 2psq_A Fibroblast growth facto 100.0 1.2E-42 4.1E-47 371.8 22.7 255 374-652 86-368 (370)
24 2nru_A Interleukin-1 receptor- 100.0 1.2E-41 4.1E-46 354.5 26.4 274 361-648 12-306 (307)
25 3kul_A Ephrin type-A receptor 100.0 3.3E-42 1.1E-46 361.9 21.8 251 374-652 54-317 (325)
26 3p86_A Serine/threonine-protei 100.0 6E-42 2.1E-46 357.2 23.2 252 373-650 41-300 (309)
27 4hcu_A Tyrosine-protein kinase 100.0 7.2E-42 2.5E-46 349.2 22.7 247 374-649 15-267 (269)
28 3cbl_A C-FES, proto-oncogene t 100.0 1.4E-42 4.9E-47 372.3 17.9 249 373-649 118-375 (377)
29 3soc_A Activin receptor type-2 100.0 3.5E-42 1.2E-46 361.2 20.0 262 374-649 29-319 (322)
30 3fxz_A Serine/threonine-protei 100.0 6.9E-42 2.4E-46 354.7 21.8 240 374-641 25-269 (297)
31 2qol_A Ephrin receptor; recept 100.0 3.6E-42 1.2E-46 368.4 19.8 249 374-650 50-311 (373)
32 3ugc_A Tyrosine-protein kinase 100.0 4.9E-42 1.7E-46 355.3 19.6 258 374-650 15-293 (295)
33 1qcf_A Haematopoetic cell kina 100.0 5.9E-42 2E-46 376.6 20.9 250 374-652 193-448 (454)
34 2c30_A Serine/threonine-protei 100.0 2.3E-41 7.9E-46 354.8 24.2 239 375-641 51-294 (321)
35 3fe3_A MAP/microtubule affinit 100.0 2.8E-41 9.5E-46 354.9 23.7 238 374-641 20-264 (328)
36 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.3E-41 4.4E-46 347.0 20.3 248 374-650 13-266 (268)
37 3gen_A Tyrosine-protein kinase 100.0 3.1E-41 1.1E-45 347.0 23.4 247 374-649 29-281 (283)
38 3q4u_A Activin receptor type-1 100.0 1.4E-41 4.9E-46 352.6 20.7 254 374-646 13-300 (301)
39 3tt0_A Basic fibroblast growth 100.0 3.5E-41 1.2E-45 362.3 24.3 257 373-653 73-357 (382)
40 1k9a_A Carboxyl-terminal SRC k 100.0 1.9E-41 6.6E-46 371.9 22.2 246 374-649 198-446 (450)
41 3l9p_A Anaplastic lymphoma kin 100.0 1.9E-41 6.4E-46 362.2 21.0 252 374-649 76-346 (367)
42 3zgw_A Maternal embryonic leuc 100.0 4.2E-41 1.4E-45 355.8 22.9 238 374-641 15-260 (347)
43 1luf_A Muscle-specific tyrosin 100.0 2.7E-41 9.3E-46 357.4 20.9 253 374-650 52-337 (343)
44 1opk_A P150, C-ABL, proto-onco 100.0 1.6E-41 5.4E-46 376.9 19.1 249 373-649 224-479 (495)
45 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.8E-41 9.4E-46 370.9 19.9 249 374-651 189-443 (452)
46 3poz_A Epidermal growth factor 100.0 3.8E-41 1.3E-45 354.1 20.0 247 374-649 20-279 (327)
47 4fvq_A Tyrosine-protein kinase 100.0 3.4E-41 1.2E-45 347.8 19.2 247 374-649 13-276 (289)
48 3lb7_A RAF proto-oncogene seri 100.0 9.6E-41 3.3E-45 347.8 22.4 252 374-651 41-303 (307)
49 3t9t_A Tyrosine-protein kinase 100.0 1.1E-40 3.8E-45 339.6 22.1 247 374-649 13-265 (267)
50 3vhe_A Vascular endothelial gr 100.0 2.9E-41 1E-45 359.5 18.5 254 373-649 26-356 (359)
51 4eqm_A Protein kinase; transfe 100.0 1.7E-40 5.9E-45 343.7 23.7 254 374-652 16-279 (294)
52 1mqb_A Ephrin type-A receptor 100.0 1.2E-40 4E-45 351.4 22.6 254 374-655 49-316 (333)
53 3c1x_A Hepatocyte growth facto 100.0 5.1E-41 1.7E-45 359.2 19.9 255 374-656 94-363 (373)
54 3qup_A Tyrosine-protein kinase 100.0 7.7E-41 2.6E-45 351.0 20.8 255 373-651 27-301 (323)
55 2x4f_A Myosin light chain kina 100.0 8.8E-41 3E-45 357.5 21.4 242 375-641 95-342 (373)
56 1o6l_A RAC-beta serine/threoni 100.0 3.6E-40 1.2E-44 347.5 25.7 238 374-641 10-260 (337)
57 1mp8_A Focal adhesion kinase 1 100.0 8.9E-41 3E-45 343.4 20.4 248 373-649 19-277 (281)
58 3kmu_A ILK, integrin-linked ki 100.0 1.2E-40 4E-45 340.0 20.8 247 374-648 15-270 (271)
59 3op5_A Serine/threonine-protei 100.0 8.2E-41 2.8E-45 357.0 20.3 260 374-652 40-333 (364)
60 3dtc_A Mitogen-activated prote 100.0 1.1E-40 3.9E-45 340.4 20.2 246 374-646 12-271 (271)
61 2pvf_A Fibroblast growth facto 100.0 1.5E-40 5.1E-45 350.7 21.6 261 373-657 39-327 (334)
62 1t46_A HOMO sapiens V-KIT hard 100.0 1.4E-40 4.6E-45 347.2 21.1 257 373-652 27-311 (313)
63 1u5q_A Serine/threonine protei 100.0 1.7E-40 5.9E-45 351.9 22.1 241 374-642 59-306 (348)
64 2h8h_A Proto-oncogene tyrosine 100.0 6E-41 2E-45 375.7 19.3 250 373-651 271-526 (535)
65 2eva_A TAK1 kinase - TAB1 chim 100.0 1.8E-40 6.2E-45 345.8 21.5 253 374-652 13-267 (307)
66 2ozo_A Tyrosine-protein kinase 100.0 1.4E-40 4.9E-45 378.0 22.2 246 376-650 343-600 (613)
67 1rjb_A FL cytokine receptor; k 100.0 9.5E-41 3.3E-45 353.5 19.4 260 373-655 49-341 (344)
68 1kob_A Twitchin; kinase, intra 100.0 2.9E-40 9.8E-45 354.7 22.9 243 374-641 56-304 (387)
69 2ivs_A Proto-oncogene tyrosine 100.0 1.5E-40 5.2E-45 347.1 20.0 253 373-649 27-312 (314)
70 2yab_A Death-associated protei 100.0 5.3E-40 1.8E-44 349.4 24.3 242 374-641 17-272 (361)
71 2y0a_A Death-associated protei 100.0 6.2E-40 2.1E-44 344.7 24.4 243 373-641 15-271 (326)
72 4f0f_A Serine/threonine-protei 100.0 5.1E-40 1.7E-44 338.7 22.6 246 374-646 24-287 (287)
73 3mdy_A Bone morphogenetic prot 100.0 1.2E-39 3.9E-44 343.9 25.7 259 373-650 41-333 (337)
74 3pls_A Macrophage-stimulating 100.0 7.3E-40 2.5E-44 339.2 23.7 255 374-655 26-294 (298)
75 3f66_A Hepatocyte growth facto 100.0 4.5E-40 1.6E-44 341.0 22.1 253 374-654 30-297 (298)
76 1u59_A Tyrosine-protein kinase 100.0 3.6E-40 1.2E-44 339.9 21.2 250 375-653 16-277 (287)
77 2bdw_A Hypothetical protein K1 100.0 5.5E-40 1.9E-44 350.0 23.2 243 373-641 33-284 (362)
78 1tki_A Titin; serine kinase, m 100.0 6E-40 2.1E-44 343.9 23.2 242 374-641 10-257 (321)
79 3brb_A Proto-oncogene tyrosine 100.0 2.7E-40 9.2E-45 345.3 20.2 256 373-652 38-312 (313)
80 3gxj_A TGF-beta receptor type- 100.0 4.3E-42 1.5E-46 356.7 6.3 258 374-650 8-299 (303)
81 4euu_A Serine/threonine-protei 100.0 1.3E-39 4.6E-44 341.0 25.3 264 374-647 14-308 (319)
82 2izr_A Casein kinase I isoform 100.0 4.2E-40 1.4E-44 346.6 20.8 254 374-652 14-285 (330)
83 3qd2_B Eukaryotic translation 100.0 5.9E-40 2E-44 345.1 21.9 240 374-641 11-325 (332)
84 3txo_A PKC-L, NPKC-ETA, protei 100.0 4.8E-40 1.6E-44 348.8 21.3 238 374-641 28-280 (353)
85 3kex_A Receptor tyrosine-prote 100.0 9.6E-41 3.3E-45 350.8 15.6 247 374-649 18-277 (325)
86 3soa_A Calcium/calmodulin-depe 100.0 1E-39 3.4E-44 356.4 24.2 243 373-641 15-267 (444)
87 4dc2_A Protein kinase C IOTA t 100.0 5E-40 1.7E-44 353.0 21.4 242 374-636 57-307 (396)
88 3c0i_A Peripheral plasma membr 100.0 3.1E-40 1E-44 350.7 19.6 246 373-641 28-286 (351)
89 3kfa_A Tyrosine-protein kinase 100.0 5.6E-40 1.9E-44 338.4 20.9 249 374-650 18-273 (288)
90 3lxl_A Tyrosine-protein kinase 100.0 3.4E-40 1.1E-44 346.9 19.5 262 374-654 28-309 (327)
91 3og7_A AKAP9-BRAF fusion prote 100.0 4.8E-40 1.6E-44 339.5 20.2 249 374-648 29-288 (289)
92 2buj_A Serine/threonine-protei 100.0 6.5E-40 2.2E-44 342.9 21.5 257 374-653 34-311 (317)
93 3niz_A Rhodanese family protei 100.0 8.7E-40 3E-44 341.2 22.0 253 374-641 26-300 (311)
94 4e5w_A Tyrosine-protein kinase 100.0 4.4E-40 1.5E-44 341.7 19.5 254 374-647 26-301 (302)
95 3h4j_B AMPK kdaid, SNF1-like p 100.0 4.1E-40 1.4E-44 346.8 19.4 237 374-641 14-258 (336)
96 3a62_A Ribosomal protein S6 ki 100.0 1.7E-39 5.9E-44 341.5 24.1 238 374-641 22-276 (327)
97 2zv2_A Calcium/calmodulin-depe 100.0 4.5E-40 1.5E-44 341.2 19.3 239 374-641 18-292 (298)
98 1fot_A TPK1 delta, CAMP-depend 100.0 1.1E-39 3.7E-44 341.2 22.3 238 374-641 11-258 (318)
99 1qpc_A LCK kinase; alpha beta 100.0 5E-40 1.7E-44 337.3 19.4 249 374-651 18-272 (279)
100 4fl3_A Tyrosine-protein kinase 100.0 3.6E-40 1.2E-44 375.6 20.2 244 375-648 375-631 (635)
101 3cc6_A Protein tyrosine kinase 100.0 9E-40 3.1E-44 335.8 21.0 247 374-649 17-274 (281)
102 3lzb_A Epidermal growth factor 100.0 9.1E-40 3.1E-44 343.6 21.3 247 374-649 20-279 (327)
103 2w4o_A Calcium/calmodulin-depe 100.0 1.2E-39 4.3E-44 345.6 22.1 241 374-641 58-305 (349)
104 3a8x_A Protein kinase C IOTA t 100.0 1.2E-39 4.2E-44 344.8 21.9 242 374-636 14-264 (345)
105 3ork_A Serine/threonine protei 100.0 9.4E-40 3.2E-44 341.0 20.3 253 374-652 17-285 (311)
106 1xjd_A Protein kinase C, theta 100.0 8.6E-40 2.9E-44 345.6 20.2 237 374-640 22-268 (345)
107 2h34_A Serine/threonine-protei 100.0 4E-39 1.4E-43 335.9 25.0 251 374-651 39-299 (309)
108 1p4o_A Insulin-like growth fac 100.0 9.2E-40 3.1E-44 342.6 20.3 252 374-649 30-300 (322)
109 2v62_A Serine/threonine-protei 100.0 1.3E-40 4.5E-45 352.7 13.8 262 374-655 42-335 (345)
110 1b6c_B TGF-B superfamily recep 100.0 1.5E-39 5E-44 343.9 21.7 259 373-650 46-338 (342)
111 3tki_A Serine/threonine-protei 100.0 3.8E-40 1.3E-44 345.8 17.0 241 374-641 12-261 (323)
112 2wqm_A Serine/threonine-protei 100.0 2.5E-39 8.6E-44 337.4 23.1 256 374-651 37-300 (310)
113 3lxp_A Non-receptor tyrosine-p 100.0 1.4E-39 4.8E-44 340.8 21.3 257 374-651 36-313 (318)
114 1rdq_E PKA C-alpha, CAMP-depen 100.0 2E-39 6.9E-44 343.7 22.5 238 374-641 46-293 (350)
115 1ob3_A PFPK5, cell division co 100.0 1.1E-39 3.8E-44 336.6 19.9 251 374-641 7-280 (288)
116 2w1i_A JAK2; chromosomal rearr 100.0 8.2E-40 2.8E-44 343.8 19.2 257 374-649 46-323 (326)
117 1csn_A Casein kinase-1; phosph 100.0 7.8E-40 2.7E-44 339.0 18.7 255 374-652 15-287 (298)
118 4fr4_A YANK1, serine/threonine 100.0 2.4E-39 8.2E-44 346.5 22.7 241 374-641 20-271 (384)
119 2xir_A Vascular endothelial gr 100.0 7.2E-40 2.4E-44 342.2 18.2 255 373-650 31-312 (316)
120 4ejn_A RAC-alpha serine/threon 100.0 2.4E-39 8.1E-44 355.2 22.6 239 374-641 153-404 (446)
121 3p1a_A MYT1 kinase, membrane-a 100.0 6.7E-40 2.3E-44 342.1 17.3 237 373-641 61-304 (311)
122 1byg_A CSK, protein (C-termina 100.0 6.7E-40 2.3E-44 336.3 16.9 246 374-649 26-274 (278)
123 2eue_A Carbon catabolite derep 100.0 3.7E-39 1.3E-43 330.1 22.4 237 374-641 18-262 (275)
124 2i1m_A Macrophage colony-stimu 100.0 4.8E-40 1.6E-44 346.5 16.2 253 374-649 51-327 (333)
125 2pmi_A Negative RE, cyclin-dep 100.0 2E-39 6.9E-44 339.5 20.6 255 374-641 10-293 (317)
126 3kn6_A Ribosomal protein S6 ki 100.0 8.2E-40 2.8E-44 343.6 17.6 246 374-641 16-270 (325)
127 3uc3_A Serine/threonine-protei 100.0 2.4E-39 8E-44 345.1 21.1 244 374-642 25-275 (361)
128 1xbb_A Tyrosine-protein kinase 100.0 1.8E-39 6.1E-44 335.5 19.6 244 376-649 24-280 (291)
129 2i0e_A Protein kinase C-beta I 100.0 4E-39 1.4E-43 341.5 22.5 238 374-641 25-276 (353)
130 1u46_A ACK-1, activated CDC42 100.0 1.1E-39 3.9E-44 336.5 17.7 252 374-653 23-289 (291)
131 2yfx_A Tyrosine-protein kinase 100.0 2.9E-39 1E-43 339.7 21.0 253 373-649 34-305 (327)
132 3gni_B Strad alpha; kinase fol 100.0 2.4E-39 8.2E-44 348.9 20.8 192 374-572 30-239 (389)
133 1fvr_A Tyrosine-protein kinase 100.0 2E-39 6.7E-44 341.0 19.5 255 374-652 30-304 (327)
134 3v8s_A RHO-associated protein 100.0 5.5E-40 1.9E-44 354.5 15.6 242 374-642 74-330 (410)
135 2a19_B Interferon-induced, dou 100.0 1.5E-39 5.3E-44 334.2 18.1 243 374-652 16-278 (284)
136 2a2a_A Death-associated protei 100.0 7.4E-39 2.5E-43 335.7 23.5 243 373-641 16-272 (321)
137 3f3z_A Calcium/calmodulin-depe 100.0 6.1E-39 2.1E-43 328.8 22.2 247 374-647 14-269 (277)
138 2y94_A 5'-AMP-activated protei 100.0 2.8E-39 9.6E-44 355.3 21.1 238 374-641 21-266 (476)
139 4aw2_A Serine/threonine-protei 100.0 1.1E-39 3.8E-44 354.8 17.7 244 374-641 79-338 (437)
140 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.2E-39 7.5E-44 346.1 19.6 246 374-651 70-342 (365)
141 3cok_A Serine/threonine-protei 100.0 2.8E-39 9.6E-44 331.5 19.5 239 374-641 16-262 (278)
142 4eut_A Serine/threonine-protei 100.0 3.6E-39 1.2E-43 348.2 21.3 266 374-649 14-310 (396)
143 1nxk_A MAP kinase-activated pr 100.0 3.5E-39 1.2E-43 348.4 21.1 243 375-642 68-322 (400)
144 2ac3_A MAP kinase-interacting 100.0 6.4E-39 2.2E-43 335.2 22.4 249 375-641 19-295 (316)
145 3fdn_A Serine/threonine-protei 100.0 7E-39 2.4E-43 328.8 22.3 239 374-642 14-258 (279)
146 3dbq_A Dual specificity protei 100.0 3.1E-39 1.1E-43 341.9 20.3 240 374-642 14-274 (343)
147 3bhy_A Death-associated protei 100.0 1.8E-38 6.1E-43 326.3 25.3 251 374-650 10-276 (283)
148 3hko_A Calcium/calmodulin-depe 100.0 2.1E-39 7.1E-44 343.3 18.8 248 373-641 30-330 (345)
149 3o0g_A Cell division protein k 100.0 7.1E-39 2.4E-43 331.1 22.3 252 374-641 7-282 (292)
150 3is5_A Calcium-dependent prote 100.0 4.1E-39 1.4E-43 331.8 20.4 244 374-641 27-278 (285)
151 2jii_A Serine/threonine-protei 100.0 1.5E-39 5.2E-44 345.5 17.7 256 374-652 47-340 (352)
152 3g2f_A Bone morphogenetic prot 100.0 6.6E-39 2.2E-43 338.2 22.4 266 374-653 18-323 (336)
153 2jam_A Calcium/calmodulin-depe 100.0 6E-39 2.1E-43 333.7 21.8 242 374-641 14-261 (304)
154 3ll6_A Cyclin G-associated kin 100.0 1.6E-39 5.6E-44 342.5 17.7 250 373-652 32-312 (337)
155 3kk8_A Calcium/calmodulin depe 100.0 8.5E-39 2.9E-43 328.9 22.3 242 374-641 11-261 (284)
156 3llt_A Serine/threonine kinase 100.0 1.4E-38 4.8E-43 339.1 24.7 189 374-571 40-260 (360)
157 2r5t_A Serine/threonine-protei 100.0 4.7E-39 1.6E-43 343.5 20.6 240 374-643 43-291 (373)
158 2zmd_A Dual specificity protei 100.0 4.7E-39 1.6E-43 346.3 20.6 240 374-642 61-321 (390)
159 3byv_A Rhoptry kinase; malaria 100.0 2.9E-40 1E-44 354.4 10.9 244 374-648 78-368 (377)
160 3dls_A PAS domain-containing s 100.0 1.4E-39 4.9E-44 343.2 16.0 233 374-642 29-275 (335)
161 2owb_A Serine/threonine-protei 100.0 9.2E-39 3.2E-43 337.1 22.1 238 374-641 46-291 (335)
162 2rku_A Serine/threonine-protei 100.0 1.3E-38 4.3E-43 329.5 22.6 239 374-642 20-266 (294)
163 2h6d_A 5'-AMP-activated protei 100.0 2.4E-38 8.3E-43 324.1 24.3 238 374-641 16-261 (276)
164 3uzp_A CKI-delta, CKID, casein 100.0 8E-39 2.7E-43 331.1 20.6 255 374-652 14-284 (296)
165 2w5a_A Serine/threonine-protei 100.0 5.1E-39 1.8E-43 329.7 18.8 250 374-644 11-270 (279)
166 2acx_A G protein-coupled recep 100.0 1E-38 3.5E-43 355.7 22.7 244 374-641 189-444 (576)
167 2vd5_A DMPK protein; serine/th 100.0 2.8E-39 9.5E-44 349.3 17.4 243 374-641 66-327 (412)
168 1t4h_A Serine/threonine-protei 100.0 3.6E-38 1.2E-42 325.4 24.9 242 374-641 31-282 (290)
169 3oz6_A Mitogen-activated prote 100.0 8.7E-39 3E-43 344.4 20.8 187 374-571 14-232 (388)
170 1x8b_A WEE1HU, WEE1-like prote 100.0 1.2E-38 4.2E-43 327.8 21.1 240 374-641 16-279 (289)
171 3ttj_A Mitogen-activated prote 100.0 1.5E-38 5.3E-43 349.6 22.7 249 374-641 67-355 (464)
172 4hgt_A Casein kinase I isoform 100.0 6E-39 2E-43 331.9 18.2 255 374-652 14-284 (296)
173 2vgo_A Serine/threonine-protei 100.0 2.3E-38 8E-43 325.8 22.3 243 374-646 19-269 (284)
174 1vzo_A Ribosomal protein S6 ki 100.0 5.4E-39 1.8E-43 341.6 17.9 243 374-642 59-322 (355)
175 3a7i_A MST3 kinase, serine/thr 100.0 1.9E-38 6.6E-43 329.6 21.6 239 374-642 27-271 (303)
176 3g33_A Cell division protein k 100.0 2.4E-38 8.1E-43 329.8 22.3 252 374-641 14-296 (308)
177 4agu_A Cyclin-dependent kinase 100.0 1.3E-38 4.5E-43 332.1 20.2 254 374-641 8-284 (311)
178 3lm5_A Serine/threonine-protei 100.0 1.7E-38 5.7E-43 334.0 20.8 243 375-641 35-287 (327)
179 3mtl_A Cell division protein k 100.0 4.4E-39 1.5E-43 337.9 16.5 265 374-652 7-294 (324)
180 2j0j_A Focal adhesion kinase 1 100.0 1.6E-38 5.4E-43 363.4 22.4 247 373-648 394-651 (656)
181 2j7t_A Serine/threonine-protei 100.0 8.9E-39 3E-43 331.8 18.3 242 374-641 24-275 (302)
182 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.8E-38 9.7E-43 351.3 23.4 241 374-636 190-438 (543)
183 2clq_A Mitogen-activated prote 100.0 1.7E-38 5.9E-43 328.4 20.1 243 375-641 28-278 (295)
184 3eqc_A Dual specificity mitoge 100.0 1.7E-38 5.9E-43 338.5 19.9 190 374-571 38-231 (360)
185 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.3E-38 4.4E-43 335.1 18.7 249 374-641 39-318 (329)
186 1cm8_A Phosphorylated MAP kina 100.0 2.1E-38 7.2E-43 338.5 20.2 252 374-646 30-314 (367)
187 2y7j_A Phosphorylase B kinase 100.0 2.6E-38 8.9E-43 337.6 20.9 242 374-641 99-359 (365)
188 2qr7_A Ribosomal protein S6 ki 100.0 9.3E-39 3.2E-43 337.6 16.7 241 374-641 27-277 (342)
189 2yex_A Serine/threonine-protei 100.0 3.2E-38 1.1E-42 323.1 19.9 241 374-641 12-261 (276)
190 3mwu_A Calmodulin-domain prote 100.0 5.5E-38 1.9E-42 348.2 23.2 247 374-647 27-284 (486)
191 3nyv_A Calmodulin-domain prote 100.0 3E-38 1E-42 350.3 20.9 246 374-646 31-288 (484)
192 3q60_A ROP5B; pseudokinase, tr 100.0 6.4E-39 2.2E-43 343.3 14.9 247 374-641 67-352 (371)
193 4aaa_A Cyclin-dependent kinase 100.0 2.3E-38 7.8E-43 333.5 18.5 251 374-641 30-306 (331)
194 3com_A Serine/threonine-protei 100.0 6.2E-38 2.1E-42 327.4 21.4 240 374-641 34-278 (314)
195 3kvw_A DYRK2, dual specificity 100.0 8.9E-38 3E-42 340.5 23.3 189 374-571 102-300 (429)
196 2vwi_A Serine/threonine-protei 100.0 1.1E-38 3.9E-43 331.0 15.5 251 374-641 20-287 (303)
197 3lij_A Calcium/calmodulin depe 100.0 4.4E-38 1.5E-42 349.6 21.0 246 374-646 42-298 (494)
198 3an0_A Dual specificity mitoge 100.0 5E-38 1.7E-42 332.1 20.4 255 374-651 56-322 (340)
199 1phk_A Phosphorylase kinase; g 100.0 9.5E-38 3.3E-42 323.4 22.1 242 374-641 22-283 (298)
200 1ua2_A CAK, cell division prot 100.0 2.8E-38 9.6E-43 335.0 17.9 252 374-642 15-292 (346)
201 2xrw_A Mitogen-activated prote 100.0 1.1E-37 3.7E-42 333.7 22.4 248 374-641 30-318 (371)
202 3fme_A Dual specificity mitoge 100.0 5.7E-38 2E-42 323.6 19.6 252 374-648 12-275 (290)
203 3i6u_A CDS1, serine/threonine- 100.0 4.2E-38 1.4E-42 342.2 19.5 243 373-641 139-399 (419)
204 2i6l_A Mitogen-activated prote 100.0 6.6E-38 2.2E-42 327.7 20.3 249 374-641 16-305 (320)
205 3rp9_A Mitogen-activated prote 100.0 4.6E-38 1.6E-42 346.3 20.0 184 374-567 58-281 (458)
206 2r3i_A Cell division protein k 100.0 8.2E-38 2.8E-42 324.1 20.5 252 374-641 8-283 (299)
207 3mi9_A Cell division protein k 100.0 9.9E-38 3.4E-42 331.4 20.9 254 374-641 22-311 (351)
208 3pg1_A Mitogen-activated prote 100.0 6E-38 2.1E-42 334.5 19.0 251 374-641 27-316 (362)
209 3sv0_A Casein kinase I-like; t 100.0 1.4E-37 4.7E-42 342.4 22.1 254 374-651 12-281 (483)
210 3pfq_A PKC-B, PKC-beta, protei 100.0 9.7E-38 3.3E-42 358.0 21.7 238 374-641 346-597 (674)
211 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.2E-38 4.1E-43 333.6 12.7 247 374-650 38-304 (319)
212 3rgf_A Cyclin-dependent kinase 100.0 4.9E-38 1.7E-42 340.5 17.9 191 374-571 26-237 (405)
213 2pml_X PFPK7, Ser/Thr protein 100.0 4.8E-38 1.6E-42 333.3 17.2 253 374-641 36-322 (348)
214 3q5i_A Protein kinase; CDPK, m 100.0 1.1E-37 3.7E-42 347.3 20.7 246 374-646 41-308 (504)
215 3nsz_A CK II alpha, casein kin 100.0 1.6E-37 5.5E-42 326.7 20.9 183 374-571 41-232 (330)
216 2wtk_C Serine/threonine-protei 100.0 1.6E-37 5.5E-42 322.8 20.7 240 374-642 10-264 (305)
217 3n9x_A Phosphotransferase; mal 100.0 2.3E-37 7.8E-42 337.8 22.7 188 374-571 31-253 (432)
218 2x7f_A TRAF2 and NCK-interacti 100.0 1.8E-37 6.1E-42 325.7 21.0 241 374-641 29-286 (326)
219 2fst_X Mitogen-activated prote 100.0 1.5E-37 5.3E-42 331.6 20.6 249 374-641 34-311 (367)
220 1wak_A Serine/threonine-protei 100.0 1.8E-37 6.1E-42 334.7 21.1 258 374-641 42-391 (397)
221 2wei_A Calmodulin-domain prote 100.0 3.8E-37 1.3E-41 317.3 22.4 247 373-646 26-283 (287)
222 1z57_A Dual specificity protei 100.0 2.9E-37 9.9E-42 325.4 22.0 253 374-641 19-328 (339)
223 3eb0_A Putative uncharacterize 100.0 1.2E-37 4E-42 334.9 18.4 256 374-648 12-330 (383)
224 3qyz_A Mitogen-activated prote 100.0 2.4E-37 8.1E-42 330.2 20.6 252 374-641 32-313 (364)
225 4exu_A Mitogen-activated prote 100.0 3.8E-37 1.3E-41 329.4 22.2 248 374-641 47-323 (371)
226 4e7w_A Glycogen synthase kinas 100.0 1.3E-37 4.6E-42 335.5 18.8 256 374-647 45-329 (394)
227 1zy4_A Serine/threonine-protei 100.0 4.1E-37 1.4E-41 318.9 21.7 240 374-641 11-283 (303)
228 1j1b_A Glycogen synthase kinas 100.0 1.1E-37 3.9E-42 338.9 18.3 257 374-648 59-345 (420)
229 2ycf_A Serine/threonine-protei 100.0 2.3E-37 8E-42 324.4 19.6 243 373-641 14-274 (322)
230 2vx3_A Dual specificity tyrosi 100.0 5.1E-37 1.7E-41 329.8 21.8 191 374-571 59-259 (382)
231 3cek_A Dual specificity protei 100.0 3.7E-37 1.3E-41 321.5 20.1 240 374-642 33-293 (313)
232 3e3p_A Protein kinase, putativ 100.0 2.8E-37 9.7E-42 328.9 19.2 262 374-648 28-323 (360)
233 2b9h_A MAP kinase FUS3, mitoge 100.0 4.2E-37 1.4E-41 326.6 20.4 255 374-647 16-313 (353)
234 1blx_A Cyclin-dependent kinase 100.0 4.8E-37 1.6E-41 322.4 20.0 252 374-641 16-296 (326)
235 3coi_A Mitogen-activated prote 100.0 4.2E-37 1.4E-41 326.8 19.7 248 374-641 29-305 (353)
236 3fhr_A MAP kinase-activated pr 100.0 3.1E-37 1E-41 325.6 17.4 248 374-645 34-293 (336)
237 2rio_A Serine/threonine-protei 100.0 5.1E-37 1.7E-41 335.2 19.5 244 374-641 20-295 (434)
238 3aln_A Dual specificity mitoge 100.0 6.4E-37 2.2E-41 321.8 19.4 249 374-641 27-285 (327)
239 3p23_A Serine/threonine-protei 100.0 1.4E-36 4.9E-41 330.8 21.7 238 374-641 29-283 (432)
240 1q8y_A SR protein kinase; tran 100.0 1.3E-36 4.4E-41 325.3 20.7 258 374-641 24-333 (373)
241 2eu9_A Dual specificity protei 100.0 2.2E-36 7.6E-41 320.9 21.1 254 374-641 24-333 (355)
242 3a99_A Proto-oncogene serine/t 100.0 1.8E-37 6.2E-42 325.1 12.4 232 374-641 48-293 (320)
243 2iwi_A Serine/threonine-protei 100.0 2E-37 7E-42 323.3 12.7 232 374-641 36-283 (312)
244 2dyl_A Dual specificity mitoge 100.0 2.1E-36 7.2E-41 316.2 20.3 254 374-652 30-296 (318)
245 2pzi_A Probable serine/threoni 100.0 1.4E-36 4.8E-41 350.4 17.0 234 374-647 85-327 (681)
246 3uqc_A Probable conserved tran 100.0 8.1E-36 2.8E-40 307.2 20.9 238 374-660 36-277 (286)
247 3qa8_A MGC80376 protein; kinas 100.0 1.3E-36 4.4E-41 342.0 13.2 265 373-650 18-311 (676)
248 3dzo_A Rhoptry kinase domain; 100.0 1.9E-35 6.4E-40 320.7 14.7 237 374-641 83-363 (413)
249 3m2w_A MAP kinase-activated pr 100.0 7.6E-35 2.6E-39 302.0 17.9 225 375-646 24-263 (299)
250 2vuw_A Serine/threonine-protei 100.0 5.7E-35 1.9E-39 308.2 9.7 235 372-640 23-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 1.1E-29 3.6E-34 285.2 7.6 183 375-570 240-438 (569)
252 1ogq_A PGIP-2, polygalacturona 99.9 3.2E-26 1.1E-30 238.7 16.0 182 2-190 6-198 (313)
253 3en9_A Glycoprotease, O-sialog 99.9 2.3E-26 7.8E-31 256.7 9.5 178 374-571 341-539 (540)
254 3rgz_A Protein brassinosteroid 99.9 3.7E-24 1.3E-28 250.2 12.9 176 2-184 12-218 (768)
255 4ecn_A Leucine-rich repeat pro 99.9 1.9E-23 6.6E-28 243.7 12.2 184 2-197 269-583 (876)
256 4eco_A Uncharacterized protein 99.9 1.1E-22 3.8E-27 232.5 12.9 178 2-190 30-330 (636)
257 1zar_A RIO2 kinase; serine kin 99.9 7.5E-23 2.6E-27 209.4 8.8 140 374-543 95-252 (282)
258 3rgz_A Protein brassinosteroid 99.9 1.2E-21 4E-26 229.1 13.4 165 45-212 514-751 (768)
259 4fcg_A Uncharacterized protein 99.8 2E-20 6.7E-25 196.1 7.2 183 2-198 27-240 (328)
260 1zth_A RIO1 serine protein kin 99.8 6.1E-19 2.1E-23 178.1 10.6 134 374-525 52-220 (258)
261 1ogq_A PGIP-2, polygalacturona 99.8 1.1E-18 3.9E-23 181.5 11.7 160 46-209 126-312 (313)
262 3m19_A Variable lymphocyte rec 99.7 1.8E-17 6.1E-22 166.6 12.6 153 46-202 36-194 (251)
263 2v70_A SLIT-2, SLIT homolog 2 99.7 4.3E-17 1.5E-21 160.4 12.2 146 35-183 11-170 (220)
264 3e6j_A Variable lymphocyte rec 99.7 1E-16 3.5E-21 158.7 12.8 153 21-183 10-176 (229)
265 2o6s_A Variable lymphocyte rec 99.7 1.1E-16 3.7E-21 156.0 12.7 145 35-183 7-165 (208)
266 2v9t_B SLIT homolog 2 protein 99.7 1.4E-16 4.9E-21 156.6 12.7 142 35-180 11-166 (220)
267 2xot_A Amphoterin-induced prot 99.7 1.8E-16 6.2E-21 168.2 11.5 164 35-203 18-205 (361)
268 1w8a_A SLIT protein; signaling 99.7 6.1E-17 2.1E-21 155.7 6.4 149 49-204 12-166 (192)
269 2v70_A SLIT-2, SLIT homolog 2 99.6 5.6E-16 1.9E-20 152.4 12.7 155 39-203 8-169 (220)
270 3rfs_A Internalin B, repeat mo 99.6 2.1E-15 7E-20 153.4 14.6 153 45-203 63-221 (272)
271 3e6j_A Variable lymphocyte rec 99.6 1.9E-15 6.4E-20 149.6 13.6 156 37-203 14-175 (229)
272 4fcg_A Uncharacterized protein 99.6 4.7E-16 1.6E-20 162.7 9.6 148 45-199 127-289 (328)
273 1w8a_A SLIT protein; signaling 99.6 1.1E-15 3.7E-20 146.9 11.0 165 35-202 8-185 (192)
274 2v9t_B SLIT homolog 2 protein 99.6 1.8E-15 6.3E-20 148.7 12.4 155 39-203 8-168 (220)
275 4g8a_A TOLL-like receptor 4; l 99.6 1.1E-15 3.8E-20 174.2 12.5 166 19-189 12-196 (635)
276 2o6q_A Variable lymphocyte rec 99.6 3.4E-15 1.2E-19 151.6 14.3 131 46-180 38-171 (270)
277 2o6q_A Variable lymphocyte rec 99.6 1.9E-15 6.4E-20 153.5 11.8 156 35-197 5-167 (270)
278 4b8c_D Glucose-repressible alc 99.6 2.6E-16 9E-21 181.8 6.1 176 2-188 132-338 (727)
279 3j0a_A TOLL-like receptor 5; m 99.6 9.6E-16 3.3E-20 180.9 10.5 140 65-205 421-565 (844)
280 1ozn_A Reticulon 4 receptor; N 99.6 2.9E-15 9.9E-20 153.4 12.0 153 47-202 82-240 (285)
281 3v47_A TOLL-like receptor 5B a 99.6 1.8E-15 6.1E-20 165.6 11.0 152 34-189 7-177 (455)
282 1p9a_G Platelet glycoprotein I 99.6 6.2E-15 2.1E-19 151.3 14.2 153 46-203 32-211 (290)
283 2o6s_A Variable lymphocyte rec 99.6 9.3E-16 3.2E-20 149.3 7.5 138 45-191 52-190 (208)
284 4gyi_A RIO2 kinase; protein ki 99.6 2E-15 6.8E-20 158.6 10.0 136 373-525 99-266 (397)
285 3oja_B Anopheles plasmodium-re 99.6 4.7E-15 1.6E-19 168.2 13.8 174 19-197 8-202 (597)
286 2z81_A CD282 antigen, TOLL-lik 99.6 1.9E-15 6.6E-20 169.5 10.0 151 35-190 4-172 (549)
287 3vq2_A TLR4, TOLL-like recepto 99.6 2.9E-15 9.9E-20 170.2 10.6 155 46-204 400-562 (606)
288 3m19_A Variable lymphocyte rec 99.6 7.6E-15 2.6E-19 147.3 12.3 133 45-181 59-194 (251)
289 3rfs_A Internalin B, repeat mo 99.6 8.3E-15 2.8E-19 148.9 12.5 135 45-183 85-222 (272)
290 3cvr_A Invasion plasmid antige 99.6 4.9E-16 1.7E-20 173.4 3.2 156 20-197 33-190 (571)
291 4glp_A Monocyte differentiatio 99.6 1.5E-15 5.1E-20 157.5 6.6 149 46-198 146-305 (310)
292 2z66_A Variable lymphocyte rec 99.6 4.9E-15 1.7E-19 153.3 9.8 153 47-202 103-263 (306)
293 2o6r_A Variable lymphocyte rec 99.6 1.1E-14 3.7E-19 137.9 11.1 132 35-183 7-141 (177)
294 4eco_A Uncharacterized protein 99.6 2.7E-15 9.2E-20 171.3 7.6 135 56-197 194-363 (636)
295 2z80_A TOLL-like receptor 2, v 99.6 8.1E-15 2.8E-19 154.9 10.7 148 36-189 31-197 (353)
296 3o6n_A APL1; leucine-rich repe 99.5 2E-14 6.9E-19 154.0 12.3 173 20-197 3-196 (390)
297 1ozn_A Reticulon 4 receptor; N 99.5 3.6E-14 1.2E-18 145.1 13.6 148 46-197 33-187 (285)
298 2z66_A Variable lymphocyte rec 99.5 8.9E-15 3E-19 151.3 8.5 149 35-188 7-173 (306)
299 2z62_A TOLL-like receptor 4, v 99.5 2.5E-14 8.6E-19 145.6 11.6 155 45-203 52-240 (276)
300 3v47_A TOLL-like receptor 5B a 99.5 3.1E-14 1.1E-18 155.7 12.4 157 45-204 212-412 (455)
301 3zyj_A Leucine-rich repeat-con 99.5 4.2E-14 1.4E-18 154.2 12.3 155 46-204 113-296 (440)
302 1p9a_G Platelet glycoprotein I 99.5 5E-14 1.7E-18 144.5 12.2 143 45-197 10-158 (290)
303 2id5_A Lingo-1, leucine rich r 99.5 4.1E-14 1.4E-18 155.8 12.4 150 36-189 12-175 (477)
304 2je0_A Acidic leucine-rich nuc 99.5 8.6E-15 2.9E-19 134.3 5.6 124 46-174 18-148 (149)
305 4ezg_A Putative uncharacterize 99.5 2.6E-14 9E-19 137.8 9.2 147 45-198 44-192 (197)
306 4g8a_A TOLL-like receptor 4; l 99.5 2.1E-14 7.3E-19 163.6 9.9 157 46-203 421-583 (635)
307 2ell_A Acidic leucine-rich nuc 99.5 1.7E-14 5.7E-19 135.3 7.4 130 45-179 24-160 (168)
308 3t6q_A CD180 antigen; protein- 99.5 2.6E-14 9E-19 162.3 10.4 135 66-203 421-563 (606)
309 3zyi_A Leucine-rich repeat-con 99.5 5.9E-14 2E-18 153.5 12.6 155 46-204 124-307 (452)
310 2z62_A TOLL-like receptor 4, v 99.5 5E-14 1.7E-18 143.4 11.2 139 46-188 29-171 (276)
311 3j0a_A TOLL-like receptor 5; m 99.5 3E-14 1E-18 168.0 10.8 150 34-187 13-169 (844)
312 1wwl_A Monocyte differentiatio 99.5 1.4E-14 4.7E-19 150.4 7.0 148 45-197 121-284 (312)
313 4ecn_A Leucine-rich repeat pro 99.5 1.3E-14 4.6E-19 169.3 6.8 147 45-198 448-630 (876)
314 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 3.4E-14 1.2E-18 159.9 9.7 152 45-203 353-513 (562)
315 3oja_A Leucine-rich immune mol 99.5 2.9E-14 9.9E-19 157.3 8.9 148 45-197 58-224 (487)
316 2z7x_B TOLL-like receptor 1, v 99.5 2.7E-14 9.3E-19 159.1 8.3 151 45-202 324-483 (520)
317 3zyi_A Leucine-rich repeat-con 99.5 1.2E-13 4.3E-18 150.9 13.3 140 36-179 55-209 (452)
318 1ziw_A TOLL-like receptor 3; i 99.5 6.5E-14 2.2E-18 161.4 11.6 138 45-186 25-165 (680)
319 3vq2_A TLR4, TOLL-like recepto 99.5 6.9E-14 2.4E-18 158.8 11.3 140 45-188 32-175 (606)
320 2wfh_A SLIT homolog 2 protein 99.5 1.3E-13 4.3E-18 132.5 11.3 124 50-181 15-141 (193)
321 3oja_A Leucine-rich immune mol 99.5 2.3E-14 7.9E-19 158.1 6.7 130 68-202 118-252 (487)
322 4b8c_D Glucose-repressible alc 99.5 5.6E-15 1.9E-19 170.6 1.8 139 45-191 224-366 (727)
323 3t6q_A CD180 antigen; protein- 99.5 1.2E-13 4.1E-18 156.9 12.6 143 45-191 33-178 (606)
324 2xwt_C Thyrotropin receptor; s 99.5 1.3E-13 4.5E-18 137.1 10.9 134 45-185 31-174 (239)
325 2z63_A TOLL-like receptor 4, v 99.5 1.3E-13 4.5E-18 155.2 11.7 152 46-202 374-533 (570)
326 1wwl_A Monocyte differentiatio 99.5 3.1E-14 1E-18 147.8 5.5 153 45-198 95-264 (312)
327 4ezg_A Putative uncharacterize 99.4 2E-13 6.8E-18 131.5 10.4 129 45-180 66-195 (197)
328 1ziw_A TOLL-like receptor 3; i 99.4 3.2E-13 1.1E-17 155.6 12.7 138 65-204 475-626 (680)
329 1xku_A Decorin; proteoglycan, 99.4 7.7E-13 2.6E-17 138.2 13.7 138 35-179 31-184 (330)
330 2wfh_A SLIT homolog 2 protein 99.4 4E-13 1.4E-17 129.0 10.6 120 35-159 10-141 (193)
331 2xwt_C Thyrotropin receptor; s 99.4 1.2E-13 4E-18 137.5 6.8 147 45-198 55-216 (239)
332 3oja_B Anopheles plasmodium-re 99.4 3.6E-13 1.2E-17 152.6 11.7 137 45-186 75-213 (597)
333 2z63_A TOLL-like receptor 4, v 99.4 2.8E-13 9.6E-18 152.5 10.6 137 45-184 396-536 (570)
334 3o53_A Protein LRIM1, AGAP0063 99.4 2.1E-13 7.2E-18 141.8 8.6 132 45-180 58-205 (317)
335 4glp_A Monocyte differentiatio 99.4 4.5E-14 1.5E-18 146.4 2.6 138 47-186 93-244 (310)
336 2id5_A Lingo-1, leucine rich r 99.4 3.6E-13 1.2E-17 148.2 9.9 157 45-203 152-336 (477)
337 2z7x_B TOLL-like receptor 1, v 99.4 3.9E-13 1.3E-17 149.7 10.0 138 45-190 21-164 (520)
338 2z80_A TOLL-like receptor 2, v 99.4 3.1E-13 1.1E-17 142.7 8.6 130 47-180 102-236 (353)
339 3o6n_A APL1; leucine-rich repe 99.4 7.5E-13 2.6E-17 141.8 11.5 137 45-186 69-207 (390)
340 2xot_A Amphoterin-induced prot 99.4 9.1E-13 3.1E-17 139.6 12.0 136 39-185 15-154 (361)
341 3zyj_A Leucine-rich repeat-con 99.4 6.5E-13 2.2E-17 144.7 11.1 131 46-180 161-293 (440)
342 1dce_A Protein (RAB geranylger 99.4 5.1E-13 1.7E-17 149.6 10.5 106 71-183 442-550 (567)
343 1a9n_A U2A', U2A'; complex (nu 99.4 3.7E-13 1.3E-17 127.1 7.6 127 45-180 19-154 (176)
344 3a79_B TLR6, VLRB.59, TOLL-lik 99.4 7.6E-13 2.6E-17 148.9 11.4 137 46-190 53-195 (562)
345 1xku_A Decorin; proteoglycan, 99.4 1.3E-12 4.3E-17 136.6 12.1 136 45-188 121-261 (330)
346 2o6r_A Variable lymphocyte rec 99.4 6E-13 2E-17 125.8 8.6 114 45-162 28-142 (177)
347 2ft3_A Biglycan; proteoglycan, 99.4 1E-12 3.4E-17 137.5 11.2 155 35-197 33-203 (332)
348 2je0_A Acidic leucine-rich nuc 99.4 6E-13 2.1E-17 121.9 8.3 118 68-190 15-140 (149)
349 3g39_A Variable lymphocyte rec 99.4 1E-12 3.4E-17 123.4 9.4 104 50-160 14-118 (170)
350 1ds9_A Outer arm dynein; leuci 99.4 1.2E-14 4E-19 140.4 -4.4 133 45-184 18-158 (198)
351 2ell_A Acidic leucine-rich nuc 99.4 1.6E-12 5.3E-17 121.7 10.3 112 67-183 21-137 (168)
352 3cvr_A Invasion plasmid antige 99.4 1.4E-12 4.9E-17 145.4 11.6 118 45-184 80-197 (571)
353 3bz5_A Internalin-J, INLJ; leu 99.4 8.1E-13 2.8E-17 144.4 9.4 139 45-198 148-297 (457)
354 1h6u_A Internalin H; cell adhe 99.4 1.5E-12 5E-17 134.8 10.8 126 45-181 63-188 (308)
355 1dce_A Protein (RAB geranylger 99.4 1.4E-12 4.7E-17 146.1 11.0 128 65-198 404-544 (567)
356 1h6t_A Internalin B; cell adhe 99.4 1.6E-12 5.6E-17 133.3 10.7 124 46-180 69-192 (291)
357 1m9s_A Internalin B; cell inva 99.4 2.4E-12 8.2E-17 145.1 12.9 142 44-198 64-208 (605)
358 3o53_A Protein LRIM1, AGAP0063 99.4 1E-12 3.5E-17 136.6 8.9 130 68-202 118-252 (317)
359 2r9u_A Variable lymphocyte rec 99.3 1.8E-12 6.2E-17 122.1 9.5 106 48-160 15-121 (174)
360 2z81_A CD282 antigen, TOLL-lik 99.3 3.2E-12 1.1E-16 143.2 12.3 141 40-189 2-147 (549)
361 2ft3_A Biglycan; proteoglycan, 99.3 3.6E-12 1.2E-16 133.3 11.7 145 45-197 78-227 (332)
362 3g39_A Variable lymphocyte rec 99.3 4.5E-12 1.5E-16 119.0 11.1 107 72-183 11-119 (170)
363 1xeu_A Internalin C; cellular 99.3 3.6E-12 1.2E-16 128.6 11.1 125 45-181 41-165 (263)
364 1xeu_A Internalin C; cellular 99.3 4.7E-12 1.6E-16 127.8 11.2 125 44-181 62-187 (263)
365 1h6u_A Internalin H; cell adhe 99.3 4.5E-12 1.5E-16 131.1 11.3 141 45-198 85-228 (308)
366 1h6t_A Internalin B; cell adhe 99.3 6.4E-12 2.2E-16 128.8 11.9 127 45-183 46-173 (291)
367 1jl5_A Outer protein YOPM; leu 99.3 5.8E-12 2E-16 137.5 11.1 136 45-197 131-267 (454)
368 1o6v_A Internalin A; bacterial 99.3 5E-12 1.7E-16 138.7 10.4 144 45-199 243-387 (466)
369 1m9s_A Internalin B; cell inva 99.3 5.4E-12 1.8E-16 142.2 10.7 126 44-181 86-212 (605)
370 2ast_B S-phase kinase-associat 99.3 5.4E-13 1.8E-17 139.6 1.6 145 36-187 38-191 (336)
371 2r9u_A Variable lymphocyte rec 99.3 1.4E-11 4.6E-16 116.1 11.1 105 73-182 15-121 (174)
372 3bz5_A Internalin-J, INLJ; leu 99.3 9.7E-12 3.3E-16 135.9 11.6 121 45-180 106-226 (457)
373 4fmz_A Internalin; leucine ric 99.3 6.7E-12 2.3E-16 132.0 8.7 143 45-198 199-344 (347)
374 1o6v_A Internalin A; bacterial 99.3 1.1E-11 3.9E-16 135.9 10.8 141 45-198 221-364 (466)
375 1a9n_A U2A', U2A'; complex (nu 99.3 9.5E-12 3.2E-16 117.4 8.7 113 66-185 15-131 (176)
376 4fmz_A Internalin; leucine ric 99.3 1.3E-11 4.5E-16 129.7 10.6 142 45-198 177-322 (347)
377 2ifg_A High affinity nerve gro 99.2 1.7E-11 5.7E-16 129.0 10.2 106 35-157 8-116 (347)
378 3tm0_A Aminoglycoside 3'-phosp 99.2 3.8E-11 1.3E-15 120.9 12.0 137 375-522 20-212 (263)
379 3g06_A SSPH2 (leucine-rich rep 99.2 5.5E-12 1.9E-16 142.4 5.2 144 20-189 12-163 (622)
380 1jl5_A Outer protein YOPM; leu 99.2 3.3E-11 1.1E-15 131.6 11.2 100 71-183 132-231 (454)
381 4ay9_X Follicle-stimulating ho 99.2 2.6E-11 8.7E-16 127.8 9.0 145 35-184 9-171 (350)
382 2ca6_A RAN GTPase-activating p 99.2 4.5E-12 1.5E-16 135.5 2.8 152 44-198 121-314 (386)
383 2ca6_A RAN GTPase-activating p 99.2 3E-12 1E-16 136.8 0.9 154 44-198 93-285 (386)
384 2ifg_A High affinity nerve gro 99.2 5.1E-11 1.7E-15 125.3 10.1 104 74-181 12-118 (347)
385 2ast_B S-phase kinase-associat 99.2 5.7E-12 1.9E-16 131.8 1.6 149 45-198 70-233 (336)
386 3g06_A SSPH2 (leucine-rich rep 99.1 1.1E-10 3.9E-15 131.6 10.2 112 70-198 181-295 (622)
387 3goz_A Leucine-rich repeat-con 99.1 3.8E-11 1.3E-15 127.1 4.3 139 46-185 23-186 (362)
388 3goz_A Leucine-rich repeat-con 99.1 6.1E-11 2.1E-15 125.5 5.7 133 46-180 52-210 (362)
389 1nd4_A Aminoglycoside 3'-phosp 99.1 1.8E-10 6.2E-15 115.5 8.6 129 378-522 29-213 (264)
390 1ds9_A Outer arm dynein; leuci 99.0 4.5E-12 1.5E-16 122.1 -6.0 126 66-198 14-151 (198)
391 3dxp_A Putative acyl-COA dehyd 99.0 7.1E-10 2.4E-14 117.1 9.8 142 375-524 44-249 (359)
392 4ay9_X Follicle-stimulating ho 99.0 1E-09 3.4E-14 115.6 9.6 134 41-183 8-145 (350)
393 3sg8_A APH(2'')-ID; antibiotic 99.0 6.2E-10 2.1E-14 114.7 7.3 182 375-571 26-288 (304)
394 1z7x_W Ribonuclease inhibitor; 98.9 2.5E-10 8.6E-15 124.7 1.7 134 46-181 4-157 (461)
395 1z7x_W Ribonuclease inhibitor; 98.9 3.1E-10 1.1E-14 124.0 0.3 151 45-197 227-408 (461)
396 3rw6_A Nuclear RNA export fact 98.8 4E-11 1.4E-15 119.9 -6.9 143 36-183 79-237 (267)
397 3un9_A NLR family member X1; l 98.8 7.4E-10 2.5E-14 117.3 -0.8 41 117-157 180-224 (372)
398 3un9_A NLR family member X1; l 98.6 2.6E-09 8.7E-14 113.2 -2.8 150 45-198 72-250 (372)
399 3r70_A Aminoglycoside phosphot 98.6 2.3E-07 7.9E-12 96.1 12.0 133 375-524 43-238 (320)
400 3ogk_B Coronatine-insensitive 98.5 2.6E-08 9.1E-13 112.3 3.3 112 66-180 374-502 (592)
401 3d1u_A Putative fructosamine-3 98.5 4.2E-07 1.4E-11 92.5 9.8 141 375-521 21-214 (288)
402 3rw6_A Nuclear RNA export fact 98.4 2.1E-08 7E-13 100.2 -1.2 102 66-172 137-257 (267)
403 3tdw_A Gentamicin resistance p 98.4 2.1E-06 7.1E-11 88.2 13.5 136 375-523 25-224 (306)
404 3sb4_A Hypothetical leucine ri 98.4 5.1E-07 1.7E-11 93.8 8.9 130 45-180 101-311 (329)
405 3ovc_A Hygromycin-B 4-O-kinase 98.3 3.5E-06 1.2E-10 88.7 11.2 143 375-524 47-244 (362)
406 3ogk_B Coronatine-insensitive 98.2 1.2E-07 4.2E-12 106.8 -0.4 132 46-180 319-477 (592)
407 4gkh_A Aminoglycoside 3'-phosp 98.2 5.4E-06 1.8E-10 83.3 11.7 134 377-522 32-222 (272)
408 1io0_A Tropomodulin; LRR prote 98.1 5.2E-07 1.8E-11 85.4 1.7 112 65-179 31-164 (185)
409 2p1m_B Transport inhibitor res 98.1 4.4E-07 1.5E-11 102.2 1.0 108 68-179 370-494 (594)
410 3ats_A Putative uncharacterize 98.1 3E-06 1E-10 88.9 6.6 79 375-453 26-121 (357)
411 2p1m_B Transport inhibitor res 98.1 1.5E-06 5.2E-11 97.8 4.5 117 66-187 101-232 (594)
412 2q83_A YTAA protein; 2635576, 98.0 3.2E-05 1.1E-09 80.3 12.6 142 376-522 39-251 (346)
413 2olc_A MTR kinase, methylthior 97.9 5E-05 1.7E-09 80.9 11.8 74 375-450 36-120 (397)
414 3sb4_A Hypothetical leucine ri 97.9 1.7E-05 5.9E-10 82.2 7.4 99 68-172 224-327 (329)
415 2pyw_A Uncharacterized protein 97.8 6.4E-05 2.2E-09 80.7 11.4 75 492-567 231-313 (420)
416 1io0_A Tropomodulin; LRR prote 97.8 4.6E-06 1.6E-10 78.8 1.3 110 44-157 35-164 (185)
417 2ra8_A Uncharacterized protein 97.6 5.1E-05 1.8E-09 79.5 6.5 131 45-181 139-294 (362)
418 3jr1_A Putative fructosamine-3 97.6 0.00019 6.5E-09 73.4 10.6 140 375-519 42-232 (312)
419 3f7w_A Putative fructosamine-3 97.6 0.00026 8.8E-09 71.7 10.8 74 375-452 21-97 (288)
420 2ra8_A Uncharacterized protein 97.5 2.9E-05 9.9E-10 81.4 2.5 131 45-181 172-322 (362)
421 4fdw_A Leucine rich hypothetic 97.4 0.00053 1.8E-08 72.9 10.8 123 47-179 159-284 (401)
422 1zyl_A Hypothetical protein YI 97.3 0.0016 5.6E-08 66.9 13.1 143 377-523 34-223 (328)
423 4fdw_A Leucine rich hypothetic 97.3 0.00058 2E-08 72.6 8.8 124 46-179 227-358 (401)
424 2ppq_A HSK, HK, homoserine kin 97.2 0.0013 4.5E-08 67.4 11.1 145 375-522 28-216 (322)
425 3csv_A Aminoglycoside phosphot 97.0 0.0031 1E-07 65.1 11.2 143 376-523 25-217 (333)
426 3rfe_A Platelet glycoprotein I 96.9 0.00099 3.4E-08 58.6 5.6 56 74-133 12-68 (130)
427 3feg_A Choline/ethanolamine ki 96.9 0.0033 1.1E-07 66.0 10.5 142 376-522 57-253 (379)
428 3dxq_A Choline/ethanolamine ki 96.9 0.0013 4.4E-08 66.9 7.3 140 375-523 24-202 (301)
429 1nw1_A Choline kinase (49.2 KD 96.9 0.0038 1.3E-07 66.9 10.7 71 375-451 79-158 (429)
430 3c5i_A Choline kinase; choline 96.8 0.0016 5.6E-08 68.3 6.9 71 376-451 40-120 (369)
431 2qg7_A Ethanolamine kinase PV0 96.6 0.011 3.8E-07 63.7 11.9 73 375-452 114-188 (458)
432 3rfe_A Platelet glycoprotein I 96.5 0.0023 8E-08 56.1 5.1 57 98-157 11-68 (130)
433 3i1a_A Spectinomycin phosphotr 96.4 0.0081 2.8E-07 62.1 8.8 31 493-523 206-236 (339)
434 2yle_A Protein spire homolog 1 96.1 0.069 2.4E-06 50.6 12.7 104 449-569 32-135 (229)
435 3e4g_A ATP synthase subunit S, 96.0 0.0024 8.2E-08 59.0 2.1 12 142-153 137-148 (176)
436 1pgv_A TMD-1, tropomodulin TMD 95.7 0.0034 1.1E-07 59.1 2.0 112 65-179 36-170 (197)
437 3f2s_A CK, chetk-alpha, cholin 95.4 0.059 2E-06 56.7 10.4 142 377-522 60-279 (401)
438 3e4g_A ATP synthase subunit S, 95.4 0.0064 2.2E-07 56.1 2.5 82 95-177 61-150 (176)
439 4gt6_A Cell surface protein; l 95.0 0.058 2E-06 56.8 9.0 109 61-178 256-369 (394)
440 4gt6_A Cell surface protein; l 94.7 0.1 3.5E-06 54.8 10.0 76 95-175 265-343 (394)
441 1pgv_A TMD-1, tropomodulin TMD 94.3 0.019 6.6E-07 53.9 2.9 81 95-176 41-136 (197)
442 3mes_A Choline kinase; malaria 94.1 0.08 2.7E-06 56.2 7.3 141 376-522 77-290 (424)
443 4h09_A Hypothetical leucine ri 93.7 0.11 3.7E-06 54.3 7.5 131 47-196 219-354 (379)
444 4fs7_A Uncharacterized protein 93.5 0.15 5.2E-06 53.5 8.3 77 95-176 297-376 (394)
445 4h09_A Hypothetical leucine ri 92.3 0.22 7.6E-06 51.8 7.4 104 65-176 212-320 (379)
446 4fs7_A Uncharacterized protein 92.2 0.15 5E-06 53.7 5.9 86 62-154 289-376 (394)
447 4ann_A ESSB; membrane protein, 89.9 0.78 2.7E-05 43.3 7.7 117 423-573 43-160 (215)
448 3g15_A CK, chetk-alpha, cholin 89.4 0.65 2.2E-05 48.8 7.7 29 494-522 245-279 (401)
449 4ano_A ESSB; membrane protein, 87.2 2 6.7E-05 40.7 8.5 115 423-572 48-164 (219)
450 2ks1_B Epidermal growth factor 84.8 0.33 1.1E-05 33.0 1.3 8 296-303 32-39 (44)
451 2l2t_A Receptor tyrosine-prote 83.8 0.34 1.2E-05 32.9 1.0 8 296-303 31-38 (44)
452 3cxl_A N-chimerin; SH2, RHO-GA 78.5 0.33 1.1E-05 52.2 -0.8 59 375-436 148-215 (463)
453 2jwa_A Receptor tyrosine-prote 73.8 0.6 2.1E-05 31.6 -0.2 7 297-303 33-39 (44)
454 3ls8_A Phosphatidylinositol 3- 43.6 2.7E+02 0.0093 30.4 13.7 46 469-522 454-501 (614)
455 2ks1_B Epidermal growth factor 41.1 9 0.00031 25.9 1.0 13 295-307 28-40 (44)
456 1cja_A Protein (actin-fragmin 27.9 2.1E+02 0.0073 28.6 8.9 77 439-524 156-238 (342)
457 2x6h_A GH13170P, VPS34, phosph 27.3 6.7E+02 0.023 27.8 15.6 45 470-522 529-575 (696)
458 2lz0_A Uncharacterized protein 26.0 59 0.002 26.2 3.8 44 110-154 10-53 (100)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=3.2e-55 Score=452.08 Aligned_cols=256 Identities=22% Similarity=0.358 Sum_probs=210.1
Q ss_pred hccccCccCceeEEEEEec------CCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEec
Q 044996 373 SAEILGSGCFGSSYKASLS------TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEF 446 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey 446 (678)
..+.||+|+||+||+|++. ++..||||+++.......++|.+|+++|++++|||||+++|+|.+++..||||||
T Consensus 17 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey 96 (299)
T 4asz_A 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEY 96 (299)
T ss_dssp EEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEc
Confidence 3567999999999999863 4778999999887777788999999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhccC--------CCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeec
Q 044996 447 VPKRSLAVNLHGHQ--------ALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADY 518 (678)
Q Consensus 447 ~~~gsL~~~l~~~~--------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~Df 518 (678)
|++|+|.++|+... ......++|.++++|+.|||+||+|||++ +||||||||+||||++++.+||+||
T Consensus 97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~----~iiHRDlKp~NILl~~~~~~Ki~DF 172 (299)
T 4asz_A 97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ----HFVHRDLATRNCLVGENLLVKIGDF 172 (299)
T ss_dssp CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECGGGCEEECCC
T ss_pred CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC----CcccCccCHhhEEECCCCcEEECCc
Confidence 99999999998643 11234699999999999999999999976 7999999999999999999999999
Q ss_pred CCccccCccc------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHH
Q 044996 519 GLIPVMNQES------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVL 591 (678)
Q Consensus 519 Gla~~~~~~~------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~ 591 (678)
|+++...... ...+|+.|||||++.++.|+.|+|||||||+||||+| |+.||.. ....+.+....
T Consensus 173 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~--------~~~~~~~~~i~ 244 (299)
T 4asz_A 173 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQ--------LSNNEVIECIT 244 (299)
T ss_dssp SCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT--------SCHHHHHHHHH
T ss_pred ccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCC--------CCHHHHHHHHH
Confidence 9998654432 1236788999999999999999999999999999999 9999972 22233333332
Q ss_pred hcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCC
Q 044996 592 ANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGD 652 (678)
Q Consensus 592 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~ 652 (678)
. +... . .+......+.+++.+||+.||++||||.||++.|+++....+.
T Consensus 245 ~-~~~~-~----------~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p~ 293 (299)
T 4asz_A 245 Q-GRVL-Q----------RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASPV 293 (299)
T ss_dssp H-TCCC-C----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCC
T ss_pred c-CCCC-C----------CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCCc
Confidence 2 2111 0 1112344578888999999999999999999999999876553
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=6e-55 Score=456.22 Aligned_cols=255 Identities=23% Similarity=0.358 Sum_probs=206.0
Q ss_pred hccccCccCceeEEEEEec------CCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEec
Q 044996 373 SAEILGSGCFGSSYKASLS------TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEF 446 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey 446 (678)
..+.||+|+||+||+|++. ++..||||+++..+....++|.+|+++|++++|||||+++|+|.+.+..||||||
T Consensus 45 l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey 124 (329)
T 4aoj_A 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEY 124 (329)
T ss_dssp EEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 3567999999999999864 4788999999987777788999999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhccCCC----------CCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEe
Q 044996 447 VPKRSLAVNLHGHQAL----------GQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLA 516 (678)
Q Consensus 447 ~~~gsL~~~l~~~~~~----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~ 516 (678)
|++|+|.++|+..... ...+++|.++++|+.|||+||+|||+. +||||||||+||||++++.+||+
T Consensus 125 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~----~iiHRDLKp~NILl~~~~~~Ki~ 200 (329)
T 4aoj_A 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL----HFVHRDLATRNCLVGQGLVVKIG 200 (329)
T ss_dssp CTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEEETTTEEEEC
T ss_pred CCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC----CeecccccHhhEEECCCCcEEEc
Confidence 9999999999865321 123699999999999999999999976 79999999999999999999999
Q ss_pred ecCCccccCccc------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHH
Q 044996 517 DYGLIPVMNQES------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNS 589 (678)
Q Consensus 517 DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~ 589 (678)
|||+++.+.... ...+|+.|||||++.+..|+.++|||||||+||||+| |+.||.. ....+.+..
T Consensus 201 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~--------~~~~~~~~~ 272 (329)
T 4aoj_A 201 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ--------LSNTEAIDC 272 (329)
T ss_dssp CCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCS--------SCHHHHHHH
T ss_pred ccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCC--------CCHHHHHHH
Confidence 999998764331 2346789999999999999999999999999999999 9999972 222233332
Q ss_pred HHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCC
Q 044996 590 VLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDG 651 (678)
Q Consensus 590 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~ 651 (678)
+. .+... . .+......+.+++.+||+.||++||||.||++.|+.+.+..+
T Consensus 273 i~-~g~~~-~----------~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~pp 322 (329)
T 4aoj_A 273 IT-QGREL-E----------RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPP 322 (329)
T ss_dssp HH-HTCCC-C----------CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSCC
T ss_pred HH-cCCCC-C----------CcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCCc
Confidence 22 22111 0 111233457888899999999999999999999999987543
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.4e-54 Score=447.49 Aligned_cols=250 Identities=22% Similarity=0.347 Sum_probs=204.2
Q ss_pred ccccCccCceeEEEEEec------CCceEEEEEeccc-ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEec
Q 044996 374 AEILGSGCFGSSYKASLS------TGAMMVVKRFKQM-NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEF 446 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey 446 (678)
.+.||+|+||+||+|.+. +++.||||+++.. .....++|.+|+.+|++++|||||+++|+|.+++..+|||||
T Consensus 31 ~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey 110 (308)
T 4gt4_A 31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSY 110 (308)
T ss_dssp EEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEc
Confidence 467999999999999862 5678999999753 334567899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhccCCC-----------CCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEE
Q 044996 447 VPKRSLAVNLHGHQAL-----------GQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVL 515 (678)
Q Consensus 447 ~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl 515 (678)
|++|+|.++|+..... ....++|.++++|+.|||+||+|||+. +||||||||+||||++++.+||
T Consensus 111 ~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~----~iiHRDLK~~NILl~~~~~~Ki 186 (308)
T 4gt4_A 111 CSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH----HVVHKDLATRNVLVYDKLNVKI 186 (308)
T ss_dssp CSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECGGGCEEE
T ss_pred CCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC----CCCCCCccccceEECCCCCEEE
Confidence 9999999999754321 123599999999999999999999976 7999999999999999999999
Q ss_pred eecCCccccCccc------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHH
Q 044996 516 ADYGLIPVMNQES------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVN 588 (678)
Q Consensus 516 ~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~ 588 (678)
+|||+++.+.... ...+|+.|||||++.++.|+.++|||||||+||||+| |+.||.. ....+.+.
T Consensus 187 ~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~--------~~~~~~~~ 258 (308)
T 4gt4_A 187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG--------YSNQDVVE 258 (308)
T ss_dssp CCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT--------CCHHHHHH
T ss_pred CCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCC--------CCHHHHHH
Confidence 9999998764332 2346789999999999999999999999999999999 8999972 22233333
Q ss_pred HHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhh
Q 044996 589 SVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVK 647 (678)
Q Consensus 589 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~ 647 (678)
.+. .+... . .+..+...+.+++.+||+.||++||||.||++.|+...
T Consensus 259 ~i~-~~~~~-~----------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 259 MIR-NRQVL-P----------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp HHH-TTCCC-C----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred HHH-cCCCC-C----------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 222 22211 1 11233456788999999999999999999999998653
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-53 Score=438.85 Aligned_cols=253 Identities=22% Similarity=0.370 Sum_probs=202.1
Q ss_pred hccccCccCceeEEEEEecCCceEEEEEeccc--ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCC
Q 044996 373 SAEILGSGCFGSSYKASLSTGAMMVVKRFKQM--NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKR 450 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~g 450 (678)
..+.||+|+||+||+|++.. .||||+++.. +....+.|.+|+++|++++|||||+++|+|. ++..+||||||++|
T Consensus 40 l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVmEy~~gG 116 (307)
T 3omv_A 40 LSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGS 116 (307)
T ss_dssp EEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSC
T ss_pred EeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEEEcCCCC
Confidence 35679999999999998753 5899998743 3455678999999999999999999999885 45789999999999
Q ss_pred CHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc---
Q 044996 451 SLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE--- 527 (678)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~--- 527 (678)
+|.++|+.... .++|.++++|+.|||+||+|||+. +||||||||+||||++++.+||+|||+|+.....
T Consensus 117 sL~~~l~~~~~----~l~~~~~~~i~~qia~gL~yLH~~----~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 117 SLYKHLHVQET----KFQMFQLIDIARQTAQGMDYLHAK----NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp BHHHHHHTSCC----CCCHHHHHHHHHHHHHHHHHHHHT----TCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred CHHHHHhhcCC----CCCHHHHHHHHHHHHHHHHHHHHC----CccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 99999986532 599999999999999999999976 7999999999999999999999999999876432
Q ss_pred ---ccccccceeeCcccccc---CCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCcccccc
Q 044996 528 ---SAQELMIAYKSPEFLQL---GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVF 601 (678)
Q Consensus 528 ---~~~~~~~~y~aPE~~~~---~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 601 (678)
....||+.|||||++.+ +.|+.++|||||||+||||+||+.||.. .+-...+...+..+...
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~--------~~~~~~~~~~~~~~~~~---- 256 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSH--------INNRDQIIFMVGRGYAS---- 256 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTT--------CCCHHHHHHHHHTTCCC----
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCC--------CChHHHHHHHHhcCCCC----
Confidence 22357899999999853 4689999999999999999999999972 22233333333333211
Q ss_pred chhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCC
Q 044996 602 DKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDG 651 (678)
Q Consensus 602 d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~ 651 (678)
+.+.. ........+.+++.+||+.||++||||.||++.|+.++...+
T Consensus 257 -p~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp 303 (307)
T 3omv_A 257 -PDLSK--LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp -CCSTT--SCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred -CCccc--ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence 11111 111234567888899999999999999999999999876554
No 5
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2e-52 Score=433.87 Aligned_cols=262 Identities=20% Similarity=0.263 Sum_probs=201.1
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCC----ceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKE----EKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~----~~~lv~Ey~~~ 449 (678)
.+.||+|+||+||+|++ +|+.||||+++... .....++.|+..+.+++|||||+++|+|.+++ ..|||||||++
T Consensus 8 ~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~-~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~ 85 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE-ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEEECSSSEEEEEEE-TTEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred EEEEeeCCCeEEEEEEE-CCEEEEEEEECccc-hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCC
Confidence 46799999999999988 68999999997532 22233445666678899999999999998764 57999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhC----CCCCCcccCCCCCCEEecCCCceEEeecCCccccC
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYREL----PSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMN 525 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~----~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 525 (678)
|+|.++|+.. .++|.++++|+.|+++||+|||+++ +..+||||||||+|||||+++++||+|||+++...
T Consensus 86 gsL~~~l~~~------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 159 (303)
T 3hmm_A 86 GSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp CBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred CcHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence 9999999864 4899999999999999999999652 23479999999999999999999999999998654
Q ss_pred ccc--------cccccceeeCccccccC------CCCCcchHHHHHHHHHHHHhCCCCccccccCCC-------CCCChH
Q 044996 526 QES--------AQELMIAYKSPEFLQLG------RITKKTDVWSLGVLILEIMTGKFPANFLQQGKK-------ADGDLA 584 (678)
Q Consensus 526 ~~~--------~~~~~~~y~aPE~~~~~------~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~-------~~~~l~ 584 (678)
... ...+|+.|||||++.+. .++.|+|||||||+||||+||+.||........ .....
T Consensus 160 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~- 238 (303)
T 3hmm_A 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV- 238 (303)
T ss_dssp TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH-
T ss_pred CCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH-
Confidence 321 22478999999998754 467899999999999999999888753221110 01112
Q ss_pred HHHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhcc
Q 044996 585 SWVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKER 649 (678)
Q Consensus 585 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 649 (678)
..+....... ..++.+.......+....+.+++.+||+.||++||||.||++.|+++.+.
T Consensus 239 ~~~~~~~~~~-----~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 239 EEMRKVVCEQ-----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHTTS-----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcc-----cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 2222222221 12233322222345677889999999999999999999999999998764
No 6
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1e-51 Score=435.21 Aligned_cols=257 Identities=21% Similarity=0.304 Sum_probs=206.6
Q ss_pred hccccCccCceeEEEEEecC------CceEEEEEecccC-hhhHHHHHHHHHHHhccCC-CCccceeEEEEeC-CceEEE
Q 044996 373 SAEILGSGCFGSSYKASLST------GAMMVVKRFKQMN-NVGREEFQEHMRRLGRLRH-PNLLPLVAYYYRK-EEKLLV 443 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H-~niv~l~~~~~~~-~~~~lv 443 (678)
..+.||+|+||+||+|.+.. ++.||||+++... ....++|.+|+++|.+++| ||||+++|+|.+. +..+||
T Consensus 68 l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV 147 (353)
T 4ase_A 68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 147 (353)
T ss_dssp EEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred EeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEE
Confidence 45789999999999998642 3579999997643 3456789999999999965 8999999999764 568999
Q ss_pred EeccCCCCHHHHhhccCCC-----------CCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCc
Q 044996 444 HEFVPKRSLAVNLHGHQAL-----------GQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLE 512 (678)
Q Consensus 444 ~Ey~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~ 512 (678)
||||++|+|.++|+..... ....++|.+++.|+.|||+||+|||+. +||||||||+|||+++++.
T Consensus 148 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~----~iiHRDLK~~NILl~~~~~ 223 (353)
T 4ase_A 148 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR----KCIHRDLAARNILLSEKNV 223 (353)
T ss_dssp EECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECGGGC
T ss_pred EEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC----CeecCccCccceeeCCCCC
Confidence 9999999999999864321 123589999999999999999999976 7999999999999999999
Q ss_pred eEEeecCCccccCccc------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHH
Q 044996 513 PVLADYGLIPVMNQES------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLAS 585 (678)
Q Consensus 513 ~kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~ 585 (678)
+||+|||+|+.+.... ...+|+.|||||++.++.|+.++|||||||+||||+| |+.||.. ....+
T Consensus 224 vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~--------~~~~~ 295 (353)
T 4ase_A 224 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG--------VKIDE 295 (353)
T ss_dssp EEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT--------CCCSH
T ss_pred EEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC--------CCHHH
Confidence 9999999998764332 2246788999999999999999999999999999998 9999972 22223
Q ss_pred HHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCC
Q 044996 586 WVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGD 652 (678)
Q Consensus 586 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~ 652 (678)
.+...+.++... .. +.....++.+++.+||+.||++||||.||++.|+++.+....
T Consensus 296 ~~~~~i~~g~~~-~~----------p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~~~ 351 (353)
T 4ase_A 296 EFCRRLKEGTRM-RA----------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 351 (353)
T ss_dssp HHHHHHHHTCCC-CC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHcCCCC-CC----------CccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHhhC
Confidence 343444433221 11 112234577888899999999999999999999998765544
No 7
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=5.8e-51 Score=426.30 Aligned_cols=241 Identities=20% Similarity=0.289 Sum_probs=197.0
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEeccc--ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCC
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQM--NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKR 450 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~g 450 (678)
.+.||+|+||+||+|+. .+|+.||||+++.. .....+.|.+|+++|++|+|||||++++++.+++..|||||||++|
T Consensus 29 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg 108 (350)
T 4b9d_A 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGG 108 (350)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred eEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence 46799999999999986 46899999999753 3455678999999999999999999999999999999999999999
Q ss_pred CHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc--
Q 044996 451 SLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES-- 528 (678)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~-- 528 (678)
+|.++|...+. ..+++.++..|+.||+.||+|||++ +||||||||+||||++++.+||+|||+|+.+....
T Consensus 109 ~L~~~i~~~~~---~~~~e~~~~~~~~qi~~aL~ylH~~----~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 181 (350)
T 4b9d_A 109 DLFKRINAQKG---VLFQEDQILDWFVQICLALKHVHDR----KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL 181 (350)
T ss_dssp BHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHHT----TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHH
T ss_pred cHHHHHHHcCC---CCCCHHHHHHHHHHHHHHHHHHHHC----CeeeccCCHHHEEECCCCCEEEcccccceeecCCccc
Confidence 99999976532 2578999999999999999999976 89999999999999999999999999999876542
Q ss_pred --cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhh
Q 044996 529 --AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMA 606 (678)
Q Consensus 529 --~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~ 606 (678)
...||+.|||||++.+..|+.++|||||||+||||+||+.||. ..+..+.+.......... +
T Consensus 182 ~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~--------~~~~~~~~~~i~~~~~~~-------~- 245 (350)
T 4b9d_A 182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFE--------AGSMKNLVLKIISGSFPP-------V- 245 (350)
T ss_dssp HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCC--------CSSHHHHHHHHHHTCCCC-------C-
T ss_pred ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCC--------CcCHHHHHHHHHcCCCCC-------C-
Confidence 2347899999999999999999999999999999999999997 234445555444332110 0
Q ss_pred cccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 607 DERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 607 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.......+.+++.+||+.||++|||+.|+++
T Consensus 246 ----~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 246 ----SLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp ----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1112234677888999999999999999986
No 8
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=6.9e-51 Score=425.03 Aligned_cols=240 Identities=18% Similarity=0.233 Sum_probs=199.7
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCCH
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSL 452 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL 452 (678)
.+.||+|+||+||+|... +|+.||||+++.......+.+.+|+++|++++|||||+++++|.+++..|||||||++|+|
T Consensus 79 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 158 (346)
T 4fih_A 79 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 158 (346)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEH
T ss_pred eEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcH
Confidence 356999999999999864 6899999999765555567789999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc----c
Q 044996 453 AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE----S 528 (678)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~----~ 528 (678)
.+++... .+++.++..|+.||+.||+|||++ +||||||||+||||+.++.+||+|||+|+.+... .
T Consensus 159 ~~~l~~~------~l~e~~~~~~~~qi~~aL~ylH~~----~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 228 (346)
T 4fih_A 159 TDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQ----GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 228 (346)
T ss_dssp HHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC
T ss_pred HHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC----CcccccCCHHHEEECCCCCEEEecCcCceecCCCCCccc
Confidence 9999753 489999999999999999999976 8999999999999999999999999999876543 2
Q ss_pred cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhcc
Q 044996 529 AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMADE 608 (678)
Q Consensus 529 ~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~ 608 (678)
...||+.|||||++.+..|+.++|||||||++|||++|+.||.. .+..+.+..+...... .+..
T Consensus 229 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~--------~~~~~~~~~i~~~~~~-------~~~~- 292 (346)
T 4fih_A 229 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN--------EPPLKAMKMIRDNLPP-------RLKN- 292 (346)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT--------SCHHHHHHHHHHSSCC-------CCSC-
T ss_pred ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC--------cCHHHHHHHHHcCCCC-------CCCc-
Confidence 34588999999999999999999999999999999999999962 2333333333322111 1100
Q ss_pred cCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 609 RNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 609 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.......+.+++.+||+.||++|||+.|+++
T Consensus 293 --~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 293 --LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp --GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0111234667788999999999999999876
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.9e-50 Score=412.12 Aligned_cols=241 Identities=20% Similarity=0.333 Sum_probs=192.3
Q ss_pred cccCccCceeEEEEEec-CCceEEEEEeccc--ChhhHHHHHHHHHHHhccCCCCccceeEEEEe----CCceEEEEecc
Q 044996 375 EILGSGCFGSSYKASLS-TGAMMVVKRFKQM--NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR----KEEKLLVHEFV 447 (678)
Q Consensus 375 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~~lv~Ey~ 447 (678)
+.||+|+||+||+|... ++..||+|++... .....+.|.+|+++|++++|||||+++++|.+ ++..|||||||
T Consensus 32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~ 111 (290)
T 3fpq_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM 111 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCC
Confidence 46999999999999864 6889999998643 34456789999999999999999999999875 34589999999
Q ss_pred CCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEec-CCCceEEeecCCccccCc
Q 044996 448 PKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN-ESLEPVLADYGLIPVMNQ 526 (678)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~-~~~~~kl~DfGla~~~~~ 526 (678)
++|+|.++++... .+++..+..|+.||+.||+|||++. .+||||||||+||||+ +++.+||+|||+|+....
T Consensus 112 ~gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~ylH~~~--~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 112 TSGTLKTYLKRFK-----VMKIKVLRSWCRQILKGLQFLHTRT--PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp CSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTSS--SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred CCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--CCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 9999999998653 5899999999999999999999761 2399999999999998 489999999999986554
Q ss_pred c--ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchh
Q 044996 527 E--SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKE 604 (678)
Q Consensus 527 ~--~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 604 (678)
. ....||+.|||||++. ++|+.++|||||||+||||+||+.||.. .......... +..+... ..++
T Consensus 185 ~~~~~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~-------~~~~~~~~~~-i~~~~~~-~~~~-- 252 (290)
T 3fpq_A 185 SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSE-------CQNAAQIYRR-VTSGVKP-ASFD-- 252 (290)
T ss_dssp TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTT-------CSSHHHHHHH-HTTTCCC-GGGG--
T ss_pred CccCCcccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCC-------CCcHHHHHHH-HHcCCCC-CCCC--
Confidence 3 2335789999999886 4799999999999999999999999962 1222333322 2222111 1111
Q ss_pred hhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 605 MADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 605 l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
... ...+.+++.+||+.||++|||+.|+++
T Consensus 253 ---~~~----~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 253 ---KVA----IPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ---GCC----CHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---ccC----CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111 124677888999999999999999975
No 10
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.3e-50 Score=421.77 Aligned_cols=246 Identities=20% Similarity=0.219 Sum_probs=199.2
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCCH
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSL 452 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL 452 (678)
.++||+|+||+||+|+. .+|+.||||+++.... +.+|+.+|++++|||||++++++.+++..|||||||++|+|
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 137 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 137 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcH
Confidence 46799999999999986 4689999999975321 24699999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCC-ceEEeecCCccccCccc---
Q 044996 453 AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESL-EPVLADYGLIPVMNQES--- 528 (678)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~-~~kl~DfGla~~~~~~~--- 528 (678)
.++|+... .+++.++..|+.||+.||+|||++ +||||||||+||||+.++ .+||+|||+|+.+....
T Consensus 138 ~~~l~~~~-----~l~e~~~~~~~~qi~~aL~ylH~~----~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 138 GQLIKQMG-----CLPEDRALYYLGQALEGLEYLHTR----RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp HHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTT----TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred HHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 99998653 599999999999999999999965 899999999999999987 69999999998765431
Q ss_pred ------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccc
Q 044996 529 ------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFD 602 (678)
Q Consensus 529 ------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d 602 (678)
...||+.|||||++.+..|+.++|||||||+||||+||+.||.... ...+ +..+.......
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~-----~~~~---~~~i~~~~~~~----- 275 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF-----RGPL---CLKIASEPPPI----- 275 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTC-----CSCC---HHHHHHSCCGG-----
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC-----HHHH---HHHHHcCCCCc-----
Confidence 1247899999999999999999999999999999999999997321 1111 12222221111
Q ss_pred hhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCC
Q 044996 603 KEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDG 651 (678)
Q Consensus 603 ~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~ 651 (678)
..+ .......+.+++.+||+.||.+|||+.|+++.|..+.....
T Consensus 276 ~~~-----~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~ 319 (336)
T 4g3f_A 276 REI-----PPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVG 319 (336)
T ss_dssp GGS-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred hhc-----CccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence 011 11223456778889999999999999999999988876544
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1e-49 Score=426.27 Aligned_cols=240 Identities=19% Similarity=0.236 Sum_probs=200.0
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCCH
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSL 452 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL 452 (678)
.+.||+|+||.||+|+. .+|+.||||++........+.+.+|+++|++++|||||+++++|.+.+..|||||||++|+|
T Consensus 156 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L 235 (423)
T 4fie_A 156 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 235 (423)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred eeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcH
Confidence 45799999999999986 46899999999866555667799999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc----c
Q 044996 453 AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE----S 528 (678)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~----~ 528 (678)
.++++.. .+++.++..|+.||+.||+|||++ +||||||||+||||+.++.+||+|||+|+.+... .
T Consensus 236 ~~~i~~~------~l~e~~~~~~~~qil~aL~ylH~~----~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 305 (423)
T 4fie_A 236 TDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQ----GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 305 (423)
T ss_dssp HHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBC
T ss_pred HHHHhcc------CCCHHHHHHHHHHHHHHHHHHHHC----CeecccCCHHHEEEcCCCCEEEecCccceECCCCCcccc
Confidence 9999753 489999999999999999999976 8999999999999999999999999999876543 2
Q ss_pred cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhcc
Q 044996 529 AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMADE 608 (678)
Q Consensus 529 ~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~ 608 (678)
...||+.|||||++.+..|+.++|||||||++|||++|+.||.. .+..+.+..+...... .+...
T Consensus 306 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~--------~~~~~~~~~i~~~~~~-------~~~~~ 370 (423)
T 4fie_A 306 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN--------EPPLKAMKMIRDNLPP-------RLKNL 370 (423)
T ss_dssp CCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT--------SCHHHHHHHHHHSCCC-------CCSCT
T ss_pred ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC--------cCHHHHHHHHHcCCCC-------CCccc
Confidence 34578999999999999999999999999999999999999962 2333333333322111 11110
Q ss_pred cCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 609 RNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 609 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
......+.+++.+||+.||++|||+.|+++
T Consensus 371 ---~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 371 ---HKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp ---TSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111234667778999999999999999876
No 12
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=7.9e-49 Score=398.02 Aligned_cols=237 Identities=20% Similarity=0.293 Sum_probs=186.6
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccC---hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMN---NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.+.||+|+||+||+|+. .+++.||||+++... ....+.+.+|+++|++++|||||++++++.+++..|+||||+ +
T Consensus 18 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~ 96 (275)
T 3hyh_A 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-G 96 (275)
T ss_dssp EEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-C
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-C
Confidence 46799999999999986 468999999987532 334567999999999999999999999999999999999999 6
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc--
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE-- 527 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~-- 527 (678)
|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+.....
T Consensus 97 g~L~~~l~~~~-----~l~e~~~~~~~~qi~~al~ylH~~----~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 97 NELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCHRH----KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp EEHHHHHHHSC-----SCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CcccccCChHHeEECCCCCEEEeecCCCeecCCCCc
Confidence 89999997653 599999999999999999999976 8999999999999999999999999999876543
Q ss_pred -ccccccceeeCccccccCCC-CCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhh
Q 044996 528 -SAQELMIAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEM 605 (678)
Q Consensus 528 -~~~~~~~~y~aPE~~~~~~~-t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l 605 (678)
....||+.|||||++.+..+ +.++||||+||++|||+||+.||. ..+.....+..........
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~--------~~~~~~~~~~i~~~~~~~p------- 232 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD--------DESIPVLFKNISNGVYTLP------- 232 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSC--------CSSHHHHHHHHHHTCCCCC-------
T ss_pred cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCC--------CCCHHHHHHHHHcCCCCCC-------
Confidence 23457899999999988776 579999999999999999999996 2344444444443321110
Q ss_pred hcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 606 ADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
......+.+++.+||+.||++|||+.|+++
T Consensus 233 ------~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 233 ------KFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ------TTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ------CCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 011234567788999999999999999987
No 13
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.9e-49 Score=407.99 Aligned_cols=239 Identities=21% Similarity=0.273 Sum_probs=199.6
Q ss_pred hccccCccCceeEEEEEe-cCCceEEEEEeccc---ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccC
Q 044996 373 SAEILGSGCFGSSYKASL-STGAMMVVKRFKQM---NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVP 448 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~ 448 (678)
+.+.||+|+||+||+|+. .+++.||||++... .....+.+.+|+++|++++|||||++++++.+++..|||||||+
T Consensus 36 i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~ 115 (311)
T 4aw0_A 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAK 115 (311)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCC
Confidence 356799999999999976 56899999999743 23346789999999999999999999999999999999999999
Q ss_pred CCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc-
Q 044996 449 KRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE- 527 (678)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~- 527 (678)
+|+|.+++.... .+++.++..|+.||+.||+|||++ +|+||||||+||||++++.+||+|||+|+.+...
T Consensus 116 gG~L~~~i~~~~-----~l~e~~~~~~~~qi~~al~ylH~~----~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 116 NGELLKYIRKIG-----SFDETCTRFYTAEIVSALEYLHGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp TEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred CCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 999999998653 589999999999999999999976 8999999999999999999999999999876432
Q ss_pred -----ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccc
Q 044996 528 -----SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFD 602 (678)
Q Consensus 528 -----~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d 602 (678)
....||+.|||||++.+..|+.++||||+||+||||+||+.||. ..+..+....+.......
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~--------~~~~~~~~~~i~~~~~~~----- 253 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR--------AGNEGLIFAKIIKLEYDF----- 253 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSC--------CSSHHHHHHHHHHTCCCC-----
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC--------CCCHHHHHHHHHcCCCCC-----
Confidence 22357899999999999999999999999999999999999996 233444444444332111
Q ss_pred hhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 603 KEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 603 ~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
+.....++.+++.+||+.||++|||++|++.
T Consensus 254 --------p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 254 --------PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp --------CTTCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred --------CcccCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence 0111234667788999999999999998743
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=5e-49 Score=404.97 Aligned_cols=234 Identities=20% Similarity=0.224 Sum_probs=187.2
Q ss_pred hccccCccCceeEEEEEec----CCceEEEEEecccC--hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEec
Q 044996 373 SAEILGSGCFGSSYKASLS----TGAMMVVKRFKQMN--NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEF 446 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey 446 (678)
..+.||+|+||+||+|+.. +++.||||+++... ......+.+|+++|++++|||||++++++.+++..||||||
T Consensus 28 i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy 107 (304)
T 3ubd_A 28 LLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDF 107 (304)
T ss_dssp EEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECC
T ss_pred EEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEc
Confidence 3578999999999999752 46789999987532 23345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCc
Q 044996 447 VPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQ 526 (678)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 526 (678)
|++|+|.++|.... .+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+....
T Consensus 108 ~~gg~L~~~l~~~~-----~l~e~~~~~~~~qi~~aL~ylH~~----~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 108 LRGGDLFTRLSKEV-----MFTEEDVKFYLAELALALDHLHSL----GIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp CTTCEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred CCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 99999999998653 589999999999999999999976 899999999999999999999999999986543
Q ss_pred c----ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccc
Q 044996 527 E----SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFD 602 (678)
Q Consensus 527 ~----~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d 602 (678)
. ....||+.|||||++.+..|+.++|||||||+||||+||+.||. ..+..+.+..........
T Consensus 179 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~--------~~~~~~~~~~i~~~~~~~----- 245 (304)
T 3ubd_A 179 HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ--------GKDRKETMTMILKAKLGM----- 245 (304)
T ss_dssp --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSC--------CSSHHHHHHHHHHCCCCC-----
T ss_pred CCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCC--------CcCHHHHHHHHHcCCCCC-----
Confidence 2 23457899999999999999999999999999999999999997 234444444444332111
Q ss_pred hhhhcccCCHHHHHHHHHHHhhcCccccccCCCH
Q 044996 603 KEMADERNSEGEMVKLLKIGLACCEEEVEKRLDL 636 (678)
Q Consensus 603 ~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~ 636 (678)
+......+.+++.+||+.||++|||+
T Consensus 246 --------p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 246 --------PQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp --------CTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred --------CCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 01112346677889999999999984
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.3e-47 Score=394.01 Aligned_cols=240 Identities=20% Similarity=0.298 Sum_probs=182.2
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccC-hhhHHHHHHHHHHHhccCCCCccceeEEEEeCC------------c
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMN-NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKE------------E 439 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------------~ 439 (678)
.+.||+|+||+||+|+. .+++.||||+++... ....+.+.+|+++|++++|||||++++++.+.+ .
T Consensus 10 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~ 89 (299)
T 4g31_A 10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVY 89 (299)
T ss_dssp EEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEE
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcE
Confidence 46799999999999986 468999999987533 445678999999999999999999999987654 3
Q ss_pred eEEEEeccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecC
Q 044996 440 KLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYG 519 (678)
Q Consensus 440 ~~lv~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfG 519 (678)
.|+|||||++|+|.+++...... ...++..++.|+.||+.||+|||++ +|+||||||+||||+.++.+||+|||
T Consensus 90 l~ivmE~~~gg~L~~~l~~~~~~--~~~~~~~~~~i~~qi~~al~ylH~~----~IiHRDlKp~NILl~~~~~vKl~DFG 163 (299)
T 4g31_A 90 LYIQMQLCRKENLKDWMNGRCTI--EERERSVCLHIFLQIAEAVEFLHSK----GLMHRDLKPSNIFFTMDDVVKVGDFG 163 (299)
T ss_dssp EEEEEECCCSCCHHHHHHTCCSG--GGSCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTCCEEECCCC
T ss_pred EEEEEecCCCCcHHHHHHhcCCC--ChhHHHHHHHHHHHHHHHHHHHHHC----cCccccCcHHHeEECCCCcEEEccCc
Confidence 68999999999999999865432 2356777889999999999999976 89999999999999999999999999
Q ss_pred CccccCccc----------------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCCh
Q 044996 520 LIPVMNQES----------------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDL 583 (678)
Q Consensus 520 la~~~~~~~----------------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l 583 (678)
+|+.+.... ...||+.|||||++.+..|+.++|||||||++|||++ ||... .+.
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~-------~~~ 233 (299)
T 4g31_A 164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ-------MER 233 (299)
T ss_dssp CC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSH-------HHH
T ss_pred cceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCc-------cHH
Confidence 998765431 1247889999999999999999999999999999996 77511 011
Q ss_pred HHHHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 584 ASWVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
...+.... ... . .+.. ........+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~-~~~-~----p~~~------~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 234 VRTLTDVR-NLK-F----PPLF------TQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHHHH-TTC-C----CHHH------HHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHh-cCC-C----CCCC------cccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111111 110 0 0111 112233567888999999999999999876
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-44 Score=387.19 Aligned_cols=256 Identities=18% Similarity=0.269 Sum_probs=193.2
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEeccc--ChhhHHHHHHHHHHHhccCCCCccceeEEEEeC------CceEEEE
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQM--NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRK------EEKLLVH 444 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------~~~~lv~ 444 (678)
.+.||+|+||+||+|+. .+|+.||||+++.. .....+.+.+|+++|++++|||||++++++... +..||||
T Consensus 59 ~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivm 138 (398)
T 4b99_A 59 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVL 138 (398)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEE
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEE
Confidence 46799999999999986 57899999999753 234456789999999999999999999997643 5789999
Q ss_pred eccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCcccc
Q 044996 445 EFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM 524 (678)
Q Consensus 445 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 524 (678)
|||+ |+|.+++.... .+++.++..|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+
T Consensus 139 E~~~-g~L~~~i~~~~-----~l~~~~~~~~~~qil~al~ylH~~----~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 139 DLME-SDLHQIIHSSQ-----PLTLEHVRYFLYQLLRGLKYMHSA----QVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp ECCS-EEHHHHHTSSS-----CCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred eCCC-CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----cCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 9995 78999997643 599999999999999999999976 8999999999999999999999999999876
Q ss_pred Ccc--------ccccccceeeCccccccC-CCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhc-C
Q 044996 525 NQE--------SAQELMIAYKSPEFLQLG-RITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLAN-G 594 (678)
Q Consensus 525 ~~~--------~~~~~~~~y~aPE~~~~~-~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~-~ 594 (678)
... ....+|..|||||++.+. .++.++||||+||++|||++|+.||.. .+..+.+..+... +
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g--------~~~~~~l~~I~~~~g 280 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG--------KNYVHQLQLIMMVLG 280 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCC--------SSHHHHHHHHHHHHC
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCC--------CCHHHHHHHHHHhcC
Confidence 432 233578999999998765 569999999999999999999999962 2222222222211 1
Q ss_pred Cccccccc-----------hhhhcc-cCCH-----HHHHHHHHHHhhcCccccccCCCHHHHHH--HHHHhh
Q 044996 595 DNRTEVFD-----------KEMADE-RNSE-----GEMVKLLKIGLACCEEEVEKRLDLKEAVE--KIEEVK 647 (678)
Q Consensus 595 ~~~~~~~d-----------~~l~~~-~~~~-----~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~--~L~~i~ 647 (678)
....+... ..+... .... .....+.+++.+||..||.+|||+.|+++ .+++..
T Consensus 281 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~ 352 (398)
T 4b99_A 281 TPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYH 352 (398)
T ss_dssp CCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTC
T ss_pred CCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCC
Confidence 00000000 000000 0000 01234677888999999999999999987 355443
No 17
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.1e-43 Score=372.42 Aligned_cols=269 Identities=28% Similarity=0.489 Sum_probs=225.4
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCCHH
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLA 453 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL~ 453 (678)
.+.||+|+||.||+|...++..||||++........+.+.+|++++++++||||+++++++...+..++||||+++|+|.
T Consensus 44 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 123 (321)
T 2qkw_B 44 KFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLK 123 (321)
T ss_dssp CCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTG
T ss_pred cceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHH
Confidence 46799999999999998889999999988766666788999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc------
Q 044996 454 VNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE------ 527 (678)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~------ 527 (678)
+++..... ....++|.+++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 124 ~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~----~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 198 (321)
T 2qkw_B 124 RHLYGSDL-PTMSMSWEQRLEICIGAARGLHYLHTR----AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLS 198 (321)
T ss_dssp GGSSSSCC-CSCCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCB
T ss_pred HHHhccCC-CccccCHHHHHHHHHHHHHHHHHhcCC----CeecCCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence 99976532 223599999999999999999999976 8999999999999999999999999998764322
Q ss_pred ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhc
Q 044996 528 SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMAD 607 (678)
Q Consensus 528 ~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~ 607 (678)
....++..|+|||++.+..++.++|||||||++|||+||+.||..... ........|.......+.. .+.+++.+..
T Consensus 199 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 275 (321)
T 2qkw_B 199 TVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP--REMVNLAEWAVESHNNGQL-EQIVDPNLAD 275 (321)
T ss_dssp CCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSS--SSCCCHHHHTHHHHTTTCC-CSSSSSSCTT
T ss_pred cccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCc--HHHHHHHHHhhhccccccH-HHhcChhhcc
Confidence 122367889999999888999999999999999999999999974322 2234667776655544433 2556655533
Q ss_pred ccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCC
Q 044996 608 ERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDG 651 (678)
Q Consensus 608 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~ 651 (678)
. ...+....+.+++.+||+.||++|||+.||++.|+.+....+
T Consensus 276 ~-~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~~ 318 (321)
T 2qkw_B 276 K-IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318 (321)
T ss_dssp C-SCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSC
T ss_pred c-cCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhccc
Confidence 2 345678889999999999999999999999999999876543
No 18
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=7.6e-44 Score=400.12 Aligned_cols=244 Identities=20% Similarity=0.286 Sum_probs=201.9
Q ss_pred hccccCccCceeEEEEEe-cCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCC
Q 044996 373 SAEILGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRS 451 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gs 451 (678)
+.+.||+|+||.||+|.. .+|+.||+|++........+.+.+|+++|++++|||||+++++|.+.+..|||||||++|+
T Consensus 161 i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~ 240 (573)
T 3uto_A 161 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGE 240 (573)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCB
T ss_pred EEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCc
Confidence 356799999999999976 4789999999987666677889999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCC--CceEEeecCCccccCccc-
Q 044996 452 LAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNES--LEPVLADYGLIPVMNQES- 528 (678)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~--~~~kl~DfGla~~~~~~~- 528 (678)
|.++|..... .+++.++..|+.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+++.+....
T Consensus 241 L~~~i~~~~~----~l~e~~~~~~~~qi~~al~ylH~~----~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~ 312 (573)
T 3uto_A 241 LFEKVADEHN----KMSEDEAVEYMRQVCKGLCHMHEN----NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 312 (573)
T ss_dssp HHHHHTCTTS----CEEHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE
T ss_pred HHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHHC----CeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc
Confidence 9999965432 589999999999999999999976 89999999999999854 899999999998876542
Q ss_pred --cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhh
Q 044996 529 --AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMA 606 (678)
Q Consensus 529 --~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~ 606 (678)
...||+.|||||++.+..|+.++||||+||+||||++|+.||. +.+..+.+..+....... -++...
T Consensus 313 ~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~--------~~~~~~~~~~i~~~~~~~---~~~~~~ 381 (573)
T 3uto_A 313 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG--------GENDDETLRNVKSCDWNM---DDSAFS 381 (573)
T ss_dssp EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSC--------CSSHHHHHHHHHTTCCCC---CSGGGT
T ss_pred eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCC--------CcCHHHHHHHHHhCCCCC---Cccccc
Confidence 3357899999999999999999999999999999999999996 223334444443322111 111110
Q ss_pred cccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 607 DERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 607 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.. ...+.+++.+||+.||.+|||+.|+++
T Consensus 382 --~~----s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 382 --GI----SEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp --TS----CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --CC----CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11 234567778999999999999999987
No 19
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=5.5e-44 Score=378.70 Aligned_cols=185 Identities=20% Similarity=0.344 Sum_probs=161.3
Q ss_pred hccccCccCceeEEEEEec----CCceEEEEEecccChhhHHHHHHHHHHHhcc-CCCCccceeEEEEeCCceEEEEecc
Q 044996 373 SAEILGSGCFGSSYKASLS----TGAMMVVKRFKQMNNVGREEFQEHMRRLGRL-RHPNLLPLVAYYYRKEEKLLVHEFV 447 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~Ey~ 447 (678)
+.+.||+|+||+||+|+.+ +++.||+|++.... ...++.+|+++|+++ +|||||++++++.+.+..|+|||||
T Consensus 25 i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~ 102 (361)
T 4f9c_A 25 IEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYL 102 (361)
T ss_dssp EEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECC
T ss_pred EEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCC
Confidence 3568999999999999753 46789999987543 345688999999998 6999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCC-CceEEeecCCccccCc
Q 044996 448 PKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNES-LEPVLADYGLIPVMNQ 526 (678)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~-~~~kl~DfGla~~~~~ 526 (678)
++|+|.+++. .+++.++..++.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||+|+....
T Consensus 103 ~g~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH~~----gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~ 170 (361)
T 4f9c_A 103 EHESFLDILN--------SLSFQEVREYMLNLFKALKRIHQF----GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD 170 (361)
T ss_dssp CCCCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEEETTTTEEEECCCTTCEECTT
T ss_pred CcccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHC----CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCC
Confidence 9999999984 388999999999999999999976 89999999999999877 7999999999975432
Q ss_pred c--------------------------------ccccccceeeCccccccC-CCCCcchHHHHHHHHHHHHhCCCCcc
Q 044996 527 E--------------------------------SAQELMIAYKSPEFLQLG-RITKKTDVWSLGVLILEIMTGKFPAN 571 (678)
Q Consensus 527 ~--------------------------------~~~~~~~~y~aPE~~~~~-~~t~ksDvwS~Gvvl~el~tg~~P~~ 571 (678)
. ....||+.|||||++.+. .|+.++||||+||++|||+||+.||.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~ 248 (361)
T 4f9c_A 171 TKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY 248 (361)
T ss_dssp CSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred ccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCC
Confidence 1 112478999999999765 58999999999999999999999995
No 20
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=9.3e-44 Score=373.75 Aligned_cols=280 Identities=32% Similarity=0.563 Sum_probs=228.4
Q ss_pred ccchHHHHHH-----hccccCccCceeEEEEEecCCceEEEEEecccCh-hhHHHHHHHHHHHhccCCCCccceeEEEEe
Q 044996 363 RFDLHDLLRA-----SAEILGSGCFGSSYKASLSTGAMMVVKRFKQMNN-VGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436 (678)
Q Consensus 363 ~~~~~~~~~~-----~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~ 436 (678)
.|++.++... ..+.||+|+||.||+|+..+++.||||++..... .....+.+|++++++++||||+++++++..
T Consensus 19 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 98 (326)
T 3uim_A 19 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT 98 (326)
T ss_dssp ECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECC
T ss_pred eecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEec
Confidence 4455554433 2467999999999999988899999999875432 223468999999999999999999999999
Q ss_pred CCceEEEEeccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEe
Q 044996 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLA 516 (678)
Q Consensus 437 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~ 516 (678)
.+..++||||+++|+|.++++.... ....++|..+..|+.|++.||+|||+.+ ..+|+||||||+|||+++++.+||+
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 99 PTERLLVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLHDHC-DPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp SSCCEEEEECCTTCBHHHHHHCCST-TCCCCCHHHHHHHHHHHHHHHHHHHHSS-SSCEECCCCSGGGEEECTTCCEEEC
T ss_pred CCceEEEEEeccCCCHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-CCCeEeCCCchhhEEECCCCCEEec
Confidence 9999999999999999999987543 2335999999999999999999999764 2379999999999999999999999
Q ss_pred ecCCccccCcc-----ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 044996 517 DYGLIPVMNQE-----SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVL 591 (678)
Q Consensus 517 DfGla~~~~~~-----~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~ 591 (678)
|||+++..... ....++..|+|||++.+..++.++|||||||++|||+||+.||+...........+.+|+....
T Consensus 177 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (326)
T 3uim_A 177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256 (326)
T ss_dssp CCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTT
T ss_pred cCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHh
Confidence 99999865432 1223688999999998888999999999999999999999999754433444567778877666
Q ss_pred hcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHh
Q 044996 592 ANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEV 646 (678)
Q Consensus 592 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i 646 (678)
...... .+.+..+... ....+...+.+++.+||+.||.+|||+.||++.|++.
T Consensus 257 ~~~~~~-~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 257 KEKKLE-ALVDVDLQGN-YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp SSCCST-TSSCTTCTTS-CCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred hchhhh-hhcChhhccc-cCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 554333 5556555433 3567788999999999999999999999999999863
No 21
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.2e-42 Score=362.54 Aligned_cols=250 Identities=23% Similarity=0.421 Sum_probs=205.7
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCCH
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSL 452 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL 452 (678)
.++||+|+||+||+|... ++..||+|++........+.|.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 94 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL 94 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcH
Confidence 567999999999999874 6889999998877777788999999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc----
Q 044996 453 AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES---- 528 (678)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~---- 528 (678)
.+++..... .++|.+++.|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 95 ~~~l~~~~~----~~~~~~~~~i~~qi~~al~~lH~~----~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (310)
T 3s95_A 95 RGIIKSMDS----QYPWSQRVSFAKDIASGMAYLHSM----NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166 (310)
T ss_dssp HHHHHHCCT----TSCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred HHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHhC----CccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence 999986432 599999999999999999999976 79999999999999999999999999997654322
Q ss_pred --------------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCC-CCChHHHHHHHHhc
Q 044996 529 --------------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKA-DGDLASWVNSVLAN 593 (678)
Q Consensus 529 --------------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~-~~~l~~~~~~~~~~ 593 (678)
...++..|+|||++.+..++.++|||||||++|||++|..|+......... ......+
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~------- 239 (310)
T 3s95_A 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGF------- 239 (310)
T ss_dssp -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHH-------
T ss_pred ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcc-------
Confidence 224678899999999999999999999999999999999998632211110 0011111
Q ss_pred CCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccC
Q 044996 594 GDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERD 650 (678)
Q Consensus 594 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~ 650 (678)
.+... .......+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 240 -------~~~~~-----~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 240 -------LDRYC-----PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp -------HHHTC-----CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -------ccccC-----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 11110 1112234778888999999999999999999999987653
No 22
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=8.2e-43 Score=389.23 Aligned_cols=242 Identities=19% Similarity=0.235 Sum_probs=191.1
Q ss_pred hccccCccCceeEEEEEe-cCCceEEEEEecccC---hhhHHHHH---HHHHHHhccCCCCccceeEEEEeCCceEEEEe
Q 044996 373 SAEILGSGCFGSSYKASL-STGAMMVVKRFKQMN---NVGREEFQ---EHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHE 445 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~---~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 445 (678)
+.++||+|+||+||+|+. .+|+.||||+++... ......+. .++.+++.++|||||+++++|.+.+..|||||
T Consensus 193 i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmE 272 (689)
T 3v5w_A 193 VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILD 272 (689)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEEC
T ss_pred EEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEe
Confidence 357899999999999986 468999999996421 12222333 34667778899999999999999999999999
Q ss_pred ccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccC
Q 044996 446 FVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMN 525 (678)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 525 (678)
||++|+|.++|.... .+++..+..|+.||+.||+|||+. +||||||||+|||||.++.+||+|||+|+.+.
T Consensus 273 y~~GGdL~~~l~~~~-----~l~E~~a~~y~~qIl~aL~yLH~~----gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 273 LMNGGDLHYHLSQHG-----VFSEADMRFYAAEIILGLEHMHNR----FVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp CCCSCBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHTT----TEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred cCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 999999999998653 589999999999999999999965 89999999999999999999999999998775
Q ss_pred cc--ccccccceeeCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccc
Q 044996 526 QE--SAQELMIAYKSPEFLQL-GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFD 602 (678)
Q Consensus 526 ~~--~~~~~~~~y~aPE~~~~-~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d 602 (678)
.. ....||+.|||||++.. ..|+.++||||+||+||||++|+.||.... ..+.....+.........
T Consensus 344 ~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~-----~~~~~~i~~~i~~~~~~~----- 413 (689)
T 3v5w_A 344 KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK-----TKDKHEIDRMTLTMAVEL----- 413 (689)
T ss_dssp SCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGG-----CCCHHHHHHHHHHCCCCC-----
T ss_pred CCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHhhcCCCCCC-----
Confidence 44 33468999999999964 579999999999999999999999996321 112222222222221111
Q ss_pred hhhhcccCCHHHHHHHHHHHhhcCccccccCCC-----HHHHHH
Q 044996 603 KEMADERNSEGEMVKLLKIGLACCEEEVEKRLD-----LKEAVE 641 (678)
Q Consensus 603 ~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs-----~~ev~~ 641 (678)
+......+.+++.+||+.||.+|++ +.||.+
T Consensus 414 --------p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 414 --------PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp --------CTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred --------CccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 1111234667777999999999998 677764
No 23
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.2e-42 Score=371.76 Aligned_cols=255 Identities=22% Similarity=0.360 Sum_probs=204.6
Q ss_pred ccccCccCceeEEEEEec--------CCceEEEEEeccc-ChhhHHHHHHHHHHHhcc-CCCCccceeEEEEeCCceEEE
Q 044996 374 AEILGSGCFGSSYKASLS--------TGAMMVVKRFKQM-NNVGREEFQEHMRRLGRL-RHPNLLPLVAYYYRKEEKLLV 443 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv 443 (678)
.+.||+|+||.||+|+.. ++..||||+++.. .....+++.+|+++++++ +||||++++++|...+..|+|
T Consensus 86 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv 165 (370)
T 2psq_A 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 165 (370)
T ss_dssp EEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEE
Confidence 567999999999999752 3457999999754 334567899999999999 899999999999999999999
Q ss_pred EeccCCCCHHHHhhccCCC-----------CCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCc
Q 044996 444 HEFVPKRSLAVNLHGHQAL-----------GQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLE 512 (678)
Q Consensus 444 ~Ey~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~ 512 (678)
|||+++|+|.+++...... ....+++.+++.++.||+.||+|||+. +|+||||||+|||++.++.
T Consensus 166 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivHrDlkp~NIll~~~~~ 241 (370)
T 2psq_A 166 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ----KCIHRDLAARNVLVTENNV 241 (370)
T ss_dssp EECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEECTTCC
T ss_pred EEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC----CeeccccchhhEEECCCCC
Confidence 9999999999999865321 123589999999999999999999976 8999999999999999999
Q ss_pred eEEeecCCccccCccc------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHH
Q 044996 513 PVLADYGLIPVMNQES------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLAS 585 (678)
Q Consensus 513 ~kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~ 585 (678)
+||+|||+++...... ...++..|+|||++.+..++.++|||||||++|||+| |+.||... ...+
T Consensus 242 ~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~--------~~~~ 313 (370)
T 2psq_A 242 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--------PVEE 313 (370)
T ss_dssp EEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--------CGGG
T ss_pred EEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC--------CHHH
Confidence 9999999998654321 2234578999999998999999999999999999999 99998621 2222
Q ss_pred HHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCC
Q 044996 586 WVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGD 652 (678)
Q Consensus 586 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~ 652 (678)
..... ..+... . ........+.+++.+||+.||.+|||+.|+++.|+++.....+
T Consensus 314 ~~~~~-~~~~~~-~----------~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~~ 368 (370)
T 2psq_A 314 LFKLL-KEGHRM-D----------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 368 (370)
T ss_dssp HHHHH-HTTCCC-C----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred HHHHH-hcCCCC-C----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhcc
Confidence 22222 221111 0 0112234577888899999999999999999999998765444
No 24
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.2e-41 Score=354.46 Aligned_cols=274 Identities=27% Similarity=0.460 Sum_probs=219.1
Q ss_pred ccccchHHHHHHh-----------ccccCccCceeEEEEEecCCceEEEEEeccc----ChhhHHHHHHHHHHHhccCCC
Q 044996 361 VERFDLHDLLRAS-----------AEILGSGCFGSSYKASLSTGAMMVVKRFKQM----NNVGREEFQEHMRRLGRLRHP 425 (678)
Q Consensus 361 ~~~~~~~~~~~~~-----------~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l~H~ 425 (678)
...|++.++..++ .+.||+|+||.||+|.. ++..||||++... .....+.+.+|++++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 3456666666654 26799999999999987 6788999998753 233467899999999999999
Q ss_pred CccceeEEEEeCCceEEEEeccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCE
Q 044996 426 NLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNV 505 (678)
Q Consensus 426 niv~l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NI 505 (678)
||+++++++.+.+..++||||+++|+|.+++..... ...++|..+..++.||+.||+|||+. +|+||||||+||
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~----~i~H~dlkp~Ni 164 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG--TPPLSWHMRCKIAQGAANGINFLHEN----HHIHRDIKSANI 164 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG--CCCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGE
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhcC----CeecCCCCHHHE
Confidence 999999999999999999999999999999975432 23699999999999999999999976 899999999999
Q ss_pred EecCCCceEEeecCCccccCcc------ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCC
Q 044996 506 LLNESLEPVLADYGLIPVMNQE------SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKA 579 (678)
Q Consensus 506 Ll~~~~~~kl~DfGla~~~~~~------~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~ 579 (678)
|+++++.+||+|||+++..... ....++..|+|||.+.+ .++.++||||||+++|||++|+.||.....
T Consensus 165 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---- 239 (307)
T 2nru_A 165 LLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHRE---- 239 (307)
T ss_dssp EECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBS----
T ss_pred EEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcc----
Confidence 9999999999999998765432 12346788999998864 589999999999999999999999974321
Q ss_pred CCChHHHHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhc
Q 044996 580 DGDLASWVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKE 648 (678)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 648 (678)
...+..+............+.+++.+.. ........+.+++.+||+.||.+|||+.||++.|+++..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 240 PQLLLDIKEEIEDEEKTIEDYIDKKMND--ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp SSBTTHHHHHHHTTSCCHHHHSCSSCSC--CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred hHHHHHHHHHhhhhhhhhhhhccccccc--cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 2234444444443333333344444322 244567788999999999999999999999999999864
No 25
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=3.3e-42 Score=361.92 Aligned_cols=251 Identities=22% Similarity=0.378 Sum_probs=203.1
Q ss_pred ccccCccCceeEEEEEec----CCceEEEEEeccc-ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccC
Q 044996 374 AEILGSGCFGSSYKASLS----TGAMMVVKRFKQM-NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVP 448 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~ 448 (678)
.+.||+|+||.||+|... .+..||||+++.. .....+.|.+|++++++++||||+++++++.+.+..++||||++
T Consensus 54 ~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 133 (325)
T 3kul_A 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYME 133 (325)
T ss_dssp EEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCT
T ss_pred eeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCC
Confidence 567999999999999874 3456999999864 34556789999999999999999999999999999999999999
Q ss_pred CCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc
Q 044996 449 KRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES 528 (678)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 528 (678)
+|+|.++++.... .+++.+++.|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 134 ~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~----~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 134 NGSLDTFLRTHDG----QFTIMQLVGMLRGVGAGMRYLSDL----GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp TCBHHHHHHTTTT----CSCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred CCcHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHC----CeeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 9999999975432 599999999999999999999976 89999999999999999999999999998765432
Q ss_pred c-------ccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCccccc
Q 044996 529 A-------QELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRTEV 600 (678)
Q Consensus 529 ~-------~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 600 (678)
. ..++..|+|||++.+..++.++|||||||++|||++ |+.||.. ....+........ ... .
T Consensus 206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~--------~~~~~~~~~~~~~-~~~-~- 274 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWN--------MTNRDVISSVEEG-YRL-P- 274 (325)
T ss_dssp -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT--------SCHHHHHHHHHTT-CCC-C-
T ss_pred cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCccc--------CCHHHHHHHHHcC-CCC-C-
Confidence 1 123567999999998899999999999999999999 9999962 2222222222221 111 0
Q ss_pred cchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCC
Q 044996 601 FDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGD 652 (678)
Q Consensus 601 ~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~ 652 (678)
........+.+++.+||+.||.+|||+.||++.|+.+....+.
T Consensus 275 ---------~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~ 317 (325)
T 3kul_A 275 ---------APMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES 317 (325)
T ss_dssp ---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred ---------CCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence 0112234577888899999999999999999999999876544
No 26
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=6e-42 Score=357.20 Aligned_cols=252 Identities=25% Similarity=0.341 Sum_probs=197.1
Q ss_pred hccccCccCceeEEEEEecCCceEEEEEecccC--hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCC
Q 044996 373 SAEILGSGCFGSSYKASLSTGAMMVVKRFKQMN--NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKR 450 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~g 450 (678)
..+.||+|+||+||+|+. ++..||||++.... ....++|.+|++++++++||||+++++++...+..++||||+++|
T Consensus 41 i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 119 (309)
T 3p86_A 41 IKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119 (309)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTC
T ss_pred eeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCC
Confidence 356799999999999987 68889999987543 344568999999999999999999999999999999999999999
Q ss_pred CHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCC--CcccCCCCCCEEecCCCceEEeecCCccccCcc-
Q 044996 451 SLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLI--APHGHIKSSNVLLNESLEPVLADYGLIPVMNQE- 527 (678)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~--ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~- 527 (678)
+|.+++..... ...+++..++.++.||+.||+|||+. + |+||||||+|||+++++.+||+|||+++.....
T Consensus 120 ~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~----~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~ 193 (309)
T 3p86_A 120 SLYRLLHKSGA--REQLDERRRLSMAYDVAKGMNYLHNR----NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF 193 (309)
T ss_dssp BHHHHHHSTTH--HHHSCHHHHHHHHHHHHHHHHHHHTS----SSCCCCTTCCGGGEEECTTCCEEECCCC---------
T ss_pred cHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcC----CCCEECCCCChhhEEEeCCCcEEECCCCCCccccccc
Confidence 99999976431 11389999999999999999999966 6 999999999999999999999999999765433
Q ss_pred ---ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchh
Q 044996 528 ---SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKE 604 (678)
Q Consensus 528 ---~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 604 (678)
....++..|+|||++.+..++.++|||||||++|||+||+.||.. ....+............ ..
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~--------~~~~~~~~~~~~~~~~~-~~---- 260 (309)
T 3p86_A 194 LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGN--------LNPAQVVAAVGFKCKRL-EI---- 260 (309)
T ss_dssp --------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTT--------SCHHHHHHHHHHSCCCC-CC----
T ss_pred cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHHHhcCCCC-CC----
Confidence 233467889999999999999999999999999999999999972 22223322222121111 10
Q ss_pred hhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccC
Q 044996 605 MADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERD 650 (678)
Q Consensus 605 l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~ 650 (678)
.......+.+++.+||+.||.+|||+.|+++.|+.+....
T Consensus 261 ------~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 261 ------PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp ------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred ------CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 1112234778888999999999999999999999987653
No 27
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=7.2e-42 Score=349.16 Aligned_cols=247 Identities=22% Similarity=0.380 Sum_probs=204.6
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCCHH
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLA 453 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL~ 453 (678)
.+.||+|+||.||+|...++..||+|++.... ...+++.+|++++++++||||+++++++.+.+..++||||+++|+|.
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (269)
T 4hcu_A 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 93 (269)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHH
Confidence 46799999999999999888899999997543 34577999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc-----
Q 044996 454 VNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES----- 528 (678)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~----- 528 (678)
+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 94 ~~l~~~~~----~~~~~~~~~i~~~i~~~l~~lH~~----~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 165 (269)
T 4hcu_A 94 DYLRTQRG----LFAAETLLGMCLDVCEGMAYLEEA----CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 165 (269)
T ss_dssp HHHHTTTT----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred HHHHhcCc----ccCHHHHHHHHHHHHHHHHHHHhC----CeecCCcchheEEEcCCCCEEecccccccccccccccccc
Confidence 99976432 589999999999999999999976 79999999999999999999999999998664432
Q ss_pred cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhc
Q 044996 529 AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMAD 607 (678)
Q Consensus 529 ~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~ 607 (678)
...++..|+|||++.+..++.++||||||+++|||++ |+.||.. ....+........... ..+.
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~--------~~~~~~~~~~~~~~~~----~~~~--- 230 (269)
T 4hcu_A 166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN--------RSNSEVVEDISTGFRL----YKPR--- 230 (269)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT--------CCHHHHHHHHHTTCCC----CCCT---
T ss_pred CcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCC--------CCHHHHHHHHhcCccC----CCCC---
Confidence 2234567999999998899999999999999999999 9999862 2223333333222111 1111
Q ss_pred ccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhcc
Q 044996 608 ERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKER 649 (678)
Q Consensus 608 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 649 (678)
.....+.+++.+||+.||.+|||+.|+++.|+++.+.
T Consensus 231 -----~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 231 -----LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp -----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -----cCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 1123477788899999999999999999999998764
No 28
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.4e-42 Score=372.29 Aligned_cols=249 Identities=22% Similarity=0.383 Sum_probs=203.7
Q ss_pred hccccCccCceeEEEEEec-CCceEEEEEecccC-hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCC
Q 044996 373 SAEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN-NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKR 450 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~g 450 (678)
..+.||+|+||.||+|.+. +++.||||.++... ....++|.+|+++|++++|||||++++++...+..++||||+++|
T Consensus 118 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 197 (377)
T 3cbl_A 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197 (377)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred EeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCC
Confidence 3567999999999999885 78899999987542 334567899999999999999999999999999999999999999
Q ss_pred CHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc--
Q 044996 451 SLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES-- 528 (678)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~-- 528 (678)
+|.++++.... .+++.+++.++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 198 ~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~LH~~----~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 198 DFLTFLRTEGA----RLRVKTLLQMVGDAAAGMEYLESK----CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp BHHHHHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred CHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHC----CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 99999986532 489999999999999999999976 79999999999999999999999999997654321
Q ss_pred ----cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCccccccch
Q 044996 529 ----AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDK 603 (678)
Q Consensus 529 ----~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~ 603 (678)
...++..|+|||++.++.++.++|||||||++|||+| |+.||... . ...+...+..+... .
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~--------~-~~~~~~~~~~~~~~-~---- 335 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL--------S-NQQTREFVEKGGRL-P---- 335 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTS--------C-HHHHHHHHHTTCCC-C----
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------C-HHHHHHHHHcCCCC-C----
Confidence 1224567999999998899999999999999999999 99998621 1 12222233222111 0
Q ss_pred hhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhcc
Q 044996 604 EMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKER 649 (678)
Q Consensus 604 ~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 649 (678)
.+......+.+++.+||+.||++|||+.+|++.|+++...
T Consensus 336 ------~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 336 ------CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp ------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 0111234577888899999999999999999999998753
No 29
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=3.5e-42 Score=361.21 Aligned_cols=262 Identities=24% Similarity=0.325 Sum_probs=201.3
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCc----eEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEE----KLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~----~~lv~Ey~~~ 449 (678)
.++||+|+||+||+|+.. ++.||||++... ......+.+|+.++++++|||||++++++..... .++||||+++
T Consensus 29 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~ 106 (322)
T 3soc_A 29 LEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ-DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEK 106 (322)
T ss_dssp EEEEECSTTCEEEEEEET-TEEEEEEEECGG-GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred hheecccCceEEEEEEEC-CCEEEEEEeecC-chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCC
Confidence 467999999999999875 789999998754 3344566779999999999999999999987543 6999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhC------CCCCCcccCCCCCCEEecCCCceEEeecCCccc
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYREL------PSLIAPHGHIKSSNVLLNESLEPVLADYGLIPV 523 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~ 523 (678)
|+|.++++.. .++|..+..|+.|++.||+|||+.+ +..+|+||||||+|||++.++.+||+|||+++.
T Consensus 107 g~L~~~l~~~------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~ 180 (322)
T 3soc_A 107 GSLSDFLKAN------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK 180 (322)
T ss_dssp CBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred CCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccc
Confidence 9999999764 4899999999999999999999531 122799999999999999999999999999976
Q ss_pred cCccc------cccccceeeCcccccc-----CCCCCcchHHHHHHHHHHHHhCCCCccccccCCC--------CCCChH
Q 044996 524 MNQES------AQELMIAYKSPEFLQL-----GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKK--------ADGDLA 584 (678)
Q Consensus 524 ~~~~~------~~~~~~~y~aPE~~~~-----~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~--------~~~~l~ 584 (678)
+.... ...++..|+|||++.+ ..++.++|||||||++|||+||+.||........ ......
T Consensus 181 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 260 (322)
T 3soc_A 181 FEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLE 260 (322)
T ss_dssp ECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHH
T ss_pred cccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchh
Confidence 54322 2346889999999976 3456789999999999999999999873221110 001222
Q ss_pred HHHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhcc
Q 044996 585 SWVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKER 649 (678)
Q Consensus 585 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 649 (678)
.+......... . +.+............+.+++.+||+.||++|||+.||++.|+++.+.
T Consensus 261 ~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 261 DMQEVVVHKKK-R-----PVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HHHHHHTTSCC-C-----CCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhhhhhhcccC-C-----CCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 22222222111 1 11111111224566788999999999999999999999999998764
No 30
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=6.9e-42 Score=354.73 Aligned_cols=240 Identities=23% Similarity=0.324 Sum_probs=198.8
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCCH
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSL 452 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL 452 (678)
.+.||+|+||+||+|.. .+++.||||++........+.+.+|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 25 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (297)
T 3fxz_A 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104 (297)
T ss_dssp CEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred eeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCH
Confidence 46799999999999985 57889999999866556677899999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc----c
Q 044996 453 AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE----S 528 (678)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~----~ 528 (678)
.+++... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..... .
T Consensus 105 ~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 174 (297)
T 3fxz_A 105 TDVVTET------CMDEGQIAAVCRECLQALEFLHSN----QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (297)
T ss_dssp HHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred HHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhC----CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccC
Confidence 9999764 489999999999999999999976 8999999999999999999999999998766533 2
Q ss_pred cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhcc
Q 044996 529 AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMADE 608 (678)
Q Consensus 529 ~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~ 608 (678)
...++..|+|||++.+..++.++|||||||++|||+||+.||.. .+............... ...
T Consensus 175 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~--------~~~~~~~~~~~~~~~~~--~~~------ 238 (297)
T 3fxz_A 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN--------ENPLRALYLIATNGTPE--LQN------ 238 (297)
T ss_dssp CCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTT--------SCHHHHHHHHHHHCSCC--CSC------
T ss_pred CccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHHHhCCCCC--CCC------
Confidence 23467889999999999999999999999999999999999962 22222222222222111 000
Q ss_pred cCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 609 RNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 609 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.......+.+++.+||+.||++|||+.|+++
T Consensus 239 --~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 239 --PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp --GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --ccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 1112234677888999999999999999986
No 31
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=3.6e-42 Score=368.39 Aligned_cols=249 Identities=22% Similarity=0.411 Sum_probs=194.4
Q ss_pred ccccCccCceeEEEEEec----CCceEEEEEeccc-ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccC
Q 044996 374 AEILGSGCFGSSYKASLS----TGAMMVVKRFKQM-NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVP 448 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~ 448 (678)
.+.||+|+||.||+|+.. ++..||||+++.. .....++|.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 50 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 129 (373)
T 2qol_A 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME 129 (373)
T ss_dssp CEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred eeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCC
Confidence 567999999999999865 5678999999754 34556789999999999999999999999999999999999999
Q ss_pred CCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc
Q 044996 449 KRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES 528 (678)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 528 (678)
+|+|.++++.... .+++.+++.|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 130 ~~sL~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 130 NGSLDSFLRKHDA----QFTVIQLVGMLRGIASGMKYLSDM----GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp TCBHHHHHHTTTT----CSCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred CCcHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHHC----CeeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence 9999999976532 589999999999999999999976 79999999999999999999999999998765432
Q ss_pred c-------ccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCccccc
Q 044996 529 A-------QELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRTEV 600 (678)
Q Consensus 529 ~-------~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 600 (678)
. ..++..|+|||++.+..++.++|||||||++|||++ |+.||.. ....+.... +..+...
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~--------~~~~~~~~~-i~~~~~~--- 269 (373)
T 2qol_A 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE--------MSNQDVIKA-VDEGYRL--- 269 (373)
T ss_dssp ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTT--------CCHHHHHHH-HHTTEEC---
T ss_pred ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCC--------CCHHHHHHH-HHcCCCC---
Confidence 1 123467999999998999999999999999999998 9999862 122222222 2111100
Q ss_pred cchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccC
Q 044996 601 FDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERD 650 (678)
Q Consensus 601 ~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~ 650 (678)
.........+.+++.+||+.||.+||+|.||++.|+++....
T Consensus 270 --------~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 270 --------PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp --------CCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred --------CCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 011123445788889999999999999999999999986543
No 32
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=4.9e-42 Score=355.34 Aligned_cols=258 Identities=22% Similarity=0.385 Sum_probs=201.2
Q ss_pred ccccCccCceeEEEEEe-----cCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeC--CceEEEEec
Q 044996 374 AEILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRK--EEKLLVHEF 446 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~lv~Ey 446 (678)
.+.||+|+||+||+|++ .+++.||||++........+.|.+|++++++++||||+++++++... ...++||||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 94 (295)
T 3ugc_A 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 94 (295)
T ss_dssp EEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEEC
T ss_pred hheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEe
Confidence 46799999999999984 36789999999877777778899999999999999999999999653 458999999
Q ss_pred cCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCc
Q 044996 447 VPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQ 526 (678)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 526 (678)
+++|+|.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 95 ~~~~~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (295)
T 3ugc_A 95 LPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGTK----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166 (295)
T ss_dssp CTTCBHHHHHHHCGG----GCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEEEETTEEEECCCCSCC----
T ss_pred CCCCCHHHHHHhccc----ccCHHHHHHHHHHHHHHHHHHhcC----CcccCCCCHhhEEEcCCCeEEEccCcccccccC
Confidence 999999999986542 489999999999999999999976 899999999999999999999999999987643
Q ss_pred cc-------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccC-------CCCCCChHHHHHHHHh
Q 044996 527 ES-------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQG-------KKADGDLASWVNSVLA 592 (678)
Q Consensus 527 ~~-------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~-------~~~~~~l~~~~~~~~~ 592 (678)
.. ...++..|+|||++.+..++.++|||||||++|||+||..|+...... ..........+...+.
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (295)
T 3ugc_A 167 DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 246 (295)
T ss_dssp ---------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred CcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHh
Confidence 32 223456799999999899999999999999999999999997621100 0000000111111111
Q ss_pred cCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccC
Q 044996 593 NGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERD 650 (678)
Q Consensus 593 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~ 650 (678)
.+... .........+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 247 ~~~~~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 247 NNGRL-----------PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp TTCCC-----------CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred ccCcC-----------CCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 11110 011123356788888999999999999999999999998754
No 33
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=5.9e-42 Score=376.60 Aligned_cols=250 Identities=24% Similarity=0.406 Sum_probs=204.9
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCCHH
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLA 453 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL~ 453 (678)
.+.||+|+||.||+|.+.++..||||+++... ...+.|.+|+++|++++|||||++++++. .+..++|||||++|+|.
T Consensus 193 ~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~ 270 (454)
T 1qcf_A 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLL 270 (454)
T ss_dssp EEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHH
T ss_pred EEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHH
Confidence 46799999999999999888899999998643 45788999999999999999999999986 66789999999999999
Q ss_pred HHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc-----
Q 044996 454 VNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES----- 528 (678)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~----- 528 (678)
++++.... ..+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 271 ~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~----~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~ 343 (454)
T 1qcf_A 271 DFLKSDEG---SKQPLPKLIDFSAQIAEGMAFIEQR----NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE 343 (454)
T ss_dssp HHHHSHHH---HTCCHHHHHHHHHHHHHHHHHHHHT----TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTC
T ss_pred HHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHhC----CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccC
Confidence 99975432 1488999999999999999999976 79999999999999999999999999998765431
Q ss_pred cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhc
Q 044996 529 AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMAD 607 (678)
Q Consensus 529 ~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~ 607 (678)
...++..|+|||++....++.++|||||||+||||+| |+.||.. ....+...... .+... -
T Consensus 344 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~--------~~~~~~~~~i~-~~~~~---~------ 405 (454)
T 1qcf_A 344 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG--------MSNPEVIRALE-RGYRM---P------ 405 (454)
T ss_dssp SSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT--------CCHHHHHHHHH-HTCCC---C------
T ss_pred CCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCC--------CCHHHHHHHHH-cCCCC---C------
Confidence 2234578999999998899999999999999999999 9999962 22222222222 21111 0
Q ss_pred ccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCC
Q 044996 608 ERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGD 652 (678)
Q Consensus 608 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~ 652 (678)
.+......+.+++.+||+.||++||||.+|++.|+++....+.
T Consensus 406 --~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~~ 448 (454)
T 1qcf_A 406 --RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATES 448 (454)
T ss_dssp --CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSCC
T ss_pred --CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcccc
Confidence 0112334578888999999999999999999999988765443
No 34
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.3e-41 Score=354.80 Aligned_cols=239 Identities=18% Similarity=0.250 Sum_probs=198.3
Q ss_pred cccCccCceeEEEEEec-CCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCCHH
Q 044996 375 EILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLA 453 (678)
Q Consensus 375 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL~ 453 (678)
+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++||||+++++++...+..++||||+++|+|.
T Consensus 51 ~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 130 (321)
T 2c30_A 51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALT 130 (321)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHH
T ss_pred EEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHH
Confidence 57999999999999875 78999999998766666788999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc----cc
Q 044996 454 VNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE----SA 529 (678)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~----~~ 529 (678)
+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..... ..
T Consensus 131 ~~l~~~------~l~~~~~~~i~~qi~~~L~~LH~~----~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 200 (321)
T 2c30_A 131 DIVSQV------RLNEEQIATVCEAVLQALAYLHAQ----GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS 200 (321)
T ss_dssp HHHTTC------CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCC
T ss_pred HHHHhc------CCCHHHHHHHHHHHHHHHHHHHHC----CeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcccccc
Confidence 998643 589999999999999999999976 8999999999999999999999999998766433 23
Q ss_pred ccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhccc
Q 044996 530 QELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMADER 609 (678)
Q Consensus 530 ~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~ 609 (678)
..++..|+|||++.+..++.++|||||||++|||++|+.||.. ....+........... .+...
T Consensus 201 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~--------~~~~~~~~~~~~~~~~-------~~~~~- 264 (321)
T 2c30_A 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFS--------DSPVQAMKRLRDSPPP-------KLKNS- 264 (321)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT--------SCHHHHHHHHHHSSCC-------CCTTG-
T ss_pred ccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHHhcCCCC-------CcCcc-
Confidence 3568899999999988999999999999999999999999962 2222333322222111 11000
Q ss_pred CCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 610 NSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 610 ~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
......+.+++.+||+.||++|||+.|+++
T Consensus 265 --~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 265 --HKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp --GGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 011234677888999999999999999987
No 35
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.8e-41 Score=354.91 Aligned_cols=238 Identities=20% Similarity=0.278 Sum_probs=198.5
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEeccc--ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCC
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQM--NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKR 450 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~g 450 (678)
.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 20 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~ 99 (328)
T 3fe3_A 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG 99 (328)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCC
Confidence 46799999999999986 67899999998753 3445677899999999999999999999999999999999999999
Q ss_pred CHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc---
Q 044996 451 SLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE--- 527 (678)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~--- 527 (678)
+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 100 ~L~~~l~~~~-----~l~~~~~~~~~~qi~~al~~lH~~----~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 170 (328)
T 3fe3_A 100 EVFDYLVAHG-----RMKEKEARSKFRQIVSAVQYCHQK----RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 170 (328)
T ss_dssp BHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGG
T ss_pred cHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcc
Confidence 9999997653 489999999999999999999976 8999999999999999999999999999765533
Q ss_pred ccccccceeeCccccccCCCC-CcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhh
Q 044996 528 SAQELMIAYKSPEFLQLGRIT-KKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMA 606 (678)
Q Consensus 528 ~~~~~~~~y~aPE~~~~~~~t-~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~ 606 (678)
....++..|+|||++.+..++ .++|||||||++|||++|+.||. ..+..+............
T Consensus 171 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~--------~~~~~~~~~~i~~~~~~~--------- 233 (328)
T 3fe3_A 171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD--------GQNLKELRERVLRGKYRI--------- 233 (328)
T ss_dssp GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSC--------CSSHHHHHHHHHHCCCCC---------
T ss_pred ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCC--------CCCHHHHHHHHHhCCCCC---------
Confidence 233578899999999887775 79999999999999999999997 234444444444332111
Q ss_pred cccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 607 DERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 607 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
+......+.+++.+||+.||.+|||+.|+++
T Consensus 234 ----p~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 234 ----PFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp ----CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred ----CCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0011234667788999999999999999986
No 36
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.3e-41 Score=347.02 Aligned_cols=248 Identities=22% Similarity=0.387 Sum_probs=203.2
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCCHH
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLA 453 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL~ 453 (678)
.+.||+|+||.||+|+..++..||+|+++... ...+++.+|++++.+++||||+++++++.+.+..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (268)
T 3sxs_A 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLL 91 (268)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHH
Confidence 46799999999999999888889999987543 34577999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc-----
Q 044996 454 VNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES----- 528 (678)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~----- 528 (678)
+++..... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 92 ~~l~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~----~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 163 (268)
T 3sxs_A 92 NYLRSHGK----GLEPSQLLEMCYDVCEGMAFLESH----QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV 163 (268)
T ss_dssp HHHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHT----TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECC
T ss_pred HHHHHcCC----CCCHHHHHHHHHHHHHHHHHHHHC----CeecCCcCcceEEECCCCCEEEccCccceecchhhhhccc
Confidence 99976532 489999999999999999999976 89999999999999999999999999997654432
Q ss_pred cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhc
Q 044996 529 AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMAD 607 (678)
Q Consensus 529 ~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~ 607 (678)
...++..|+|||++.+..++.++||||||+++|||+| |+.||.. ................ ..+.
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~--------~~~~~~~~~~~~~~~~----~~~~--- 228 (268)
T 3sxs_A 164 GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDL--------YTNSEVVLKVSQGHRL----YRPH--- 228 (268)
T ss_dssp SCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTT--------SCHHHHHHHHHTTCCC----CCCT---
T ss_pred CCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccc--------cChHHHHHHHHcCCCC----CCCC---
Confidence 1224567999999988889999999999999999999 9999962 2222222222222111 1111
Q ss_pred ccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccC
Q 044996 608 ERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERD 650 (678)
Q Consensus 608 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~ 650 (678)
.....+.+++.+||+.||.+|||+.|+++.|+++.+..
T Consensus 229 -----~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 229 -----LASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp -----TSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred -----cChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 11234778888999999999999999999999987653
No 37
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=3.1e-41 Score=347.00 Aligned_cols=247 Identities=21% Similarity=0.341 Sum_probs=201.3
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCCHH
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLA 453 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL~ 453 (678)
.+.||+|+||.||+|...++..||+|+++... ...+++.+|++++.+++||||+++++++.+.+..++||||+++|+|.
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (283)
T 3gen_A 29 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 107 (283)
T ss_dssp EEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHH
T ss_pred HhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHH
Confidence 46799999999999999888899999997543 34577999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc-----
Q 044996 454 VNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES----- 528 (678)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~----- 528 (678)
+++..... .+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 108 ~~l~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~----~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 179 (283)
T 3gen_A 108 NYLREMRH----RFQTQQLLEMCKDVCEAMEYLESK----QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 179 (283)
T ss_dssp HHHHCGGG----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTT
T ss_pred HHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHC----CccCCCCccceEEEcCCCCEEEcccccccccccccccccc
Confidence 99976432 589999999999999999999976 89999999999999999999999999998664432
Q ss_pred cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhc
Q 044996 529 AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMAD 607 (678)
Q Consensus 529 ~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~ 607 (678)
...++..|+|||++.+..++.++||||||+++|||+| |+.||.. ................. .+
T Consensus 180 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~--------~~~~~~~~~~~~~~~~~----~~---- 243 (283)
T 3gen_A 180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER--------FTNSETAEHIAQGLRLY----RP---- 243 (283)
T ss_dssp STTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTT--------SCHHHHHHHHHTTCCCC----CC----
T ss_pred CCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccc--------cChhHHHHHHhcccCCC----CC----
Confidence 2234567999999998899999999999999999999 9999972 22222222222211110 01
Q ss_pred ccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhcc
Q 044996 608 ERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKER 649 (678)
Q Consensus 608 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 649 (678)
......+.+++.+||+.||.+|||+.|+++.|+++.+.
T Consensus 244 ----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 244 ----HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp ----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 11123577888899999999999999999999998764
No 38
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.4e-41 Score=352.56 Aligned_cols=254 Identities=24% Similarity=0.347 Sum_probs=193.9
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhc--cCCCCccceeEEEEeC----CceEEEEecc
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGR--LRHPNLLPLVAYYYRK----EEKLLVHEFV 447 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~~----~~~~lv~Ey~ 447 (678)
.+.||+|+||+||+|+. +++.||||++... ..+.+..|.+++.. ++||||+++++++... ...++||||+
T Consensus 13 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~ 88 (301)
T 3q4u_A 13 LECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYH 88 (301)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred EEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhc
Confidence 46799999999999987 6889999998653 34556667666665 8999999999997653 4589999999
Q ss_pred CCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhC----CCCCCcccCCCCCCEEecCCCceEEeecCCccc
Q 044996 448 PKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYREL----PSLIAPHGHIKSSNVLLNESLEPVLADYGLIPV 523 (678)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~----~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~ 523 (678)
++|+|.++++.. .+++..+++|+.||+.||+|||... ...+|+||||||+|||++.++.+||+|||+++.
T Consensus 89 ~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 162 (301)
T 3q4u_A 89 EMGSLYDYLQLT------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM 162 (301)
T ss_dssp TTCBHHHHHTTC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred cCCCHHHHHhhc------ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeee
Confidence 999999999643 5899999999999999999999311 023899999999999999999999999999976
Q ss_pred cCccc--------cccccceeeCccccccC------CCCCcchHHHHHHHHHHHHhC----------CCCccccccCCCC
Q 044996 524 MNQES--------AQELMIAYKSPEFLQLG------RITKKTDVWSLGVLILEIMTG----------KFPANFLQQGKKA 579 (678)
Q Consensus 524 ~~~~~--------~~~~~~~y~aPE~~~~~------~~t~ksDvwS~Gvvl~el~tg----------~~P~~~~~~~~~~ 579 (678)
..... ...++..|+|||++.+. .++.++|||||||++|||+|| +.||......
T Consensus 163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~--- 239 (301)
T 3q4u_A 163 HSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN--- 239 (301)
T ss_dssp EETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS---
T ss_pred cccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC---
Confidence 54322 12578899999999876 445799999999999999999 7777532211
Q ss_pred CCChHHHHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHh
Q 044996 580 DGDLASWVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEV 646 (678)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i 646 (678)
....... .......... +.+............+.+++.+||+.||.+|||+.||++.|+++
T Consensus 240 ~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 240 DPSFEDM-RKVVCVDQQR-----PNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SCCHHHH-HHHHTTSCCC-----CCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred Ccchhhh-hHHHhccCCC-----CCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 1222222 2222221111 11111111234567789999999999999999999999999986
No 39
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.5e-41 Score=362.27 Aligned_cols=257 Identities=22% Similarity=0.316 Sum_probs=207.7
Q ss_pred hccccCccCceeEEEEEec--------CCceEEEEEeccc-ChhhHHHHHHHHHHHhcc-CCCCccceeEEEEeCCceEE
Q 044996 373 SAEILGSGCFGSSYKASLS--------TGAMMVVKRFKQM-NNVGREEFQEHMRRLGRL-RHPNLLPLVAYYYRKEEKLL 442 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 442 (678)
..+.||+|+||.||+|+.. .+..||||+++.. .....+++.+|+++++++ +|||||++++++...+..++
T Consensus 73 i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 152 (382)
T 3tt0_A 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV 152 (382)
T ss_dssp EEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEE
Confidence 3567999999999999752 2357999998754 344557899999999999 99999999999999999999
Q ss_pred EEeccCCCCHHHHhhccCCC-----------CCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCC
Q 044996 443 VHEFVPKRSLAVNLHGHQAL-----------GQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESL 511 (678)
Q Consensus 443 v~Ey~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~ 511 (678)
||||+++|+|.+++...... ....+++.+++.|+.||+.||+|||+. +|+||||||+|||+++++
T Consensus 153 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dlkp~NIll~~~~ 228 (382)
T 3tt0_A 153 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK----KCIHRDLAARNVLVTEDN 228 (382)
T ss_dssp EEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTTC
T ss_pred EEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC----CEecCCCCcceEEEcCCC
Confidence 99999999999999865421 123599999999999999999999976 899999999999999999
Q ss_pred ceEEeecCCccccCcc------ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChH
Q 044996 512 EPVLADYGLIPVMNQE------SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLA 584 (678)
Q Consensus 512 ~~kl~DfGla~~~~~~------~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~ 584 (678)
.+||+|||+++..... ....++..|+|||++.+..++.++|||||||++|||+| |+.||.. ....
T Consensus 229 ~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~--------~~~~ 300 (382)
T 3tt0_A 229 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG--------VPVE 300 (382)
T ss_dssp CEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTT--------CCHH
T ss_pred cEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC--------CCHH
Confidence 9999999999866432 22235678999999999999999999999999999999 9999862 2333
Q ss_pred HHHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCCC
Q 044996 585 SWVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGDE 653 (678)
Q Consensus 585 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~~ 653 (678)
+...... .+... .. .......+.+++.+||+.||++|||+.||++.|+++.......
T Consensus 301 ~~~~~~~-~~~~~-~~----------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~ 357 (382)
T 3tt0_A 301 ELFKLLK-EGHRM-DK----------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQ 357 (382)
T ss_dssp HHHHHHH-TTCCC-CC----------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSC
T ss_pred HHHHHHH-cCCCC-CC----------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcC
Confidence 3333332 22111 00 0112345778888999999999999999999999998766554
No 40
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.9e-41 Score=371.93 Aligned_cols=246 Identities=24% Similarity=0.394 Sum_probs=200.5
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCC-ceEEEEeccCCCCH
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKE-EKLLVHEFVPKRSL 452 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~-~~~lv~Ey~~~gsL 452 (678)
.+.||+|+||.||+|.+. ++.||||.++... ..+.|.+|+++|++++|||||++++++...+ ..++|||||++|+|
T Consensus 198 ~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L 274 (450)
T 1k9a_A 198 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 274 (450)
T ss_dssp EEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBH
T ss_pred EeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcH
Confidence 567999999999999875 7799999998643 4578999999999999999999999988765 78999999999999
Q ss_pred HHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc-cccc
Q 044996 453 AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE-SAQE 531 (678)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~-~~~~ 531 (678)
.++++.... ..+++..++.++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++..... ....
T Consensus 275 ~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~----~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 347 (450)
T 1k9a_A 275 VDYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLEGN----NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 347 (450)
T ss_dssp HHHHHHHCT---TTCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEECTTSCEEECCCTTCEECC------C
T ss_pred HHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhC----CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCC
Confidence 999986532 2479999999999999999999976 7999999999999999999999999999865432 2234
Q ss_pred ccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhcccC
Q 044996 532 LMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMADERN 610 (678)
Q Consensus 532 ~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~ 610 (678)
++..|+|||++.+..++.++|||||||++|||+| |+.||.... ...+ +.. +..+... . .
T Consensus 348 ~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~-----~~~~---~~~-i~~~~~~-~----------~ 407 (450)
T 1k9a_A 348 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----LKDV---VPR-VEKGYKM-D----------A 407 (450)
T ss_dssp CCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSC-----TTTH---HHH-HHTTCCC-C----------C
T ss_pred CCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC-----HHHH---HHH-HHcCCCC-C----------C
Confidence 5678999999999999999999999999999999 999997321 1122 221 2222111 0 1
Q ss_pred CHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhcc
Q 044996 611 SEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKER 649 (678)
Q Consensus 611 ~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 649 (678)
+......+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 408 p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 408 PDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 112334577888899999999999999999999998754
No 41
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=362.22 Aligned_cols=252 Identities=22% Similarity=0.338 Sum_probs=202.2
Q ss_pred ccccCccCceeEEEEEec------CCceEEEEEeccc-ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEec
Q 044996 374 AEILGSGCFGSSYKASLS------TGAMMVVKRFKQM-NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEF 446 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey 446 (678)
.+.||+|+||.||+|.+. ++..||||+++.. ......++.+|+.++++++|||||++++++......++||||
T Consensus 76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 155 (367)
T 3l9p_A 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLEL 155 (367)
T ss_dssp EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEe
Confidence 567999999999999853 4668999998753 345566799999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhccCCC--CCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCC---ceEEeecCCc
Q 044996 447 VPKRSLAVNLHGHQAL--GQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESL---EPVLADYGLI 521 (678)
Q Consensus 447 ~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~---~~kl~DfGla 521 (678)
+++|+|.+++...... ....+++.+++.|+.||+.||+|||+. +|+||||||+|||++.++ .+||+|||++
T Consensus 156 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a 231 (367)
T 3l9p_A 156 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN----HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231 (367)
T ss_dssp CTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred CCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC----CeeCCCCChhhEEEecCCCCceEEECCCccc
Confidence 9999999999865421 123589999999999999999999977 899999999999999544 5999999999
Q ss_pred cccCc------cccccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcC
Q 044996 522 PVMNQ------ESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANG 594 (678)
Q Consensus 522 ~~~~~------~~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~ 594 (678)
+.+.. .....++..|+|||++.+..++.++|||||||++|||+| |+.||.. ....+.........
T Consensus 232 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~--------~~~~~~~~~i~~~~ 303 (367)
T 3l9p_A 232 RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS--------KSNQEVLEFVTSGG 303 (367)
T ss_dssp HHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT--------CCHHHHHHHHHTTC
T ss_pred cccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--------CCHHHHHHHHHcCC
Confidence 75422 122345778999999998999999999999999999998 9999962 22233333222221
Q ss_pred CccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhcc
Q 044996 595 DNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKER 649 (678)
Q Consensus 595 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 649 (678)
... ........+.+++.+||+.||.+|||+.||++.|+.+...
T Consensus 304 ~~~------------~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 304 RMD------------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp CCC------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCC------------CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 110 0111233577888899999999999999999999988664
No 42
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.2e-41 Score=355.77 Aligned_cols=238 Identities=20% Similarity=0.317 Sum_probs=191.4
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccC-hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCC
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMN-NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRS 451 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gs 451 (678)
.+.||+|+||+||+|.. .+++.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 15 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~ 94 (347)
T 3zgw_A 15 HETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGE 94 (347)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCB
T ss_pred EEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCCCCC
Confidence 46799999999999986 578999999987543 2334578999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc----
Q 044996 452 LAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE---- 527 (678)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~---- 527 (678)
|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||++......
T Consensus 95 L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~----givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~ 165 (347)
T 3zgw_A 95 LFDYIISQD-----RLSEEETRVVFRQIVSAVAYVHSQ----GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH 165 (347)
T ss_dssp HHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCCGGGEEECTTSCEEECCCTTCBC--------
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCcc
Confidence 999997653 489999999999999999999976 8999999999999999999999999998765432
Q ss_pred -ccccccceeeCccccccCCC-CCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhh
Q 044996 528 -SAQELMIAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEM 605 (678)
Q Consensus 528 -~~~~~~~~y~aPE~~~~~~~-t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l 605 (678)
....++..|+|||++.+..+ +.++|||||||++|||++|+.||. ..+.................
T Consensus 166 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~--------~~~~~~~~~~i~~~~~~~p~------ 231 (347)
T 3zgw_A 166 LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD--------DDNVMALYKKIMRGKYDVPK------ 231 (347)
T ss_dssp ------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSC--------CSSHHHHHHHHHHTCCCCCT------
T ss_pred ccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCC--------CCCHHHHHHHHHcCCCCCCC------
Confidence 22346789999999988775 899999999999999999999997 23444444444433211100
Q ss_pred hcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 606 ADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.....+.+++.+||+.||.+|||+.|+++
T Consensus 232 -------~~s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 232 -------WLSPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp -------TCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -------CCCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 11234567888999999999999999997
No 43
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2.7e-41 Score=357.37 Aligned_cols=253 Identities=23% Similarity=0.351 Sum_probs=203.4
Q ss_pred ccccCccCceeEEEEEec------CCceEEEEEeccc-ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEec
Q 044996 374 AEILGSGCFGSSYKASLS------TGAMMVVKRFKQM-NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEF 446 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey 446 (678)
.+.||+|+||.||+|+.. +++.||||.++.. .....+.|.+|++++++++||||+++++++.+.+..++||||
T Consensus 52 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 131 (343)
T 1luf_A 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEY 131 (343)
T ss_dssp EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEec
Confidence 467999999999999874 3478999999754 334467899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhccCCC-------------------CCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEe
Q 044996 447 VPKRSLAVNLHGHQAL-------------------GQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLL 507 (678)
Q Consensus 447 ~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl 507 (678)
+++|+|.+++...... ....+++.+++.|+.||+.||+|||+. +|+||||||+|||+
T Consensus 132 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~----~ivH~Dlkp~NIl~ 207 (343)
T 1luf_A 132 MAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER----KFVHRDLATRNCLV 207 (343)
T ss_dssp CTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEE
T ss_pred CCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC----CeecCCCCcceEEE
Confidence 9999999999864311 113699999999999999999999976 89999999999999
Q ss_pred cCCCceEEeecCCccccCcc------ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCC
Q 044996 508 NESLEPVLADYGLIPVMNQE------SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKAD 580 (678)
Q Consensus 508 ~~~~~~kl~DfGla~~~~~~------~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~ 580 (678)
++++.+||+|||+++..... ....++..|+|||++.+..++.++|||||||++|||+| |+.||..
T Consensus 208 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~-------- 279 (343)
T 1luf_A 208 GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG-------- 279 (343)
T ss_dssp CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT--------
T ss_pred CCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC--------
Confidence 99999999999998765432 22345678999999998899999999999999999999 9999862
Q ss_pred CChHHHHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccC
Q 044996 581 GDLASWVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERD 650 (678)
Q Consensus 581 ~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~ 650 (678)
....+...... .+... . ........+.+++.+||+.||.+|||+.||++.|+++.+..
T Consensus 280 ~~~~~~~~~~~-~~~~~-~----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 280 MAHEEVIYYVR-DGNIL-A----------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp SCHHHHHHHHH-TTCCC-C----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred CChHHHHHHHh-CCCcC-C----------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 22223332222 22111 0 01112345778888999999999999999999999987654
No 44
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.6e-41 Score=376.87 Aligned_cols=249 Identities=24% Similarity=0.389 Sum_probs=203.9
Q ss_pred hccccCccCceeEEEEEecC-CceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCC
Q 044996 373 SAEILGSGCFGSSYKASLST-GAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRS 451 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gs 451 (678)
..+.||+|+||.||+|.+.. +..||||.++... ...++|.+|+++|++++|||||+++++|...+..++|||||++|+
T Consensus 224 ~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~ 302 (495)
T 1opk_A 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 302 (495)
T ss_dssp EEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred eeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCC
Confidence 35679999999999998764 7889999997643 356789999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc---
Q 044996 452 LAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES--- 528 (678)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~--- 528 (678)
|.++++.... ..+++..++.|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 303 L~~~l~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~----~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 375 (495)
T 1opk_A 303 LLDYLRECNR---QEVSAVVLLYMATQISSAMEYLEKK----NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 375 (495)
T ss_dssp HHHHHHHSCT---TTSCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEEC
T ss_pred HHHHHHhcCc---CCCCHHHHHHHHHHHHHHHHHHHhC----CcccCCCChhhEEECCCCcEEEeecccceeccCCceee
Confidence 9999986432 2589999999999999999999976 79999999999999999999999999998765332
Q ss_pred --cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhh
Q 044996 529 --AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEM 605 (678)
Q Consensus 529 --~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l 605 (678)
...+++.|+|||++....++.++|||||||+||||+| |+.||... +..+.. ..+..+... .
T Consensus 376 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~--------~~~~~~-~~~~~~~~~-~------ 439 (495)
T 1opk_A 376 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--------DLSQVY-ELLEKDYRM-E------ 439 (495)
T ss_dssp CTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC--------CGGGHH-HHHHTTCCC-C------
T ss_pred cCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCC--------CHHHHH-HHHHcCCCC-C------
Confidence 1224578999999998899999999999999999999 99998622 111111 122221111 0
Q ss_pred hcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhcc
Q 044996 606 ADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKER 649 (678)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 649 (678)
.+......+.+++.+||+.||.+||||.||++.|+.+...
T Consensus 440 ----~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 440 ----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred ----CCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 0112234577888899999999999999999999987643
No 45
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.8e-41 Score=370.93 Aligned_cols=249 Identities=26% Similarity=0.405 Sum_probs=200.1
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCCHH
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLA 453 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL~ 453 (678)
.+.||+|+||.||+|.+..+..||||+++... ...++|.+|+++|++++||||+++++++.+ +..++|||||++|+|.
T Consensus 189 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~ 266 (452)
T 1fmk_A 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 266 (452)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHH
T ss_pred eeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHH
Confidence 46799999999999999888889999998643 346789999999999999999999999875 6789999999999999
Q ss_pred HHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc-----
Q 044996 454 VNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES----- 528 (678)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~----- 528 (678)
++++.... ..+++.+++.++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 267 ~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~----~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 339 (452)
T 1fmk_A 267 DFLKGETG---KYLRLPQLVDMAAQIASGMAYVERM----NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339 (452)
T ss_dssp HHHSHHHH---TTCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECGGGCEEECCCCTTC-----------
T ss_pred HHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhC----CeeCCCCChhhEEECCCCCEEECCCccceecCCCceeccc
Confidence 99975422 2589999999999999999999976 79999999999999999999999999998765321
Q ss_pred cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhc
Q 044996 529 AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMAD 607 (678)
Q Consensus 529 ~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~ 607 (678)
...++..|+|||++.++.++.++|||||||++|||+| |+.||.. ....+..... ..+... .
T Consensus 340 ~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~--------~~~~~~~~~i-~~~~~~-~-------- 401 (452)
T 1fmk_A 340 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG--------MVNREVLDQV-ERGYRM-P-------- 401 (452)
T ss_dssp ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT--------CCHHHHHHHH-HTTCCC-C--------
T ss_pred CCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCC--------CCHHHHHHHH-HcCCCC-C--------
Confidence 2234578999999998999999999999999999999 9999862 2222222222 222111 0
Q ss_pred ccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCC
Q 044996 608 ERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDG 651 (678)
Q Consensus 608 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~ 651 (678)
.+......+.+++.+||+.||++|||+.++++.|+++....+
T Consensus 402 --~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~ 443 (452)
T 1fmk_A 402 --CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443 (452)
T ss_dssp --CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred --CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCC
Confidence 011233457788889999999999999999999998875543
No 46
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=3.8e-41 Score=354.13 Aligned_cols=247 Identities=21% Similarity=0.386 Sum_probs=193.6
Q ss_pred ccccCccCceeEEEEEec-CCce----EEEEEeccc-ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEecc
Q 044996 374 AEILGSGCFGSSYKASLS-TGAM----MVVKRFKQM-NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFV 447 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~ 447 (678)
.++||+|+||+||+|.+. ++.. |++|.++.. .....++|.+|+.++++++||||++++++|... ..++|+||+
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~v~e~~ 98 (327)
T 3poz_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLM 98 (327)
T ss_dssp EEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEEEEECC
T ss_pred ceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEEEEEec
Confidence 467999999999999863 3433 578877643 234567899999999999999999999999865 478999999
Q ss_pred CCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc
Q 044996 448 PKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE 527 (678)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 527 (678)
++|+|.+++..... .+++..++.|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 99 ~~g~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~LH~~----~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 99 PFGCLLDYVREHKD----NIGSQYLLNWCVQIAKGMNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp TTCBHHHHHHHSTT----SCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred CCCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHhhC----CeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 99999999987542 599999999999999999999976 7999999999999999999999999999765433
Q ss_pred c------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCccccc
Q 044996 528 S------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRTEV 600 (678)
Q Consensus 528 ~------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 600 (678)
. ...++..|+|||++.+..++.++|||||||++|||+| |+.||..... ..+ ...+..+...
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-----~~~----~~~~~~~~~~--- 238 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-----SEI----SSILEKGERL--- 238 (327)
T ss_dssp CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGH----HHHHHTTCCC---
T ss_pred cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH-----HHH----HHHHHcCCCC---
Confidence 2 2234668999999999999999999999999999999 9999972211 111 1222222111
Q ss_pred cchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhcc
Q 044996 601 FDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKER 649 (678)
Q Consensus 601 ~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 649 (678)
.........+.+++.+||+.||.+||+|.|+++.|+++...
T Consensus 239 --------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 239 --------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp --------CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred --------CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 00112234578888899999999999999999999988653
No 47
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=3.4e-41 Score=347.76 Aligned_cols=247 Identities=21% Similarity=0.303 Sum_probs=199.9
Q ss_pred ccccCccCceeEEEEEecC-C-------ceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEe
Q 044996 374 AEILGSGCFGSSYKASLST-G-------AMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHE 445 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 445 (678)
.+.||+|+||.||+|.... + ..||+|.+........+.+.+|++++++++||||+++++++...+..++|||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 92 (289)
T 4fvq_A 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQE 92 (289)
T ss_dssp EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEE
T ss_pred eeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEE
Confidence 4679999999999997643 3 4699999987666777889999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCc--------eEEee
Q 044996 446 FVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLE--------PVLAD 517 (678)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~--------~kl~D 517 (678)
|+++|+|.+++..... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++. +||+|
T Consensus 93 ~~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~----~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D 164 (289)
T 4fvq_A 93 FVKFGSLDTYLKKNKN----CINILWKLEVAKQLAAAMHFLEEN----TLIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164 (289)
T ss_dssp CCTTCBHHHHHHHTGG----GCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred CCCCCCHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHhhC----CeECCCcCcceEEEecCCcccccccceeeecc
Confidence 9999999999986532 489999999999999999999976 7999999999999998887 99999
Q ss_pred cCCccccCccccccccceeeCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCc
Q 044996 518 YGLIPVMNQESAQELMIAYKSPEFLQL-GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDN 596 (678)
Q Consensus 518 fGla~~~~~~~~~~~~~~y~aPE~~~~-~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 596 (678)
||+++.........++..|+|||++.+ ..++.++|||||||++|||++|..|+.. ........ ........
T Consensus 165 fg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~-------~~~~~~~~-~~~~~~~~ 236 (289)
T 4fvq_A 165 PGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS-------ALDSQRKL-QFYEDRHQ 236 (289)
T ss_dssp CCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTT-------TSCHHHHH-HHHHTTCC
T ss_pred CcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcc-------ccchHHHH-HHhhccCC
Confidence 999987766655567888999999987 6789999999999999999996554431 11111111 11111111
Q ss_pred cccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhcc
Q 044996 597 RTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKER 649 (678)
Q Consensus 597 ~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 649 (678)
... .....+.+++.+||+.||.+|||+.|+++.|+++..+
T Consensus 237 ~~~-------------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 237 LPA-------------PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp CCC-------------CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred CCC-------------CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 100 0112367788899999999999999999999987663
No 48
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=9.6e-41 Score=347.80 Aligned_cols=252 Identities=22% Similarity=0.377 Sum_probs=197.3
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEeccc--ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCC
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQM--NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRS 451 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gs 451 (678)
.+.||+|+||.||+|.... .+++|.++.. .....+.|.+|++++++++||||+++++++. .+..++||||+++|+
T Consensus 41 ~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~ 117 (307)
T 3lb7_A 41 STRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSS 117 (307)
T ss_dssp EEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCB
T ss_pred EeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEecCCCCc
Confidence 4679999999999998643 5788887743 3445678999999999999999999999874 566899999999999
Q ss_pred HHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc----
Q 044996 452 LAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE---- 527 (678)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~---- 527 (678)
|.+++..... .+++.+++.|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 118 L~~~l~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~----~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~ 189 (307)
T 3lb7_A 118 LYKHLHVQET----KFQMFQLIDIARQTAQGMDYLHAK----NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp HHHHHHTSCC----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCSSSEEECTTSCEEECCCCSSCC--------
T ss_pred HHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHhC----CEeeCCCChhhEEEcCCCCEEEccCCCceecccccccc
Confidence 9999975432 599999999999999999999976 7999999999999999999999999999765421
Q ss_pred --ccccccceeeCccccc---cCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccc
Q 044996 528 --SAQELMIAYKSPEFLQ---LGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFD 602 (678)
Q Consensus 528 --~~~~~~~~y~aPE~~~---~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d 602 (678)
....++..|+|||++. +..++.++|||||||++|||+||+.||... .-.+.+......+...
T Consensus 190 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~--------~~~~~~~~~~~~~~~~----- 256 (307)
T 3lb7_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHI--------NNRDQIIFMVGRGYAS----- 256 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTC--------CCHHHHHHHHHHTCCC-----
T ss_pred cccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccC--------CcHHHHHHHHhcCCCC-----
Confidence 2234678899999886 567899999999999999999999999721 1122222222222111
Q ss_pred hhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCC
Q 044996 603 KEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDG 651 (678)
Q Consensus 603 ~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~ 651 (678)
+.+... .......+.+++.+||+.+|++||++.||++.|+.+....+
T Consensus 257 ~~~~~~--~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 257 PDLSKL--YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp CCSTTS--CSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred cchhhh--hcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 111000 01123457788889999999999999999999999987654
No 49
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.1e-40 Score=339.60 Aligned_cols=247 Identities=22% Similarity=0.380 Sum_probs=204.2
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCCHH
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLA 453 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL~ 453 (678)
.+.||+|+||.||+|...++..||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (267)
T 3t9t_A 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLS 91 (267)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHH
T ss_pred eeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHH
Confidence 46799999999999998888899999997643 34578999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc-----
Q 044996 454 VNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES----- 528 (678)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~----- 528 (678)
+++..... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus 92 ~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 163 (267)
T 3t9t_A 92 DYLRTQRG----LFAAETLLGMCLDVCEGMAYLEEA----CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 163 (267)
T ss_dssp HHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred HHHhhCcc----cCCHHHHHHHHHHHHHHHHHHHhC----CcccCCCchheEEECCCCCEEEcccccccccccccccccc
Confidence 99976532 589999999999999999999976 79999999999999999999999999998664321
Q ss_pred cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhc
Q 044996 529 AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMAD 607 (678)
Q Consensus 529 ~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~ 607 (678)
...++..|+|||++.+..++.++||||||+++|||++ |+.||.. ................ ..+.
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~--------~~~~~~~~~i~~~~~~----~~~~--- 228 (267)
T 3t9t_A 164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN--------RSNSEVVEDISTGFRL----YKPR--- 228 (267)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT--------CCHHHHHHHHHTTCCC----CCCT---
T ss_pred cccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCC--------CCHHHHHHHHhcCCcC----CCCc---
Confidence 2234567999999998899999999999999999999 8999862 2223333332222110 0011
Q ss_pred ccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhcc
Q 044996 608 ERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKER 649 (678)
Q Consensus 608 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 649 (678)
.....+.+++.+||+.||.+|||+.|+++.|+++.+.
T Consensus 229 -----~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 229 -----LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp -----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -----cCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 1123467788899999999999999999999998764
No 50
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.9e-41 Score=359.54 Aligned_cols=254 Identities=22% Similarity=0.321 Sum_probs=201.0
Q ss_pred hccccCccCceeEEEEEe------cCCceEEEEEeccc-ChhhHHHHHHHHHHHhcc-CCCCccceeEEEEeCCc-eEEE
Q 044996 373 SAEILGSGCFGSSYKASL------STGAMMVVKRFKQM-NNVGREEFQEHMRRLGRL-RHPNLLPLVAYYYRKEE-KLLV 443 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~-~~lv 443 (678)
..+.||+|+||.||+|++ .+++.||||+++.. .....+.+.+|++++.++ +|||||+++++|...+. .++|
T Consensus 26 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv 105 (359)
T 3vhe_A 26 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 105 (359)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEE
T ss_pred eceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEE
Confidence 356799999999999974 34578999999764 334457799999999999 79999999999987654 8999
Q ss_pred EeccCCCCHHHHhhccCCCC------------------------------------------------------------
Q 044996 444 HEFVPKRSLAVNLHGHQALG------------------------------------------------------------ 463 (678)
Q Consensus 444 ~Ey~~~gsL~~~l~~~~~~~------------------------------------------------------------ 463 (678)
|||+++|+|.++++......
T Consensus 106 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (359)
T 3vhe_A 106 VEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDL 185 (359)
T ss_dssp EECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CT
T ss_pred EEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccch
Confidence 99999999999998653210
Q ss_pred -CCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc------ccccccee
Q 044996 464 -QPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES------AQELMIAY 536 (678)
Q Consensus 464 -~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~------~~~~~~~y 536 (678)
...+++..++.|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...++..|
T Consensus 186 ~~~~l~~~~~~~~~~ql~~aL~~LH~~----~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y 261 (359)
T 3vhe_A 186 YKDFLTLEHLICYSFQVAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 261 (359)
T ss_dssp TTTCBCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGG
T ss_pred hccccCHHHHHHHHHHHHHHHHHHHHC----CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCcee
Confidence 11288999999999999999999976 79999999999999999999999999998654321 22356789
Q ss_pred eCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhcccCCHHHH
Q 044996 537 KSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMADERNSEGEM 615 (678)
Q Consensus 537 ~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 615 (678)
+|||++.+..++.++|||||||++|||+| |+.||... .....+...+..+... .. .....
T Consensus 262 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~--------~~~~~~~~~~~~~~~~-~~----------~~~~~ 322 (359)
T 3vhe_A 262 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV--------KIDEEFCRRLKEGTRM-RA----------PDYTT 322 (359)
T ss_dssp CCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC--------CCSHHHHHHHHHTCCC-CC----------CTTCC
T ss_pred EChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCcc--------chhHHHHHHHHcCCCC-CC----------CCCCC
Confidence 99999998999999999999999999999 99999621 1112222222222111 00 01122
Q ss_pred HHHHHHHhhcCccccccCCCHHHHHHHHHHhhcc
Q 044996 616 VKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKER 649 (678)
Q Consensus 616 ~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 649 (678)
..+.+++.+||+.||.+||||.||++.|+++...
T Consensus 323 ~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 323 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 3477888899999999999999999999998753
No 51
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.7e-40 Score=343.71 Aligned_cols=254 Identities=17% Similarity=0.272 Sum_probs=203.0
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEeccc---ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQM---NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.+.||+|+||.||+|+. .++..||+|.+... .....+.|.+|+.++++++||||+++++++...+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 95 (294)
T 4eqm_A 16 VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEG 95 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCC
Confidence 46799999999999986 46889999998542 234457899999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc-
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES- 528 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~- 528 (678)
|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 96 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 166 (294)
T 4eqm_A 96 PTLSEYIESHG-----PLSVDTAINFTNQILDGIKHAHDM----RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166 (294)
T ss_dssp CBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence 99999997653 589999999999999999999976 79999999999999999999999999998765432
Q ss_pred ----cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchh
Q 044996 529 ----AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKE 604 (678)
Q Consensus 529 ----~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 604 (678)
...++..|+|||++.+..++.++|||||||++|||+||+.||.. ................. ....
T Consensus 167 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~--------~~~~~~~~~~~~~~~~~---~~~~ 235 (294)
T 4eqm_A 167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNG--------ETAVSIAIKHIQDSVPN---VTTD 235 (294)
T ss_dssp --------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCS--------SCHHHHHHHHHSSCCCC---HHHH
T ss_pred cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC--------CChHHHHHHHhhccCCC---cchh
Confidence 22467889999999998999999999999999999999999972 22233333333222110 0011
Q ss_pred hhcccCCHHHHHHHHHHHhhcCccccccCC-CHHHHHHHHHHhhccCCC
Q 044996 605 MADERNSEGEMVKLLKIGLACCEEEVEKRL-DLKEAVEKIEEVKERDGD 652 (678)
Q Consensus 605 l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-s~~ev~~~L~~i~~~~~~ 652 (678)
. .......+.+++.+|++.||.+|| +++++.+.|+.+......
T Consensus 236 ~-----~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~ 279 (294)
T 4eqm_A 236 V-----RKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRA 279 (294)
T ss_dssp S-----CTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSST
T ss_pred c-----ccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccC
Confidence 1 111234577888899999999999 999999999987665443
No 52
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-40 Score=351.36 Aligned_cols=254 Identities=20% Similarity=0.389 Sum_probs=199.7
Q ss_pred ccccCccCceeEEEEEecC-----CceEEEEEeccc-ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEecc
Q 044996 374 AEILGSGCFGSSYKASLST-----GAMMVVKRFKQM-NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFV 447 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~ 447 (678)
.+.||+|+||.||+|.... +..||+|.++.. .......+.+|++++++++||||+++++++...+..++||||+
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 128 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYM 128 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCC
Confidence 4679999999999997643 235999998754 3345667999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc
Q 044996 448 PKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE 527 (678)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 527 (678)
++|+|.+++..... .+++.+++.++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 129 ~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 129 ENGALDKFLREKDG----EFSVLQLVGMLRGIAAGMKYLANM----NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp TTEEHHHHHHHTTT----CSCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred CCCcHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHhC----CeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 99999999976432 589999999999999999999976 7999999999999999999999999999876533
Q ss_pred c-------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCcccc
Q 044996 528 S-------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRTE 599 (678)
Q Consensus 528 ~-------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 599 (678)
. ...++..|+|||++.+..++.++|||||||++|||++ |+.||.. ....+...... .+... .
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~--------~~~~~~~~~~~-~~~~~-~ 270 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE--------LSNHEVMKAIN-DGFRL-P 270 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTT--------CCHHHHHHHHH-TTCCC-C
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCccc--------CCHHHHHHHHH-CCCcC-C
Confidence 1 1123567999999998899999999999999999999 9999962 22222222222 22111 0
Q ss_pred ccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCCCcc
Q 044996 600 VFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGDEDF 655 (678)
Q Consensus 600 ~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~~~~ 655 (678)
........+.+++.+||+.||.+||++.|+++.|+++.......+.
T Consensus 271 ----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~~~~ 316 (333)
T 1mqb_A 271 ----------TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKT 316 (333)
T ss_dssp ----------CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGGGGS
T ss_pred ----------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchhhhh
Confidence 0111234577888899999999999999999999998875544333
No 53
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.1e-41 Score=359.18 Aligned_cols=255 Identities=25% Similarity=0.393 Sum_probs=195.7
Q ss_pred ccccCccCceeEEEEEecC--C--ceEEEEEeccc-ChhhHHHHHHHHHHHhccCCCCccceeEEEEe-CCceEEEEecc
Q 044996 374 AEILGSGCFGSSYKASLST--G--AMMVVKRFKQM-NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR-KEEKLLVHEFV 447 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~--~--~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~-~~~~~lv~Ey~ 447 (678)
.++||+|+||.||+|.+.. + ..||+|.++.. .....++|.+|+.++++++||||++++++|.. .+..++||||+
T Consensus 94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~ 173 (373)
T 3c1x_A 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 173 (373)
T ss_dssp EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECC
T ss_pred CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECC
Confidence 4679999999999997632 2 36889988753 33456789999999999999999999999765 45789999999
Q ss_pred CCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc
Q 044996 448 PKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE 527 (678)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 527 (678)
++|+|.++++.... .+++.+++.++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.+...
T Consensus 174 ~~g~L~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~----~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 174 KHGDLRNFIRNETH----NPTVKDLIGFGLQVAKGMKFLASK----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp TTCBHHHHHHCTTC----CCBHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred CCCCHHHHHhhccc----CCCHHHHHHHHHHHHHHHHHHHHC----CEecCccchheEEECCCCCEEEeecccccccccc
Confidence 99999999976432 588999999999999999999976 8999999999999999999999999999865432
Q ss_pred c--------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCccc
Q 044996 528 S--------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRT 598 (678)
Q Consensus 528 ~--------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 598 (678)
. ...++..|+|||++.+..++.++|||||||++|||+| |..||.... ...+... .. .+...
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~-----~~~~~~~---~~-~~~~~- 315 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-----TFDITVY---LL-QGRRL- 315 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC-----SSCHHHH---HH-TTCCC-
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCC-----HHHHHHH---HH-cCCCC-
Confidence 1 1234567999999998999999999999999999999 677775221 1222222 11 11111
Q ss_pred cccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCCCccc
Q 044996 599 EVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGDEDFY 656 (678)
Q Consensus 599 ~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~~~~~ 656 (678)
..+ ......+.+++.+||+.||++|||+.|+++.|+++......+.+.
T Consensus 316 --~~p--------~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~~~ 363 (373)
T 3c1x_A 316 --LQP--------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYV 363 (373)
T ss_dssp --CCC--------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCCBC
T ss_pred --CCC--------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccccee
Confidence 011 112345778888999999999999999999999999887776553
No 54
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=7.7e-41 Score=351.02 Aligned_cols=255 Identities=23% Similarity=0.332 Sum_probs=191.2
Q ss_pred hccccCccCceeEEEEEecCCc----eEEEEEeccc--ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCce------
Q 044996 373 SAEILGSGCFGSSYKASLSTGA----MMVVKRFKQM--NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEK------ 440 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~~~~~----~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~------ 440 (678)
..+.||+|+||.||+|...... .||||.++.. .....+.+.+|++++++++||||+++++++......
T Consensus 27 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 106 (323)
T 3qup_A 27 LGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIP 106 (323)
T ss_dssp EEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CE
T ss_pred EeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCcc
Confidence 3567999999999999865432 7999998753 344567899999999999999999999999876655
Q ss_pred EEEEeccCCCCHHHHhhccCCCC-CCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecC
Q 044996 441 LLVHEFVPKRSLAVNLHGHQALG-QPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYG 519 (678)
Q Consensus 441 ~lv~Ey~~~gsL~~~l~~~~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfG 519 (678)
++||||+++|+|.+++....... ...+++.++..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||
T Consensus 107 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~----~ivH~Dikp~NIli~~~~~~kl~Dfg 182 (323)
T 3qup_A 107 MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR----NFIHRDLAARNCMLAEDMTVCVADFG 182 (323)
T ss_dssp EEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECTTSCEEECCCC
T ss_pred EEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC----CcccCCCCcceEEEcCCCCEEEeecc
Confidence 99999999999999997543211 22589999999999999999999976 89999999999999999999999999
Q ss_pred CccccCccc------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHh
Q 044996 520 LIPVMNQES------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLA 592 (678)
Q Consensus 520 la~~~~~~~------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~ 592 (678)
+++...... ...++..|+|||.+.+..++.++|||||||++|||++ |+.||... ...+.......
T Consensus 183 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~--------~~~~~~~~~~~ 254 (323)
T 3qup_A 183 LSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI--------ENAEIYNYLIG 254 (323)
T ss_dssp C-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--------CGGGHHHHHHT
T ss_pred ccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCcccc--------ChHHHHHHHhc
Confidence 997654322 2234567999999998999999999999999999999 99998722 11122222222
Q ss_pred cCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCC
Q 044996 593 NGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDG 651 (678)
Q Consensus 593 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~ 651 (678)
..... ........+.+++.+||+.||.+|||+.|+++.|+++.....
T Consensus 255 ~~~~~------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~ 301 (323)
T 3qup_A 255 GNRLK------------QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS 301 (323)
T ss_dssp TCCCC------------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred CCCCC------------CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence 21110 011223457788889999999999999999999999977543
No 55
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=8.8e-41 Score=357.49 Aligned_cols=242 Identities=23% Similarity=0.297 Sum_probs=195.2
Q ss_pred cccCccCceeEEEEEe-cCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCCHH
Q 044996 375 EILGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLA 453 (678)
Q Consensus 375 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL~ 453 (678)
++||+|+||.||+|.. .++..||+|+++.......+.+.+|++++++++||||+++++++...+..++||||+++|+|.
T Consensus 95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~ 174 (373)
T 2x4f_A 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELF 174 (373)
T ss_dssp EECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEH
T ss_pred eEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHH
Confidence 5799999999999986 468899999998766667788999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEe--cCCCceEEeecCCccccCccc---
Q 044996 454 VNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLL--NESLEPVLADYGLIPVMNQES--- 528 (678)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl--~~~~~~kl~DfGla~~~~~~~--- 528 (678)
+++..... .+++..+..++.||+.||+|||+. +|+||||||+|||+ ++++.+||+|||+++.+....
T Consensus 175 ~~l~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~ 246 (373)
T 2x4f_A 175 DRIIDESY----NLTELDTILFMKQICEGIRHMHQM----YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLK 246 (373)
T ss_dssp HHHHHTGG----GCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCC
T ss_pred HHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHC----CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccc
Confidence 99875432 589999999999999999999976 79999999999999 677899999999998765432
Q ss_pred cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhcc
Q 044996 529 AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMADE 608 (678)
Q Consensus 529 ~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~ 608 (678)
...++..|+|||++.+..++.++|||||||++|||++|+.||.. .+..+.+...+...... .+....
T Consensus 247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~--------~~~~~~~~~i~~~~~~~---~~~~~~-- 313 (373)
T 2x4f_A 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLG--------DNDAETLNNILACRWDL---EDEEFQ-- 313 (373)
T ss_dssp CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCC--------SSHHHHHHHHHHTCCCS---CSGGGT--
T ss_pred cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHHHhccCCC---Chhhhc--
Confidence 23467889999999988899999999999999999999999962 23333444444332211 111110
Q ss_pred cCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 609 RNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 609 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.....+.+++.+||+.||.+|||+.|+++
T Consensus 314 ----~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 314 ----DISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp ----TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ----cCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 11234677888999999999999999987
No 56
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=3.6e-40 Score=347.46 Aligned_cols=238 Identities=21% Similarity=0.255 Sum_probs=196.8
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEeccc---ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQM---NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.+.||+|+||+||+|+.. +++.||+|+++.. .....+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~g 89 (337)
T 1o6l_A 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG 89 (337)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 467999999999999865 6899999999753 233456788999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc--
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE-- 527 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~-- 527 (678)
|+|..++.... .+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 90 g~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~----~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 90 GELFFHLSRER-----VFTEERARFYGAEIVSALEYLHSR----DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp CBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CeecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence 99999997653 589999999999999999999976 8999999999999999999999999999764322
Q ss_pred --ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhh
Q 044996 528 --SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEM 605 (678)
Q Consensus 528 --~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l 605 (678)
....+|..|+|||++.+..++.++|||||||++|||++|+.||.. .+...............
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~--------~~~~~~~~~i~~~~~~~-------- 224 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN--------QDHERLFELILMEEIRF-------- 224 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHCCCCC--------
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCC--------CCHHHHHHHHHcCCCCC--------
Confidence 233468899999999999999999999999999999999999962 23333333333322111
Q ss_pred hcccCCHHHHHHHHHHHhhcCccccccCC-----CHHHHHH
Q 044996 606 ADERNSEGEMVKLLKIGLACCEEEVEKRL-----DLKEAVE 641 (678)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-----s~~ev~~ 641 (678)
+......+.+++.+||+.||.+|| ++.||++
T Consensus 225 -----p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 225 -----PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp -----CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -----CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 011123467777899999999999 8999876
No 57
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=8.9e-41 Score=343.40 Aligned_cols=248 Identities=21% Similarity=0.321 Sum_probs=190.5
Q ss_pred hccccCccCceeEEEEEecC----CceEEEEEeccc-ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEecc
Q 044996 373 SAEILGSGCFGSSYKASLST----GAMMVVKRFKQM-NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFV 447 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~ 447 (678)
..+.||+|+||.||+|.... +..|++|.++.. .....+.+.+|+.++++++||||+++++++. .+..++||||+
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~ 97 (281)
T 1mp8_A 19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELC 97 (281)
T ss_dssp EEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred EEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEEecC
Confidence 35679999999999998643 456899988753 3445678999999999999999999999984 56789999999
Q ss_pred CCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc
Q 044996 448 PKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE 527 (678)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 527 (678)
++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 98 ~~~~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (281)
T 1mp8_A 98 TLGELRSFLQVRKY----SLDLASLILYAYQLSTALAYLESK----RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169 (281)
T ss_dssp TTEEHHHHHHHTTT----TSCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred CCCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhC----CeecccccHHHEEECCCCCEEECccccccccCcc
Confidence 99999999976532 589999999999999999999976 8999999999999999999999999999876543
Q ss_pred c-----cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCcccccc
Q 044996 528 S-----AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVF 601 (678)
Q Consensus 528 ~-----~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 601 (678)
. ...++..|+|||++.+..++.++|||||||++|||++ |+.||.... ..+........ ... .
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~--------~~~~~~~i~~~-~~~-~-- 237 (281)
T 1mp8_A 170 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK--------NNDVIGRIENG-ERL-P-- 237 (281)
T ss_dssp ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCC--------GGGHHHHHHTT-CCC-C--
T ss_pred cccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCC--------HHHHHHHHHcC-CCC-C--
Confidence 2 2234567999999998899999999999999999997 999987321 11222222211 111 0
Q ss_pred chhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhcc
Q 044996 602 DKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKER 649 (678)
Q Consensus 602 d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 649 (678)
........+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 238 --------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 238 --------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp --------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0111234577888899999999999999999999998653
No 58
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.2e-40 Score=339.96 Aligned_cols=247 Identities=22% Similarity=0.307 Sum_probs=199.9
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEeccc--ChhhHHHHHHHHHHHhccCCCCccceeEEEEeC--CceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQM--NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRK--EEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~lv~Ey~~~ 449 (678)
.+.||+|+||.||+|+.. +..+|||+++.. .....+.|.+|+.++++++||||+++++++.+. +..++||||+++
T Consensus 15 ~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (271)
T 3kmu_A 15 LTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPY 93 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTT
T ss_pred HHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCC
Confidence 467999999999999985 888999998754 344567899999999999999999999999876 678999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCC--CcccCCCCCCEEecCCCceEEeecCCccccCcc
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLI--APHGHIKSSNVLLNESLEPVLADYGLIPVMNQE 527 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~--ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 527 (678)
|+|.++++.... ..+++.++..++.||+.||+|||+. + |+||||||+|||+++++.+||+|||+......
T Consensus 94 ~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~----~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~- 165 (271)
T 3kmu_A 94 GSLYNVLHEGTN---FVVDQSQAVKFALDMARGMAFLHTL----EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS- 165 (271)
T ss_dssp CBHHHHHHSCSS---CCCCHHHHHHHHHHHHHHHHHHTTS----SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC-
T ss_pred CcHHHHHhhccc---CCCCHHHHHHHHHHHHHHHHHHhcC----CCceecCCCccceEEEcCCcceeEEeccceeeecc-
Confidence 999999986532 2589999999999999999999965 5 99999999999999999999999988755433
Q ss_pred ccccccceeeCccccccCCCCC---cchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchh
Q 044996 528 SAQELMIAYKSPEFLQLGRITK---KTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKE 604 (678)
Q Consensus 528 ~~~~~~~~y~aPE~~~~~~~t~---ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 604 (678)
....++..|+|||++.+..++. ++|||||||++|||+||+.||.. ....+........+... .
T Consensus 166 ~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~--------~~~~~~~~~~~~~~~~~------~ 231 (271)
T 3kmu_A 166 PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFAD--------LSNMEIGMKVALEGLRP------T 231 (271)
T ss_dssp TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTT--------SCHHHHHHHHHHSCCCC------C
T ss_pred cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccc--------cChHHHHHHHHhcCCCC------C
Confidence 2345678999999998655544 89999999999999999999962 22233333333222111 1
Q ss_pred hhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhc
Q 044996 605 MADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKE 648 (678)
Q Consensus 605 l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 648 (678)
+ .......+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 232 ~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 232 I-----PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp C-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred C-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 1 11123357788889999999999999999999999865
No 59
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=8.2e-41 Score=356.99 Aligned_cols=260 Identities=18% Similarity=0.166 Sum_probs=199.9
Q ss_pred ccccCccCceeEEEEEecC------CceEEEEEecccChhh-----------HHHHHHHHHHHhccCCCCccceeEEEEe
Q 044996 374 AEILGSGCFGSSYKASLST------GAMMVVKRFKQMNNVG-----------REEFQEHMRRLGRLRHPNLLPLVAYYYR 436 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~H~niv~l~~~~~~ 436 (678)
.+.||+|+||.||+|.+.. ++.||||++....... ...+..|+..+..++||||+++++++..
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~ 119 (364)
T 3op5_A 40 GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLH 119 (364)
T ss_dssp EEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEE
T ss_pred EEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeee
Confidence 4679999999999998754 4789999987543211 1224456667788899999999999986
Q ss_pred C----CceEEEEeccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEec--CC
Q 044996 437 K----EEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN--ES 510 (678)
Q Consensus 437 ~----~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~--~~ 510 (678)
. ...+|||||+ +|+|.+++..... .+++.+++.|+.||+.||+|||+. +|+||||||+|||++ .+
T Consensus 120 ~~~~~~~~~lv~e~~-g~~L~~~~~~~~~----~l~~~~~~~i~~qi~~~l~~lH~~----~iiHrDlkp~Nill~~~~~ 190 (364)
T 3op5_A 120 DKNGKSYRFMIMDRF-GSDLQKIYEANAK----RFSRKTVLQLSLRILDILEYIHEH----EYVHGDIKASNLLLNYKNP 190 (364)
T ss_dssp EETTEEEEEEEEECE-EEEHHHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEEESSCT
T ss_pred ccCCcceEEEEEeCC-CCCHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC----CeEEecCCHHHEEEecCCC
Confidence 5 4489999999 9999999986432 599999999999999999999977 899999999999999 88
Q ss_pred CceEEeecCCccccCccc-----------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCC
Q 044996 511 LEPVLADYGLIPVMNQES-----------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKA 579 (678)
Q Consensus 511 ~~~kl~DfGla~~~~~~~-----------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~ 579 (678)
+.+||+|||+++.+.... ...+|..|+|||++.+..++.++|||||||++|||+||+.||.....
T Consensus 191 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~---- 266 (364)
T 3op5_A 191 DQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK---- 266 (364)
T ss_dssp TCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT----
T ss_pred CeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc----
Confidence 999999999997765432 12278899999999988999999999999999999999999973211
Q ss_pred CCChHHHHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCC
Q 044996 580 DGDLASWVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGD 652 (678)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~ 652 (678)
......+....... ...+++++.+..... ...+.+++..||+.||.+||++.+|++.|+++......
T Consensus 267 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~ 333 (364)
T 3op5_A 267 DPKYVRDSKIRYRE--NIASLMDKCFPAANA----PGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGS 333 (364)
T ss_dssp CHHHHHHHHHHHHH--CHHHHHHHHSCTTCC----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHhhh--hHHHHHHHhcccccC----HHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 11222222222211 122344444322222 34577788899999999999999999999998765443
No 60
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.1e-40 Score=340.44 Aligned_cols=246 Identities=24% Similarity=0.362 Sum_probs=187.3
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEecccCh----hhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNN----VGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.+.||+|+||.||+|... +..+|||+++.... ...+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 12 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 90 (271)
T 3dtc_A 12 EEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARG 90 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTT
T ss_pred eeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCC
Confidence 467999999999999874 88899999875322 2356789999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecC--------CCceEEeecCCc
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNE--------SLEPVLADYGLI 521 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~--------~~~~kl~DfGla 521 (678)
++|.+++... .+++..+..++.|++.||+|||+.. ..+|+||||||+|||++. ++.+||+|||++
T Consensus 91 ~~L~~~~~~~------~~~~~~~~~i~~~l~~~l~~lH~~~-~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~ 163 (271)
T 3dtc_A 91 GPLNRVLSGK------RIPPDILVNWAVQIARGMNYLHDEA-IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163 (271)
T ss_dssp EEHHHHHTSS------CCCHHHHHHHHHHHHHHHHHHHHSS-SSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-
T ss_pred CCHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHhCC-CCceeecCCchHHEEEecccccccccCcceEEccCCcc
Confidence 9999998632 5899999999999999999999861 012889999999999986 778999999999
Q ss_pred cccCccc--cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCcccc
Q 044996 522 PVMNQES--AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTE 599 (678)
Q Consensus 522 ~~~~~~~--~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 599 (678)
+...... ...++..|+|||++.+..++.++||||||+++|||++|+.||... .-.............. .
T Consensus 164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--------~~~~~~~~~~~~~~~~-~ 234 (271)
T 3dtc_A 164 REWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGI--------DGLAVAYGVAMNKLAL-P 234 (271)
T ss_dssp ------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTS--------CHHHHHHHHHTSCCCC-C
T ss_pred cccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHhhhcCCCCC-C
Confidence 7655432 334678899999999889999999999999999999999999621 1112222222111111 0
Q ss_pred ccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHh
Q 044996 600 VFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEV 646 (678)
Q Consensus 600 ~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i 646 (678)
........+.+++.+||+.||.+|||+.|+++.|+++
T Consensus 235 ----------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 235 ----------IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp ----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred ----------CCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 0111234577888899999999999999999999864
No 61
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.5e-40 Score=350.69 Aligned_cols=261 Identities=21% Similarity=0.327 Sum_probs=204.9
Q ss_pred hccccCccCceeEEEEEec--------CCceEEEEEeccc-ChhhHHHHHHHHHHHhcc-CCCCccceeEEEEeCCceEE
Q 044996 373 SAEILGSGCFGSSYKASLS--------TGAMMVVKRFKQM-NNVGREEFQEHMRRLGRL-RHPNLLPLVAYYYRKEEKLL 442 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 442 (678)
..+.||+|+||.||+|... ++..||+|+++.. .....+.+.+|+++++++ +||||+++++++...+..++
T Consensus 39 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 118 (334)
T 2pvf_A 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 118 (334)
T ss_dssp EEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEE
T ss_pred EeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEE
Confidence 3567999999999999863 4678999999754 334567899999999999 89999999999999999999
Q ss_pred EEeccCCCCHHHHhhccCCC-----------CCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCC
Q 044996 443 VHEFVPKRSLAVNLHGHQAL-----------GQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESL 511 (678)
Q Consensus 443 v~Ey~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~ 511 (678)
||||+++|+|.+++...... ....+++.+++.++.||+.||+|||+. +|+||||||+|||++.++
T Consensus 119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dlkp~NIll~~~~ 194 (334)
T 2pvf_A 119 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ----KCIHRDLAARNVLVTENN 194 (334)
T ss_dssp EEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTC
T ss_pred EEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC----CeeCCCCccceEEEcCCC
Confidence 99999999999999865421 112489999999999999999999976 899999999999999999
Q ss_pred ceEEeecCCccccCccc------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChH
Q 044996 512 EPVLADYGLIPVMNQES------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLA 584 (678)
Q Consensus 512 ~~kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~ 584 (678)
.+||+|||+++...... ...++..|+|||++.+..++.++|||||||++|||+| |+.||.. ....
T Consensus 195 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~--------~~~~ 266 (334)
T 2pvf_A 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG--------IPVE 266 (334)
T ss_dssp CEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT--------CCHH
T ss_pred CEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCc--------CCHH
Confidence 99999999997664321 2234577999999988889999999999999999999 9999862 2333
Q ss_pred HHHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCCCcccc
Q 044996 585 SWVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGDEDFYS 657 (678)
Q Consensus 585 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~~~~~~ 657 (678)
+......... .. . ........+.+++.+||+.||.+|||+.|+++.|+++......++++.
T Consensus 267 ~~~~~~~~~~-~~-~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~~~~~~ 327 (334)
T 2pvf_A 267 ELFKLLKEGH-RM-D----------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLD 327 (334)
T ss_dssp HHHHHHHHTC-CC-C----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC------
T ss_pred HHHHHHhcCC-CC-C----------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccccCcccC
Confidence 3332222211 11 0 011123457788889999999999999999999999988776665543
No 62
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.4e-40 Score=347.24 Aligned_cols=257 Identities=23% Similarity=0.343 Sum_probs=205.7
Q ss_pred hccccCccCceeEEEEEe------cCCceEEEEEecccC-hhhHHHHHHHHHHHhcc-CCCCccceeEEEEeCCceEEEE
Q 044996 373 SAEILGSGCFGSSYKASL------STGAMMVVKRFKQMN-NVGREEFQEHMRRLGRL-RHPNLLPLVAYYYRKEEKLLVH 444 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 444 (678)
..+.||+|+||.||+|.. .++..||+|.++... ....+.+.+|+++++++ +||||+++++++...+..++||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 106 (313)
T 1t46_A 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 106 (313)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEE
Confidence 356799999999999975 346789999997543 34567899999999999 9999999999999999999999
Q ss_pred eccCCCCHHHHhhccCCC-------------CCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCC
Q 044996 445 EFVPKRSLAVNLHGHQAL-------------GQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESL 511 (678)
Q Consensus 445 Ey~~~gsL~~~l~~~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~ 511 (678)
||+++|+|.+++...... ....+++.+++.++.||+.||+|||+. +|+||||||+|||+++++
T Consensus 107 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dlkp~Nil~~~~~ 182 (313)
T 1t46_A 107 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK----NCIHRDLAARNILLTHGR 182 (313)
T ss_dssp ECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEEETTT
T ss_pred ecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC----CeecCCCccceEEEcCCC
Confidence 999999999999865321 112489999999999999999999976 899999999999999999
Q ss_pred ceEEeecCCccccCcccc------ccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChH
Q 044996 512 EPVLADYGLIPVMNQESA------QELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLA 584 (678)
Q Consensus 512 ~~kl~DfGla~~~~~~~~------~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~ 584 (678)
.+||+|||+++....... ..++..|+|||++.+..++.++|||||||++|||+| |+.||... ...
T Consensus 183 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~--------~~~ 254 (313)
T 1t46_A 183 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM--------PVD 254 (313)
T ss_dssp EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC--------CSS
T ss_pred CEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcc--------cch
Confidence 999999999987654321 234567999999988899999999999999999999 99998621 111
Q ss_pred HHHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCC
Q 044996 585 SWVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGD 652 (678)
Q Consensus 585 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~ 652 (678)
..+......+... . ........+.+++.+||+.||.+|||+.|+++.|+++.....+
T Consensus 255 ~~~~~~~~~~~~~--~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 311 (313)
T 1t46_A 255 SKFYKMIKEGFRM--L---------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 311 (313)
T ss_dssp HHHHHHHHHTCCC--C---------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTCC
T ss_pred hHHHHHhccCCCC--C---------CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhhc
Confidence 2222222222111 0 0111234577888899999999999999999999998876543
No 63
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.7e-40 Score=351.92 Aligned_cols=241 Identities=23% Similarity=0.319 Sum_probs=197.8
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccC---hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMN---NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.+.||+|+||.||+|+. .+++.||||++.... ....+++.+|++++++++||||+++++++...+..++||||+.
T Consensus 59 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~- 137 (348)
T 1u5q_A 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL- 137 (348)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred eeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-
Confidence 46799999999999986 578899999987532 2334678999999999999999999999999999999999997
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcccc
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESA 529 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 529 (678)
|+|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 138 g~l~~~l~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~ 209 (348)
T 1u5q_A 138 GSASDLLEVHKK----PLQEVEIAAVTHGALQGLAYLHSH----NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS 209 (348)
T ss_dssp EEHHHHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCC
T ss_pred CCHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC----CeeeCCCCHHHEEECCCCCEEEeeccCceecCCCCc
Confidence 788888865432 589999999999999999999977 799999999999999999999999999988876666
Q ss_pred ccccceeeCccccc---cCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhh
Q 044996 530 QELMIAYKSPEFLQ---LGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMA 606 (678)
Q Consensus 530 ~~~~~~y~aPE~~~---~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~ 606 (678)
..++..|+|||++. .+.++.++|||||||++|||++|+.||.. ......+.......... +.
T Consensus 210 ~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~--------~~~~~~~~~~~~~~~~~-------~~ 274 (348)
T 1u5q_A 210 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN--------MNAMSALYHIAQNESPA-------LQ 274 (348)
T ss_dssp CCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTT--------SCHHHHHHHHHHSCCCC-------CC
T ss_pred ccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCC--------CChHHHHHHHHhcCCCC-------CC
Confidence 67889999999884 56789999999999999999999999862 23333333333322111 10
Q ss_pred cccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHH
Q 044996 607 DERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEK 642 (678)
Q Consensus 607 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~ 642 (678)
... ....+.+++.+||+.||++|||+.++++.
T Consensus 275 ~~~----~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 275 SGH----WSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp CTT----SCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred CCC----CCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 111 12346778889999999999999999864
No 64
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=6e-41 Score=375.68 Aligned_cols=250 Identities=26% Similarity=0.401 Sum_probs=204.1
Q ss_pred hccccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCCH
Q 044996 373 SAEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSL 452 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL 452 (678)
..+.||+|+||.||+|.+..+..||||+++... ...++|.+|+++|++++|||||++++++.+ +..+||||||++|+|
T Consensus 271 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL 348 (535)
T 2h8h_A 271 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL 348 (535)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEH
T ss_pred hheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcH
Confidence 356799999999999999888889999998643 346789999999999999999999999865 678999999999999
Q ss_pred HHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc----
Q 044996 453 AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES---- 528 (678)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~---- 528 (678)
.++|+.... ..+++.+++.|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.+....
T Consensus 349 ~~~l~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~----~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 421 (535)
T 2h8h_A 349 LDFLKGETG---KYLRLPQLVDMAAQIASGMAYVERM----NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 421 (535)
T ss_dssp HHHHSHHHH---TTCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTT
T ss_pred HHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHHHhC----CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecc
Confidence 999975422 1589999999999999999999976 79999999999999999999999999998765431
Q ss_pred -cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhh
Q 044996 529 -AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMA 606 (678)
Q Consensus 529 -~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~ 606 (678)
...++..|+|||++....++.++|||||||+||||+| |+.||.. ....+.+... ..+... .
T Consensus 422 ~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~--------~~~~~~~~~i-~~~~~~-~------- 484 (535)
T 2h8h_A 422 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG--------MVNREVLDQV-ERGYRM-P------- 484 (535)
T ss_dssp CSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTT--------CCHHHHHHHH-HTTCCC-C-------
T ss_pred cCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC--------CCHHHHHHHH-HcCCCC-C-------
Confidence 2234678999999998999999999999999999999 9999962 2222222222 222111 0
Q ss_pred cccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCC
Q 044996 607 DERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDG 651 (678)
Q Consensus 607 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~ 651 (678)
........+.+++.+||+.||++|||+.+|++.|+++....+
T Consensus 485 ---~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 526 (535)
T 2h8h_A 485 ---CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 526 (535)
T ss_dssp ---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCS
T ss_pred ---CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccC
Confidence 011223457788889999999999999999999998865443
No 65
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=345.79 Aligned_cols=253 Identities=22% Similarity=0.327 Sum_probs=195.1
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCCHH
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLA 453 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL~ 453 (678)
.+.||+|+||.||+|+.. ++.||+|++... ...+.|.+|++++++++||||+++++++. +..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~ 87 (307)
T 2eva_A 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLY 87 (307)
T ss_dssp EEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHH
T ss_pred eeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHH
Confidence 467999999999999874 788999998643 45678999999999999999999999885 4589999999999999
Q ss_pred HHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCc-eEEeecCCccccCcc-cccc
Q 044996 454 VNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLE-PVLADYGLIPVMNQE-SAQE 531 (678)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~-~kl~DfGla~~~~~~-~~~~ 531 (678)
+++..... .+.+++..++.++.|+++||+|||+.. ..+|+||||||+|||++.++. +||+|||+++..... ....
T Consensus 88 ~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~-~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~ 164 (307)
T 2eva_A 88 NVLHGAEP--LPYYTAAHAMSWCLQCSQGVAYLHSMQ-PKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK 164 (307)
T ss_dssp HHHHCSSS--EECCCHHHHHHHHHHHHHHHHHHHTCS-SSCCCCCCCSGGGEEEETTTTEEEECCCCC------------
T ss_pred HHHhccCC--CCccCHHHHHHHHHHHHHHHHHHHhCC-CCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccCC
Confidence 99986532 224789999999999999999999732 137999999999999998886 799999999765433 2335
Q ss_pred ccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhcccCC
Q 044996 532 LMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMADERNS 611 (678)
Q Consensus 532 ~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 611 (678)
++..|+|||++.+..++.++|||||||++|||+||+.||.... ........... .+... .. .
T Consensus 165 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~------~~~~~~~~~~~-~~~~~-~~----------~ 226 (307)
T 2eva_A 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIG------GPAFRIMWAVH-NGTRP-PL----------I 226 (307)
T ss_dssp CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTC------SSHHHHHHHHH-TTCCC-CC----------B
T ss_pred CCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhC------ccHHHHHHHHh-cCCCC-Cc----------c
Confidence 7889999999998899999999999999999999999997321 11111111111 11111 10 0
Q ss_pred HHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCC
Q 044996 612 EGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGD 652 (678)
Q Consensus 612 ~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~ 652 (678)
......+.+++.+||+.||.+|||+.|+++.|+.+......
T Consensus 227 ~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 267 (307)
T 2eva_A 227 KNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPG 267 (307)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCC
T ss_pred cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccC
Confidence 11223467788899999999999999999999999876554
No 66
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=378.00 Aligned_cols=246 Identities=21% Similarity=0.331 Sum_probs=198.8
Q ss_pred ccCccCceeEEEEEec---CCceEEEEEecccC-hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCC
Q 044996 376 ILGSGCFGSSYKASLS---TGAMMVVKRFKQMN-NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRS 451 (678)
Q Consensus 376 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gs 451 (678)
.||+|+||.||+|.+. ++..||||+++... ....++|.+|+++|++++|||||+++++|.. +..++|||||++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 6999999999999764 45679999998643 3457889999999999999999999999976 56999999999999
Q ss_pred HHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc---
Q 044996 452 LAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES--- 528 (678)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~--- 528 (678)
|.+++..... .+++.++..|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.+....
T Consensus 422 L~~~l~~~~~----~l~~~~~~~i~~qi~~~L~~LH~~----~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 493 (613)
T 2ozo_A 422 LHKFLVGKRE----EIPVSNVAELLHQVSMGMKYLEEK----NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYY 493 (613)
T ss_dssp HHHHHTTCTT----TSCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC------
T ss_pred HHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHHHC----CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCcee
Confidence 9999975432 599999999999999999999976 79999999999999999999999999998764332
Q ss_pred ----cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCccccccch
Q 044996 529 ----AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDK 603 (678)
Q Consensus 529 ----~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~ 603 (678)
...+++.|+|||++.+..++.++|||||||+||||+| |+.||... ...+... .+..+... .
T Consensus 494 ~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~--------~~~~~~~-~i~~~~~~-~---- 559 (613)
T 2ozo_A 494 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM--------KGPEVMA-FIEQGKRM-E---- 559 (613)
T ss_dssp --------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--------CSHHHHH-HHHTTCCC-C----
T ss_pred eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC--------CHHHHHH-HHHcCCCC-C----
Confidence 1223468999999998999999999999999999998 99999721 1222222 22222111 0
Q ss_pred hhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccC
Q 044996 604 EMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERD 650 (678)
Q Consensus 604 ~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~ 650 (678)
.+......+.+++.+||+.||++||++.+|++.|+.+....
T Consensus 560 ------~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~ 600 (613)
T 2ozo_A 560 ------CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 600 (613)
T ss_dssp ------CCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred ------CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 11123346788889999999999999999999999875543
No 67
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.5e-41 Score=353.52 Aligned_cols=260 Identities=22% Similarity=0.317 Sum_probs=199.9
Q ss_pred hccccCccCceeEEEEEe------cCCceEEEEEecccC-hhhHHHHHHHHHHHhcc-CCCCccceeEEEEeCCceEEEE
Q 044996 373 SAEILGSGCFGSSYKASL------STGAMMVVKRFKQMN-NVGREEFQEHMRRLGRL-RHPNLLPLVAYYYRKEEKLLVH 444 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 444 (678)
..+.||+|+||.||+|.. .++..||+|.++... ....+.+.+|+.++.++ +||||+++++++...+..++||
T Consensus 49 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 128 (344)
T 1rjb_A 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIF 128 (344)
T ss_dssp EEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEE
Confidence 457899999999999985 245679999997532 33456899999999999 8999999999999999999999
Q ss_pred eccCCCCHHHHhhccCCC------------------CCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEE
Q 044996 445 EFVPKRSLAVNLHGHQAL------------------GQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVL 506 (678)
Q Consensus 445 Ey~~~gsL~~~l~~~~~~------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NIL 506 (678)
||+++|+|.+++...... ....+++..++.++.||+.||+|||+. +|+||||||+|||
T Consensus 129 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dikp~NIl 204 (344)
T 1rjb_A 129 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK----SCVHRDLAARNVL 204 (344)
T ss_dssp ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT----TEEETTCSGGGEE
T ss_pred ecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC----CcccCCCChhhEE
Confidence 999999999999865321 012489999999999999999999976 8999999999999
Q ss_pred ecCCCceEEeecCCccccCccc------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCC
Q 044996 507 LNESLEPVLADYGLIPVMNQES------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKA 579 (678)
Q Consensus 507 l~~~~~~kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~ 579 (678)
++.++.+||+|||+++...... ...++..|+|||++.+..++.++|||||||++|||+| |+.||...
T Consensus 205 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~------ 278 (344)
T 1rjb_A 205 VTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI------ 278 (344)
T ss_dssp EETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC------
T ss_pred EcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC------
Confidence 9999999999999997664332 1234567999999988899999999999999999998 99999622
Q ss_pred CCChHHHHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCCCcc
Q 044996 580 DGDLASWVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGDEDF 655 (678)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~~~~ 655 (678)
.....+...+..+... . ........+.+++.+||+.||.+|||+.|+++.|+.+.....++.+
T Consensus 279 --~~~~~~~~~~~~~~~~-~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~~ 341 (344)
T 1rjb_A 279 --PVDANFYKLIQNGFKM-D----------QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEAMY 341 (344)
T ss_dssp --CCSHHHHHHHHTTCCC-C----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--------
T ss_pred --CcHHHHHHHHhcCCCC-C----------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHHHHh
Confidence 1112222333322111 0 0111234577788899999999999999999999999887665543
No 68
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-40 Score=354.67 Aligned_cols=243 Identities=21% Similarity=0.302 Sum_probs=199.0
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCCH
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSL 452 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL 452 (678)
.+.||+|+||.||+|... +++.+|+|.+..........+.+|+++|++++||||+++++++.+.+..++||||+++|+|
T Consensus 56 ~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L 135 (387)
T 1kob_A 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL 135 (387)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBH
T ss_pred EEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcH
Confidence 467999999999999864 6889999999876666677899999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecC--CCceEEeecCCccccCccc--
Q 044996 453 AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNE--SLEPVLADYGLIPVMNQES-- 528 (678)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~--~~~~kl~DfGla~~~~~~~-- 528 (678)
.+++..... .+++.++..++.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+++......
T Consensus 136 ~~~l~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~----givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~ 207 (387)
T 1kob_A 136 FDRIAAEDY----KMSEAEVINYMRQACEGLKHMHEH----SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 207 (387)
T ss_dssp HHHTTCTTC----CBCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred HHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhC----CeeecccchHHeEEecCCCCceEEEecccceecCCCcce
Confidence 999875432 589999999999999999999976 8999999999999974 5789999999998765432
Q ss_pred -cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhc
Q 044996 529 -AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMAD 607 (678)
Q Consensus 529 -~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~ 607 (678)
...+|..|+|||++.+..++.++|||||||++|||++|+.||.. ....+.+.......... ++...
T Consensus 208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~--------~~~~~~~~~i~~~~~~~----~~~~~- 274 (387)
T 1kob_A 208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG--------EDDLETLQNVKRCDWEF----DEDAF- 274 (387)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC--------SSHHHHHHHHHHCCCCC----CSSTT-
T ss_pred eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCC--------CCHHHHHHHHHhCCCCC----Ccccc-
Confidence 23568899999999988999999999999999999999999962 22233333333222111 11110
Q ss_pred ccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 608 ERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 608 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
......+.+++.+||+.||.+|||+.|+++
T Consensus 275 ----~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 275 ----SSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp ----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ----ccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 112235678888999999999999999987
No 69
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.5e-40 Score=347.06 Aligned_cols=253 Identities=23% Similarity=0.356 Sum_probs=202.5
Q ss_pred hccccCccCceeEEEEEe------cCCceEEEEEeccc-ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEe
Q 044996 373 SAEILGSGCFGSSYKASL------STGAMMVVKRFKQM-NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHE 445 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 445 (678)
..+.||+|+||.||+|.. .++..||||+++.. .....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 106 (314)
T 2ivs_A 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVE 106 (314)
T ss_dssp EEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEe
Confidence 356799999999999975 23578999998754 34456789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhccCCCC-------------------CCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEE
Q 044996 446 FVPKRSLAVNLHGHQALG-------------------QPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVL 506 (678)
Q Consensus 446 y~~~gsL~~~l~~~~~~~-------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NIL 506 (678)
|+++|+|.+++......+ ...+++.+++.++.||+.||+|||+. +|+||||||+|||
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~----~ivH~dikp~NIl 182 (314)
T 2ivs_A 107 YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM----KLVHRDLAARNIL 182 (314)
T ss_dssp CCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEE
T ss_pred ecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC----CCcccccchheEE
Confidence 999999999998654211 12488999999999999999999976 7999999999999
Q ss_pred ecCCCceEEeecCCccccCccc------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCC
Q 044996 507 LNESLEPVLADYGLIPVMNQES------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKA 579 (678)
Q Consensus 507 l~~~~~~kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~ 579 (678)
+++++.+||+|||+++...... ...++..|+|||++.+..++.++|||||||++|||+| |+.||....
T Consensus 183 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~----- 257 (314)
T 2ivs_A 183 VAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP----- 257 (314)
T ss_dssp EETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC-----
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC-----
Confidence 9999999999999997654321 2234577999999988889999999999999999999 999986221
Q ss_pred CCChHHHHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhcc
Q 044996 580 DGDLASWVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKER 649 (678)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 649 (678)
..... ..+..+... . ........+.+++.+||+.||.+||++.|+++.|+++...
T Consensus 258 ---~~~~~-~~~~~~~~~-~----------~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 258 ---PERLF-NLLKTGHRM-E----------RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp ---GGGHH-HHHHTTCCC-C----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ---HHHHH-HHhhcCCcC-C----------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 11111 112221111 0 0111234577888899999999999999999999998653
No 70
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=5.3e-40 Score=349.41 Aligned_cols=242 Identities=24% Similarity=0.331 Sum_probs=197.6
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccCh------hhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEec
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNN------VGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEF 446 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey 446 (678)
.+.||+|+||.||+|... +|..||+|.++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 17 ~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~ 96 (361)
T 2yab_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILEL 96 (361)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEc
Confidence 467999999999999865 688999999975432 2357899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCC----ceEEeecCCcc
Q 044996 447 VPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESL----EPVLADYGLIP 522 (678)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~----~~kl~DfGla~ 522 (678)
+++|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||+++++ .+||+|||+++
T Consensus 97 ~~gg~L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~----givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~ 167 (361)
T 2yab_A 97 VSGGELFDFLAQKE-----SLSEEEATSFIKQILDGVNYLHTK----KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (361)
T ss_dssp CCSCBHHHHHTTCS-----CCBHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred CCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence 99999999997542 589999999999999999999976 899999999999998877 79999999998
Q ss_pred ccCcc---ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCcccc
Q 044996 523 VMNQE---SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTE 599 (678)
Q Consensus 523 ~~~~~---~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 599 (678)
.+... ....++..|+|||++.+..++.++|||||||++|||++|+.||.. ....+...........
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~--------~~~~~~~~~i~~~~~~--- 236 (361)
T 2yab_A 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG--------DTKQETLANITAVSYD--- 236 (361)
T ss_dssp ECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC--------SSHHHHHHHHHTTCCC---
T ss_pred EcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHHHhcCCC---
Confidence 76543 233478899999999988999999999999999999999999962 2223333333322111
Q ss_pred ccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 600 VFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 600 ~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
+++..... ....+.+++.+||..||.+|||+.|+++
T Consensus 237 -~~~~~~~~-----~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 237 -FDEEFFSQ-----TSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp -CCHHHHTT-----SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -CCchhccC-----CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11221111 1234677888999999999999999985
No 71
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.2e-40 Score=344.68 Aligned_cols=243 Identities=22% Similarity=0.300 Sum_probs=197.2
Q ss_pred hccccCccCceeEEEEEec-CCceEEEEEecccCh------hhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEe
Q 044996 373 SAEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNN------VGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHE 445 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 445 (678)
..+.||+|+||.||+|... ++..||+|.++.... ...+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 15 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 94 (326)
T 2y0a_A 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILE 94 (326)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred eceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEE
Confidence 3567999999999999874 688999999875322 246789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCC----ceEEeecCCc
Q 044996 446 FVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESL----EPVLADYGLI 521 (678)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~----~~kl~DfGla 521 (678)
|+++|+|.+++.... .+++.++..++.||+.||.|||+. +|+||||||+|||+++++ .+||+|||++
T Consensus 95 ~~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~al~~lH~~----~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 95 LVAGGELFDFLAEKE-----SLTEEEATEFLKQILNGVYYLHSL----QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp CCCSCBHHHHHTTSS-----CCBHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred cCCCCCHHHHHHhcC-----CcCHHHHHHHHHHHHHHHHHHHHC----CeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 999999999997542 589999999999999999999976 899999999999999887 8999999999
Q ss_pred cccCcc---ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccc
Q 044996 522 PVMNQE---SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRT 598 (678)
Q Consensus 522 ~~~~~~---~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 598 (678)
+..... ....++..|+|||++.+..++.++|||||||++|||++|+.||.. ....+............
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~--------~~~~~~~~~~~~~~~~~- 236 (326)
T 2y0a_A 166 HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG--------DTKQETLANVSAVNYEF- 236 (326)
T ss_dssp EECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC--------SSHHHHHHHHHHTCCCC-
T ss_pred eECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCC--------CCHHHHHHHHHhcCCCc-
Confidence 876432 233467889999999988999999999999999999999999962 22223332222221111
Q ss_pred cccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 599 EVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 599 ~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
...... .....+.+++.+||+.||.+|||+.|+++
T Consensus 237 ---~~~~~~-----~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 237 ---EDEYFS-----NTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp ---CHHHHT-----TSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ---Cccccc-----cCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111111 11234677888999999999999999987
No 72
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=5.1e-40 Score=338.70 Aligned_cols=246 Identities=23% Similarity=0.375 Sum_probs=194.0
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccChhh-------HHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEe
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMNNVG-------REEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHE 445 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-------~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 445 (678)
.+.||+|+||.||+|+. .+++.||+|++....... .+.+.+|++++++++||||+++++++.+. .++|||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~lv~e 101 (287)
T 4f0f_A 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP--PRMVME 101 (287)
T ss_dssp EEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT--TEEEEE
T ss_pred hhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC--CeEEEE
Confidence 46799999999999987 478899999986432211 16789999999999999999999998554 379999
Q ss_pred ccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCC--CcccCCCCCCEEecCCCc-----eEEeec
Q 044996 446 FVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLI--APHGHIKSSNVLLNESLE-----PVLADY 518 (678)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~--ivHrdlk~~NILl~~~~~-----~kl~Df 518 (678)
|+++|+|.+++..... .+++..++.++.|++.||+|||+. + |+||||||+|||++.++. +||+||
T Consensus 102 ~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~l~~~l~~lH~~----~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 102 FVPCGDLYHRLLDKAH----PIKWSVKLRLMLDIALGIEYMQNQ----NPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp CCTTCBHHHHHHCTTS----CCCHHHHHHHHHHHHHHHHHHHTS----SSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred ecCCCCHHHHHhcccC----CccHHHHHHHHHHHHHHHHHHHhC----CCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 9999999998876432 599999999999999999999966 6 999999999999988776 999999
Q ss_pred CCccccCcc-ccccccceeeCccccc--cCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCC
Q 044996 519 GLIPVMNQE-SAQELMIAYKSPEFLQ--LGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595 (678)
Q Consensus 519 Gla~~~~~~-~~~~~~~~y~aPE~~~--~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 595 (678)
|+++..... ....++..|+|||++. ...++.++|||||||++|||++|+.||.... ..-..+.......+.
T Consensus 174 g~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~ 247 (287)
T 4f0f_A 174 GLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS------YGKIKFINMIREEGL 247 (287)
T ss_dssp TTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCC------CCHHHHHHHHHHSCC
T ss_pred CccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccc------ccHHHHHHHHhccCC
Confidence 999765543 2345678899999984 4557899999999999999999999997321 112222222222221
Q ss_pred ccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHh
Q 044996 596 NRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEV 646 (678)
Q Consensus 596 ~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i 646 (678)
.. .+ .......+.+++.+||+.||.+|||+.|+++.|+++
T Consensus 248 ~~------~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 248 RP------TI-----PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp CC------CC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred CC------CC-----CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 11 11 112234577888899999999999999999999864
No 73
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-39 Score=343.90 Aligned_cols=259 Identities=20% Similarity=0.298 Sum_probs=196.4
Q ss_pred hccccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhc--cCCCCccceeEEEEeC----CceEEEEec
Q 044996 373 SAEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGR--LRHPNLLPLVAYYYRK----EEKLLVHEF 446 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~~----~~~~lv~Ey 446 (678)
..+.||+|+||.||+|+.. ++.||||++... ....+..|.+++.. ++||||+++++++... ...++||||
T Consensus 41 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~ 116 (337)
T 3mdy_A 41 MVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDY 116 (337)
T ss_dssp EEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECC
T ss_pred EEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEec
Confidence 3578999999999999875 889999998643 23444555555555 4999999999999887 678999999
Q ss_pred cCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhC----CCCCCcccCCCCCCEEecCCCceEEeecCCcc
Q 044996 447 VPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYREL----PSLIAPHGHIKSSNVLLNESLEPVLADYGLIP 522 (678)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~----~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 522 (678)
+++|+|.++++.. .+++..++.++.|++.||+|||..+ +..+|+||||||+|||++.++.+||+|||+++
T Consensus 117 ~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~ 190 (337)
T 3mdy_A 117 HENGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 190 (337)
T ss_dssp CTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred cCCCcHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCce
Confidence 9999999999754 4899999999999999999999641 12279999999999999999999999999997
Q ss_pred ccCccc--------cccccceeeCccccccCCCCCc------chHHHHHHHHHHHHhC----------CCCccccccCCC
Q 044996 523 VMNQES--------AQELMIAYKSPEFLQLGRITKK------TDVWSLGVLILEIMTG----------KFPANFLQQGKK 578 (678)
Q Consensus 523 ~~~~~~--------~~~~~~~y~aPE~~~~~~~t~k------sDvwS~Gvvl~el~tg----------~~P~~~~~~~~~ 578 (678)
.+.... ...++..|+|||++.+..++.+ +|||||||++|||+|| +.||......
T Consensus 191 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~-- 268 (337)
T 3mdy_A 191 KFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPS-- 268 (337)
T ss_dssp ECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS--
T ss_pred eeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCC--
Confidence 654332 2346789999999987766665 9999999999999999 5555422111
Q ss_pred CCCChHHHHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccC
Q 044996 579 ADGDLASWVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERD 650 (678)
Q Consensus 579 ~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~ 650 (678)
...... +......... .+.+.......+....+.+++.+||+.||.+|||+.||++.|+++.+..
T Consensus 269 -~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 269 -DPSYED-MREIVCIKKL-----RPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp -SCCHHH-HHHHHTTSCC-----CCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred -CCchhh-hHHHHhhhcc-----CccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 112222 2222211111 1111111112356777899999999999999999999999999998754
No 74
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.3e-40 Score=339.21 Aligned_cols=255 Identities=22% Similarity=0.320 Sum_probs=201.7
Q ss_pred ccccCccCceeEEEEEecC-C---ceEEEEEecccC-hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCce-EEEEecc
Q 044996 374 AEILGSGCFGSSYKASLST-G---AMMVVKRFKQMN-NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEK-LLVHEFV 447 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~-~lv~Ey~ 447 (678)
.++||+|+||+||+|...+ + ..+|+|.+.... ....+.|.+|++++++++||||+++++++.+.+.. ++||||+
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~ 105 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYM 105 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCC
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecc
Confidence 4679999999999997532 2 368999987543 34567899999999999999999999999876655 9999999
Q ss_pred CCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc
Q 044996 448 PKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE 527 (678)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 527 (678)
.+|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 106 ~~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~----~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 106 CHGDLLQFIRSPQ----RNPTVKDLISFGLQVARGMEYLAEQ----KFVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp TTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred cCCCHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHhC----CcccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 9999999997643 2589999999999999999999977 7999999999999999999999999999765432
Q ss_pred --------ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCcccc
Q 044996 528 --------SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTE 599 (678)
Q Consensus 528 --------~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 599 (678)
....++..|+|||.+.+..++.++|||||||++|||++|+.|+... .+..+...... .+... .
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~-------~~~~~~~~~~~-~~~~~-~ 248 (298)
T 3pls_A 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRH-------IDPFDLTHFLA-QGRRL-P 248 (298)
T ss_dssp GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTT-------SCGGGHHHHHH-TTCCC-C
T ss_pred cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCcc-------CCHHHHHHHhh-cCCCC-C
Confidence 1223567899999999989999999999999999999966664311 11111211111 11111 0
Q ss_pred ccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCCCcc
Q 044996 600 VFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGDEDF 655 (678)
Q Consensus 600 ~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~~~~ 655 (678)
........+.+++.+||+.||.+|||+.|+++.|+++......+.+
T Consensus 249 ----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~~~ 294 (298)
T 3pls_A 249 ----------QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDHY 294 (298)
T ss_dssp ----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSCCB
T ss_pred ----------CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhccch
Confidence 0111223577888899999999999999999999999887766554
No 75
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=4.5e-40 Score=340.97 Aligned_cols=253 Identities=25% Similarity=0.355 Sum_probs=198.5
Q ss_pred ccccCccCceeEEEEEecC----CceEEEEEecccC-hhhHHHHHHHHHHHhccCCCCccceeEEEEe-CCceEEEEecc
Q 044996 374 AEILGSGCFGSSYKASLST----GAMMVVKRFKQMN-NVGREEFQEHMRRLGRLRHPNLLPLVAYYYR-KEEKLLVHEFV 447 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~-~~~~~lv~Ey~ 447 (678)
.++||+|+||.||+|.... ...+++|.+.... ....+.+.+|+.++++++||||++++++|.. ++..++||||+
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~ 109 (298)
T 3f66_A 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 109 (298)
T ss_dssp EEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECC
T ss_pred cceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCC
Confidence 4679999999999998632 2358899887533 3456789999999999999999999999754 55789999999
Q ss_pred CCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc
Q 044996 448 PKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE 527 (678)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 527 (678)
++|+|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 110 ~~~~L~~~l~~~~~----~~~~~~~~~i~~ql~~~l~~lH~~----~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 110 KHGDLRNFIRNETH----NPTVKDLIGFGLQVAKGMKYLASK----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp TTCBHHHHHHCTTC----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred CCCCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHhC----CccCCCCchheEEECCCCCEEECccccccccccc
Confidence 99999999975432 589999999999999999999976 8999999999999999999999999999866433
Q ss_pred c--------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCccc
Q 044996 528 S--------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRT 598 (678)
Q Consensus 528 ~--------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 598 (678)
. ...++..|+|||.+.+..++.++||||||+++|||++ |..||.... ...+ ...........
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-----~~~~---~~~~~~~~~~~- 252 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-----TFDI---TVYLLQGRRLL- 252 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSC-----TTTH---HHHHHTTCCCC-
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCC-----HHHH---HHHHhcCCCCC-
Confidence 2 2234567999999998899999999999999999999 555554211 1121 22222111110
Q ss_pred cccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCCCc
Q 044996 599 EVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGDED 654 (678)
Q Consensus 599 ~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~~~ 654 (678)
.+ ......+.+++.+||+.||.+|||+.|+++.|+++......+.
T Consensus 253 ---~~--------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~~~ 297 (298)
T 3f66_A 253 ---QP--------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEH 297 (298)
T ss_dssp ---CC--------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCCSC
T ss_pred ---CC--------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhccCC
Confidence 01 1122357788889999999999999999999999988665543
No 76
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.6e-40 Score=339.94 Aligned_cols=250 Identities=21% Similarity=0.322 Sum_probs=202.1
Q ss_pred cccCccCceeEEEEEec---CCceEEEEEeccc-ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCC
Q 044996 375 EILGSGCFGSSYKASLS---TGAMMVVKRFKQM-NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKR 450 (678)
Q Consensus 375 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~g 450 (678)
+.||+|+||.||+|... ++..||+|.++.. .....+.+.+|++++++++||||+++++++ ..+..++||||+++|
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 94 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGG 94 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCC
Confidence 37999999999999753 5778999999864 344567899999999999999999999999 556799999999999
Q ss_pred CHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc--
Q 044996 451 SLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES-- 528 (678)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~-- 528 (678)
+|.+++..... .+++.++..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 95 ~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 166 (287)
T 1u59_A 95 PLHKFLVGKRE----EIPVSNVAELLHQVSMGMKYLEEK----NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 166 (287)
T ss_dssp EHHHHHTTCTT----TSCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred CHHHHHHhCCc----cCCHHHHHHHHHHHHHHHHHHHHC----CEeeCCCchheEEEcCCCCEEECcccceeeeccCcce
Confidence 99999975432 589999999999999999999976 89999999999999999999999999998764321
Q ss_pred -----cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCccccccc
Q 044996 529 -----AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFD 602 (678)
Q Consensus 529 -----~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d 602 (678)
...++..|+|||++.+..++.++|||||||++|||+| |+.||... ...+...... .+... .
T Consensus 167 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~--------~~~~~~~~i~-~~~~~-~--- 233 (287)
T 1u59_A 167 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM--------KGPEVMAFIE-QGKRM-E--- 233 (287)
T ss_dssp ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC--------CTHHHHHHHH-TTCCC-C---
T ss_pred eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC--------CHHHHHHHHh-cCCcC-C---
Confidence 1234678999999988889999999999999999999 99999621 2222222222 22111 0
Q ss_pred hhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCCC
Q 044996 603 KEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGDE 653 (678)
Q Consensus 603 ~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~~ 653 (678)
.+......+.+++.+||+.||.+||++.|+++.|+++....+..
T Consensus 234 -------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 277 (287)
T 1u59_A 234 -------CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 277 (287)
T ss_dssp -------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred -------CCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCc
Confidence 01122345778888999999999999999999999987655443
No 77
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=5.5e-40 Score=349.98 Aligned_cols=243 Identities=20% Similarity=0.252 Sum_probs=196.9
Q ss_pred hccccCccCceeEEEEEec-CCceEEEEEeccc--ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 373 SAEILGSGCFGSSYKASLS-TGAMMVVKRFKQM--NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
..+.||+|+||.||+|... ++..||+|++... .....+.+.+|++++++++|||||++++++.+.+..++||||+++
T Consensus 33 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g 112 (362)
T 2bdw_A 33 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 112 (362)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 3578999999999999864 6889999999753 334557789999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCC---CceEEeecCCccccCc
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNES---LEPVLADYGLIPVMNQ 526 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~---~~~kl~DfGla~~~~~ 526 (678)
|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||+++....
T Consensus 113 g~L~~~l~~~~-----~~~~~~~~~~~~qi~~al~~lH~~----~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 113 GELFEDIVARE-----FYSEADASHCIQQILESIAYCHSN----GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp CBHHHHHTTCS-----CCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 99999987542 589999999999999999999977 89999999999999865 4599999999987654
Q ss_pred cc---cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccch
Q 044996 527 ES---AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDK 603 (678)
Q Consensus 527 ~~---~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~ 603 (678)
.. ...++..|+|||++.+..++.++|||||||++|||++|+.||.. .+............... ..+
T Consensus 184 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~--------~~~~~~~~~i~~~~~~~---~~~ 252 (362)
T 2bdw_A 184 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD--------EDQHRLYAQIKAGAYDY---PSP 252 (362)
T ss_dssp CCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHTCCCC---CTT
T ss_pred CcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCC--------CCHHHHHHHHHhCCCCC---Ccc
Confidence 32 23568899999999988999999999999999999999999962 22233333333222111 011
Q ss_pred hhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 604 EMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 604 ~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.. ......+.+++.+||+.||++|||+.|+++
T Consensus 253 ~~------~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 253 EW------DTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp GG------GGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cc------cCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 11 011234677888999999999999999876
No 78
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6e-40 Score=343.91 Aligned_cols=242 Identities=20% Similarity=0.264 Sum_probs=198.2
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCCH
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSL 452 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL 452 (678)
.+.||+|+||.||+|... ++..+|+|.++.. ....+.+.+|+.+++.++||||+++++++.+.+..++||||+++|+|
T Consensus 10 ~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L 88 (321)
T 1tki_A 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDI 88 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBH
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCH
Confidence 467999999999999865 5788999988753 34556789999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecC--CCceEEeecCCccccCccc--
Q 044996 453 AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNE--SLEPVLADYGLIPVMNQES-- 528 (678)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~--~~~~kl~DfGla~~~~~~~-- 528 (678)
.+++..... .+++.++..++.||+.||.|||+. +|+||||||+|||++. ++.+||+|||+++.+....
T Consensus 89 ~~~l~~~~~----~~~~~~~~~i~~qi~~al~~lH~~----givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~ 160 (321)
T 1tki_A 89 FERINTSAF----ELNEREIVSYVHQVCEALQFLHSH----NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF 160 (321)
T ss_dssp HHHHTSSSC----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred HHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHC----CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcc
Confidence 999975432 589999999999999999999976 8999999999999997 7899999999998765432
Q ss_pred -cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhc
Q 044996 529 -AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMAD 607 (678)
Q Consensus 529 -~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~ 607 (678)
...++..|+|||++.+..++.++|||||||++|||++|+.||.. ....+.+.......... +.....
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~--------~~~~~~~~~i~~~~~~~----~~~~~~ 228 (321)
T 1tki_A 161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLA--------ETNQQIIENIMNAEYTF----DEEAFK 228 (321)
T ss_dssp EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCC--------SSHHHHHHHHHHTCCCC----CHHHHT
T ss_pred ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcC--------CCHHHHHHHHHcCCCCC----Chhhhc
Confidence 23467889999999888889999999999999999999999962 23334444444332111 111100
Q ss_pred ccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 608 ERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 608 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.....+.+++.+||+.||.+|||+.|+++
T Consensus 229 -----~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 229 -----EISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp -----TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -----cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11234677888999999999999999998
No 79
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.7e-40 Score=345.27 Aligned_cols=256 Identities=23% Similarity=0.328 Sum_probs=193.7
Q ss_pred hccccCccCceeEEEEEec----CCceEEEEEeccc--ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCC-----ceE
Q 044996 373 SAEILGSGCFGSSYKASLS----TGAMMVVKRFKQM--NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKE-----EKL 441 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~-----~~~ 441 (678)
..+.||+|+||.||+|... ++..||+|.++.. .....+.+.+|+.++++++||||+++++++...+ ..+
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 117 (313)
T 3brb_A 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPM 117 (313)
T ss_dssp EEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEE
T ss_pred eccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccE
Confidence 4578999999999999764 3457999998753 3444577999999999999999999999998755 359
Q ss_pred EEEeccCCCCHHHHhhccCC-CCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCC
Q 044996 442 LVHEFVPKRSLAVNLHGHQA-LGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGL 520 (678)
Q Consensus 442 lv~Ey~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl 520 (678)
+||||+++|+|.+++..... .....+++.+++.++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 118 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~dikp~NIli~~~~~~kl~Dfg~ 193 (313)
T 3brb_A 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR----NFLHRDLAARNCMLRDDMTVCVADFGL 193 (313)
T ss_dssp EEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT----TCCCCCCSGGGEEECTTSCEEECSCSC
T ss_pred EEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC----CcccCCCCcceEEEcCCCcEEEeecCc
Confidence 99999999999999864321 1234699999999999999999999965 899999999999999999999999999
Q ss_pred ccccCcc------ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhc
Q 044996 521 IPVMNQE------SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLAN 593 (678)
Q Consensus 521 a~~~~~~------~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~ 593 (678)
++..... ....++..|+|||.+.+..++.++||||||+++|||++ |+.||... ............
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~--------~~~~~~~~~~~~ 265 (313)
T 3brb_A 194 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGV--------QNHEMYDYLLHG 265 (313)
T ss_dssp C----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--------CGGGHHHHHHTT
T ss_pred ceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccC--------CHHHHHHHHHcC
Confidence 9765432 12234678999999998999999999999999999999 89998621 112222222221
Q ss_pred CCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCC
Q 044996 594 GDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGD 652 (678)
Q Consensus 594 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~ 652 (678)
. .. . ........+.+++.+||+.||.+|||+.++++.|+++....++
T Consensus 266 ~-~~-~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp~ 312 (313)
T 3brb_A 266 H-RL-K----------QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPD 312 (313)
T ss_dssp C-CC-C----------CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred C-CC-C----------CCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 1 11 0 0111234577888899999999999999999999999876543
No 80
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.3e-42 Score=356.74 Aligned_cols=258 Identities=21% Similarity=0.294 Sum_probs=184.6
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhc--cCCCCccceeEEEEeCC----ceEEEEecc
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGR--LRHPNLLPLVAYYYRKE----EKLLVHEFV 447 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~~~----~~~lv~Ey~ 447 (678)
.+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++.. ++||||+++++++.... ..++||||+
T Consensus 8 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 83 (303)
T 3gxj_A 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 83 (303)
T ss_dssp CEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred hhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEecc
Confidence 467999999999999874 889999998643 34567788888887 79999999999998876 789999999
Q ss_pred CCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHh----CCCCCCcccCCCCCCEEecCCCceEEeecCCccc
Q 044996 448 PKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE----LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPV 523 (678)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~----~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~ 523 (678)
++|+|.+++... .+++..++.++.|++.||+|||.. .+..+|+||||||+|||++.++.+||+|||+++.
T Consensus 84 ~~g~L~~~l~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~ 157 (303)
T 3gxj_A 84 EHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp TTCCHHHHHHHC------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-CC
T ss_pred CCCCHHHHHhcc------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCccee
Confidence 999999999754 478889999999999999999921 1123899999999999999999999999999976
Q ss_pred cCcccc--------ccccceeeCccccccC------CCCCcchHHHHHHHHHHHHhC----------CCCccccccCCCC
Q 044996 524 MNQESA--------QELMIAYKSPEFLQLG------RITKKTDVWSLGVLILEIMTG----------KFPANFLQQGKKA 579 (678)
Q Consensus 524 ~~~~~~--------~~~~~~y~aPE~~~~~------~~t~ksDvwS~Gvvl~el~tg----------~~P~~~~~~~~~~ 579 (678)
...... ..++..|+|||++.+. .++.++|||||||++|||+|| +.||........
T Consensus 158 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~- 236 (303)
T 3gxj_A 158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP- 236 (303)
T ss_dssp EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CC-
T ss_pred ccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCc-
Confidence 543322 2468899999998765 344689999999999999999 666653221111
Q ss_pred CCChHHHHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccC
Q 044996 580 DGDLASWVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERD 650 (678)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~ 650 (678)
............. ..+.+.......+....+.+++.+||+.||.+|||+.||++.|+++....
T Consensus 237 --~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 237 --SVEEMRKVVCEQK------LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp --CCC-CHHHHTTSC------CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred --cHHHHHHHHHHhh------cCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 1111111111111 11111111122356778999999999999999999999999999887644
No 81
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=341.03 Aligned_cols=264 Identities=20% Similarity=0.291 Sum_probs=205.7
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC-hhhHHHHHHHHHHHhccCCCCccceeEEEEeCC--ceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN-NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKE--EKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~~~lv~Ey~~~ 449 (678)
.++||+|+||+||+|... +++.||||+++... ....+.+.+|++++++++||||+++++++.... ..++||||+++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (319)
T 4euu_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93 (319)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTT
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCC
Confidence 467999999999999875 48899999997543 344677889999999999999999999998765 67999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEe----cCCCceEEeecCCccccC
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLL----NESLEPVLADYGLIPVMN 525 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl----~~~~~~kl~DfGla~~~~ 525 (678)
|+|.+++...... ..+++.++..|+.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++...
T Consensus 94 ~~L~~~l~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~----~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~ 167 (319)
T 4euu_A 94 GSLYTVLEEPSNA--YGLPESEFLIVLRDVVGGMNHLREN----GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (319)
T ss_dssp CBHHHHHHSGGGT--TCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred CCHHHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHHC----CEecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence 9999999865431 2489999999999999999999976 89999999999999 888899999999998765
Q ss_pred ccc---cccccceeeCccccc--------cCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcC
Q 044996 526 QES---AQELMIAYKSPEFLQ--------LGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANG 594 (678)
Q Consensus 526 ~~~---~~~~~~~y~aPE~~~--------~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~ 594 (678)
... ...++..|+|||++. +..++.++|||||||++|||+||+.||..... .....+.+...+...
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----~~~~~~~~~~~~~~~ 243 (319)
T 4euu_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG----PRRNKEVMYKIITGK 243 (319)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTC----GGGCHHHHHHHHHHC
T ss_pred CCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc----cchhHHHHHHHhcCC
Confidence 432 234678999999886 46789999999999999999999999973221 122233344443322
Q ss_pred Cc--cccc---------cchhhh-cccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhh
Q 044996 595 DN--RTEV---------FDKEMA-DERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVK 647 (678)
Q Consensus 595 ~~--~~~~---------~d~~l~-~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~ 647 (678)
.. ...+ .++.+. ...........+.+++.+||+.||++|||++|+++...+..
T Consensus 244 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred CcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 11 0000 000111 01123455667888999999999999999999999887653
No 82
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=4.2e-40 Score=346.63 Aligned_cols=254 Identities=13% Similarity=0.094 Sum_probs=202.7
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccChhhHHHHHHHHHHHhcc-CCCCccceeEEEEeCCceEEEEeccCCCC
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRLGRL-RHPNLLPLVAYYYRKEEKLLVHEFVPKRS 451 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~Ey~~~gs 451 (678)
.+.||+|+||.||+|.. .+++.||||.+.... ..+.+.+|+++++++ +||||+++++++...+..++||||+ +|+
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (330)
T 2izr_A 14 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPS 90 (330)
T ss_dssp EEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCC
Confidence 46799999999999985 578899999987532 234688999999999 9999999999999999999999999 999
Q ss_pred HHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCc-----eEEeecCCccccCc
Q 044996 452 LAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLE-----PVLADYGLIPVMNQ 526 (678)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~-----~kl~DfGla~~~~~ 526 (678)
|.+++..... .+++.+++.|+.||+.||+|||+. +|+||||||+|||++.++. +||+|||+++.+..
T Consensus 91 L~~~~~~~~~----~~~~~~~~~i~~qi~~~l~~LH~~----~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~ 162 (330)
T 2izr_A 91 LEDLFDLCDR----TFSLKTVLMIAIQLISRMEYVHSK----NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYID 162 (330)
T ss_dssp HHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBC
T ss_pred HHHHHHHcCC----CCCHHHHHHHHHHHHHHHHHHHhC----CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeec
Confidence 9999986422 599999999999999999999976 8999999999999999887 99999999986543
Q ss_pred c-----------ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCC
Q 044996 527 E-----------SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595 (678)
Q Consensus 527 ~-----------~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 595 (678)
. ....+|..|+|||++.+..++.++|||||||++|||++|+.||.... ...+.+..........
T Consensus 163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~-----~~~~~~~~~~i~~~~~ 237 (330)
T 2izr_A 163 PETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLK-----ADTLKERYQKIGDTKR 237 (330)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC-----CSSHHHHHHHHHHHHH
T ss_pred CCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccc-----cccHHHHHHHHHhhhc
Confidence 2 13346789999999999999999999999999999999999997321 1233333322221110
Q ss_pred ccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCC
Q 044996 596 NRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGD 652 (678)
Q Consensus 596 ~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~ 652 (678)
.. ....+ .. ... .+.+++..||+.||.+||++.+|++.|+++....+.
T Consensus 238 ~~---~~~~~-~~----~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~ 285 (330)
T 2izr_A 238 AT---PIEVL-CE----NFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGY 285 (330)
T ss_dssp HS---CHHHH-TT----TCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred cC---CHHHH-hc----cCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 00 00000 00 012 688888899999999999999999999998766543
No 83
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=5.9e-40 Score=345.12 Aligned_cols=240 Identities=19% Similarity=0.282 Sum_probs=190.8
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC-hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCc------------
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN-NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEE------------ 439 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~------------ 439 (678)
.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++|||||+++++|.+...
T Consensus 11 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~ 90 (332)
T 3qd2_B 11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWL 90 (332)
T ss_dssp EEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC---
T ss_pred eeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhh
Confidence 467999999999999875 78999999997533 3456789999999999999999999999866432
Q ss_pred ---------------------------------------------eEEEEeccCCCCHHHHhhccCCCCCCCCChHHHHH
Q 044996 440 ---------------------------------------------KLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLK 474 (678)
Q Consensus 440 ---------------------------------------------~~lv~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~ 474 (678)
.++||||+++|+|.+++...... ....+..++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~ 168 (332)
T 3qd2_B 91 KDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL--EDREHGVCLH 168 (332)
T ss_dssp -----------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSG--GGSCHHHHHH
T ss_pred ccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCc--cchhhHHHHH
Confidence 79999999999999999865432 2467778999
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc----------------cccccceeeC
Q 044996 475 IVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES----------------AQELMIAYKS 538 (678)
Q Consensus 475 i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~----------------~~~~~~~y~a 538 (678)
++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...++..|+|
T Consensus 169 i~~qi~~aL~~LH~~----~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 244 (332)
T 3qd2_B 169 IFIQIAEAVEFLHSK----GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS 244 (332)
T ss_dssp HHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred HHHHHHHHHHHHHhC----CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence 999999999999976 89999999999999999999999999998765431 2246788999
Q ss_pred ccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhcccCCHHHHHHH
Q 044996 539 PEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMADERNSEGEMVKL 618 (678)
Q Consensus 539 PE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 618 (678)
||++.+..++.++|||||||++|||++|..|+... ........ ... . +.. .......+
T Consensus 245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~----------~~~~~~~~-~~~-~-----~~~-----~~~~~~~~ 302 (332)
T 3qd2_B 245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER----------VRIITDVR-NLK-F-----PLL-----FTQKYPQE 302 (332)
T ss_dssp HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH----------HHHHHHHH-TTC-C-----CHH-----HHHHCHHH
T ss_pred hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH----------HHHHHHhh-ccC-C-----Ccc-----cccCChhH
Confidence 99999889999999999999999999998876411 11111111 110 0 000 01223456
Q ss_pred HHHHhhcCccccccCCCHHHHHH
Q 044996 619 LKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 619 ~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.+++.+||+.||.+|||+.|+++
T Consensus 303 ~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 303 HMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHHHHccCCCCcCCCHHHHhh
Confidence 78888999999999999999986
No 84
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=4.8e-40 Score=348.80 Aligned_cols=238 Identities=22% Similarity=0.246 Sum_probs=193.9
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEeccc---ChhhHHHHHHHHHHHhcc-CCCCccceeEEEEeCCceEEEEeccC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQM---NNVGREEFQEHMRRLGRL-RHPNLLPLVAYYYRKEEKLLVHEFVP 448 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~Ey~~ 448 (678)
.++||+|+||+||+|+.. +++.||||+++.. .....+.+.+|.+++..+ +||||+++++++.+.+..|+||||++
T Consensus 28 ~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 107 (353)
T 3txo_A 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVN 107 (353)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCC
Confidence 467999999999999864 6889999999753 233456788999999988 79999999999999999999999999
Q ss_pred CCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc-
Q 044996 449 KRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE- 527 (678)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~- 527 (678)
+|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 108 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~----givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~ 178 (353)
T 3txo_A 108 GGDLMFHIQKSR-----RFDEARARFYAAEIISALMFLHDK----GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG 178 (353)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CCcccCCCHHHEEECCCCCEEEccccceeecccCC
Confidence 999999997653 489999999999999999999976 8999999999999999999999999999864322
Q ss_pred ---ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchh
Q 044996 528 ---SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKE 604 (678)
Q Consensus 528 ---~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 604 (678)
....+|..|+|||++.+..++.++|||||||++|||++|+.||.. .+..+....+.......
T Consensus 179 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~--------~~~~~~~~~i~~~~~~~------- 243 (353)
T 3txo_A 179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA--------ENEDDLFEAILNDEVVY------- 243 (353)
T ss_dssp -------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHCCCCC-------
T ss_pred ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCC--------CCHHHHHHHHHcCCCCC-------
Confidence 223478899999999988899999999999999999999999962 23334444444332111
Q ss_pred hhcccCCHHHHHHHHHHHhhcCccccccCCCH------HHHHH
Q 044996 605 MADERNSEGEMVKLLKIGLACCEEEVEKRLDL------KEAVE 641 (678)
Q Consensus 605 l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~------~ev~~ 641 (678)
+......+.+++.+||+.||.+||++ .|+++
T Consensus 244 ------p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 244 ------PTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp ------CTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred ------CCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 11112346677889999999999998 66654
No 85
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=9.6e-41 Score=350.76 Aligned_cols=247 Identities=24% Similarity=0.387 Sum_probs=194.4
Q ss_pred ccccCccCceeEEEEEec-CCce----EEEEEecccC-hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEecc
Q 044996 374 AEILGSGCFGSSYKASLS-TGAM----MVVKRFKQMN-NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFV 447 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~ 447 (678)
.+.||+|+||.||+|... ++.. |++|.+.... ....+.+.+|+.++++++||||+++++++. .+..++||||+
T Consensus 18 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 96 (325)
T 3kex_A 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYL 96 (325)
T ss_dssp EEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECC
T ss_pred eeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeC
Confidence 467999999999999864 4443 7777775432 233456788999999999999999999986 56789999999
Q ss_pred CCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc
Q 044996 448 PKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE 527 (678)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 527 (678)
++|+|.+++..... .+++..++.|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.+...
T Consensus 97 ~~~~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 97 PLGSLLDHVRQHRG----ALGPQLLLNWGVQIAKGMYYLEEH----GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp TTCBSHHHHHSSGG----GSCTTHHHHHHHHHHHHHHHHHHT----TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred CCCCHHHHHHHccc----cCCHHHHHHHHHHHHHHHHHHHhC----CCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 99999999976532 589999999999999999999977 7999999999999999999999999999876443
Q ss_pred c------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCccccc
Q 044996 528 S------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRTEV 600 (678)
Q Consensus 528 ~------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 600 (678)
. ...++..|+|||++.+..++.++|||||||++|||+| |+.||... ...... ..+..+...
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~--------~~~~~~-~~~~~~~~~--- 236 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL--------RLAEVP-DLLEKGERL--- 236 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS--------CTTHHH-HHHHTTCBC---
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCcccc--------CHHHHH-HHHHcCCCC---
Confidence 2 2234568999999998999999999999999999999 99999721 111111 222222111
Q ss_pred cchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhcc
Q 044996 601 FDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKER 649 (678)
Q Consensus 601 ~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 649 (678)
..+. .....+.+++.+||+.||.+|||+.|+++.|+++...
T Consensus 237 ~~~~--------~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 237 AQPQ--------ICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp CCCT--------TBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred CCCC--------cCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0011 1122367788899999999999999999999998654
No 86
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=356.43 Aligned_cols=243 Identities=19% Similarity=0.215 Sum_probs=196.1
Q ss_pred hccccCccCceeEEEEEe-cCCceEEEEEecccC--hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 373 SAEILGSGCFGSSYKASL-STGAMMVVKRFKQMN--NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
..+.||+|+||.||+|.. .+++.+|+|++.... ....+.+.+|++++++++|||||++++++.+.+..++||||+++
T Consensus 15 i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~g 94 (444)
T 3soa_A 15 LFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTG 94 (444)
T ss_dssp EEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBC
T ss_pred EEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCC
Confidence 356799999999999975 578899999987533 34456789999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEec---CCCceEEeecCCccccCc
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN---ESLEPVLADYGLIPVMNQ 526 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~---~~~~~kl~DfGla~~~~~ 526 (678)
|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++ +++.+||+|||+++....
T Consensus 95 g~L~~~i~~~~-----~~~e~~~~~i~~qil~aL~~lH~~----givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~ 165 (444)
T 3soa_A 95 GELFEDIVARE-----YYSEADASHCIQQILEAVLHCHQM----GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165 (444)
T ss_dssp CBHHHHHHHCS-----CCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence 99999998653 589999999999999999999976 899999999999998 568899999999987654
Q ss_pred cc----cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccc
Q 044996 527 ES----AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFD 602 (678)
Q Consensus 527 ~~----~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d 602 (678)
.. ...++..|+|||++.+..++.++|||||||++|||++|+.||.. .+............... ..
T Consensus 166 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~--------~~~~~~~~~i~~~~~~~---~~ 234 (444)
T 3soa_A 166 EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD--------EDQHRLYQQIKAGAYDF---PS 234 (444)
T ss_dssp TCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCC--------SSHHHHHHHHHHTCCCC---CT
T ss_pred CCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCC--------ccHHHHHHHHHhCCCCC---Cc
Confidence 32 23578899999999988999999999999999999999999962 22233333333222111 11
Q ss_pred hhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 603 KEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 603 ~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
+.. ......+.+++.+||+.||.+|||+.|+++
T Consensus 235 ~~~------~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 235 PEW------DTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp TTT------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ccc------ccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 111 012234677888999999999999999987
No 87
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=5e-40 Score=352.98 Aligned_cols=242 Identities=20% Similarity=0.274 Sum_probs=189.5
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC---hhhHHHHHHHHHHHhcc-CCCCccceeEEEEeCCceEEEEeccC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN---NVGREEFQEHMRRLGRL-RHPNLLPLVAYYYRKEEKLLVHEFVP 448 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~Ey~~ 448 (678)
.++||+|+||+||+|+.. +++.+|+|+++... ....+.+.+|..++.++ +|||||++++++.+.+..++||||++
T Consensus 57 ~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~ 136 (396)
T 4dc2_A 57 LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 136 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCC
Confidence 568999999999999875 57889999997532 22334578899999887 89999999999999999999999999
Q ss_pred CCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCc--
Q 044996 449 KRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQ-- 526 (678)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~-- 526 (678)
+|+|..++.... .+++..+..++.||+.||+|||+. +|+||||||+||||+.++.+||+|||+++....
T Consensus 137 gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~----givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~ 207 (396)
T 4dc2_A 137 GGDLMFHMQRQR-----KLPEEHARFYSAEISLALNYLHER----GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 207 (396)
T ss_dssp TCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CEEeccCCHHHEEECCCCCEEEeecceeeecccCC
Confidence 999999998653 489999999999999999999976 899999999999999999999999999986322
Q ss_pred --cccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchh
Q 044996 527 --ESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKE 604 (678)
Q Consensus 527 --~~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 604 (678)
.....+|..|+|||++.+..++.++|||||||++|||++|+.||..............+++..........
T Consensus 208 ~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~------- 280 (396)
T 4dc2_A 208 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR------- 280 (396)
T ss_dssp CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCC-------
T ss_pred CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccC-------
Confidence 12335788999999999999999999999999999999999999632211111112222232222221110
Q ss_pred hhcccCCHHHHHHHHHHHhhcCccccccCCCH
Q 044996 605 MADERNSEGEMVKLLKIGLACCEEEVEKRLDL 636 (678)
Q Consensus 605 l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~ 636 (678)
.+......+.+++.+||+.||.+||++
T Consensus 281 -----~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 281 -----IPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp -----CCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred -----CCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 011122346778889999999999985
No 88
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=3.1e-40 Score=350.65 Aligned_cols=246 Identities=16% Similarity=0.240 Sum_probs=195.8
Q ss_pred hccccCccCceeEEEEEe-cCCceEEEEEecccC-----hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEec
Q 044996 373 SAEILGSGCFGSSYKASL-STGAMMVVKRFKQMN-----NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEF 446 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey 446 (678)
..+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 28 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 107 (351)
T 3c0i_A 28 LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEF 107 (351)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeC
Confidence 457899999999999976 468999999986421 22467899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCc---eEEeecCCccc
Q 044996 447 VPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLE---PVLADYGLIPV 523 (678)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~---~kl~DfGla~~ 523 (678)
+++|+|.+++...... ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++. +||+|||+++.
T Consensus 108 ~~g~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~----~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~ 182 (351)
T 3c0i_A 108 MDGADLCFEIVKRADA-GFVYSEAVASHYMRQILEALRYCHDN----NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ 182 (351)
T ss_dssp CSSCBHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECSSSTTCCEEECCCTTCEE
T ss_pred CCCCCHHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHHC----CceeccCChHHeEEecCCCCCcEEEecCcceeE
Confidence 9999999888654321 12589999999999999999999976 8999999999999986654 99999999987
Q ss_pred cCccc----cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCcccc
Q 044996 524 MNQES----AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTE 599 (678)
Q Consensus 524 ~~~~~----~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 599 (678)
..... ...++..|+|||++.+..++.++|||||||++|||++|+.||.. .-.............
T Consensus 183 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~---------~~~~~~~~i~~~~~~--- 250 (351)
T 3c0i_A 183 LGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG---------TKERLFEGIIKGKYK--- 250 (351)
T ss_dssp CCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCS---------SHHHHHHHHHHTCCC---
T ss_pred ecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCC---------cHHHHHHHHHcCCCC---
Confidence 65432 23478899999999988999999999999999999999999962 111222222222111
Q ss_pred ccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 600 VFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 600 ~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.++.... .....+.+++.+||+.||++|||+.|+++
T Consensus 251 -~~~~~~~-----~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 251 -MNPRQWS-----HISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp -CCHHHHT-----TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -CCccccc-----cCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1111111 11235677888999999999999999986
No 89
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=5.6e-40 Score=338.42 Aligned_cols=249 Identities=24% Similarity=0.376 Sum_probs=203.5
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCCH
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSL 452 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL 452 (678)
.+.||+|+||.||+|... ++..||+|.+... ....+.+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 96 (288)
T 3kfa_A 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 96 (288)
T ss_dssp EEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEH
T ss_pred EeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcH
Confidence 467999999999999875 4788999998754 34567899999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc----
Q 044996 453 AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES---- 528 (678)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~---- 528 (678)
.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 97 ~~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~----~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 169 (288)
T 3kfa_A 97 LDYLRECNR---QEVSAVVLLYMATQISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169 (288)
T ss_dssp HHHHHHCCT---TTSCHHHHHHHHHHHHHHHHHHHHH----TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEE
T ss_pred HHHHHhccc---CCccHhHHHHHHHHHHHHHHHHHHC----CccCCCCCcceEEEcCCCCEEEccCccceeccCCccccc
Confidence 999976432 2589999999999999999999987 79999999999999999999999999998765432
Q ss_pred -cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhh
Q 044996 529 -AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMA 606 (678)
Q Consensus 529 -~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~ 606 (678)
...++..|+|||++.+..++.++||||||+++|||++ |+.||... +............ .. .
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~--------~~~~~~~~~~~~~-~~------~-- 232 (288)
T 3kfa_A 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--------DLSQVYELLEKDY-RM------E-- 232 (288)
T ss_dssp TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--------CGGGHHHHHHTTC-CC------C--
T ss_pred cCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------CHHHHHHHHhccC-CC------C--
Confidence 1224567999999998899999999999999999999 99998621 1222222121111 10 0
Q ss_pred cccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccC
Q 044996 607 DERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERD 650 (678)
Q Consensus 607 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~ 650 (678)
........+.+++.+|++.||.+|||+.|+++.|+++....
T Consensus 233 ---~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 233 ---RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp ---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ---CCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 01112345778888999999999999999999999887654
No 90
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=3.4e-40 Score=346.88 Aligned_cols=262 Identities=21% Similarity=0.309 Sum_probs=201.8
Q ss_pred ccccCccCceeEEEEEe-----cCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEe--CCceEEEEec
Q 044996 374 AEILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR--KEEKLLVHEF 446 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~~~~lv~Ey 446 (678)
.+.||+|+||.||+|++ .++..||||++........+.+.+|++++++++||||+++++++.. ....++||||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 107 (327)
T 3lxl_A 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEY 107 (327)
T ss_dssp EEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEEC
T ss_pred hhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEee
Confidence 46799999999999984 4678999999987766777889999999999999999999999874 4568999999
Q ss_pred cCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCc
Q 044996 447 VPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQ 526 (678)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 526 (678)
+++|+|.+++..... .+++.+++.|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 108 ~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~al~~lH~~----~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 179 (327)
T 3lxl_A 108 LPSGCLRDFLQRHRA----RLDASRLLLYSSQICKGMEYLGSR----RCVHRDLAARNILVESEAHVKIADFGLAKLLPL 179 (327)
T ss_dssp CTTCBHHHHHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred cCCCCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHhC----CccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence 999999999986432 489999999999999999999976 899999999999999999999999999986643
Q ss_pred cc-------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccC------CCCCCChHHHHHHHHhc
Q 044996 527 ES-------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQG------KKADGDLASWVNSVLAN 593 (678)
Q Consensus 527 ~~-------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~------~~~~~~l~~~~~~~~~~ 593 (678)
.. ...++..|+|||++.+..++.++|||||||++|||++|+.||...... ..........+......
T Consensus 180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (327)
T 3lxl_A 180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEE 259 (327)
T ss_dssp TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHT
T ss_pred CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhc
Confidence 22 223566799999998888999999999999999999999998632110 00000111111111111
Q ss_pred CCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCCCc
Q 044996 594 GDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGDED 654 (678)
Q Consensus 594 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~~~ 654 (678)
+... .........+.+++.+||+.||.+|||+.|+++.|+++.......+
T Consensus 260 ~~~~-----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~ 309 (327)
T 3lxl_A 260 GQRL-----------PAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCE 309 (327)
T ss_dssp TCCC-----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--------
T ss_pred ccCC-----------CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCcc
Confidence 1110 0111233457888889999999999999999999999877665443
No 91
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=4.8e-40 Score=339.46 Aligned_cols=249 Identities=21% Similarity=0.394 Sum_probs=189.7
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEeccc--ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCC
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQM--NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRS 451 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gs 451 (678)
.+.||+|+||.||+|+... .+|+|+++.. .....+.|.+|++++++++||||+++++++ .....++||||+++++
T Consensus 29 ~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~ 105 (289)
T 3og7_A 29 GQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSS 105 (289)
T ss_dssp EEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEE
T ss_pred eeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCc
Confidence 4679999999999998643 5899988743 344567899999999999999999999965 4567899999999999
Q ss_pred HHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc----
Q 044996 452 LAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE---- 527 (678)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~---- 527 (678)
|.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 106 L~~~l~~~~~----~~~~~~~~~i~~qi~~~L~~lH~~----~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (289)
T 3og7_A 106 LYHHLHASET----KFEMKKLIDIARQTARGMDYLHAK----SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177 (289)
T ss_dssp HHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEEETTTEEEECCCC------------
T ss_pred HHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHHhC----CcccccCccceEEECCCCCEEEccceeccccccccccc
Confidence 9999975432 589999999999999999999976 7999999999999999999999999998765432
Q ss_pred --ccccccceeeCccccc---cCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccc
Q 044996 528 --SAQELMIAYKSPEFLQ---LGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFD 602 (678)
Q Consensus 528 --~~~~~~~~y~aPE~~~---~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d 602 (678)
....++..|+|||++. +..++.++|||||||++|||++|+.||... .-.+.+......+...
T Consensus 178 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~--------~~~~~~~~~~~~~~~~----- 244 (289)
T 3og7_A 178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI--------NNRDQIIEMVGRGSLS----- 244 (289)
T ss_dssp ------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSC--------CCHHHHHHHHHHTSCC-----
T ss_pred cccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCcccc--------chHHHHHHHhcccccC-----
Confidence 1224678899999986 567889999999999999999999999621 1122222222222111
Q ss_pred hhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhc
Q 044996 603 KEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKE 648 (678)
Q Consensus 603 ~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 648 (678)
+.+.. ........+.+++.+||+.||.+|||+.|+++.|+++..
T Consensus 245 ~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 245 PDLSK--VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp CCTTS--SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred cchhh--ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 11100 011223467888889999999999999999999999865
No 92
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=6.5e-40 Score=342.92 Aligned_cols=257 Identities=25% Similarity=0.345 Sum_probs=201.3
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEe----CCceEEEEeccC
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR----KEEKLLVHEFVP 448 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~~lv~Ey~~ 448 (678)
.+.||+|+||.||++.. .+++.||||++........+.+.+|++++++++||||+++++++.. ....++||||++
T Consensus 34 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~ 113 (317)
T 2buj_A 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFK 113 (317)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCT
T ss_pred EEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCC
Confidence 46799999999999986 5789999999877666677889999999999999999999999973 346899999999
Q ss_pred CCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc
Q 044996 449 KRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES 528 (678)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 528 (678)
+|+|.+++...... ...+++.+++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 114 ~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~----~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~ 188 (317)
T 2buj_A 114 RGTLWNEIERLKDK-GNFLTEDQILWLLLGICRGLEAIHAK----GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHV 188 (317)
T ss_dssp TCBHHHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTSCEEECCCSSCEESCEEE
T ss_pred CCcHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC----CcccCCCCHHHEEEcCCCCEEEEecCcchhccccc
Confidence 99999999764221 23699999999999999999999977 89999999999999999999999999987654321
Q ss_pred -------------cccccceeeCccccccCC---CCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHh
Q 044996 529 -------------AQELMIAYKSPEFLQLGR---ITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLA 592 (678)
Q Consensus 529 -------------~~~~~~~y~aPE~~~~~~---~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~ 592 (678)
...++..|+|||++.... ++.++|||||||++|||++|+.||...... ...+... ..
T Consensus 189 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~----~~ 261 (317)
T 2buj_A 189 EGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK---GDSVALA----VQ 261 (317)
T ss_dssp ESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT---TSCHHHH----HH
T ss_pred ccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc---cchhhHH----hh
Confidence 122478899999987543 689999999999999999999999732211 1111111 11
Q ss_pred cCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCCC
Q 044996 593 NGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGDE 653 (678)
Q Consensus 593 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~~ 653 (678)
..... .........+.+++.+||+.||.+|||+.|+++.|+.+....+.+
T Consensus 262 ~~~~~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~~ 311 (317)
T 2buj_A 262 NQLSI-----------PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQ 311 (317)
T ss_dssp CC--C-----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC-
T ss_pred ccCCC-----------CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCCC
Confidence 11000 000112345778888999999999999999999999998766554
No 93
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=8.7e-40 Score=341.23 Aligned_cols=253 Identities=23% Similarity=0.325 Sum_probs=193.4
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEecccC--hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCC
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMN--NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRS 451 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gs 451 (678)
.+.||+|+||+||+|+..+++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||++ |+
T Consensus 26 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~ 104 (311)
T 3niz_A 26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME-KD 104 (311)
T ss_dssp EEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCS-EE
T ss_pred hhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCC-CC
Confidence 46799999999999999889999999987532 2235678899999999999999999999999999999999997 58
Q ss_pred HHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc----
Q 044996 452 LAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE---- 527 (678)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~---- 527 (678)
|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 105 l~~~~~~~~~----~~~~~~~~~~~~qi~~~l~~LH~~----~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 176 (311)
T 3niz_A 105 LKKVLDENKT----GLQDSQIKIYLYQLLRGVAHCHQH----RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY 176 (311)
T ss_dssp HHHHHHTCTT----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC--
T ss_pred HHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCchHhEEECCCCCEEEccCcCceecCCCcccc
Confidence 8888875432 589999999999999999999976 8999999999999999999999999999876432
Q ss_pred ccccccceeeCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCcc--cc-----
Q 044996 528 SAQELMIAYKSPEFLQL-GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNR--TE----- 599 (678)
Q Consensus 528 ~~~~~~~~y~aPE~~~~-~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~----- 599 (678)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||.... .......+...+...... ..
T Consensus 177 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~~~ 251 (311)
T 3niz_A 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVT-----DDDQLPKIFSILGTPNPREWPQVQELP 251 (311)
T ss_dssp -CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----TTTHHHHHHHHHCCCCTTTSGGGTTSH
T ss_pred cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHHCCCChHHhhhhhccc
Confidence 22346788999999876 568999999999999999999999997321 122222222222111100 00
Q ss_pred --------ccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 600 --------VFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 600 --------~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.++...... .......++.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 252 LWKQRTFQVFEKKPWSS-IIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHHSCCCCCCCCCCHHH-HSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhhcccccccCCcHHH-hCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 000000000 00011245678888999999999999999986
No 94
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=4.4e-40 Score=341.67 Aligned_cols=254 Identities=20% Similarity=0.309 Sum_probs=197.6
Q ss_pred ccccCccCceeEEEEEe-----cCCceEEEEEecccC-hhhHHHHHHHHHHHhccCCCCccceeEEEEeC--CceEEEEe
Q 044996 374 AEILGSGCFGSSYKASL-----STGAMMVVKRFKQMN-NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRK--EEKLLVHE 445 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~lv~E 445 (678)
.+.||+|+||.||+|++ .+++.||+|+++... ....+.+.+|++++++++||||+++++++... ...++|||
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 105 (302)
T 4e5w_A 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIME 105 (302)
T ss_dssp EEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEE
T ss_pred hhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEE
Confidence 46799999999999983 468899999997532 34457899999999999999999999999876 66899999
Q ss_pred ccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccC
Q 044996 446 FVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMN 525 (678)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 525 (678)
|+++|+|.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 106 ~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 106 FLPSGSLKEYLPKNKN----KINLKQQLKYAVQICKGMDYLGSR----QYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp CCTTCBHHHHHHHHTT----TCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred eCCCCcHHHHHHhccc----cCCHHHHHHHHHHHHHHHHHhhcC----CcccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999965432 589999999999999999999976 89999999999999999999999999998765
Q ss_pred ccc-------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCcccccc-------CCCCCCChHHHHHHHH
Q 044996 526 QES-------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQ-------GKKADGDLASWVNSVL 591 (678)
Q Consensus 526 ~~~-------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~-------~~~~~~~l~~~~~~~~ 591 (678)
... ...++..|+|||++.+..++.++||||||+++|||+||+.|+..... .... ......+....
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 256 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHG-QMTVTRLVNTL 256 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCG-GGHHHHHHHHH
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCccc-ccCHHHHHHHH
Confidence 432 22356679999999988899999999999999999999999752110 0000 00011111111
Q ss_pred hcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhh
Q 044996 592 ANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVK 647 (678)
Q Consensus 592 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~ 647 (678)
..+... .........+.+++.+||+.||.+|||+.|+++.|+++.
T Consensus 257 ~~~~~~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 257 KEGKRL-----------PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HTTCCC-----------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hccCCC-----------CCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 111100 011122345778888999999999999999999999875
No 95
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.1e-40 Score=346.77 Aligned_cols=237 Identities=19% Similarity=0.245 Sum_probs=191.7
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccC---hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMN---NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.+.||+|+||.||+|.. .+++.||+|++.... ......+.+|+++++.++||||+++++++...+..++||||+ +
T Consensus 14 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~ 92 (336)
T 3h4j_B 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-G 92 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-C
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-C
Confidence 46799999999999986 578899999987431 222457899999999999999999999999999999999999 7
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc-
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES- 528 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~- 528 (678)
|+|.+++.... .+++.++..++.||+.||.|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 93 g~l~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~----givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~ 163 (336)
T 3h4j_B 93 GELFDYIVEKK-----RMTEDEGRRFFQQIICAIEYCHRH----KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF 163 (336)
T ss_dssp EEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHH----TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CeEecCCchhhEEEcCCCCEEEEEeccceeccCCcc
Confidence 89999987653 489999999999999999999987 79999999999999999999999999998765432
Q ss_pred --cccccceeeCccccccCCC-CCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhh
Q 044996 529 --AQELMIAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEM 605 (678)
Q Consensus 529 --~~~~~~~y~aPE~~~~~~~-t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l 605 (678)
...++..|+|||++.+..+ +.++|||||||++|||++|+.||...... . ....+.....
T Consensus 164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-----~-------------~~~~i~~~~~ 225 (336)
T 3h4j_B 164 LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP-----N-------------LFKKVNSCVY 225 (336)
T ss_dssp TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST-----T-------------CBCCCCSSCC
T ss_pred cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH-----H-------------HHHHHHcCCC
Confidence 3346789999999987776 78999999999999999999999732110 0 0000000000
Q ss_pred hcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 606 ADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
..+......+.+++.+||+.||.+|||+.|+++
T Consensus 226 ---~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 226 ---VMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp ---CCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred ---CCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 001112234677888999999999999999987
No 96
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.7e-39 Score=341.46 Aligned_cols=238 Identities=19% Similarity=0.257 Sum_probs=187.0
Q ss_pred ccccCccCceeEEEEEe----cCCceEEEEEecccC----hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEe
Q 044996 374 AEILGSGCFGSSYKASL----STGAMMVVKRFKQMN----NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHE 445 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 445 (678)
.+.||+|+||.||+|+. .+++.||+|+++... ......+.+|++++++++||||+++++++...+..|+|||
T Consensus 22 ~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 101 (327)
T 3a62_A 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILE 101 (327)
T ss_dssp EEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred EEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEe
Confidence 46799999999999986 478999999997542 2334568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccC
Q 044996 446 FVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMN 525 (678)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 525 (678)
|+++|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 102 ~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~al~~lH~~----~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 102 YLSGGELFMQLEREG-----IFMEDTACFYLAEISMALGHLHQK----GIIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp CCTTEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred CCCCCcHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHhC----CEEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 999999999997643 488999999999999999999976 89999999999999999999999999987643
Q ss_pred cc----ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCcccccc
Q 044996 526 QE----SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVF 601 (678)
Q Consensus 526 ~~----~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 601 (678)
.. ....++..|+|||++.+..++.++|||||||++|||++|+.||.. .+....+..........
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~--------~~~~~~~~~i~~~~~~~---- 240 (327)
T 3a62_A 173 HDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG--------ENRKKTIDKILKCKLNL---- 240 (327)
T ss_dssp ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC--------SSHHHHHHHHHHTCCCC----
T ss_pred cCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCC--------CCHHHHHHHHHhCCCCC----
Confidence 22 223467889999999988999999999999999999999999962 23333333333322111
Q ss_pred chhhhcccCCHHHHHHHHHHHhhcCccccccCC-----CHHHHHH
Q 044996 602 DKEMADERNSEGEMVKLLKIGLACCEEEVEKRL-----DLKEAVE 641 (678)
Q Consensus 602 d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-----s~~ev~~ 641 (678)
+......+.+++.+||+.||.+|| ++.|+++
T Consensus 241 ---------p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 241 ---------PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp ---------CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred ---------CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 011123467788899999999999 6777765
No 97
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.5e-40 Score=341.15 Aligned_cols=239 Identities=21% Similarity=0.243 Sum_probs=187.1
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccCh--------------------------hhHHHHHHHHHHHhccCCCC
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMNN--------------------------VGREEFQEHMRRLGRLRHPN 426 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------------------------~~~~~~~~e~~~l~~l~H~n 426 (678)
.+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|++++++++|||
T Consensus 18 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 97 (298)
T 2zv2_A 18 KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPN 97 (298)
T ss_dssp EEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTT
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCC
Confidence 46799999999999986 4688999999865321 11356889999999999999
Q ss_pred ccceeEEEEe--CCceEEEEeccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCC
Q 044996 427 LLPLVAYYYR--KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSN 504 (678)
Q Consensus 427 iv~l~~~~~~--~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~N 504 (678)
|+++++++.+ .+..++||||+++|+|.+++.. ..+++.++..++.||+.||+|||+. +|+||||||+|
T Consensus 98 iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~Dlkp~N 167 (298)
T 2zv2_A 98 VVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL------KPLSEDQARFYFQDLIKGIEYLHYQ----KIIHRDIKPSN 167 (298)
T ss_dssp BCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS------SCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGG
T ss_pred CCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHHC----CeeccCCCHHH
Confidence 9999999986 5678999999999999876532 2589999999999999999999977 89999999999
Q ss_pred EEecCCCceEEeecCCccccCcc----ccccccceeeCccccccCC---CCCcchHHHHHHHHHHHHhCCCCccccccCC
Q 044996 505 VLLNESLEPVLADYGLIPVMNQE----SAQELMIAYKSPEFLQLGR---ITKKTDVWSLGVLILEIMTGKFPANFLQQGK 577 (678)
Q Consensus 505 ILl~~~~~~kl~DfGla~~~~~~----~~~~~~~~y~aPE~~~~~~---~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~ 577 (678)
||++.++.+||+|||+++..... ....++..|+|||++.+.. ++.++|||||||++|||++|+.||..
T Consensus 168 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~----- 242 (298)
T 2zv2_A 168 LLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD----- 242 (298)
T ss_dssp EEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC-----
T ss_pred EEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC-----
Confidence 99999999999999999876543 2335688999999997655 37889999999999999999999962
Q ss_pred CCCCChHHHHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 578 KADGDLASWVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 578 ~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.....+........... +. . ......+.+++.+||+.||++|||+.|+++
T Consensus 243 ---~~~~~~~~~~~~~~~~~-----~~---~---~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 243 ---ERIMCLHSKIKSQALEF-----PD---Q---PDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp ---SSHHHHHHHHHHCCCCC-----CS---S---SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ---ccHHHHHHHHhcccCCC-----CC---c---cccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 23333333333221111 00 0 011234677888999999999999999875
No 98
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-39 Score=341.23 Aligned_cols=238 Identities=18% Similarity=0.220 Sum_probs=197.3
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC---hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN---NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|+.+++.++||||+++++++.+.+..++||||+++
T Consensus 11 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~g 90 (318)
T 1fot_A 11 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEG 90 (318)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCC
Confidence 467999999999999874 68899999987532 23456788999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc-c
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE-S 528 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~-~ 528 (678)
|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..... .
T Consensus 91 g~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~----~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~ 161 (318)
T 1fot_A 91 GELFSLLRKSQ-----RFPNPVAKFYAAEVCLALEYLHSK----DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY 161 (318)
T ss_dssp CBHHHHHHHTS-----SCCHHHHHHHHHHHHHHHHHHHTT----TEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CccccCCChheEEEcCCCCEEEeecCcceecCCccc
Confidence 99999998643 489999999999999999999965 8999999999999999999999999999876543 2
Q ss_pred cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhcc
Q 044996 529 AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMADE 608 (678)
Q Consensus 529 ~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~ 608 (678)
...+|..|+|||++.+..++.++|||||||++|||++|+.||.. .+........+......
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~--------~~~~~~~~~i~~~~~~~----------- 222 (318)
T 1fot_A 162 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD--------SNTMKTYEKILNAELRF----------- 222 (318)
T ss_dssp CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC--------SSHHHHHHHHHHCCCCC-----------
T ss_pred cccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCC--------CCHHHHHHHHHhCCCCC-----------
Confidence 34578899999999988999999999999999999999999962 23333444444332111
Q ss_pred cCCHHHHHHHHHHHhhcCccccccCC-----CHHHHHH
Q 044996 609 RNSEGEMVKLLKIGLACCEEEVEKRL-----DLKEAVE 641 (678)
Q Consensus 609 ~~~~~~~~~~~~l~~~Cl~~~P~~RP-----s~~ev~~ 641 (678)
+......+.+++.+|++.||.+|| ++.|+++
T Consensus 223 --p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 223 --PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp --CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred --CCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 011123466777899999999999 8888874
No 99
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=5e-40 Score=337.27 Aligned_cols=249 Identities=23% Similarity=0.381 Sum_probs=201.2
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCCHH
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLA 453 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL~ 453 (678)
.+.||+|+||.||+|...++..||+|.++... ...+.+.+|++++++++||||+++++++. .+..++||||+++++|.
T Consensus 18 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~ 95 (279)
T 1qpc_A 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLV 95 (279)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHH
T ss_pred eeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCHH
Confidence 46799999999999998888899999987543 34678999999999999999999999986 45689999999999999
Q ss_pred HHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc-----
Q 044996 454 VNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES----- 528 (678)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~----- 528 (678)
+++..... ..+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 96 ~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~----~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 168 (279)
T 1qpc_A 96 DFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEER----NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 168 (279)
T ss_dssp HHTTSHHH---HTCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT
T ss_pred HHHhcCCC---CCCCHHHHHHHHHHHHHHHHHHHHC----CeeccCCCHhhEEEcCCCCEEECCCcccccccCccccccc
Confidence 99975421 1489999999999999999999976 89999999999999999999999999998765432
Q ss_pred cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhc
Q 044996 529 AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMAD 607 (678)
Q Consensus 529 ~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~ 607 (678)
...++..|+|||++.+..++.++||||||+++|||++ |+.||.. ....+...... .+... ..
T Consensus 169 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~--------~~~~~~~~~~~-~~~~~---~~----- 231 (279)
T 1qpc_A 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG--------MTNPEVIQNLE-RGYRM---VR----- 231 (279)
T ss_dssp TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTT--------CCHHHHHHHHH-TTCCC---CC-----
T ss_pred CCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcc--------cCHHHHHHHHh-cccCC---CC-----
Confidence 1234567999999988889999999999999999999 9999862 22222222222 11111 00
Q ss_pred ccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCC
Q 044996 608 ERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDG 651 (678)
Q Consensus 608 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~ 651 (678)
.......+.+++.+|++.||++|||+.++++.|+++.....
T Consensus 232 ---~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 272 (279)
T 1qpc_A 232 ---PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272 (279)
T ss_dssp ---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred ---cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence 01123457788889999999999999999999999876543
No 100
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=3.6e-40 Score=375.62 Aligned_cols=244 Identities=22% Similarity=0.337 Sum_probs=197.3
Q ss_pred cccCccCceeEEEEEec---CCceEEEEEecccC--hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 375 EILGSGCFGSSYKASLS---TGAMMVVKRFKQMN--NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 375 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
+.||+|+||.||+|.+. .+..||||+++... ....++|.+|+++|++++|||||+++++|. .+..++|||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence 46999999999999653 45789999997532 344688999999999999999999999996 4568999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc-
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES- 528 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~- 528 (678)
|+|.++++... .+++.+++.|+.||+.||+|||+. +|+||||||+||||++++.+||+|||+++.+....
T Consensus 454 g~L~~~l~~~~-----~l~~~~~~~i~~qi~~~L~yLH~~----~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~ 524 (635)
T 4fl3_A 454 GPLNKYLQQNR-----HVKDKNIIELVHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524 (635)
T ss_dssp EEHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---
T ss_pred CCHHHHHhhCC-----CCCHHHHHHHHHHHHHHHHHHHHC----CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcc
Confidence 99999997543 589999999999999999999976 79999999999999999999999999998764332
Q ss_pred ------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCcccccc
Q 044996 529 ------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVF 601 (678)
Q Consensus 529 ------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 601 (678)
...++..|+|||++.+..++.++|||||||++|||+| |+.||.. ....+ +...+..+... .
T Consensus 525 ~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~--------~~~~~-~~~~i~~~~~~-~-- 592 (635)
T 4fl3_A 525 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG--------MKGSE-VTAMLEKGERM-G-- 592 (635)
T ss_dssp ----------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT--------CCHHH-HHHHHHTTCCC-C--
T ss_pred ccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--------CCHHH-HHHHHHcCCCC-C--
Confidence 1234577999999998899999999999999999999 9999962 12222 22222222111 0
Q ss_pred chhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhc
Q 044996 602 DKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKE 648 (678)
Q Consensus 602 d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 648 (678)
........+.+++.+||+.||++||++.+|++.|+++..
T Consensus 593 --------~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 593 --------CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp --------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred --------CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 011223457888889999999999999999999998754
No 101
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=9e-40 Score=335.84 Aligned_cols=247 Identities=25% Similarity=0.385 Sum_probs=196.2
Q ss_pred ccccCccCceeEEEEEecC----CceEEEEEeccc-ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccC
Q 044996 374 AEILGSGCFGSSYKASLST----GAMMVVKRFKQM-NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVP 448 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~ 448 (678)
.+.||+|+||.||+|.... +..||+|.+... .....+.|.+|++++++++||||+++++++.+ +..++||||++
T Consensus 17 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~ 95 (281)
T 3cc6_A 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYP 95 (281)
T ss_dssp EEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECCT
T ss_pred EEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecCC
Confidence 4679999999999997643 235899998754 34456789999999999999999999999864 56789999999
Q ss_pred CCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc
Q 044996 449 KRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES 528 (678)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 528 (678)
+++|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 96 ~~~L~~~l~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 167 (281)
T 3cc6_A 96 YGELGHYLERNKN----SLKVLTLVLYSLQICKAMAYLESI----NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED 167 (281)
T ss_dssp TCBHHHHHHHHTT----TCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCSGGGEEEEETTEEEECCCCGGGCC----
T ss_pred CCCHHHHHHhccc----cCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCccceEEECCCCcEEeCccCCCccccccc
Confidence 9999999976532 589999999999999999999976 89999999999999999999999999998765432
Q ss_pred -----cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCccccccc
Q 044996 529 -----AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFD 602 (678)
Q Consensus 529 -----~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d 602 (678)
...++..|+|||++.+..++.++||||||+++|||+| |+.||..... ..+ ... +..+... .
T Consensus 168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~-----~~~---~~~-~~~~~~~-~--- 234 (281)
T 3cc6_A 168 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN-----KDV---IGV-LEKGDRL-P--- 234 (281)
T ss_dssp -----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG-----GGH---HHH-HHHTCCC-C---
T ss_pred ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCCh-----HHH---HHH-HhcCCCC-C---
Confidence 2234678999999988899999999999999999998 9999962211 111 111 1111111 0
Q ss_pred hhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhcc
Q 044996 603 KEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKER 649 (678)
Q Consensus 603 ~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 649 (678)
........+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 235 -------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 235 -------KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp -------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -------CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 0011223477888899999999999999999999998654
No 102
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.1e-40 Score=343.56 Aligned_cols=247 Identities=21% Similarity=0.371 Sum_probs=192.7
Q ss_pred ccccCccCceeEEEEEec-CCce----EEEEEeccc-ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEecc
Q 044996 374 AEILGSGCFGSSYKASLS-TGAM----MVVKRFKQM-NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFV 447 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~ 447 (678)
.+.||+|+||.||+|... +++. |++|.+... .....+.+.+|+.++++++||||+++++++... ..++|+||+
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~~v~~~~ 98 (327)
T 3lzb_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLM 98 (327)
T ss_dssp EEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS-SEEEEECCC
T ss_pred EEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC-CceEEEEec
Confidence 467999999999999864 4443 477776543 344567899999999999999999999999865 488999999
Q ss_pred CCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc
Q 044996 448 PKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE 527 (678)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 527 (678)
++|+|.+++..... .+++..++.|+.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 99 ~~g~L~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~ 170 (327)
T 3lzb_A 99 PFGCLLDYVREHKD----NIGSQYLLNWCVQIAKGMNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp SSCBHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred CCCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHhhC----CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence 99999999986532 589999999999999999999976 8999999999999999999999999999876433
Q ss_pred c------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCccccc
Q 044996 528 S------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRTEV 600 (678)
Q Consensus 528 ~------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 600 (678)
. ...++..|+|||++.+..++.++|||||||++|||++ |+.||.... .... ...+..+... .
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~--------~~~~-~~~~~~~~~~-~- 239 (327)
T 3lzb_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--------ASEI-SSILEKGERL-P- 239 (327)
T ss_dssp ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--------GGGH-HHHHHTTCCC-C-
T ss_pred cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCC--------HHHH-HHHHHcCCCC-C-
Confidence 2 1234567999999999999999999999999999999 999997321 1111 1122222111 0
Q ss_pred cchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhcc
Q 044996 601 FDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKER 649 (678)
Q Consensus 601 ~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 649 (678)
........+.+++.+||+.||.+||++.|+++.|+++...
T Consensus 240 ---------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 240 ---------QPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ---------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred ---------CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 0111233577888899999999999999999999998754
No 103
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=345.61 Aligned_cols=241 Identities=20% Similarity=0.227 Sum_probs=181.0
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCCH
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSL 452 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL 452 (678)
.+.||+|+||.||+|+.. +++.||||+++.. ...+.+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 58 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 135 (349)
T 2w4o_A 58 ESELGRGATSIVYRCKQKGTQKPYALKVLKKT--VDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGEL 135 (349)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEeccc--hhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCH
Confidence 467999999999999875 5788999998754 2456788999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecC---CCceEEeecCCccccCccc-
Q 044996 453 AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNE---SLEPVLADYGLIPVMNQES- 528 (678)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~---~~~~kl~DfGla~~~~~~~- 528 (678)
.+++.... .+++.++..++.||+.||.|||+. +|+||||||+|||++. ++.+||+|||+++......
T Consensus 136 ~~~l~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~----~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 206 (349)
T 2w4o_A 136 FDRIVEKG-----YYSERDAADAVKQILEAVAYLHEN----GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL 206 (349)
T ss_dssp HHHHTTCS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEESSSSTTCCEEECCCC----------
T ss_pred HHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CeEecCCCcccEEEecCCCCCCEEEccCccccccCcccc
Confidence 99997542 589999999999999999999976 7999999999999975 8999999999998765432
Q ss_pred --cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhh
Q 044996 529 --AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMA 606 (678)
Q Consensus 529 --~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~ 606 (678)
...++..|+|||++.+..++.++|||||||++|||++|+.||... ..-............. ...+..
T Consensus 207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~-------~~~~~~~~~i~~~~~~---~~~~~~- 275 (349)
T 2w4o_A 207 MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDE-------RGDQFMFRRILNCEYY---FISPWW- 275 (349)
T ss_dssp ------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCT-------TCHHHHHHHHHTTCCC---CCTTTT-
T ss_pred cccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCC-------cccHHHHHHHHhCCCc---cCCchh-
Confidence 234678999999999889999999999999999999999999621 1111122222222111 111110
Q ss_pred cccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 607 DERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 607 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
......+.+++.+||+.||++|||+.|+++
T Consensus 276 -----~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 276 -----DEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp -----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -----hhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 112335678888999999999999999986
No 104
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.2e-39 Score=344.81 Aligned_cols=242 Identities=21% Similarity=0.281 Sum_probs=190.7
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEeccc---ChhhHHHHHHHHHHHhcc-CCCCccceeEEEEeCCceEEEEeccC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQM---NNVGREEFQEHMRRLGRL-RHPNLLPLVAYYYRKEEKLLVHEFVP 448 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~Ey~~ 448 (678)
.+.||+|+||.||+|+.. +++.||+|+++.. .....+.+.+|+.++.++ +||||+++++++.+.+..|+||||++
T Consensus 14 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~ 93 (345)
T 3a8x_A 14 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 93 (345)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCC
Confidence 467999999999999875 5889999999753 233456788999999988 89999999999999999999999999
Q ss_pred CCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc-
Q 044996 449 KRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE- 527 (678)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~- 527 (678)
+|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 94 gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~----~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 94 GGDLMFHMQRQR-----KLPEEHARFYSAEISLALNYLHER----GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 999999997643 489999999999999999999976 8999999999999999999999999999864221
Q ss_pred ---ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchh
Q 044996 528 ---SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKE 604 (678)
Q Consensus 528 ---~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 604 (678)
....+|..|+|||++.+..++.++|||||||++|||++|+.||................+..........
T Consensus 165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~------- 237 (345)
T 3a8x_A 165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR------- 237 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC-------
T ss_pred CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC-------
Confidence 2335788999999999889999999999999999999999999632111110111122222222221110
Q ss_pred hhcccCCHHHHHHHHHHHhhcCccccccCCCH
Q 044996 605 MADERNSEGEMVKLLKIGLACCEEEVEKRLDL 636 (678)
Q Consensus 605 l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~ 636 (678)
.+......+.+++.+||+.||.+||++
T Consensus 238 -----~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 238 -----IPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp -----CCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred -----CCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 011122346778889999999999995
No 105
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=9.4e-40 Score=340.97 Aligned_cols=253 Identities=18% Similarity=0.223 Sum_probs=194.5
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccC---hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCc----eEEEEe
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMN---NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEE----KLLVHE 445 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~----~~lv~E 445 (678)
.+.||+|+||.||+|+. .+++.||||+++... ......+.+|++++++++||||+++++++..... .|+|||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e 96 (311)
T 3ork_A 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 96 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEe
Confidence 46799999999999986 578899999997542 3345678999999999999999999999886554 399999
Q ss_pred ccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccC
Q 044996 446 FVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMN 525 (678)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 525 (678)
|+++|+|.++++... .+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 97 ~~~g~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 167 (311)
T 3ork_A 97 YVDGVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFSHQN----GIIHRDVKPANIMISATNAVKVMDFGIARAIA 167 (311)
T ss_dssp CCCEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred cCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CCCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence 999999999997653 589999999999999999999976 79999999999999999999999999997654
Q ss_pred ccc-------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccc
Q 044996 526 QES-------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRT 598 (678)
Q Consensus 526 ~~~-------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 598 (678)
... ...++..|+|||++.+..++.++|||||||++|||+||+.||.. .................
T Consensus 168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~--------~~~~~~~~~~~~~~~~~- 238 (311)
T 3ork_A 168 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG--------DSPVSVAYQHVREDPIP- 238 (311)
T ss_dssp --------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCC--------SSHHHHHHHHHHCCCCC-
T ss_pred ccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC--------CChHHHHHHHhcCCCCC-
Confidence 321 22367889999999988999999999999999999999999962 23333333333332111
Q ss_pred cccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHH-HHHHHHHhhccCCC
Q 044996 599 EVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKE-AVEKIEEVKERDGD 652 (678)
Q Consensus 599 ~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~e-v~~~L~~i~~~~~~ 652 (678)
+..... .....+.+++.+||+.||.+||++.+ +...+.++....+.
T Consensus 239 ----~~~~~~----~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~~ 285 (311)
T 3ork_A 239 ----PSARHE----GLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPP 285 (311)
T ss_dssp ----HHHHST----TCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTCCC
T ss_pred ----cccccC----CCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCCCC
Confidence 111111 12235777888999999999995554 55567776554433
No 106
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=8.6e-40 Score=345.60 Aligned_cols=237 Identities=22% Similarity=0.284 Sum_probs=193.9
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC---hhhHHHHHHHHHHHhcc-CCCCccceeEEEEeCCceEEEEeccC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN---NVGREEFQEHMRRLGRL-RHPNLLPLVAYYYRKEEKLLVHEFVP 448 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~Ey~~ 448 (678)
.++||+|+||.||+|+.. +++.||+|+++... ....+.+..|.+++..+ +||||+++++++.+.+..|+||||++
T Consensus 22 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 101 (345)
T 1xjd_A 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLN 101 (345)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCC
Confidence 467999999999999875 68899999997532 23456788899999877 99999999999999999999999999
Q ss_pred CCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc-
Q 044996 449 KRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE- 527 (678)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~- 527 (678)
+|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 102 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~----~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 172 (345)
T 1xjd_A 102 GGDLMYHIQSCH-----KFDLSRATFYAAEIILGLQFLHSK----GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD 172 (345)
T ss_dssp TCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CeEeCCCChhhEEECCCCCEEEeEChhhhhcccCC
Confidence 999999998643 489999999999999999999976 8999999999999999999999999999864321
Q ss_pred ---ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchh
Q 044996 528 ---SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKE 604 (678)
Q Consensus 528 ---~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 604 (678)
....+|..|+|||++.+..++.++|||||||++|||++|+.||.. .+...............
T Consensus 173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~--------~~~~~~~~~i~~~~~~~------- 237 (345)
T 1xjd_A 173 AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG--------QDEEELFHSIRMDNPFY------- 237 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHCCCCC-------
T ss_pred CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCC--------CCHHHHHHHHHhCCCCC-------
Confidence 233568899999999988999999999999999999999999962 23333333333322111
Q ss_pred hhcccCCHHHHHHHHHHHhhcCccccccCCCHH-HHH
Q 044996 605 MADERNSEGEMVKLLKIGLACCEEEVEKRLDLK-EAV 640 (678)
Q Consensus 605 l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~-ev~ 640 (678)
+......+.+++.+||+.||.+||++. |+.
T Consensus 238 ------p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 238 ------PRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp ------CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred ------CcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 011123467778899999999999997 664
No 107
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4e-39 Score=335.88 Aligned_cols=251 Identities=19% Similarity=0.265 Sum_probs=193.9
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC---hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN---NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 39 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 118 (309)
T 2h34_A 39 RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLING 118 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCC
T ss_pred EEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCC
Confidence 467999999999999864 68899999987542 23357799999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc-
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES- 528 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~- 528 (678)
++|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 119 ~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~----~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 189 (309)
T 2h34_A 119 VDLAAMLRRQG-----PLAPPRAVAIVRQIGSALDAAHAA----GATHRDVKPENILVSADDFAYLVDFGIASATTDEKL 189 (309)
T ss_dssp EEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTTSCEEECSCCC---------
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----cCCcCCCChHHEEEcCCCCEEEecCccCcccccccc
Confidence 99999998643 589999999999999999999976 79999999999999999999999999987664432
Q ss_pred ----cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchh
Q 044996 529 ----AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKE 604 (678)
Q Consensus 529 ----~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 604 (678)
...++..|+|||++.+..++.++||||||+++|||++|+.||.. .. ...+...+...........
T Consensus 190 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~--------~~-~~~~~~~~~~~~~~~~~~~-- 258 (309)
T 2h34_A 190 TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQG--------DQ-LSVMGAHINQAIPRPSTVR-- 258 (309)
T ss_dssp -------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCS--------CH-HHHHHHHHHSCCCCGGGTS--
T ss_pred ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCC--------ch-HHHHHHHhccCCCCccccC--
Confidence 23467889999999988999999999999999999999999962 11 1223333322211101111
Q ss_pred hhcccCCHHHHHHHHHHHhhcCccccccCC-CHHHHHHHHHHhhccCC
Q 044996 605 MADERNSEGEMVKLLKIGLACCEEEVEKRL-DLKEAVEKIEEVKERDG 651 (678)
Q Consensus 605 l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-s~~ev~~~L~~i~~~~~ 651 (678)
. .....+.+++.+||+.||++|| +++++++.|+++.....
T Consensus 259 ---~----~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 259 ---P----GIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp ---T----TCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred ---C----CCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 1 1123477788899999999999 99999999998866543
No 108
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=9.2e-40 Score=342.58 Aligned_cols=252 Identities=20% Similarity=0.305 Sum_probs=202.3
Q ss_pred ccccCccCceeEEEEEec------CCceEEEEEecccC-hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEec
Q 044996 374 AEILGSGCFGSSYKASLS------TGAMMVVKRFKQMN-NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEF 446 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey 446 (678)
.+.||+|+||.||+|... .+..||+|.+.... ......|.+|++++++++||||+++++++.+.+..++||||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 109 (322)
T 1p4o_A 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 109 (322)
T ss_dssp EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEEe
Confidence 567999999999999754 36789999987543 34456799999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhccCC-----CCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCc
Q 044996 447 VPKRSLAVNLHGHQA-----LGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI 521 (678)
Q Consensus 447 ~~~gsL~~~l~~~~~-----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla 521 (678)
+++|+|.+++..... .....+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 110 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~----~i~H~dikp~NIli~~~~~~kl~Dfg~~ 185 (322)
T 1p4o_A 110 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMT 185 (322)
T ss_dssp CTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT----TCBCSCCSGGGEEECTTCCEEECCTTCC
T ss_pred CCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC----CCccCCCccceEEEcCCCeEEECcCccc
Confidence 999999999975321 1113579999999999999999999977 8999999999999999999999999999
Q ss_pred cccCccc------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcC
Q 044996 522 PVMNQES------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANG 594 (678)
Q Consensus 522 ~~~~~~~------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~ 594 (678)
+...... ...++..|+|||++.+..++.++|||||||++|||+| |+.||.. ....+.........
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~--------~~~~~~~~~~~~~~ 257 (322)
T 1p4o_A 186 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG--------LSNEQVLRFVMEGG 257 (322)
T ss_dssp CGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTT--------SCHHHHHHHHHTTC
T ss_pred cccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCcccc--------CCHHHHHHHHHcCC
Confidence 7654332 2234677999999998899999999999999999999 8999862 22233333322221
Q ss_pred CccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhcc
Q 044996 595 DNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKER 649 (678)
Q Consensus 595 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 649 (678)
.. .. .......+.+++.+||+.||.+|||+.|+++.|+++...
T Consensus 258 -~~-~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 258 -LL-DK----------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp -CC-CC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred -cC-CC----------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 11 00 111234577888899999999999999999999987653
No 109
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=352.72 Aligned_cols=262 Identities=19% Similarity=0.181 Sum_probs=194.5
Q ss_pred ccccCccCceeEEEEEec----CCceEEEEEecccChh-----------hHHHHHHHHHHHhccCCCCccceeEEEEe--
Q 044996 374 AEILGSGCFGSSYKASLS----TGAMMVVKRFKQMNNV-----------GREEFQEHMRRLGRLRHPNLLPLVAYYYR-- 436 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~H~niv~l~~~~~~-- 436 (678)
.+.||+|+||.||+|... .+..+|+|++...... ....+.+|+..+..++||||+++++++..
T Consensus 42 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~ 121 (345)
T 2v62_A 42 GKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEF 121 (345)
T ss_dssp EEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEES
T ss_pred EeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccccccc
Confidence 467999999999999875 5778999998754321 12346788899999999999999999988
Q ss_pred --CCceEEEEeccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCC--c
Q 044996 437 --KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESL--E 512 (678)
Q Consensus 437 --~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~--~ 512 (678)
....++||||+ +++|.+++.... .+++.+++.|+.||+.||+|||+. +|+||||||+|||++.++ .
T Consensus 122 ~~~~~~~lv~e~~-~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 122 KGRSYRFMVMERL-GIDLQKISGQNG-----TFKKSTVLQLGIRMLDVLEYIHEN----EYVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp SSCEEEEEEEECE-EEEHHHHCBGGG-----BCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEEESSSTTS
T ss_pred CCCcEEEEEEecc-CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC----CeeCCCcCHHHEEEccCCCCc
Confidence 67899999999 999999997653 589999999999999999999976 899999999999999887 9
Q ss_pred eEEeecCCccccCcc-----------ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCC
Q 044996 513 PVLADYGLIPVMNQE-----------SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADG 581 (678)
Q Consensus 513 ~kl~DfGla~~~~~~-----------~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~ 581 (678)
+||+|||+++.+... ....++..|+|||++.+..++.++|||||||++|||+||+.||..... ..
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~----~~ 267 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLK----DP 267 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTT----CH
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccc----cc
Confidence 999999999766432 222467889999999988999999999999999999999999962110 00
Q ss_pred ChHHHHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCCCcc
Q 044996 582 DLASWVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGDEDF 655 (678)
Q Consensus 582 ~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~~~~ 655 (678)
............. +...+............+.+++.+||+.||++||++.+|++.|+++....+..++
T Consensus 268 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~d~ 335 (345)
T 2v62_A 268 VAVQTAKTNLLDE------LPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPLGPLDF 335 (345)
T ss_dssp HHHHHHHHHHHHT------TTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCCCCCCCC
T ss_pred HHHHHHHHhhccc------ccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCcccCCCc
Confidence 1111111111110 1111100000001234577888899999999999999999999987765554444
No 110
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.5e-39 Score=343.93 Aligned_cols=259 Identities=21% Similarity=0.290 Sum_probs=202.4
Q ss_pred hccccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhc--cCCCCccceeEEEEeCC----ceEEEEec
Q 044996 373 SAEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGR--LRHPNLLPLVAYYYRKE----EKLLVHEF 446 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~~~----~~~lv~Ey 446 (678)
..+.||+|+||.||+|+. +++.||||++... ..+.+.+|++++.. ++||||+++++++.... ..++||||
T Consensus 46 ~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~ 121 (342)
T 1b6c_B 46 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 121 (342)
T ss_dssp EEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECC
T ss_pred EEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEee
Confidence 357899999999999987 5889999998643 34677888888887 79999999999998776 78999999
Q ss_pred cCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhC----CCCCCcccCCCCCCEEecCCCceEEeecCCcc
Q 044996 447 VPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYREL----PSLIAPHGHIKSSNVLLNESLEPVLADYGLIP 522 (678)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~----~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 522 (678)
+++|+|.+++... .+++.+++.++.|++.||+|||... +..+|+||||||+|||++.++.+||+|||+++
T Consensus 122 ~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~ 195 (342)
T 1b6c_B 122 HEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 195 (342)
T ss_dssp CTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred cCCCcHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCce
Confidence 9999999999753 4899999999999999999999310 12379999999999999999999999999997
Q ss_pred ccCccc--------cccccceeeCccccccCC------CCCcchHHHHHHHHHHHHhC----------CCCccccccCCC
Q 044996 523 VMNQES--------AQELMIAYKSPEFLQLGR------ITKKTDVWSLGVLILEIMTG----------KFPANFLQQGKK 578 (678)
Q Consensus 523 ~~~~~~--------~~~~~~~y~aPE~~~~~~------~t~ksDvwS~Gvvl~el~tg----------~~P~~~~~~~~~ 578 (678)
...... ...++..|+|||++.+.. ++.++|||||||++|||+|| +.||.....
T Consensus 196 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~--- 272 (342)
T 1b6c_B 196 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP--- 272 (342)
T ss_dssp EEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSC---
T ss_pred eccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCc---
Confidence 654322 224678899999987652 34689999999999999999 778763221
Q ss_pred CCCChHHHHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccC
Q 044996 579 ADGDLASWVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERD 650 (678)
Q Consensus 579 ~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~ 650 (678)
.......+........ . .+.+.......+....+.+++.+||+.||++|||+.||++.|+++.+..
T Consensus 273 ~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 273 SDPSVEEMRKVVCEQK-L-----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp SSCCHHHHHHHHTTSC-C-----CCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred CcccHHHHHHHHHHHH-h-----CCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 1123344443333221 1 1111111122356778899999999999999999999999999997754
No 111
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=3.8e-40 Score=345.82 Aligned_cols=241 Identities=18% Similarity=0.248 Sum_probs=190.3
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccCh-hhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNN-VGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRS 451 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gs 451 (678)
.+.||+|+||.||+|... +++.||||++..... ...+.+.+|+.++++++||||+++++++.+.+..++||||+++|+
T Consensus 12 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~ 91 (323)
T 3tki_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91 (323)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEE
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCc
Confidence 467999999999999865 788999999865332 234678899999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc----
Q 044996 452 LAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE---- 527 (678)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~---- 527 (678)
|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.+...
T Consensus 92 L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~----givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 162 (323)
T 3tki_A 92 LFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGI----GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (323)
T ss_dssp GGGGSBTTT-----BCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred HHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence 999986542 489999999999999999999976 8999999999999999999999999999765422
Q ss_pred --ccccccceeeCccccccCCC-CCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchh
Q 044996 528 --SAQELMIAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKE 604 (678)
Q Consensus 528 --~~~~~~~~y~aPE~~~~~~~-t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 604 (678)
....++..|+|||++.+..+ +.++|||||||++|||++|+.||..... .... ........... .+
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~-~~~~~~~~~~~----~~- 230 (323)
T 3tki_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD------SCQE-YSDWKEKKTYL----NP- 230 (323)
T ss_dssp CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCT------TSHH-HHHHHTTCTTS----TT-
T ss_pred ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCch------HHHH-HHHHhcccccC----Cc-
Confidence 12346788999999987765 7899999999999999999999973211 1111 11111111110 00
Q ss_pred hhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 605 MADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 605 l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
. ......+.+++.+||+.||.+|||+.|+++
T Consensus 231 ~------~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 231 W------KKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp G------GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred c------ccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0 111234667888999999999999999976
No 112
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.5e-39 Score=337.43 Aligned_cols=256 Identities=20% Similarity=0.260 Sum_probs=196.0
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEeccc---ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQM---NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.+.||+|+||.||+|.. .++..||+|+++.. .....+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 37 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 116 (310)
T 2wqm_A 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADA 116 (310)
T ss_dssp EEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCS
T ss_pred EEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCC
Confidence 46799999999999986 57889999998752 344567899999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc-
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES- 528 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~- 528 (678)
|+|.+++...... ...+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||+++......
T Consensus 117 ~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~----~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 191 (310)
T 2wqm_A 117 GDLSRMIKHFKKQ-KRLIPERTVWKYFVQLCSALEHMHSR----RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 191 (310)
T ss_dssp CBHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTSCEEECCC-----------
T ss_pred CCHHHHHHHhccc-ccCCCHHHHHHHHHHHHHHHHHHhhC----CeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc
Confidence 9999998753221 22589999999999999999999976 89999999999999999999999999987664432
Q ss_pred ---cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhh
Q 044996 529 ---AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEM 605 (678)
Q Consensus 529 ---~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l 605 (678)
...++..|+|||++.+..++.++||||||+++|||++|+.||... ......+........ .. . +
T Consensus 192 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~------~~~~~~~~~~~~~~~-~~-~-----~ 258 (310)
T 2wqm_A 192 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD------KMNLYSLCKKIEQCD-YP-P-----L 258 (310)
T ss_dssp -------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---------CCHHHHHHHHHTTC-SC-C-----C
T ss_pred cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCccc------chhHHHHHHHhhccc-CC-C-----C
Confidence 234678899999999889999999999999999999999998621 123333333332211 11 0 0
Q ss_pred hcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCC
Q 044996 606 ADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDG 651 (678)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~ 651 (678)
... .....+.+++.+||+.||.+|||+.||++.|+++.....
T Consensus 259 ~~~----~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 259 PSD----HYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp CTT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred ccc----ccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 001 122357778889999999999999999999999876543
No 113
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.4e-39 Score=340.79 Aligned_cols=257 Identities=22% Similarity=0.306 Sum_probs=200.9
Q ss_pred ccccCccCceeEEEEEe-----cCCceEEEEEecccC-hhhHHHHHHHHHHHhccCCCCccceeEEEEeC--CceEEEEe
Q 044996 374 AEILGSGCFGSSYKASL-----STGAMMVVKRFKQMN-NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRK--EEKLLVHE 445 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~lv~E 445 (678)
.+.||+|+||+||++.+ .+++.||||+++... ....+.+.+|++++++++||||+++++++.+. ...++|||
T Consensus 36 ~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 115 (318)
T 3lxp_A 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVME 115 (318)
T ss_dssp EEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEEC
T ss_pred hheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEe
Confidence 46799999999999865 267899999998643 34567899999999999999999999999874 56899999
Q ss_pred ccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccC
Q 044996 446 FVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMN 525 (678)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 525 (678)
|+++|+|.+++... .+++.+++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 116 ~~~~~~L~~~l~~~------~~~~~~~~~i~~~l~~~l~~LH~~----~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 116 YVPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLHAQ----HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp CCTTCBHHHHGGGS------CCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred cccCCcHHHHHhhC------CCCHHHHHHHHHHHHHHHHHHHhC----CccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 99999999999754 489999999999999999999976 79999999999999999999999999998765
Q ss_pred ccc-------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccC------CCCCCChHHHHHHHHh
Q 044996 526 QES-------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQG------KKADGDLASWVNSVLA 592 (678)
Q Consensus 526 ~~~-------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~------~~~~~~l~~~~~~~~~ 592 (678)
... ...++..|+|||++.+..++.++|||||||++|||+||+.||...... ......-...+...+.
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence 432 223456799999999888999999999999999999999998632100 0000000000111111
Q ss_pred cCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCC
Q 044996 593 NGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDG 651 (678)
Q Consensus 593 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~ 651 (678)
.+... .........+.+++.+||+.||.+|||+.|+++.|+++.+...
T Consensus 266 ~~~~~-----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 266 RGERL-----------PRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp TTCCC-----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred cccCC-----------CCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence 11100 0111233567888889999999999999999999999876543
No 114
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2e-39 Score=343.73 Aligned_cols=238 Identities=17% Similarity=0.191 Sum_probs=197.8
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC---hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN---NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..|+||||+++
T Consensus 46 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 125 (350)
T 1rdq_E 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCC
Confidence 467999999999999875 68899999987532 23456788999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc-c
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE-S 528 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~-~ 528 (678)
|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..... .
T Consensus 126 g~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~----~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~ 196 (350)
T 1rdq_E 126 GEMFSHLRRIG-----RFSEPHARFYAAQIVLTFEYLHSL----DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196 (350)
T ss_dssp CBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CcccccCccceEEECCCCCEEEcccccceeccCCcc
Confidence 99999998653 489999999999999999999976 8999999999999999999999999999876543 2
Q ss_pred cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhcc
Q 044996 529 AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMADE 608 (678)
Q Consensus 529 ~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~ 608 (678)
...+|..|+|||++.+..++.++|||||||++|||++|+.||.. .+..+............
T Consensus 197 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~--------~~~~~~~~~i~~~~~~~----------- 257 (350)
T 1rdq_E 197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA--------DQPIQIYEKIVSGKVRF----------- 257 (350)
T ss_dssp CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHCCCCC-----------
T ss_pred cccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCC--------CCHHHHHHHHHcCCCCC-----------
Confidence 34578899999999988999999999999999999999999962 23334444443322111
Q ss_pred cCCHHHHHHHHHHHhhcCccccccCCC-----HHHHHH
Q 044996 609 RNSEGEMVKLLKIGLACCEEEVEKRLD-----LKEAVE 641 (678)
Q Consensus 609 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs-----~~ev~~ 641 (678)
+......+.+++.+||+.||.+||+ +.||++
T Consensus 258 --p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 258 --PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp --CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred --CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 0111234677888999999999998 788765
No 115
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.1e-39 Score=336.56 Aligned_cols=251 Identities=20% Similarity=0.298 Sum_probs=191.6
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEecccC--hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCC
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMN--NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRS 451 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gs 451 (678)
.+.||+|+||+||+|+..+++.+|+|++.... ....+.+.+|++++++++||||+++++++...+..++||||+++ +
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 85 (288)
T 1ob3_A 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-D 85 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-E
T ss_pred hhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-C
Confidence 46799999999999998889999999987543 22346788999999999999999999999999999999999975 9
Q ss_pred HHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc----
Q 044996 452 LAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE---- 527 (678)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~---- 527 (678)
|.+++..... .+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 86 l~~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (288)
T 1ob3_A 86 LKKLLDVCEG----GLESVTAKSFLLQLLNGIAYCHDR----RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY 157 (288)
T ss_dssp HHHHHHTSTT----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred HHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHC----CeecCCCCHHHEEEcCCCCEEEeECccccccCcccccc
Confidence 9999876432 589999999999999999999976 8999999999999999999999999998765422
Q ss_pred ccccccceeeCccccccC-CCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHh---cCCc--cc---
Q 044996 528 SAQELMIAYKSPEFLQLG-RITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLA---NGDN--RT--- 598 (678)
Q Consensus 528 ~~~~~~~~y~aPE~~~~~-~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~---~~~~--~~--- 598 (678)
....++..|+|||++.+. .++.++|||||||++|||+||+.||... .-.+....... .... ..
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (288)
T 1ob3_A 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGV--------SEADQLMRIFRILGTPNSKNWPNVT 229 (288)
T ss_dssp ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS--------SHHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred ccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHHHHCCCChhhchhhh
Confidence 223467889999998754 5899999999999999999999999621 11111111111 1000 00
Q ss_pred --cccchhhhc------ccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 599 --EVFDKEMAD------ERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 599 --~~~d~~l~~------~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
..+++.+.. ..........+.+++.+||+.||++|||+.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp GSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 001111100 0000112345678888999999999999999975
No 116
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.2e-40 Score=343.78 Aligned_cols=257 Identities=23% Similarity=0.398 Sum_probs=202.2
Q ss_pred ccccCccCceeEEEEEe-----cCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCC--ceEEEEec
Q 044996 374 AEILGSGCFGSSYKASL-----STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKE--EKLLVHEF 446 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~~~lv~Ey 446 (678)
.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++...+ ..++||||
T Consensus 46 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 125 (326)
T 2w1i_A 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 125 (326)
T ss_dssp EEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECC
T ss_pred eeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEEC
Confidence 56799999999999984 468899999998766667788999999999999999999999987654 68999999
Q ss_pred cCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCc
Q 044996 447 VPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQ 526 (678)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 526 (678)
+++|+|.+++..... .+++.+++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 126 ~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~ 197 (326)
T 2w1i_A 126 LPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGTK----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 197 (326)
T ss_dssp CTTCBHHHHHHHSTT----SSCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred CCCCCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHhC----CEeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence 999999999986532 589999999999999999999976 899999999999999999999999999987654
Q ss_pred cc-------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCcccccc------CCCCC-CChHHHHHHHHh
Q 044996 527 ES-------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQ------GKKAD-GDLASWVNSVLA 592 (678)
Q Consensus 527 ~~-------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~------~~~~~-~~l~~~~~~~~~ 592 (678)
.. ...++..|+|||++.+..++.++|||||||++|||+||+.|+..... ..... ......+...+.
T Consensus 198 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (326)
T 2w1i_A 198 DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 277 (326)
T ss_dssp SCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred cccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhh
Confidence 32 12345679999999888899999999999999999999999862110 00000 000111111111
Q ss_pred cCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhcc
Q 044996 593 NGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKER 649 (678)
Q Consensus 593 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 649 (678)
.+... .........+.+++.+||+.||.+|||+.||++.|+++.+.
T Consensus 278 ~~~~~-----------~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 278 NNGRL-----------PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp TTCCC-----------CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCCC-----------CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 11110 01112334578888899999999999999999999998763
No 117
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=7.8e-40 Score=339.01 Aligned_cols=255 Identities=14% Similarity=0.125 Sum_probs=201.7
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccChhhHHHHHHHHHHHhcc-CCCCccceeEEEEeCCceEEEEeccCCCC
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRLGRL-RHPNLLPLVAYYYRKEEKLLVHEFVPKRS 451 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~Ey~~~gs 451 (678)
.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+++++++ +|+||+++++++......++||||+ +++
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 91 (298)
T 1csn_A 15 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPS 91 (298)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCC
Confidence 46799999999999985 578999999886532 334688899999999 7999999999999999999999999 999
Q ss_pred HHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCc-----eEEeecCCccccCc
Q 044996 452 LAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLE-----PVLADYGLIPVMNQ 526 (678)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~-----~kl~DfGla~~~~~ 526 (678)
|.+++..... .+++.++..|+.||+.||+|||+. +|+||||||+|||++.++. +||+|||+++....
T Consensus 92 L~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~----~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~ 163 (298)
T 1csn_A 92 LEDLLDLCGR----KFSVKTVAMAAKQMLARVQSIHEK----SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD 163 (298)
T ss_dssp HHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHTT----TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred HHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHhC----CEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccc
Confidence 9999986532 589999999999999999999965 8999999999999987776 99999999976643
Q ss_pred c-----------ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCC
Q 044996 527 E-----------SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGD 595 (678)
Q Consensus 527 ~-----------~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 595 (678)
. ....++..|+|||++.+..++.++|||||||++|||++|+.||..... ...............
T Consensus 164 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~~~~~~~~~~~~ 238 (298)
T 1csn_A 164 PVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA-----ATNKQKYERIGEKKQ 238 (298)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCS-----CCHHHHHHHHHHHHH
T ss_pred ccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhc-----cccHHHHHHHHhhcc
Confidence 2 122467889999999988999999999999999999999999973211 112222211111100
Q ss_pred ccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCC
Q 044996 596 NRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGD 652 (678)
Q Consensus 596 ~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~ 652 (678)
. ...+.+.. .....+.+++.+||+.||++||++++|++.|+++......
T Consensus 239 ~---~~~~~~~~-----~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~ 287 (298)
T 1csn_A 239 S---TPLRELCA-----GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNT 287 (298)
T ss_dssp H---SCHHHHTT-----TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred C---ccHHHHHh-----hCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCC
Confidence 0 00011100 1234577888899999999999999999999999876544
No 118
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=346.50 Aligned_cols=241 Identities=18% Similarity=0.277 Sum_probs=194.3
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC---hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN---NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++|||||++++++.+.+..|+||||+.+
T Consensus 20 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~g 99 (384)
T 4fr4_A 20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLG 99 (384)
T ss_dssp EEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCC
Confidence 467999999999999864 57889999986432 23456788999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc--
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE-- 527 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~-- 527 (678)
|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.+...
T Consensus 100 g~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~----givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 170 (384)
T 4fr4_A 100 GDLRYHLQQNV-----HFKEETVKLFICELVMALDYLQNQ----RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ 170 (384)
T ss_dssp EEHHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CceeccCcHHHeEECCCCCEEEeccceeeeccCCCc
Confidence 99999997642 589999999999999999999976 8999999999999999999999999999876543
Q ss_pred -ccccccceeeCcccccc---CCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccch
Q 044996 528 -SAQELMIAYKSPEFLQL---GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDK 603 (678)
Q Consensus 528 -~~~~~~~~y~aPE~~~~---~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~ 603 (678)
....+|..|+|||++.. ..++.++|||||||++|||++|+.||.... ..................
T Consensus 171 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~-----~~~~~~~~~~~~~~~~~~------ 239 (384)
T 4fr4_A 171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRS-----STSSKEIVHTFETTVVTY------ 239 (384)
T ss_dssp BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCT-----TSCHHHHHHHHHHCCCCC------
T ss_pred eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCC-----CccHHHHHHHHhhcccCC------
Confidence 23457889999999864 458999999999999999999999996221 122233332222221111
Q ss_pred hhhcccCCHHHHHHHHHHHhhcCccccccCCC-HHHHHH
Q 044996 604 EMADERNSEGEMVKLLKIGLACCEEEVEKRLD-LKEAVE 641 (678)
Q Consensus 604 ~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs-~~ev~~ 641 (678)
+......+.+++.+||+.||.+||+ +.+|.+
T Consensus 240 -------p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 240 -------PSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -------CTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -------CCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 1112245677888999999999998 666654
No 119
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=7.2e-40 Score=342.25 Aligned_cols=255 Identities=22% Similarity=0.322 Sum_probs=201.4
Q ss_pred hccccCccCceeEEEEEe------cCCceEEEEEecccC-hhhHHHHHHHHHHHhcc-CCCCccceeEEEEeCC-ceEEE
Q 044996 373 SAEILGSGCFGSSYKASL------STGAMMVVKRFKQMN-NVGREEFQEHMRRLGRL-RHPNLLPLVAYYYRKE-EKLLV 443 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~-~~~lv 443 (678)
..+.||+|+||.||+|.. .+++.||||.++... ....+.+.+|++++.++ +||||+++++++...+ ..++|
T Consensus 31 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv 110 (316)
T 2xir_A 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 110 (316)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred eeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEE
Confidence 356799999999999974 356789999997643 34456799999999999 7999999999998755 48999
Q ss_pred EeccCCCCHHHHhhccCCCC-----------CCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCc
Q 044996 444 HEFVPKRSLAVNLHGHQALG-----------QPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLE 512 (678)
Q Consensus 444 ~Ey~~~gsL~~~l~~~~~~~-----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~ 512 (678)
|||+++|+|.+++....... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~----~i~H~dikp~Nil~~~~~~ 186 (316)
T 2xir_A 111 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR----KCIHRDLAARNILLSEKNV 186 (316)
T ss_dssp EECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECGGGC
T ss_pred EEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC----CcccccCccceEEECCCCC
Confidence 99999999999998653210 11388999999999999999999976 7999999999999999999
Q ss_pred eEEeecCCccccCccc------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHH
Q 044996 513 PVLADYGLIPVMNQES------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLAS 585 (678)
Q Consensus 513 ~kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~ 585 (678)
+||+|||+++...... ...++..|+|||++.+..++.++|||||||++|||+| |+.||... ....
T Consensus 187 ~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~--------~~~~ 258 (316)
T 2xir_A 187 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV--------KIDE 258 (316)
T ss_dssp EEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--------CCSH
T ss_pred EEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc--------chhH
Confidence 9999999998664322 2234678999999998899999999999999999998 99998621 1112
Q ss_pred HHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccC
Q 044996 586 WVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERD 650 (678)
Q Consensus 586 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~ 650 (678)
.+...+..+... .. .......+.+++.+||+.||.+|||+.||++.|+++....
T Consensus 259 ~~~~~~~~~~~~-~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 259 EFCRRLKEGTRM-RA----------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp HHHHHHHHTCCC-CC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhccCccC-CC----------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 222222222111 00 0112235778888999999999999999999999987654
No 120
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.4e-39 Score=355.22 Aligned_cols=239 Identities=21% Similarity=0.249 Sum_probs=188.4
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEeccc---ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQM---NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.++||+|+||.||+|.. .+++.||||+++.. .......+.+|++++++++||||++++++|...+..++|||||++
T Consensus 153 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~ 232 (446)
T 4ejn_A 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 232 (446)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSS
T ss_pred eEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCC
Confidence 56899999999999976 46889999998753 233446678899999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc--
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE-- 527 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~-- 527 (678)
|+|.+++.... .+++..+..++.||+.||+|||+. .+|+||||||+||||+.++.+||+|||+++.....
T Consensus 233 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 304 (446)
T 4ejn_A 233 GELFFHLSRER-----VFSEDRARFYGAEIVSALDYLHSE---KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 304 (446)
T ss_dssp CBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC---
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHhhc---CCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCc
Confidence 99999997653 589999999999999999999972 27999999999999999999999999999864322
Q ss_pred --ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhh
Q 044996 528 --SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEM 605 (678)
Q Consensus 528 --~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l 605 (678)
....+|..|+|||++.+..++.++|||||||++|||++|+.||.. .+...............
T Consensus 305 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~--------~~~~~~~~~i~~~~~~~-------- 368 (446)
T 4ejn_A 305 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN--------QDHEKLFELILMEEIRF-------- 368 (446)
T ss_dssp --CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHCCCCC--------
T ss_pred ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCC--------CCHHHHHHHHHhCCCCC--------
Confidence 233478899999999999999999999999999999999999962 23333444333332111
Q ss_pred hcccCCHHHHHHHHHHHhhcCccccccCC-----CHHHHHH
Q 044996 606 ADERNSEGEMVKLLKIGLACCEEEVEKRL-----DLKEAVE 641 (678)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-----s~~ev~~ 641 (678)
+......+.+++.+||+.||.+|| ++.|+++
T Consensus 369 -----p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 369 -----PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp -----CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -----CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 011123467788899999999999 9999986
No 121
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=6.7e-40 Score=342.10 Aligned_cols=237 Identities=22% Similarity=0.252 Sum_probs=186.4
Q ss_pred hccccCccCceeEEEEEec-CCceEEEEEeccc--ChhhHHHHHHHHHHHhcc-CCCCccceeEEEEeCCceEEEEeccC
Q 044996 373 SAEILGSGCFGSSYKASLS-TGAMMVVKRFKQM--NNVGREEFQEHMRRLGRL-RHPNLLPLVAYYYRKEEKLLVHEFVP 448 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~Ey~~ 448 (678)
..++||+|+||+||+|... +++.||||++... .......+..|+..+.++ +||||++++++|.+.+..++||||+
T Consensus 61 ~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~- 139 (311)
T 3p1a_A 61 RLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC- 139 (311)
T ss_dssp EEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-
T ss_pred eeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-
Confidence 3567999999999999875 7899999988653 233344556666666555 8999999999999999999999999
Q ss_pred CCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc
Q 044996 449 KRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES 528 (678)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 528 (678)
+|+|.+++..... .++|..+..|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 140 ~~~L~~~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~ 211 (311)
T 3p1a_A 140 GPSLQQHCEAWGA----SLPEAQVWGYLRDTLLALAHLHSQ----GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG 211 (311)
T ss_dssp CCBHHHHHHHHCS----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred CCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHC----CEecCCCCHHHEEECCCCCEEEccceeeeecccCC
Confidence 7799999876532 599999999999999999999976 79999999999999999999999999987765432
Q ss_pred ---cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhh
Q 044996 529 ---AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEM 605 (678)
Q Consensus 529 ---~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l 605 (678)
...++..|+|||++.+ .++.++|||||||++|||++|+.|+... ..|. .+..+ ...+.+
T Consensus 212 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----------~~~~--~~~~~-----~~~~~~ 273 (311)
T 3p1a_A 212 AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----------EGWQ--QLRQG-----YLPPEF 273 (311)
T ss_dssp ---CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----------HHHH--HHTTT-----CCCHHH
T ss_pred CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----------cHHH--HHhcc-----CCCccc
Confidence 2346889999999875 7999999999999999999997665411 1111 11111 111122
Q ss_pred hcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 606 ADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.. .....+.+++.+||+.||++|||+.|+++
T Consensus 274 ~~-----~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 274 TA-----GLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HT-----TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cc-----CCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 11 11245778888999999999999999986
No 122
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=6.7e-40 Score=336.26 Aligned_cols=246 Identities=24% Similarity=0.389 Sum_probs=192.3
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeC-CceEEEEeccCCCCH
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRK-EEKLLVHEFVPKRSL 452 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-~~~~lv~Ey~~~gsL 452 (678)
.+.||+|+||.||+|.. ++..||+|.++.. ...+.+.+|++++++++||||+++++++... +..++||||+++|+|
T Consensus 26 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L 102 (278)
T 1byg_A 26 LQTIGKGEFGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 102 (278)
T ss_dssp EEEEEECSSCEEEEEEE-TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEH
T ss_pred EeEEecCCCceEEEEEE-cCCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCH
Confidence 56799999999999987 4889999998753 3457899999999999999999999997654 478999999999999
Q ss_pred HHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc-cccc
Q 044996 453 AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE-SAQE 531 (678)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~-~~~~ 531 (678)
.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ....
T Consensus 103 ~~~l~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 175 (278)
T 1byg_A 103 VDYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLEGN----NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 175 (278)
T ss_dssp HHHHHHHHH---HHCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred HHHHHhccc---ccCCHHHHHHHHHHHHHHHHHHHhC----CccccCCCcceEEEeCCCcEEEeeccccccccccccCCC
Confidence 999976431 1378999999999999999999976 7999999999999999999999999998765433 2234
Q ss_pred ccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhcccC
Q 044996 532 LMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMADERN 610 (678)
Q Consensus 532 ~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~ 610 (678)
++..|+|||++.+..++.++||||||+++|||+| |+.||... ...+...... .+... ..
T Consensus 176 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~--------~~~~~~~~~~-~~~~~------~~----- 235 (278)
T 1byg_A 176 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI--------PLKDVVPRVE-KGYKM------DA----- 235 (278)
T ss_dssp CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS--------CGGGHHHHHT-TTCCC------CC-----
T ss_pred ccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCC--------CHHHHHHHHh-cCCCC------CC-----
Confidence 5678999999998899999999999999999998 99998621 1122222211 11110 00
Q ss_pred CHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhcc
Q 044996 611 SEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKER 649 (678)
Q Consensus 611 ~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 649 (678)
.......+.+++.+||+.||.+|||+.|+++.|+++...
T Consensus 236 ~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 236 PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 111234577888899999999999999999999998764
No 123
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.7e-39 Score=330.13 Aligned_cols=237 Identities=19% Similarity=0.273 Sum_probs=175.3
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccC---hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMN---NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+ +
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~ 96 (275)
T 2eue_A 18 VKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-G 96 (275)
T ss_dssp CC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC-C
T ss_pred EEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhc-C
Confidence 45799999999999975 468899999987532 234567899999999999999999999999999999999999 7
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc-
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES- 528 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~- 528 (678)
++|.+++.... .+++.++..++.|++.||.|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 97 ~~l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~----~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 167 (275)
T 2eue_A 97 NELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCHRH----KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp EEHHHHHHTSS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CCeeccCChHhEEECCCCCEEEeecccceeccCccc
Confidence 78888887543 489999999999999999999977 79999999999999999999999999997665432
Q ss_pred --cccccceeeCccccccCCC-CCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhh
Q 044996 529 --AQELMIAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEM 605 (678)
Q Consensus 529 --~~~~~~~y~aPE~~~~~~~-t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l 605 (678)
...++..|+|||++.+..+ +.++|||||||++|||++|+.||.. .................
T Consensus 168 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~--------~~~~~~~~~~~~~~~~~-------- 231 (275)
T 2eue_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD--------ESIPVLFKNISNGVYTL-------- 231 (275)
T ss_dssp -------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHTCCCC--------
T ss_pred ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHHHhCCCCC--------
Confidence 2346788999999987765 7899999999999999999999962 23333333333222111
Q ss_pred hcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 606 ADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.......+.+++.+||+.||.+|||+.|+++
T Consensus 232 -----~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 232 -----PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -----CccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 0111234677888999999999999999976
No 124
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=4.8e-40 Score=346.48 Aligned_cols=253 Identities=22% Similarity=0.318 Sum_probs=201.0
Q ss_pred ccccCccCceeEEEEEecC-C-----ceEEEEEecccC-hhhHHHHHHHHHHHhcc-CCCCccceeEEEEeCCceEEEEe
Q 044996 374 AEILGSGCFGSSYKASLST-G-----AMMVVKRFKQMN-NVGREEFQEHMRRLGRL-RHPNLLPLVAYYYRKEEKLLVHE 445 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E 445 (678)
.+.||+|+||.||+|.... + ..||+|.++... ....+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus 51 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 130 (333)
T 2i1m_A 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130 (333)
T ss_dssp EEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEe
Confidence 5679999999999998642 2 479999987543 34567799999999999 89999999999999999999999
Q ss_pred ccCCCCHHHHhhccCCC---------CCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEe
Q 044996 446 FVPKRSLAVNLHGHQAL---------GQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLA 516 (678)
Q Consensus 446 y~~~gsL~~~l~~~~~~---------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~ 516 (678)
|+++|+|.+++...... ....+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+
T Consensus 131 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~Dlkp~NIl~~~~~~~kl~ 206 (333)
T 2i1m_A 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK----NCIHRDVAARNVLLTNGHVAKIG 206 (333)
T ss_dssp CCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGCEEEGGGEEEBC
T ss_pred cCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC----CcccCCcccceEEECCCCeEEEC
Confidence 99999999999754210 122589999999999999999999976 89999999999999999999999
Q ss_pred ecCCccccCccc------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHH
Q 044996 517 DYGLIPVMNQES------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNS 589 (678)
Q Consensus 517 DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~ 589 (678)
|||+++...... ...++..|+|||++.+..++.++|||||||++|||+| |+.||... .....+..
T Consensus 207 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~--------~~~~~~~~ 278 (333)
T 2i1m_A 207 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI--------LVNSKFYK 278 (333)
T ss_dssp CCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC--------CSSHHHHH
T ss_pred ccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCccc--------chhHHHHH
Confidence 999998654332 1234567999999988899999999999999999999 99998621 11122222
Q ss_pred HHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhcc
Q 044996 590 VLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKER 649 (678)
Q Consensus 590 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 649 (678)
....+... .. .......+.+++.+||+.||.+|||+.||++.|+++...
T Consensus 279 ~~~~~~~~---~~--------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 279 LVKDGYQM---AQ--------PAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp HHHHTCCC---CC--------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHhcCCCC---CC--------CCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 22222111 00 011124577888899999999999999999999987653
No 125
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2e-39 Score=339.45 Aligned_cols=255 Identities=19% Similarity=0.273 Sum_probs=185.3
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC-hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN-NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRS 451 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gs 451 (678)
.+.||+|+||.||+|... +++.||+|+++... ....+.+.+|++++++++||||+++++++...+..++||||++ |+
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~ 88 (317)
T 2pmi_A 10 LEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-ND 88 (317)
T ss_dssp ---------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-CB
T ss_pred eeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-CC
Confidence 467999999999999864 68899999987543 2334678899999999999999999999999999999999997 69
Q ss_pred HHHHhhccCCC-CCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc---
Q 044996 452 LAVNLHGHQAL-GQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE--- 527 (678)
Q Consensus 452 L~~~l~~~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~--- 527 (678)
|.+++...... ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 89 L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~----~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (317)
T 2pmi_A 89 LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN----KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT 164 (317)
T ss_dssp HHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCC
T ss_pred HHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC----CeeeCCCChHHeEEcCCCCEEECcCccceecCCCccc
Confidence 99998754321 123589999999999999999999976 8999999999999999999999999999865432
Q ss_pred -ccccccceeeCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHh---cCCc--ccc-
Q 044996 528 -SAQELMIAYKSPEFLQL-GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLA---NGDN--RTE- 599 (678)
Q Consensus 528 -~~~~~~~~y~aPE~~~~-~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~---~~~~--~~~- 599 (678)
....++..|+|||++.+ ..++.++|||||||++|||+||+.||... .-.+.+..... .... ...
T Consensus 165 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~--------~~~~~~~~i~~~~~~~~~~~~~~~ 236 (317)
T 2pmi_A 165 FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGT--------NDEEQLKLIFDIMGTPNESLWPSV 236 (317)
T ss_dssp CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS--------SHHHHHHHHHHHHCSCCTTTCGGG
T ss_pred CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--------ChHHHHHHHHHHhCCCChhHhhhh
Confidence 23346788999999876 46899999999999999999999999621 11111111111 1000 000
Q ss_pred ----ccchhhh-----------cccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 600 ----VFDKEMA-----------DERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 600 ----~~d~~l~-----------~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
...+.+. ...........+.+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 0000000 00000011235778888999999999999999875
No 126
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=8.2e-40 Score=343.56 Aligned_cols=246 Identities=17% Similarity=0.265 Sum_probs=178.5
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccChhhHHHHHHHHHHHhccC-CCCccceeEEEEeCCceEEEEeccCCCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLR-HPNLLPLVAYYYRKEEKLLVHEFVPKRS 451 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~Ey~~~gs 451 (678)
.+.||+|+||.||+|... +++.||||++.. .....+.+|+.+++++. ||||+++++++.+....++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISK---RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEG---GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEECh---hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 367999999999999874 688999999864 34567889999999997 9999999999999999999999999999
Q ss_pred HHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCC---ceEEeecCCccccCcc-
Q 044996 452 LAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESL---EPVLADYGLIPVMNQE- 527 (678)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~---~~kl~DfGla~~~~~~- 527 (678)
|.+++.... .+++.++..|+.||+.||+|||+. +|+||||||+|||++.++ .+||+|||+++.....
T Consensus 93 L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~----~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 163 (325)
T 3kn6_A 93 LFERIKKKK-----HFSETEASYIMRKLVSAVSHMHDV----GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN 163 (325)
T ss_dssp HHHHHHHCS-----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC--
T ss_pred HHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC
Confidence 999998653 589999999999999999999976 899999999999997665 8999999999865433
Q ss_pred ---ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchh
Q 044996 528 ---SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKE 604 (678)
Q Consensus 528 ---~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 604 (678)
....++..|+|||++.+..++.++|||||||++|||++|+.||........ .....+...... .+... ...+.
T Consensus 164 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~~~~~i~-~~~~~--~~~~~ 239 (325)
T 3kn6_A 164 QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT-CTSAVEIMKKIK-KGDFS--FEGEA 239 (325)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--------CCCHHHHHHHHT-TTCCC--CCSHH
T ss_pred CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc-cccHHHHHHHHH-cCCCC--CCccc
Confidence 223457889999999999999999999999999999999999973221110 112222222222 21110 00010
Q ss_pred hhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 605 MADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 605 l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
. ......+.+++.+||+.||.+|||+.|+++
T Consensus 240 ~------~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 240 W------KNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp H------HTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred c------cCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 0 011345677888999999999999999874
No 127
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.4e-39 Score=345.06 Aligned_cols=244 Identities=19% Similarity=0.226 Sum_probs=189.5
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCCH
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSL 452 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL 452 (678)
.+.||+|+||+||+++.. +++.||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||+++|+|
T Consensus 25 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L 103 (361)
T 3uc3_A 25 VKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGEL 103 (361)
T ss_dssp EEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred EEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCH
Confidence 467999999999999875 78899999987543 3346788999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCc--eEEeecCCccccCcc---
Q 044996 453 AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLE--PVLADYGLIPVMNQE--- 527 (678)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~--~kl~DfGla~~~~~~--- 527 (678)
.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++.....
T Consensus 104 ~~~l~~~~-----~~~~~~~~~i~~ql~~~L~~LH~~----~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~ 174 (361)
T 3uc3_A 104 YERICNAG-----RFSEDEARFFFQQLLSGVSYCHSM----QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 174 (361)
T ss_dssp HHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCCSCCCCGGGEEECSSSSCCEEECCCCCC---------
T ss_pred HHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCC
Confidence 99997643 489999999999999999999976 8999999999999987765 999999998754322
Q ss_pred ccccccceeeCccccccCCCCCc-chHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhh
Q 044996 528 SAQELMIAYKSPEFLQLGRITKK-TDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMA 606 (678)
Q Consensus 528 ~~~~~~~~y~aPE~~~~~~~t~k-sDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~ 606 (678)
....++..|+|||++.+..++.+ +|||||||++|||++|+.||.... ........+...........
T Consensus 175 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~----~~~~~~~~~~~~~~~~~~~~-------- 242 (361)
T 3uc3_A 175 KSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPE----EPRDYRKTIQRILSVKYSIP-------- 242 (361)
T ss_dssp ------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC--------CCCHHHHHHHHHTTCCCCC--------
T ss_pred CCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCc----cHHHHHHHHHHHhcCCCCCC--------
Confidence 23457889999999988877655 899999999999999999997321 12334444444433221110
Q ss_pred cccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHH
Q 044996 607 DERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEK 642 (678)
Q Consensus 607 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~ 642 (678)
.. ......+.+++.+||+.||.+|||+.|+++.
T Consensus 243 ~~---~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 243 DD---IRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp TT---SCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred Cc---CCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 00 0112346778889999999999999999873
No 128
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.8e-39 Score=335.46 Aligned_cols=244 Identities=21% Similarity=0.331 Sum_probs=196.1
Q ss_pred ccCccCceeEEEEEe---cCCceEEEEEecccC--hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCC
Q 044996 376 ILGSGCFGSSYKASL---STGAMMVVKRFKQMN--NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKR 450 (678)
Q Consensus 376 ~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~g 450 (678)
.||+|+||.||+|.+ ..+..||||+++... ....+++.+|++++++++||||+++++++ ..+..++||||++++
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 102 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELG 102 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCC
Confidence 799999999999964 246789999987542 23367899999999999999999999999 567789999999999
Q ss_pred CHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcccc-
Q 044996 451 SLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESA- 529 (678)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~- 529 (678)
+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 103 ~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~----~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 173 (291)
T 1xbb_A 103 PLNKYLQQNR-----HVKDKNIIELVHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 173 (291)
T ss_dssp EHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE
T ss_pred CHHHHHHhCc-----CCCHHHHHHHHHHHHHHHHHHHhC----CeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCc
Confidence 9999998643 489999999999999999999976 899999999999999999999999999976643321
Q ss_pred ------ccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCccccccc
Q 044996 530 ------QELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFD 602 (678)
Q Consensus 530 ------~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d 602 (678)
..++..|+|||++.+..++.++||||||+++|||+| |+.||.. ....+.. ..+..+... .
T Consensus 174 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~--------~~~~~~~-~~~~~~~~~-~--- 240 (291)
T 1xbb_A 174 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG--------MKGSEVT-AMLEKGERM-G--- 240 (291)
T ss_dssp EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTT--------CCHHHHH-HHHHTTCCC-C---
T ss_pred ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCC--------CCHHHHH-HHHHcCCCC-C---
Confidence 223577999999988889999999999999999999 9999972 1222222 222222111 0
Q ss_pred hhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhcc
Q 044996 603 KEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKER 649 (678)
Q Consensus 603 ~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 649 (678)
........+.+++.+||+.||.+||++.||++.|+++...
T Consensus 241 -------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 241 -------CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp -------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred -------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 0111234577888899999999999999999999988553
No 129
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4e-39 Score=341.54 Aligned_cols=238 Identities=21% Similarity=0.250 Sum_probs=194.7
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC---hhhHHHHHHHHHHHhcc-CCCCccceeEEEEeCCceEEEEeccC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN---NVGREEFQEHMRRLGRL-RHPNLLPLVAYYYRKEEKLLVHEFVP 448 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~Ey~~ 448 (678)
.++||+|+||.||+|+.. +++.||+|+++... ....+.+..|.+++..+ +||||+++++++.+.+..|+||||++
T Consensus 25 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 104 (353)
T 2i0e_A 25 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 104 (353)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCC
Confidence 467999999999999875 47889999987532 23456788999999988 89999999999999999999999999
Q ss_pred CCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCc--
Q 044996 449 KRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQ-- 526 (678)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~-- 526 (678)
+|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 105 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~----givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 175 (353)
T 2i0e_A 105 GGDLMYHIQQVG-----RFKEPHAVFYAAEIAIGLFFLQSK----GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 175 (353)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC
Confidence 999999998643 489999999999999999999976 899999999999999999999999999986432
Q ss_pred --cccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchh
Q 044996 527 --ESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKE 604 (678)
Q Consensus 527 --~~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 604 (678)
.....+|..|+|||++.+..++.++|||||||++|||++|+.||.. .+..+............
T Consensus 176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~--------~~~~~~~~~i~~~~~~~------- 240 (353)
T 2i0e_A 176 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG--------EDEDELFQSIMEHNVAY------- 240 (353)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHCCCCC-------
T ss_pred cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCC--------CCHHHHHHHHHhCCCCC-------
Confidence 1233578899999999989999999999999999999999999962 23334444444332111
Q ss_pred hhcccCCHHHHHHHHHHHhhcCccccccCCC-----HHHHHH
Q 044996 605 MADERNSEGEMVKLLKIGLACCEEEVEKRLD-----LKEAVE 641 (678)
Q Consensus 605 l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs-----~~ev~~ 641 (678)
+......+.+++.+||+.||.+||+ ++|+++
T Consensus 241 ------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 241 ------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp ------CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred ------CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 0111234677888999999999995 466654
No 130
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.1e-39 Score=336.52 Aligned_cols=252 Identities=22% Similarity=0.322 Sum_probs=191.5
Q ss_pred ccccCccCceeEEEEEec--CCc--eEEEEEeccc---ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEec
Q 044996 374 AEILGSGCFGSSYKASLS--TGA--MMVVKRFKQM---NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEF 446 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey 446 (678)
.+.||+|+||.||+|.+. ++. .||+|+++.. .....+.+.+|++++++++||||+++++++.... .++||||
T Consensus 23 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~ 101 (291)
T 1u46_A 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTEL 101 (291)
T ss_dssp EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEEC
T ss_pred eeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEec
Confidence 467999999999999853 233 5899988753 2345678999999999999999999999997654 8999999
Q ss_pred cCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCc
Q 044996 447 VPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQ 526 (678)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 526 (678)
+++|+|.+++..... .+++.++..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 102 ~~~~~L~~~l~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 102 APLGSLLDRLRKHQG----HFLLGTLSRYAVQVAEGMGYLESK----RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp CTTCBHHHHHHHHGG----GSCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred ccCCCHHHHHHhccC----CcCHHHHHHHHHHHHHHHHHHHhC----CcccCCCchheEEEcCCCCEEEccccccccccc
Confidence 999999999986532 589999999999999999999976 899999999999999999999999999977643
Q ss_pred cc-------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCccc
Q 044996 527 ES-------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRT 598 (678)
Q Consensus 527 ~~-------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 598 (678)
.. ...++..|+|||++.+..++.++||||||+++|||++ |+.||.. ....+.+..........
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~--------~~~~~~~~~~~~~~~~~- 244 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG--------LNGSQILHKIDKEGERL- 244 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTT--------CCHHHHHHHHHTSCCCC-
T ss_pred cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCccc--------CCHHHHHHHHHccCCCC-
Confidence 32 1234567999999988889999999999999999999 9999962 23333443333322111
Q ss_pred cccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCCC
Q 044996 599 EVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGDE 653 (678)
Q Consensus 599 ~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~~ 653 (678)
. ........+.+++.+||+.||.+|||+.++++.|+++...+...
T Consensus 245 ~----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 289 (291)
T 1u46_A 245 P----------RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMRA 289 (291)
T ss_dssp C----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC------
T ss_pred C----------CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccchhh
Confidence 0 01112345778888999999999999999999999987755443
No 131
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2.9e-39 Score=339.70 Aligned_cols=253 Identities=22% Similarity=0.341 Sum_probs=198.4
Q ss_pred hccccCccCceeEEEEEe------cCCceEEEEEeccc-ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEe
Q 044996 373 SAEILGSGCFGSSYKASL------STGAMMVVKRFKQM-NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHE 445 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 445 (678)
..+.||+|+||.||+|.. .++..||||.+... ......++.+|+.++++++||||+++++++...+..++|||
T Consensus 34 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 113 (327)
T 2yfx_A 34 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILME 113 (327)
T ss_dssp EEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEe
Confidence 356799999999999974 35678999999743 34556789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhccCCC--CCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecC---CCceEEeecCC
Q 044996 446 FVPKRSLAVNLHGHQAL--GQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNE---SLEPVLADYGL 520 (678)
Q Consensus 446 y~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~---~~~~kl~DfGl 520 (678)
|+++|+|.+++...... ....+++.+++.++.||+.||.|||+. +|+||||||+|||++. +..+||+|||+
T Consensus 114 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~----~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~ 189 (327)
T 2yfx_A 114 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN----HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 189 (327)
T ss_dssp CCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEESCSSTTCCEEECCCHH
T ss_pred cCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC----CeecCcCCHhHEEEecCCCcceEEECcccc
Confidence 99999999999865421 113589999999999999999999976 7999999999999994 45699999999
Q ss_pred ccccCcc------ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhc
Q 044996 521 IPVMNQE------SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLAN 593 (678)
Q Consensus 521 a~~~~~~------~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~ 593 (678)
++..... ....++..|+|||++.+..++.++|||||||++|||+| |+.||.. ....+........
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~--------~~~~~~~~~~~~~ 261 (327)
T 2yfx_A 190 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS--------KSNQEVLEFVTSG 261 (327)
T ss_dssp HHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT--------CCHHHHHHHHHTT
T ss_pred ccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCC--------cCHHHHHHHHhcC
Confidence 8654221 22345678999999988899999999999999999999 9999862 2222333222222
Q ss_pred CCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhcc
Q 044996 594 GDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKER 649 (678)
Q Consensus 594 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 649 (678)
. .. . ........+.+++.+||+.||.+||++.||++.|+.+...
T Consensus 262 ~-~~-~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 262 G-RM-D----------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp C-CC-C----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred C-CC-C----------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 1 11 0 0011223577888899999999999999999999988653
No 132
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.4e-39 Score=348.86 Aligned_cols=192 Identities=22% Similarity=0.282 Sum_probs=167.6
Q ss_pred ccccCcc--CceeEEEEEec-CCceEEEEEecccC--hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccC
Q 044996 374 AEILGSG--CFGSSYKASLS-TGAMMVVKRFKQMN--NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVP 448 (678)
Q Consensus 374 ~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~ 448 (678)
.++||+| +||.||+|+.. +++.||||+++... ....+.+.+|++++++++|||||++++++.+.+..++|||||+
T Consensus 30 ~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 109 (389)
T 3gni_B 30 LTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 109 (389)
T ss_dssp EEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred EecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccC
Confidence 4679999 99999999875 68999999997532 3445778899999999999999999999999999999999999
Q ss_pred CCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc-
Q 044996 449 KRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE- 527 (678)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~- 527 (678)
+|+|.+++..... ..+++..+..|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||.+......
T Consensus 110 ~~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~----~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~ 182 (389)
T 3gni_B 110 YGSAKDLICTHFM---DGMNELAIAYILQGVLKALDYIHHM----GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHG 182 (389)
T ss_dssp TCBHHHHHHHTCT---TCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTCCEEECCGGGCEECEETT
T ss_pred CCCHHHHHhhhcc---cCCCHHHHHHHHHHHHHHHHHHHhC----CeecCCCCHHHEEEcCCCCEEEcccccceeecccc
Confidence 9999999986532 2589999999999999999999976 8999999999999999999999999987543211
Q ss_pred ----------ccccccceeeCcccccc--CCCCCcchHHHHHHHHHHHHhCCCCccc
Q 044996 528 ----------SAQELMIAYKSPEFLQL--GRITKKTDVWSLGVLILEIMTGKFPANF 572 (678)
Q Consensus 528 ----------~~~~~~~~y~aPE~~~~--~~~t~ksDvwS~Gvvl~el~tg~~P~~~ 572 (678)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 239 (389)
T 3gni_B 183 QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 239 (389)
T ss_dssp EECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 11245678999999987 5789999999999999999999999963
No 133
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2e-39 Score=341.03 Aligned_cols=255 Identities=23% Similarity=0.359 Sum_probs=199.8
Q ss_pred ccccCccCceeEEEEEec-CCce--EEEEEeccc-ChhhHHHHHHHHHHHhcc-CCCCccceeEEEEeCCceEEEEeccC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAM--MVVKRFKQM-NNVGREEFQEHMRRLGRL-RHPNLLPLVAYYYRKEEKLLVHEFVP 448 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~--vavK~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~Ey~~ 448 (678)
.+.||+|+||.||+|+.. ++.. +++|.++.. .....+.+.+|+++++++ +||||+++++++.+.+..++||||++
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~ 109 (327)
T 1fvr_A 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 109 (327)
T ss_dssp EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred eeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCC
Confidence 567999999999999764 4554 488888753 234456789999999999 99999999999999999999999999
Q ss_pred CCCHHHHhhccCC-----------CCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEee
Q 044996 449 KRSLAVNLHGHQA-----------LGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLAD 517 (678)
Q Consensus 449 ~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~D 517 (678)
+|+|.+++..... .....+++.+++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 110 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~dlkp~NIl~~~~~~~kL~D 185 (327)
T 1fvr_A 110 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK----QFIHRDLAARNILVGENYVAKIAD 185 (327)
T ss_dssp TCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECGGGCEEECC
T ss_pred CCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC----CccCCCCccceEEEcCCCeEEEcc
Confidence 9999999976530 1123589999999999999999999976 899999999999999999999999
Q ss_pred cCCccccCcc---ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhc
Q 044996 518 YGLIPVMNQE---SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLAN 593 (678)
Q Consensus 518 fGla~~~~~~---~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~ 593 (678)
||+++..... ....++..|+|||++.+..++.++|||||||++|||+| |+.||.. ....+..... ..
T Consensus 186 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~--------~~~~~~~~~~-~~ 256 (327)
T 1fvr_A 186 FGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG--------MTCAELYEKL-PQ 256 (327)
T ss_dssp TTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT--------CCHHHHHHHG-GG
T ss_pred cCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCC--------CcHHHHHHHh-hc
Confidence 9998754432 22234678999999988889999999999999999998 9999962 2222322222 12
Q ss_pred CCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCC
Q 044996 594 GDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGD 652 (678)
Q Consensus 594 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~ 652 (678)
+... . ........+.+++.+||+.||.+|||+.|+++.|+++.+....
T Consensus 257 ~~~~------~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 304 (327)
T 1fvr_A 257 GYRL------E-----KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304 (327)
T ss_dssp TCCC------C-----CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSC
T ss_pred CCCC------C-----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcC
Confidence 1111 0 0111224577888899999999999999999999999876543
No 134
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=5.5e-40 Score=354.54 Aligned_cols=242 Identities=19% Similarity=0.248 Sum_probs=193.7
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC---hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN---NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.++||+|+||+||+|+.. +++.||+|+++... ....+.+.+|+.+++.++|||||+++++|.+.+..|+||||+++
T Consensus 74 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~g 153 (410)
T 3v8s_A 74 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPG 153 (410)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 467999999999999875 57899999986521 12234588999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc-
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES- 528 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~- 528 (678)
|+|.++++.. .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 154 g~L~~~l~~~------~~~e~~~~~~~~qi~~aL~~LH~~----givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~ 223 (410)
T 3v8s_A 154 GDLVNLMSNY------DVPEKWARFYTAEVVLALDAIHSM----GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 223 (410)
T ss_dssp EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSE
T ss_pred CcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC----CeEeccCCHHHeeECCCCCEEEeccceeEeeccCCc
Confidence 9999999753 488999999999999999999976 89999999999999999999999999998765432
Q ss_pred ----cccccceeeCccccccCC----CCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccc
Q 044996 529 ----AQELMIAYKSPEFLQLGR----ITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEV 600 (678)
Q Consensus 529 ----~~~~~~~y~aPE~~~~~~----~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 600 (678)
...+|..|+|||++.+.. ++.++|||||||++|||+||+.||. ..+.......++......
T Consensus 224 ~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~--------~~~~~~~~~~i~~~~~~~--- 292 (410)
T 3v8s_A 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY--------ADSLVGTYSKIMNHKNSL--- 292 (410)
T ss_dssp EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTC--------CSSHHHHHHHHHTHHHHC---
T ss_pred ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCC--------CCChhhHHHHHHhccccc---
Confidence 345789999999997655 7899999999999999999999996 223333333333211000
Q ss_pred cchhhhcccCCHHHHHHHHHHHhhcCcccccc--CCCHHHHHHH
Q 044996 601 FDKEMADERNSEGEMVKLLKIGLACCEEEVEK--RLDLKEAVEK 642 (678)
Q Consensus 601 ~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~--RPs~~ev~~~ 642 (678)
...... .....+.+++.+||..+|.+ ||++.||++.
T Consensus 293 ---~~p~~~---~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 293 ---TFPDDN---DISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp ---CCCTTC---CCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred ---cCCCcc---cccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 000000 11234667777999999988 9999999863
No 135
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.5e-39 Score=334.20 Aligned_cols=243 Identities=21% Similarity=0.333 Sum_probs=196.6
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEe----------------
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR---------------- 436 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~---------------- 436 (678)
.+.||+|+||.||+|... +++.||+|+++... +.+.+|++++++++||||+++++++..
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (284)
T 2a19_B 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSK 91 (284)
T ss_dssp EEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCE
T ss_pred eeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccC
Confidence 567999999999999875 78999999997543 356789999999999999999999864
Q ss_pred CCceEEEEeccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEe
Q 044996 437 KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLA 516 (678)
Q Consensus 437 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~ 516 (678)
....++||||+++|+|.+++..... ..+++..+..++.||+.||.|||+. +|+||||||+|||+++++.+||+
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~kl~ 164 (284)
T 2a19_B 92 TKCLFIQMEFCDKGTLEQWIEKRRG---EKLDKVLALELFEQITKGVDYIHSK----KLINRDLKPSNIFLVDTKQVKIG 164 (284)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEEEETTEEEEC
T ss_pred cceEEEEEeccCCCCHHHHHhhccC---CCCCHHHHHHHHHHHHHHHHHHHhC----CeeeccCCHHHEEEcCCCCEEEC
Confidence 3457999999999999999976432 2589999999999999999999976 89999999999999999999999
Q ss_pred ecCCccccCcc---ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhc
Q 044996 517 DYGLIPVMNQE---SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLAN 593 (678)
Q Consensus 517 DfGla~~~~~~---~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~ 593 (678)
|||+++..... ....++..|+|||++.+..++.++||||||+++|||++|+.|+... ..+.... ..
T Consensus 165 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----------~~~~~~~-~~ 233 (284)
T 2a19_B 165 DFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----------SKFFTDL-RD 233 (284)
T ss_dssp CCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----------HHHHHHH-HT
T ss_pred cchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----------HHHHHHh-hc
Confidence 99998776543 2234678899999999889999999999999999999999997521 1111111 11
Q ss_pred CCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCC
Q 044996 594 GDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGD 652 (678)
Q Consensus 594 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~ 652 (678)
+. . . ... ...+.+++.+||+.||.+|||+.|+++.|+.+....+.
T Consensus 234 ~~-~----~-----~~~----~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~ 278 (284)
T 2a19_B 234 GI-I----S-----DIF----DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK 278 (284)
T ss_dssp TC-C----C-----TTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred cc-c----c-----ccC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence 11 1 0 111 22366788899999999999999999999998776544
No 136
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=7.4e-39 Score=335.74 Aligned_cols=243 Identities=23% Similarity=0.305 Sum_probs=197.9
Q ss_pred hccccCccCceeEEEEEec-CCceEEEEEecccCh------hhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEe
Q 044996 373 SAEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNN------VGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHE 445 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 445 (678)
..+.||+|+||.||+|... ++..||+|.++.... ...+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 95 (321)
T 2a2a_A 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILE 95 (321)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred EeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEE
Confidence 3567999999999999865 688999999875322 246789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCC----ceEEeecCCc
Q 044996 446 FVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESL----EPVLADYGLI 521 (678)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~----~~kl~DfGla 521 (678)
|+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++ .+||+|||++
T Consensus 96 ~~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~lH~~----~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 96 LVSGGELFDFLAQKE-----SLSEEEATSFIKQILDGVNYLHTK----KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp CCCSCBHHHHHHTCS-----CEEHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred cCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC----CeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 999999999997542 589999999999999999999976 899999999999999888 7999999999
Q ss_pred cccCccc---cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccc
Q 044996 522 PVMNQES---AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRT 598 (678)
Q Consensus 522 ~~~~~~~---~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 598 (678)
+...... ...++..|+|||++.+..++.++|||||||++|||++|+.||.. ....+..........
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~--------~~~~~~~~~i~~~~~--- 235 (321)
T 2a2a_A 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG--------DTKQETLANITSVSY--- 235 (321)
T ss_dssp EECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC--------SSHHHHHHHHHTTCC---
T ss_pred eecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCC--------CCHHHHHHHHHhccc---
Confidence 8765432 23467889999999988999999999999999999999999962 222333333332211
Q ss_pred cccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 599 EVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 599 ~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
..++.+... ....+.+++.+||+.||++|||+.|+++
T Consensus 236 -~~~~~~~~~-----~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 236 -DFDEEFFSH-----TSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp -CCCHHHHTT-----CCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred -ccChhhhcc-----cCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 111221111 1234677888999999999999999986
No 137
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=6.1e-39 Score=328.83 Aligned_cols=247 Identities=18% Similarity=0.213 Sum_probs=198.7
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCCH
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSL 452 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL 452 (678)
.+.||+|+||.||+|... ++..+|+|++........+.+.+|++++++++||||+++++++.+.+..++||||+++++|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 93 (277)
T 3f3z_A 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGEL 93 (277)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred eeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcH
Confidence 467999999999999865 4678999999876556678899999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEe---cCCCceEEeecCCccccCcc--
Q 044996 453 AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLL---NESLEPVLADYGLIPVMNQE-- 527 (678)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl---~~~~~~kl~DfGla~~~~~~-- 527 (678)
.+++.... .+++.++..|+.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||++......
T Consensus 94 ~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~ 164 (277)
T 3f3z_A 94 FERVVHKR-----VFRESDAARIMKDVLSAVAYCHKL----NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 164 (277)
T ss_dssp HHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC
T ss_pred HHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccc
Confidence 99987643 489999999999999999999976 79999999999999 78899999999999766543
Q ss_pred -ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhh
Q 044996 528 -SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMA 606 (678)
Q Consensus 528 -~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~ 606 (678)
....++..|+|||++.+ .++.++||||||+++|||++|+.||.. ....+............ .....
T Consensus 165 ~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~--------~~~~~~~~~~~~~~~~~---~~~~~- 231 (277)
T 3f3z_A 165 MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSA--------PTDSEVMLKIREGTFTF---PEKDW- 231 (277)
T ss_dssp BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHCCCCC---CHHHH-
T ss_pred hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCC--------CCHHHHHHHHHhCCCCC---Cchhh-
Confidence 23346788999999865 589999999999999999999999962 12222222222221111 00000
Q ss_pred cccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH--HHHHhh
Q 044996 607 DERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE--KIEEVK 647 (678)
Q Consensus 607 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~--~L~~i~ 647 (678)
. .....+.+++.+|++.||.+|||+.|+++ .+++..
T Consensus 232 -~----~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 269 (277)
T 3f3z_A 232 -L----NVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQL 269 (277)
T ss_dssp -T----TSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHH
T ss_pred -h----cCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhccc
Confidence 0 11235677888999999999999999986 444443
No 138
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.8e-39 Score=355.25 Aligned_cols=238 Identities=20% Similarity=0.321 Sum_probs=196.2
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC---hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN---NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.+++.++||||+++++++...+..++||||+++
T Consensus 21 ~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~g 100 (476)
T 2y94_A 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSG 100 (476)
T ss_dssp EEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence 467999999999999875 78999999997532 12356789999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc-
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES- 528 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~- 528 (678)
|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 101 g~L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~----givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~ 171 (476)
T 2y94_A 101 GELFDYICKNG-----RLDEKESRRLFQQILSGVDYCHRH----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 171 (476)
T ss_dssp EEHHHHTTSSS-----SCCHHHHHHHHHHHHHHHHHHHTT----TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CCCcccccHHHEEEecCCCeEEEeccchhhcccccc
Confidence 99999997542 589999999999999999999965 89999999999999999999999999998765432
Q ss_pred --cccccceeeCccccccCCC-CCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhh
Q 044996 529 --AQELMIAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEM 605 (678)
Q Consensus 529 --~~~~~~~y~aPE~~~~~~~-t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l 605 (678)
...++..|+|||++.+..+ +.++|||||||++|||++|+.||.. .+............... +
T Consensus 172 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~--------~~~~~~~~~i~~~~~~~-----p-- 236 (476)
T 2y94_A 172 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD--------DHVPTLFKKICDGIFYT-----P-- 236 (476)
T ss_dssp BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCC--------SSSHHHHHHHHTTCCCC-----C--
T ss_pred ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCC--------CCHHHHHHHHhcCCcCC-----C--
Confidence 3346788999999987765 6899999999999999999999972 23333333333221111 0
Q ss_pred hcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 606 ADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
......+.+++.+||+.||.+|||+.|+++
T Consensus 237 ------~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 237 ------QYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp ------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ------ccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 011234677888999999999999999997
No 139
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.1e-39 Score=354.82 Aligned_cols=244 Identities=17% Similarity=0.189 Sum_probs=192.6
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccCh---hhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNN---VGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.++||+|+||+||+|+.. +++.||+|+++.... ...+.+.+|+.++..++||||++++++|.+.+..|+|||||++
T Consensus 79 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~g 158 (437)
T 4aw2_A 79 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVG 158 (437)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCC
Confidence 568999999999999875 478899999875321 2233488999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc-
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES- 528 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~- 528 (678)
|+|.+++..... .+++..+..++.||+.||+|||+. +|+||||||+||||+.++.+||+|||+++......
T Consensus 159 g~L~~~l~~~~~----~l~e~~~~~~~~qi~~aL~~LH~~----giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~ 230 (437)
T 4aw2_A 159 GDLLTLLSKFED----RLPEEMARFYLAEMVIAIDSVHQL----HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 230 (437)
T ss_dssp CBHHHHHHTTTT----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CcHHHHHHHccC----CCCHHHHHHHHHHHHHHHHHHHhC----CeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCC
Confidence 999999986422 599999999999999999999976 89999999999999999999999999997654332
Q ss_pred ----cccccceeeCccccc-----cCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCcccc
Q 044996 529 ----AQELMIAYKSPEFLQ-----LGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTE 599 (678)
Q Consensus 529 ----~~~~~~~y~aPE~~~-----~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 599 (678)
...+|..|+|||++. ...++.++|||||||++|||++|+.||.. .+..+....++...... .
T Consensus 231 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~--------~~~~~~~~~i~~~~~~~-~ 301 (437)
T 4aw2_A 231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYA--------ESLVETYGKIMNHKERF-Q 301 (437)
T ss_dssp EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCC--------SSHHHHHHHHHTHHHHC-C
T ss_pred cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCC--------CChhHHHHhhhhccccc-c
Confidence 235789999999986 45789999999999999999999999962 23333333332211000 0
Q ss_pred ccchhhhcccCCHHHHHHHHHHHhhcCcccccc--CCCHHHHHH
Q 044996 600 VFDKEMADERNSEGEMVKLLKIGLACCEEEVEK--RLDLKEAVE 641 (678)
Q Consensus 600 ~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~--RPs~~ev~~ 641 (678)
-+.. .......+.+++.+|+..+|++ ||++.|+++
T Consensus 302 --~p~~-----~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 302 --FPTQ-----VTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp --CCSS-----CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred --CCcc-----cccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 0000 0011234566777999888888 999999986
No 140
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.2e-39 Score=346.10 Aligned_cols=246 Identities=15% Similarity=0.108 Sum_probs=196.1
Q ss_pred ccccCccCceeEEEEE------ecCCceEEEEEecccChhhHHHHHHHHHHHhccC---CCCccceeEEEEeCCceEEEE
Q 044996 374 AEILGSGCFGSSYKAS------LSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLR---HPNLLPLVAYYYRKEEKLLVH 444 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~~~~~~~~~~~lv~ 444 (678)
.++||+|+||+||+|. ..+++.||||+++.. ...++..|++++.+++ |+||+++++++...+..++||
T Consensus 70 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~ 146 (365)
T 3e7e_A 70 HHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVG 146 (365)
T ss_dssp EEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEE
T ss_pred EEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEE
Confidence 4679999999999993 457889999999754 3456778888888886 999999999999999999999
Q ss_pred eccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecC-----------CCce
Q 044996 445 EFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNE-----------SLEP 513 (678)
Q Consensus 445 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~-----------~~~~ 513 (678)
|||++|+|.+++..........++|..++.|+.||+.||+|||+. +|+||||||+||||+. ++.+
T Consensus 147 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~----~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~ 222 (365)
T 3e7e_A 147 ELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC----EIIHGDIKPDNFILGNGFLEQDDEDDLSAGL 222 (365)
T ss_dssp CCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT----TEECCCCSGGGEEECGGGTCC------CTTE
T ss_pred eccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC----CeecCCCCHHHEEecccccCccccccccCCE
Confidence 999999999999864433334699999999999999999999965 8999999999999998 8999
Q ss_pred EEeecCCccccCc------cccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHH
Q 044996 514 VLADYGLIPVMNQ------ESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWV 587 (678)
Q Consensus 514 kl~DfGla~~~~~------~~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~ 587 (678)
||+|||+++.+.. .....+|..|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 223 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~---------- 292 (365)
T 3e7e_A 223 ALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE---------- 292 (365)
T ss_dssp EECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE----------
T ss_pred EEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc----------
Confidence 9999999965431 123347889999999999899999999999999999999999986322110
Q ss_pred HHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccC-CCHHHHHHHHHHhhccCC
Q 044996 588 NSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKR-LDLKEAVEKIEEVKERDG 651 (678)
Q Consensus 588 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~R-Ps~~ev~~~L~~i~~~~~ 651 (678)
...+..+... ...+ .+.+++..|++.+|.+| |+++++.+.|+++.....
T Consensus 293 -----------~~~~~~~~~~-~~~~---~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~ 342 (365)
T 3e7e_A 293 -----------CKPEGLFRRL-PHLD---MWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHY 342 (365)
T ss_dssp -----------EEECSCCTTC-SSHH---HHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred -----------eeechhcccc-CcHH---HHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhh
Confidence 0011111111 1122 34556668999999998 589999999998876543
No 141
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=331.51 Aligned_cols=239 Identities=22% Similarity=0.319 Sum_probs=175.3
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccC---hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMN---NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 16 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 95 (278)
T 3cok_A 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHN 95 (278)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred eeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCC
Confidence 46799999999999986 578899999986432 12346789999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc-
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES- 528 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~- 528 (678)
++|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 96 ~~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 167 (278)
T 3cok_A 96 GEMNRYLKNRVK----PFSENEARHFMHQIITGMLYLHSH----GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167 (278)
T ss_dssp EEHHHHHHTCSS----CCCHHHHHHHHHHHHHHHHHHHHT----TEECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred CcHHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHHHC----CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence 999999986432 589999999999999999999976 89999999999999999999999999997664321
Q ss_pred ---cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhh
Q 044996 529 ---AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEM 605 (678)
Q Consensus 529 ---~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l 605 (678)
...++..|+|||++.+..++.++||||||+++|||++|+.||..... ......... .+..+
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~--------~~~~~ 231 (278)
T 3cok_A 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTV--------KNTLNKVVL--------ADYEM 231 (278)
T ss_dssp ------------------------CTHHHHHHHHHHHHHHSSCSSCCCSC--------C-----CCS--------SCCCC
T ss_pred cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhH--------HHHHHHHhh--------cccCC
Confidence 23467889999999988899999999999999999999999973211 011100000 00011
Q ss_pred hcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 606 ADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
+......+.+++.+||+.||++|||+.|+++
T Consensus 232 -----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 232 -----PSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp -----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -----ccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 1112235677888999999999999999985
No 142
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=348.18 Aligned_cols=266 Identities=20% Similarity=0.282 Sum_probs=208.1
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC-hhhHHHHHHHHHHHhccCCCCccceeEEEEeCC--ceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN-NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKE--EKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~~~lv~Ey~~~ 449 (678)
.++||+|+||+||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++...+ ..++||||+++
T Consensus 14 ~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~ 93 (396)
T 4eut_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTT
T ss_pred EEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCC
Confidence 467999999999999875 58899999997543 334677889999999999999999999998765 67999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEe----cCCCceEEeecCCccccC
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLL----NESLEPVLADYGLIPVMN 525 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl----~~~~~~kl~DfGla~~~~ 525 (678)
|+|.+++...... ..+++..++.++.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++...
T Consensus 94 g~L~~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~ 167 (396)
T 4eut_A 94 GSLYTVLEEPSNA--YGLPESEFLIVLRDVVGGMNHLREN----GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (396)
T ss_dssp EEHHHHTTSGGGT--TCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred CCHHHHHHhhhcc--cCCCHHHHHHHHHHHHHHHHHHHHC----CEEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence 9999999765321 2389999999999999999999976 89999999999999 788889999999998765
Q ss_pred ccc---cccccceeeCcccccc--------CCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcC
Q 044996 526 QES---AQELMIAYKSPEFLQL--------GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANG 594 (678)
Q Consensus 526 ~~~---~~~~~~~y~aPE~~~~--------~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~ 594 (678)
... ...++..|+|||++.+ ..++.++|||||||++|||+||+.||..... .....+.+...+...
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~----~~~~~~~~~~~~~~~ 243 (396)
T 4eut_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG----PRRNKEVMYKIITGK 243 (396)
T ss_dssp CGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTC----TTTCHHHHHHHHHSC
T ss_pred CCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCc----ccchHHHHHHHhcCC
Confidence 443 2346788999999864 5678899999999999999999999973221 123334444444332
Q ss_pred Ccc-cccc----------chhhh-cccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhcc
Q 044996 595 DNR-TEVF----------DKEMA-DERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKER 649 (678)
Q Consensus 595 ~~~-~~~~----------d~~l~-~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 649 (678)
... ...+ ...+. ...........+.+++.+||+.||++||+++|+++.++++...
T Consensus 244 p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred CcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 110 0000 00110 0112345667788899999999999999999999999988664
No 143
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=3.5e-39 Score=348.41 Aligned_cols=243 Identities=18% Similarity=0.248 Sum_probs=184.5
Q ss_pred cccCccCceeEEEEEec-CCceEEEEEecccChhhHHHHHHHHHHHh-ccCCCCccceeEEEEe----CCceEEEEeccC
Q 044996 375 EILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLG-RLRHPNLLPLVAYYYR----KEEKLLVHEFVP 448 (678)
Q Consensus 375 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~-~l~H~niv~l~~~~~~----~~~~~lv~Ey~~ 448 (678)
++||+|+||+||+|... +++.||||+++.. ..+.+|++++. ..+||||++++++|.. ....|||||||+
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~ 142 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 142 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence 57999999999999864 6889999998642 35678888874 4589999999999875 557899999999
Q ss_pred CCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecC---CCceEEeecCCccccC
Q 044996 449 KRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNE---SLEPVLADYGLIPVMN 525 (678)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~---~~~~kl~DfGla~~~~ 525 (678)
+|+|.+++..... ..+++.++..|+.||+.||.|||+. +|+||||||+|||++. ++.+||+|||+++...
T Consensus 143 gg~L~~~l~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~----~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~ 215 (400)
T 1nxk_A 143 GGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLHSI----NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215 (400)
T ss_dssp SEEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred CCcHHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHC----CccccCcCcceEEEecCCCCccEEEEecccccccC
Confidence 9999999986432 2599999999999999999999976 8999999999999997 7899999999998765
Q ss_pred cc---ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccc
Q 044996 526 QE---SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFD 602 (678)
Q Consensus 526 ~~---~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d 602 (678)
.. ....+|..|+|||++.+..++.++|||||||++|||++|+.||........ ...+.. ... .+.. ..-.
T Consensus 216 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~---~i~-~~~~--~~~~ 288 (400)
T 1nxk_A 216 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-SPGMKT---RIR-MGQY--EFPN 288 (400)
T ss_dssp -----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSS-CCSHHH---HHH-HTCC--CCCT
T ss_pred CCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccc-cHHHHH---HHH-cCcc--cCCC
Confidence 33 223457889999999989999999999999999999999999963211100 001111 111 1111 0000
Q ss_pred hhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHH
Q 044996 603 KEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEK 642 (678)
Q Consensus 603 ~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~ 642 (678)
+.. ......+.+++.+||+.||.+|||+.|+++.
T Consensus 289 ~~~------~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 289 PEW------SEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp TTT------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccc------ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 100 1123356778889999999999999999873
No 144
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=6.4e-39 Score=335.24 Aligned_cols=249 Identities=18% Similarity=0.223 Sum_probs=191.2
Q ss_pred cccCccCceeEEEEEe-cCCceEEEEEecccChhhHHHHHHHHHHHhcc-CCCCccceeEEEEeCCceEEEEeccCCCCH
Q 044996 375 EILGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRLGRL-RHPNLLPLVAYYYRKEEKLLVHEFVPKRSL 452 (678)
Q Consensus 375 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL 452 (678)
++||+|+||.||+|.. .+++.||||++........+.+.+|++++.++ +||||+++++++.+.+..++||||+++|+|
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 98 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence 5699999999999985 47889999999876556678899999999985 799999999999999999999999999999
Q ss_pred HHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCc---eEEeecCCccccCcc--
Q 044996 453 AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLE---PVLADYGLIPVMNQE-- 527 (678)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~---~kl~DfGla~~~~~~-- 527 (678)
.+++.... .+++.++..++.||+.||+|||+. +|+||||||+|||++.++. +||+|||+++.....
T Consensus 99 ~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~----~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~ 169 (316)
T 2ac3_A 99 LSHIHKRR-----HFNELEASVVVQDVASALDFLHNK----GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD 169 (316)
T ss_dssp HHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------
T ss_pred HHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhC----CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCc
Confidence 99998653 489999999999999999999977 7999999999999998776 999999998765321
Q ss_pred ---------ccccccceeeCcccccc-----CCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCC---CC----hHHH
Q 044996 528 ---------SAQELMIAYKSPEFLQL-----GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKAD---GD----LASW 586 (678)
Q Consensus 528 ---------~~~~~~~~y~aPE~~~~-----~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~---~~----l~~~ 586 (678)
....++..|+|||++.. ..++.++|||||||++|||++|+.||.......... .. ....
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 249 (316)
T 2ac3_A 170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNML 249 (316)
T ss_dssp ------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHH
T ss_pred cccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHH
Confidence 11236788999999864 568999999999999999999999997432111000 00 0111
Q ss_pred HHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 587 VNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 587 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.......... ..+... . .....+.+++.+||+.||.+|||+.|+++
T Consensus 250 ~~~i~~~~~~---~~~~~~--~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 250 FESIQEGKYE---FPDKDW--A----HISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHCCCC---CCHHHH--T----TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHhccCcc---cCchhc--c----cCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 1111111100 000000 0 11235778888999999999999999987
No 145
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=7e-39 Score=328.83 Aligned_cols=239 Identities=22% Similarity=0.293 Sum_probs=193.2
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC---hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN---NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||+++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 93 (279)
T 3fdn_A 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPL 93 (279)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred eeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCC
Confidence 467999999999999764 56789999986432 22356789999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc--
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE-- 527 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~-- 527 (678)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 94 ~~l~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~----~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~ 164 (279)
T 3fdn_A 94 GTVYRELQKLS-----KFDEQRTATYITELANALSYCHSK----RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 164 (279)
T ss_dssp EEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTT----TCEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC----CEecccCChHhEEEcCCCCEEEEeccccccCCcccc
Confidence 99999997653 489999999999999999999965 8999999999999999999999999998665433
Q ss_pred ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhc
Q 044996 528 SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMAD 607 (678)
Q Consensus 528 ~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~ 607 (678)
....++..|+|||++.+..++.++||||||+++|||++|+.||.. ....+............
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~--------~~~~~~~~~~~~~~~~~---------- 226 (279)
T 3fdn_A 165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQETYKRISRVEFTF---------- 226 (279)
T ss_dssp ---CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCC--------SSHHHHHHHHHHTCCCC----------
T ss_pred cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCC--------CcHHHHHHHHHhCCCCC----------
Confidence 233467889999999988999999999999999999999999962 22223322222211111
Q ss_pred ccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHH
Q 044996 608 ERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEK 642 (678)
Q Consensus 608 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~ 642 (678)
.......+.+++.+||+.||.+|||+.|+++.
T Consensus 227 ---~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 227 ---PDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp ---CTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred ---CCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 11122346778889999999999999999973
No 146
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=341.90 Aligned_cols=240 Identities=19% Similarity=0.294 Sum_probs=189.2
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEeccc--ChhhHHHHHHHHHHHhccCC--CCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQM--NNVGREEFQEHMRRLGRLRH--PNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H--~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.+.||+|+||.||++...+++.||||++... .....+.+.+|++++.+++| +||+++++++...+..++|||| .+
T Consensus 14 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~-~~ 92 (343)
T 3dbq_A 14 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GN 92 (343)
T ss_dssp EEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC-CS
T ss_pred EEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEeC-CC
Confidence 4679999999999999888999999998743 34455789999999999986 9999999999999999999995 58
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc-
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES- 528 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~- 528 (678)
|+|.+++.... .+++.++..|+.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++......
T Consensus 93 ~~L~~~l~~~~-----~~~~~~~~~i~~qi~~al~~lH~~----~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~ 162 (343)
T 3dbq_A 93 IDLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQH----GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 162 (343)
T ss_dssp EEHHHHHHHSC-----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-----
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC----CeecCCCCcceEEEE-CCcEEEeecccccccCcccc
Confidence 89999998653 589999999999999999999976 799999999999997 5789999999998765432
Q ss_pred -----cccccceeeCcccccc-----------CCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHh
Q 044996 529 -----AQELMIAYKSPEFLQL-----------GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLA 592 (678)
Q Consensus 529 -----~~~~~~~y~aPE~~~~-----------~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~ 592 (678)
...++..|+|||++.+ ..++.++|||||||++|||++|+.||... ............
T Consensus 163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~-------~~~~~~~~~~~~ 235 (343)
T 3dbq_A 163 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-------INQISKLHAIID 235 (343)
T ss_dssp -------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTC-------CSHHHHHHHHHC
T ss_pred cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhh-------hhHHHHHHHHhc
Confidence 2346889999999864 67899999999999999999999999621 122222222221
Q ss_pred cCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHH
Q 044996 593 NGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEK 642 (678)
Q Consensus 593 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~ 642 (678)
..... . .+......+.+++.+||+.||.+|||+.|+++.
T Consensus 236 ~~~~~-~----------~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 236 PNHEI-E----------FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp TTSCC-C----------CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCccc-C----------CcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 11110 0 001112346778889999999999999999864
No 147
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.8e-38 Score=326.30 Aligned_cols=251 Identities=23% Similarity=0.332 Sum_probs=200.4
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccCh------hhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEec
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNN------VGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEF 446 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey 446 (678)
.+.||+|+||.||+|... +++.+|+|.++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 89 (283)
T 3bhy_A 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILEL 89 (283)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred HHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEee
Confidence 567999999999999875 688999999875321 2467899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCC----ceEEeecCCcc
Q 044996 447 VPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESL----EPVLADYGLIP 522 (678)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~----~~kl~DfGla~ 522 (678)
+++++|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||++++++ .+||+|||+++
T Consensus 90 ~~~~~L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 90 VSGGELFDFLAEKE-----SLTEDEATQFLKQILDGVHYLHSK----RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp CCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred cCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC----CccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 99999999997643 589999999999999999999976 899999999999999877 89999999997
Q ss_pred ccCccc---cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCcccc
Q 044996 523 VMNQES---AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTE 599 (678)
Q Consensus 523 ~~~~~~---~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 599 (678)
...... ...++..|+|||++.+..++.++||||||+++|||++|+.||.. ....+...........
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~--------~~~~~~~~~~~~~~~~--- 229 (283)
T 3bhy_A 161 KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG--------ETKQETLTNISAVNYD--- 229 (283)
T ss_dssp ECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC--------SSHHHHHHHHHTTCCC---
T ss_pred eccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCC--------cchHHHHHHhHhcccC---
Confidence 664432 23467889999999988999999999999999999999999962 1222222222211111
Q ss_pred ccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH--HHHHhhccC
Q 044996 600 VFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE--KIEEVKERD 650 (678)
Q Consensus 600 ~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~--~L~~i~~~~ 650 (678)
.+..... .....+.+++.+||+.||.+|||+.|+++ .++++....
T Consensus 230 -~~~~~~~-----~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~ 276 (283)
T 3bhy_A 230 -FDEEYFS-----NTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRN 276 (283)
T ss_dssp -CCHHHHT-----TCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCC
T ss_pred -Ccchhcc-----cCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHh
Confidence 1111111 11234677888999999999999999998 567665543
No 148
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.1e-39 Score=343.30 Aligned_cols=248 Identities=22% Similarity=0.226 Sum_probs=192.3
Q ss_pred hccccCccCceeEEEEEe-cCCceEEEEEeccc-----ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEec
Q 044996 373 SAEILGSGCFGSSYKASL-STGAMMVVKRFKQM-----NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEF 446 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey 446 (678)
..+.||+|+||.||+|.. .++..||+|++... .....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 30 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 109 (345)
T 3hko_A 30 LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMEL 109 (345)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeC
Confidence 357899999999999986 46788999998643 234567899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhccCCCC-----------------------------------CCCCChHHHHHHHHHHHHHHHHHHHhCC
Q 044996 447 VPKRSLAVNLHGHQALG-----------------------------------QPSLDWPSRLKIVKGVAKGLQYLYRELP 491 (678)
Q Consensus 447 ~~~gsL~~~l~~~~~~~-----------------------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~ 491 (678)
+++|+|.+++....... ...+++..+..|+.||+.||+|||+.
T Consensus 110 ~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-- 187 (345)
T 3hko_A 110 CHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ-- 187 (345)
T ss_dssp CCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred CCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC--
Confidence 99999999986311100 11235667888999999999999976
Q ss_pred CCCCcccCCCCCCEEecCCC--ceEEeecCCccccCcc--------ccccccceeeCcccccc--CCCCCcchHHHHHHH
Q 044996 492 SLIAPHGHIKSSNVLLNESL--EPVLADYGLIPVMNQE--------SAQELMIAYKSPEFLQL--GRITKKTDVWSLGVL 559 (678)
Q Consensus 492 ~~~ivHrdlk~~NILl~~~~--~~kl~DfGla~~~~~~--------~~~~~~~~y~aPE~~~~--~~~t~ksDvwS~Gvv 559 (678)
+|+||||||+|||++.++ .+||+|||+++.+... ....++..|+|||++.+ ..++.++|||||||+
T Consensus 188 --~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~i 265 (345)
T 3hko_A 188 --GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265 (345)
T ss_dssp --TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHH
T ss_pred --CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHH
Confidence 799999999999998776 8999999999765321 23346788999999865 678999999999999
Q ss_pred HHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHH
Q 044996 560 ILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEA 639 (678)
Q Consensus 560 l~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev 639 (678)
+|||++|+.||.. ....+............ ..+... .....+.+++.+||+.||.+|||+.|+
T Consensus 266 l~el~~g~~pf~~--------~~~~~~~~~~~~~~~~~---~~~~~~------~~~~~~~~li~~~l~~~p~~Rps~~~~ 328 (345)
T 3hko_A 266 LHLLLMGAVPFPG--------VNDADTISQVLNKKLCF---ENPNYN------VLSPLARDLLSNLLNRNVDERFDAMRA 328 (345)
T ss_dssp HHHHHHSSCSSCC--------SSHHHHHHHHHHCCCCT---TSGGGG------GSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred HHHHHHCCCCCCC--------CChHHHHHHHHhccccc---CCcccc------cCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 9999999999962 23333344444332211 111110 112346778889999999999999999
Q ss_pred HH
Q 044996 640 VE 641 (678)
Q Consensus 640 ~~ 641 (678)
++
T Consensus 329 l~ 330 (345)
T 3hko_A 329 LQ 330 (345)
T ss_dssp HH
T ss_pred hc
Confidence 87
No 149
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=7.1e-39 Score=331.14 Aligned_cols=252 Identities=21% Similarity=0.278 Sum_probs=191.0
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC--hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN--NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKR 450 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~g 450 (678)
.+.||+|+||+||+|... +++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~- 85 (292)
T 3o0g_A 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ- 85 (292)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-
T ss_pred eeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-
Confidence 467999999999999874 68899999997532 33457788999999999999999999999999999999999975
Q ss_pred CHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc---
Q 044996 451 SLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE--- 527 (678)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~--- 527 (678)
++.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 86 ~l~~~~~~~~~----~l~~~~~~~~~~ql~~~l~~lH~~----~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (292)
T 3o0g_A 86 DLKKYFDSCNG----DLDPEIVKSFLFQLLKGLGFCHSR----NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC 157 (292)
T ss_dssp EHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSC
T ss_pred CHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHhC----CeecCCCCHHHEEEcCCCCEEEeecccceecCCcccc
Confidence 66666654322 599999999999999999999977 8999999999999999999999999999765432
Q ss_pred -ccccccceeeCccccccCC-CCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhc-CCcccccc---
Q 044996 528 -SAQELMIAYKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLAN-GDNRTEVF--- 601 (678)
Q Consensus 528 -~~~~~~~~y~aPE~~~~~~-~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~--- 601 (678)
....++..|+|||++.+.. ++.++|||||||++|||++|+.|+.. ..+..+........ +....+..
T Consensus 158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~-------~~~~~~~~~~i~~~~~~~~~~~~~~~ 230 (292)
T 3o0g_A 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP-------GNDVDDQLKRIFRLLGTPTEEQWPSM 230 (292)
T ss_dssp CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCC-------CSSHHHHHHHHHHHHCCCCTTTCTTG
T ss_pred ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcC-------CCCHHHHHHHHHHHhCCCChhhhhhh
Confidence 2334678899999997765 79999999999999999999988641 11222222222211 00000000
Q ss_pred ch--hh----------hcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 602 DK--EM----------ADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 602 d~--~l----------~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.. .. ............+.+++.+|++.||++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 231 TKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp GGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00 00 000000112345678888999999999999999986
No 150
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=4.1e-39 Score=331.83 Aligned_cols=244 Identities=21% Similarity=0.300 Sum_probs=191.2
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC-hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN-NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRS 451 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gs 451 (678)
.+.||+|+||.||+|... ++..+|+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++|+
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 106 (285)
T 3is5_A 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGE 106 (285)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCB
T ss_pred cceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCc
Confidence 467999999999999864 67899999987543 3456789999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEe---cCCCceEEeecCCccccCcc-
Q 044996 452 LAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLL---NESLEPVLADYGLIPVMNQE- 527 (678)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl---~~~~~~kl~DfGla~~~~~~- 527 (678)
|.+++...... ...+++..+..|+.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 107 L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~----~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (285)
T 3is5_A 107 LLERIVSAQAR-GKALSEGYVAELMKQMMNALAYFHSQ----HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181 (285)
T ss_dssp HHHHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred HHHHHHhhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhC----CEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence 99998653211 12589999999999999999999976 89999999999999 45688999999999876543
Q ss_pred --ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhh
Q 044996 528 --SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEM 605 (678)
Q Consensus 528 --~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l 605 (678)
....++..|+|||++. +.++.++|||||||++|||++|+.||.. ....+............ .. .
T Consensus 182 ~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~--------~~~~~~~~~~~~~~~~~-~~---~- 247 (285)
T 3is5_A 182 HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTG--------TSLEEVQQKATYKEPNY-AV---E- 247 (285)
T ss_dssp -----CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHCCCCC-CC-----
T ss_pred cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCC--------CCHHHHHhhhccCCccc-cc---c-
Confidence 2334678899999886 5789999999999999999999999962 22333322222221111 00 0
Q ss_pred hcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 606 ADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
... ....+.+++.+||+.||++|||+.||++
T Consensus 248 -~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 248 -CRP----LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp --CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred -cCc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 001 1234677888999999999999999985
No 151
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=345.53 Aligned_cols=256 Identities=15% Similarity=0.121 Sum_probs=199.7
Q ss_pred ccccCccCceeEEEEEecC---------CceEEEEEecccChhhHHHHHHHHHHHhccCCCCccc---------------
Q 044996 374 AEILGSGCFGSSYKASLST---------GAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLP--------------- 429 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~--------------- 429 (678)
.+.||+|+||.||+|.... ++.||+|.+... +.+.+|++++++++||||++
T Consensus 47 ~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~ 121 (352)
T 2jii_A 47 KSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPT 121 (352)
T ss_dssp EEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCC
T ss_pred EEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCccCccc
Confidence 4679999999999998753 789999998753 46889999999999999987
Q ss_pred eeEEEEe-CCceEEEEeccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEec
Q 044996 430 LVAYYYR-KEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN 508 (678)
Q Consensus 430 l~~~~~~-~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~ 508 (678)
+++++.. .+..++||||+ +|+|.+++..... ..+++.+++.|+.||+.||+|||+. +|+||||||+|||++
T Consensus 122 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~----~ivH~Dikp~NIl~~ 193 (352)
T 2jii_A 122 CMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPK---HVLSERSVLQVACRLLDALEFLHEN----EYVHGNVTAENIFVD 193 (352)
T ss_dssp CCEEEEETTTEEEEEEECC-CEEHHHHHHHSGG---GCCCHHHHHHHHHHHHHHHHHHHHT----TCBCSCCCGGGEEEE
T ss_pred hhhccccCCcEEEEEecCC-CcCHHHHHHhCCc---CCCCHHHHHHHHHHHHHHHHHHHhC----CccCCCCCHHHEEEc
Confidence 6778776 67889999999 9999999986521 2599999999999999999999977 899999999999999
Q ss_pred CCC--ceEEeecCCccccCccc-----------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCcccccc
Q 044996 509 ESL--EPVLADYGLIPVMNQES-----------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQ 575 (678)
Q Consensus 509 ~~~--~~kl~DfGla~~~~~~~-----------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~ 575 (678)
.++ .+||+|||+++.+.... ...++..|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 194 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 273 (352)
T 2jii_A 194 PEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLP 273 (352)
T ss_dssp TTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred CCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Confidence 998 99999999998765432 12467889999999988999999999999999999999999973221
Q ss_pred CCCCCCChHHHHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCC
Q 044996 576 GKKADGDLASWVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGD 652 (678)
Q Consensus 576 ~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~ 652 (678)
. ...+............ ...+........ ...+.+++.+||+.||.+|||+.||++.|+++......
T Consensus 274 ~---~~~~~~~~~~~~~~~~---~~~~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 340 (352)
T 2jii_A 274 N---TEDIMKQKQKFVDKPG---PFVGPCGHWIRP----SETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRV 340 (352)
T ss_dssp C---HHHHHHHHHHHHHSCC---CEECTTSCEECC----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred C---HHHHHHHHHhccCChh---hhhhhccccCCC----cHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCC
Confidence 1 1112222222222111 122211111111 24577788899999999999999999999999876554
No 152
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=6.6e-39 Score=338.16 Aligned_cols=266 Identities=26% Similarity=0.364 Sum_probs=193.6
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHH--HhccCCCCccceeEEEEe-----CCceEEEEec
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRR--LGRLRHPNLLPLVAYYYR-----KEEKLLVHEF 446 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~--l~~l~H~niv~l~~~~~~-----~~~~~lv~Ey 446 (678)
.+.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++++.. ....++||||
T Consensus 18 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~ 93 (336)
T 3g2f_A 18 LELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEY 93 (336)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECC
T ss_pred eeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEec
Confidence 46799999999999976 68899999987432 3344444444 556899999999987653 2256899999
Q ss_pred cCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCC-----CCCCcccCCCCCCEEecCCCceEEeecCCc
Q 044996 447 VPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP-----SLIAPHGHIKSSNVLLNESLEPVLADYGLI 521 (678)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~-----~~~ivHrdlk~~NILl~~~~~~kl~DfGla 521 (678)
+++|+|.+++... ..++..+.+|+.||+.||+|||+.+. ..+|+||||||+|||++.++.+||+|||++
T Consensus 94 ~~~g~L~~~l~~~------~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a 167 (336)
T 3g2f_A 94 YPNGSLXKYLSLH------TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS 167 (336)
T ss_dssp CTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTC
T ss_pred CCCCcHHHHHhhc------ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccce
Confidence 9999999999764 36899999999999999999995421 117999999999999999999999999999
Q ss_pred cccCccc------------cccccceeeCcccccc-------CCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCC
Q 044996 522 PVMNQES------------AQELMIAYKSPEFLQL-------GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGD 582 (678)
Q Consensus 522 ~~~~~~~------------~~~~~~~y~aPE~~~~-------~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~ 582 (678)
+.+.... ...++..|+|||++.+ ..++.++|||||||++|||+||+.|+............
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~ 247 (336)
T 3g2f_A 168 MRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMA 247 (336)
T ss_dssp EECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCT
T ss_pred eecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHh
Confidence 7654321 2246789999999976 45678999999999999999998887532211110001
Q ss_pred h---------HHHHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCCC
Q 044996 583 L---------ASWVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGDE 653 (678)
Q Consensus 583 l---------~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~~ 653 (678)
+ .............. ..+.... .........+.+++.+||+.||++|||+.||++.|+++...-...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~ 323 (336)
T 3g2f_A 248 FQTEVGNHPTFEDMQVLVSREKQR-PKFPEAW---KENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERN 323 (336)
T ss_dssp THHHHCSSCCHHHHHHHHTTSCCC-CCCCTTC---CCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC-
T ss_pred hhcccCCCchHHHHHhhhcccccC-CCCCccc---ccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhc
Confidence 0 11111111111111 0000100 112235667899999999999999999999999999998766554
No 153
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=6e-39 Score=333.65 Aligned_cols=242 Identities=19% Similarity=0.269 Sum_probs=194.6
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCCH
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSL 452 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL 452 (678)
.+.||+|+||.||+|+.. +++.||+|.++.......+.+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 93 (304)
T 2jam_A 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGEL 93 (304)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred eeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccH
Confidence 567999999999999874 6889999999865555567799999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEe---cCCCceEEeecCCccccCccc-
Q 044996 453 AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLL---NESLEPVLADYGLIPVMNQES- 528 (678)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl---~~~~~~kl~DfGla~~~~~~~- 528 (678)
.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++......
T Consensus 94 ~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 164 (304)
T 2jam_A 94 FDRILERG-----VYTEKDASLVIQQVLSAVKYLHEN----GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM 164 (304)
T ss_dssp HHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTT
T ss_pred HHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcc
Confidence 99987643 489999999999999999999976 89999999999999 788999999999987654432
Q ss_pred -cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhc
Q 044996 529 -AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMAD 607 (678)
Q Consensus 529 -~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~ 607 (678)
...++..|+|||++.+..++.++|||||||++|||++|+.||.. ................. ....
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~--------~~~~~~~~~i~~~~~~~----~~~~-- 230 (304)
T 2jam_A 165 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYE--------ETESKLFEKIKEGYYEF----ESPF-- 230 (304)
T ss_dssp HHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTT--------SCHHHHHHHHHHCCCCC----CTTT--
T ss_pred ccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCC--------CCHHHHHHHHHcCCCCC----Cccc--
Confidence 22467889999999988999999999999999999999999962 22223333322221111 0111
Q ss_pred ccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 608 ERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 608 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.......+.+++.+||+.||.+|||+.|+++
T Consensus 231 ---~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 231 ---WDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp ---TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ---cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0112345778888999999999999999987
No 154
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=342.45 Aligned_cols=250 Identities=20% Similarity=0.288 Sum_probs=185.3
Q ss_pred hccccCccCceeEEEEEe-cCCceEEEEEecccChhhHHHHHHHHHHHhccC-CCCccceeEEEEe--------CCceEE
Q 044996 373 SAEILGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLR-HPNLLPLVAYYYR--------KEEKLL 442 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~--------~~~~~l 442 (678)
..++||+|+||.||+|+. .+++.||+|++........+.+.+|+.++.++. ||||+++++++.. ....++
T Consensus 32 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~l 111 (337)
T 3ll6_A 32 VRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLL 111 (337)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEE
T ss_pred EEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEE
Confidence 356799999999999986 478899999987766666788999999999996 9999999999953 334789
Q ss_pred EEeccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCC--CcccCCCCCCEEecCCCceEEeecCC
Q 044996 443 VHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLI--APHGHIKSSNVLLNESLEPVLADYGL 520 (678)
Q Consensus 443 v~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~--ivHrdlk~~NILl~~~~~~kl~DfGl 520 (678)
||||+. |+|.+++...... ..+++.+++.|+.||+.||+|||.. + |+||||||+|||++.++.+||+|||+
T Consensus 112 v~e~~~-g~L~~~l~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~----~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 184 (337)
T 3ll6_A 112 LTELCK-GQLVEFLKKMESR--GPLSCDTVLKIFYQTCRAVQHMHRQ----KPPIIHRDLKVENLLLSNQGTIKLCDFGS 184 (337)
T ss_dssp EEECCS-EEHHHHHHHHHTT--CSCCHHHHHHHHHHHHHHHHHHHTS----SSCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred EEEecC-CCHHHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhC----CCCEEEccCCcccEEECCCCCEEEecCcc
Confidence 999995 7999998753321 2599999999999999999999965 6 99999999999999999999999999
Q ss_pred ccccCccc----------------cccccceeeCcccc---ccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCC
Q 044996 521 IPVMNQES----------------AQELMIAYKSPEFL---QLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADG 581 (678)
Q Consensus 521 a~~~~~~~----------------~~~~~~~y~aPE~~---~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~ 581 (678)
++...... ...++..|+|||++ .+..++.++|||||||++|||+||+.||.....
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~------ 258 (337)
T 3ll6_A 185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK------ 258 (337)
T ss_dssp CBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred ceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH------
Confidence 98765321 22367889999998 566789999999999999999999999962111
Q ss_pred ChHHHHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCC
Q 044996 582 DLASWVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGD 652 (678)
Q Consensus 582 ~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~ 652 (678)
...+. ..... .+ .. .....+.+++.+||+.||.+|||+.|+++.|+++......
T Consensus 259 --~~~~~----~~~~~----~~---~~----~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~ 312 (337)
T 3ll6_A 259 --LRIVN----GKYSI----PP---HD----TQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNV 312 (337)
T ss_dssp -------------CCC----CT---TC----CSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTC
T ss_pred --HHhhc----CcccC----Cc---cc----ccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCC
Confidence 01110 00000 00 00 0112366788899999999999999999999999765443
No 155
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=8.5e-39 Score=328.91 Aligned_cols=242 Identities=20% Similarity=0.256 Sum_probs=196.0
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEeccc--ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQM--NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKR 450 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~g 450 (678)
.+.||+|+||.||+|... ++..||+|++... .....+.+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 90 (284)
T 3kk8_A 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 90 (284)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred hhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCC
Confidence 467999999999999864 5889999998653 3345577899999999999999999999999999999999999999
Q ss_pred CHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCc---eEEeecCCccccCcc
Q 044996 451 SLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLE---PVLADYGLIPVMNQE 527 (678)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~---~kl~DfGla~~~~~~ 527 (678)
+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||++......
T Consensus 91 ~l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 91 ELFEDIVARE-----FYSEADASHCIQQILESIAYCHSN----GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred CHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 9999887653 489999999999999999999976 7999999999999986655 999999999766543
Q ss_pred c---cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchh
Q 044996 528 S---AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKE 604 (678)
Q Consensus 528 ~---~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 604 (678)
. ...++..|+|||++.+..++.++||||||+++|||++|+.||.. ................. ..+.
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~--------~~~~~~~~~~~~~~~~~---~~~~ 230 (284)
T 3kk8_A 162 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD--------EDQHRLYAQIKAGAYDY---PSPE 230 (284)
T ss_dssp CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHTCCCC---CTTT
T ss_pred ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCC--------CchhHHHHHHHhccccC---Cchh
Confidence 2 23567889999999998999999999999999999999999962 22223333322221111 0111
Q ss_pred hhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 605 MADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 605 l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
. ......+.+++.+||+.||++|||+.|+++
T Consensus 231 ~------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 231 W------DTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp T------TTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred h------cccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0 012234677888999999999999999987
No 156
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.4e-38 Score=339.11 Aligned_cols=189 Identities=19% Similarity=0.261 Sum_probs=166.9
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccChhhHHHHHHHHHHHhccC-----CCCccceeEEEEeCCceEEEEecc
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLR-----HPNLLPLVAYYYRKEEKLLVHEFV 447 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----H~niv~l~~~~~~~~~~~lv~Ey~ 447 (678)
.+.||+|+||+||+|+. .+++.||||+++.. ....+.+..|++++++++ |||||++++++...+..++||||+
T Consensus 40 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 118 (360)
T 3llt_A 40 IRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL 118 (360)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC
T ss_pred EEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC
Confidence 46799999999999987 46889999998753 344567788999999986 999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecC------------------
Q 044996 448 PKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNE------------------ 509 (678)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~------------------ 509 (678)
+++|.+++..... ..+++.++..++.||+.||+|||+. +|+||||||+|||++.
T Consensus 119 -~~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~----~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~ 190 (360)
T 3llt_A 119 -GPSLYEIITRNNY---NGFHIEDIKLYCIEILKALNYLRKM----SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKK 190 (360)
T ss_dssp -CCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEESCTTCCEEEEEEECTTTCCE
T ss_pred -CCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHHC----CeeeCCCCcccEEEccccccccccchhccccccc
Confidence 9999999986542 2589999999999999999999976 8999999999999976
Q ss_pred -------CCceEEeecCCccccCcc-ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCcc
Q 044996 510 -------SLEPVLADYGLIPVMNQE-SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPAN 571 (678)
Q Consensus 510 -------~~~~kl~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~ 571 (678)
++.+||+|||+++..... ....++..|+|||++.+..++.++|||||||++|||+||+.||.
T Consensus 191 ~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 260 (360)
T 3llt_A 191 IQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR 260 (360)
T ss_dssp EEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred ccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCC
Confidence 789999999999865543 33456889999999999999999999999999999999999996
No 157
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=4.7e-39 Score=343.46 Aligned_cols=240 Identities=20% Similarity=0.258 Sum_probs=185.7
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC---hhhHHHHHHHHHH-HhccCCCCccceeEEEEeCCceEEEEeccC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN---NVGREEFQEHMRR-LGRLRHPNLLPLVAYYYRKEEKLLVHEFVP 448 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~-l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~ 448 (678)
.++||+|+||.||+|+.. ++..+|+|+++... ....+.+.+|..+ ++.++|||||++++++.+.+..|+||||++
T Consensus 43 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 122 (373)
T 2r5t_A 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN 122 (373)
T ss_dssp EEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCC
Confidence 467999999999999875 57889999997542 2234456677776 577899999999999999999999999999
Q ss_pred CCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc-
Q 044996 449 KRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE- 527 (678)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~- 527 (678)
+|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 123 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~----givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~ 193 (373)
T 2r5t_A 123 GGELFYHLQRER-----CFLEPRARFYAAEIASALGYLHSL----NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN 193 (373)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence 999999998653 488999999999999999999976 8999999999999999999999999999763221
Q ss_pred ---ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchh
Q 044996 528 ---SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKE 604 (678)
Q Consensus 528 ---~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 604 (678)
....+|..|+|||++.+..++.++|||||||++|||++|+.||.. .+..+....++...... .+
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~--------~~~~~~~~~i~~~~~~~----~~- 260 (373)
T 2r5t_A 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS--------RNTAEMYDNILNKPLQL----KP- 260 (373)
T ss_dssp CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC--------SBHHHHHHHHHHSCCCC----CS-
T ss_pred CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCC--------CCHHHHHHHHHhcccCC----CC-
Confidence 233578899999999999999999999999999999999999962 23333444444332111 01
Q ss_pred hhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHH
Q 044996 605 MADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKI 643 (678)
Q Consensus 605 l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L 643 (678)
.....+.+++.+||+.||.+||++.+.++.+
T Consensus 261 --------~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 261 --------NITNSARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp --------SSCHHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred --------CCCHHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 1123466777899999999999986544443
No 158
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=4.7e-39 Score=346.31 Aligned_cols=240 Identities=19% Similarity=0.300 Sum_probs=189.7
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEeccc--ChhhHHHHHHHHHHHhccC--CCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQM--NNVGREEFQEHMRRLGRLR--HPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.+.||+|+||.||+|...+++.||||++... .....+.+.+|+++|.+++ |||||++++++...+..++||| +.+
T Consensus 61 ~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~ 139 (390)
T 2zmd_A 61 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 139 (390)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCS
T ss_pred EEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCC
Confidence 4679999999999999888999999998643 3445678999999999996 5999999999999999999999 568
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc-
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES- 528 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~- 528 (678)
++|.+++.... .+++.++..|+.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++.+....
T Consensus 140 ~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~lH~~----~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 140 IDLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQH----GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp EEHHHHHHHCS-----SCCHHHHHHHHHHHHHHHHHHHTT----TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 89999998653 588999999999999999999965 899999999999996 5889999999998765432
Q ss_pred -----cccccceeeCcccccc-----------CCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHh
Q 044996 529 -----AQELMIAYKSPEFLQL-----------GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLA 592 (678)
Q Consensus 529 -----~~~~~~~y~aPE~~~~-----------~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~ 592 (678)
...++..|+|||++.+ ..++.++|||||||++|||++|+.||... ......+...+.
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~-------~~~~~~~~~~~~ 282 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-------INQISKLHAIID 282 (390)
T ss_dssp ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTC-------CCHHHHHHHHHC
T ss_pred cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhh-------hHHHHHHHHHhC
Confidence 2347889999999864 36899999999999999999999999621 122222333332
Q ss_pred cCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHH
Q 044996 593 NGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEK 642 (678)
Q Consensus 593 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~ 642 (678)
..... . + +......+.+++.+||+.||.+|||+.||++.
T Consensus 283 ~~~~~-~-----~-----~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 283 PNHEI-E-----F-----PDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp TTSCC-C-----C-----CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccC-C-----C-----CccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 21111 0 0 00112346778889999999999999999863
No 159
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.9e-40 Score=354.43 Aligned_cols=244 Identities=15% Similarity=0.104 Sum_probs=187.1
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecc---cChhhHHHHHHHH---HHHhccCCCCcccee-------EEEEeCCc
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQ---MNNVGREEFQEHM---RRLGRLRHPNLLPLV-------AYYYRKEE 439 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~---~~~~~~~~~~~e~---~~l~~l~H~niv~l~-------~~~~~~~~ 439 (678)
.+.||+|+||.||+|.. .+++.||||++.. ......+.|.+|+ +.+++++|||||+++ +++...+.
T Consensus 78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 157 (377)
T 3byv_A 78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 157 (377)
T ss_dssp EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence 46799999999999986 5689999999973 2334567899999 555666899999998 77665532
Q ss_pred -----------------eEEEEeccCCCCHHHHhhccCCCCC--CCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCC
Q 044996 440 -----------------KLLVHEFVPKRSLAVNLHGHQALGQ--PSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHI 500 (678)
Q Consensus 440 -----------------~~lv~Ey~~~gsL~~~l~~~~~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdl 500 (678)
.|+||||+ +|+|.+++........ ..++|..++.|+.||+.||+|||+. +|+||||
T Consensus 158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~----~ivHrDi 232 (377)
T 3byv_A 158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY----GLVHTYL 232 (377)
T ss_dssp CSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT----TEECSCC
T ss_pred ccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC----CeecCCC
Confidence 78999999 6899999986432111 1345688899999999999999977 8999999
Q ss_pred CCCCEEecCCCceEEeecCCccccCccc-cccccceeeCccccccC-----------CCCCcchHHHHHHHHHHHHhCCC
Q 044996 501 KSSNVLLNESLEPVLADYGLIPVMNQES-AQELMIAYKSPEFLQLG-----------RITKKTDVWSLGVLILEIMTGKF 568 (678)
Q Consensus 501 k~~NILl~~~~~~kl~DfGla~~~~~~~-~~~~~~~y~aPE~~~~~-----------~~t~ksDvwS~Gvvl~el~tg~~ 568 (678)
||+|||++.++.+||+|||+++...... ...+ ..|+|||++.+. .++.++|||||||++|||+||+.
T Consensus 233 kp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~ 311 (377)
T 3byv_A 233 RPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADL 311 (377)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred CHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCC
Confidence 9999999999999999999998655432 2335 889999999877 89999999999999999999999
Q ss_pred CccccccCCCCCCChHHHHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH--HHHHh
Q 044996 569 PANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE--KIEEV 646 (678)
Q Consensus 569 P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~--~L~~i 646 (678)
||...... +.......... .....+.+++.+||+.||.+|||+.|+++ .++++
T Consensus 312 Pf~~~~~~----------------------~~~~~~~~~~~---~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~ 366 (377)
T 3byv_A 312 PITKDAAL----------------------GGSEWIFRSCK---NIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL 366 (377)
T ss_dssp CC----------------------------CCSGGGGSSCC---CCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHH
T ss_pred CCcccccc----------------------cchhhhhhhcc---CCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHH
Confidence 99622110 00111111001 11234677888999999999999999996 45554
Q ss_pred hc
Q 044996 647 KE 648 (678)
Q Consensus 647 ~~ 648 (678)
.+
T Consensus 367 ~~ 368 (377)
T 3byv_A 367 RT 368 (377)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 160
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=343.18 Aligned_cols=233 Identities=22% Similarity=0.267 Sum_probs=191.7
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccCh--------hhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEE
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMNN--------VGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVH 444 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 444 (678)
.+.||+|+||.||+|.. .+++.||||+++.... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 29 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~ 108 (335)
T 3dls_A 29 MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVM 108 (335)
T ss_dssp EEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEE
Confidence 56799999999999975 5688999999875421 13346778999999999999999999999999999999
Q ss_pred eccCCC-CHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccc
Q 044996 445 EFVPKR-SLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPV 523 (678)
Q Consensus 445 Ey~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~ 523 (678)
||+..| +|.+++.... .+++..+..|+.||+.||+|||.. +|+||||||+|||+++++.+||+|||+++.
T Consensus 109 e~~~~g~~l~~~~~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~----~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 179 (335)
T 3dls_A 109 EKHGSGLDLFAFIDRHP-----RLDEPLASYIFRQLVSAVGYLRLK----DIIHRDIKDENIVIAEDFTIKLIDFGSAAY 179 (335)
T ss_dssp ECCTTSCBHHHHHHTCC-----CCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EeCCCCccHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC----CeEEeccCHHHEEEcCCCcEEEeecccceE
Confidence 999877 9999997643 589999999999999999999976 899999999999999999999999999987
Q ss_pred cCccc---cccccceeeCccccccCCC-CCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCcccc
Q 044996 524 MNQES---AQELMIAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTE 599 (678)
Q Consensus 524 ~~~~~---~~~~~~~y~aPE~~~~~~~-t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 599 (678)
..... ...++..|+|||++.+..+ +.++|||||||++|||++|+.||......
T Consensus 180 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----------------------- 236 (335)
T 3dls_A 180 LERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET----------------------- 236 (335)
T ss_dssp CCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-----------------------
T ss_pred CCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-----------------------
Confidence 65432 2346889999999988776 78999999999999999999999632110
Q ss_pred ccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHH
Q 044996 600 VFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEK 642 (678)
Q Consensus 600 ~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~ 642 (678)
.......... ....+.+++.+||+.||++|||+.|+++.
T Consensus 237 -~~~~~~~~~~---~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 -VEAAIHPPYL---VSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -TTTCCCCSSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -HhhccCCCcc---cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000000 12346778889999999999999999884
No 161
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=9.2e-39 Score=337.11 Aligned_cols=238 Identities=21% Similarity=0.283 Sum_probs=196.1
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEeccc---ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQM---NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.+.||+|+||.||++... +++.+++|.+... .....+.+.+|+.++++++||||+++++++.+.+..++||||+++
T Consensus 46 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 125 (335)
T 2owb_A 46 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR 125 (335)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCC
Confidence 467999999999999875 5788999988643 234567899999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc--
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE-- 527 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~-- 527 (678)
++|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 126 ~~L~~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~----~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 196 (335)
T 2owb_A 126 RSLLELHKRRK-----ALTEPEARYYLRQIVLGCQYLHRN----RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 196 (335)
T ss_dssp CBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred CCHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC----CCEecCCCchhEEEcCCCCEEEeeccCceecccCcc
Confidence 99999987643 589999999999999999999976 8999999999999999999999999999765422
Q ss_pred --ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhh
Q 044996 528 --SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEM 605 (678)
Q Consensus 528 --~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l 605 (678)
....++..|+|||++.+..++.++|||||||++|||++|+.||.. ....+............
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~--------~~~~~~~~~~~~~~~~~-------- 260 (335)
T 2owb_A 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET--------SCLKETYLRIKKNEYSI-------- 260 (335)
T ss_dssp CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCC--------SSHHHHHHHHHHTCCCC--------
T ss_pred cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCC--------CCHHHHHHHHhcCCCCC--------
Confidence 223467889999999988899999999999999999999999962 22333332222221111
Q ss_pred hcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 606 ADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.......+.+++.+||+.||++|||+.|+++
T Consensus 261 -----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 261 -----PKHINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp -----CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred -----CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0011234667888999999999999999987
No 162
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.3e-38 Score=329.50 Aligned_cols=239 Identities=21% Similarity=0.282 Sum_probs=196.1
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEeccc---ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQM---NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.+.||+|+||.||+|... +++.+|+|.+... .....+.+.+|+.++++++||||+++++++.+.+..++||||+++
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 99 (294)
T 2rku_A 20 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR 99 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCC
Confidence 467999999999999875 5788999988653 234567889999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc--
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE-- 527 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~-- 527 (678)
++|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 100 ~~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (294)
T 2rku_A 100 RSLLELHKRRK-----ALTEPEARYYLRQIVLGCQYLHRN----RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170 (294)
T ss_dssp CBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence 99999987643 589999999999999999999976 8999999999999999999999999999765422
Q ss_pred --ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhh
Q 044996 528 --SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEM 605 (678)
Q Consensus 528 --~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l 605 (678)
....++..|+|||++.+..++.++||||||+++|||++|+.||.. ....+............
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~--------~~~~~~~~~~~~~~~~~-------- 234 (294)
T 2rku_A 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET--------SCLKETYLRIKKNEYSI-------- 234 (294)
T ss_dssp CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCC--------SSHHHHHHHHHTTCCCC--------
T ss_pred ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHHhhccCCC--------
Confidence 223467889999999988899999999999999999999999962 22233322222221111
Q ss_pred hcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHH
Q 044996 606 ADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEK 642 (678)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~ 642 (678)
.......+.+++.+||+.||++|||+.|+++.
T Consensus 235 -----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 235 -----PKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp -----CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred -----ccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00112346778889999999999999999874
No 163
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.4e-38 Score=324.07 Aligned_cols=238 Identities=20% Similarity=0.310 Sum_probs=189.6
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC---hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN---NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 95 (276)
T 2h6d_A 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95 (276)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCC
Confidence 467999999999999875 78899999987532 23356789999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc-
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES- 528 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~- 528 (678)
++|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++.......
T Consensus 96 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 166 (276)
T 2h6d_A 96 GELFDYICKHG-----RVEEMEARRLFQQILSAVDYCHRH----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166 (276)
T ss_dssp CBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHH----CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred CcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC----CCccCCCChhhEEECCCCCEEEeecccccccCCCcc
Confidence 99999997653 489999999999999999999987 79999999999999999999999999998765432
Q ss_pred --cccccceeeCccccccCCC-CCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhh
Q 044996 529 --AQELMIAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEM 605 (678)
Q Consensus 529 --~~~~~~~y~aPE~~~~~~~-t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l 605 (678)
...++..|+|||.+.+..+ +.++||||||+++|||++|+.||.. .................
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~--------~~~~~~~~~~~~~~~~~-------- 230 (276)
T 2h6d_A 167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD--------EHVPTLFKKIRGGVFYI-------- 230 (276)
T ss_dssp ----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHCCCCC--------
T ss_pred eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCC--------CcHHHHHHHhhcCcccC--------
Confidence 2346788999999987765 6899999999999999999999962 22233332222211111
Q ss_pred hcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 606 ADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.......+.+++.+||+.||.+|||+.|+++
T Consensus 231 -----~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 231 -----PEYLNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp -----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -----chhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 0111234677888999999999999999987
No 164
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=8e-39 Score=331.05 Aligned_cols=255 Identities=15% Similarity=0.176 Sum_probs=198.6
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEE-EeCCceEEEEeccCCCC
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYY-YRKEEKLLVHEFVPKRS 451 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~-~~~~~~~lv~Ey~~~gs 451 (678)
.+.||+|+||.||+|+. .+++.||||++..... .+++.+|++++++++|++++..+.++ ...+..++||||+ +++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (296)
T 3uzp_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPS 90 (296)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCC
Confidence 46799999999999986 6789999999875432 34688999999999998877777666 4566789999999 999
Q ss_pred HHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEe---cCCCceEEeecCCccccCcc-
Q 044996 452 LAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLL---NESLEPVLADYGLIPVMNQE- 527 (678)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl---~~~~~~kl~DfGla~~~~~~- 527 (678)
|.+++..... .+++.++..++.||+.||+|||+. +|+||||||+|||+ ++++.+||+|||+++.....
T Consensus 91 L~~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~----~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~ 162 (296)
T 3uzp_A 91 LEDLFNFCSR----KFSLKTVLLLADQMISRIEYIHSK----NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 162 (296)
T ss_dssp HHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred HHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHhC----CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccc
Confidence 9999975432 599999999999999999999976 89999999999999 58899999999999765443
Q ss_pred ----------ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCcc
Q 044996 528 ----------SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNR 597 (678)
Q Consensus 528 ----------~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 597 (678)
....++..|+|||++.+..++.++|||||||++|||++|+.||........ ...+...........
T Consensus 163 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~--- 238 (296)
T 3uzp_A 163 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK-RQKYERISEKKMSTP--- 238 (296)
T ss_dssp TCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS-SSHHHHHHHHHHHSC---
T ss_pred cccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhh-hhhhhhhcccccCCc---
Confidence 223467889999999998999999999999999999999999974321111 011111111111100
Q ss_pred ccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCC
Q 044996 598 TEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGD 652 (678)
Q Consensus 598 ~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~ 652 (678)
.+.+. . .....+.+++.+||+.||.+|||+.+|++.|+++......
T Consensus 239 ----~~~~~-~----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 284 (296)
T 3uzp_A 239 ----IEVLC-K----GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp ----HHHHT-T----TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred ----hHHHH-h----hCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC
Confidence 00010 1 1124577888899999999999999999999999776654
No 165
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=5.1e-39 Score=329.65 Aligned_cols=250 Identities=20% Similarity=0.257 Sum_probs=194.2
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEeccc--ChhhHHHHHHHHHHHhccCCCCccceeEEEEe--CCceEEEEeccC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQM--NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR--KEEKLLVHEFVP 448 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~~~~lv~Ey~~ 448 (678)
.+.||+|+||.||+|... +++.||+|.+... .....+.+.+|++++++++||||+++++++.. ....++||||++
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~ 90 (279)
T 2w5a_A 11 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 90 (279)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCT
T ss_pred ehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCC
Confidence 467999999999999874 6889999998753 34456789999999999999999999998864 567899999999
Q ss_pred CCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCC-CCCCcccCCCCCCEEecCCCceEEeecCCccccCcc
Q 044996 449 KRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP-SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE 527 (678)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~-~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 527 (678)
+|+|.+++...... ...+++..++.++.|++.||+|||+... ..+|+||||||+|||+++++.+||+|||+++.....
T Consensus 91 ~~~L~~~l~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~ 169 (279)
T 2w5a_A 91 GGDLASVITKGTKE-RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169 (279)
T ss_dssp TEEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---
T ss_pred CCCHHHHHHhhccc-CCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeeccc
Confidence 99999999764321 2258999999999999999999998720 012999999999999999999999999998776543
Q ss_pred c----cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccch
Q 044996 528 S----AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDK 603 (678)
Q Consensus 528 ~----~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~ 603 (678)
. ...++..|+|||++.+..++.++||||||+++|||++|+.||.. ....+....... +... .
T Consensus 170 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~--------~~~~~~~~~i~~-~~~~-~---- 235 (279)
T 2w5a_A 170 TSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA--------FSQKELAGKIRE-GKFR-R---- 235 (279)
T ss_dssp CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHH-TCCC-C----
T ss_pred cccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcc--------cCHHHHHHHHhh-cccc-c----
Confidence 2 22457889999999988999999999999999999999999862 122222222222 1110 0
Q ss_pred hhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHH
Q 044996 604 EMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIE 644 (678)
Q Consensus 604 ~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~ 644 (678)
+ .......+.+++.+||+.||.+|||+.||++.+.
T Consensus 236 -~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 236 -I-----PYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp -C-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred -C-----CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 0 1112245778888999999999999999998654
No 166
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1e-38 Score=355.67 Aligned_cols=244 Identities=20% Similarity=0.251 Sum_probs=196.8
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC---hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN---NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.++||+|+||.||+|+.. +|+.||+|++.... ......+.+|+++|++++|||||++++++.+.+..|+||||+++
T Consensus 189 ~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~g 268 (576)
T 2acx_A 189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG 268 (576)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCC
Confidence 467999999999999874 68999999987532 23456788999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc--
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE-- 527 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~-- 527 (678)
|+|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+||||+.++.+||+|||+++.+...
T Consensus 269 g~L~~~l~~~~~---~~l~e~~~~~i~~qIl~aL~yLH~~----gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~ 341 (576)
T 2acx_A 269 GDLKFHIYHMGQ---AGFPEARAVFYAAEICCGLEDLHRE----RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341 (576)
T ss_dssp CBHHHHHHSSSS---CCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred CcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHHC----CEeccCCchheEEEeCCCCeEEEecccceecccCcc
Confidence 999999976532 2489999999999999999999976 8999999999999999999999999999876543
Q ss_pred -ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhh
Q 044996 528 -SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMA 606 (678)
Q Consensus 528 -~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~ 606 (678)
....+|..|+|||++.+..++.++|||||||++|||++|+.||.... ...................
T Consensus 342 ~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~----~~~~~~~i~~~i~~~~~~~--------- 408 (576)
T 2acx_A 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK----KKIKREEVERLVKEVPEEY--------- 408 (576)
T ss_dssp EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSS----SCCCHHHHHHHHHHCCCCC---------
T ss_pred ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccc----cchhHHHHHHHhhcccccC---------
Confidence 23457889999999998889999999999999999999999997321 1112222222222111111
Q ss_pred cccCCHHHHHHHHHHHhhcCccccccCC-----CHHHHHH
Q 044996 607 DERNSEGEMVKLLKIGLACCEEEVEKRL-----DLKEAVE 641 (678)
Q Consensus 607 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-----s~~ev~~ 641 (678)
.......+.+++.+||+.||.+|| ++.||++
T Consensus 409 ----p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 409 ----SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp ----CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ----CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 111223467788899999999999 7888875
No 167
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=349.27 Aligned_cols=243 Identities=19% Similarity=0.180 Sum_probs=192.1
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC---hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN---NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.++||+|+||.||+|+.. +++.||+|+++... ....+.+.+|+.++.+++||||+++++++.+.+..|+||||+++
T Consensus 66 ~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~g 145 (412)
T 2vd5_A 66 LKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVG 145 (412)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCC
Confidence 467999999999999874 68999999997532 12234588999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc-
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES- 528 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~- 528 (678)
|+|.+++..... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 146 g~L~~~l~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~----giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~ 217 (412)
T 2vd5_A 146 GDLLTLLSKFGE----RIPAEMARFYLAEIVMAIDSVHRL----GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT 217 (412)
T ss_dssp CBHHHHHHHHSS----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHC----CeeecccCHHHeeecCCCCEEEeechhheeccCCCc
Confidence 999999986432 589999999999999999999976 89999999999999999999999999998765432
Q ss_pred ----cccccceeeCccccc-------cCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCcc
Q 044996 529 ----AQELMIAYKSPEFLQ-------LGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNR 597 (678)
Q Consensus 529 ----~~~~~~~y~aPE~~~-------~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 597 (678)
...+|..|+|||++. ...++.++|||||||++|||++|+.||.. .+..+....++......
T Consensus 218 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~--------~~~~~~~~~i~~~~~~~ 289 (412)
T 2vd5_A 218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYA--------DSTAETYGKIVHYKEHL 289 (412)
T ss_dssp EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCC--------SSHHHHHHHHHTHHHHC
T ss_pred cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCC--------CCHHHHHHHHHhcccCc
Confidence 235788999999987 35689999999999999999999999962 22233333332211000
Q ss_pred ccccchhhhcccCCHHHHHHHHHHHhhcCccccccC---CCHHHHHH
Q 044996 598 TEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKR---LDLKEAVE 641 (678)
Q Consensus 598 ~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~R---Ps~~ev~~ 641 (678)
.-+.+ . ......+.+++.+||. +|.+| |++.|+++
T Consensus 290 ---~~p~~-~----~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 290 ---SLPLV-D----EGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp ---CCC---------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred ---CCCcc-c----cCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 00100 0 0112346777779999 99998 58998875
No 168
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=3.6e-38 Score=325.38 Aligned_cols=242 Identities=20% Similarity=0.319 Sum_probs=191.4
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEeccc--ChhhHHHHHHHHHHHhccCCCCccceeEEEEe----CCceEEEEec
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQM--NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR----KEEKLLVHEF 446 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~~lv~Ey 446 (678)
.+.||+|+||.||+|.. .++..|++|.+... .....+.+.+|+.++++++||||+++++++.. ....++||||
T Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~ 110 (290)
T 1t4h_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEEC
T ss_pred eeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEe
Confidence 45699999999999976 46778999988743 34556789999999999999999999999875 3458999999
Q ss_pred cCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEec-CCCceEEeecCCccccC
Q 044996 447 VPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN-ESLEPVLADYGLIPVMN 525 (678)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~-~~~~~kl~DfGla~~~~ 525 (678)
+++|+|.+++.... .+++..+..++.||+.||.|||+.. .+|+||||||+|||++ +++.+||+|||++....
T Consensus 111 ~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~--~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 111 MTSGTLKTYLKRFK-----VMKIKVLRSWCRQILKGLQFLHTRT--PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp CCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTSS--SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred cCCCCHHHHHHHcc-----CCCHHHHHHHHHHHHHHHHHHHcCC--CCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 99999999997643 5899999999999999999999661 1299999999999998 78999999999997654
Q ss_pred ccc--cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccch
Q 044996 526 QES--AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDK 603 (678)
Q Consensus 526 ~~~--~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~ 603 (678)
... ...++..|+|||++. +.++.++|||||||++|||++|+.||... .............. .. ..++
T Consensus 184 ~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~-------~~~~~~~~~~~~~~-~~-~~~~- 252 (290)
T 1t4h_A 184 ASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSEC-------QNAAQIYRRVTSGV-KP-ASFD- 252 (290)
T ss_dssp TTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTC-------SSHHHHHHHHTTTC-CC-GGGG-
T ss_pred ccccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCc-------CcHHHHHHHHhccC-Cc-cccC-
Confidence 432 234678999999886 56999999999999999999999999621 22333332222211 11 1111
Q ss_pred hhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 604 EMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 604 ~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
... ...+.+++.+||+.||.+|||+.|+++
T Consensus 253 ----~~~----~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 253 ----KVA----IPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ----GCC----CHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ----CCC----CHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 111 234778888999999999999999985
No 169
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.7e-39 Score=344.36 Aligned_cols=187 Identities=26% Similarity=0.374 Sum_probs=154.7
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEeccc--ChhhHHHHHHHHHHHhccC-CCCccceeEEEEeCC--ceEEEEecc
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQM--NNVGREEFQEHMRRLGRLR-HPNLLPLVAYYYRKE--EKLLVHEFV 447 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~--~~~lv~Ey~ 447 (678)
.+.||+|+||.||+|.. .+++.||||++... .....+.+.+|+.++.++. ||||+++++++...+ ..|+|||||
T Consensus 14 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~ 93 (388)
T 3oz6_A 14 VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93 (388)
T ss_dssp EEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECC
T ss_pred EEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEeccc
Confidence 46799999999999976 56889999998642 3455667889999999997 999999999998654 689999999
Q ss_pred CCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc
Q 044996 448 PKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE 527 (678)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 527 (678)
+ |+|..++... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.+...
T Consensus 94 ~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH~~----~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 162 (388)
T 3oz6_A 94 E-TDLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLHSG----GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNI 162 (388)
T ss_dssp S-EEHHHHHHHT------CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTCCEEECCCTTCEESSSC
T ss_pred C-cCHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC----CEEeCCCCHHHeEEcCCCCEEecCCccccccccc
Confidence 7 6999998753 589999999999999999999976 8999999999999999999999999999765321
Q ss_pred -------------------------ccccccceeeCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCcc
Q 044996 528 -------------------------SAQELMIAYKSPEFLQL-GRITKKTDVWSLGVLILEIMTGKFPAN 571 (678)
Q Consensus 528 -------------------------~~~~~~~~y~aPE~~~~-~~~t~ksDvwS~Gvvl~el~tg~~P~~ 571 (678)
....+|..|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~ 232 (388)
T 3oz6_A 163 RRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFP 232 (388)
T ss_dssp CCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred ccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCC
Confidence 11246788999999876 678999999999999999999999996
No 170
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.2e-38 Score=327.84 Aligned_cols=240 Identities=18% Similarity=0.272 Sum_probs=193.4
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEeccc--ChhhHHHHHHHHHHHhcc-CCCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQM--NNVGREEFQEHMRRLGRL-RHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.+.||+|+||.||+|... +++.||+|+++.. ......++.+|+..+.++ +||||+++++++.+.+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 95 (289)
T 1x8b_A 16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNG 95 (289)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred hhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCC
Confidence 467999999999999875 7899999998753 234566788999999999 999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecC-------------------C
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNE-------------------S 510 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~-------------------~ 510 (678)
|+|.+++...... ...+++.++..|+.||+.||+|||+. +|+||||||+|||++. .
T Consensus 96 ~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~----~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~ 170 (289)
T 1x8b_A 96 GSLADAISENYRI-MSYFKEAELKDLLLQVGRGLRYIHSM----SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNK 170 (289)
T ss_dssp CBHHHHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEEC--------------------C
T ss_pred CcHHHHHHhhccc-ccCCCHHHHHHHHHHHHHHHHHHHhC----CEeecCCCHHHEEEcCCCCCcccccccccccccCCc
Confidence 9999999764221 12589999999999999999999976 8999999999999984 4
Q ss_pred CceEEeecCCccccCccccccccceeeCccccccC-CCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 044996 511 LEPVLADYGLIPVMNQESAQELMIAYKSPEFLQLG-RITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNS 589 (678)
Q Consensus 511 ~~~kl~DfGla~~~~~~~~~~~~~~y~aPE~~~~~-~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~ 589 (678)
..+||+|||++..........++..|+|||++.+. .++.++|||||||++|||++|+.|+.. . ..| ..
T Consensus 171 ~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~--------~--~~~-~~ 239 (289)
T 1x8b_A 171 VMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRN--------G--DQW-HE 239 (289)
T ss_dssp CCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSS--------S--HHH-HH
T ss_pred eEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcc--------h--hHH-HH
Confidence 47999999999887766666788999999999765 567899999999999999999977641 1 111 11
Q ss_pred HHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 590 VLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 590 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.. .+.. +.+. ......+.+++.+||+.||++|||+.|+++
T Consensus 240 ~~-~~~~------~~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 240 IR-QGRL------PRIP-----QVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp HH-TTCC------CCCS-----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HH-cCCC------CCCC-----cccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 11 1111 0110 111234677888999999999999999986
No 171
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.5e-38 Score=349.62 Aligned_cols=249 Identities=16% Similarity=0.236 Sum_probs=185.8
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEeccc--ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCC------ceEEEE
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQM--NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKE------EKLLVH 444 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------~~~lv~ 444 (678)
.+.||+|+||+||+|.. .+++.||||++... .....+.+.+|+.++++++|||||++++++...+ ..|+||
T Consensus 67 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~ 146 (464)
T 3ttj_A 67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 146 (464)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEE
T ss_pred EEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEE
Confidence 46799999999999975 46889999999753 3445678899999999999999999999997543 569999
Q ss_pred eccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCcccc
Q 044996 445 EFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM 524 (678)
Q Consensus 445 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 524 (678)
|||++ +|.+.+.. .+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 147 E~~~~-~l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH~~----~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 214 (464)
T 3ttj_A 147 ELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSA----GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214 (464)
T ss_dssp ECCSE-EHHHHHTS-------CCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred eCCCC-CHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence 99975 57666642 388999999999999999999976 8999999999999999999999999999876
Q ss_pred Ccc---ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHH-------------
Q 044996 525 NQE---SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVN------------- 588 (678)
Q Consensus 525 ~~~---~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~------------- 588 (678)
... ....+|..|+|||++.+..|+.++|||||||++|||++|+.||... .....|..
T Consensus 215 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~-------~~~~~~~~i~~~lg~p~~~~~ 287 (464)
T 3ttj_A 215 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-------DYIDQWNKVIEQLGTPCPEFM 287 (464)
T ss_dssp --CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS-------SHHHHHHHHHHHHCSCCHHHH
T ss_pred CCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCC-------CHHHHHHHHHHhcCCCCHHHH
Confidence 543 2235678899999999999999999999999999999999999621 11111111
Q ss_pred --------HHHhcCCccccccchhh-hcc---cC---CHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 589 --------SVLANGDNRTEVFDKEM-ADE---RN---SEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 589 --------~~~~~~~~~~~~~d~~l-~~~---~~---~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
..+..........-+.+ ... .. .......+.+++.+||+.||++|||+.|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 288 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp TTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 11111000000000000 000 00 0112456788999999999999999999987
No 172
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=6e-39 Score=331.89 Aligned_cols=255 Identities=15% Similarity=0.168 Sum_probs=197.2
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEE-EeCCceEEEEeccCCCC
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYY-YRKEEKLLVHEFVPKRS 451 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~-~~~~~~~lv~Ey~~~gs 451 (678)
.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|++++++++|++++..++++ ...+..++||||+ +|+
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (296)
T 4hgt_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPS 90 (296)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred eeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCC
Confidence 46799999999999986 578899999866432 224588899999999998888777766 4566789999999 999
Q ss_pred HHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEe---cCCCceEEeecCCccccCccc
Q 044996 452 LAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLL---NESLEPVLADYGLIPVMNQES 528 (678)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl---~~~~~~kl~DfGla~~~~~~~ 528 (678)
|.+++..... .+++.++..++.||+.||+|||+. +|+||||||+|||+ ++++.+||+|||+++......
T Consensus 91 L~~~~~~~~~----~~~~~~~~~i~~qi~~~l~~LH~~----~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~ 162 (296)
T 4hgt_A 91 LEDLFNFCSR----KFSLKTVLLLADQMISRIEYIHSK----NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 162 (296)
T ss_dssp HHHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred HHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC----CeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcc
Confidence 9999975432 599999999999999999999977 79999999999999 789999999999997654321
Q ss_pred -----------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCcc
Q 044996 529 -----------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNR 597 (678)
Q Consensus 529 -----------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 597 (678)
...++..|+|||++.+..++.++|||||||++|||++|+.||........ ...+...........
T Consensus 163 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~--- 238 (296)
T 4hgt_A 163 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK-RQKYERISEKKMSTP--- 238 (296)
T ss_dssp TCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS-SSHHHHHHHHHHHSC---
T ss_pred cCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhh-hhhhhhhhcccccch---
Confidence 23467889999999998999999999999999999999999974322111 011111111111000
Q ss_pred ccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCC
Q 044996 598 TEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGD 652 (678)
Q Consensus 598 ~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~ 652 (678)
.+.+ .. .....+.+++.+||+.||++|||+.+|++.|+++......
T Consensus 239 ----~~~~-~~----~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~ 284 (296)
T 4hgt_A 239 ----IEVL-CK----GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp ----HHHH-TT----TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTC
T ss_pred ----hhhh-hc----cCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 0000 00 1124577888899999999999999999999999876654
No 173
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=2.3e-38 Score=325.79 Aligned_cols=243 Identities=22% Similarity=0.279 Sum_probs=197.3
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC---hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN---NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 19 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 98 (284)
T 2vgo_A 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPR 98 (284)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred eheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCC
Confidence 467999999999999875 57789999986432 22356789999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc--
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE-- 527 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~-- 527 (678)
|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 99 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 169 (284)
T 2vgo_A 99 GELYKELQKHG-----RFDEQRSATFMEELADALHYCHER----KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR 169 (284)
T ss_dssp EEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTT----TEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCB
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CceecCCCHHHEEEcCCCCEEEecccccccCccccc
Confidence 99999997653 489999999999999999999965 8999999999999999999999999998665432
Q ss_pred ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhc
Q 044996 528 SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMAD 607 (678)
Q Consensus 528 ~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~ 607 (678)
....++..|+|||++.+..++.++||||||+++|||++|+.||.. .................
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~--------~~~~~~~~~~~~~~~~~---------- 231 (284)
T 2vgo_A 170 RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS--------PSHTETHRRIVNVDLKF---------- 231 (284)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC--------SSHHHHHHHHHTTCCCC----------
T ss_pred ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCC--------CCHhHHHHHHhccccCC----------
Confidence 233467889999999988999999999999999999999999962 22222222222211111
Q ss_pred ccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH--HHHHh
Q 044996 608 ERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE--KIEEV 646 (678)
Q Consensus 608 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~--~L~~i 646 (678)
.......+.+++.+|++.||.+|||+.|+++ .++..
T Consensus 232 ---~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~ 269 (284)
T 2vgo_A 232 ---PPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKAN 269 (284)
T ss_dssp ---CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHH
T ss_pred ---CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhh
Confidence 0111234677888999999999999999987 44443
No 174
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.4e-39 Score=341.60 Aligned_cols=243 Identities=21% Similarity=0.278 Sum_probs=193.9
Q ss_pred ccccCccCceeEEEEEe----cCCceEEEEEecccC----hhhHHHHHHHHHHHhcc-CCCCccceeEEEEeCCceEEEE
Q 044996 374 AEILGSGCFGSSYKASL----STGAMMVVKRFKQMN----NVGREEFQEHMRRLGRL-RHPNLLPLVAYYYRKEEKLLVH 444 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 444 (678)
.+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|++++.++ +||||+++++++...+..++||
T Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 138 (355)
T 1vzo_A 59 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLIL 138 (355)
T ss_dssp EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEE
T ss_pred EEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEe
Confidence 56799999999999987 478999999987432 23345677899999999 6999999999999999999999
Q ss_pred eccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCcccc
Q 044996 445 EFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM 524 (678)
Q Consensus 445 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 524 (678)
||+++|+|.+++.... .+++.++..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.+
T Consensus 139 e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~----~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 139 DYINGGELFTHLSQRE-----RFTEHEVQIYVGEIVLALEHLHKL----GIIYRDIKLENILLDSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp CCCCSCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred ecCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence 9999999999998653 489999999999999999999976 7999999999999999999999999999765
Q ss_pred Cccc-----cccccceeeCcccccc--CCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCcc
Q 044996 525 NQES-----AQELMIAYKSPEFLQL--GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNR 597 (678)
Q Consensus 525 ~~~~-----~~~~~~~y~aPE~~~~--~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 597 (678)
.... ...++..|+|||++.+ ..++.++|||||||++|||+||+.||.... ...................
T Consensus 210 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~----~~~~~~~~~~~~~~~~~~~ 285 (355)
T 1vzo_A 210 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDG----EKNSQAEISRRILKSEPPY 285 (355)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTT----SCCCHHHHHHHHHHCCCCC
T ss_pred ccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCC----ccchHHHHHHHHhccCCCC
Confidence 4321 2346788999999975 347899999999999999999999996321 1123333433333222111
Q ss_pred ccccchhhhcccCCHHHHHHHHHHHhhcCccccccCC-----CHHHHHHH
Q 044996 598 TEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRL-----DLKEAVEK 642 (678)
Q Consensus 598 ~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-----s~~ev~~~ 642 (678)
.......+.+++.+||+.||.+|| +++|+++.
T Consensus 286 -------------~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 286 -------------PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp -------------CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred -------------CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 111223467788899999999999 99998874
No 175
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.9e-38 Score=329.63 Aligned_cols=239 Identities=24% Similarity=0.316 Sum_probs=196.2
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccC-hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCC
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMN-NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRS 451 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gs 451 (678)
.+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+.++++++||||+++++++...+..++||||+++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 106 (303)
T 3a7i_A 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS 106 (303)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred hhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCc
Confidence 46799999999999976 468899999987543 3456789999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc----
Q 044996 452 LAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE---- 527 (678)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~---- 527 (678)
|.+++... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 107 L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 176 (303)
T 3a7i_A 107 ALDLLEPG------PLDETQIATILREILKGLDYLHSE----KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 176 (303)
T ss_dssp HHHHHTTS------CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCB
T ss_pred HHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC----CCccCCCChheEEECCCCCEEEeecccceecCcccccc
Confidence 99998642 589999999999999999999976 8999999999999999999999999999765433
Q ss_pred ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhc
Q 044996 528 SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMAD 607 (678)
Q Consensus 528 ~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~ 607 (678)
....++..|+|||++.+..++.++||||||+++|||++|+.||.. .............. .. .+.
T Consensus 177 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~--------~~~~~~~~~~~~~~-~~------~~~- 240 (303)
T 3a7i_A 177 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE--------LHPMKVLFLIPKNN-PP------TLE- 240 (303)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT--------SCHHHHHHHHHHSC-CC------CCC-
T ss_pred CccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCC--------cCHHHHHHHhhcCC-CC------CCc-
Confidence 223467889999999988999999999999999999999999862 12222222221111 10 010
Q ss_pred ccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHH
Q 044996 608 ERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEK 642 (678)
Q Consensus 608 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~ 642 (678)
. .....+.+++.+||+.||.+|||+.|+++.
T Consensus 241 ~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 241 G----NYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp S----SCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred c----ccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 1 112347788889999999999999999985
No 176
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=329.81 Aligned_cols=252 Identities=21% Similarity=0.280 Sum_probs=189.4
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccC-----hhhHHHHHHHHHHHhcc---CCCCccceeEEEEeCC-----c
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMN-----NVGREEFQEHMRRLGRL---RHPNLLPLVAYYYRKE-----E 439 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l---~H~niv~l~~~~~~~~-----~ 439 (678)
.+.||+|+||+||+|+. .+++.||+|++.... ......+.+|+++++++ +||||++++++|.... .
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~ 93 (308)
T 3g33_A 14 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIK 93 (308)
T ss_dssp EEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEE
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCcee
Confidence 46799999999999986 568899999987422 11234566777777666 4999999999998765 4
Q ss_pred eEEEEeccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecC
Q 044996 440 KLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYG 519 (678)
Q Consensus 440 ~~lv~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfG 519 (678)
.++||||+. |+|.+++..... ..+++.++..|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 94 ~~lv~e~~~-~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~----~ivH~Dlkp~Nil~~~~~~~kl~Dfg 165 (308)
T 3g33_A 94 VTLVFEHVD-QDLRTYLDKAPP---PGLPAETIKDLMRQFLRGLDFLHAN----CIVHRDLKPENILVTSGGTVKLADFG 165 (308)
T ss_dssp EEEEEECCC-CBHHHHHHTCCT---TCSCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCTTTEEECTTSCEEECSCS
T ss_pred EEEEehhhh-cCHHHHHhhccC---CCCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCCHHHEEEcCCCCEEEeeCc
Confidence 799999996 699999986532 2489999999999999999999977 79999999999999999999999999
Q ss_pred CccccCccc---cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhc-CC
Q 044996 520 LIPVMNQES---AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLAN-GD 595 (678)
Q Consensus 520 la~~~~~~~---~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~-~~ 595 (678)
+++...... ...++..|+|||++.+..++.++|||||||++|||++|+.||.. ....+........ +.
T Consensus 166 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~--------~~~~~~~~~i~~~~~~ 237 (308)
T 3g33_A 166 LARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCG--------NSEADQLGKIFDLIGL 237 (308)
T ss_dssp CTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCC--------SSHHHHHHHHHHHHCC
T ss_pred cccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHHHHHhCC
Confidence 998765432 23467889999999989999999999999999999999999962 1222222222211 00
Q ss_pred cccc-------ccchhhhcc-cC-----CHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 596 NRTE-------VFDKEMADE-RN-----SEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 596 ~~~~-------~~d~~l~~~-~~-----~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.... .....+... .. ..+....+.+++.+||+.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 238 PPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 0000 000000000 00 0012345678888999999999999999986
No 177
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=332.06 Aligned_cols=254 Identities=20% Similarity=0.287 Sum_probs=190.5
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC--hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN--NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKR 450 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~g 450 (678)
.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 87 (311)
T 4agu_A 8 IGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHT 87 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred eeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCc
Confidence 467999999999999875 58899999886533 334567889999999999999999999999999999999999999
Q ss_pred CHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc--
Q 044996 451 SLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES-- 528 (678)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~-- 528 (678)
+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 88 ~l~~~~~~~~-----~~~~~~~~~i~~~l~~~l~~lH~~----~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 158 (311)
T 4agu_A 88 VLHELDRYQR-----GVPEHLVKSITWQTLQAVNFCHKH----NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY 158 (311)
T ss_dssp HHHHHHHTSS-----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred hHHHHHhhhc-----CCCHHHHHHHHHHHHHHHHHHHHC----CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc
Confidence 9998886542 489999999999999999999976 89999999999999999999999999998765332
Q ss_pred --cccccceeeCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhc-----------C
Q 044996 529 --AQELMIAYKSPEFLQL-GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLAN-----------G 594 (678)
Q Consensus 529 --~~~~~~~y~aPE~~~~-~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~-----------~ 594 (678)
...++..|+|||++.+ ..++.++|||||||++|||++|+.||..... ......+...+.. .
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (311)
T 4agu_A 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSD-----VDQLYLIRKTLGDLIPRHQQVFSTN 233 (311)
T ss_dssp -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHCSCCHHHHHHHHTC
T ss_pred cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhcccccccccccccc
Confidence 2346788999999875 5789999999999999999999999962110 0111111111110 0
Q ss_pred Cccc--cccchhhhcc--cCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 595 DNRT--EVFDKEMADE--RNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 595 ~~~~--~~~d~~l~~~--~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.... ...++.-... .........+.+++.+||+.||.+|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 234 QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp GGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0000 0000000000 000012345778888999999999999999986
No 178
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.7e-38 Score=334.00 Aligned_cols=243 Identities=19% Similarity=0.222 Sum_probs=193.1
Q ss_pred cccCccCceeEEEEEec-CCceEEEEEecccC--hhhHHHHHHHHHHHhcc-CCCCccceeEEEEeCCceEEEEeccCCC
Q 044996 375 EILGSGCFGSSYKASLS-TGAMMVVKRFKQMN--NVGREEFQEHMRRLGRL-RHPNLLPLVAYYYRKEEKLLVHEFVPKR 450 (678)
Q Consensus 375 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~Ey~~~g 450 (678)
+.||+|+||.||+|... +++.||+|+++... ......+.+|+.++.++ +||||+++++++.+.+..++||||+++|
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~ 114 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG 114 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCC
Confidence 67999999999999865 68899999987532 33467899999999999 4699999999999999999999999999
Q ss_pred CHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecC---CCceEEeecCCccccCcc
Q 044996 451 SLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNE---SLEPVLADYGLIPVMNQE 527 (678)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~---~~~~kl~DfGla~~~~~~ 527 (678)
+|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 115 ~L~~~~~~~~~---~~~~~~~~~~i~~ql~~~L~~LH~~----givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 187 (327)
T 3lm5_A 115 EIFSLCLPELA---EMVSENDVIRLIKQILEGVYYLHQN----NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187 (327)
T ss_dssp EGGGGGSSCC----CCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred cHHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC----CeecCcCChHHEEEecCCCCCcEEEeeCccccccCCc
Confidence 99999865322 2589999999999999999999976 8999999999999998 789999999999876543
Q ss_pred c---cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchh
Q 044996 528 S---AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKE 604 (678)
Q Consensus 528 ~---~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 604 (678)
. ...++..|+|||++.+..++.++|||||||++|||++|+.||.. ....+............ ..+.
T Consensus 188 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~--------~~~~~~~~~i~~~~~~~---~~~~ 256 (327)
T 3lm5_A 188 CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVG--------EDNQETYLNISQVNVDY---SEET 256 (327)
T ss_dssp ------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHTCCCC---CTTT
T ss_pred cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCC--------CCchHHHHHHHhccccc---Cchh
Confidence 2 23468899999999989999999999999999999999999962 12222222222211111 0000
Q ss_pred hhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 605 MADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 605 l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
. ......+.+++.+||+.||.+|||+.|+++
T Consensus 257 ~------~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 257 F------SSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp T------TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred h------cccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 0 112334677888999999999999999986
No 179
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.4e-39 Score=337.91 Aligned_cols=265 Identities=18% Similarity=0.267 Sum_probs=192.8
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccChh-hHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNV-GREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRS 451 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gs 451 (678)
.+.||+|+||.||+|... +++.||+|+++..... ....+.+|++++++++||||+++++++...+..++||||++ |+
T Consensus 7 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~ 85 (324)
T 3mtl_A 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KD 85 (324)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-EE
T ss_pred EEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-cC
Confidence 467999999999999875 6889999998753322 12245679999999999999999999999999999999997 69
Q ss_pred HHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc---
Q 044996 452 LAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES--- 528 (678)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~--- 528 (678)
|.+++..... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 86 l~~~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~----~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 157 (324)
T 3mtl_A 86 LKQYLDDCGN----IINMHNVKLFLFQLLRGLAYCHRQ----KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY 157 (324)
T ss_dssp HHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHT----TEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred HHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHC----CccCCCcCHHHEEECCCCCEEEccCcccccccCCcccc
Confidence 9999876532 589999999999999999999976 89999999999999999999999999987654322
Q ss_pred -cccccceeeCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCc--cccccch-
Q 044996 529 -AQELMIAYKSPEFLQL-GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDN--RTEVFDK- 603 (678)
Q Consensus 529 -~~~~~~~y~aPE~~~~-~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~d~- 603 (678)
...++..|+|||++.+ ..++.++|||||||++|||++|+.||.... .......+...+..... .....+.
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~~~ 232 (324)
T 3mtl_A 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGST-----VEEQLHFIFRILGTPTEETWPGILSNE 232 (324)
T ss_dssp -----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCCCCTTTSTTGGGCH
T ss_pred ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHhCCCChHhchhhhcch
Confidence 2345788999999876 568999999999999999999999996211 01112222222211100 0000000
Q ss_pred hhhccc-----------CCHHHHHHHHHHHhhcCccccccCCCHHHHHH--HHHHhhccCCC
Q 044996 604 EMADER-----------NSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE--KIEEVKERDGD 652 (678)
Q Consensus 604 ~l~~~~-----------~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~--~L~~i~~~~~~ 652 (678)
...... ........+.+++.+||+.||.+|||+.|+++ .+.++.+....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~~ 294 (324)
T 3mtl_A 233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHK 294 (324)
T ss_dssp HHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCSTTSS
T ss_pred hhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhccccccc
Confidence 000000 00011245678888999999999999999988 46655544333
No 180
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.6e-38 Score=363.42 Aligned_cols=247 Identities=21% Similarity=0.310 Sum_probs=198.8
Q ss_pred hccccCccCceeEEEEEecC----CceEEEEEeccc-ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEecc
Q 044996 373 SAEILGSGCFGSSYKASLST----GAMMVVKRFKQM-NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFV 447 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~ 447 (678)
..+.||+|+||.||+|.+.. +..||+|+++.. .....+.|.+|+.++++++||||+++++++. .+..++||||+
T Consensus 394 i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~ 472 (656)
T 2j0j_A 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELC 472 (656)
T ss_dssp EEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred EeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcC
Confidence 45789999999999998642 457899988753 3344578999999999999999999999984 56789999999
Q ss_pred CCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc
Q 044996 448 PKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE 527 (678)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 527 (678)
++|+|.+++..... .+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 473 ~~g~L~~~l~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~----givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~ 544 (656)
T 2j0j_A 473 TLGELRSFLQVRKF----SLDLASLILYAYQLSTALAYLESK----RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 544 (656)
T ss_dssp TTCBHHHHHHHTTT----TCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC-
T ss_pred CCCcHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHhC----CccccccchHhEEEeCCCCEEEEecCCCeecCCC
Confidence 99999999986532 589999999999999999999976 8999999999999999999999999999876543
Q ss_pred c-----cccccceeeCccccccCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCcccccc
Q 044996 528 S-----AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVF 601 (678)
Q Consensus 528 ~-----~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 601 (678)
. ...++..|+|||++.+..++.++|||||||++|||++ |+.||.. ....+......... .. .
T Consensus 545 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~--------~~~~~~~~~i~~~~-~~-~-- 612 (656)
T 2j0j_A 545 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG--------VKNNDVIGRIENGE-RL-P-- 612 (656)
T ss_dssp ---------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT--------CCHHHHHHHHHHTC-CC-C--
T ss_pred cceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCC--------CCHHHHHHHHHcCC-CC-C--
Confidence 2 1234578999999998899999999999999999997 9999862 22223332222221 11 0
Q ss_pred chhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhc
Q 044996 602 DKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKE 648 (678)
Q Consensus 602 d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 648 (678)
........+.+++.+||+.||.+|||+.|+++.|+++.+
T Consensus 613 --------~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 613 --------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp --------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --------CCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 011223457788889999999999999999999999865
No 181
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=8.9e-39 Score=331.82 Aligned_cols=242 Identities=20% Similarity=0.291 Sum_probs=191.1
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCCH
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSL 452 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL 452 (678)
.+.||+|+||.||+|... ++..+++|.+........+.+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l 103 (302)
T 2j7t_A 24 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV 103 (302)
T ss_dssp EEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEH
T ss_pred cceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcH
Confidence 467999999999999875 5889999999876666678899999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCc----cc
Q 044996 453 AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQ----ES 528 (678)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~----~~ 528 (678)
.+++..... .+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||++..... ..
T Consensus 104 ~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 175 (302)
T 2j7t_A 104 DAIMLELDR----GLTEPQIQVVCRQMLEALNFLHSK----RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD 175 (302)
T ss_dssp HHHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC--
T ss_pred HHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHhcC----CcccCCCCHHHEEECCCCCEEEEECCCCccccccccccc
Confidence 999876432 589999999999999999999976 799999999999999999999999998754321 12
Q ss_pred cccccceeeCcccc-----ccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccch
Q 044996 529 AQELMIAYKSPEFL-----QLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDK 603 (678)
Q Consensus 529 ~~~~~~~y~aPE~~-----~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~ 603 (678)
...++..|+|||++ ....++.++||||||+++|||++|+.||.. .+............... ...+
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~--------~~~~~~~~~~~~~~~~~--~~~~ 245 (302)
T 2j7t_A 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE--------LNPMRVLLKIAKSDPPT--LLTP 245 (302)
T ss_dssp ---CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTT--------SCHHHHHHHHHHSCCCC--CSSG
T ss_pred cccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCcc--------CCHHHHHHHHhccCCcc--cCCc
Confidence 23467889999988 356789999999999999999999999862 22223333332221111 1000
Q ss_pred hhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 604 EMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 604 ~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
......+.+++.+||+.||.+|||+.|+++
T Consensus 246 --------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 246 --------SKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp --------GGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred --------cccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 111234777888999999999999999875
No 182
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.8e-38 Score=351.26 Aligned_cols=241 Identities=18% Similarity=0.247 Sum_probs=195.0
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC---hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN---NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.++||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..|+||||+++
T Consensus 190 ~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~g 269 (543)
T 3c4z_A 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNG 269 (543)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccC
Confidence 357999999999999874 68999999997532 23356788999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc-
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES- 528 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~- 528 (678)
|+|.+++..... ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.+....
T Consensus 270 g~L~~~l~~~~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~----gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~ 344 (543)
T 3c4z_A 270 GDIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLHQR----NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344 (543)
T ss_dssp CBHHHHHHTSST-TSCSCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred CCHHHHHHHhhc-ccccccHHHHHHHHHHHHHHHHHHHHc----CCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc
Confidence 999999976532 123599999999999999999999976 89999999999999999999999999998765432
Q ss_pred ---cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhh
Q 044996 529 ---AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEM 605 (678)
Q Consensus 529 ---~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l 605 (678)
...+|..|+|||++.+..++.++|||||||++|||+||+.||.... ............+......
T Consensus 345 ~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~----~~~~~~~~~~~i~~~~~~~-------- 412 (543)
T 3c4z_A 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG----EKVENKELKQRVLEQAVTY-------- 412 (543)
T ss_dssp CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTT----CCCCHHHHHHHHHHCCCCC--------
T ss_pred ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCc----cchhHHHHHHHHhhcccCC--------
Confidence 2357889999999999899999999999999999999999997321 1123333444333322111
Q ss_pred hcccCCHHHHHHHHHHHhhcCccccccCCCH
Q 044996 606 ADERNSEGEMVKLLKIGLACCEEEVEKRLDL 636 (678)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~ 636 (678)
+......+.+++.+||+.||.+||++
T Consensus 413 -----p~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 413 -----PDKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp -----CTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred -----CcccCHHHHHHHHHhccCCHhHCCCC
Confidence 11122346677889999999999976
No 183
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=328.35 Aligned_cols=243 Identities=23% Similarity=0.310 Sum_probs=192.1
Q ss_pred cccCccCceeEEEEEe-cCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCCHH
Q 044996 375 EILGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSLA 453 (678)
Q Consensus 375 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL~ 453 (678)
.+||+|+||.||+|.. .++..||+|.+........+.+.+|+.++++++||||+++++++...+..++||||+++++|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence 4799999999999986 567899999998766666788999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecC-CCceEEeecCCccccCcc----c
Q 044996 454 VNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNE-SLEPVLADYGLIPVMNQE----S 528 (678)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~-~~~~kl~DfGla~~~~~~----~ 528 (678)
+++..... ...+++..+..++.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+++..... .
T Consensus 108 ~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~ 181 (295)
T 2clq_A 108 ALLRSKWG--PLKDNEQTIGFYTKQILEGLKYLHDN----QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE 181 (295)
T ss_dssp HHHHHTTC--CCTTCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----C
T ss_pred HHHHhhcc--CCCccHHHHHHHHHHHHHHHHHHHhC----CEEccCCChhhEEEECCCCCEEEeecccccccCCCCCccc
Confidence 99986532 22467889999999999999999976 8999999999999997 899999999999766432 2
Q ss_pred cccccceeeCccccccCC--CCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhh
Q 044996 529 AQELMIAYKSPEFLQLGR--ITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMA 606 (678)
Q Consensus 529 ~~~~~~~y~aPE~~~~~~--~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~ 606 (678)
...++..|+|||++.+.. ++.++||||||+++|||++|+.||..... ............. .+.+
T Consensus 182 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~~~~~-------~~~~- 247 (295)
T 2clq_A 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE------PQAAMFKVGMFKV-------HPEI- 247 (295)
T ss_dssp CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSS------HHHHHHHHHHHCC-------CCCC-
T ss_pred ccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCc------hhHHHHhhccccc-------cccc-
Confidence 334678899999987643 88999999999999999999999963210 1111111111110 0111
Q ss_pred cccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 607 DERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 607 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.......+.+++.+||+.||++||++.|+++
T Consensus 248 ----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 248 ----PESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp ----CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ----cccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1112335677888999999999999999975
No 184
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.7e-38 Score=338.48 Aligned_cols=190 Identities=25% Similarity=0.351 Sum_probs=168.0
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEeccc-ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQM-NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRS 451 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gs 451 (678)
.+.||+|+||.||+|... ++..||+|++... .....+.+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 38 ~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 117 (360)
T 3eqc_A 38 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS 117 (360)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCB
T ss_pred eeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCC
Confidence 467999999999999875 6889999998754 34456789999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc--cc
Q 044996 452 LAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE--SA 529 (678)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~--~~ 529 (678)
|.+++.... .+++..+..++.+++.||+|||+.+ +|+||||||+|||++.++.+||+|||+++..... ..
T Consensus 118 L~~~l~~~~-----~~~~~~~~~i~~~i~~~l~~lh~~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 189 (360)
T 3eqc_A 118 LDQVLKKAG-----RIPEQILGKVSIAVIKGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 189 (360)
T ss_dssp HHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHHH---CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC---
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHhC---CEEcCCccHHHEEECCCCCEEEEECCCCcccccccccC
Confidence 999997653 4899999999999999999999742 6999999999999999999999999998655332 23
Q ss_pred ccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCcc
Q 044996 530 QELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPAN 571 (678)
Q Consensus 530 ~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~ 571 (678)
..++..|+|||++.+..++.++|||||||++|||+||+.||.
T Consensus 190 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 231 (360)
T 3eqc_A 190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP 231 (360)
T ss_dssp -CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSS
T ss_pred CCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 356788999999999899999999999999999999999996
No 185
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.3e-38 Score=335.10 Aligned_cols=249 Identities=18% Similarity=0.234 Sum_probs=183.7
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccCh--hhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCC
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMNN--VGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKR 450 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~g 450 (678)
.+.||+|+||+||+|.. .+++.||||+++.... ...+.+.+|++++++++||||+++++++.+.+..++||||++ |
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 117 (329)
T 3gbz_A 39 ITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-N 117 (329)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred EEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC-C
Confidence 46799999999999975 4788999999975432 234568899999999999999999999999999999999997 5
Q ss_pred CHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEe-----cCCCceEEeecCCccccC
Q 044996 451 SLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLL-----NESLEPVLADYGLIPVMN 525 (678)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl-----~~~~~~kl~DfGla~~~~ 525 (678)
+|.+++.... .+++..+..|+.||+.||+|||+. +|+||||||+|||+ ++++.+||+|||+++...
T Consensus 118 ~L~~~~~~~~-----~~~~~~~~~i~~ql~~~l~~LH~~----~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~ 188 (329)
T 3gbz_A 118 DLKKYMDKNP-----DVSMRVIKSFLYQLINGVNFCHSR----RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188 (329)
T ss_dssp EHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred CHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhC----CEECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence 9999997653 489999999999999999999976 89999999999999 455669999999997654
Q ss_pred cc----ccccccceeeCccccccC-CCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhc-CCccc-
Q 044996 526 QE----SAQELMIAYKSPEFLQLG-RITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLAN-GDNRT- 598 (678)
Q Consensus 526 ~~----~~~~~~~~y~aPE~~~~~-~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~- 598 (678)
.. ....++..|+|||++.+. .++.++|||||||++|||++|+.||.. ....+.+...... +....
T Consensus 189 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~--------~~~~~~~~~~~~~~~~~~~~ 260 (329)
T 3gbz_A 189 IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPG--------DSEIDQLFKIFEVLGLPDDT 260 (329)
T ss_dssp -----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHHHCCCCTT
T ss_pred CcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCC--------CCHHHHHHHHHHHhCCCchh
Confidence 32 223457889999999764 489999999999999999999999962 1112222222111 00000
Q ss_pred ----------------cccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 599 ----------------EVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 599 ----------------~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
+.....+... ........+.+++.+||+.||.+|||+.|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 261 TWPGVTALPDWKQSFPKFRGKTLKRV-LGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TSTTGGGSTTCCTTCCCCCCCCHHHH-HGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhhhccccHhhh-cccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0000000000 00001245678888999999999999999985
No 186
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-38 Score=338.49 Aligned_cols=252 Identities=23% Similarity=0.331 Sum_probs=188.5
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEeccc--ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCC------ceEEEE
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQM--NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKE------EKLLVH 444 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------~~~lv~ 444 (678)
.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++++++||||+++++++...+ ..|+||
T Consensus 30 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~ 109 (367)
T 1cm8_A 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVM 109 (367)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEE
T ss_pred eEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEE
Confidence 46799999999999986 56899999998642 3344677899999999999999999999997653 469999
Q ss_pred eccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCcccc
Q 044996 445 EFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM 524 (678)
Q Consensus 445 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 524 (678)
||+ +++|.+++... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 110 e~~-~~~L~~~~~~~------~l~~~~~~~~~~qi~~~L~~LH~~----~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 110 PFM-GTDLGKLMKHE------KLGEDRIQFLVYQMLKGLRYIHAA----GIIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp ECC-SEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred ecC-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC----CccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 999 88999998753 489999999999999999999976 8999999999999999999999999999876
Q ss_pred Ccc-ccccccceeeCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhc-CCcccccc
Q 044996 525 NQE-SAQELMIAYKSPEFLQL-GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLAN-GDNRTEVF 601 (678)
Q Consensus 525 ~~~-~~~~~~~~y~aPE~~~~-~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~ 601 (678)
... ....++..|+|||++.+ ..++.++|||||||++|||++|+.||.. .+..+.+...... +....+.+
T Consensus 179 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~--------~~~~~~l~~i~~~~g~~~~~~~ 250 (367)
T 1cm8_A 179 DSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG--------SDHLDQLKEIMKVTGTPPAEFV 250 (367)
T ss_dssp CSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHHHCCCCHHHH
T ss_pred ccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHHHHhcCCCCHHHH
Confidence 543 23456788999999876 6799999999999999999999999962 1222222222111 10000000
Q ss_pred -------------------chhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH--HHHHh
Q 044996 602 -------------------DKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE--KIEEV 646 (678)
Q Consensus 602 -------------------d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~--~L~~i 646 (678)
...+.. ........+.+++.+||+.||.+|||+.|+++ .++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~ 314 (367)
T 1cm8_A 251 QRLQSDEAKNYMKGLPELEKKDFAS--ILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL 314 (367)
T ss_dssp HTCSCHHHHHHHHHSCCCCCCCGGG--TCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred HHhhhHHHHHHHHhCCCCCCCCHHH--HCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhh
Confidence 000000 00112345677888999999999999999988 35444
No 187
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.6e-38 Score=337.57 Aligned_cols=242 Identities=19% Similarity=0.293 Sum_probs=193.7
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccCh--------hhHHHHHHHHHHHhcc-CCCCccceeEEEEeCCceEEE
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNN--------VGREEFQEHMRRLGRL-RHPNLLPLVAYYYRKEEKLLV 443 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv 443 (678)
.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.++.++ +||||+++++++......++|
T Consensus 99 ~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 178 (365)
T 2y7j_A 99 KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV 178 (365)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEE
T ss_pred ceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEE
Confidence 478999999999999875 789999999875321 1245688999999999 799999999999999999999
Q ss_pred EeccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccc
Q 044996 444 HEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPV 523 (678)
Q Consensus 444 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~ 523 (678)
|||+++|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||+++++.+||+|||++..
T Consensus 179 ~e~~~g~~L~~~l~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~----gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~ 249 (365)
T 2y7j_A 179 FDLMRKGELFDYLTEKV-----ALSEKETRSIMRSLLEAVSFLHAN----NIVHRDLKPENILLDDNMQIRLSDFGFSCH 249 (365)
T ss_dssp ECCCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEeCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC----CeecCCCCHHHEEECCCCCEEEEecCcccc
Confidence 99999999999997543 589999999999999999999976 899999999999999999999999999877
Q ss_pred cCcc---ccccccceeeCcccccc------CCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcC
Q 044996 524 MNQE---SAQELMIAYKSPEFLQL------GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANG 594 (678)
Q Consensus 524 ~~~~---~~~~~~~~y~aPE~~~~------~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~ 594 (678)
+... ....++..|+|||++.+ ..++.++|||||||++|||+||+.||.. ..............
T Consensus 250 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~--------~~~~~~~~~i~~~~ 321 (365)
T 2y7j_A 250 LEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH--------RRQILMLRMIMEGQ 321 (365)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHTC
T ss_pred cCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCC--------CCHHHHHHHHHhCC
Confidence 6543 23346789999998863 3588999999999999999999999962 12222222222211
Q ss_pred CccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 595 DNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 595 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.. ...+.. .. ....+.+++.+||+.||++|||+.|+++
T Consensus 322 ~~---~~~~~~--~~----~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 322 YQ---FSSPEW--DD----RSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp CC---CCHHHH--SS----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CC---CCCccc--cc----CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11 111111 01 1234777888999999999999999986
No 188
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=9.3e-39 Score=337.65 Aligned_cols=241 Identities=18% Similarity=0.239 Sum_probs=190.1
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccChhhHHHHHHHHHHHhcc-CCCCccceeEEEEeCCceEEEEeccCCCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRL-RHPNLLPLVAYYYRKEEKLLVHEFVPKRS 451 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~Ey~~~gs 451 (678)
.+.||+|+||.||+|... +++.||+|.++.... .+.+|++++.++ +||||+++++++.+.+..|+||||+++|+
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~ 102 (342)
T 2qr7_A 27 KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGE 102 (342)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCc
Confidence 467999999999999864 688999999975432 345688888888 79999999999999999999999999999
Q ss_pred HHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCC----CceEEeecCCccccCcc
Q 044996 452 LAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNES----LEPVLADYGLIPVMNQE 527 (678)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~----~~~kl~DfGla~~~~~~ 527 (678)
|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+|||+.++ +.+||+|||+++.....
T Consensus 103 L~~~i~~~~-----~~~~~~~~~~~~qi~~al~~lH~~----givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~ 173 (342)
T 2qr7_A 103 LLDKILRQK-----FFSEREASAVLFTITKTVEYLHAQ----GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE 173 (342)
T ss_dssp HHHHHHTCT-----TCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCT
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCC
Confidence 999997543 589999999999999999999976 89999999999998543 35999999999866433
Q ss_pred c----cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccch
Q 044996 528 S----AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDK 603 (678)
Q Consensus 528 ~----~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~ 603 (678)
. ...++..|+|||++.+..++.++|||||||++|||++|+.||... ......+............ ..
T Consensus 174 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~-----~~~~~~~~~~~i~~~~~~~----~~ 244 (342)
T 2qr7_A 174 NGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANG-----PDDTPEEILARIGSGKFSL----SG 244 (342)
T ss_dssp TCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSS-----TTSCHHHHHHHHHHCCCCC----CS
T ss_pred CCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCC-----CcCCHHHHHHHHccCCccc----Cc
Confidence 2 234578899999998878999999999999999999999999621 1123333333333222111 00
Q ss_pred hhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 604 EMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 604 ~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.. .......+.+++.+||+.||++||++.|+++
T Consensus 245 ~~-----~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 245 GY-----WNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp TT-----TTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred cc-----cccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00 0112234677888999999999999999987
No 189
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=3.2e-38 Score=323.08 Aligned_cols=241 Identities=19% Similarity=0.270 Sum_probs=192.4
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC-hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN-NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRS 451 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gs 451 (678)
.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+.+..++||||+++++
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 91 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCc
Confidence 467999999999999875 68899999987432 3445789999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc----
Q 044996 452 LAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE---- 527 (678)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~---- 527 (678)
|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..+...
T Consensus 92 L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 162 (276)
T 2yex_A 92 LFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGI----GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (276)
T ss_dssp GGGGSBTTT-----BCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred HHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHhC----CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchh
Confidence 999986532 589999999999999999999976 8999999999999999999999999998765322
Q ss_pred --ccccccceeeCccccccCCC-CCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchh
Q 044996 528 --SAQELMIAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKE 604 (678)
Q Consensus 528 --~~~~~~~~y~aPE~~~~~~~-t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 604 (678)
....++..|+|||++.+..+ +.++||||||+++|||++|+.||...... ...+..| ....... . .
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~----~~~~~~~----~-~ 230 (276)
T 2yex_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS---CQEYSDW----KEKKTYL----N-P 230 (276)
T ss_dssp CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTT---SHHHHHH----HTTCTTS----T-T
T ss_pred cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchH---HHHHHHh----hhccccc----C-c
Confidence 22346788999999987665 78999999999999999999999732110 0111111 1111110 0 0
Q ss_pred hhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 605 MADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 605 l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
. ......+.+++.+||+.||.+|||+.|+++
T Consensus 231 ~------~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 231 W------KKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp G------GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred h------hhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 0 011234677888999999999999999875
No 190
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=5.5e-38 Score=348.21 Aligned_cols=247 Identities=20% Similarity=0.270 Sum_probs=197.5
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEeccc--ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQM--NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKR 450 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~g 450 (678)
.+.||+|+||+||+|... +++.||||++... .......+.+|++++++++|||||++++++.+....++||||+++|
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~ 106 (486)
T 3mwu_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106 (486)
T ss_dssp EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCC
Confidence 467999999999999874 7889999998642 2345678999999999999999999999999999999999999999
Q ss_pred CHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEec---CCCceEEeecCCccccCcc
Q 044996 451 SLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN---ESLEPVLADYGLIPVMNQE 527 (678)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~---~~~~~kl~DfGla~~~~~~ 527 (678)
+|.+++.... .+++..+..|+.||+.||.|||+. +|+||||||+|||++ .++.+||+|||+++.+...
T Consensus 107 ~L~~~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~----~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 177 (486)
T 3mwu_A 107 ELFDEIIKRK-----RFSEHDAARIIKQVFSGITYMHKH----NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (486)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred cHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence 9999887653 489999999999999999999976 899999999999995 5668999999999876543
Q ss_pred c---cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchh
Q 044996 528 S---AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKE 604 (678)
Q Consensus 528 ~---~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 604 (678)
. ...++..|+|||++.+ .++.++|||||||++|||++|+.||.. ....+............ . .+.
T Consensus 178 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~--------~~~~~~~~~i~~~~~~~-~--~~~ 245 (486)
T 3mwu_A 178 TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYG--------KNEYDILKRVETGKYAF-D--LPQ 245 (486)
T ss_dssp ----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHTCCCS-C--SGG
T ss_pred CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHHHhCCCCC-C--Ccc
Confidence 2 3357889999999875 699999999999999999999999962 22233333333222111 0 011
Q ss_pred hhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHH--HHHhh
Q 044996 605 MADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEK--IEEVK 647 (678)
Q Consensus 605 l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~--L~~i~ 647 (678)
.. .....+.+++.+||+.||.+|||+.|+++. +++..
T Consensus 246 ~~------~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~ 284 (486)
T 3mwu_A 246 WR------TISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS 284 (486)
T ss_dssp GG------GSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTC
T ss_pred cC------CCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCc
Confidence 10 112346778889999999999999999983 55443
No 191
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=3e-38 Score=350.30 Aligned_cols=246 Identities=21% Similarity=0.292 Sum_probs=198.2
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC---hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN---NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.++||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++|||||++++++.+.+..++||||+.+
T Consensus 31 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 110 (484)
T 3nyv_A 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 110 (484)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCC
Confidence 567999999999999875 78999999986432 34567899999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEe---cCCCceEEeecCCccccCc
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLL---NESLEPVLADYGLIPVMNQ 526 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl---~~~~~~kl~DfGla~~~~~ 526 (678)
|+|.+++.... .+++..+..|+.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.+..
T Consensus 111 ~~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~----~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 111 GELFDEIISRK-----RFSEVDAARIIRQVLSGITYMHKN----KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp CBHHHHHHTCS-----CCBHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 99999987543 589999999999999999999977 89999999999999 5678999999999976654
Q ss_pred cc---cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccch
Q 044996 527 ES---AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDK 603 (678)
Q Consensus 527 ~~---~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~ 603 (678)
.. ...++..|+|||++.+ .++.++|||||||++|||++|+.||.. ....+.+.......... . .+
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~--------~~~~~~~~~i~~~~~~~-~--~~ 249 (484)
T 3nyv_A 182 SKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNG--------ANEYDILKKVEKGKYTF-E--LP 249 (484)
T ss_dssp CCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHCCCCC-C--SG
T ss_pred ccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCC--------CCHHHHHHHHHcCCCCC-C--Cc
Confidence 32 2347889999999875 799999999999999999999999962 22233333333222111 0 01
Q ss_pred hhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH--HHHHh
Q 044996 604 EMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE--KIEEV 646 (678)
Q Consensus 604 ~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~--~L~~i 646 (678)
... .....+.+++.+||+.||.+|||+.|+++ .++..
T Consensus 250 ~~~------~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~ 288 (484)
T 3nyv_A 250 QWK------KVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTY 288 (484)
T ss_dssp GGG------GSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHH
T ss_pred ccc------cCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhccc
Confidence 111 11234677888999999999999999997 45544
No 192
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=6.4e-39 Score=343.28 Aligned_cols=247 Identities=17% Similarity=0.128 Sum_probs=175.9
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC---hhhHHHHHHHHHHHhcc--CCCCcccee-------EEEEeCC--
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN---NVGREEFQEHMRRLGRL--RHPNLLPLV-------AYYYRKE-- 438 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l--~H~niv~l~-------~~~~~~~-- 438 (678)
.+.||+|+||.||+|... +++.||||+++... ....+.+.+|+++++.+ +||||++++ +++...+
T Consensus 67 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~ 146 (371)
T 3q60_A 67 VEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQP 146 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSC
T ss_pred eeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCC
Confidence 467999999999999864 78899999998643 23456678885544444 699987754 5554332
Q ss_pred ---------------ceEEEEeccCCCCHHHHhhccCCCCCCCCChHHH------HHHHHHHHHHHHHHHHhCCCCCCcc
Q 044996 439 ---------------EKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSR------LKIVKGVAKGLQYLYRELPSLIAPH 497 (678)
Q Consensus 439 ---------------~~~lv~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~------~~i~~~ia~gL~yLH~~~~~~~ivH 497 (678)
..++|||||+ |+|.+++..... .+.+..+ +.++.||+.||+|||+. +|+|
T Consensus 147 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~----~ivH 217 (371)
T 3q60_A 147 PFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF----VYVFRGDEGILALHILTAQLIRLAANLQSK----GLVH 217 (371)
T ss_dssp SSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT----TEEE
T ss_pred CeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc----ccchhhhhhhhhHHHHHHHHHHHHHHHHHC----CCcc
Confidence 3799999998 899999986532 3566666 78889999999999976 8999
Q ss_pred cCCCCCCEEecCCCceEEeecCCccccCccc-cccccceeeCcccccc--CCCCCcchHHHHHHHHHHHHhCCCCccccc
Q 044996 498 GHIKSSNVLLNESLEPVLADYGLIPVMNQES-AQELMIAYKSPEFLQL--GRITKKTDVWSLGVLILEIMTGKFPANFLQ 574 (678)
Q Consensus 498 rdlk~~NILl~~~~~~kl~DfGla~~~~~~~-~~~~~~~y~aPE~~~~--~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~ 574 (678)
|||||+|||++.++.+||+|||+++...... ...++..|+|||++.+ ..++.++|||||||++|||+||+.||....
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~ 297 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVT 297 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCC
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcC
Confidence 9999999999999999999999998776554 4456689999999987 679999999999999999999999997432
Q ss_pred cCCCCCCChHHHHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 575 QGKKADGDLASWVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 575 ~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
..... .| ... .........+... ........+.+++.+||+.||++|||+.|+++
T Consensus 298 ~~~~~-----~~-----~~~-~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 298 PGIKG-----SW-----KRP-SLRVPGTDSLAFG-SCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TTCTT-----CC-----CBC-CTTSCCCCSCCCT-TSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred ccccc-----ch-----hhh-hhhhccccccchh-hccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 11100 00 000 0000000000000 00112345777888999999999999999975
No 193
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.3e-38 Score=333.49 Aligned_cols=251 Identities=21% Similarity=0.289 Sum_probs=189.7
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC--hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN--NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKR 450 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~g 450 (678)
.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||++++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 109 (331)
T 4aaa_A 30 LGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHT 109 (331)
T ss_dssp EEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred eeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcc
Confidence 467999999999999875 58899999986532 334567889999999999999999999999999999999999999
Q ss_pred CHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc---
Q 044996 451 SLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE--- 527 (678)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~--- 527 (678)
+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 110 ~l~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~----~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 180 (331)
T 4aaa_A 110 ILDDLELFPN-----GLDYQVVQKYLFQIINGIGFCHSH----NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV 180 (331)
T ss_dssp HHHHHHHSTT-----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred hHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHC----CEEccCcChheEEEcCCCcEEEEeCCCceeecCCccc
Confidence 9988765432 489999999999999999999977 8999999999999999999999999999765432
Q ss_pred -ccccccceeeCccccccC-CCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHH--------------
Q 044996 528 -SAQELMIAYKSPEFLQLG-RITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVL-------------- 591 (678)
Q Consensus 528 -~~~~~~~~y~aPE~~~~~-~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~-------------- 591 (678)
....++..|+|||++.+. .++.++|||||||++|||++|+.||.... -.+......
T Consensus 181 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 252 (331)
T 4aaa_A 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDS--------DIDQLYHIMMCLGNLIPRHQELF 252 (331)
T ss_dssp ---CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHHHHHCSCCHHHHHHH
T ss_pred cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCC--------cHHHHHHHHHHhCCCChhhhhHh
Confidence 223467889999999765 78999999999999999999999996211 111111111
Q ss_pred hcCCccccccchhhhcccC----CHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 592 ANGDNRTEVFDKEMADERN----SEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 592 ~~~~~~~~~~d~~l~~~~~----~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
...........+.+..... .......+.+++.+||+.||++|||+.|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 253 NKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp HHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred hhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 1100000000000000000 0012345788888999999999999999986
No 194
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.2e-38 Score=327.41 Aligned_cols=240 Identities=22% Similarity=0.302 Sum_probs=190.8
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCCH
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRSL 452 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL 452 (678)
.+.||+|+||.||+|... +++.||+|.+.... ..+.+.+|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 34 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 111 (314)
T 3com_A 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSV 111 (314)
T ss_dssp EEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred heeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCH
Confidence 467999999999999875 58899999987532 346789999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc----c
Q 044996 453 AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE----S 528 (678)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~----~ 528 (678)
.+++.... ..+++.++..++.||+.||.|||.. +++||||||+||+++.++.+||+|||++...... .
T Consensus 112 ~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 183 (314)
T 3com_A 112 SDIIRLRN----KTLTEDEIATILQSTLKGLEYLHFM----RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 183 (314)
T ss_dssp HHHHHHHT----CCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBC
T ss_pred HHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC----CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccC
Confidence 99997432 2589999999999999999999976 7999999999999999999999999999765432 2
Q ss_pred cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhcc
Q 044996 529 AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMADE 608 (678)
Q Consensus 529 ~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~ 608 (678)
...++..|+|||++.+..++.++||||||+++|||++|+.||... ............... ....+
T Consensus 184 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--------~~~~~~~~~~~~~~~--~~~~~----- 248 (314)
T 3com_A 184 TVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADI--------HPMRAIFMIPTNPPP--TFRKP----- 248 (314)
T ss_dssp CCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTS--------CHHHHHHHHHHSCCC--CCSSG-----
T ss_pred ccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCC--------ChHHHHHHHhcCCCc--ccCCc-----
Confidence 234678899999999889999999999999999999999999621 111211111111111 01001
Q ss_pred cCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 609 RNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 609 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
......+.+++.+||+.||.+|||+.++++
T Consensus 249 ---~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 249 ---ELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp ---GGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ---ccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 111235778888999999999999999987
No 195
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=8.9e-38 Score=340.55 Aligned_cols=189 Identities=20% Similarity=0.282 Sum_probs=164.8
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccChhhHHHHHHHHHHHhcc------CCCCccceeEEEEeCCceEEEEec
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRL------RHPNLLPLVAYYYRKEEKLLVHEF 446 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~H~niv~l~~~~~~~~~~~lv~Ey 446 (678)
.++||+|+||.||+|... +++.||||+++.. ....+.+.+|+++++.+ +|+||+++++++...+..++||||
T Consensus 102 ~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 180 (429)
T 3kvw_A 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFEL 180 (429)
T ss_dssp EEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECC
T ss_pred EEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEec
Confidence 467999999999999764 5889999998753 34456778888888877 577999999999999999999999
Q ss_pred cCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCc--eEEeecCCcccc
Q 044996 447 VPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLE--PVLADYGLIPVM 524 (678)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~--~kl~DfGla~~~ 524 (678)
+. ++|.+++..... ..+++..+..|+.||+.||+|||+. +|+||||||+|||++.++. +||+|||+++..
T Consensus 181 ~~-~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~----~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~ 252 (429)
T 3kvw_A 181 LS-MNLYELIKKNKF---QGFSLPLVRKFAHSILQCLDALHKN----RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYE 252 (429)
T ss_dssp CC-CBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHHH----TEECSCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred cC-CCHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHHC----CeecCCCCHHHeEEccCCCcceEEeecccceec
Confidence 95 699999986543 2489999999999999999999987 7999999999999999887 999999999765
Q ss_pred Ccc-ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCcc
Q 044996 525 NQE-SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPAN 571 (678)
Q Consensus 525 ~~~-~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~ 571 (678)
... ....++..|+|||++.+..++.++|||||||++|||+||+.||.
T Consensus 253 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~ 300 (429)
T 3kvw_A 253 HQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLP 300 (429)
T ss_dssp TCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCC
Confidence 543 23456788999999999999999999999999999999999996
No 196
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.1e-38 Score=330.96 Aligned_cols=251 Identities=23% Similarity=0.317 Sum_probs=177.4
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccC-hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCC
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMN-NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRS 451 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gs 451 (678)
.+.||+|+||.||+|.. .+++.||||++.... ....+++.+|+.++++++||||+++++++...+..++||||+++|+
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 99 (303)
T 2vwi_A 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGS 99 (303)
T ss_dssp EEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCB
T ss_pred hheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCc
Confidence 46799999999999975 468899999886532 3345678899999999999999999999999999999999999999
Q ss_pred HHHHhhccC---CCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc-
Q 044996 452 LAVNLHGHQ---ALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE- 527 (678)
Q Consensus 452 L~~~l~~~~---~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~- 527 (678)
|.+++.... ......+++..+..++.||+.||.|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 100 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 175 (303)
T 2vwi_A 100 VLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN----GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG 175 (303)
T ss_dssp HHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCSGGGEEECTTCCEEECCCHHHHHCC---
T ss_pred hHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC----CCCCCCCChhhEEEcCCCCEEEEeccchheeccCC
Confidence 999987421 11123589999999999999999999976 7999999999999999999999999998765432
Q ss_pred --------ccccccceeeCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCc-c
Q 044996 528 --------SAQELMIAYKSPEFLQL-GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDN-R 597 (678)
Q Consensus 528 --------~~~~~~~~y~aPE~~~~-~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~-~ 597 (678)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||.... .............. .
T Consensus 176 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~~~~~~~~~~ 247 (303)
T 2vwi_A 176 DITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP--------PMKVLMLTLQNDPPSL 247 (303)
T ss_dssp ------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSC--------GGGHHHHHHTSSCCCT
T ss_pred CccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCc--------hhhHHHHHhccCCCcc
Confidence 12246778999999875 568999999999999999999999997321 11111222222111 0
Q ss_pred -ccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 598 -TEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 598 -~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
....++.+. ......+.+++.+||+.||.+|||+.|+++
T Consensus 248 ~~~~~~~~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 248 ETGVQDKEML-----KKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp TC-----CCC-----CCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccccccchhh-----hhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 001111111 112235778888999999999999999986
No 197
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=4.4e-38 Score=349.64 Aligned_cols=246 Identities=22% Similarity=0.299 Sum_probs=193.1
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC--hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN--NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKR 450 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~g 450 (678)
.+.||+|+||+||+|+.. ++..+|+|++.... ......+.+|+.++++++|||||+++++|.+....++||||+++|
T Consensus 42 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 121 (494)
T 3lij_A 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGG 121 (494)
T ss_dssp EEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCC
Confidence 567999999999999875 67899999987532 334577899999999999999999999999999999999999999
Q ss_pred CHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecC---CCceEEeecCCccccCcc
Q 044996 451 SLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNE---SLEPVLADYGLIPVMNQE 527 (678)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~---~~~~kl~DfGla~~~~~~ 527 (678)
+|.+++.... .+++..+..|+.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+++.+...
T Consensus 122 ~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~----~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~ 192 (494)
T 3lij_A 122 ELFDEIIHRM-----KFNEVDAAVIIKQVLSGVTYLHKH----NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192 (494)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred cHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence 9999887653 489999999999999999999976 8999999999999976 455999999999876543
Q ss_pred ---ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchh
Q 044996 528 ---SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKE 604 (678)
Q Consensus 528 ---~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 604 (678)
....++..|+|||++. +.++.++|||||||++|||++|+.||.. ....+............ ..+.
T Consensus 193 ~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~--------~~~~~~~~~i~~~~~~~---~~~~ 260 (494)
T 3lij_A 193 KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGG--------QTDQEILRKVEKGKYTF---DSPE 260 (494)
T ss_dssp BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHTCCCC---CSGG
T ss_pred ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHHHhCCCCC---Cchh
Confidence 2334788999999986 5799999999999999999999999962 23333333333222111 1111
Q ss_pred hhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH--HHHHh
Q 044996 605 MADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE--KIEEV 646 (678)
Q Consensus 605 l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~--~L~~i 646 (678)
.. .....+.+++.+||+.||.+|||+.|+++ .+++.
T Consensus 261 ~~------~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 261 WK------NVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp GT------TSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred cc------cCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence 11 11234677888999999999999999986 35544
No 198
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=5e-38 Score=332.10 Aligned_cols=255 Identities=18% Similarity=0.281 Sum_probs=195.0
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccC-hhhHHHHHHHHHH-HhccCCCCccceeEEEEeCCceEEEEeccCCC
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMN-NVGREEFQEHMRR-LGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKR 450 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~-l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~g 450 (678)
.+.||+|+||.||+|.. .+++.||||+++... .....++..|+.+ ++.++||||+++++++...+..++||||+++
T Consensus 56 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~- 134 (340)
T 3an0_A 56 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT- 134 (340)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE-
T ss_pred eeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC-
Confidence 45799999999999986 578899999997542 3334556666665 7888999999999999999999999999974
Q ss_pred CHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc--
Q 044996 451 SLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES-- 528 (678)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~-- 528 (678)
+|.+++...... ...+++..+..|+.||+.||+|||+.+ +|+||||||+|||++.++.+||+|||+++......
T Consensus 135 ~L~~~l~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 210 (340)
T 3an0_A 135 SLDKFYKQVIDK-GQTIPEDILGKIAVSIVKALEHLHSKL---SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK 210 (340)
T ss_dssp EHHHHHHHHHHT-SCCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHHHH
T ss_pred cHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhcC---CeecCCCCHHHEEECCCCCEEEeeCCCceeccccccc
Confidence 999888742111 126999999999999999999999753 69999999999999999999999999987665432
Q ss_pred -cccccceeeCccccc----cCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccch
Q 044996 529 -AQELMIAYKSPEFLQ----LGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDK 603 (678)
Q Consensus 529 -~~~~~~~y~aPE~~~----~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~ 603 (678)
...++..|+|||++. ...++.++|||||||++|||+||+.||... ......+..........
T Consensus 211 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~-------~~~~~~~~~~~~~~~~~------ 277 (340)
T 3an0_A 211 TIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW-------GTPFQQLKQVVEEPSPQ------ 277 (340)
T ss_dssp HHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCC-------SCHHHHHHHHHHSCCCC------
T ss_pred ccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccc-------cchHHHHHHHhcCCCCC------
Confidence 235788999999964 347899999999999999999999999621 12222233333222111
Q ss_pred hhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH--HHHHhhccCC
Q 044996 604 EMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE--KIEEVKERDG 651 (678)
Q Consensus 604 ~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~--~L~~i~~~~~ 651 (678)
+... .....+.+++.+||+.||++|||+.|+++ .+........
T Consensus 278 -~~~~----~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~ 322 (340)
T 3an0_A 278 -LPAD----KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGT 322 (340)
T ss_dssp -CCGG----GSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHTTSCC
T ss_pred -CCcc----cCCHHHHHHHHHHccCCcccCcCHHHHhcCcCccccccccc
Confidence 1001 12235778888999999999999999998 5555444333
No 199
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=9.5e-38 Score=323.40 Aligned_cols=242 Identities=20% Similarity=0.246 Sum_probs=194.3
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC---------hhhHHHHHHHHHHHhccC-CCCccceeEEEEeCCceEE
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN---------NVGREEFQEHMRRLGRLR-HPNLLPLVAYYYRKEEKLL 442 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~l 442 (678)
.+.||+|+||.||+|... +++.||||.++... ....+.+.+|++++++++ ||||+++++++...+..++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~l 101 (298)
T 1phk_A 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFL 101 (298)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred eeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEE
Confidence 467999999999999874 68899999987532 123467889999999996 9999999999999999999
Q ss_pred EEeccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCcc
Q 044996 443 VHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIP 522 (678)
Q Consensus 443 v~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 522 (678)
||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +++||||||+||+++.++.+||+|||+++
T Consensus 102 v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 172 (298)
T 1phk_A 102 VFDLMKKGELFDYLTEKV-----TLSEKETRKIMRALLEVICALHKL----NIVHRDLKPENILLDDDMNIKLTDFGFSC 172 (298)
T ss_dssp EEECCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEeccCCCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCCcceEEEcCCCcEEEecccchh
Confidence 999999999999997643 589999999999999999999976 89999999999999999999999999997
Q ss_pred ccCccc---cccccceeeCccccc------cCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhc
Q 044996 523 VMNQES---AQELMIAYKSPEFLQ------LGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLAN 593 (678)
Q Consensus 523 ~~~~~~---~~~~~~~y~aPE~~~------~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~ 593 (678)
...... ...++..|+|||++. ...++.++||||||+++|||++|+.||.. .............
T Consensus 173 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~--------~~~~~~~~~~~~~ 244 (298)
T 1phk_A 173 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH--------RKQMLMLRMIMSG 244 (298)
T ss_dssp ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHT
T ss_pred hcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcC--------ccHHHHHHHHhcC
Confidence 765432 234678899999885 45689999999999999999999999862 2222333333322
Q ss_pred CCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 594 GDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 594 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.... ..+.. ......+.+++.+||+.||.+|||+.|+++
T Consensus 245 ~~~~---~~~~~------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 245 NYQF---GSPEW------DDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp CCCC---CTTTG------GGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred Cccc---Ccccc------cccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 2111 01111 112345778888999999999999999976
No 200
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-38 Score=334.95 Aligned_cols=252 Identities=21% Similarity=0.277 Sum_probs=189.7
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccChh-----hHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEecc
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNV-----GREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFV 447 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~ 447 (678)
.+.||+|+||.||+|... +++.||||++...... ..+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 94 (346)
T 1ua2_A 15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM 94 (346)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcC
Confidence 467999999999999874 5889999998743221 1246889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc
Q 044996 448 PKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE 527 (678)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 527 (678)
++ +|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+...
T Consensus 95 ~~-~l~~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 95 ET-DLEVIIKDNSL----VLTPSHIKAYMLMTLQGLEYLHQH----WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp SE-EHHHHHTTCCS----SCCSSHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred CC-CHHHHHHhcCc----CCCHHHHHHHHHHHHHHHHHHHHC----CEECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 75 89988875432 588999999999999999999976 7999999999999999999999999999876432
Q ss_pred ----ccccccceeeCccccccC-CCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhc-CCcccccc
Q 044996 528 ----SAQELMIAYKSPEFLQLG-RITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLAN-GDNRTEVF 601 (678)
Q Consensus 528 ----~~~~~~~~y~aPE~~~~~-~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~ 601 (678)
....++..|+|||++.+. .++.++|||||||++|||++|+.||.. ....+.+...+.. +....+..
T Consensus 166 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~--------~~~~~~~~~i~~~~~~~~~~~~ 237 (346)
T 1ua2_A 166 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPG--------DSDLDQLTRIFETLGTPTEEQW 237 (346)
T ss_dssp CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHHHCCCCTTTS
T ss_pred cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCC--------CCHHHHHHHHHHHcCCCChhhh
Confidence 223467889999998654 589999999999999999999999862 1222222222211 10000000
Q ss_pred -------ch----hhhccc---CCHHHHHHHHHHHhhcCccccccCCCHHHHHHH
Q 044996 602 -------DK----EMADER---NSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEK 642 (678)
Q Consensus 602 -------d~----~l~~~~---~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~ 642 (678)
+. ...... ........+.+++.+||+.||.+|||+.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 238 PDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp SSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00 000000 001123457888889999999999999999874
No 201
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.1e-37 Score=333.69 Aligned_cols=248 Identities=18% Similarity=0.242 Sum_probs=184.7
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEeccc--ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCC------ceEEEE
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQM--NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKE------EKLLVH 444 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------~~~lv~ 444 (678)
.+.||+|+||.||+|.. .+++.||||++... .....+.+.+|+.+++.++||||+++++++...+ ..++||
T Consensus 30 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~ 109 (371)
T 2xrw_A 30 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 109 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEE
T ss_pred eeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEE
Confidence 46799999999999976 46889999998753 3345577899999999999999999999997654 679999
Q ss_pred eccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCcccc
Q 044996 445 EFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM 524 (678)
Q Consensus 445 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 524 (678)
||++ |+|.+++.. .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 110 e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~~----~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 177 (371)
T 2xrw_A 110 ELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSA----GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 177 (371)
T ss_dssp ECCS-EEHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTTSCEEECCCCC----
T ss_pred EcCC-CCHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHHHC----CeecccCCHHHEEEcCCCCEEEEEeeccccc
Confidence 9996 578888852 488999999999999999999976 8999999999999999999999999999876
Q ss_pred Ccc---ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHh---------
Q 044996 525 NQE---SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLA--------- 592 (678)
Q Consensus 525 ~~~---~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~--------- 592 (678)
... ....++..|+|||++.+..++.++|||||||++|||++|+.||... +..+-....+.
T Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~--------~~~~~~~~i~~~~~~~~~~~ 249 (371)
T 2xrw_A 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT--------DHIDQWNKVIEQLGTPCPEF 249 (371)
T ss_dssp ------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHC-CCCCCHHH
T ss_pred ccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHHHhCCCCHHH
Confidence 543 2234678899999999889999999999999999999999999621 11111111111
Q ss_pred -------------cCCccc-cccchhhhcc---cC---CHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 593 -------------NGDNRT-EVFDKEMADE---RN---SEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 593 -------------~~~~~~-~~~d~~l~~~---~~---~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
...... ..++..+... .. .......+.+++.+||+.||.+|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 250 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 100000 0000000000 00 0122456788999999999999999999987
No 202
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=5.7e-38 Score=323.63 Aligned_cols=252 Identities=19% Similarity=0.276 Sum_probs=183.1
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccC-hh-hHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCC
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMN-NV-GREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKR 450 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~-~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~g 450 (678)
.+.||+|+||.||+|.. .+++.||+|+++... .. ..+.+.++...++.++||||+++++++.+.+..++||||++ |
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 90 (290)
T 3fme_A 12 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-T 90 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-E
T ss_pred HHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-c
Confidence 46799999999999986 578899999997542 22 23344555556888999999999999999999999999997 5
Q ss_pred CHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc--
Q 044996 451 SLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES-- 528 (678)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~-- 528 (678)
+|.+++...... ...+++..+..|+.|++.||+|||+.+ +|+||||||+|||++.++.+||+|||+++......
T Consensus 91 ~l~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 166 (290)
T 3fme_A 91 SLDKFYKQVIDK-GQTIPEDILGKIAVSIVKALEHLHSKL---SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAK 166 (290)
T ss_dssp EHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHHS---CCCCCCCSGGGCEECTTCCEEBCCC------------
T ss_pred chHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhcC---CeecCCCCHHHEEECCCCCEEEeecCCcccccccccc
Confidence 888887642211 126999999999999999999999763 69999999999999999999999999997765432
Q ss_pred -cccccceeeCcccc----ccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccch
Q 044996 529 -AQELMIAYKSPEFL----QLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDK 603 (678)
Q Consensus 529 -~~~~~~~y~aPE~~----~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~ 603 (678)
...++..|+|||++ ....++.++|||||||++|||+||+.||... ..-...+.......... .
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-------~~~~~~~~~~~~~~~~~--~--- 234 (290)
T 3fme_A 167 DIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW-------GTPFQQLKQVVEEPSPQ--L--- 234 (290)
T ss_dssp ---CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCC-------SCHHHHHHHHHHSCCCC--C---
T ss_pred cccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCcccc-------CchHHHHHHHhccCCCC--c---
Confidence 23467889999996 5567899999999999999999999999621 11222222222222111 0
Q ss_pred hhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH--HHHHhhc
Q 044996 604 EMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE--KIEEVKE 648 (678)
Q Consensus 604 ~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~--~L~~i~~ 648 (678)
... .....+.+++.+||+.||++|||+.|+++ .++....
T Consensus 235 --~~~----~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~~~ 275 (290)
T 3fme_A 235 --PAD----KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHES 275 (290)
T ss_dssp --CTT----TSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHH
T ss_pred --ccc----cCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccCcc
Confidence 001 12235778888999999999999999998 5555443
No 203
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=4.2e-38 Score=342.20 Aligned_cols=243 Identities=21% Similarity=0.270 Sum_probs=183.5
Q ss_pred hccccCccCceeEEEEEe-cCCceEEEEEecccC--------hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEE
Q 044996 373 SAEILGSGCFGSSYKASL-STGAMMVVKRFKQMN--------NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLV 443 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 443 (678)
..+.||+|+||.||+|.. .+++.||||++.... ......+.+|+++|++++|||||++++++. .+..++|
T Consensus 139 ~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~lv 217 (419)
T 3i6u_A 139 MSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIV 217 (419)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSEEEEE
T ss_pred EEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCceEEE
Confidence 356799999999999976 467899999987532 112235889999999999999999999975 4568999
Q ss_pred EeccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCC---CceEEeecCC
Q 044996 444 HEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNES---LEPVLADYGL 520 (678)
Q Consensus 444 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~---~~~kl~DfGl 520 (678)
|||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||++.+ +.+||+|||+
T Consensus 218 ~e~~~~g~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~----~ivHrDlkp~NIll~~~~~~~~~kl~DFG~ 288 (419)
T 3i6u_A 218 LELMEGGELFDKVVGNK-----RLKEATCKLYFYQMLLAVQYLHEN----GIIHRDLKPENVLLSSQEEDCLIKITDFGH 288 (419)
T ss_dssp EECCTTCBGGGGTSSSC-----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEESSSSSSCCEEECCSST
T ss_pred EEcCCCCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC----CccccCCChHhEEEecCCCcceEEEeeccc
Confidence 99999999999886542 589999999999999999999976 79999999999999754 4599999999
Q ss_pred ccccCccc---cccccceeeCcccccc---CCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcC
Q 044996 521 IPVMNQES---AQELMIAYKSPEFLQL---GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANG 594 (678)
Q Consensus 521 a~~~~~~~---~~~~~~~y~aPE~~~~---~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~ 594 (678)
++...... ...++..|+|||++.+ ..++.++|||||||++|||+||+.||.... ....+... +..+
T Consensus 289 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~----~~~~~~~~----i~~~ 360 (419)
T 3i6u_A 289 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR----TQVSLKDQ----ITSG 360 (419)
T ss_dssp TTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCS----SSCCHHHH----HHTT
T ss_pred ceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCc----chHHHHHH----HhcC
Confidence 98775442 2346789999999853 578899999999999999999999996321 11122221 1111
Q ss_pred CccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 595 DNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 595 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.. . ..+.... .....+.+++.+||+.||.+|||+.|+++
T Consensus 361 ~~--~-~~~~~~~-----~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 361 KY--N-FIPEVWA-----EVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp CC--C-CCHHHHT-----TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CC--C-CCchhhc-----ccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 11 0 0111111 11345778888999999999999999986
No 204
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.6e-38 Score=327.70 Aligned_cols=249 Identities=20% Similarity=0.265 Sum_probs=185.1
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEE--------------eCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYY--------------RKE 438 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~--------------~~~ 438 (678)
.+.||+|+||.||+|... +++.||+|++........+.+.+|++++++++||||+++++++. ...
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~ 95 (320)
T 2i6l_A 16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELN 95 (320)
T ss_dssp EEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCS
T ss_pred EEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccC
Confidence 467999999999999875 48899999998766667788999999999999999999999874 335
Q ss_pred ceEEEEeccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEec-CCCceEEee
Q 044996 439 EKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN-ESLEPVLAD 517 (678)
Q Consensus 439 ~~~lv~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~-~~~~~kl~D 517 (678)
..++||||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++ +++.+||+|
T Consensus 96 ~~~lv~e~~~-~~L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 96 SVYIVQEYME-TDLANVLEQG------PLLEEHARLFMYQLLRGLKYIHSA----NVLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp EEEEEEECCS-EEHHHHHTTC------CCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCSGGGEEEETTTTEEEECC
T ss_pred ceeEEeeccC-CCHHHHhhcC------CccHHHHHHHHHHHHHHHHHHHhC----CEecCCCCHHHEEEcCCCCeEEEcc
Confidence 7899999997 6999998642 589999999999999999999976 899999999999997 577999999
Q ss_pred cCCccccCcc-------ccccccceeeCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 044996 518 YGLIPVMNQE-------SAQELMIAYKSPEFLQL-GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNS 589 (678)
Q Consensus 518 fGla~~~~~~-------~~~~~~~~y~aPE~~~~-~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~ 589 (678)
||+++..... ....++..|+|||.+.. ..++.++|||||||++|||+||+.||.. ....+....
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~--------~~~~~~~~~ 236 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAG--------AHELEQMQL 236 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHH
T ss_pred CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCC--------CCHHHHHHH
Confidence 9999876432 12234677999998865 6789999999999999999999999972 122222222
Q ss_pred HHhcCCccc------------cccchhhhcccCC-----HHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 590 VLANGDNRT------------EVFDKEMADERNS-----EGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 590 ~~~~~~~~~------------~~~d~~l~~~~~~-----~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
......... ..+.......... ......+.+++.+||+.||.+|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 237 ILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 222111000 0000000000000 012345778888999999999999999987
No 205
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=4.6e-38 Score=346.27 Aligned_cols=184 Identities=18% Similarity=0.342 Sum_probs=147.9
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEeccc--ChhhHHHHHHHHHHHhccCCCCccceeEEEEeC-----CceEEEEe
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQM--NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRK-----EEKLLVHE 445 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~~~lv~E 445 (678)
.++||+|+||+||+|... +++.||||++... .....+.+.+|+++|++++|||||++++++... ...|+|||
T Consensus 58 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 137 (458)
T 3rp9_A 58 RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE 137 (458)
T ss_dssp CCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEC
T ss_pred eeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEe
Confidence 467999999999999764 6889999998653 344567899999999999999999999999543 46899999
Q ss_pred ccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccC
Q 044996 446 FVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMN 525 (678)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 525 (678)
|+ +|+|.+++.... .+++..+..|+.||+.||+|||+. +|+||||||+||||+.++.+||+|||+++...
T Consensus 138 ~~-~~~L~~~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~----~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 138 IA-DSDFKKLFRTPV-----YLTELHIKTLLYNLLVGVKYVHSA----GILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207 (458)
T ss_dssp CC-SEEHHHHHHSSC-----CCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred cc-ccchhhhcccCC-----CCCHHHHHHHHHHHHHHHHHHHhC----CcCCCCCChhhEEECCCCCEeecccccchhcc
Confidence 98 579999987542 589999999999999999999976 89999999999999999999999999998764
Q ss_pred cc-------------------------------ccccccceeeCcccc-ccCCCCCcchHHHHHHHHHHHHhCC
Q 044996 526 QE-------------------------------SAQELMIAYKSPEFL-QLGRITKKTDVWSLGVLILEIMTGK 567 (678)
Q Consensus 526 ~~-------------------------------~~~~~~~~y~aPE~~-~~~~~t~ksDvwS~Gvvl~el~tg~ 567 (678)
.. ....+|..|+|||++ ....++.++|||||||+||||+||.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~ 281 (458)
T 3rp9_A 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMI 281 (458)
T ss_dssp SCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTS
T ss_pred CccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhc
Confidence 21 112347789999976 4567999999999999999999943
No 206
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=8.2e-38 Score=324.06 Aligned_cols=252 Identities=20% Similarity=0.292 Sum_probs=190.4
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC--hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN--NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKR 450 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~g 450 (678)
.+.||+|+||.||+|... +++.||+|+++... ....+.+.+|++++++++||||+++++++...+..++||||+. |
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 86 (299)
T 2r3i_A 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-Q 86 (299)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred hhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-C
Confidence 467999999999999875 68899999987532 2234678899999999999999999999999999999999997 6
Q ss_pred CHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc---
Q 044996 451 SLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE--- 527 (678)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~--- 527 (678)
+|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~L~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 159 (299)
T 2r3i_A 87 DLKKFMDASAL---TGIPLPLIKSYLFQLLQGLAFCHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159 (299)
T ss_dssp EHHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC
T ss_pred CHHHHHHhhhc---cCCCHHHHHHHHHHHHHHHHHHHHC----CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccc
Confidence 99999976532 2588999999999999999999976 8999999999999999999999999998765432
Q ss_pred -ccccccceeeCccccccCC-CCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhc-CCccccc----
Q 044996 528 -SAQELMIAYKSPEFLQLGR-ITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLAN-GDNRTEV---- 600 (678)
Q Consensus 528 -~~~~~~~~y~aPE~~~~~~-~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~---- 600 (678)
....++..|+|||++.+.. ++.++|||||||++|||+||+.||.. ....+........ +......
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (299)
T 2r3i_A 160 YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPG--------DSEIDQLFRIFRTLGTPDEVVWPGV 231 (299)
T ss_dssp TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCC--------SSHHHHHHHHHHHHCCCCTTTSTTG
T ss_pred cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCC--------ccHHHHHHHHHHHhCCCchhhhhHh
Confidence 2234578899999997755 79999999999999999999999972 1112222222211 1000000
Q ss_pred -----cchhhhccc-C-----CHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 601 -----FDKEMADER-N-----SEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 601 -----~d~~l~~~~-~-----~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
..+.+.... . .......+.+++.+|++.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp GGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000000 0 0011245678888999999999999999987
No 207
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=9.9e-38 Score=331.38 Aligned_cols=254 Identities=20% Similarity=0.267 Sum_probs=188.8
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccC--hhhHHHHHHHHHHHhccCCCCccceeEEEEeC--------CceEE
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMN--NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRK--------EEKLL 442 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--------~~~~l 442 (678)
.+.||+|+||.||+|+. .+++.||+|++.... ......+.+|++++++++||||+++++++... +..++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~l 101 (351)
T 3mi9_A 22 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 101 (351)
T ss_dssp EEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEE
T ss_pred EEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEE
Confidence 46799999999999987 578899999886432 23346788999999999999999999999873 46899
Q ss_pred EEeccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCcc
Q 044996 443 VHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIP 522 (678)
Q Consensus 443 v~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 522 (678)
||||++ |+|.+.+..... .+++.++..|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 102 v~e~~~-~~l~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~LH~~----~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 102 VFDFCE-HDLAGLLSNVLV----KFTLSEIKRVMQMLLNGLYYIHRN----KILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp EEECCS-EEHHHHHHCTTS----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEeccC-CCHHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHHHC----CeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 999997 588888765432 589999999999999999999976 89999999999999999999999999997
Q ss_pred ccCcc--------ccccccceeeCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhc
Q 044996 523 VMNQE--------SAQELMIAYKSPEFLQL-GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLAN 593 (678)
Q Consensus 523 ~~~~~--------~~~~~~~~y~aPE~~~~-~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~ 593 (678)
.+... ....++..|+|||++.+ ..++.++|||||||++|||+||+.||.... .......+......
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~~~~ 247 (351)
T 3mi9_A 173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT-----EQHQLALISQLCGS 247 (351)
T ss_dssp ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCC
T ss_pred cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHhCC
Confidence 65421 12245788999998876 458999999999999999999999997211 01111111111111
Q ss_pred CCc--cccccchhh-------hcccCC-HHH------HHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 594 GDN--RTEVFDKEM-------ADERNS-EGE------MVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 594 ~~~--~~~~~d~~l-------~~~~~~-~~~------~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
... ....-+..+ ...... .+. ...+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 248 ITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp CCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 000 000000000 000000 001 234678888999999999999999987
No 208
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=6e-38 Score=334.48 Aligned_cols=251 Identities=18% Similarity=0.249 Sum_probs=185.1
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEecccC-----------hhhHHHHHHHHHHHhccCCCCccceeEEEEeC-----
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMN-----------NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRK----- 437 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-----------~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~----- 437 (678)
.+.||+|+||.||+|...++..||||++.... ....+.+.+|++++++++||||+++++++...
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 106 (362)
T 3pg1_A 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAM 106 (362)
T ss_dssp EEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTC
T ss_pred eEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCc
Confidence 46799999999999998889999999986422 12247899999999999999999999998653
Q ss_pred CceEEEEeccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEee
Q 044996 438 EEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLAD 517 (678)
Q Consensus 438 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~D 517 (678)
...++||||++ |+|.+++..... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|
T Consensus 107 ~~~~lv~e~~~-~~l~~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~Dlkp~NIl~~~~~~~kl~D 177 (362)
T 3pg1_A 107 HKLYLVTELMR-TDLAQVIHDQRI----VISPQHIQYFMYHILLGLHVLHEA----GVVHRDLHPGNILLADNNDITICD 177 (362)
T ss_dssp CEEEEEEECCS-EEHHHHHHCTTS----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTCCEEECC
T ss_pred ceEEEEEccCC-CCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHC----cCEecCCChHHEEEcCCCCEEEEe
Confidence 35799999997 689988875432 589999999999999999999987 799999999999999999999999
Q ss_pred cCCccccCccc---cccccceeeCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhc
Q 044996 518 YGLIPVMNQES---AQELMIAYKSPEFLQL-GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLAN 593 (678)
Q Consensus 518 fGla~~~~~~~---~~~~~~~y~aPE~~~~-~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~ 593 (678)
||+++...... ...++..|+|||++.+ ..++.++|||||||++|||++|+.||.. ....+........
T Consensus 178 fg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~--------~~~~~~~~~i~~~ 249 (362)
T 3pg1_A 178 FNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRG--------STFYNQLNKIVEV 249 (362)
T ss_dssp TTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCC--------SSHHHHHHHHHHH
T ss_pred cCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCC--------CCHHHHHHHHHHH
Confidence 99997554332 2345778999999876 6789999999999999999999999962 1222222222110
Q ss_pred CCcc--cc-----------ccchhhhccc------CCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 594 GDNR--TE-----------VFDKEMADER------NSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 594 ~~~~--~~-----------~~d~~l~~~~------~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.... .. .+...+.... ........+.+++.+||+.||.+|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 250 VGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 0000 00 0000000000 00011345778888999999999999999986
No 209
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.4e-37 Score=342.40 Aligned_cols=254 Identities=15% Similarity=0.178 Sum_probs=197.1
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccChhhHHHHHHHHHHHhccCCC-CccceeEEEEeCCceEEEEeccCCCC
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHP-NLLPLVAYYYRKEEKLLVHEFVPKRS 451 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~-niv~l~~~~~~~~~~~lv~Ey~~~gs 451 (678)
.++||+|+||.||+|.. .+++.||||++..... ..++.+|+++++.++|+ +|..+..++...+..+|||||+ +++
T Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~s 88 (483)
T 3sv0_A 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPS 88 (483)
T ss_dssp CCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCC
Confidence 46799999999999986 5688999998765332 34588999999999874 5556666667778899999999 999
Q ss_pred HHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEe---cCCCceEEeecCCccccCccc
Q 044996 452 LAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLL---NESLEPVLADYGLIPVMNQES 528 (678)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl---~~~~~~kl~DfGla~~~~~~~ 528 (678)
|.+++..... .+++.+++.|+.||+.||+|||.. +|+||||||+|||| ++++.+||+|||+++.+....
T Consensus 89 L~~ll~~~~~----~l~~~~~~~i~~qi~~aL~yLH~~----gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (483)
T 3sv0_A 89 LEDLFNFCSR----KLSLKTVLMLADQMINRVEFVHSK----SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTS 160 (483)
T ss_dssp HHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred HHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHHC----CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCc
Confidence 9999975432 599999999999999999999976 89999999999999 688999999999998665432
Q ss_pred -----------cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCcc
Q 044996 529 -----------AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNR 597 (678)
Q Consensus 529 -----------~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 597 (678)
...++..|+|||++.+..++.++|||||||+||||++|+.||..... ......+....... ..
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~-----~~~~~~~~~i~~~~-~~ 234 (483)
T 3sv0_A 161 THQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA-----GTKKQKYEKISEKK-VA 234 (483)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC-----SSHHHHHHHHHHHH-HH
T ss_pred cccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccc-----hhHHHHHHHHhhcc-cc
Confidence 33467889999999999999999999999999999999999973221 12222222221110 00
Q ss_pred ccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCC
Q 044996 598 TEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDG 651 (678)
Q Consensus 598 ~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~ 651 (678)
..++ .+.. . ....+.+++..||+.+|++||++.+|++.|+++.....
T Consensus 235 -~~~~-~l~~-~----~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~ 281 (483)
T 3sv0_A 235 -TSIE-ALCR-G----YPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREG 281 (483)
T ss_dssp -SCHH-HHHT-T----SCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred -ccHH-HHhc-C----CcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcC
Confidence 0000 1111 1 12457888889999999999999999999999865443
No 210
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=9.7e-38 Score=358.01 Aligned_cols=238 Identities=21% Similarity=0.267 Sum_probs=195.2
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEeccc---ChhhHHHHHHHHHHHhcc-CCCCccceeEEEEeCCceEEEEeccC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQM---NNVGREEFQEHMRRLGRL-RHPNLLPLVAYYYRKEEKLLVHEFVP 448 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~Ey~~ 448 (678)
.++||+|+||.||+|+.. +++.||||+++.. .....+.+..|.+++..+ +||||+++++++.+.+..||||||++
T Consensus 346 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~ 425 (674)
T 3pfq_A 346 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 425 (674)
T ss_dssp EEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCC
T ss_pred EEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcC
Confidence 568999999999999864 6788999998753 223456788899999988 79999999999999999999999999
Q ss_pred CCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc-
Q 044996 449 KRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE- 527 (678)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~- 527 (678)
+|+|.++++... .+++.++..|+.||+.||+|||+. +|+||||||+||||+.++.+||+|||+++.....
T Consensus 426 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~----gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~ 496 (674)
T 3pfq_A 426 GGDLMYHIQQVG-----RFKEPHAVFYAAEIAIGLFFLQSK----GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 496 (674)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----SEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC----CeEeccCChhhEEEcCCCcEEEeecceeeccccCC
Confidence 999999998653 489999999999999999999976 8999999999999999999999999999854322
Q ss_pred ---ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchh
Q 044996 528 ---SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKE 604 (678)
Q Consensus 528 ---~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 604 (678)
....+|..|+|||++.+..|+.++|||||||+||||++|+.||. ..+..+....++......
T Consensus 497 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~--------~~~~~~~~~~i~~~~~~~------- 561 (674)
T 3pfq_A 497 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE--------GEDEDELFQSIMEHNVAY------- 561 (674)
T ss_dssp CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSC--------CSSHHHHHHHHHSSCCCC-------
T ss_pred cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCC--------CCCHHHHHHHHHhCCCCC-------
Confidence 23347889999999999999999999999999999999999997 223344444444332111
Q ss_pred hhcccCCHHHHHHHHHHHhhcCccccccCCCH-----HHHHH
Q 044996 605 MADERNSEGEMVKLLKIGLACCEEEVEKRLDL-----KEAVE 641 (678)
Q Consensus 605 l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~-----~ev~~ 641 (678)
+......+.+++.+||+.||.+||++ +||.+
T Consensus 562 ------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 562 ------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp ------CTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred ------CccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 11122346777789999999999997 56653
No 211
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=333.57 Aligned_cols=247 Identities=19% Similarity=0.300 Sum_probs=190.0
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEecccC--hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCCC
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMN--NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKRS 451 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~gs 451 (678)
.+.||+|+||.||+|.... .+++|+++... ....+.|.+|+.++++++||||+++++++...+..++||||+++++
T Consensus 38 ~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~ 115 (319)
T 2y4i_B 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRT 115 (319)
T ss_dssp CCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEE
T ss_pred eeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCc
Confidence 4679999999999998754 48899887432 2334567889999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcc----
Q 044996 452 LAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQE---- 527 (678)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~---- 527 (678)
|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++.....
T Consensus 116 L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~----~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~ 186 (319)
T 2y4i_B 116 LYSVVRDAK----IVLDVNKTRQIAQEIVKGMGYLHAK----GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGR 186 (319)
T ss_dssp HHHHTTSSC----CCCCSHHHHHHHHHHHHHHHHHHHT----TCCCCCCCSTTEEEC---CCEECCCSCCC---------
T ss_pred HHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC----CccccCCChhhEEEe-CCCEEEeecCCccccccccccc
Confidence 999997643 2589999999999999999999976 899999999999998 679999999998754321
Q ss_pred -----ccccccceeeCcccccc---------CCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhc
Q 044996 528 -----SAQELMIAYKSPEFLQL---------GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLAN 593 (678)
Q Consensus 528 -----~~~~~~~~y~aPE~~~~---------~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~ 593 (678)
....++..|+|||++.. ..++.++|||||||++|||++|+.||.. .............
T Consensus 187 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~--------~~~~~~~~~~~~~ 258 (319)
T 2y4i_B 187 REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKT--------QPAEAIIWQMGTG 258 (319)
T ss_dssp -CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSS--------CCHHHHHHHHHTT
T ss_pred cccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHhccC
Confidence 12236788999999864 4578999999999999999999999962 2222222222211
Q ss_pred CCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccC
Q 044996 594 GDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERD 650 (678)
Q Consensus 594 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~ 650 (678)
. .. .+.... ....+.+++.+||+.||.+|||+.|+++.|+++....
T Consensus 259 ~-~~------~~~~~~----~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 259 M-KP------NLSQIG----MGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp C-CC------CCCCSS----CCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred C-CC------CCCcCC----CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 1 11 110101 1123678888999999999999999999999887654
No 212
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.9e-38 Score=340.46 Aligned_cols=191 Identities=21% Similarity=0.350 Sum_probs=151.0
Q ss_pred ccccCccCceeEEEEEec---CCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEe--CCceEEEEeccC
Q 044996 374 AEILGSGCFGSSYKASLS---TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR--KEEKLLVHEFVP 448 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~~~~lv~Ey~~ 448 (678)
+++||+|+||+||+|+.. ++..||||++.... ....+.+|+++|++++|||||++++++.. ....++||||+.
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~ 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence 568999999999999865 57889999987532 23568899999999999999999999965 567899999996
Q ss_pred CCCHHHHhhccCC----CCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEe----cCCCceEEeecCC
Q 044996 449 KRSLAVNLHGHQA----LGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLL----NESLEPVLADYGL 520 (678)
Q Consensus 449 ~gsL~~~l~~~~~----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl----~~~~~~kl~DfGl 520 (678)
|+|.+++..... .....+++..+..|+.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+
T Consensus 104 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~----~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 178 (405)
T 3rgf_A 104 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN----WVLHRDLKPANILVMGEGPERGRVKIADMGF 178 (405)
T ss_dssp -EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECCSSTTTTCEEECCTTC
T ss_pred -CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC----CEeCCCcCHHHeEEecCCCCCCcEEEEECCC
Confidence 588888763321 1112489999999999999999999976 79999999999999 7789999999999
Q ss_pred ccccCcc-------ccccccceeeCccccccC-CCCCcchHHHHHHHHHHHHhCCCCcc
Q 044996 521 IPVMNQE-------SAQELMIAYKSPEFLQLG-RITKKTDVWSLGVLILEIMTGKFPAN 571 (678)
Q Consensus 521 a~~~~~~-------~~~~~~~~y~aPE~~~~~-~~t~ksDvwS~Gvvl~el~tg~~P~~ 571 (678)
++.+... ....+|..|+|||++.+. .++.++|||||||++|||+||+.||.
T Consensus 179 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~ 237 (405)
T 3rgf_A 179 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 237 (405)
T ss_dssp CC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred ceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCC
Confidence 9876532 123457889999999874 58999999999999999999999996
No 213
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=4.8e-38 Score=333.26 Aligned_cols=253 Identities=15% Similarity=0.207 Sum_probs=194.7
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEecccChhh-----------------HHHHHHHHHHHhccCCCCccceeEEEEe
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVG-----------------REEFQEHMRRLGRLRHPNLLPLVAYYYR 436 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~e~~~l~~l~H~niv~l~~~~~~ 436 (678)
.+.||+|+||.||+|.. +++.||+|.+....... .+.+.+|++++++++||||+++++++.+
T Consensus 36 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 114 (348)
T 2pml_X 36 IRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITN 114 (348)
T ss_dssp EEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEES
T ss_pred EEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEee
Confidence 46799999999999998 89999999987432111 1789999999999999999999999999
Q ss_pred CCceEEEEeccCCCCHHHH------hhccCCCCCCCCChHHHHHHHHHHHHHHHHHHH-hCCCCCCcccCCCCCCEEecC
Q 044996 437 KEEKLLVHEFVPKRSLAVN------LHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYR-ELPSLIAPHGHIKSSNVLLNE 509 (678)
Q Consensus 437 ~~~~~lv~Ey~~~gsL~~~------l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~~ivHrdlk~~NILl~~ 509 (678)
.+..++||||+++|+|.++ +.... ...+++..+..++.||+.||+|||+ . +|+||||||+|||++.
T Consensus 115 ~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~----~i~H~dl~p~Nil~~~ 187 (348)
T 2pml_X 115 YDEVYIIYEYMENDSILKFDEYFFVLDKNY---TCFIPIQVIKCIIKSVLNSFSYIHNEK----NICHRDVKPSNILMDK 187 (348)
T ss_dssp SSEEEEEEECCTTCBSSEESSSEESSCSSS---CCCCCHHHHHHHHHHHHHHHHHHHHTS----CEECCCCCGGGEEECT
T ss_pred CCeEEEEEeccCCCcHHHHHHHhhhhhhcc---ccCCCHHHHHHHHHHHHHHHHHHhccC----CEeecCCChHhEEEcC
Confidence 9999999999999999998 44321 2369999999999999999999997 4 7999999999999999
Q ss_pred CCceEEeecCCccccCcc--ccccccceeeCccccccC-CCCC-cchHHHHHHHHHHHHhCCCCccccccCCCCCCChHH
Q 044996 510 SLEPVLADYGLIPVMNQE--SAQELMIAYKSPEFLQLG-RITK-KTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLAS 585 (678)
Q Consensus 510 ~~~~kl~DfGla~~~~~~--~~~~~~~~y~aPE~~~~~-~~t~-ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~ 585 (678)
++.+||+|||+++..... ....++..|+|||++.+. .++. ++|||||||++|||++|+.||... ....+
T Consensus 188 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-------~~~~~ 260 (348)
T 2pml_X 188 NGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLK-------ISLVE 260 (348)
T ss_dssp TSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCS-------SCSHH
T ss_pred CCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCC-------CcHHH
Confidence 999999999999775433 334567889999999876 6666 999999999999999999999721 11123
Q ss_pred HHHHHHhcCCcccc----ccchhhhc--ccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 586 WVNSVLANGDNRTE----VFDKEMAD--ERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 586 ~~~~~~~~~~~~~~----~~d~~l~~--~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.............. ...+.... ..........+.+++.+||+.||.+|||+.|+++
T Consensus 261 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 261 LFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 33322222111100 00000000 0000112345778888999999999999999987
No 214
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.1e-37 Score=347.34 Aligned_cols=246 Identities=23% Similarity=0.277 Sum_probs=194.5
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccCh-------------hhHHHHHHHHHHHhccCCCCccceeEEEEeCCc
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNN-------------VGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEE 439 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 439 (678)
.+.||+|+||+||+|... ++..+|+|++..... ...+.+.+|+.++++++|||||+++++|.+...
T Consensus 41 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 120 (504)
T 3q5i_A 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKY 120 (504)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred EeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 467999999999999875 578899999875321 235678999999999999999999999999999
Q ss_pred eEEEEeccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCC---ceEEe
Q 044996 440 KLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESL---EPVLA 516 (678)
Q Consensus 440 ~~lv~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~---~~kl~ 516 (678)
.++||||+++|+|.+++.... .+++..+..|+.||+.||+|||+. +|+||||||+|||++.++ .+||+
T Consensus 121 ~~lv~e~~~gg~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~----~ivH~Dlkp~Nil~~~~~~~~~~kl~ 191 (504)
T 3q5i_A 121 FYLVTEFYEGGELFEQIINRH-----KFDECDAANIMKQILSGICYLHKH----NIVHRDIKPENILLENKNSLLNIKIV 191 (504)
T ss_dssp EEEEEECCTTCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEESSTTCCSSEEEC
T ss_pred EEEEEecCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CeEeCCCcHHHEEEecCCCCccEEEE
Confidence 999999999999999987653 589999999999999999999976 899999999999998775 69999
Q ss_pred ecCCccccCcc---ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhc
Q 044996 517 DYGLIPVMNQE---SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLAN 593 (678)
Q Consensus 517 DfGla~~~~~~---~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~ 593 (678)
|||+++..... ....++..|+|||++. +.++.++|||||||++|||++|+.||.. ....+.+......
T Consensus 192 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~--------~~~~~~~~~i~~~ 262 (504)
T 3q5i_A 192 DFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGG--------QNDQDIIKKVEKG 262 (504)
T ss_dssp CCTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHC
T ss_pred ECCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHHHcC
Confidence 99999876543 2335788999999987 5799999999999999999999999962 2333333333322
Q ss_pred CCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH--HHHHh
Q 044996 594 GDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE--KIEEV 646 (678)
Q Consensus 594 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~--~L~~i 646 (678)
.... +..... .....+.+++.+||+.||.+|||+.|+++ .+++.
T Consensus 263 ~~~~----~~~~~~-----~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~ 308 (504)
T 3q5i_A 263 KYYF----DFNDWK-----NISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKY 308 (504)
T ss_dssp CCCC----CHHHHT-----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHT
T ss_pred CCCC----CccccC-----CCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhc
Confidence 2111 111000 11234677888999999999999999986 35443
No 215
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.6e-37 Score=326.66 Aligned_cols=183 Identities=22% Similarity=0.313 Sum_probs=161.3
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccChhhHHHHHHHHHHHhccC-CCCccceeEEEEe--CCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLR-HPNLLPLVAYYYR--KEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~--~~~~~lv~Ey~~~ 449 (678)
.+.||+|+||.||+|.. .+++.||||+++.. ..+.+.+|++++++++ ||||+++++++.. ....++||||+++
T Consensus 41 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 117 (330)
T 3nsz_A 41 VRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNN 117 (330)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCC
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCc
Confidence 46799999999999975 57889999998743 3567899999999997 9999999999987 5678999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCC-ceEEeecCCccccCccc
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESL-EPVLADYGLIPVMNQES 528 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~-~~kl~DfGla~~~~~~~ 528 (678)
++|.+++. .+++.++..++.||+.||+|||+. +|+||||||+|||++.++ .+||+|||+++......
T Consensus 118 ~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~ 185 (330)
T 3nsz_A 118 TDFKQLYQ--------TLTDYDIRFYMYEILKALDYCHSM----GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 185 (330)
T ss_dssp CCHHHHGG--------GCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred hhHHHHHH--------hCCHHHHHHHHHHHHHHHHHHHhC----CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC
Confidence 99999885 378899999999999999999976 899999999999999776 89999999998665432
Q ss_pred ---cccccceeeCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCcc
Q 044996 529 ---AQELMIAYKSPEFLQL-GRITKKTDVWSLGVLILEIMTGKFPAN 571 (678)
Q Consensus 529 ---~~~~~~~y~aPE~~~~-~~~t~ksDvwS~Gvvl~el~tg~~P~~ 571 (678)
...++..|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 186 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~ 232 (330)
T 3nsz_A 186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 232 (330)
T ss_dssp CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 3346778999999876 678999999999999999999999985
No 216
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=322.78 Aligned_cols=240 Identities=21% Similarity=0.273 Sum_probs=189.5
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccC----hhhHHHHHHHHHHHhccCCCCccceeEEEEe--CCceEEEEec
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMN----NVGREEFQEHMRRLGRLRHPNLLPLVAYYYR--KEEKLLVHEF 446 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~~~~lv~Ey 446 (678)
.+.||+|+||.||+|.. .++..+|+|.++... ....+.+.+|++++++++||||+++++++.. ....++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 89 (305)
T 2wtk_C 10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEY 89 (305)
T ss_dssp CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEEC
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehh
Confidence 46799999999999986 467899999987532 2345789999999999999999999999853 4578999999
Q ss_pred cCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCc
Q 044996 447 VPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQ 526 (678)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 526 (678)
++++ |.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 90 ~~~~-l~~~~~~~~~---~~~~~~~~~~~~~qi~~al~~LH~~----~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 161 (305)
T 2wtk_C 90 CVCG-MQEMLDSVPE---KRFPVCQAHGYFCQLIDGLEYLHSQ----GIVHKDIKPGNLLLTTGGTLKISALGVAEALHP 161 (305)
T ss_dssp CSEE-HHHHHHHSTT---CSCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred ccCC-HHHHHHhCcc---cccCHHHHHHHHHHHHHHHHHHHHC----CeeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence 9876 7777765432 2589999999999999999999976 899999999999999999999999999976542
Q ss_pred c------ccccccceeeCccccccCC--CCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccc
Q 044996 527 E------SAQELMIAYKSPEFLQLGR--ITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRT 598 (678)
Q Consensus 527 ~------~~~~~~~~y~aPE~~~~~~--~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 598 (678)
. ....++..|+|||++.+.. ++.++|||||||++|||++|+.||.. .................
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~--------~~~~~~~~~i~~~~~~~- 232 (305)
T 2wtk_C 162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG--------DNIYKLFENIGKGSYAI- 232 (305)
T ss_dssp TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCC--------SSHHHHHHHHHHCCCCC-
T ss_pred cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCC--------chHHHHHHHHhcCCCCC-
Confidence 2 2234678899999987643 37899999999999999999999962 23333333332221111
Q ss_pred cccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHH
Q 044996 599 EVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEK 642 (678)
Q Consensus 599 ~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~ 642 (678)
.......+.+++.+||+.||.+|||+.|+++.
T Consensus 233 ------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 233 ------------PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ------------CSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ------------CCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 01122346778889999999999999999973
No 217
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.3e-37 Score=337.85 Aligned_cols=188 Identities=21% Similarity=0.335 Sum_probs=160.4
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEeccc--ChhhHHHHHHHHHHHhccCCCCccceeEEEEeC-----CceEEEEe
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQM--NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRK-----EEKLLVHE 445 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~~~lv~E 445 (678)
.+.||+|+||.||+|.. .+++.||||+++.. .....+.+.+|+++|++++||||+++++++... ...|+|||
T Consensus 31 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e 110 (432)
T 3n9x_A 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLE 110 (432)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEE
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEe
Confidence 46799999999999986 46788999999753 344567899999999999999999999999766 56899999
Q ss_pred ccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccC
Q 044996 446 FVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMN 525 (678)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 525 (678)
|+. |+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 111 ~~~-~~L~~~~~~~~-----~l~~~~~~~i~~qil~aL~~LH~~----givHrDlkp~NILl~~~~~~kL~DFGla~~~~ 180 (432)
T 3n9x_A 111 IAD-SDLKKLFKTPI-----FLTEEHIKTILYNLLLGENFIHES----GIIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180 (432)
T ss_dssp CCS-EEHHHHHHSSC-----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred cCC-cCHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence 996 69999997542 589999999999999999999977 89999999999999999999999999998764
Q ss_pred cc--------------------------ccccccceeeCcccc-ccCCCCCcchHHHHHHHHHHHHhCCCCcc
Q 044996 526 QE--------------------------SAQELMIAYKSPEFL-QLGRITKKTDVWSLGVLILEIMTGKFPAN 571 (678)
Q Consensus 526 ~~--------------------------~~~~~~~~y~aPE~~-~~~~~t~ksDvwS~Gvvl~el~tg~~P~~ 571 (678)
.. ....+|..|+|||++ ....++.++|||||||++|||++|..||.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 181 SEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp ------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 32 223457889999986 55679999999999999999999766654
No 218
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=325.74 Aligned_cols=241 Identities=21% Similarity=0.320 Sum_probs=186.9
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccChhhHHHHHHHHHHHhcc-CCCCccceeEEEEe------CCceEEEEe
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRLGRL-RHPNLLPLVAYYYR------KEEKLLVHE 445 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~------~~~~~lv~E 445 (678)
.+.||+|+||.||+|+. .+++.||+|++.... ...+.+.+|+.+++++ +||||+++++++.. .+..++|||
T Consensus 29 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e 107 (326)
T 2x7f_A 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVME 107 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEE
T ss_pred EEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEE
Confidence 46799999999999987 478899999987542 3456889999999999 89999999999987 457899999
Q ss_pred ccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccC
Q 044996 446 FVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMN 525 (678)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 525 (678)
|+++|+|.+++..... ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++....
T Consensus 108 ~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~----~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 180 (326)
T 2x7f_A 108 FCGAGSVTDLIKNTKG---NTLKEEWIAYICREILRGLSHLHQH----KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 180 (326)
T ss_dssp CCTTEEHHHHHHHSGG---GCCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCSGGGEEECTTCCEEECCCTTTC---
T ss_pred cCCCCcHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHHHC----CccccCCcHHHEEEcCCCCEEEeeCcCceecC
Confidence 9999999999986532 2589999999999999999999976 79999999999999999999999999987654
Q ss_pred cc----ccccccceeeCccccc-----cCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCc
Q 044996 526 QE----SAQELMIAYKSPEFLQ-----LGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDN 596 (678)
Q Consensus 526 ~~----~~~~~~~~y~aPE~~~-----~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 596 (678)
.. ....++..|+|||++. ...++.++|||||||++|||++|+.||... ....-.........
T Consensus 181 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--------~~~~~~~~~~~~~~- 251 (326)
T 2x7f_A 181 RTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM--------HPMRALFLIPRNPA- 251 (326)
T ss_dssp ----------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTS--------CHHHHHHHHHHSCC-
T ss_pred cCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCC--------cHHHHHHHhhcCcc-
Confidence 32 2234678899999986 567899999999999999999999998621 11111111111111
Q ss_pred cccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 597 RTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 597 ~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
+.+.... ....+.+++.+||+.||.+||++.|+++
T Consensus 252 ------~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 252 ------PRLKSKK----WSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp ------CCCSCSC----SCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ------ccCCccc----cCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0110111 1235677888999999999999999987
No 219
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.5e-37 Score=331.56 Aligned_cols=249 Identities=20% Similarity=0.304 Sum_probs=174.5
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEeccc--ChhhHHHHHHHHHHHhccCCCCccceeEEEEeC------CceEEEE
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQM--NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRK------EEKLLVH 444 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------~~~~lv~ 444 (678)
.+.||+|+||.||+|.. .+++.||||++... .....+.+.+|++++++++||||+++++++... ...++|+
T Consensus 34 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~ 113 (367)
T 2fst_X 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113 (367)
T ss_dssp EEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEe
Confidence 46799999999999975 56889999998653 334567888999999999999999999999754 5679999
Q ss_pred eccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCcccc
Q 044996 445 EFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM 524 (678)
Q Consensus 445 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 524 (678)
||+ +++|.+++... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 114 e~~-~~~L~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~----givH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 114 HLM-GADLNNIVKCQ------KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp ECC-CEECC-----C------CCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTCCEEECC-------
T ss_pred ccc-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC----CeeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 999 78999888642 589999999999999999999976 8999999999999999999999999999876
Q ss_pred Ccc-ccccccceeeCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhc-CCcccccc
Q 044996 525 NQE-SAQELMIAYKSPEFLQL-GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLAN-GDNRTEVF 601 (678)
Q Consensus 525 ~~~-~~~~~~~~y~aPE~~~~-~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~ 601 (678)
... ....++..|+|||++.+ ..++.++|||||||++|||++|+.||.. .+..+.+...... +....+.+
T Consensus 183 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~--------~~~~~~l~~i~~~~g~p~~~~~ 254 (367)
T 2fst_X 183 ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--------TDHIDQLKLILRLVGTPGAELL 254 (367)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCC--------SSHHHHHHHHHHHHCSCCHHHH
T ss_pred cccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHHHHHhCCCCHHHH
Confidence 543 23456788999999876 6789999999999999999999999962 1222222222110 00000000
Q ss_pred c----h-------hhhcc-cCC-----HHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 602 D----K-------EMADE-RNS-----EGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 602 d----~-------~l~~~-~~~-----~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
. . .+... ... ......+.+++.+||+.||.+|||+.|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 255 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp TTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 0 0 00000 000 011234678888999999999999999987
No 220
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.8e-37 Score=334.68 Aligned_cols=258 Identities=21% Similarity=0.241 Sum_probs=193.6
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccChhhHHHHHHHHHHHhccC--------CCCccceeEEEE----eCCce
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLR--------HPNLLPLVAYYY----RKEEK 440 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------H~niv~l~~~~~----~~~~~ 440 (678)
.++||+|+||+||+|+. .+++.||||+++.. ....+.+.+|++++++++ |+||+++++++. .....
T Consensus 42 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~ 120 (397)
T 1wak_A 42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHI 120 (397)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEE
T ss_pred EEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceE
Confidence 46799999999999975 46789999998753 445677899999999985 788999999987 45578
Q ss_pred EEEEeccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCC---------
Q 044996 441 LLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESL--------- 511 (678)
Q Consensus 441 ~lv~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~--------- 511 (678)
++||||+ +|+|.+++..... ..+++..+..|+.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 121 ~lv~e~~-~~~l~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~lH~~~---givHrDikp~NIll~~~~~~~~~~~~~ 193 (397)
T 1wak_A 121 CMVFEVL-GHHLLKWIIKSNY---QGLPLPCVKKIIQQVLQGLDYLHTKC---RIIHTDIKPENILLSVNEQYIRRLAAE 193 (397)
T ss_dssp EEEECCC-CCBHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHHHTT---CEECCCCSGGGEEECCCHHHHHHHHHH
T ss_pred EEEEecc-CccHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHeeEeccchhhhhhhhh
Confidence 9999999 6677777665422 25899999999999999999999753 699999999999999775
Q ss_pred ----------------------------------------ceEEeecCCccccCcc-ccccccceeeCccccccCCCCCc
Q 044996 512 ----------------------------------------EPVLADYGLIPVMNQE-SAQELMIAYKSPEFLQLGRITKK 550 (678)
Q Consensus 512 ----------------------------------------~~kl~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~~~t~k 550 (678)
.+||+|||+++..... ....+|..|+|||++.+..++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 273 (397)
T 1wak_A 194 ATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTP 273 (397)
T ss_dssp HC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTH
T ss_pred hHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcH
Confidence 8999999999876543 23456889999999998899999
Q ss_pred chHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHH---Hhc--------CCccccccch----------------
Q 044996 551 TDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSV---LAN--------GDNRTEVFDK---------------- 603 (678)
Q Consensus 551 sDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~---~~~--------~~~~~~~~d~---------------- 603 (678)
+|||||||++|||+||+.||........ ..-...+... +.. +....+.++.
T Consensus 274 ~DiwslG~il~elltg~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (397)
T 1wak_A 274 ADIWSTACMAFELATGDYLFEPHSGEEY--TRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLF 351 (397)
T ss_dssp HHHHHHHHHHHHHHHSSCSCCCCCCSSS--CHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHH
T ss_pred HHHHHHHHHHHHHhhCCCCCCCCccccc--CchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchh
Confidence 9999999999999999999973221100 0001111111 100 0000000000
Q ss_pred --hhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 604 --EMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 604 --~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
..............+.+++.+||+.||++|||+.|+++
T Consensus 352 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 352 EVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred HhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 00011123456677899999999999999999999985
No 221
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=3.8e-37 Score=317.29 Aligned_cols=247 Identities=20% Similarity=0.261 Sum_probs=196.1
Q ss_pred hccccCccCceeEEEEEec-CCceEEEEEeccc--ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 373 SAEILGSGCFGSSYKASLS-TGAMMVVKRFKQM--NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
..+.||+|+||.||+|... +++.||+|++... .....+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 26 i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 105 (287)
T 2wei_A 26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTG 105 (287)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCC
Confidence 3567999999999999875 6889999998643 234567899999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCC---CceEEeecCCccccCc
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNES---LEPVLADYGLIPVMNQ 526 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~---~~~kl~DfGla~~~~~ 526 (678)
++|.+++.... .+++.++..++.||+.||.|||.. +++||||||+||+++.+ +.+||+|||+++....
T Consensus 106 ~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~----~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~ 176 (287)
T 2wei_A 106 GELFDEIIKRK-----RFSEHDAARIIKQVFSGITYMHKH----NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (287)
T ss_dssp CBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence 99999887543 489999999999999999999976 89999999999999754 4799999999876654
Q ss_pred cc---cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccch
Q 044996 527 ES---AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDK 603 (678)
Q Consensus 527 ~~---~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~ 603 (678)
.. ...++..|+|||.+.+ .++.++||||||+++|||++|+.||.. ....+............ . .+
T Consensus 177 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~--------~~~~~~~~~~~~~~~~~-~--~~ 244 (287)
T 2wei_A 177 NTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYG--------KNEYDILKRVETGKYAF-D--LP 244 (287)
T ss_dssp CSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHCCCCC-C--SG
T ss_pred CCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCC--------CCHHHHHHHHHcCCCCC-C--ch
Confidence 32 2235778999999875 589999999999999999999999862 22233333333221111 0 01
Q ss_pred hhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH--HHHHh
Q 044996 604 EMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE--KIEEV 646 (678)
Q Consensus 604 ~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~--~L~~i 646 (678)
.. . .....+.+++.+||+.||.+|||+.|+++ .+++.
T Consensus 245 ~~--~----~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 283 (287)
T 2wei_A 245 QW--R----TISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (287)
T ss_dssp GG--T----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred hh--h----hcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence 10 0 11234677888999999999999999998 44443
No 222
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2.9e-37 Score=325.38 Aligned_cols=253 Identities=18% Similarity=0.259 Sum_probs=194.7
Q ss_pred ccccCccCceeEEEEEe--cCCceEEEEEecccChhhHHHHHHHHHHHhccCCCC------ccceeEEEEeCCceEEEEe
Q 044996 374 AEILGSGCFGSSYKASL--STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPN------LLPLVAYYYRKEEKLLVHE 445 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~~~~~~~~~~~lv~E 445 (678)
.+.||+|+||.||+|.. .+++.||||+++.. ....+.+.+|++++++++|+| |+++++++...+..++|||
T Consensus 19 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e 97 (339)
T 1z57_A 19 VDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFE 97 (339)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEE
T ss_pred EEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEc
Confidence 46799999999999976 36789999998753 345577889999999887654 9999999999999999999
Q ss_pred ccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecC----------------
Q 044996 446 FVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNE---------------- 509 (678)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~---------------- 509 (678)
|+ +++|.+++..... ..+++.++..++.||+.||+|||+. +|+||||||+|||++.
T Consensus 98 ~~-~~~l~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~ 169 (339)
T 1z57_A 98 LL-GLSTYDFIKENGF---LPFRLDHIRKMAYQICKSVNFLHSN----KLTHTDLKPENILFVQSDYTEAYNPKIKRDER 169 (339)
T ss_dssp CC-CCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEESCCCEEEEEC----CEEE
T ss_pred CC-CCCHHHHHHhcCC---CCCcHHHHHHHHHHHHHHHHHHHHC----CCcCCCCCHHHEEEeccccccccCCccccccc
Confidence 99 8999999976532 2589999999999999999999976 8999999999999987
Q ss_pred ---CCceEEeecCCccccCcc-ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHH
Q 044996 510 ---SLEPVLADYGLIPVMNQE-SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLAS 585 (678)
Q Consensus 510 ---~~~~kl~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~ 585 (678)
++.+||+|||+++..... ....++..|+|||++.+..++.++|||||||++|||++|+.||..... .....
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~~ 244 (339)
T 1z57_A 170 TLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS-----KEHLA 244 (339)
T ss_dssp EESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH-----HHHHH
T ss_pred cccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh-----HHHHH
Confidence 678999999999865543 234568899999999988999999999999999999999999962110 01111
Q ss_pred HHHHHHhcC--------Ccccccc---------------------chhhhcccCCHHHHHHHHHHHhhcCccccccCCCH
Q 044996 586 WVNSVLANG--------DNRTEVF---------------------DKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDL 636 (678)
Q Consensus 586 ~~~~~~~~~--------~~~~~~~---------------------d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~ 636 (678)
.+......- ... ..+ .+..............+.+++.+||+.||.+|||+
T Consensus 245 ~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~ 323 (339)
T 1z57_A 245 MMERILGPLPKHMIQKTRKR-KYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITL 323 (339)
T ss_dssp HHHHHHCSCCHHHHHHCSCG-GGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred HHHHHhCCCCHHHHhhccch-hHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCH
Confidence 111111100 000 000 00000001123456678899999999999999999
Q ss_pred HHHHH
Q 044996 637 KEAVE 641 (678)
Q Consensus 637 ~ev~~ 641 (678)
.|+++
T Consensus 324 ~ell~ 328 (339)
T 1z57_A 324 REALK 328 (339)
T ss_dssp HHHTT
T ss_pred HHHhc
Confidence 99985
No 223
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.2e-37 Score=334.89 Aligned_cols=256 Identities=21% Similarity=0.257 Sum_probs=187.4
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeC---------------
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRK--------------- 437 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--------------- 437 (678)
.+.||+|+||.||+|.. .+++.||||++..... ...+|+++++.++|||||++++++...
T Consensus 12 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~ 87 (383)
T 3eb0_A 12 GKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHN 87 (383)
T ss_dssp EEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC---------------
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCcccccccccccccc
Confidence 46799999999999976 5789999999875422 234799999999999999999998543
Q ss_pred -----------------------CceEEEEeccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCC
Q 044996 438 -----------------------EEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLI 494 (678)
Q Consensus 438 -----------------------~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ 494 (678)
...++||||++ |+|.+.+...... ...+++..+..++.||+.||+|||+. +
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~----g 161 (383)
T 3eb0_A 88 KLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRS-GRSIPMNLISIYIYQLFRAVGFIHSL----G 161 (383)
T ss_dssp ----------------------CCEEEEEECCCS-EEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHTT----T
T ss_pred cccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC----c
Confidence 23789999997 6888877642211 12699999999999999999999965 8
Q ss_pred CcccCCCCCCEEec-CCCceEEeecCCccccCccc---cccccceeeCccccccC-CCCCcchHHHHHHHHHHHHhCCCC
Q 044996 495 APHGHIKSSNVLLN-ESLEPVLADYGLIPVMNQES---AQELMIAYKSPEFLQLG-RITKKTDVWSLGVLILEIMTGKFP 569 (678)
Q Consensus 495 ivHrdlk~~NILl~-~~~~~kl~DfGla~~~~~~~---~~~~~~~y~aPE~~~~~-~~t~ksDvwS~Gvvl~el~tg~~P 569 (678)
|+||||||+|||++ +++.+||+|||+++.+.... ...++..|+|||++.+. .++.++|||||||++|||++|+.|
T Consensus 162 i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~p 241 (383)
T 3eb0_A 162 ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPL 241 (383)
T ss_dssp EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCC
Confidence 99999999999998 68999999999998664332 33457789999998764 489999999999999999999999
Q ss_pred ccccccCCCCCCChHHHHHHHHh-cCCcc-----------ccc-----cchhhhcccCCHHHHHHHHHHHhhcCcccccc
Q 044996 570 ANFLQQGKKADGDLASWVNSVLA-NGDNR-----------TEV-----FDKEMADERNSEGEMVKLLKIGLACCEEEVEK 632 (678)
Q Consensus 570 ~~~~~~~~~~~~~l~~~~~~~~~-~~~~~-----------~~~-----~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~ 632 (678)
|... .-.+.+..... .+... .+. ........ ........+.+++.+||+.||.+
T Consensus 242 f~~~--------~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~ 312 (383)
T 3eb0_A 242 FSGE--------TSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKI-LPEGTPSLAIDLLEQILRYEPDL 312 (383)
T ss_dssp SCCS--------SHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHH-SCTTCCHHHHHHHHHHCCSSGGG
T ss_pred CCCC--------ChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhh-CCCCCCHHHHHHHHHHccCChhh
Confidence 9721 11111111111 00000 000 00000000 01112345778888999999999
Q ss_pred CCCHHHHHH--HHHHhhc
Q 044996 633 RLDLKEAVE--KIEEVKE 648 (678)
Q Consensus 633 RPs~~ev~~--~L~~i~~ 648 (678)
|||+.|+++ .++++..
T Consensus 313 R~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 313 RINPYEAMAHPFFDHLRN 330 (383)
T ss_dssp SCCHHHHHTSGGGHHHHH
T ss_pred CCCHHHHhcCHHHHHHHh
Confidence 999999985 4555544
No 224
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2.4e-37 Score=330.18 Aligned_cols=252 Identities=18% Similarity=0.276 Sum_probs=189.7
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC-hhhHHHHHHHHHHHhccCCCCccceeEEEEeC-----CceEEEEec
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN-NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRK-----EEKLLVHEF 446 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~~~lv~Ey 446 (678)
.+.||+|+||.||+|... ++..||||++.... ....+.+.+|++++.+++||||+++++++... ...++||||
T Consensus 32 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~ 111 (364)
T 3qyz_A 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 111 (364)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEEC
T ss_pred EEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcc
Confidence 467999999999999764 67889999997533 34457899999999999999999999999765 368999999
Q ss_pred cCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCc
Q 044996 447 VPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQ 526 (678)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 526 (678)
+. |+|.+++... .+++.++..|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 112 ~~-~~L~~~l~~~------~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 180 (364)
T 3qyz_A 112 ME-TDLYKLLKTQ------HLSNDHICYFLYQILRGLKYIHSA----NVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180 (364)
T ss_dssp CS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred cC-cCHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHC----CeecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence 96 6999998753 489999999999999999999976 899999999999999999999999999987654
Q ss_pred cc-------cccccceeeCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCcc-
Q 044996 527 ES-------AQELMIAYKSPEFLQL-GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNR- 597 (678)
Q Consensus 527 ~~-------~~~~~~~y~aPE~~~~-~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~- 597 (678)
.. ...++..|+|||++.+ ..++.++|||||||++|||++|+.||.... .......+...+......
T Consensus 181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~~~~~~~~~ 255 (364)
T 3qyz_A 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH-----YLDQLNHILGILGSPSQED 255 (364)
T ss_dssp GGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSS-----GGGHHHHHHHHHCSCCHHH
T ss_pred CCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCC-----hHHHHHHHHHHhCCCCHHH
Confidence 32 2246788999998754 458999999999999999999999996211 111111111111110000
Q ss_pred -ccccch-------hhhc-ccC-----CHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 598 -TEVFDK-------EMAD-ERN-----SEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 598 -~~~~d~-------~l~~-~~~-----~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
....+. .+.. ... .......+.+++.+||+.||.+|||+.|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000 0000 000 0011245778888999999999999999987
No 225
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=3.8e-37 Score=329.43 Aligned_cols=248 Identities=21% Similarity=0.299 Sum_probs=187.7
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEeccc--ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCce------EEEE
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQM--NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEK------LLVH 444 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~------~lv~ 444 (678)
.+.||+|+||.||+|.. .+++.||||++... .....+.+.+|+.++++++||||+++++++...+.. ++||
T Consensus 47 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 126 (371)
T 4exu_A 47 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 126 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEE
T ss_pred EeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEE
Confidence 46799999999999976 46889999999753 334467889999999999999999999999876654 9999
Q ss_pred eccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCcccc
Q 044996 445 EFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM 524 (678)
Q Consensus 445 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 524 (678)
||+. |+|.+++.. .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 127 e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 194 (371)
T 4exu_A 127 PFMQ-TDLQKIMGM-------EFSEEKIQYLVYQMLKGLKYIHSA----GVVHRDLKPGNLAVNEDCELKILDFGLARHA 194 (371)
T ss_dssp ECCC-EEHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTTCCEEECSTTCC---
T ss_pred cccc-ccHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHHC----CCcCCCcCHHHeEECCCCCEEEEecCccccc
Confidence 9997 688887742 489999999999999999999977 8999999999999999999999999999876
Q ss_pred Ccc-ccccccceeeCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcC-Ccccccc
Q 044996 525 NQE-SAQELMIAYKSPEFLQL-GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANG-DNRTEVF 601 (678)
Q Consensus 525 ~~~-~~~~~~~~y~aPE~~~~-~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~ 601 (678)
... ....++..|+|||++.+ ..++.++|||||||++|||++|+.||.. .+..+.+...+... ....+.+
T Consensus 195 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~--------~~~~~~~~~i~~~~~~~~~~~~ 266 (371)
T 4exu_A 195 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG--------KDYLDQLTQILKVTGVPGTEFV 266 (371)
T ss_dssp -----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCC--------SSHHHHHHHHHHHHCCCCHHHH
T ss_pred ccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCC--------CChHHHHHHHHHHhCCCcHHHH
Confidence 543 23356788999999876 6789999999999999999999999962 22222222222110 0000000
Q ss_pred c-----------hhhhccc-C-----CHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 602 D-----------KEMADER-N-----SEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 602 d-----------~~l~~~~-~-----~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
+ ..+.... . .......+.+++.+||+.||++|||+.|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 267 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp TTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 0 0000000 0 0012345778888999999999999999987
No 226
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.3e-37 Score=335.52 Aligned_cols=256 Identities=20% Similarity=0.281 Sum_probs=185.3
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCc------eEEEEecc
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEE------KLLVHEFV 447 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~------~~lv~Ey~ 447 (678)
.++||+|+||+||+|+...+..+|+|++..... ...+|+++++.++||||+++++++...+. .++||||+
T Consensus 45 ~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~ 120 (394)
T 4e7w_A 45 CKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV 120 (394)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECC
T ss_pred eEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeecc
Confidence 467999999999999987777799998865322 22369999999999999999999976443 78999999
Q ss_pred CCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEec-CCCceEEeecCCccccCc
Q 044996 448 PKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN-ESLEPVLADYGLIPVMNQ 526 (678)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~-~~~~~kl~DfGla~~~~~ 526 (678)
+++.+....+.... ...+++..+..++.||+.||+|||+. +|+||||||+|||++ .++.+||+|||+++.+..
T Consensus 121 ~~~l~~~~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~----~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~ 194 (394)
T 4e7w_A 121 PETVYRASRHYAKL--KQTMPMLLIKLYMYQLLRSLAYIHSI----GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA 194 (394)
T ss_dssp SEEHHHHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred CccHHHHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHC----CccCCCCCHHHEEEcCCCCcEEEeeCCCcccccC
Confidence 86544433322111 12589999999999999999999976 899999999999999 799999999999987643
Q ss_pred c---ccccccceeeCccccccC-CCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhc-CCcccc--
Q 044996 527 E---SAQELMIAYKSPEFLQLG-RITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLAN-GDNRTE-- 599 (678)
Q Consensus 527 ~---~~~~~~~~y~aPE~~~~~-~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~-- 599 (678)
. ....++..|+|||++.+. .++.++|||||||++|||++|+.||.. .+-.+.+...... +....+
T Consensus 195 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~--------~~~~~~l~~i~~~~g~p~~~~~ 266 (394)
T 4e7w_A 195 GEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPG--------ESGIDQLVEIIKVLGTPSREQI 266 (394)
T ss_dssp TCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHHHCCCCHHHH
T ss_pred CCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHHHHHhCCCCHHHH
Confidence 3 233467889999998764 589999999999999999999999962 1111111111110 000000
Q ss_pred -ccchhh--------hc----ccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHH--HHHhh
Q 044996 600 -VFDKEM--------AD----ERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEK--IEEVK 647 (678)
Q Consensus 600 -~~d~~l--------~~----~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~--L~~i~ 647 (678)
.+++.. .. ..........+.+++.+||+.||.+|||+.|+++. ++++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (394)
T 4e7w_A 267 KTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR 329 (394)
T ss_dssp HHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred HhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence 000000 00 00001123457888889999999999999999873 44443
No 227
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=4.1e-37 Score=318.94 Aligned_cols=240 Identities=18% Similarity=0.273 Sum_probs=185.2
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEe-------------CCc
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR-------------KEE 439 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~-------------~~~ 439 (678)
.+.||+|+||.||+|+. .+++.||||++... ....+.+.+|++++++++||||+++++++.+ .+.
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (303)
T 1zy4_A 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKST 89 (303)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEE
T ss_pred hheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCc
Confidence 46799999999999986 47889999998653 3456789999999999999999999999865 346
Q ss_pred eEEEEeccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecC
Q 044996 440 KLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYG 519 (678)
Q Consensus 440 ~~lv~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfG 519 (678)
.++||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~LH~~----~i~H~dlkp~Nil~~~~~~~kl~dfg 161 (303)
T 1zy4_A 90 LFIQMEYCENGTLYDLIHSENL----NQQRDEYWRLFRQILEALSYIHSQ----GIIHRDLKPMNIFIDESRNVKIGDFG 161 (303)
T ss_dssp EEEEEECCCSCBHHHHHHHSCG----GGCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred eEEEEecCCCCCHHHhhhcccc----ccchHHHHHHHHHHHHHHHHHHhC----CeecccCCHHhEEEcCCCCEEEeeCc
Confidence 7999999999999999986432 478899999999999999999977 79999999999999999999999999
Q ss_pred CccccCcc------------------ccccccceeeCccccccC-CCCCcchHHHHHHHHHHHHhCCCCccccccCCCCC
Q 044996 520 LIPVMNQE------------------SAQELMIAYKSPEFLQLG-RITKKTDVWSLGVLILEIMTGKFPANFLQQGKKAD 580 (678)
Q Consensus 520 la~~~~~~------------------~~~~~~~~y~aPE~~~~~-~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~ 580 (678)
+++..... ....++..|+|||++.+. .++.++|||||||++|||++ ||...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~------- 231 (303)
T 1zy4_A 162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG------- 231 (303)
T ss_dssp CCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH-------
T ss_pred chhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc-------
Confidence 99765421 122356789999998754 78999999999999999998 44310
Q ss_pred CChHHHHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 581 GDLASWVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 581 ~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
................ +.+. ........+.+++.+||+.||.+|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~----~~~~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 232 MERVNILKKLRSVSIE----FPPD-----FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHHHHHHHHSTTCC----CCTT-----CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhHHHHHHhccccccc----cCcc-----ccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 0111222222211111 1111 11123345678888999999999999999986
No 228
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.1e-37 Score=338.88 Aligned_cols=257 Identities=20% Similarity=0.265 Sum_probs=186.0
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCC------ceEEEEec
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKE------EKLLVHEF 446 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------~~~lv~Ey 446 (678)
.++||+|+||.||+|+.. +++.||||++.... +.+.+|+++|++++|||||+++++|.... ..++||||
T Consensus 59 ~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~ 134 (420)
T 1j1b_A 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY 134 (420)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhc
Confidence 467999999999999875 68999999986532 22347999999999999999999986422 36799999
Q ss_pred cCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCC-CceEEeecCCccccC
Q 044996 447 VPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNES-LEPVLADYGLIPVMN 525 (678)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~-~~~kl~DfGla~~~~ 525 (678)
+++ +|.+.+..... ....+++..+..++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||+++.+.
T Consensus 135 ~~~-~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~----~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~ 208 (420)
T 1j1b_A 135 VPE-TVYRVARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIHSF----GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208 (420)
T ss_dssp CCE-EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHTT----TEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred ccc-cHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHC----CccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence 975 67666643211 122699999999999999999999965 89999999999999965 678999999998654
Q ss_pred cc---ccccccceeeCccccccC-CCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhc-CC-----
Q 044996 526 QE---SAQELMIAYKSPEFLQLG-RITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLAN-GD----- 595 (678)
Q Consensus 526 ~~---~~~~~~~~y~aPE~~~~~-~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~-~~----- 595 (678)
.. ....++..|+|||++.+. .++.++|||||||++|||++|+.||.. .+-.+.+...+.. +.
T Consensus 209 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~--------~~~~~~l~~i~~~lg~p~~~~ 280 (420)
T 1j1b_A 209 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG--------DSGVDQLVEIIKVLGTPTREQ 280 (420)
T ss_dssp TTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHHHCSCCHHH
T ss_pred cCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHHHHHhCCCCHHH
Confidence 33 233467889999998764 789999999999999999999999962 1111111111110 00
Q ss_pred ------ccccccchhhhcc----cCCHHHHHHHHHHHhhcCccccccCCCHHHHHH--HHHHhhc
Q 044996 596 ------NRTEVFDKEMADE----RNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE--KIEEVKE 648 (678)
Q Consensus 596 ------~~~~~~d~~l~~~----~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~--~L~~i~~ 648 (678)
...+..-+.+... .+.......+.+++.+||+.||.+|||+.|+++ .++++..
T Consensus 281 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 345 (420)
T 1j1b_A 281 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 345 (420)
T ss_dssp HHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGC
T ss_pred HHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccccc
Confidence 0000000110000 000112345778888999999999999999986 4555543
No 229
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2.3e-37 Score=324.44 Aligned_cols=243 Identities=21% Similarity=0.274 Sum_probs=187.0
Q ss_pred hccccCccCceeEEEEEec-CCceEEEEEecccC--------hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEE
Q 044996 373 SAEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN--------NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLV 443 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 443 (678)
..+.||+|+||.||+|... +++.||||.+.... ......+.+|++++++++||||+++++++...+ .++|
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv 92 (322)
T 2ycf_A 14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIV 92 (322)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEE
T ss_pred EeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEE
Confidence 3567999999999999864 57899999986432 122345889999999999999999999987654 8999
Q ss_pred EeccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCc---eEEeecCC
Q 044996 444 HEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLE---PVLADYGL 520 (678)
Q Consensus 444 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~---~kl~DfGl 520 (678)
|||+++|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++. +||+|||+
T Consensus 93 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 93 LELMEGGELFDKVVGNK-----RLKEATCKLYFYQMLLAVQYLHEN----GIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp EECCTTEETHHHHSTTC-----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred EecCCCCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC----CeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 99999999999987542 589999999999999999999976 8999999999999987654 99999999
Q ss_pred ccccCccc---cccccceeeCccccc---cCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcC
Q 044996 521 IPVMNQES---AQELMIAYKSPEFLQ---LGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANG 594 (678)
Q Consensus 521 a~~~~~~~---~~~~~~~y~aPE~~~---~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~ 594 (678)
++...... ...++..|+|||++. ...++.++|||||||++|||++|+.||.... ....+...+ ..+
T Consensus 164 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----~~~~~~~~~----~~~ 235 (322)
T 2ycf_A 164 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR----TQVSLKDQI----TSG 235 (322)
T ss_dssp CEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTT----CSSCHHHHH----HHT
T ss_pred ceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc----hHHHHHHHH----HhC
Confidence 98765432 234678899999873 4678999999999999999999999996321 111222222 111
Q ss_pred CccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 595 DNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 595 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
... ..+.... .....+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~---~~~~~~~-----~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 236 KYN---FIPEVWA-----EVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CCC---CCHHHHT-----TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccc---cCchhhh-----hcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 110 1111111 11245778888999999999999999984
No 230
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=5.1e-37 Score=329.82 Aligned_cols=191 Identities=23% Similarity=0.273 Sum_probs=163.4
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccChhhHHHHHHHHHHHhccC-CC-----CccceeEEEEeCCceEEEEec
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLR-HP-----NLLPLVAYYYRKEEKLLVHEF 446 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-H~-----niv~l~~~~~~~~~~~lv~Ey 446 (678)
.+.||+|+||+||+|... +++.||||+++.. ....+++..|+++++.++ |+ +|+++++++...+..++||||
T Consensus 59 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 137 (382)
T 2vx3_A 59 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEM 137 (382)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEEC
T ss_pred EEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEec
Confidence 467999999999999864 6788999998753 344567888999988885 55 499999999999999999999
Q ss_pred cCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEec--CCCceEEeecCCcccc
Q 044996 447 VPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN--ESLEPVLADYGLIPVM 524 (678)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~--~~~~~kl~DfGla~~~ 524 (678)
++ |+|.+++..... ..+++..+..++.|++.||.|||.+ ..+|+||||||+|||++ .++.+||+|||+++..
T Consensus 138 ~~-~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~--~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~ 211 (382)
T 2vx3_A 138 LS-YNLYDLLRNTNF---RGVSLNLTRKFAQQMCTALLFLATP--ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL 211 (382)
T ss_dssp CC-CBHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHTST--TTCEECCCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred CC-CCHHHHHhhcCc---CCCCHHHHHHHHHHHHHHHHHhccC--CCCEEcCCCCcccEEEecCCCCcEEEEeccCceec
Confidence 95 699999986532 2589999999999999999999953 34799999999999994 5788999999999876
Q ss_pred Ccc-ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCcc
Q 044996 525 NQE-SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPAN 571 (678)
Q Consensus 525 ~~~-~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~ 571 (678)
... ....++..|+|||++.+..++.++|||||||++|||+||+.||.
T Consensus 212 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~ 259 (382)
T 2vx3_A 212 GQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFS 259 (382)
T ss_dssp TCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred ccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 543 33456788999999999899999999999999999999999997
No 231
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.7e-37 Score=321.52 Aligned_cols=240 Identities=19% Similarity=0.303 Sum_probs=188.4
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEeccc--ChhhHHHHHHHHHHHhccC--CCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQM--NNVGREEFQEHMRRLGRLR--HPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.+.||+|+||.||++...+++.||||++... .....+.+.+|++++.+++ |+||+++++++...+..++||| +.+
T Consensus 33 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 111 (313)
T 3cek_A 33 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 111 (313)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCC
Confidence 4679999999999999888999999998643 3445678999999999997 5999999999999999999999 558
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc-
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES- 528 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~- 528 (678)
++|.+++.... .+++.++..++.||+.||.|||+. +|+||||||+|||+++ +.+||+|||+++......
T Consensus 112 ~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~ 181 (313)
T 3cek_A 112 IDLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQH----GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTT 181 (313)
T ss_dssp EEHHHHHHHCS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEEET-TEEEECCCSSSCC------
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CceecCCCcccEEEEC-CeEEEeeccccccccCccc
Confidence 89999998653 589999999999999999999976 7999999999999965 899999999998765432
Q ss_pred -----cccccceeeCcccccc-----------CCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHh
Q 044996 529 -----AQELMIAYKSPEFLQL-----------GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLA 592 (678)
Q Consensus 529 -----~~~~~~~y~aPE~~~~-----------~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~ 592 (678)
...++..|+|||++.+ ..++.++|||||||++|||++|+.||... ..-...+.....
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~-------~~~~~~~~~~~~ 254 (313)
T 3cek_A 182 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-------INQISKLHAIID 254 (313)
T ss_dssp --------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTC-------CSHHHHHHHHHC
T ss_pred cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhH-------HHHHHHHHHHHh
Confidence 2246788999999865 47889999999999999999999999621 112222222222
Q ss_pred cCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHHH
Q 044996 593 NGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEK 642 (678)
Q Consensus 593 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~ 642 (678)
..... . + .......+.+++.+||+.||.+||++.|+++.
T Consensus 255 ~~~~~-~-----~-----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 255 PNHEI-E-----F-----PDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp TTSCC-C-----C-----CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccc-C-----C-----cccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 11110 0 0 00112346778889999999999999999873
No 232
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.8e-37 Score=328.89 Aligned_cols=262 Identities=23% Similarity=0.279 Sum_probs=179.8
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCc-------eEEEEe
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEE-------KLLVHE 445 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~-------~~lv~E 445 (678)
.+.||+|+||.||+|... ++..||||++.... .....+.+|++.+..++||||+++++++...+. .++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e 106 (360)
T 3e3p_A 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVME 106 (360)
T ss_dssp C----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEee
Confidence 467999999999999874 68899999886532 333456778888999999999999999976443 789999
Q ss_pred ccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecC-CCceEEeecCCcccc
Q 044996 446 FVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNE-SLEPVLADYGLIPVM 524 (678)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~-~~~~kl~DfGla~~~ 524 (678)
|+++ +|...+..... ....+++..+..++.|++.||.|||.+ ..+|+||||||+|||++. ++.+||+|||+++..
T Consensus 107 ~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~--~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~ 182 (360)
T 3e3p_A 107 YVPD-TLHRCCRNYYR-RQVAPPPILIKVFLFQLIRSIGCLHLP--SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL 182 (360)
T ss_dssp CCSC-BHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHTST--TTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCC
T ss_pred cccc-cHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhCC--CCCeecCcCCHHHEEEeCCCCcEEEeeCCCceec
Confidence 9976 55554442111 122588999999999999999999932 338999999999999997 899999999999876
Q ss_pred Cccc---cccccceeeCccccccC-CCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhc-CCcccc
Q 044996 525 NQES---AQELMIAYKSPEFLQLG-RITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLAN-GDNRTE 599 (678)
Q Consensus 525 ~~~~---~~~~~~~y~aPE~~~~~-~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~ 599 (678)
.... ...++..|+|||++.+. .++.++|||||||++|||+||+.||... .....+...... +....+
T Consensus 183 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~--------~~~~~~~~~~~~~~~~~~~ 254 (360)
T 3e3p_A 183 SPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGD--------NSAGQLHEIVRVLGCPSRE 254 (360)
T ss_dssp CTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHHHCCCCHH
T ss_pred CCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCC--------ChHHHHHHHHHHcCCCCHH
Confidence 5432 23467889999998654 4899999999999999999999999721 111111111110 000000
Q ss_pred cc---ch-----hhh--------c--ccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH--HHHHhhc
Q 044996 600 VF---DK-----EMA--------D--ERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE--KIEEVKE 648 (678)
Q Consensus 600 ~~---d~-----~l~--------~--~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~--~L~~i~~ 648 (678)
.+ ++ ... . ..........+.+++.+||+.||.+|||+.|+++ .++++..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 323 (360)
T 3e3p_A 255 VLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD 323 (360)
T ss_dssp HHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred HHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCC
Confidence 00 00 000 0 0001123456888999999999999999999986 3554433
No 233
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=4.2e-37 Score=326.62 Aligned_cols=255 Identities=16% Similarity=0.251 Sum_probs=191.2
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC-hhhHHHHHHHHHHHhccCCCCccceeEEEEeC-----CceEEEEec
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN-NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRK-----EEKLLVHEF 446 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~~~lv~Ey 446 (678)
.+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++... ...++||||
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~ 95 (353)
T 2b9h_A 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQEL 95 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECC
T ss_pred eeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEec
Confidence 467999999999999875 68899999997533 34456788999999999999999999998754 578999999
Q ss_pred cCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCc
Q 044996 447 VPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQ 526 (678)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 526 (678)
+. |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 96 ~~-~~L~~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~~----~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 96 MQ-TDLHRVISTQ------MLSDDHIQYFIYQTLRAVKVLHGS----NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp CS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred cC-ccHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHC----CeecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 96 6999998753 589999999999999999999976 899999999999999999999999999986643
Q ss_pred cc--------------cccccceeeCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 044996 527 ES--------------AQELMIAYKSPEFLQL-GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVL 591 (678)
Q Consensus 527 ~~--------------~~~~~~~y~aPE~~~~-~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~ 591 (678)
.. ...++..|+|||++.. ..++.++|||||||++|||++|+.||... +..+......
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--------~~~~~~~~~~ 236 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGR--------DYRHQLLLIF 236 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCS--------SHHHHHHHHH
T ss_pred ccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCC--------CcHHHHHHHH
Confidence 21 1235788999998754 67899999999999999999999999621 1111111111
Q ss_pred ---hcCC---ccccccchh-------hhc-ccC-----CHHHHHHHHHHHhhcCccccccCCCHHHHHH--HHHHhh
Q 044996 592 ---ANGD---NRTEVFDKE-------MAD-ERN-----SEGEMVKLLKIGLACCEEEVEKRLDLKEAVE--KIEEVK 647 (678)
Q Consensus 592 ---~~~~---~~~~~~d~~-------l~~-~~~-----~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~--~L~~i~ 647 (678)
.... ....+.+.. +.. ... .......+.+++.+||+.||++|||+.|+++ .++.+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 313 (353)
T 2b9h_A 237 GIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH 313 (353)
T ss_dssp HHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred HHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccC
Confidence 0000 000000000 000 000 0012345678888999999999999999987 354443
No 234
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=4.8e-37 Score=322.38 Aligned_cols=252 Identities=21% Similarity=0.278 Sum_probs=189.1
Q ss_pred ccccCccCceeEEEEEe--cCCceEEEEEecccC--hhhHHHHHHHHHHHhcc---CCCCccceeEEEE-----eCCceE
Q 044996 374 AEILGSGCFGSSYKASL--STGAMMVVKRFKQMN--NVGREEFQEHMRRLGRL---RHPNLLPLVAYYY-----RKEEKL 441 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~H~niv~l~~~~~-----~~~~~~ 441 (678)
.+.||+|+||.||+|+. .+++.||+|+++... ......+.+|+.+++++ +||||+++++++. .....+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~ 95 (326)
T 1blx_A 16 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 95 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEE
T ss_pred eeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEE
Confidence 46799999999999987 467889999987432 12233566777777666 8999999999997 456789
Q ss_pred EEEeccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCc
Q 044996 442 LVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLI 521 (678)
Q Consensus 442 lv~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla 521 (678)
+||||+. |+|.+++..... ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 96 lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~----gi~H~dlkp~Nili~~~~~~kl~Dfg~~ 167 (326)
T 1blx_A 96 LVFEHVD-QDLTTYLDKVPE---PGVPTETIKDMMFQLLRGLDFLHSH----RVVHRDLKPQNILVTSSGQIKLADFGLA 167 (326)
T ss_dssp EEEECCS-CBHHHHHHHSCT---TCSCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTCCEEECSCCSC
T ss_pred EEEecCC-CCHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHHHC----CceeccCCHHHeEEcCCCCEEEecCccc
Confidence 9999997 699999986532 2489999999999999999999976 8999999999999999999999999999
Q ss_pred cccCccc---cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhc-CCcc
Q 044996 522 PVMNQES---AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLAN-GDNR 597 (678)
Q Consensus 522 ~~~~~~~---~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~-~~~~ 597 (678)
+...... ...++..|+|||++.+..++.++|||||||++|||++|+.||... .-.+.+...+.. +...
T Consensus 168 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--------~~~~~~~~i~~~~~~~~ 239 (326)
T 1blx_A 168 RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS--------SDVDQLGKILDVIGLPG 239 (326)
T ss_dssp CCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS--------SHHHHHHHHHHHHCCCC
T ss_pred ccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCC--------CHHHHHHHHHHHcCCCC
Confidence 8765432 234578899999999889999999999999999999999999621 112222222210 0000
Q ss_pred ccc-------cchhhh------cccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 598 TEV-------FDKEMA------DERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 598 ~~~-------~d~~l~------~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.+. ....+. ...........+.+++.+||+.||.+|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 240 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000 000000 00000112345677888999999999999999985
No 235
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=4.2e-37 Score=326.82 Aligned_cols=248 Identities=22% Similarity=0.309 Sum_probs=187.1
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEeccc--ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCc------eEEEE
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQM--NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEE------KLLVH 444 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~------~~lv~ 444 (678)
.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.++++++||||+++++++...+. .++||
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 108 (353)
T 3coi_A 29 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 108 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEe
Confidence 46799999999999986 46889999998753 33445778999999999999999999999987654 49999
Q ss_pred eccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCcccc
Q 044996 445 EFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM 524 (678)
Q Consensus 445 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 524 (678)
||+. |+|.+++.. .+++.++..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 109 e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~LH~~----~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 176 (353)
T 3coi_A 109 PFMQ-TDLQKIMGL-------KFSEEKIQYLVYQMLKGLKYIHSA----GVVHRDLKPGNLAVNEDCELKILDFGLARHA 176 (353)
T ss_dssp ECCS-EEGGGTTTS-------CCCHHHHHHHHHHHHHHHHHHHHT----TCCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred cccc-CCHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCCHHHEeECCCCcEEEeecccccCC
Confidence 9997 688877642 489999999999999999999976 8999999999999999999999999999876
Q ss_pred Ccc-ccccccceeeCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhc-CCcccc--
Q 044996 525 NQE-SAQELMIAYKSPEFLQL-GRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLAN-GDNRTE-- 599 (678)
Q Consensus 525 ~~~-~~~~~~~~y~aPE~~~~-~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~-- 599 (678)
... ....++..|+|||++.+ ..++.++|||||||++|||++|+.||.. .+..+.+...... +....+
T Consensus 177 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~--------~~~~~~~~~i~~~~~~~~~~~~ 248 (353)
T 3coi_A 177 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG--------KDYLDQLTQILKVTGVPGTEFV 248 (353)
T ss_dssp -------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBS--------SCHHHHHHHHHHHHCBCCHHHH
T ss_pred CCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHHHHHhCCCCHHHH
Confidence 543 22346788999999876 6789999999999999999999999972 1222222222110 000000
Q ss_pred --ccch-------hhhc------ccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 600 --VFDK-------EMAD------ERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 600 --~~d~-------~l~~------~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
+.+. .+.. ..........+.+++.+|++.||++|||+.|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 249 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp TTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000 0000 0000122345778888999999999999999986
No 236
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=3.1e-37 Score=325.57 Aligned_cols=248 Identities=18% Similarity=0.235 Sum_probs=168.0
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccChhhHHHHHHHHHHHhccCCCCccceeEEEEe----CCceEEEEeccC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR----KEEKLLVHEFVP 448 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~~lv~Ey~~ 448 (678)
.++||+|+||.||+|... +++.||||++.... ....+....+..++||||+++++++.. ....++||||++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 109 (336)
T 3fhr_A 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECME 109 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCT
T ss_pred ceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccC
Confidence 356999999999999875 68999999986531 122223334667799999999999976 445899999999
Q ss_pred CCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecC---CCceEEeecCCccccC
Q 044996 449 KRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNE---SLEPVLADYGLIPVMN 525 (678)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~---~~~~kl~DfGla~~~~ 525 (678)
+|+|.+++..... ..+++.++..++.||+.||.|||+. +|+||||||+|||++. ++.+||+|||+++...
T Consensus 110 gg~L~~~l~~~~~---~~l~~~~~~~i~~ql~~~l~~LH~~----~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~ 182 (336)
T 3fhr_A 110 GGELFSRIQERGD---QAFTEREAAEIMRDIGTAIQFLHSH----NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 182 (336)
T ss_dssp TEEHHHHHHTC-C---CCCBHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-
T ss_pred CCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhC----CeecCCCCHHHEEEEecCCCceEEEeccccceecc
Confidence 9999999986532 2599999999999999999999977 8999999999999986 4569999999997665
Q ss_pred cc--ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccch
Q 044996 526 QE--SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDK 603 (678)
Q Consensus 526 ~~--~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~ 603 (678)
.. ....++..|+|||++.+..++.++|||||||++|||++|+.||...... ............... ....+
T Consensus 183 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~--~~~~~ 255 (336)
T 3fhr_A 183 QNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQ-----AISPGMKRRIRLGQY--GFPNP 255 (336)
T ss_dssp ---------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------CCCTT
T ss_pred ccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccch-----hhhhhHHHhhhcccc--ccCch
Confidence 43 2334678899999998888999999999999999999999999632111 100000000000000 00000
Q ss_pred hhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH--HHHH
Q 044996 604 EMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE--KIEE 645 (678)
Q Consensus 604 ~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~--~L~~ 645 (678)
. .......+.+++.+||+.||.+|||+.|+++ .+.+
T Consensus 256 ~------~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 293 (336)
T 3fhr_A 256 E------WSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ 293 (336)
T ss_dssp T------STTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred h------hccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccc
Confidence 0 0112345778888999999999999999998 4444
No 237
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=5.1e-37 Score=335.19 Aligned_cols=244 Identities=17% Similarity=0.216 Sum_probs=182.8
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhcc-CCCCccceeEEEEeCCceEEEEeccCCCCH
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRL-RHPNLLPLVAYYYRKEEKLLVHEFVPKRSL 452 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL 452 (678)
.++||+|+||+||.+...+|+.||||++... ..+.+.+|++++.++ +|||||++++++.+.+..++||||+. |+|
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 3679999999998777778999999998653 245678999999886 89999999999999999999999995 799
Q ss_pred HHHhhccCCCCC--CCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCC-------------CceEEee
Q 044996 453 AVNLHGHQALGQ--PSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNES-------------LEPVLAD 517 (678)
Q Consensus 453 ~~~l~~~~~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~-------------~~~kl~D 517 (678)
.+++........ ....+..++.|+.||+.||+|||+. +|+||||||+|||++.+ +.+||+|
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~D 171 (434)
T 2rio_A 96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL----KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 171 (434)
T ss_dssp HHHHHTC------------CCHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECC
T ss_pred HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC----CccccCCChHhEEEecCcccccccccCCCceEEEEcc
Confidence 999986543211 1124456788999999999999976 89999999999999754 5899999
Q ss_pred cCCccccCccc--------cccccceeeCcccccc-------CCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCC
Q 044996 518 YGLIPVMNQES--------AQELMIAYKSPEFLQL-------GRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADG 581 (678)
Q Consensus 518 fGla~~~~~~~--------~~~~~~~y~aPE~~~~-------~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~ 581 (678)
||+++.+.... ...++..|+|||++.+ ..++.++|||||||++|||+| |+.||...
T Consensus 172 FG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~-------- 243 (434)
T 2rio_A 172 FGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK-------- 243 (434)
T ss_dssp CTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCST--------
T ss_pred cccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCc--------
Confidence 99998765432 2246788999999865 578999999999999999999 99998621
Q ss_pred ChHHHHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 582 DLASWVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 582 ~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.... ...+......... ...........+.+++.+||+.||.+|||+.||++
T Consensus 244 ~~~~--~~i~~~~~~~~~~------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 244 YSRE--SNIIRGIFSLDEM------KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp TTHH--HHHHHTCCCCCCC------TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhH--HHHhcCCCCcccc------cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1011 1111111111000 00112344567888999999999999999999985
No 238
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=6.4e-37 Score=321.77 Aligned_cols=249 Identities=20% Similarity=0.290 Sum_probs=172.2
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC-hhhHHHHHHHHH-HHhccCCCCccceeEEEEeCCceEEEEeccCCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN-NVGREEFQEHMR-RLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKR 450 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~-~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~g 450 (678)
.+.||+|+||.||+|... +++.||||+++... .....++..|+. +++.++||||+++++++...+..++||||++ |
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~-~ 105 (327)
T 3aln_A 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMS-T 105 (327)
T ss_dssp -CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCS-E
T ss_pred hheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecC-C
Confidence 467999999999999874 68899999997542 334455666666 6778899999999999999999999999997 4
Q ss_pred CHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc--
Q 044996 451 SLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES-- 528 (678)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~-- 528 (678)
+|.+++..........+++..+..++.|++.||.|||+.. +|+||||||+|||++.++.+||+|||+++......
T Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 182 (327)
T 3aln_A 106 SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL---KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK 182 (327)
T ss_dssp EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH---SCCCSCCCGGGEEEETTTEEEECCCSSSCC-------
T ss_pred ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC---CEeECCCCHHHEEEcCCCCEEEccCCCceeccccccc
Confidence 8888776422111236899999999999999999999752 69999999999999999999999999998765432
Q ss_pred -cccccceeeCcccc----ccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccch
Q 044996 529 -AQELMIAYKSPEFL----QLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDK 603 (678)
Q Consensus 529 -~~~~~~~y~aPE~~----~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~ 603 (678)
...++..|+|||++ .+..++.++|||||||++|||++|+.||..... ..+.+.... ....+
T Consensus 183 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~-------~~~~~ 248 (327)
T 3aln_A 183 TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNS-------VFDQLTQVV-------KGDPP 248 (327)
T ss_dssp -----------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------CCCC-------CSCCC
T ss_pred ccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcch-------HHHHHHHHh-------cCCCC
Confidence 22467889999998 456789999999999999999999999963111 000000000 00001
Q ss_pred hhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 604 EMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 604 ~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.+... ........+.+++.+||+.||.+|||+.|+++
T Consensus 249 ~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 249 QLSNS-EEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCCCC-SSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCc-ccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 11100 00112345778888999999999999999987
No 239
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=330.85 Aligned_cols=238 Identities=17% Similarity=0.216 Sum_probs=180.3
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhcc-CCCCccceeEEEEeCCceEEEEeccCCCCH
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRL-RHPNLLPLVAYYYRKEEKLLVHEFVPKRSL 452 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL 452 (678)
.++||+|+||+||.....+++.||||++..... ..+.+|+++++++ +|||||++++++.+....|+||||+. |+|
T Consensus 29 ~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L 104 (432)
T 3p23_A 29 KDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATL 104 (432)
T ss_dssp EEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEH
T ss_pred CCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCH
Confidence 467999999997766666889999999865322 2356899999999 79999999999999999999999996 699
Q ss_pred HHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecC-----CCceEEeecCCccccCcc
Q 044996 453 AVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNE-----SLEPVLADYGLIPVMNQE 527 (678)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~-----~~~~kl~DfGla~~~~~~ 527 (678)
.+++..... .+.+.++..++.||+.||+|||+. +|+||||||+|||++. ...+||+|||+++.....
T Consensus 105 ~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~----~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~ 176 (432)
T 3p23_A 105 QEYVEQKDF----AHLGLEPITLLQQTTSGLAHLHSL----NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176 (432)
T ss_dssp HHHHHSSSC----CCCSSCHHHHHHHHHHHHHHHHHT----TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred HHHHHhcCC----CccchhHHHHHHHHHHHHHHHHHC----cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence 999986542 355567789999999999999976 7999999999999943 346889999999876532
Q ss_pred -------ccccccceeeCccccc---cCCCCCcchHHHHHHHHHHHHh-CCCCccccccCCCCCCChHHHHHHHHhcCCc
Q 044996 528 -------SAQELMIAYKSPEFLQ---LGRITKKTDVWSLGVLILEIMT-GKFPANFLQQGKKADGDLASWVNSVLANGDN 596 (678)
Q Consensus 528 -------~~~~~~~~y~aPE~~~---~~~~t~ksDvwS~Gvvl~el~t-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 596 (678)
....+|..|+|||++. ...++.++|||||||++|||+| |+.||... ........... ..
T Consensus 177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~---------~~~~~~~~~~~-~~ 246 (432)
T 3p23_A 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKS---------LQRQANILLGA-CS 246 (432)
T ss_dssp ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBST---------TTHHHHHHTTC-CC
T ss_pred CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchh---------hHHHHHHHhcc-CC
Confidence 2234788999999997 4567889999999999999999 99998521 11111111111 11
Q ss_pred cccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 597 RTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 597 ~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
. ....+ .......+.+++.+||+.||.+|||+.||++
T Consensus 247 ~-~~~~~-------~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 247 L-DCLHP-------EKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp C-TTSCT-------TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred c-cccCc-------cccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 1 11111 1123344678888999999999999999983
No 240
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.3e-36 Score=325.34 Aligned_cols=258 Identities=20% Similarity=0.257 Sum_probs=193.3
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccChhhHHHHHHHHHHHhccC-----------CCCccceeEEEEeCC---
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRLGRLR-----------HPNLLPLVAYYYRKE--- 438 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------H~niv~l~~~~~~~~--- 438 (678)
.+.||+|+||.||+|.. .+++.||||++... ....+.+.+|++++++++ |+||+++++++...+
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 102 (373)
T 1q8y_A 24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNG 102 (373)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTE
T ss_pred EEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCC
Confidence 46799999999999986 56889999998753 345677889999999886 899999999998654
Q ss_pred -ceEEEEeccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEec------CCC
Q 044996 439 -EKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN------ESL 511 (678)
Q Consensus 439 -~~~lv~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~------~~~ 511 (678)
..++||||+ +++|.+++..... ..+++..+..|+.||+.||+|||+.+ +|+||||||+|||++ .++
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~lH~~~---~ivH~Dikp~NIll~~~~~~~~~~ 175 (373)
T 1q8y_A 103 VHVVMVFEVL-GENLLALIKKYEH---RGIPLIYVKQISKQLLLGLDYMHRRC---GIIHTDIKPENVLMEIVDSPENLI 175 (373)
T ss_dssp EEEEEEECCC-CEEHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHHHTT---CEECSCCSGGGEEEEEEETTTTEE
T ss_pred ceEEEEEecC-CCCHHHHHHHhhc---cCCcHHHHHHHHHHHHHHHHHHHhcC---CEEecCCChHHeEEeccCCCcCcc
Confidence 689999999 8999999986532 24899999999999999999999753 699999999999994 445
Q ss_pred ceEEeecCCccccCcc-ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHH
Q 044996 512 EPVLADYGLIPVMNQE-SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSV 590 (678)
Q Consensus 512 ~~kl~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~ 590 (678)
.+||+|||+++..... ....++..|+|||++.+..++.++|||||||++|||+||+.||........ ..-.+.+...
T Consensus 176 ~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~ 253 (373)
T 1q8y_A 176 QIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSY--TKDDDHIAQI 253 (373)
T ss_dssp EEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC-----------CHHHHHHHH
T ss_pred eEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCccccc--CChHHHHHHH
Confidence 8999999999876543 234568899999999988999999999999999999999999973221100 0011111111
Q ss_pred Hhc-CC--------------------ccccc-------cchhh-hcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 591 LAN-GD--------------------NRTEV-------FDKEM-ADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 591 ~~~-~~--------------------~~~~~-------~d~~l-~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
... +. ....+ ....+ ............+.+++.+||+.||++|||+.||++
T Consensus 254 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 254 IELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp HHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred HHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence 100 00 00000 00000 011233456778889999999999999999999987
No 241
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.2e-36 Score=320.90 Aligned_cols=254 Identities=16% Similarity=0.236 Sum_probs=191.9
Q ss_pred ccccCccCceeEEEEEec-CC-ceEEEEEecccChhhHHHHHHHHHHHhccCCCC------ccceeEEEEeCCceEEEEe
Q 044996 374 AEILGSGCFGSSYKASLS-TG-AMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPN------LLPLVAYYYRKEEKLLVHE 445 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~~~~~~~~~~~lv~E 445 (678)
.+.||+|+||.||+|... ++ ..||+|+++.. ....+.+.+|++++++++|++ ++.+++++...+..++|||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e 102 (355)
T 2eu9_A 24 VGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFE 102 (355)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEE
T ss_pred EEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEe
Confidence 467999999999999864 34 68999998753 345677889999999997766 8999999999999999999
Q ss_pred ccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEe------------------
Q 044996 446 FVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLL------------------ 507 (678)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl------------------ 507 (678)
|+ +++|.+++..... ..+++.++..|+.||+.||+|||+. +|+||||||+|||+
T Consensus 103 ~~-~~~l~~~l~~~~~---~~~~~~~~~~i~~qi~~~L~~lH~~----~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~ 174 (355)
T 2eu9_A 103 LL-GKNTFEFLKENNF---QPYPLPHVRHMAYQLCHALRFLHEN----QLTHTDLKPENILFVNSEFETLYNEHKSCEEK 174 (355)
T ss_dssp CC-CCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHTT----TEECCCCCGGGEEESCCCEEEEECCC-CCCEE
T ss_pred cc-CCChHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCCHHHEEEeccccccccccccccccc
Confidence 99 6778877765432 2589999999999999999999965 89999999999999
Q ss_pred -cCCCceEEeecCCccccCcc-ccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHH
Q 044996 508 -NESLEPVLADYGLIPVMNQE-SAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLAS 585 (678)
Q Consensus 508 -~~~~~~kl~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~ 585 (678)
+.++.+||+|||+++..... ....++..|+|||++.+..++.++|||||||++|||++|+.||..... .....
T Consensus 175 ~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~~ 249 (355)
T 2eu9_A 175 SVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN-----REHLV 249 (355)
T ss_dssp EESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHH
T ss_pred ccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH-----HHHHH
Confidence 67889999999999865443 334578899999999988999999999999999999999999962110 11111
Q ss_pred HHHHHHhcC--------Cccccccch--------------------hhhcccCCHHHHHHHHHHHhhcCccccccCCCHH
Q 044996 586 WVNSVLANG--------DNRTEVFDK--------------------EMADERNSEGEMVKLLKIGLACCEEEVEKRLDLK 637 (678)
Q Consensus 586 ~~~~~~~~~--------~~~~~~~d~--------------------~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ 637 (678)
.+......- .......+. ..........+...+.+++.+||+.||++|||+.
T Consensus 250 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ 329 (355)
T 2eu9_A 250 MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLA 329 (355)
T ss_dssp HHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHH
T ss_pred HHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHH
Confidence 111111100 000000000 0000011223455788999999999999999999
Q ss_pred HHHH
Q 044996 638 EAVE 641 (678)
Q Consensus 638 ev~~ 641 (678)
|+++
T Consensus 330 e~l~ 333 (355)
T 2eu9_A 330 EALL 333 (355)
T ss_dssp HHTT
T ss_pred HHhc
Confidence 9974
No 242
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.8e-37 Score=325.07 Aligned_cols=232 Identities=19% Similarity=0.265 Sum_probs=188.2
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccCh------hhHHHHHHHHHHHhccC--CCCccceeEEEEeCCceEEEE
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMNN------VGREEFQEHMRRLGRLR--HPNLLPLVAYYYRKEEKLLVH 444 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~~~~~lv~ 444 (678)
.+.||+|+||.||+|.. .+++.||||.++.... ...+.+.+|+.++++++ |+||+++++++...+..++||
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~ 127 (320)
T 3a99_A 48 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 127 (320)
T ss_dssp EEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEE
Confidence 46799999999999975 5688999999875321 12345778999999996 599999999999999999999
Q ss_pred eccCC-CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEec-CCCceEEeecCCcc
Q 044996 445 EFVPK-RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN-ESLEPVLADYGLIP 522 (678)
Q Consensus 445 Ey~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~-~~~~~kl~DfGla~ 522 (678)
||+.. ++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++ +++.+||+|||+++
T Consensus 128 e~~~~~~~L~~~l~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~----~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~ 198 (320)
T 3a99_A 128 ERPEPVQDLFDFITERG-----ALQEELARSFFWQVLEAVRHCHNC----GVLHRDIKDENILIDLNRGELKLIDFGSGA 198 (320)
T ss_dssp ECCSSEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EcCCCCccHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC----CcEeCCCCHHHEEEeCCCCCEEEeeCcccc
Confidence 99976 89999997643 589999999999999999999976 899999999999999 78999999999998
Q ss_pred ccCccc--cccccceeeCccccccCCC-CCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCcccc
Q 044996 523 VMNQES--AQELMIAYKSPEFLQLGRI-TKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTE 599 (678)
Q Consensus 523 ~~~~~~--~~~~~~~y~aPE~~~~~~~-t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 599 (678)
...... ...++..|+|||++.+..+ +.++|||||||++|||++|+.||.... . ........
T Consensus 199 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~----------~----~~~~~~~~-- 262 (320)
T 3a99_A 199 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----------E----IIRGQVFF-- 262 (320)
T ss_dssp ECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----------H----HHHCCCCC--
T ss_pred ccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh----------h----hhcccccc--
Confidence 765432 2346788999999987665 688999999999999999999986210 1 11111000
Q ss_pred ccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 600 VFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 600 ~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
. .. ....+.+++.+||+.||.+|||+.||++
T Consensus 263 --~-----~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 263 --R-----QR----VSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp --S-----SC----CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --c-----cc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 11 1234677888999999999999999986
No 243
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2e-37 Score=323.29 Aligned_cols=232 Identities=19% Similarity=0.273 Sum_probs=183.2
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccCh------hhHHHHHHHHHHHhcc----CCCCccceeEEEEeCCceEE
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMNN------VGREEFQEHMRRLGRL----RHPNLLPLVAYYYRKEEKLL 442 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l----~H~niv~l~~~~~~~~~~~l 442 (678)
.+.||+|+||.||+|.. .+++.||||++..... .....+.+|+.++.++ +|+||+++++++...+..++
T Consensus 36 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~ 115 (312)
T 2iwi_A 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFML 115 (312)
T ss_dssp EEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEE
T ss_pred eeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEE
Confidence 46799999999999976 4688999999875432 1233466799999988 89999999999999999999
Q ss_pred EEec-cCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEec-CCCceEEeecCC
Q 044996 443 VHEF-VPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLN-ESLEPVLADYGL 520 (678)
Q Consensus 443 v~Ey-~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~-~~~~~kl~DfGl 520 (678)
|||| +.+++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++ +++.+||+|||+
T Consensus 116 v~e~~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~~kl~dfg~ 186 (312)
T 2iwi_A 116 VLERPLPAQDLFDYITEKG-----PLGEGPSRCFFGQVVAAIQHCHSR----GVVHRDIKDENILIDLRRGCAKLIDFGS 186 (312)
T ss_dssp EEECCSSEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHH----TEECCCCSGGGEEEETTTTEEEECCCSS
T ss_pred EEEecCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CeeecCCChhhEEEeCCCCeEEEEEcch
Confidence 9999 78999999998643 489999999999999999999987 799999999999999 899999999999
Q ss_pred ccccCccc--cccccceeeCccccccCCCC-CcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCcc
Q 044996 521 IPVMNQES--AQELMIAYKSPEFLQLGRIT-KKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNR 597 (678)
Q Consensus 521 a~~~~~~~--~~~~~~~y~aPE~~~~~~~t-~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 597 (678)
++...... ...++..|+|||++.+..+. .++|||||||++|||++|+.||... . .........
T Consensus 187 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~----------~----~~~~~~~~~ 252 (312)
T 2iwi_A 187 GALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD----------Q----EILEAELHF 252 (312)
T ss_dssp CEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH----------H----HHHHTCCCC
T ss_pred hhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh----------H----HHhhhccCC
Confidence 98765432 33467889999998776664 5899999999999999999998621 0 111111000
Q ss_pred ccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 598 TEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 598 ~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
.......+.+++.+||+.||++|||+.|+++
T Consensus 253 -------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 253 -------------PAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp -------------CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -------------cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0112234677888999999999999999986
No 244
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=2.1e-36 Score=316.23 Aligned_cols=254 Identities=21% Similarity=0.286 Sum_probs=179.0
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccCh-h-hHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMNN-V-GREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPKR 450 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~-~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~g 450 (678)
.+.||+|+||.||+|... +++.||||++..... . ..+.+.++..+++.++||||+++++++...+..++||||+ ++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~ 108 (318)
T 2dyl_A 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GT 108 (318)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SE
T ss_pred cceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CC
Confidence 467999999999999875 688999999975432 2 2334455556788889999999999999999999999999 55
Q ss_pred CHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc--
Q 044996 451 SLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES-- 528 (678)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~-- 528 (678)
.+..+..... ..+++..+..++.|++.||.|||+.+ +|+||||||+|||++.++.+||+|||+++......
T Consensus 109 ~~~~l~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 181 (318)
T 2dyl_A 109 CAEKLKKRMQ----GPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK 181 (318)
T ss_dssp EHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred cHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCccc
Confidence 5555554322 25899999999999999999999732 69999999999999999999999999987654432
Q ss_pred -cccccceeeCccccc-----cCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccc
Q 044996 529 -AQELMIAYKSPEFLQ-----LGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFD 602 (678)
Q Consensus 529 -~~~~~~~y~aPE~~~-----~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d 602 (678)
...++..|+|||++. ...++.++|||||||++|||++|+.||... ....+.+..........
T Consensus 182 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-------~~~~~~~~~~~~~~~~~----- 249 (318)
T 2dyl_A 182 DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNC-------KTDFEVLTKVLQEEPPL----- 249 (318)
T ss_dssp -----CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTC-------CSHHHHHHHHHHSCCCC-----
T ss_pred cccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCC-------CccHHHHHHHhccCCCC-----
Confidence 234678899999984 457899999999999999999999999621 12223333333322111
Q ss_pred hhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH--HHHHhhccCCC
Q 044996 603 KEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE--KIEEVKERDGD 652 (678)
Q Consensus 603 ~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~--~L~~i~~~~~~ 652 (678)
+.... .....+.+++.+||+.||.+||++.|+++ .+++......+
T Consensus 250 --~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~~~~ 296 (318)
T 2dyl_A 250 --LPGHM---GFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLEVD 296 (318)
T ss_dssp --CCSSS---CCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHHHHSCCC
T ss_pred --CCccC---CCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhcccccch
Confidence 00000 11234677888999999999999999997 45555544433
No 245
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.4e-36 Score=350.37 Aligned_cols=234 Identities=17% Similarity=0.187 Sum_probs=188.8
Q ss_pred ccccCccCceeEEEEEec--CCceEEEEEeccc-ChhhHHHHHHHHHHHhccCCCCccceeEEEEeCCc-----eEEEEe
Q 044996 374 AEILGSGCFGSSYKASLS--TGAMMVVKRFKQM-NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEE-----KLLVHE 445 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~-----~~lv~E 445 (678)
.+.||+|+||.||+|... +++.||||++... .....+.|.+|++++++++|||||++++++...+. .|||||
T Consensus 85 ~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E 164 (681)
T 2pzi_A 85 KGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVME 164 (681)
T ss_dssp EEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEE
Confidence 467999999999999875 5889999988653 33455678999999999999999999999987765 699999
Q ss_pred ccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccC
Q 044996 446 FVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMN 525 (678)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 525 (678)
|+++++|.+++.. .++|.+++.|+.||+.||.|||+. +|+||||||+|||++++ .+||+|||+++...
T Consensus 165 ~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH~~----giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~ 232 (681)
T 2pzi_A 165 YVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLHSI----GLVYNDLKPENIMLTEE-QLKLIDLGAVSRIN 232 (681)
T ss_dssp CCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred eCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHC----CCeecccChHHeEEeCC-cEEEEecccchhcc
Confidence 9999999887643 489999999999999999999976 79999999999999986 89999999998877
Q ss_pred ccccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhh
Q 044996 526 QESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEM 605 (678)
Q Consensus 526 ~~~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l 605 (678)
......+|..|+|||++.++ ++.++|||||||++|||++|..||...... .. ....+.
T Consensus 233 ~~~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~-------------------~~-~~~~~~- 290 (681)
T 2pzi_A 233 SFGYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVD-------------------GL-PEDDPV- 290 (681)
T ss_dssp CCSCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECS-------------------SC-CTTCHH-
T ss_pred cCCccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccc-------------------cc-cccccc-
Confidence 66666788999999998764 489999999999999999999887621100 00 000000
Q ss_pred hcccCCHHHHHHHHHHHhhcCccccccCC-CHHHHHHHHHHhh
Q 044996 606 ADERNSEGEMVKLLKIGLACCEEEVEKRL-DLKEAVEKIEEVK 647 (678)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-s~~ev~~~L~~i~ 647 (678)
......+.+++.+||+.||.+|| +++++.+.|..+.
T Consensus 291 ------~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 291 ------LKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp ------HHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ------cccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 01223577888899999999999 5777777777653
No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=8.1e-36 Score=307.19 Aligned_cols=238 Identities=11% Similarity=0.077 Sum_probs=176.9
Q ss_pred ccccCccCceeEEEEEec-CCceEEEEEecccC---hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEeccCC
Q 044996 374 AEILGSGCFGSSYKASLS-TGAMMVVKRFKQMN---NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHEFVPK 449 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~Ey~~~ 449 (678)
.+.||+|+||.||+|... +++.||||.+.... ....+.|.+|+.++.+++||||+++++++...+..|+||||+++
T Consensus 36 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 115 (286)
T 3uqc_A 36 LIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRG 115 (286)
T ss_dssp EEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCE
T ss_pred EEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCC
Confidence 357999999999999875 48899999997542 33457899999999999999999999999999999999999999
Q ss_pred CCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCcccc
Q 044996 450 RSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESA 529 (678)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 529 (678)
++|.+++... ....++.+|+.|++.||+|||+. +|+||||||+|||+++++.+||+++|
T Consensus 116 ~~L~~~l~~~-------~~~~~~~~i~~ql~~aL~~lH~~----givH~Dikp~NIll~~~g~~kl~~~~---------- 174 (286)
T 3uqc_A 116 GSLQEVADTS-------PSPVGAIRAMQSLAAAADAAHRA----GVALSIDHPSRVRVSIDGDVVLAYPA---------- 174 (286)
T ss_dssp EEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCSGGGEEEETTSCEEECSCC----------
T ss_pred CCHHHHHhcC-------CChHHHHHHHHHHHHHHHHHHHC----CCccCCCCcccEEEcCCCCEEEEecc----------
Confidence 9999999532 34557889999999999999977 89999999999999999999998654
Q ss_pred ccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhhhccc
Q 044996 530 QELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMADER 609 (678)
Q Consensus 530 ~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~ 609 (678)
|++ .++.++|||||||++|||+||+.||....... .+... . . ........+.....
T Consensus 175 ------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~----~~~~~----~-~-~~~~~~~~~~~~~~- 230 (286)
T 3uqc_A 175 ------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRS----GLAPA----E-R-DTAGQPIEPADIDR- 230 (286)
T ss_dssp ------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCC----CSEEC----C-B-CTTSCBCCHHHHCT-
T ss_pred ------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcch----hhHHH----H-H-HhccCCCChhhccc-
Confidence 333 37899999999999999999999997322110 00000 0 0 00000000000001
Q ss_pred CCHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHhhccCCCCccccccc
Q 044996 610 NSEGEMVKLLKIGLACCEEEVEKRLDLKEAVEKIEEVKERDGDEDFYSSYA 660 (678)
Q Consensus 610 ~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~~~~~~~~~ 660 (678)
.....+.+++.+||+.||.+| |+.|+++.|+++.....+.+......
T Consensus 231 ---~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~~~~~~~p~~ 277 (286)
T 3uqc_A 231 ---DIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVADRTEVLGPID 277 (286)
T ss_dssp ---TSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC------------
T ss_pred ---CCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCCccCCCCCCC
Confidence 123447788889999999999 99999999999998777666655443
No 247
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.3e-36 Score=341.99 Aligned_cols=265 Identities=20% Similarity=0.252 Sum_probs=198.5
Q ss_pred hccccCccCceeEEEEEe-cCCceEEEEEeccc-ChhhHHHHHHHHHHHhccCCCCccceeEEEEe------CCceEEEE
Q 044996 373 SAEILGSGCFGSSYKASL-STGAMMVVKRFKQM-NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR------KEEKLLVH 444 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~------~~~~~lv~ 444 (678)
..+.||+|+||.||+|.. .++..||||+++.. .....+.+.+|++++++++||||+++++++.. .+..++||
T Consensus 18 i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVm 97 (676)
T 3qa8_A 18 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAM 97 (676)
T ss_dssp CCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEE
T ss_pred EEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEE
Confidence 356799999999999976 46889999998753 44556789999999999999999999999765 56789999
Q ss_pred eccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCc---eEEeecCCc
Q 044996 445 EFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLE---PVLADYGLI 521 (678)
Q Consensus 445 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~---~kl~DfGla 521 (678)
||+++|+|.+++..... ...+++..+..|+.|++.||+|||+. +|+||||||+|||++.++. +||+|||++
T Consensus 98 Ey~~ggsL~~~L~~~~~--~~~lse~~i~~I~~QLl~aL~yLHs~----gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a 171 (676)
T 3qa8_A 98 EYCEGGDLRKYLNQFEN--CCGLKEGPIRTLLSDISSALRYLHEN----RIIHRDLKPENIVLQPGPQRLIHKIIDLGYA 171 (676)
T ss_dssp ECCSSCBHHHHHHSSSC--TTCCCSSHHHHHHHHHHHHHHHHHHT----TBCCCCCCSTTEEEECCSSSCEEEECSCCCC
T ss_pred EeCCCCCHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHHHC----CCccCCCCHHHeEeecCCCceeEEEcccccc
Confidence 99999999999986542 22589999999999999999999976 8999999999999997664 999999999
Q ss_pred cccCccc---cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCcc-
Q 044996 522 PVMNQES---AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNR- 597 (678)
Q Consensus 522 ~~~~~~~---~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~- 597 (678)
+...... ...++..|+|||++.+..++.++|||||||++|||++|+.||... .....|...........
T Consensus 172 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~-------~~~~~~~~~i~~~~~~~~ 244 (676)
T 3qa8_A 172 KELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN-------WQPVQWHGKVREKSNEHI 244 (676)
T ss_dssp CBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSS-------CHHHHSSTTCC------C
T ss_pred cccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcc-------cchhhhhhhhhcccchhh
Confidence 8765432 234678899999999999999999999999999999999999621 11122211111000000
Q ss_pred --ccc------cchhhhc-ccCCHHHHHHHHHHHhhcCccccccCCCHHH-----HHHHHHHhhccC
Q 044996 598 --TEV------FDKEMAD-ERNSEGEMVKLLKIGLACCEEEVEKRLDLKE-----AVEKIEEVKERD 650 (678)
Q Consensus 598 --~~~------~d~~l~~-~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~e-----v~~~L~~i~~~~ 650 (678)
.+. +...+.. ..........+.+++.+||+.||++|||+.| ..+.++.+....
T Consensus 245 ~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~k 311 (676)
T 3qa8_A 245 VVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLK 311 (676)
T ss_dssp CSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCC
T ss_pred hhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhcc
Confidence 000 0001000 0112234567888999999999999999988 556676665543
No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.9e-35 Score=320.70 Aligned_cols=237 Identities=16% Similarity=0.080 Sum_probs=173.8
Q ss_pred ccccCccCceeEEEEEe-cCCceEEEEEecccCh---hhHHHHHHHHHHHhccCC-CCccc---------eeEE------
Q 044996 374 AEILGSGCFGSSYKASL-STGAMMVVKRFKQMNN---VGREEFQEHMRRLGRLRH-PNLLP---------LVAY------ 433 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~H-~niv~---------l~~~------ 433 (678)
.++||+|+||+||+|.. .+|+.||||+++.... ...+.|.+|+.+++.++| +|+.. .+..
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 162 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC-
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCC
Confidence 46799999999999985 5789999999884322 235779999999999987 32211 1111
Q ss_pred ------EEe-----CCceEEEEeccCCCCHHHHhhccC--CCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCC
Q 044996 434 ------YYR-----KEEKLLVHEFVPKRSLAVNLHGHQ--ALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHI 500 (678)
Q Consensus 434 ------~~~-----~~~~~lv~Ey~~~gsL~~~l~~~~--~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdl 500 (678)
+.. ....+++|+++ +++|.+++.... ......++|..++.|+.||+.||+|||+. +|+||||
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~----~iiHrDi 237 (413)
T 3dzo_A 163 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY----GLVHTYL 237 (413)
T ss_dssp --------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT----TEECSCC
T ss_pred CccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC----CcccCCc
Confidence 111 12456777766 689999885210 00122588999999999999999999976 8999999
Q ss_pred CCCCEEecCCCceEEeecCCccccCccc-cccccceeeCcccc----------ccCCCCCcchHHHHHHHHHHHHhCCCC
Q 044996 501 KSSNVLLNESLEPVLADYGLIPVMNQES-AQELMIAYKSPEFL----------QLGRITKKTDVWSLGVLILEIMTGKFP 569 (678)
Q Consensus 501 k~~NILl~~~~~~kl~DfGla~~~~~~~-~~~~~~~y~aPE~~----------~~~~~t~ksDvwS~Gvvl~el~tg~~P 569 (678)
||+||||+.++.+||+|||+++...... ...+ ..|+|||++ ....++.++|||||||++|||+||+.|
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~P 316 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP 316 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCC
T ss_pred ccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCC
Confidence 9999999999999999999988765542 2335 889999999 555688999999999999999999999
Q ss_pred ccccccCCCCCCChHHHHHHHHhcCCccccccchhhhcccCCHHHHHHHHHHHhhcCccccccCCCHHHHHH
Q 044996 570 ANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEMADERNSEGEMVKLLKIGLACCEEEVEKRLDLKEAVE 641 (678)
Q Consensus 570 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~ 641 (678)
|...... +..+..+..... ....+.+++.+||+.||++||++.|+++
T Consensus 317 f~~~~~~----------------------~~~~~~~~~~~~---~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 317 NTDDAAL----------------------GGSEWIFRSCKN---IPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp CCTTGGG----------------------SCSGGGGSSCCC---CCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCcchh----------------------hhHHHHHhhccc---CCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 9632110 111111111111 1245777888999999999999877754
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=7.6e-35 Score=302.01 Aligned_cols=225 Identities=18% Similarity=0.237 Sum_probs=173.7
Q ss_pred cccCccCceeEEEEEe-cCCceEEEEEecccChhhHHHHHHHHHHH-hccCCCCccceeEEEEe----CCceEEEEeccC
Q 044996 375 EILGSGCFGSSYKASL-STGAMMVVKRFKQMNNVGREEFQEHMRRL-GRLRHPNLLPLVAYYYR----KEEKLLVHEFVP 448 (678)
Q Consensus 375 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~H~niv~l~~~~~~----~~~~~lv~Ey~~ 448 (678)
++||+|+||.||+|.. .+++.||+|+++.. ..+.+|++++ +.++||||+++++++.. ....++||||++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 98 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 98 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCC
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecC
Confidence 5799999999999986 56889999998642 4567888887 56699999999999987 667899999999
Q ss_pred CCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecC---CCceEEeecCCccccC
Q 044996 449 KRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNE---SLEPVLADYGLIPVMN 525 (678)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~---~~~~kl~DfGla~~~~ 525 (678)
+|+|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++...
T Consensus 99 ~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 171 (299)
T 3m2w_A 99 GGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLHSI----NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171 (299)
T ss_dssp SCBHHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT
T ss_pred CCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHhC----CcccCCCCHHHEEEecCCCCCcEEEeccccccccc
Confidence 9999999987532 2589999999999999999999976 8999999999999998 7899999999986533
Q ss_pred ccccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCccccccCCCCCCChHHHHHHHHhcCCccccccchhh
Q 044996 526 QESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFLQQGKKADGDLASWVNSVLANGDNRTEVFDKEM 605 (678)
Q Consensus 526 ~~~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l 605 (678)
+..++.++|||||||++|||+||+.||....... .. .. ....+.....
T Consensus 172 ------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~------------~~-~~-~~~~~~~~~~ 219 (299)
T 3m2w_A 172 ------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA------------IS-PG-MKTRIRMGQY 219 (299)
T ss_dssp ------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--------------------CC-SCCSSCTTCC
T ss_pred ------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchh------------hh-HH-HHHHHhhccc
Confidence 2457889999999999999999999996321100 00 00 0000000000
Q ss_pred hcccCC----HHHHHHHHHHHhhcCccccccCCCHHHHHH--HHHHh
Q 044996 606 ADERNS----EGEMVKLLKIGLACCEEEVEKRLDLKEAVE--KIEEV 646 (678)
Q Consensus 606 ~~~~~~----~~~~~~~~~l~~~Cl~~~P~~RPs~~ev~~--~L~~i 646 (678)
... ......+.+++.+||+.||.+|||+.|+++ .+.+.
T Consensus 220 ---~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~ 263 (299)
T 3m2w_A 220 ---EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 263 (299)
T ss_dssp ---SSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTG
T ss_pred ---cCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhccc
Confidence 000 012345778888999999999999999997 34443
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=5.7e-35 Score=308.21 Aligned_cols=235 Identities=12% Similarity=0.096 Sum_probs=178.8
Q ss_pred HhccccCccCceeEEEEEecCCceEEEEEecccC--------hhhHHHHHHHHHHHhccC---------CCCccceeEEE
Q 044996 372 ASAEILGSGCFGSSYKASLSTGAMMVVKRFKQMN--------NVGREEFQEHMRRLGRLR---------HPNLLPLVAYY 434 (678)
Q Consensus 372 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~---------H~niv~l~~~~ 434 (678)
...+.||+|+||+||+|+. +++.||||+++... ....+.+.+|++++++++ |||||++.+++
T Consensus 23 ~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~ 101 (336)
T 2vuw_A 23 QRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVH 101 (336)
T ss_dssp HTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEE
T ss_pred hheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhccee
Confidence 3467899999999999987 78999999997542 223478899999988885 88888877765
Q ss_pred E------------------------------eCCceEEEEeccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHH
Q 044996 435 Y------------------------------RKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQ 484 (678)
Q Consensus 435 ~------------------------------~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ 484 (678)
. ..+..|+||||+++|++.+.+... .+++.++..|+.||+.||+
T Consensus 102 ~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~------~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 102 CVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK------LSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTT------CCCHHHHHHHHHHHHHHHH
T ss_pred EecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhc------CCCHHHHHHHHHHHHHHHH
Confidence 3 157899999999999877666431 4899999999999999999
Q ss_pred HHH-HhCCCCCCcccCCCCCCEEecCCC--------------------ceEEeecCCccccCccccccccceeeCccccc
Q 044996 485 YLY-RELPSLIAPHGHIKSSNVLLNESL--------------------EPVLADYGLIPVMNQESAQELMIAYKSPEFLQ 543 (678)
Q Consensus 485 yLH-~~~~~~~ivHrdlk~~NILl~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~y~aPE~~~ 543 (678)
||| +. +|+||||||+|||++.++ .+||+|||+++..... ...+|..|+|||++.
T Consensus 176 ~lH~~~----~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-~~~gt~~y~aPE~~~ 250 (336)
T 2vuw_A 176 VAEASL----RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-IVVFCDVSMDEDLFT 250 (336)
T ss_dssp HHHHHH----CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-EEECCCCTTCSGGGC
T ss_pred HHHHhC----CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-cEEEeecccChhhhc
Confidence 999 77 799999999999999887 8999999999876543 346788999999998
Q ss_pred cCCCCCcchHHHHHHH-HHHHHhCCCCccccccCCCCCCChHHHHHHH---HhcCCccccccchhhhcccCCHHHHHHHH
Q 044996 544 LGRITKKTDVWSLGVL-ILEIMTGKFPANFLQQGKKADGDLASWVNSV---LANGDNRTEVFDKEMADERNSEGEMVKLL 619 (678)
Q Consensus 544 ~~~~t~ksDvwS~Gvv-l~el~tg~~P~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 619 (678)
+.. +.++||||++++ .+++++|..||.. ..|.... +............. ........+.
T Consensus 251 g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~s~~~~ 313 (336)
T 2vuw_A 251 GDG-DYQFDIYRLMKKENNNRWGEYHPYSN-----------VLWLHYLTDKMLKQMTFKTKCNTP-----AMKQIKRKIQ 313 (336)
T ss_dssp CCS-SHHHHHHHHHHHHHTTCTTSCCTHHH-----------HHHHHHHHHHHHHTCCCSSCCCSH-----HHHHHHHHHH
T ss_pred CCC-ccceehhhhhCCCCcccccccCCCcc-----------hhhhhHHHHhhhhhhccCcccchh-----hhhhcCHHHH
Confidence 655 899999998777 7888999999862 1232211 11110110000000 0123456688
Q ss_pred HHHhhcCccccccCCCHHHHH
Q 044996 620 KIGLACCEEEVEKRLDLKEAV 640 (678)
Q Consensus 620 ~l~~~Cl~~~P~~RPs~~ev~ 640 (678)
+++.+||+.| |+.|++
T Consensus 314 dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 314 EFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHhccC-----CHHHHH
Confidence 8899999866 888887
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=1.1e-29 Score=285.24 Aligned_cols=183 Identities=17% Similarity=0.077 Sum_probs=130.0
Q ss_pred cccCccCceeEEEEE-ecCCceEEEEEeccc----------ChhhHHHHHHHHHHHhcc-CCCCccceeEEEEeCCceEE
Q 044996 375 EILGSGCFGSSYKAS-LSTGAMMVVKRFKQM----------NNVGREEFQEHMRRLGRL-RHPNLLPLVAYYYRKEEKLL 442 (678)
Q Consensus 375 ~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~----------~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 442 (678)
...+.|++|.+..++ ...|+.+++|.+... .....++|.+|+++|+++ .|+||+++++++++++..||
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL 319 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL 319 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence 346778888777763 456889999998642 123456799999999999 79999999999999999999
Q ss_pred EEeccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCcc
Q 044996 443 VHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIP 522 (678)
Q Consensus 443 v~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 522 (678)
||||++||+|.++|.... +++. .+|+.||+.||+|+|++ +||||||||+||||++++.+||+|||+|+
T Consensus 320 VMEyv~G~~L~d~i~~~~-----~l~~---~~I~~QIl~AL~ylH~~----GIIHRDIKPeNILL~~dg~vKL~DFGlAr 387 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAAGE-----EIDR---EKILGSLLRSLAALEKQ----GFWHDDVRPWNVMVDARQHARLIDFGSIV 387 (569)
T ss_dssp EEECCCSEEHHHHHHTTC-----CCCH---HHHHHHHHHHHHHHHHT----TCEESCCCGGGEEECTTSCEEECCCTTEE
T ss_pred EEecCCCCcHHHHHHhCC-----CCCH---HHHHHHHHHHHHHHHHC----CceeccCchHhEEECCCCCEEEeecccCe
Confidence 999999999999998653 3554 35899999999999987 89999999999999999999999999998
Q ss_pred ccCccc----cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCc
Q 044996 523 VMNQES----AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPA 570 (678)
Q Consensus 523 ~~~~~~----~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~ 570 (678)
...... ...+|+.|||||++.+ .+..++|+||+|++++++.++..++
T Consensus 388 ~~~~~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 388 TTPQDCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp SCC---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred eCCCCCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 775432 2346889999999974 5778899999999998887765554
No 252
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.94 E-value=3.2e-26 Score=238.67 Aligned_cols=182 Identities=34% Similarity=0.605 Sum_probs=164.9
Q ss_pred ChHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCCCcceEEecC----CcEEEEEeCCCCcee--ecChHHhhcCCCCCEE
Q 044996 2 TDSQTLLTLKQSLSNPTALANWDDRTPPCNENGANWNGVLCHR----GKIWGLKLEDMGLQG--NIDITILKELREMRTL 75 (678)
Q Consensus 2 ~~~~aLl~~k~~l~~~~~l~~W~~~~~~c~~~~~~w~gv~C~~----~~v~~l~l~~~~l~g--~~~~~~l~~l~~L~~L 75 (678)
+|++||++||+++.+|..+++|..+++||. +.|.||+|+. ++|+.|+|+++++.| .+|. .+..|++|+.|
T Consensus 6 ~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~---~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~-~l~~l~~L~~L 81 (313)
T 1ogq_A 6 QDKQALLQIKKDLGNPTTLSSWLPTTDCCN---RTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPS-SLANLPYLNFL 81 (313)
T ss_dssp HHHHHHHHHHHHTTCCGGGTTCCTTSCTTT---TCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCG-GGGGCTTCSEE
T ss_pred HHHHHHHHHHHhcCCcccccCCCCCCCCCc---CCCcceEeCCCCCCceEEEEECCCCCccCCcccCh-hHhCCCCCCee
Confidence 588999999999988878899988778884 3599999974 799999999999999 8886 58999999999
Q ss_pred EccC-CcccccCCc-ccccCCCCccEEEcccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccC
Q 044996 76 SLMR-NNLEGPMPD-LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEG 153 (678)
Q Consensus 76 ~Ls~-N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~ 153 (678)
+|++ |++.|.+|. +..+ ++|++|+|++|+++|.+|.. |.++++|++|+|++|.++|.+|..+.++++|++|+|++
T Consensus 82 ~L~~~n~l~~~~p~~l~~l--~~L~~L~Ls~n~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 158 (313)
T 1ogq_A 82 YIGGINNLVGPIPPAIAKL--TQLHYLYITHTNVSGAIPDF-LSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDG 158 (313)
T ss_dssp EEEEETTEESCCCGGGGGC--TTCSEEEEEEECCEEECCGG-GGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred eCCCCCcccccCChhHhcC--CCCCEEECcCCeeCCcCCHH-HhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcC
Confidence 9995 999999994 6666 78999999999999999976 89999999999999999999999999999999999999
Q ss_pred CcccccCCcc--CCC-CCcEEEeecCcccccCchhhhcCC
Q 044996 154 NKFEGQIPDF--QQK-DLVSFNVSNNALFGSISPALRELD 190 (678)
Q Consensus 154 N~l~g~~p~~--~~~-~l~~l~l~~N~l~g~ip~~~~~l~ 190 (678)
|.++|.+|.. ... +|+.|++++|.++|.+|..+..+.
T Consensus 159 N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~ 198 (313)
T 1ogq_A 159 NRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN 198 (313)
T ss_dssp SCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC
T ss_pred CcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc
Confidence 9999999974 455 899999999999999999887654
No 253
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=2.3e-26 Score=256.74 Aligned_cols=178 Identities=13% Similarity=0.172 Sum_probs=143.9
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEecccC--------hhhHHHHHHHHHHHhccCCCCccceeEEEEeCCceEEEEe
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMN--------NVGREEFQEHMRRLGRLRHPNLLPLVAYYYRKEEKLLVHE 445 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 445 (678)
.++||+|+||.||+|.. .+..+++|+..... ....+.|.+|++++++++||||+++..++...+..+||||
T Consensus 341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 46899999999999954 56778888764321 1124568999999999999999977777778888999999
Q ss_pred ccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccC
Q 044996 446 FVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMN 525 (678)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 525 (678)
|+++|+|.+++.. +..|+.|++.||+|||+. +|+||||||+|||+++ .+||+|||+++...
T Consensus 420 ~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~~----gIiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 420 YINGKLAKDVIED-------------NLDIAYKIGEIVGKLHKN----DVIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp CCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHHT----TEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred CCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHHC----cCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 9999999999864 347999999999999976 7999999999999999 99999999998876
Q ss_pred ccc-----------cccccceeeCcccccc--CCCCCcchHHHHHHHHHHHHhCCCCcc
Q 044996 526 QES-----------AQELMIAYKSPEFLQL--GRITKKTDVWSLGVLILEIMTGKFPAN 571 (678)
Q Consensus 526 ~~~-----------~~~~~~~y~aPE~~~~--~~~t~ksDvwS~Gvvl~el~tg~~P~~ 571 (678)
... ...+|..|||||++.. ..|+.++|+|+..+-.++.+.++.+|.
T Consensus 481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 532 2346788999999976 568889999999999999988887763
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.90 E-value=3.7e-24 Score=250.21 Aligned_cols=176 Identities=24% Similarity=0.363 Sum_probs=138.7
Q ss_pred ChHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCCCcceEEecCCcEEEEEeCCCCceee---cCh---------------
Q 044996 2 TDSQTLLTLKQSLSNPTALANWDDRTPPCNENGANWNGVLCHRGKIWGLKLEDMGLQGN---IDI--------------- 63 (678)
Q Consensus 2 ~~~~aLl~~k~~l~~~~~l~~W~~~~~~c~~~~~~w~gv~C~~~~v~~l~l~~~~l~g~---~~~--------------- 63 (678)
+|++||++||+++.||..+++|+.+++|| .|.||+|+.++|+.|+|+++++.|. +|+
T Consensus 12 ~~~~all~~k~~~~~~~~l~~W~~~~~~C-----~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~ 86 (768)
T 3rgz_A 12 REIHQLISFKDVLPDKNLLPDWSSNKNPC-----TFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSN 86 (768)
T ss_dssp HHHHHHHHHHTTCSCTTSSTTCCTTSCGG-----GSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECTT
T ss_pred HHHHHHHHHHhhCCCcccccCCCCCCCCc-----CCcceEECCCcEEEEECCCCCcCCccCccChhHhccCcccccCCcC
Confidence 58999999999999887899998777888 6999999999999999999999998 654
Q ss_pred -------HHhhcCCCCCEEEccCCcccccCCc---ccccCCCCccEEEcccCccccccChhhhcCCcccceeeccccccc
Q 044996 64 -------TILKELREMRTLSLMRNNLEGPMPD---LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFN 133 (678)
Q Consensus 64 -------~~l~~l~~L~~L~Ls~N~l~g~~p~---~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~ 133 (678)
+.++.|++|++|+|++|.|+|.+|. +..+ ++|++|+|++|.++|.+|...+.++++|++|+|++|+++
T Consensus 87 ~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l--~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~ 164 (768)
T 3rgz_A 87 SHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSC--SGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSIS 164 (768)
T ss_dssp SCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGC--TTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCE
T ss_pred CCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCC--CCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccC
Confidence 2356677888888888888887764 4444 668888888888888777664477788888888888888
Q ss_pred cCCchh---hcCCCCCCeEeccCCcccccCCccCCCCCcEEEeecCcccccCch
Q 044996 134 GPIPES---LTRLSRLVELRLEGNKFEGQIPDFQQKDLVSFNVSNNALFGSISP 184 (678)
Q Consensus 134 g~~p~~---~~~l~~L~~l~l~~N~l~g~~p~~~~~~l~~l~l~~N~l~g~ip~ 184 (678)
+.+|.. +.++++|++|+|++|.++|.+|...+.+|+.|+|++|++++.+|.
T Consensus 165 ~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 218 (768)
T 3rgz_A 165 GANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF 218 (768)
T ss_dssp EETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB
T ss_pred CcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc
Confidence 777776 677777777777777777766666666777777777777776665
No 255
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.89 E-value=1.9e-23 Score=243.70 Aligned_cols=184 Identities=21% Similarity=0.350 Sum_probs=149.6
Q ss_pred ChHHHHHHHHhcCCCCCCCCCCCCCC-----CCCCCCCCCc------------ceEEec-CCcEEEEEeCCCCceeecCh
Q 044996 2 TDSQTLLTLKQSLSNPTALANWDDRT-----PPCNENGANW------------NGVLCH-RGKIWGLKLEDMGLQGNIDI 63 (678)
Q Consensus 2 ~~~~aLl~~k~~l~~~~~l~~W~~~~-----~~c~~~~~~w------------~gv~C~-~~~v~~l~l~~~~l~g~~~~ 63 (678)
+|++||++||+++.+| +|+.++ +|| +|+| .||+|+ .++|++|+|++++|.|.+|+
T Consensus 269 ~d~~ALl~~k~~l~~~----~W~~~~~~~~~~~~---~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip~ 341 (876)
T 4ecn_A 269 KDYKALKAIWEALDGK----NWRYYSGTINNTIH---SLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPD 341 (876)
T ss_dssp HHHHHHHHHHHHTTGG----GCCCCCSSCSSCCC---CCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEECG
T ss_pred HHHHHHHHHHHHcCCC----CCCcCCCcccccCC---ccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCch
Confidence 4899999999999876 897654 452 3589 999998 58999999999999999996
Q ss_pred HHhhcCCCCCEEEc-cCCccccc---------------------------------------------------------
Q 044996 64 TILKELREMRTLSL-MRNNLEGP--------------------------------------------------------- 85 (678)
Q Consensus 64 ~~l~~l~~L~~L~L-s~N~l~g~--------------------------------------------------------- 85 (678)
.+++|++|+.|+| ++|.++|.
T Consensus 342 -~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~ 420 (876)
T 4ecn_A 342 -AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKD 420 (876)
T ss_dssp -GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCC
T ss_pred -HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccc
Confidence 5999999999999 88888776
Q ss_pred -------------------CC-cccccCCCCccEEEcccCcccc-----------------ccChhhhc--CCcccceee
Q 044996 86 -------------------MP-DLRQLGNGALRSVYLSNNRFSG-----------------EIPTDAFD--GMTSLRKLL 126 (678)
Q Consensus 86 -------------------~p-~~~~~~~~~L~~L~Ls~N~l~G-----------------~ip~~~~~--~l~~L~~l~ 126 (678)
|| .+..+ ++|++|+|++|+|+| .||.. ++ ++++|++|+
T Consensus 421 ~~l~l~~l~l~~~~N~L~~IP~~l~~L--~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~-l~f~~L~~L~~L~ 497 (876)
T 4ecn_A 421 SRISLKDTQIGNLTNRITFISKAIQRL--TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEE-LSWSNLKDLTDVE 497 (876)
T ss_dssp CCCCCCTTTTTCCSCEEEEECGGGGGC--TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSC-CCGGGCTTCCEEE
T ss_pred cccchhhceeccccCcccchhHHHhcC--CCCCEEECcCCcCCCCcccccccccccccccccCChh-hhhccCCCCCEEE
Confidence 44 23444 678999999999988 48876 56 889999999
Q ss_pred ccccccccCCchhhcCCCCCCeEeccCCc-ccc-cCCcc---------CCCCCcEEEeecCcccccCch--hhhcCCC--
Q 044996 127 LADNQFNGPIPESLTRLSRLVELRLEGNK-FEG-QIPDF---------QQKDLVSFNVSNNALFGSISP--ALRELDP-- 191 (678)
Q Consensus 127 l~~N~~~g~~p~~~~~l~~L~~l~l~~N~-l~g-~~p~~---------~~~~l~~l~l~~N~l~g~ip~--~~~~l~~-- 191 (678)
|++|++.|.+|..|+++++|+.|+|++|+ |+| .+|.. ...+|+.|+|++|+|+ .||. .+.++..
T Consensus 498 Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~ 576 (876)
T 4ecn_A 498 LYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLG 576 (876)
T ss_dssp EESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCC
T ss_pred CcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCC
Confidence 99999999999889999999999999998 888 77752 2348889999999988 7887 6665443
Q ss_pred -CCCCCC
Q 044996 192 -SSFSGN 197 (678)
Q Consensus 192 -~~~~gn 197 (678)
..+.+|
T Consensus 577 ~L~Ls~N 583 (876)
T 4ecn_A 577 LLDCVHN 583 (876)
T ss_dssp EEECTTS
T ss_pred EEECCCC
Confidence 345555
No 256
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.88 E-value=1.1e-22 Score=232.48 Aligned_cols=178 Identities=22% Similarity=0.354 Sum_probs=148.2
Q ss_pred ChHHHHHHHHhcCCCCC---------CCCCCCCCCCCCCCCCCCc---ceEEec-CCcEEEEEeCCCCceeecChHHhhc
Q 044996 2 TDSQTLLTLKQSLSNPT---------ALANWDDRTPPCNENGANW---NGVLCH-RGKIWGLKLEDMGLQGNIDITILKE 68 (678)
Q Consensus 2 ~~~~aLl~~k~~l~~~~---------~l~~W~~~~~~c~~~~~~w---~gv~C~-~~~v~~l~l~~~~l~g~~~~~~l~~ 68 (678)
.|+.||.+||+++.++. ...+|+.+.++| .| .||+|+ .++|++|+|+++++.|.+|+ .+++
T Consensus 30 ~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c-----~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~-~l~~ 103 (636)
T 4eco_A 30 KDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELD-----MWGAQPGVSLNSNGRVTGLSLEGFGASGRVPD-AIGQ 103 (636)
T ss_dssp HHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGG-----GTTCCTTEEECTTCCEEEEECTTSCCEEEECG-GGGG
T ss_pred HHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcc-----cccCCCCeEEcCCCCEEEEEecCcccCCcCCh-HHhc
Confidence 48899999999987542 234899887777 69 999997 58999999999999999996 5999
Q ss_pred CCCCCEEEccCCcc------------------------------------------------------------------
Q 044996 69 LREMRTLSLMRNNL------------------------------------------------------------------ 82 (678)
Q Consensus 69 l~~L~~L~Ls~N~l------------------------------------------------------------------ 82 (678)
|++|+.|+|++|++
T Consensus 104 L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l 183 (636)
T 4eco_A 104 LTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITL 183 (636)
T ss_dssp CTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCC
T ss_pred CccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccch
Confidence 99999999999844
Q ss_pred ------------cccCC-cccccCCCCccEEEcccCccccc-----------------cChhhhc--CCcccceeecccc
Q 044996 83 ------------EGPMP-DLRQLGNGALRSVYLSNNRFSGE-----------------IPTDAFD--GMTSLRKLLLADN 130 (678)
Q Consensus 83 ------------~g~~p-~~~~~~~~~L~~L~Ls~N~l~G~-----------------ip~~~~~--~l~~L~~l~l~~N 130 (678)
+| || .+..+ ++|++|+|++|+|+|. ||.. ++ ++++|++|+|++|
T Consensus 184 ~~l~l~~~~n~l~~-ip~~l~~l--~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~-l~~~~l~~L~~L~L~~n 259 (636)
T 4eco_A 184 KDTQIGQLSNNITF-VSKAVMRL--TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTED-LKWDNLKDLTDVEVYNC 259 (636)
T ss_dssp CTTTTTCCSCEEEE-ECGGGGGC--TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSC-CCGGGCTTCCEEEEECC
T ss_pred hhhhhccccCCCcc-CCHHHhcc--cCCCEEECcCCccccccccccccccccchhcccCchh-hhhcccCCCCEEEecCC
Confidence 45 55 35555 6799999999999986 8876 77 8999999999999
Q ss_pred ccccCCchhhcCCCCCCeEeccCCc-ccc-cCCcc--C------CCCCcEEEeecCcccccCch--hhhcCC
Q 044996 131 QFNGPIPESLTRLSRLVELRLEGNK-FEG-QIPDF--Q------QKDLVSFNVSNNALFGSISP--ALRELD 190 (678)
Q Consensus 131 ~~~g~~p~~~~~l~~L~~l~l~~N~-l~g-~~p~~--~------~~~l~~l~l~~N~l~g~ip~--~~~~l~ 190 (678)
++.|.+|..|+++++|++|+|++|. |+| .+|.. . +++|+.|++++|+++ .+|. .+.++.
T Consensus 260 ~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~ 330 (636)
T 4eco_A 260 PNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMK 330 (636)
T ss_dssp TTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCT
T ss_pred cCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCC
Confidence 9999999999999999999999998 988 78863 2 278888888888888 7887 666544
No 257
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=7.5e-23 Score=209.43 Aligned_cols=140 Identities=16% Similarity=0.203 Sum_probs=114.5
Q ss_pred ccccCccCceeEEEEEecCCceEEEEEecccCh------------------hhHHHHHHHHHHHhccCCCCccceeEEEE
Q 044996 374 AEILGSGCFGSSYKASLSTGAMMVVKRFKQMNN------------------VGREEFQEHMRRLGRLRHPNLLPLVAYYY 435 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~e~~~l~~l~H~niv~l~~~~~ 435 (678)
.+.||+|+||.||+|...+|+.||+|.++.... .....+.+|+++|++++ | +++.+++.
T Consensus 95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~ 171 (282)
T 1zar_A 95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA 171 (282)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE
T ss_pred cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe
Confidence 478999999999999987799999999864221 13567899999999999 5 66766554
Q ss_pred eCCceEEEEeccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEE
Q 044996 436 RKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVL 515 (678)
Q Consensus 436 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl 515 (678)
.+..++||||+++|+|.+ +.. .....++.||+.||.|||+. +|+||||||+|||++ ++.+||
T Consensus 172 -~~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH~~----giiHrDlkp~NILl~-~~~vkl 233 (282)
T 1zar_A 172 -WEGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFYHR----GIVHGDLSQYNVLVS-EEGIWI 233 (282)
T ss_dssp -EETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHHHT----TEECSCCSTTSEEEE-TTEEEE
T ss_pred -ccceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHHHC----CCEeCCCCHHHEEEE-CCcEEE
Confidence 356799999999999987 421 23457999999999999976 899999999999999 999999
Q ss_pred eecCCccccCccccccccceeeCccccc
Q 044996 516 ADYGLIPVMNQESAQELMIAYKSPEFLQ 543 (678)
Q Consensus 516 ~DfGla~~~~~~~~~~~~~~y~aPE~~~ 543 (678)
+|||+++... .|+|||++.
T Consensus 234 ~DFG~a~~~~---------~~~a~e~l~ 252 (282)
T 1zar_A 234 IDFPQSVEVG---------EEGWREILE 252 (282)
T ss_dssp CCCTTCEETT---------STTHHHHHH
T ss_pred EECCCCeECC---------CCCHHHHHH
Confidence 9999986432 467888875
No 258
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.85 E-value=1.2e-21 Score=229.07 Aligned_cols=165 Identities=33% Similarity=0.508 Sum_probs=142.4
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-cccc-------------------------------
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQL------------------------------- 92 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~------------------------------- 92 (678)
.++..|+|++|.+.|.+|. .++.+++|+.|+|++|.++|.+|. +...
T Consensus 514 ~~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (768)
T 3rgz_A 514 ENLAILKLSNNSFSGNIPA-ELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGN 592 (768)
T ss_dssp TTCCEEECCSSCCEEECCG-GGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEE
T ss_pred CCCCEEECCCCcccCcCCH-HHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccccccc
Confidence 3577888888888888885 488899999999999999988883 1110
Q ss_pred -------------------------------------CCCCccEEEcccCccccccChhhhcCCcccceeeccccccccC
Q 044996 93 -------------------------------------GNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGP 135 (678)
Q Consensus 93 -------------------------------------~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~ 135 (678)
...+|++|||++|+|+|.||.+ |+++++|+.|+|++|+|+|.
T Consensus 593 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~-l~~l~~L~~L~Ls~N~l~g~ 671 (768)
T 3rgz_A 593 LLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKE-IGSMPYLFILNLGHNDISGS 671 (768)
T ss_dssp EEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGG-GGGCTTCCEEECCSSCCCSC
T ss_pred ccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHH-HhccccCCEEeCcCCccCCC
Confidence 0145889999999999999987 89999999999999999999
Q ss_pred CchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccccCchh--hhcCCCCCCCCCCCCCCCCCCCCCCC
Q 044996 136 IPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGSISPA--LRELDPSSFSGNRDLCGEPLGSPCPT 211 (678)
Q Consensus 136 ~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ip~~--~~~l~~~~~~gn~~lc~~~~~~~c~~ 211 (678)
||.+|+++++|+.|+|++|+|+|.+|.. .++.|+.|+|++|+|+|.||.. +..++...|.||++|||.++. +|..
T Consensus 672 ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~ 750 (768)
T 3rgz_A 672 IPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDP 750 (768)
T ss_dssp CCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCS
T ss_pred CChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCC
Confidence 9999999999999999999999999985 6789999999999999999974 677888899999999998876 7864
Q ss_pred C
Q 044996 212 P 212 (678)
Q Consensus 212 ~ 212 (678)
.
T Consensus 751 ~ 751 (768)
T 3rgz_A 751 S 751 (768)
T ss_dssp C
T ss_pred C
Confidence 3
No 259
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.80 E-value=2e-20 Score=196.08 Aligned_cols=183 Identities=20% Similarity=0.323 Sum_probs=152.8
Q ss_pred ChHHHHHHHHhcCC-CCC-CCCCCC----CCCCCCCCCCCCcceEEec----------CCcEEEEEeCCCCceeecChHH
Q 044996 2 TDSQTLLTLKQSLS-NPT-ALANWD----DRTPPCNENGANWNGVLCH----------RGKIWGLKLEDMGLQGNIDITI 65 (678)
Q Consensus 2 ~~~~aLl~~k~~l~-~~~-~l~~W~----~~~~~c~~~~~~w~gv~C~----------~~~v~~l~l~~~~l~g~~~~~~ 65 (678)
+|++||++||..+. |+. .+.+|. ...++| .|.|+.|. ..+|+.|+|+++++. .+|..
T Consensus 27 ~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~-----~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~- 99 (328)
T 4fcg_A 27 PYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIE-----TRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQ- 99 (328)
T ss_dssp CHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSC-----CSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSC-
T ss_pred hHHHHHHHHHHhccCCchhhhhhhccccccccccc-----ccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChh-
Confidence 58899999999884 553 357783 334455 79999994 278999999999998 88865
Q ss_pred hhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcccCccccccChhhhcCCcccceeeccccccccCCchhhcC--
Q 044996 66 LKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTR-- 142 (678)
Q Consensus 66 l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~-- 142 (678)
++.|++|+.|+|++|.++ .+|. +..+ ++|++|+|++|+|+ .||.. |+++++|++|+|++|++.+.+|..++.
T Consensus 100 l~~l~~L~~L~L~~n~l~-~lp~~~~~l--~~L~~L~Ls~n~l~-~lp~~-l~~l~~L~~L~L~~n~~~~~~p~~~~~~~ 174 (328)
T 4fcg_A 100 AFRLSHLQHMTIDAAGLM-ELPDTMQQF--AGLETLTLARNPLR-ALPAS-IASLNRLRELSIRACPELTELPEPLASTD 174 (328)
T ss_dssp GGGGTTCSEEEEESSCCC-CCCSCGGGG--TTCSEEEEESCCCC-CCCGG-GGGCTTCCEEEEEEETTCCCCCSCSEEEC
T ss_pred hhhCCCCCEEECCCCCcc-chhHHHhcc--CCCCEEECCCCccc-cCcHH-HhcCcCCCEEECCCCCCccccChhHhhcc
Confidence 778999999999999999 7774 6666 77999999999999 89977 899999999999999999999998775
Q ss_pred -------CCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccccCchhhhcCC---CCCCCCCC
Q 044996 143 -------LSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGSISPALRELD---PSSFSGNR 198 (678)
Q Consensus 143 -------l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ip~~~~~l~---~~~~~gn~ 198 (678)
+++|++|+|++|.|+ .+|.. .+++|+.|+|++|.+++ +|..+..+. ...+.+|.
T Consensus 175 ~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~ 240 (328)
T 4fcg_A 175 ASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCT 240 (328)
T ss_dssp -CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCT
T ss_pred chhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCc
Confidence 999999999999999 88874 67899999999999996 666665543 34566654
No 260
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.77 E-value=6.1e-19 Score=178.09 Aligned_cols=134 Identities=17% Similarity=0.214 Sum_probs=104.4
Q ss_pred ccccCccCceeEEEEEe-cCCce--EEEEEecccCh------------------------hhHHHHHHHHHHHhccCCCC
Q 044996 374 AEILGSGCFGSSYKASL-STGAM--MVVKRFKQMNN------------------------VGREEFQEHMRRLGRLRHPN 426 (678)
Q Consensus 374 ~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~------------------------~~~~~~~~e~~~l~~l~H~n 426 (678)
.+.||+|+||.||+|.. .+|+. ||||.++.... .....+.+|++.|.+++|++
T Consensus 52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 131 (258)
T 1zth_A 52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAG 131 (258)
T ss_dssp EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCC
Confidence 46799999999999987 78888 99998754211 11236889999999999886
Q ss_pred c--cceeEEEEeCCceEEEEeccCC-C----CHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHH-HhCCCCCCccc
Q 044996 427 L--LPLVAYYYRKEEKLLVHEFVPK-R----SLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLY-RELPSLIAPHG 498 (678)
Q Consensus 427 i--v~l~~~~~~~~~~~lv~Ey~~~-g----sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~~ivHr 498 (678)
| ..++++ +..+|||||+.+ | +|.++... .++..+..++.|++.||.||| .. +|+||
T Consensus 132 i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~~~----givHr 195 (258)
T 1zth_A 132 VSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQEA----ELVHA 195 (258)
T ss_dssp CCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHHTS----CEECS
T ss_pred CCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHHHC----CEEeC
Confidence 5 333432 367899999942 4 67665432 234567899999999999999 55 79999
Q ss_pred CCCCCCEEecCCCceEEeecCCccccC
Q 044996 499 HIKSSNVLLNESLEPVLADYGLIPVMN 525 (678)
Q Consensus 499 dlk~~NILl~~~~~~kl~DfGla~~~~ 525 (678)
||||+|||+++ .+||+|||++....
T Consensus 196 Dlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 196 DLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp SCSTTSEEESS--SEEECCCTTCEETT
T ss_pred CCCHHHEEEcC--cEEEEECcccccCC
Confidence 99999999998 99999999987653
No 261
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.76 E-value=1.1e-18 Score=181.45 Aligned_cols=160 Identities=29% Similarity=0.476 Sum_probs=100.6
Q ss_pred cEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcccCccccccChh----------
Q 044996 46 KIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSNNRFSGEIPTD---------- 114 (678)
Q Consensus 46 ~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~---------- 114 (678)
++..|+|++|.+.|.+|. .+..+++|+.|+|++|+++|.+|. +..+. .+|++|+|++|+++|.+|..
T Consensus 126 ~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~ 203 (313)
T 1ogq_A 126 TLVTLDFSYNALSGTLPP-SISSLPNLVGITFDGNRISGAIPDSYGSFS-KLFTSMTISRNRLTGKIPPTFANLNLAFVD 203 (313)
T ss_dssp TCCEEECCSSEEESCCCG-GGGGCTTCCEEECCSSCCEEECCGGGGCCC-TTCCEEECCSSEEEEECCGGGGGCCCSEEE
T ss_pred CCCEEeCCCCccCCcCCh-HHhcCCCCCeEECcCCcccCcCCHHHhhhh-hcCcEEECcCCeeeccCChHHhCCcccEEE
Confidence 566677777777766664 366677777777777777766663 33331 14555555555555555433
Q ss_pred ------------hhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccc
Q 044996 115 ------------AFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFG 180 (678)
Q Consensus 115 ------------~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g 180 (678)
.|..+++|+.|+|++|.+++.+|. +..+++|++|+|++|.|+|.+|.. .+++|+.|+|++|+|+|
T Consensus 204 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 282 (313)
T 1ogq_A 204 LSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCG 282 (313)
T ss_dssp CCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEE
T ss_pred CcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccc
Confidence 245555555555555555554444 555666666666666666666653 45677778888888877
Q ss_pred cCchh--hhcCCCCCCCCCCCCCCCCCCCCC
Q 044996 181 SISPA--LRELDPSSFSGNRDLCGEPLGSPC 209 (678)
Q Consensus 181 ~ip~~--~~~l~~~~~~gn~~lc~~~~~~~c 209 (678)
.+|.. +.++....+.+|+++||.++. +|
T Consensus 283 ~ip~~~~l~~L~~l~l~~N~~lc~~p~~-~C 312 (313)
T 1ogq_A 283 EIPQGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp ECCCSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred cCCCCccccccChHHhcCCCCccCCCCC-CC
Confidence 77753 445666778999999987664 45
No 262
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.72 E-value=1.8e-17 Score=166.60 Aligned_cols=153 Identities=27% Similarity=0.385 Sum_probs=128.5
Q ss_pred cEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcccCccccccChhhhcCCcccce
Q 044996 46 KIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRK 124 (678)
Q Consensus 46 ~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~ 124 (678)
.+..|+|++|++.+.. +..+..+++|+.|+|++|.|++..|. +..+ ++|++|+|++|+|+ .+|+..|..+++|++
T Consensus 36 ~l~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~ 111 (251)
T 3m19_A 36 DTEKLDLQSTGLATLS-DATFRGLTKLTWLNLDYNQLQTLSAGVFDDL--TELGTLGLANNQLA-SLPLGVFDHLTQLDK 111 (251)
T ss_dssp TCCEEECTTSCCCCCC-TTTTTTCTTCCEEECTTSCCCCCCTTTTTTC--TTCCEEECTTSCCC-CCCTTTTTTCTTCCE
T ss_pred CCCEEEccCCCcCccC-HhHhcCcccCCEEECCCCcCCccCHhHhccC--CcCCEEECCCCccc-ccChhHhcccCCCCE
Confidence 4778999999998644 45689999999999999999997774 4555 78999999999999 566666899999999
Q ss_pred eeccccccccCCchhhcCCCCCCeEeccCCcccccCCc-c-CCCCCcEEEeecCcccccCchhhh---cCCCCCCCCCCC
Q 044996 125 LLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPD-F-QQKDLVSFNVSNNALFGSISPALR---ELDPSSFSGNRD 199 (678)
Q Consensus 125 l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~-~-~~~~l~~l~l~~N~l~g~ip~~~~---~l~~~~~~gn~~ 199 (678)
|+|++|++++..+..|..+++|++|+|++|.|++..+. + .+.+|+.|+|++|+|++..+..+. ++....+.+|++
T Consensus 112 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 191 (251)
T 3m19_A 112 LYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191 (251)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCB
T ss_pred EEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCce
Confidence 99999999987777789999999999999999976664 2 568999999999999987665555 445567889988
Q ss_pred CCC
Q 044996 200 LCG 202 (678)
Q Consensus 200 lc~ 202 (678)
.|.
T Consensus 192 ~c~ 194 (251)
T 3m19_A 192 DCS 194 (251)
T ss_dssp CTT
T ss_pred eCC
Confidence 774
No 263
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.70 E-value=4.3e-17 Score=160.38 Aligned_cols=146 Identities=20% Similarity=0.278 Sum_probs=106.9
Q ss_pred CCcceEEecCC-----------cEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCC-cccccCCCCccEEEc
Q 044996 35 ANWNGVLCHRG-----------KIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMP-DLRQLGNGALRSVYL 102 (678)
Q Consensus 35 ~~w~gv~C~~~-----------~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~~~~~~L~~L~L 102 (678)
|.|..+.|+.. .+..|+|++|.+.+..+...+..+++|+.|+|++|++++..+ .+..+ .+|++|+|
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l--~~L~~L~L 88 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA--SGVNEILL 88 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTC--TTCCEEEC
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCC--CCCCEEEC
Confidence 57888888531 356778888888766555557778888888888888877666 35555 66888888
Q ss_pred ccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccc
Q 044996 103 SNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFG 180 (678)
Q Consensus 103 s~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g 180 (678)
++|+|++ +|+..|.++++|++|+|++|++++..|..|..+++|++|+|++|+|++..|.. .+.+|+.|+|++|.|++
T Consensus 89 s~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 89 TSNRLEN-VQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp CSSCCCC-CCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CCCccCc-cCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 8888874 44455778888888888888888777777888888888888888888766653 45678888888888776
Q ss_pred cCc
Q 044996 181 SIS 183 (678)
Q Consensus 181 ~ip 183 (678)
..+
T Consensus 168 ~c~ 170 (220)
T 2v70_A 168 NCY 170 (220)
T ss_dssp SGG
T ss_pred CCc
Confidence 554
No 264
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.69 E-value=1e-16 Score=158.68 Aligned_cols=153 Identities=20% Similarity=0.265 Sum_probs=103.2
Q ss_pred CCCCCCCCCCCCCCCCcceEEecC-----------CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-
Q 044996 21 ANWDDRTPPCNENGANWNGVLCHR-----------GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD- 88 (678)
Q Consensus 21 ~~W~~~~~~c~~~~~~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~- 88 (678)
.-|......| +|.+|.|+. ..+..|+|++|.+.+..+ ..+..+++|+.|+|++|+|.+..+.
T Consensus 10 ~~~~~~~~~C-----s~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~L~~N~l~~i~~~~ 83 (229)
T 3e6j_A 10 SAACPSQCSC-----SGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEP-GVFDSLINLKELYLGSNQLGALPVGV 83 (229)
T ss_dssp -CCCCTTCEE-----ETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCT-TTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred hccCCCCCEE-----eCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCH-HHhhCccCCcEEECCCCCCCCcChhh
Confidence 3455555666 699999963 246677777777775444 4567777777777777777554433
Q ss_pred ccccCCCCccEEEcccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCC
Q 044996 89 LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQK 166 (678)
Q Consensus 89 ~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~ 166 (678)
+..+ ++|++|+|++|+|+ .+|+..|..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++..+.. .+.
T Consensus 84 ~~~l--~~L~~L~Ls~N~l~-~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 159 (229)
T 3e6j_A 84 FDSL--TQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLS 159 (229)
T ss_dssp TTTC--TTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCT
T ss_pred cccC--CCcCEEECCCCcCC-ccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCC
Confidence 3334 56777777777777 455555677777777777777777 67777777777777777777777544432 456
Q ss_pred CCcEEEeecCcccccCc
Q 044996 167 DLVSFNVSNNALFGSIS 183 (678)
Q Consensus 167 ~l~~l~l~~N~l~g~ip 183 (678)
+|+.|+|++|.+.+..+
T Consensus 160 ~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 160 SLTHAYLFGNPWDCECR 176 (229)
T ss_dssp TCCEEECTTSCBCTTBG
T ss_pred CCCEEEeeCCCccCCcc
Confidence 77777777777776544
No 265
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.69 E-value=1.1e-16 Score=155.96 Aligned_cols=145 Identities=23% Similarity=0.315 Sum_probs=118.7
Q ss_pred CCcceEEecC-----------CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEc
Q 044996 35 ANWNGVLCHR-----------GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYL 102 (678)
Q Consensus 35 ~~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~L 102 (678)
|.|.+|.|.. .+++.|+|++|.+. .+++..+..+++|+.|+|++|++++..+. +..+ ++|++|+|
T Consensus 7 C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~L 83 (208)
T 2o6s_A 7 CSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLK-SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKL--TSLTYLNL 83 (208)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTC--TTCCEEEC
T ss_pred ECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccC-cCChhhhcccccCcEEECCCCccCccChhhcCCC--CCcCEEEC
Confidence 5899999963 25888999999998 56666688899999999999999876554 3445 77999999
Q ss_pred ccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccc
Q 044996 103 SNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFG 180 (678)
Q Consensus 103 s~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g 180 (678)
++|+|+ .+|+..|.++++|++|+|++|++++..+..+.++++|++|+|++|.|++..+.. ...+|+.|++++|.+.+
T Consensus 84 s~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 162 (208)
T 2o6s_A 84 STNQLQ-SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 162 (208)
T ss_dssp CSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC
T ss_pred CCCcCC-ccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec
Confidence 999999 566666889999999999999999877777899999999999999998655542 56789999999988877
Q ss_pred cCc
Q 044996 181 SIS 183 (678)
Q Consensus 181 ~ip 183 (678)
..|
T Consensus 163 ~~~ 165 (208)
T 2o6s_A 163 TCP 165 (208)
T ss_dssp CTT
T ss_pred CCC
Confidence 665
No 266
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.68 E-value=1.4e-16 Score=156.60 Aligned_cols=142 Identities=25% Similarity=0.375 Sum_probs=92.4
Q ss_pred CCcceEEecC-----------CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEc
Q 044996 35 ANWNGVLCHR-----------GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYL 102 (678)
Q Consensus 35 ~~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~L 102 (678)
|.|..|.|.. ..++.|+|++|++.+ +++..+..+++|+.|+|++|++++..|. +..+ .+|++|+|
T Consensus 11 C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~-i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l--~~L~~L~L 87 (220)
T 2v9t_B 11 CSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKV-IPPGAFSPYKKLRRIDLSNNQISELAPDAFQGL--RSLNSLVL 87 (220)
T ss_dssp EETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCE-ECTTSSTTCTTCCEEECCSSCCCEECTTTTTTC--SSCCEEEC
T ss_pred ECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCC-cCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCC--cCCCEEEC
Confidence 5788888853 146667777776663 4444566677777777777777666553 4444 55777777
Q ss_pred ccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccc
Q 044996 103 SNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFG 180 (678)
Q Consensus 103 s~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g 180 (678)
++|+|+ .||+..|.++++|+.|+|++|++++..|..|..+++|++|+|++|.|++..+.. .+.+|+.|+|++|.|..
T Consensus 88 s~N~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 88 YGNKIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCcCC-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 777776 566555666777777777777777666666777777777777777776555432 34566777777766653
No 267
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.66 E-value=1.8e-16 Score=168.22 Aligned_cols=164 Identities=21% Similarity=0.226 Sum_probs=136.6
Q ss_pred CCcceEEecC-----------CcEEEEEeCCCCceeecChHHhh-cCCCCCEEEccCCcccccCCc-ccccCCCCccEEE
Q 044996 35 ANWNGVLCHR-----------GKIWGLKLEDMGLQGNIDITILK-ELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVY 101 (678)
Q Consensus 35 ~~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~~~~l~-~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~ 101 (678)
|.|.-|.|.. ..+..|+|++|.|.+ +++..+. .+++|+.|+|++|+|++..|. +..+ ++|++|+
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~-l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l--~~L~~L~ 94 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSR-LRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPV--PNLRYLD 94 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCE-ECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTC--TTCCEEE
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCc-cChhhhhhcccccCEEECCCCcCCccChhhccCC--CCCCEEE
Confidence 5788899953 247789999999985 5555676 899999999999999988774 5555 7899999
Q ss_pred cccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc------CCCCCcEEEeec
Q 044996 102 LSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF------QQKDLVSFNVSN 175 (678)
Q Consensus 102 Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~------~~~~l~~l~l~~ 175 (678)
|++|+|+ .+|+..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|.|++ +|.. .+.+|+.|+|++
T Consensus 95 Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~~~~l~~L~~L~L~~ 172 (361)
T 2xot_A 95 LSSNHLH-TLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR-FPVELIKDGNKLPKLMLLDLSS 172 (361)
T ss_dssp CCSSCCC-EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS-CCGGGTC----CTTCCEEECCS
T ss_pred CCCCcCC-cCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe-eCHHHhcCcccCCcCCEEECCC
Confidence 9999999 5666669999999999999999999999999999999999999999996 5542 368999999999
Q ss_pred CcccccCchhhhcC-----CCCCCCCCCCCCCC
Q 044996 176 NALFGSISPALREL-----DPSSFSGNRDLCGE 203 (678)
Q Consensus 176 N~l~g~ip~~~~~l-----~~~~~~gn~~lc~~ 203 (678)
|+|++..+..+..+ ....+.+|++.|.+
T Consensus 173 N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 173 NKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp SCCCCCCHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred CCCCccCHHHhhhccHhhcceEEecCCCccCCc
Confidence 99986554556555 34678999998864
No 268
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.66 E-value=6.1e-17 Score=155.70 Aligned_cols=149 Identities=25% Similarity=0.356 Sum_probs=116.5
Q ss_pred EEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc--ccccCCCCccEEEcccCccccccChhhhcCCcccceee
Q 044996 49 GLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD--LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLL 126 (678)
Q Consensus 49 ~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~--~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~ 126 (678)
.+++++++|. .+|..+ ..+|+.|+|++|++++..+. +..+ ++|++|+|++|+|++.+|.. |.++++|++|+
T Consensus 12 ~l~~s~~~l~-~ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L~ 84 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPRDI---PLHTTELLLNDNELGRISSDGLFGRL--PHLVKLELKRNQLTGIEPNA-FEGASHIQELQ 84 (192)
T ss_dssp EEECTTSCCS-SCCSCC---CTTCSEEECCSCCCCSBCCSCSGGGC--TTCCEEECCSSCCCCBCTTT-TTTCTTCCEEE
T ss_pred EEEcCCCCcC-cCccCC---CCCCCEEECCCCcCCccCCccccccC--CCCCEEECCCCCCCCcCHhH-cCCcccCCEEE
Confidence 3455666774 677532 23899999999999988774 5666 77999999999999776755 89999999999
Q ss_pred ccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccccCchh-hh-cCCCCCCCCCCCCCC
Q 044996 127 LADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGSISPA-LR-ELDPSSFSGNRDLCG 202 (678)
Q Consensus 127 l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ip~~-~~-~l~~~~~~gn~~lc~ 202 (678)
|++|+|++..|..|.++++|++|+|++|+|++.+|.. .+.+|+.|+|++|.|++..+.. +. .+....+.++...|+
T Consensus 85 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~ 164 (192)
T 1w8a_A 85 LGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCG 164 (192)
T ss_dssp CCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBC
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCC
Confidence 9999999999988999999999999999999988874 5679999999999999887632 21 122223445555665
Q ss_pred CC
Q 044996 203 EP 204 (678)
Q Consensus 203 ~~ 204 (678)
.|
T Consensus 165 ~P 166 (192)
T 1w8a_A 165 AP 166 (192)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 269
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.65 E-value=5.6e-16 Score=152.37 Aligned_cols=155 Identities=20% Similarity=0.260 Sum_probs=129.0
Q ss_pred eEEecCCcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc--ccccCCCCccEEEcccCccccccChhhh
Q 044996 39 GVLCHRGKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD--LRQLGNGALRSVYLSNNRFSGEIPTDAF 116 (678)
Q Consensus 39 gv~C~~~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~--~~~~~~~~L~~L~Ls~N~l~G~ip~~~~ 116 (678)
+-.|.. ..++++++.|. .+|..+ ...++.|+|++|+|++..|. +..+ ++|++|+|++|+|++ +++..|
T Consensus 8 ~C~C~~---~~l~~s~n~l~-~iP~~~---~~~~~~L~L~~N~l~~~~~~~~~~~l--~~L~~L~L~~N~i~~-i~~~~~ 77 (220)
T 2v70_A 8 KCRCEG---TTVDCSNQKLN-KIPEHI---PQYTAELRLNNNEFTVLEATGIFKKL--PQLRKINFSNNKITD-IEEGAF 77 (220)
T ss_dssp TCEEET---TEEECCSSCCS-SCCSCC---CTTCSEEECCSSCCCEECCCCCGGGC--TTCCEEECCSSCCCE-ECTTTT
T ss_pred CCEECC---CEeEeCCCCcc-cCccCC---CCCCCEEEcCCCcCCccCchhhhccC--CCCCEEECCCCcCCE-ECHHHh
Confidence 345643 37999999997 577532 34578999999999998763 5556 789999999999995 555559
Q ss_pred cCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccccCchhhhcC---CC
Q 044996 117 DGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGSISPALREL---DP 191 (678)
Q Consensus 117 ~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ip~~~~~l---~~ 191 (678)
.++++|++|+|++|++++..|..|..+++|++|+|++|.|++..|.. .+.+|+.|+|++|+|++..|..+..+ ..
T Consensus 78 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 157 (220)
T 2v70_A 78 EGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLST 157 (220)
T ss_dssp TTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCE
T ss_pred CCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCE
Confidence 99999999999999999988889999999999999999999887764 56899999999999999888777654 45
Q ss_pred CCCCCCCCCCCC
Q 044996 192 SSFSGNRDLCGE 203 (678)
Q Consensus 192 ~~~~gn~~lc~~ 203 (678)
..+.+|++.|..
T Consensus 158 L~L~~N~l~c~c 169 (220)
T 2v70_A 158 LNLLANPFNCNC 169 (220)
T ss_dssp EECCSCCEECSG
T ss_pred EEecCcCCcCCC
Confidence 578999988854
No 270
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.63 E-value=2.1e-15 Score=153.42 Aligned_cols=153 Identities=25% Similarity=0.295 Sum_probs=128.7
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcccCccccccChhhhcCCcccc
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLR 123 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~ 123 (678)
.++..|+|++|.+.+ ++ .+..+++|+.|+|++|.+++..+. +..+ ++|++|+|++|++++ +|+..|+++++|+
T Consensus 63 ~~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~L~~n~l~~-~~~~~~~~l~~L~ 136 (272)
T 3rfs_A 63 PNVRYLALGGNKLHD-IS--ALKELTNLTYLILTGNQLQSLPNGVFDKL--TNLKELVLVENQLQS-LPDGVFDKLTNLT 136 (272)
T ss_dssp TTCCEEECTTSCCCC-CG--GGTTCTTCCEEECTTSCCCCCCTTTTTTC--TTCCEEECTTSCCCC-CCTTTTTTCTTCC
T ss_pred CCCcEEECCCCCCCC-ch--hhcCCCCCCEEECCCCccCccChhHhcCC--cCCCEEECCCCcCCc-cCHHHhccCCCCC
Confidence 578999999999986 43 588999999999999999987774 4555 789999999999995 5555589999999
Q ss_pred eeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccccCchhhh---cCCCCCCCCCC
Q 044996 124 KLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGSISPALR---ELDPSSFSGNR 198 (678)
Q Consensus 124 ~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ip~~~~---~l~~~~~~gn~ 198 (678)
+|+|++|++++..|..++.+++|++|+|++|.|++..|.. .+++|+.|++++|.+++..|..+. ++....+.+|+
T Consensus 137 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 216 (272)
T 3rfs_A 137 YLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNP 216 (272)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCC
Confidence 9999999999888888899999999999999999766653 578999999999999987776554 44556788898
Q ss_pred CCCCC
Q 044996 199 DLCGE 203 (678)
Q Consensus 199 ~lc~~ 203 (678)
+.|..
T Consensus 217 ~~~~~ 221 (272)
T 3rfs_A 217 WDCTC 221 (272)
T ss_dssp BCCCT
T ss_pred ccccC
Confidence 87753
No 271
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.63 E-value=1.9e-15 Score=149.55 Aligned_cols=156 Identities=23% Similarity=0.281 Sum_probs=128.5
Q ss_pred cceEEecCCcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcccCccccccChhh
Q 044996 37 WNGVLCHRGKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSNNRFSGEIPTDA 115 (678)
Q Consensus 37 w~gv~C~~~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~~ 115 (678)
|..-.|+. +.++++++++. .+|..+ .++|+.|+|++|++++..|. +..+ .+|++|+|++|+|+ .+|+..
T Consensus 14 ~~~~~Cs~---~~v~c~~~~l~-~ip~~~---~~~L~~L~Ls~n~i~~~~~~~~~~l--~~L~~L~L~~N~l~-~i~~~~ 83 (229)
T 3e6j_A 14 PSQCSCSG---TTVDCRSKRHA-SVPAGI---PTNAQILYLHDNQITKLEPGVFDSL--INLKELYLGSNQLG-ALPVGV 83 (229)
T ss_dssp CTTCEEET---TEEECTTSCCS-SCCSCC---CTTCSEEECCSSCCCCCCTTTTTTC--TTCCEEECCSSCCC-CCCTTT
T ss_pred CCCCEEeC---CEeEccCCCcC-ccCCCC---CCCCCEEEcCCCccCccCHHHhhCc--cCCcEEECCCCCCC-CcChhh
Confidence 44556753 45889998886 777532 48899999999999998774 4555 78999999999997 688777
Q ss_pred hcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccccCchhhh---cCC
Q 044996 116 FDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGSISPALR---ELD 190 (678)
Q Consensus 116 ~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ip~~~~---~l~ 190 (678)
|.++++|++|+|++|+|++..+..|..+++|++|+|++|.|+ .+|.. .+.+|+.|+|++|+|++..+..+. ++.
T Consensus 84 ~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 162 (229)
T 3e6j_A 84 FDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLT 162 (229)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred cccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCC
Confidence 899999999999999999877788899999999999999999 77764 678999999999999976555454 445
Q ss_pred CCCCCCCCCCCCC
Q 044996 191 PSSFSGNRDLCGE 203 (678)
Q Consensus 191 ~~~~~gn~~lc~~ 203 (678)
...+.+|++.|..
T Consensus 163 ~L~l~~N~~~c~c 175 (229)
T 3e6j_A 163 HAYLFGNPWDCEC 175 (229)
T ss_dssp EEECTTSCBCTTB
T ss_pred EEEeeCCCccCCc
Confidence 5678999988753
No 272
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.62 E-value=4.7e-16 Score=162.66 Aligned_cols=148 Identities=18% Similarity=0.274 Sum_probs=122.4
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-cc---------ccCCCCccEEEcccCccccccChh
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LR---------QLGNGALRSVYLSNNRFSGEIPTD 114 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~---------~~~~~~L~~L~Ls~N~l~G~ip~~ 114 (678)
.++..|+|++|.+. .+|. .++.|++|+.|+|++|++.|.+|. +. .+ ++|++|+|++|+|+ .||..
T Consensus 127 ~~L~~L~Ls~n~l~-~lp~-~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l--~~L~~L~L~~n~l~-~lp~~ 201 (328)
T 4fcg_A 127 AGLETLTLARNPLR-ALPA-SIASLNRLRELSIRACPELTELPEPLASTDASGEHQGL--VNLQSLRLEWTGIR-SLPAS 201 (328)
T ss_dssp TTCSEEEEESCCCC-CCCG-GGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEES--TTCCEEEEEEECCC-CCCGG
T ss_pred CCCCEEECCCCccc-cCcH-HHhcCcCCCEEECCCCCCccccChhHhhccchhhhccC--CCCCEEECcCCCcC-cchHh
Confidence 46889999999998 8876 489999999999999999999984 22 24 67999999999998 88876
Q ss_pred hhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccccCchhhhcCC--
Q 044996 115 AFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGSISPALRELD-- 190 (678)
Q Consensus 115 ~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ip~~~~~l~-- 190 (678)
|+++++|++|+|++|++++ +|..++.+++|++|+|++|++.+.+|.. .+.+|+.|+|++|++.+.+|..+.++.
T Consensus 202 -l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L 279 (328)
T 4fcg_A 202 -IANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQL 279 (328)
T ss_dssp -GGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTC
T ss_pred -hcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCC
Confidence 8889999999999999985 6777889999999999999999988874 567889999999988888888776554
Q ss_pred -CCCCCCCCC
Q 044996 191 -PSSFSGNRD 199 (678)
Q Consensus 191 -~~~~~gn~~ 199 (678)
...+.+|..
T Consensus 280 ~~L~L~~n~~ 289 (328)
T 4fcg_A 280 EKLDLRGCVN 289 (328)
T ss_dssp CEEECTTCTT
T ss_pred CEEeCCCCCc
Confidence 345666643
No 273
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.62 E-value=1.1e-15 Score=146.93 Aligned_cols=165 Identities=22% Similarity=0.247 Sum_probs=126.0
Q ss_pred CCcceEEecC-----------CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEc
Q 044996 35 ANWNGVLCHR-----------GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYL 102 (678)
Q Consensus 35 ~~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~L 102 (678)
|.|..+.|+. .+++.|+|++|.+.+..+...+..+++|+.|+|++|+|++.+|. +..+ .+|++|+|
T Consensus 8 C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l--~~L~~L~L 85 (192)
T 1w8a_A 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGA--SHIQELQL 85 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTC--TTCCEEEC
T ss_pred ECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCc--ccCCEEEC
Confidence 5799999963 26889999999998554444588999999999999999998874 5555 77999999
Q ss_pred ccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCccCC-CCCcEEEeecCccccc
Q 044996 103 SNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQQ-KDLVSFNVSNNALFGS 181 (678)
Q Consensus 103 s~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~-~~l~~l~l~~N~l~g~ 181 (678)
++|+|++..|. .|.++++|++|+|++|+|++.+|..|..+++|++|+|++|.|++..+.... ..++...+..+.....
T Consensus 86 s~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~ 164 (192)
T 1w8a_A 86 GENKIKEISNK-MFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCG 164 (192)
T ss_dssp CSCCCCEECSS-SSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBC
T ss_pred CCCcCCccCHH-HhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCC
Confidence 99999976554 489999999999999999999999999999999999999999988764211 1122223344555555
Q ss_pred CchhhhcCCCCCCCCCCCCCC
Q 044996 182 ISPALRELDPSSFSGNRDLCG 202 (678)
Q Consensus 182 ip~~~~~l~~~~~~gn~~lc~ 202 (678)
.|..+.......+..+...|.
T Consensus 165 ~P~~l~~~~l~~l~~~~~~C~ 185 (192)
T 1w8a_A 165 APSKVRDVQIKDLPHSEFKCS 185 (192)
T ss_dssp SSTTTTTSBGGGSCTTTCCCC
T ss_pred CChHHcCCChhhCcHhhcCcC
Confidence 677766665555555555554
No 274
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.62 E-value=1.8e-15 Score=148.65 Aligned_cols=155 Identities=23% Similarity=0.281 Sum_probs=126.7
Q ss_pred eEEecCCcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCC-cccccCCCCccEEEcccCccccccChhhhc
Q 044996 39 GVLCHRGKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMP-DLRQLGNGALRSVYLSNNRFSGEIPTDAFD 117 (678)
Q Consensus 39 gv~C~~~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~ 117 (678)
+=.|.. ..+++++++|. .+|.. + .+.|+.|+|++|++++..+ .+..+ ++|+.|+|++|++++..|.. |.
T Consensus 8 ~C~C~~---~~v~c~~~~l~-~iP~~-l--~~~l~~L~l~~n~i~~i~~~~~~~l--~~L~~L~Ls~N~i~~~~~~~-~~ 77 (220)
T 2v9t_B 8 ACTCSN---NIVDCRGKGLT-EIPTN-L--PETITEIRLEQNTIKVIPPGAFSPY--KKLRRIDLSNNQISELAPDA-FQ 77 (220)
T ss_dssp TSEEET---TEEECTTSCCS-SCCSS-C--CTTCCEEECCSSCCCEECTTSSTTC--TTCCEEECCSSCCCEECTTT-TT
T ss_pred CCEECC---CEEEcCCCCcC-cCCCc-c--CcCCCEEECCCCcCCCcCHhHhhCC--CCCCEEECCCCcCCCcCHHH-hh
Confidence 345643 35889999987 67753 2 2689999999999998776 45555 78999999999999766654 99
Q ss_pred CCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccccCchhhhc---CCCC
Q 044996 118 GMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGSISPALRE---LDPS 192 (678)
Q Consensus 118 ~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ip~~~~~---l~~~ 192 (678)
++++|++|+|++|+|++..+..|..+++|++|+|++|.|++..|.. .+.+|+.|+|++|+|++..+..+.. +...
T Consensus 78 ~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 157 (220)
T 2v9t_B 78 GLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTM 157 (220)
T ss_dssp TCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred CCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEE
Confidence 9999999999999999666666899999999999999999887764 5689999999999999877765554 4556
Q ss_pred CCCCCCCCCCC
Q 044996 193 SFSGNRDLCGE 203 (678)
Q Consensus 193 ~~~gn~~lc~~ 203 (678)
.+.+|++.|.+
T Consensus 158 ~L~~N~~~c~c 168 (220)
T 2v9t_B 158 HLAQNPFICDC 168 (220)
T ss_dssp ECCSSCEECSG
T ss_pred EeCCCCcCCCC
Confidence 78999988854
No 275
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.62 E-value=1.1e-15 Score=174.21 Aligned_cols=166 Identities=20% Similarity=0.283 Sum_probs=128.9
Q ss_pred CCCCCCCCCCCCCCCCCCcc----eEEecC-----------CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCccc
Q 044996 19 ALANWDDRTPPCNENGANWN----GVLCHR-----------GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLE 83 (678)
Q Consensus 19 ~l~~W~~~~~~c~~~~~~w~----gv~C~~-----------~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~ 83 (678)
.++.|+.+.+.| +..|.|. -|.|.. ..++.|+|++|.|+ .|++..|.+|++|+.|+|++|+|+
T Consensus 12 ~~~~~~~~~p~~-~~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~-~l~~~~f~~l~~L~~L~Ls~N~i~ 89 (635)
T 4g8a_A 12 KLAAANSSIPES-WEPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQ 89 (635)
T ss_dssp --------------CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTCCCC
T ss_pred hhhcccCCCCCC-CCCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCC-CCCHHHHhCCCCCCEEECCCCcCC
Confidence 577777554322 1122332 477852 35899999999998 677677999999999999999999
Q ss_pred ccCCc-ccccCCCCccEEEcccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccc-cCC
Q 044996 84 GPMPD-LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEG-QIP 161 (678)
Q Consensus 84 g~~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g-~~p 161 (678)
+..|. +..+ ++|++|+|++|+|+ .+|+..|.++++|++|+|++|++++..+..|+++++|++|+|++|.+++ .+|
T Consensus 90 ~i~~~~f~~L--~~L~~L~Ls~N~l~-~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~ 166 (635)
T 4g8a_A 90 TIEDGAYQSL--SHLSTLILTGNPIQ-SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLP 166 (635)
T ss_dssp EECTTTTTTC--TTCCEEECTTCCCC-EECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCC
T ss_pred CcChhHhcCC--CCCCEEEccCCcCC-CCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCc
Confidence 87774 5556 78999999999999 5777779999999999999999998777889999999999999999986 456
Q ss_pred cc--CCCCCcEEEeecCcccccCchhhhcC
Q 044996 162 DF--QQKDLVSFNVSNNALFGSISPALREL 189 (678)
Q Consensus 162 ~~--~~~~l~~l~l~~N~l~g~ip~~~~~l 189 (678)
.. .+++|+.|+|++|+|++..|..+..+
T Consensus 167 ~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L 196 (635)
T 4g8a_A 167 EYFSNLTNLEHLDLSSNKIQSIYCTDLRVL 196 (635)
T ss_dssp GGGGGCTTCCEEECCSSCCCEECGGGGHHH
T ss_pred hhhccchhhhhhcccCccccccccccccch
Confidence 64 57899999999999999888776544
No 276
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.61 E-value=3.4e-15 Score=151.61 Aligned_cols=131 Identities=23% Similarity=0.363 Sum_probs=79.6
Q ss_pred cEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcccCccccccChhhhcCCcccce
Q 044996 46 KIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRK 124 (678)
Q Consensus 46 ~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~ 124 (678)
.+..|+|++|.+. .+++..+..+++|+.|+|++|.++...+. +..+ ++|++|+|++|+++ .+|+..|.++++|++
T Consensus 38 ~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l--~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~ 113 (270)
T 2o6q_A 38 DTKKLDLQSNKLS-SLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKEL--KNLETLWVTDNKLQ-ALPIGVFDQLVNLAE 113 (270)
T ss_dssp TCSEEECCSSCCS-CCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSC--TTCCEEECCSSCCC-CCCTTTTTTCSSCCE
T ss_pred CCCEEECcCCCCC-eeCHHHhcCCCCCCEEECCCCccCeeChhhhcCC--CCCCEEECCCCcCC-cCCHhHcccccCCCE
Confidence 4778899998887 45555577788888888888887754443 2333 55666666666666 344444566666666
Q ss_pred eeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccc
Q 044996 125 LLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFG 180 (678)
Q Consensus 125 l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g 180 (678)
|+|++|++++..|..|..+++|++|+|++|.+++..+.. .+.+|+.|+|++|.+++
T Consensus 114 L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 171 (270)
T 2o6q_A 114 LRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKR 171 (270)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred EECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcE
Confidence 666666666555555566666666666666555433221 33444555555554443
No 277
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.61 E-value=1.9e-15 Score=153.53 Aligned_cols=156 Identities=21% Similarity=0.347 Sum_probs=127.1
Q ss_pred CCcceEEec-CCcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCC-cccccCCCCccEEEcccCccccccC
Q 044996 35 ANWNGVLCH-RGKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMP-DLRQLGNGALRSVYLSNNRFSGEIP 112 (678)
Q Consensus 35 ~~w~gv~C~-~~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~~~~~~L~~L~Ls~N~l~G~ip 112 (678)
|.|.|+.|. .+.+..+++++++|. .+|.. + .++|+.|+|++|++++..+ .+..+ ++|++|+|++|+++ .+|
T Consensus 5 C~~~~~~C~c~~~~~~l~~~~~~l~-~ip~~-~--~~~l~~L~l~~n~l~~~~~~~~~~l--~~L~~L~l~~n~l~-~i~ 77 (270)
T 2o6q_A 5 CKKDGGVCSCNNNKNSVDCSSKKLT-AIPSN-I--PADTKKLDLQSNKLSSLPSKAFHRL--TKLRLLYLNDNKLQ-TLP 77 (270)
T ss_dssp BGGGTCSBEEETTTTEEECTTSCCS-SCCSC-C--CTTCSEEECCSSCCSCCCTTSSSSC--TTCCEEECCSSCCS-CCC
T ss_pred CCCCCCCCEeCCCCCEEEccCCCCC-ccCCC-C--CCCCCEEECcCCCCCeeCHHHhcCC--CCCCEEECCCCccC-eeC
Confidence 479999986 455678999999998 57753 2 3679999999999998666 45555 78999999999999 688
Q ss_pred hhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccccCchhhhc--
Q 044996 113 TDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGSISPALRE-- 188 (678)
Q Consensus 113 ~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ip~~~~~-- 188 (678)
..+|.++++|++|+|++|++++..+..|..+++|++|+|++|.+++..|.. .+++|+.|+|++|.+++..+..+..
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 157 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLT 157 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCc
Confidence 777899999999999999999877778899999999999999999776653 6789999999999998755544443
Q ss_pred -CCCCCCCCC
Q 044996 189 -LDPSSFSGN 197 (678)
Q Consensus 189 -l~~~~~~gn 197 (678)
|....+.+|
T Consensus 158 ~L~~L~L~~n 167 (270)
T 2o6q_A 158 SLKELRLYNN 167 (270)
T ss_dssp TCCEEECCSS
T ss_pred ccceeEecCC
Confidence 333445555
No 278
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.61 E-value=2.6e-16 Score=181.78 Aligned_cols=176 Identities=17% Similarity=0.207 Sum_probs=114.1
Q ss_pred ChHHHHHHHHhcCCCC--CCCCCCCCCCCCCCCCCCCcceEEecCCcEEEEEeCCCCcee--------------------
Q 044996 2 TDSQTLLTLKQSLSNP--TALANWDDRTPPCNENGANWNGVLCHRGKIWGLKLEDMGLQG-------------------- 59 (678)
Q Consensus 2 ~~~~aLl~~k~~l~~~--~~l~~W~~~~~~c~~~~~~w~gv~C~~~~v~~l~l~~~~l~g-------------------- 59 (678)
.+.++|+++..++... ..-..|.....++. .|.++.++.++++.|+|..+++..
T Consensus 132 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~s~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~ 207 (727)
T 4b8c_D 132 CTKQALMEMADTLTDSKTAKKQQPTGDSTPSG----TATNSAVSTPLTPKIELFANGKDEANQALLQHKKLSQYSIDEDD 207 (727)
T ss_dssp CCCHHHHHHHHHHHHHHTTC------------------------------------------------------------
T ss_pred cchhhhhhhhhhcccccCcccCCCcCCCCccc----cCCCceecCCccceEEeeCCCCCcchhhHhhcCccCcccccCcc
Confidence 4678899998776422 22345654433332 699988887777777776554432
Q ss_pred ------ecChHHhhcCCCCCEEEccCCcccccCC-cccccCCCCccEEEcccCccccccChhhhcCCcccceeecccccc
Q 044996 60 ------NIDITILKELREMRTLSLMRNNLEGPMP-DLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQF 132 (678)
Q Consensus 60 ------~~~~~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~ 132 (678)
.++++.+..++.|+.|+|++|.+. .+| .+..+ .+|++|+|++|.|+ .||.. |++|++|++|+|++|.|
T Consensus 208 ~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l--~~L~~L~Ls~N~l~-~lp~~-~~~l~~L~~L~Ls~N~l 282 (727)
T 4b8c_D 208 DIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKY--DFLTRLYLNGNSLT-ELPAE-IKNLSNLRVLDLSHNRL 282 (727)
T ss_dssp --------------CCCCCCEEECTTSCCS-CCCGGGGGC--CSCSCCBCTTSCCS-CCCGG-GGGGTTCCEEECTTSCC
T ss_pred ccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCC--CCCCEEEeeCCcCc-ccChh-hhCCCCCCEEeCcCCcC
Confidence 123455788999999999999998 555 55555 77999999999999 89976 89999999999999999
Q ss_pred ccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccccCchhhhc
Q 044996 133 NGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGSISPALRE 188 (678)
Q Consensus 133 ~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ip~~~~~ 188 (678)
+ .+|..|++|++|++|+|++|.|+ .+|.. .+.+|+.|+|++|.|+|.+|..+..
T Consensus 283 ~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 338 (727)
T 4b8c_D 283 T-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTE 338 (727)
T ss_dssp S-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHH
T ss_pred C-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhh
Confidence 9 89999999999999999999997 78874 6789999999999999999987654
No 279
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.60 E-value=9.6e-16 Score=180.87 Aligned_cols=140 Identities=22% Similarity=0.308 Sum_probs=119.2
Q ss_pred HhhcCCCCCEEEccCCcccccCCcccccCCCCccEEEcccCccc-----cccChhhhcCCcccceeeccccccccCCchh
Q 044996 65 ILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFS-----GEIPTDAFDGMTSLRKLLLADNQFNGPIPES 139 (678)
Q Consensus 65 ~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~-----G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~ 139 (678)
.+..+++|+.|+|++|++++..+.......++|+.|+|++|.++ +..| ..|.++++|+.|+|++|++++..|..
T Consensus 421 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~ 499 (844)
T 3j0a_A 421 FLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCW-DVFEGLSHLQVLYLNHNYLNSLPPGV 499 (844)
T ss_dssp HHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCS-SCSSCBCCEECCCCCHHHHTTCCTTS
T ss_pred hhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccch-hhhcCcccccEEECCCCcccccChhH
Confidence 35689999999999999998655311122378999999999997 3333 45889999999999999999999999
Q ss_pred hcCCCCCCeEeccCCcccccCCccCCCCCcEEEeecCcccccCchhhhcCCCCCCCCCCCCCCCCC
Q 044996 140 LTRLSRLVELRLEGNKFEGQIPDFQQKDLVSFNVSNNALFGSISPALRELDPSSFSGNRDLCGEPL 205 (678)
Q Consensus 140 ~~~l~~L~~l~l~~N~l~g~~p~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~~~~~gn~~lc~~~~ 205 (678)
|..+++|+.|+|++|+|++..|.....+|+.|+|++|+|+|.+|..+..+....+.||++.|.+.+
T Consensus 500 ~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 500 FSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp SSSCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSSC
T ss_pred ccchhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEecCCCccccccc
Confidence 999999999999999999876666558999999999999999999988888889999999996543
No 280
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.60 E-value=2.9e-15 Score=153.35 Aligned_cols=153 Identities=25% Similarity=0.353 Sum_probs=81.4
Q ss_pred EEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcccCccccccChhhhcCCccccee
Q 044996 47 IWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKL 125 (678)
Q Consensus 47 v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l 125 (678)
+..|+|++|..-+.+++..+..+++|+.|+|++|.+.+..|. +..+ ++|++|+|++|++++ +|+..|+.+++|+.|
T Consensus 82 L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L 158 (285)
T 1ozn_A 82 LEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGL--AALQYLYLQDNALQA-LPDDTFRDLGNLTHL 158 (285)
T ss_dssp CCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTC--TTCCEEECCSSCCCC-CCTTTTTTCTTCCEE
T ss_pred CCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCC--cCCCEEECCCCcccc-cCHhHhccCCCccEE
Confidence 444444444422233333344555555555555555544332 2223 446666666666653 333335556666666
Q ss_pred eccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccccCchhhhc---CCCCCCCCCCCC
Q 044996 126 LLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGSISPALRE---LDPSSFSGNRDL 200 (678)
Q Consensus 126 ~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ip~~~~~---l~~~~~~gn~~l 200 (678)
+|++|++++..+..+..+++|+.|+|++|.+++..|.. ..++|+.|++++|.+++..+..+.. +....+.+|++.
T Consensus 159 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 238 (285)
T 1ozn_A 159 FLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (285)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred ECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCcc
Confidence 66666666544445666666666666666666555542 3456666666666666544443433 334456777766
Q ss_pred CC
Q 044996 201 CG 202 (678)
Q Consensus 201 c~ 202 (678)
|.
T Consensus 239 c~ 240 (285)
T 1ozn_A 239 CD 240 (285)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 281
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.60 E-value=1.8e-15 Score=165.62 Aligned_cols=152 Identities=17% Similarity=0.247 Sum_probs=129.9
Q ss_pred CCCcce--EEecC----------CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc--ccccCCCCccE
Q 044996 34 GANWNG--VLCHR----------GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD--LRQLGNGALRS 99 (678)
Q Consensus 34 ~~~w~g--v~C~~----------~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~--~~~~~~~~L~~ 99 (678)
.|.|.+ |.|.. .+++.|+|++|.+.+..| ..+..|++|+.|+|++|.+.+.++. +..+ ++|++
T Consensus 7 ~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l--~~L~~ 83 (455)
T 3v47_A 7 ECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNE-TSFSRLQDLQFLKVEQQTPGLVIRNNTFRGL--SSLII 83 (455)
T ss_dssp CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECT-TTTSSCTTCCEEECCCCSTTCEECTTTTTTC--TTCCE
T ss_pred eeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCCh-hHhccCccccEEECcCCcccceECccccccc--ccCCE
Confidence 455666 88863 358999999999986555 4689999999999999999888763 5555 78999
Q ss_pred EEcccCccccccChhhhcCCcccceeeccccccccCCchh--hcCCCCCCeEeccCCcccccCCcc---CCCCCcEEEee
Q 044996 100 VYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPES--LTRLSRLVELRLEGNKFEGQIPDF---QQKDLVSFNVS 174 (678)
Q Consensus 100 L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~--~~~l~~L~~l~l~~N~l~g~~p~~---~~~~l~~l~l~ 174 (678)
|+|++|++++.+|.. |+++++|++|+|++|++++.+|.. +.++++|++|+|++|.+++..|.. .+++|+.|+++
T Consensus 84 L~Ls~n~l~~~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~ 162 (455)
T 3v47_A 84 LKLDYNQFLQLETGA-FNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLT 162 (455)
T ss_dssp EECTTCTTCEECTTT-TTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECT
T ss_pred EeCCCCccCccChhh-ccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCC
Confidence 999999999777765 999999999999999999977776 999999999999999999888863 67899999999
Q ss_pred cCcccccCchhhhcC
Q 044996 175 NNALFGSISPALREL 189 (678)
Q Consensus 175 ~N~l~g~ip~~~~~l 189 (678)
+|.+++..|..+..+
T Consensus 163 ~n~l~~~~~~~l~~l 177 (455)
T 3v47_A 163 FNKVKSICEEDLLNF 177 (455)
T ss_dssp TCCBSCCCTTTSGGG
T ss_pred CCcccccChhhhhcc
Confidence 999999888777654
No 282
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.59 E-value=6.2e-15 Score=151.32 Aligned_cols=153 Identities=25% Similarity=0.287 Sum_probs=87.5
Q ss_pred cEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccC---------------------C-cccccCCCCccEEEcc
Q 044996 46 KIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPM---------------------P-DLRQLGNGALRSVYLS 103 (678)
Q Consensus 46 ~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~---------------------p-~~~~~~~~~L~~L~Ls 103 (678)
.++.|+|++|.+.+..+ ..+..+++|+.|+|++|.+++.. | .+..+ ++|++|+|+
T Consensus 32 ~l~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l--~~L~~L~l~ 108 (290)
T 1p9a_G 32 DTTILHLSENLLYTFSL-ATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTL--PALTVLDVS 108 (290)
T ss_dssp TCCEEECTTSCCSEEEG-GGGTTCTTCCEEECTTSCCCEEECCSCCTTCCEEECCSSCCSSCCCCTTTC--TTCCEEECC
T ss_pred CCCEEEcCCCcCCccCH-HHhhcCCCCCEEECCCCccCcccCCCCCCcCCEEECCCCcCCcCchhhccC--CCCCEEECC
Confidence 46667777777664333 34566666666666666655432 2 12222 456666666
Q ss_pred cCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCccccc
Q 044996 104 NNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGS 181 (678)
Q Consensus 104 ~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ 181 (678)
+|+|+ .+|+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|+|++..+.. .+.+|+.|+|++|+|+ .
T Consensus 109 ~N~l~-~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ 186 (290)
T 1p9a_G 109 FNRLT-SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-T 186 (290)
T ss_dssp SSCCC-CCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-C
T ss_pred CCcCc-ccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-c
Confidence 66666 344344666666666666666666555555566666666666666666322221 3456667777777665 4
Q ss_pred Cchhhhc---CCCCCCCCCCCCCCC
Q 044996 182 ISPALRE---LDPSSFSGNRDLCGE 203 (678)
Q Consensus 182 ip~~~~~---l~~~~~~gn~~lc~~ 203 (678)
+|..+.. +....+.||++.|.+
T Consensus 187 ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 187 IPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp CCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred cChhhcccccCCeEEeCCCCccCcC
Confidence 5554433 333457788888753
No 283
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.59 E-value=9.3e-16 Score=149.30 Aligned_cols=138 Identities=22% Similarity=0.330 Sum_probs=120.6
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcccCccccccChhhhcCCcccc
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLR 123 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~ 123 (678)
.++..|+|++|.+. .+++..+..+++|++|+|++|++++..+. +..+ ++|++|+|++|+|++ +|+..|.++++|+
T Consensus 52 ~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l--~~L~~L~L~~N~l~~-~~~~~~~~l~~L~ 127 (208)
T 2o6s_A 52 TSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKL--TQLKELALNTNQLQS-LPDGVFDKLTQLK 127 (208)
T ss_dssp TTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC--TTCCEEECCSSCCCC-CCTTTTTTCTTCC
T ss_pred ccCcEEECCCCccC-ccChhhcCCCCCcCEEECCCCcCCccCHhHhcCc--cCCCEEEcCCCcCcc-cCHhHhccCCcCC
Confidence 46899999999998 56666789999999999999999976664 4455 789999999999995 6656689999999
Q ss_pred eeeccccccccCCchhhcCCCCCCeEeccCCcccccCCccCCCCCcEEEeecCcccccCchhhhcCCC
Q 044996 124 KLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQQKDLVSFNVSNNALFGSISPALRELDP 191 (678)
Q Consensus 124 ~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~ 191 (678)
+|+|++|++++..+..+..+++|+.|+|++|.+.+..| +|+.|+++.|+++|.+|.+++.+..
T Consensus 128 ~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~-----~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 128 DLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP-----GIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp EEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT-----TTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred EEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC-----CHHHHHHHHHhCCceeeccCccccC
Confidence 99999999998777779999999999999999987665 6889999999999999998887654
No 284
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.59 E-value=2e-15 Score=158.57 Aligned_cols=136 Identities=13% Similarity=0.096 Sum_probs=98.3
Q ss_pred hccccCccCceeEEEEEecCCceEEEEEecccCh--------------hhH--------HHHHHHHHHHhccCCCCccce
Q 044996 373 SAEILGSGCFGSSYKASLSTGAMMVVKRFKQMNN--------------VGR--------EEFQEHMRRLGRLRHPNLLPL 430 (678)
Q Consensus 373 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~~--------~~~~~e~~~l~~l~H~niv~l 430 (678)
+.+.||+|+||.||+|...+|+.||||+++.... ... ....+|...|.++.+.++.-.
T Consensus 99 I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp 178 (397)
T 4gyi_A 99 VGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVP 178 (397)
T ss_dssp EEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCC
T ss_pred ecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 3578999999999999998999999998753110 001 112456777777765554322
Q ss_pred eEEEEeCCceEEEEeccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCC
Q 044996 431 VAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNES 510 (678)
Q Consensus 431 ~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~ 510 (678)
.-+.. ...+|||||+++++|..+.. ......++.|++.+|.|||+. +||||||||.|||++++
T Consensus 179 ~p~~~--~~~~LVME~i~G~~L~~l~~-----------~~~~~~l~~qll~~l~~lH~~----gIVHrDLKp~NILl~~d 241 (397)
T 4gyi_A 179 EPIAQ--SRHTIVMSLVDALPMRQVSS-----------VPDPASLYADLIALILRLAKH----GLIHGDFNEFNILIREE 241 (397)
T ss_dssp CEEEE--ETTEEEEECCSCEEGGGCCC-----------CSCHHHHHHHHHHHHHHHHHT----TEECSCCSTTSEEEEEE
T ss_pred eeeec--cCceEEEEecCCccHhhhcc-----------cHHHHHHHHHHHHHHHHHHHC----CCcCCCCCHHHEEEeCC
Confidence 22222 23479999999988865432 123457899999999999976 79999999999999887
Q ss_pred C----------ceEEeecCCccccC
Q 044996 511 L----------EPVLADYGLIPVMN 525 (678)
Q Consensus 511 ~----------~~kl~DfGla~~~~ 525 (678)
+ .+.|+||+.+-...
T Consensus 242 gd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 242 KDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp ECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCcccccccccceEEEEeCCcccCC
Confidence 6 38899999875443
No 285
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.59 E-value=4.7e-15 Score=168.16 Aligned_cols=174 Identities=15% Similarity=0.186 Sum_probs=134.8
Q ss_pred CCCCCCCCCCCCCCCCCCcceEEecC------------------CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCC
Q 044996 19 ALANWDDRTPPCNENGANWNGVLCHR------------------GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRN 80 (678)
Q Consensus 19 ~l~~W~~~~~~c~~~~~~w~gv~C~~------------------~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N 80 (678)
.+++|....+||. ....|.++.|+. ..+..+++.++.+. .+|+..+..+++|+.|+|++|
T Consensus 8 ~l~~~~~~~~C~~-~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n 85 (597)
T 3oja_B 8 NVKPRQPEYKCID-SNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDL 85 (597)
T ss_dssp ---CCCSEECCCC-C--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEES-EECTHHHHHCCCCSEEECTTS
T ss_pred cccCCCCCCcCcc-cCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCC
Confidence 4788987766653 233577776641 23566778887775 688888999999999999999
Q ss_pred cccccCC-cccccCCCCccEEEcccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCccccc
Q 044996 81 NLEGPMP-DLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQ 159 (678)
Q Consensus 81 ~l~g~~p-~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~ 159 (678)
.+.+..| .+..+ ++|++|+|++|.|++. |+..|+++++|++|+|++|.|++..+..|+++++|++|+|++|.|++.
T Consensus 86 ~l~~~~~~~~~~l--~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~ 162 (597)
T 3oja_B 86 QIEEIDTYAFAYA--HTIQKLYMGFNAIRYL-PPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERI 162 (597)
T ss_dssp CCCEECTTTTTTC--TTCCEEECCSSCCCCC-CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBC
T ss_pred CCCCCChHHhcCC--CCCCEEECCCCcCCCC-CHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCC
Confidence 9999887 56656 7899999999999974 445589999999999999999966666679999999999999999988
Q ss_pred CCcc--CCCCCcEEEeecCcccccCchhhhcCCCCCCCCC
Q 044996 160 IPDF--QQKDLVSFNVSNNALFGSISPALRELDPSSFSGN 197 (678)
Q Consensus 160 ~p~~--~~~~l~~l~l~~N~l~g~ip~~~~~l~~~~~~gn 197 (678)
.|.. .+++|+.|+|++|.|++.-+..+..+....+.+|
T Consensus 163 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n 202 (597)
T 3oja_B 163 EDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYN 202 (597)
T ss_dssp CTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSS
T ss_pred ChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccC
Confidence 8763 6789999999999998865555555554455554
No 286
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.58 E-value=1.9e-15 Score=169.52 Aligned_cols=151 Identities=21% Similarity=0.253 Sum_probs=128.6
Q ss_pred CCcceEEecC-------------CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEE
Q 044996 35 ANWNGVLCHR-------------GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSV 100 (678)
Q Consensus 35 ~~w~gv~C~~-------------~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L 100 (678)
|.|.|+ |+. .+++.|+|++|.+.+..| ..+..+++|++|+|++|++++..|. +..+ ++|++|
T Consensus 4 C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l--~~L~~L 79 (549)
T 2z81_A 4 CDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGH-GDLRACANLQVLILKSSRINTIEGDAFYSL--GSLEHL 79 (549)
T ss_dssp ECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECS-STTSSCTTCCEEECTTSCCCEECTTTTTTC--TTCCEE
T ss_pred CCCCce-EECCCCccccccccCCCCccEEECcCCccCccCh-hhhhcCCcccEEECCCCCcCccChhhcccc--ccCCEE
Confidence 479998 752 268999999999986555 4689999999999999999998874 5555 789999
Q ss_pred EcccCccccccChhhhcCCcccceeecccccccc-CCchhhcCCCCCCeEeccCCcccccCCcc---CCCCCcEEEeecC
Q 044996 101 YLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNG-PIPESLTRLSRLVELRLEGNKFEGQIPDF---QQKDLVSFNVSNN 176 (678)
Q Consensus 101 ~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g-~~p~~~~~l~~L~~l~l~~N~l~g~~p~~---~~~~l~~l~l~~N 176 (678)
+|++|++++..| ..|+++++|++|+|++|.+++ .+|..++++++|++|+|++|.+.+.+|.. .+++|+.|++++|
T Consensus 80 ~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n 158 (549)
T 2z81_A 80 DLSDNHLSSLSS-SWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKAL 158 (549)
T ss_dssp ECTTSCCCSCCH-HHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEET
T ss_pred ECCCCccCccCH-HHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCC
Confidence 999999996544 559999999999999999997 57888999999999999999988888752 5678999999999
Q ss_pred cccccCchhhhcCC
Q 044996 177 ALFGSISPALRELD 190 (678)
Q Consensus 177 ~l~g~ip~~~~~l~ 190 (678)
.+++.+|..+..+.
T Consensus 159 ~l~~~~~~~l~~l~ 172 (549)
T 2z81_A 159 SLRNYQSQSLKSIR 172 (549)
T ss_dssp TCCEECTTTTTTCS
T ss_pred cccccChhhhhccc
Confidence 99999988776543
No 287
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.58 E-value=2.9e-15 Score=170.25 Aligned_cols=155 Identities=17% Similarity=0.178 Sum_probs=109.7
Q ss_pred cEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcccCccccc-cChhhhcCCcccc
Q 044996 46 KIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSNNRFSGE-IPTDAFDGMTSLR 123 (678)
Q Consensus 46 ~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~-ip~~~~~~l~~L~ 123 (678)
++..|+|++|.+.+..+...+..+++|+.|+|++|.+.+.+|. +..+ ++|++|+|++|.+++. +|. .|+.+++|+
T Consensus 400 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~l~~n~l~~~~~~~-~~~~l~~L~ 476 (606)
T 3vq2_A 400 ELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGL--TSLNTLKMAGNSFKDNTLSN-VFANTTNLT 476 (606)
T ss_dssp TCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTC--TTCCEEECTTCEEGGGEECS-CCTTCTTCC
T ss_pred CCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCC--CCCCEEECCCCcCCCcchHH-hhccCCCCC
Confidence 3445555555555444434566677777777777777776663 3344 6688888888888874 454 478888888
Q ss_pred eeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccccCchhhhcC----CCCCCCCC
Q 044996 124 KLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGSISPALREL----DPSSFSGN 197 (678)
Q Consensus 124 ~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ip~~~~~l----~~~~~~gn 197 (678)
.|+|++|++++.+|..+.++++|+.|+|++|++++.+|.. .+++|+.|+|++|+|+ .+|..+..+ ....+.+|
T Consensus 477 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N 555 (606)
T 3vq2_A 477 FLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNN 555 (606)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSC
T ss_pred EEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCC
Confidence 8888888888888888888888888888888888777763 4678888888888887 577666544 34468899
Q ss_pred CCCCCCC
Q 044996 198 RDLCGEP 204 (678)
Q Consensus 198 ~~lc~~~ 204 (678)
++.|.++
T Consensus 556 ~~~c~c~ 562 (606)
T 3vq2_A 556 SVACICE 562 (606)
T ss_dssp CCCCSST
T ss_pred CcccCCc
Confidence 9888644
No 288
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.57 E-value=7.6e-15 Score=147.33 Aligned_cols=133 Identities=26% Similarity=0.365 Sum_probs=116.6
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcccCccccccChhhhcCCcccc
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLR 123 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~ 123 (678)
.++..|+|++|.+.+ +++..+..+++|+.|+|++|+|++..+. +..+ ++|++|+|++|+|+ .+|+..|.++++|+
T Consensus 59 ~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~L~~N~l~-~~~~~~~~~l~~L~ 134 (251)
T 3m19_A 59 TKLTWLNLDYNQLQT-LSAGVFDDLTELGTLGLANNQLASLPLGVFDHL--TQLDKLYLGGNQLK-SLPSGVFDRLTKLK 134 (251)
T ss_dssp TTCCEEECTTSCCCC-CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTC--TTCCEEECCSSCCC-CCCTTTTTTCTTCC
T ss_pred ccCCEEECCCCcCCc-cCHhHhccCCcCCEEECCCCcccccChhHhccc--CCCCEEEcCCCcCC-CcChhHhccCCccc
Confidence 579999999999996 4445689999999999999999987664 3445 78999999999999 56666689999999
Q ss_pred eeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCccccc
Q 044996 124 KLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGS 181 (678)
Q Consensus 124 ~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ 181 (678)
.|+|++|++++..|..|..+++|++|+|++|.|++..+.. .+.+|+.|+|++|.|++.
T Consensus 135 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 135 ELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred EEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 9999999999877778999999999999999999766643 568999999999999987
No 289
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.57 E-value=8.3e-15 Score=148.93 Aligned_cols=135 Identities=22% Similarity=0.307 Sum_probs=118.4
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcccCccccccChhhhcCCcccc
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLR 123 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~ 123 (678)
.++..|+|++|.+.+ +++..+..+++|+.|+|++|++++..|. +..+ ++|++|+|++|+|++ +|+..|..+++|+
T Consensus 85 ~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~L~~n~l~~-~~~~~~~~l~~L~ 160 (272)
T 3rfs_A 85 TNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVENQLQSLPDGVFDKL--TNLTYLNLAHNQLQS-LPKGVFDKLTNLT 160 (272)
T ss_dssp TTCCEEECTTSCCCC-CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTC--TTCCEEECCSSCCCC-CCTTTTTTCTTCC
T ss_pred CCCCEEECCCCccCc-cChhHhcCCcCCCEEECCCCcCCccCHHHhccC--CCCCEEECCCCccCc-cCHHHhccCccCC
Confidence 579999999999984 5556689999999999999999987775 4555 779999999999995 5556689999999
Q ss_pred eeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccccCc
Q 044996 124 KLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGSIS 183 (678)
Q Consensus 124 ~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ip 183 (678)
.|+|++|++++..|..++.+++|+.|+|++|.|++..|.. .+++|+.|+|++|.+.|..|
T Consensus 161 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 161 ELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred EEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 9999999999888888899999999999999999877753 67899999999999998877
No 290
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.57 E-value=4.9e-16 Score=173.44 Aligned_cols=156 Identities=22% Similarity=0.357 Sum_probs=125.3
Q ss_pred CCCCCCCCCCCCCCCCCcceE-EecCCcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCcccccCCCCcc
Q 044996 20 LANWDDRTPPCNENGANWNGV-LCHRGKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALR 98 (678)
Q Consensus 20 l~~W~~~~~~c~~~~~~w~gv-~C~~~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~ 98 (678)
+.+|....++|......|.|+ .|..++++.|+|++|+|++ ||..+ +++|+.|+|++|+|+ .+| ..+ ++|+
T Consensus 33 l~~W~~~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l---~~~L~~L~Ls~N~l~-~ip--~~l--~~L~ 103 (571)
T 3cvr_A 33 WDKWEKQALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPDNL---PPQITVLEITQNALI-SLP--ELP--ASLE 103 (571)
T ss_dssp HHHHHTTCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCSCC---CTTCSEEECCSSCCS-CCC--CCC--TTCC
T ss_pred HHHHhccCCccccccchhhhccccccCCccEEEeCCCCCCc-cCHhH---cCCCCEEECcCCCCc-ccc--ccc--CCCC
Confidence 567876667784322259999 7877789999999999997 88653 488999999999999 577 334 7799
Q ss_pred EEEcccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCccCCCCCcEEEeecCcc
Q 044996 99 SVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQQKDLVSFNVSNNAL 178 (678)
Q Consensus 99 ~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~l~~l~l~~N~l 178 (678)
+|+|++|+|++ ||. |.+ +|++|+|++|+|++ +|. .+++|+.|+|++|.|++ +|. ..++|+.|+|++|+|
T Consensus 104 ~L~Ls~N~l~~-ip~--l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~-~l~~L~~L~Ls~N~L 172 (571)
T 3cvr_A 104 YLDACDNRLST-LPE--LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE-LPTSLEVLSVRNNQL 172 (571)
T ss_dssp EEECCSSCCSC-CCC--CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCC
T ss_pred EEEccCCCCCC-cch--hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC-cCCCcCEEECCCCCC
Confidence 99999999997 886 554 99999999999998 777 68999999999999997 776 678999999999999
Q ss_pred cccCchhhh-cCCCCCCCCC
Q 044996 179 FGSISPALR-ELDPSSFSGN 197 (678)
Q Consensus 179 ~g~ip~~~~-~l~~~~~~gn 197 (678)
++ +|. +. +|....+.+|
T Consensus 173 ~~-lp~-l~~~L~~L~Ls~N 190 (571)
T 3cvr_A 173 TF-LPE-LPESLEALDVSTN 190 (571)
T ss_dssp SC-CCC-CCTTCCEEECCSS
T ss_pred CC-cch-hhCCCCEEECcCC
Confidence 88 776 43 3333445555
No 291
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.57 E-value=1.5e-15 Score=157.55 Aligned_cols=149 Identities=19% Similarity=0.217 Sum_probs=74.7
Q ss_pred cEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCccccc--C-Cc--ccccCCCCccEEEcccCccc--cccChhhhcC
Q 044996 46 KIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGP--M-PD--LRQLGNGALRSVYLSNNRFS--GEIPTDAFDG 118 (678)
Q Consensus 46 ~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~--~-p~--~~~~~~~~L~~L~Ls~N~l~--G~ip~~~~~~ 118 (678)
++..|+|++|.+.+ +++..+..+++|+.|+|++|++.|. + +. +..+ ++|++|+|++|+++ +.++...+.+
T Consensus 146 ~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l--~~L~~L~Ls~N~l~~l~~~~~~l~~~ 222 (310)
T 4glp_A 146 GLKVLSIAQAHSPA-FSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKF--PAIQNLALRNTGMETPTGVCAALAAA 222 (310)
T ss_dssp CCCEEEEECCSSCC-CCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSS--CCCCSCBCCSSCCCCHHHHHHHHHHH
T ss_pred CCCEEEeeCCCcch-hhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcC--CCCCEEECCCCCCCchHHHHHHHHhc
Confidence 45555555555543 2223345555555555555555442 1 11 1122 44555555555554 1111112345
Q ss_pred CcccceeeccccccccCCchhhcCC---CCCCeEeccCCcccccCCccCCCCCcEEEeecCcccc-cCchhhhcCCCCCC
Q 044996 119 MTSLRKLLLADNQFNGPIPESLTRL---SRLVELRLEGNKFEGQIPDFQQKDLVSFNVSNNALFG-SISPALRELDPSSF 194 (678)
Q Consensus 119 l~~L~~l~l~~N~~~g~~p~~~~~l---~~L~~l~l~~N~l~g~~p~~~~~~l~~l~l~~N~l~g-~ip~~~~~l~~~~~ 194 (678)
+++|++|+|++|++++.+|..++.+ ++|++|+|++|+|+ .+|....++|+.|+|++|+|++ +++..+.++....+
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~L 301 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNRLNRAPQPDELPEVDNLTL 301 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCCCCSCCCTTSCCCCSCEEC
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhcCCCCEEECCCCcCCCCchhhhCCCccEEEC
Confidence 5566666666666665555555554 35666666666665 4555434556666666666655 34444444444455
Q ss_pred CCCC
Q 044996 195 SGNR 198 (678)
Q Consensus 195 ~gn~ 198 (678)
.+|+
T Consensus 302 ~~N~ 305 (310)
T 4glp_A 302 DGNP 305 (310)
T ss_dssp SSTT
T ss_pred cCCC
Confidence 5553
No 292
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.56 E-value=4.9e-15 Score=153.26 Aligned_cols=153 Identities=19% Similarity=0.236 Sum_probs=97.4
Q ss_pred EEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcccCcccc-ccChhhhcCCcccce
Q 044996 47 IWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSNNRFSG-EIPTDAFDGMTSLRK 124 (678)
Q Consensus 47 v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G-~ip~~~~~~l~~L~~ 124 (678)
+..|+|++|.+.+..+...+..+++|+.|+|++|.+.+.+|. +..+ ++|++|+|++|.+++ .+|.. |..+++|++
T Consensus 103 L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~l~~n~l~~~~~~~~-~~~l~~L~~ 179 (306)
T 2z66_A 103 LEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL--SSLEVLKMAGNSFQENFLPDI-FTELRNLTF 179 (306)
T ss_dssp CCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTC--TTCCEEECTTCEEGGGEECSC-CTTCTTCCE
T ss_pred CCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccC--cCCCEEECCCCccccccchhH-HhhCcCCCE
Confidence 444444444444322223456666666666666666665553 3333 567777777777776 35543 677777777
Q ss_pred eeccccccccCCchhhcCCCCCCeEeccCCcccccCCc--cCCCCCcEEEeecCcccccCchhhhcC----CCCCCCCCC
Q 044996 125 LLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPD--FQQKDLVSFNVSNNALFGSISPALREL----DPSSFSGNR 198 (678)
Q Consensus 125 l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~--~~~~~l~~l~l~~N~l~g~ip~~~~~l----~~~~~~gn~ 198 (678)
|+|++|++++..|..+..+++|+.|+|++|.+++..+. ....+|+.|+|++|.+++.+|..+..+ ....+.+|+
T Consensus 180 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~ 259 (306)
T 2z66_A 180 LDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQND 259 (306)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCC
T ss_pred EECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCC
Confidence 77777777777777777777777777777777765443 245677888888888877777665443 334567777
Q ss_pred CCCC
Q 044996 199 DLCG 202 (678)
Q Consensus 199 ~lc~ 202 (678)
.-|.
T Consensus 260 ~~~~ 263 (306)
T 2z66_A 260 FACT 263 (306)
T ss_dssp EECS
T ss_pred eecc
Confidence 6653
No 293
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.56 E-value=1.1e-14 Score=137.89 Aligned_cols=132 Identities=22% Similarity=0.308 Sum_probs=108.1
Q ss_pred CCcceEEecCCcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcccCccccccCh
Q 044996 35 ANWNGVLCHRGKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSNNRFSGEIPT 113 (678)
Q Consensus 35 ~~w~gv~C~~~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~ 113 (678)
|.|.+|.|+. +++. .+|.. ..++|+.|+|++|++++..+. +..+ ++|++|+|++|+|+ .+|+
T Consensus 7 C~~~~l~~~~----------~~l~-~~p~~---~~~~l~~L~l~~n~l~~~~~~~~~~l--~~L~~L~l~~n~l~-~~~~ 69 (177)
T 2o6r_A 7 CSGTEIRCNS----------KGLT-SVPTG---IPSSATRLELESNKLQSLPHGVFDKL--TQLTKLSLSQNQIQ-SLPD 69 (177)
T ss_dssp EETTEEECCS----------SCCS-SCCTT---CCTTCSEEECCSSCCCCCCTTTTTTC--TTCSEEECCSSCCC-CCCT
T ss_pred eCCCEEEecC----------CCCc-cCCCC---CCCCCcEEEeCCCcccEeCHHHhcCc--ccccEEECCCCcce-EeCh
Confidence 5788888854 3343 45532 247899999999999976664 3455 78999999999999 5666
Q ss_pred hhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccccCc
Q 044996 114 DAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGSIS 183 (678)
Q Consensus 114 ~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ip 183 (678)
..|.++++|+.|+|++|++++..+..+.++++|++|+|++|.|++..+.. .+.+|+.|+|++|.+++..|
T Consensus 70 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 70 GVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 66899999999999999999888888899999999999999999554442 46899999999999999876
No 294
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.55 E-value=2.7e-15 Score=171.32 Aligned_cols=135 Identities=18% Similarity=0.254 Sum_probs=113.8
Q ss_pred CceeecChHHhhcCCCCCEEEccCCccccc-----------------CC-ccc--ccCCCCccEEEcccCccccccChhh
Q 044996 56 GLQGNIDITILKELREMRTLSLMRNNLEGP-----------------MP-DLR--QLGNGALRSVYLSNNRFSGEIPTDA 115 (678)
Q Consensus 56 ~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~-----------------~p-~~~--~~~~~~L~~L~Ls~N~l~G~ip~~~ 115 (678)
+++| ||. .+++|++|++|+|++|+|+|. +| .+. .+ ++|++|+|++|++.|.+|..
T Consensus 194 ~l~~-ip~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l--~~L~~L~L~~n~l~~~~p~~- 268 (636)
T 4eco_A 194 NITF-VSK-AVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNL--KDLTDVEVYNCPNLTKLPTF- 268 (636)
T ss_dssp EEEE-ECG-GGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGC--TTCCEEEEECCTTCSSCCTT-
T ss_pred CCcc-CCH-HHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhccc--CCCCEEEecCCcCCccChHH-
Confidence 4456 776 489999999999999999995 77 455 56 77999999999999999976
Q ss_pred hcCCcccceeeccccc-ccc-CCchhhcCC------CCCCeEeccCCcccccCCc--c--CCCCCcEEEeecCcccccCc
Q 044996 116 FDGMTSLRKLLLADNQ-FNG-PIPESLTRL------SRLVELRLEGNKFEGQIPD--F--QQKDLVSFNVSNNALFGSIS 183 (678)
Q Consensus 116 ~~~l~~L~~l~l~~N~-~~g-~~p~~~~~l------~~L~~l~l~~N~l~g~~p~--~--~~~~l~~l~l~~N~l~g~ip 183 (678)
|+++++|++|+|++|+ |+| .+|..++++ ++|++|+|++|.|+ .+|. . .+++|+.|++++|.++|.+|
T Consensus 269 l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip 347 (636)
T 4eco_A 269 LKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP 347 (636)
T ss_dssp TTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC
T ss_pred HhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh
Confidence 8999999999999998 999 999999887 99999999999999 8887 3 67899999999999999999
Q ss_pred hhhhc---CCCCCCCCC
Q 044996 184 PALRE---LDPSSFSGN 197 (678)
Q Consensus 184 ~~~~~---l~~~~~~gn 197 (678)
.+.. +....+.+|
T Consensus 348 -~~~~l~~L~~L~L~~N 363 (636)
T 4eco_A 348 -AFGSEIKLASLNLAYN 363 (636)
T ss_dssp -CCEEEEEESEEECCSS
T ss_pred -hhCCCCCCCEEECCCC
Confidence 5543 333445555
No 295
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.55 E-value=8.1e-15 Score=154.93 Aligned_cols=148 Identities=22% Similarity=0.302 Sum_probs=122.2
Q ss_pred CcceEEec--C-----------CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEE
Q 044996 36 NWNGVLCH--R-----------GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVY 101 (678)
Q Consensus 36 ~w~gv~C~--~-----------~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~ 101 (678)
.|.|+ |+ . .+++.|+|++|++.+ ++...+..+++|+.|+|++|++++..|. +..+ ++|++|+
T Consensus 31 ~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~ 106 (353)
T 2z80_A 31 DRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITY-ISNSDLQRCVNLQALVLTSNGINTIEEDSFSSL--GSLEHLD 106 (353)
T ss_dssp CTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTC--TTCCEEE
T ss_pred CCCeE-eeCCCCCcccccccccccCcEEECCCCcCcc-cCHHHhccCCCCCEEECCCCccCccCHhhcCCC--CCCCEEE
Confidence 69987 64 1 268899999999984 6655689999999999999999998774 5555 7799999
Q ss_pred cccCccccccChhhhcCCcccceeeccccccccCCch--hhcCCCCCCeEeccCCcccccC-Ccc--CCCCCcEEEeecC
Q 044996 102 LSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPE--SLTRLSRLVELRLEGNKFEGQI-PDF--QQKDLVSFNVSNN 176 (678)
Q Consensus 102 Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~--~~~~l~~L~~l~l~~N~l~g~~-p~~--~~~~l~~l~l~~N 176 (678)
|++|+++ .+|+..|.++++|++|+|++|++++ +|. .+.++++|++|++++|+..+.+ |.. ..++|+.|++++|
T Consensus 107 Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n 184 (353)
T 2z80_A 107 LSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDAS 184 (353)
T ss_dssp CCSSCCS-SCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEET
T ss_pred CCCCcCC-cCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCC
Confidence 9999999 5777778999999999999999995 554 7899999999999999644444 432 5678999999999
Q ss_pred cccccCchhhhcC
Q 044996 177 ALFGSISPALREL 189 (678)
Q Consensus 177 ~l~g~ip~~~~~l 189 (678)
.+++..|..+..+
T Consensus 185 ~l~~~~~~~l~~l 197 (353)
T 2z80_A 185 DLQSYEPKSLKSI 197 (353)
T ss_dssp TCCEECTTTTTTC
T ss_pred CcCccCHHHHhcc
Confidence 9999888776554
No 296
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.54 E-value=2e-14 Score=154.03 Aligned_cols=173 Identities=15% Similarity=0.181 Sum_probs=127.8
Q ss_pred CCCCCCCCCCCCCCCCCcceEEecC------------------CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCc
Q 044996 20 LANWDDRTPPCNENGANWNGVLCHR------------------GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNN 81 (678)
Q Consensus 20 l~~W~~~~~~c~~~~~~w~gv~C~~------------------~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~ 81 (678)
+++|....+||.. ...|.++.|+. ..+..|++.++.+. .+|...+..+++|+.|+|++|.
T Consensus 3 ~~~~~~~~~C~~~-~~~~~c~~~~~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~ 80 (390)
T 3o6n_A 3 VKPRQPEYKCIDS-NLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQ 80 (390)
T ss_dssp ----CCEECBCC-------EEEESCEECSSCCCCEESCSSGGGCCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSC
T ss_pred cCCCCCccceehh-hhhhccceeeeeeecccccccccccccccCCceEEEecCCchh-hCChhHhcccccCcEEECCCCc
Confidence 5788877676631 12354544430 24667888888776 6888889999999999999999
Q ss_pred ccccCC-cccccCCCCccEEEcccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccccC
Q 044996 82 LEGPMP-DLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQI 160 (678)
Q Consensus 82 l~g~~p-~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~ 160 (678)
+.+..+ .+..+ .+|++|+|++|++++..| ..|+++++|++|+|++|+++...+..|.++++|++|+|++|.+++..
T Consensus 81 i~~~~~~~~~~l--~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~ 157 (390)
T 3o6n_A 81 IEEIDTYAFAYA--HTIQKLYMGFNAIRYLPP-HVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIE 157 (390)
T ss_dssp CCEECTTTTTTC--TTCCEEECCSSCCCCCCT-TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCC
T ss_pred ccccChhhccCC--CCcCEEECCCCCCCcCCH-HHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccC
Confidence 998776 45555 789999999999996544 55899999999999999999544444699999999999999999877
Q ss_pred Ccc--CCCCCcEEEeecCcccccCchhhhcCCCCCCCCC
Q 044996 161 PDF--QQKDLVSFNVSNNALFGSISPALRELDPSSFSGN 197 (678)
Q Consensus 161 p~~--~~~~l~~l~l~~N~l~g~ip~~~~~l~~~~~~gn 197 (678)
|.. .+++|+.|++++|.+++.-...+.++....+.+|
T Consensus 158 ~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n 196 (390)
T 3o6n_A 158 DDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYN 196 (390)
T ss_dssp TTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSS
T ss_pred hhhccCCCCCCEEECCCCcCCccccccccccceeecccc
Confidence 753 5689999999999998754444445544445544
No 297
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.54 E-value=3.6e-14 Score=145.12 Aligned_cols=148 Identities=20% Similarity=0.218 Sum_probs=118.7
Q ss_pred cEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCC-cccccCCCCccEEEcccCc-cccccChhhhcCCcccc
Q 044996 46 KIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMP-DLRQLGNGALRSVYLSNNR-FSGEIPTDAFDGMTSLR 123 (678)
Q Consensus 46 ~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~~~~~~L~~L~Ls~N~-l~G~ip~~~~~~l~~L~ 123 (678)
.+..|+|+++.+.+ +++..+..+++|+.|+|++|.+++..| .+..+ ++|++|+|++|. ++ .+++..|..+++|+
T Consensus 33 ~l~~L~l~~n~i~~-~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~l~~n~~l~-~~~~~~~~~l~~L~ 108 (285)
T 1ozn_A 33 ASQRIFLHGNRISH-VPAASFRACRNLTILWLHSNVLARIDAAAFTGL--ALLEQLDLSDNAQLR-SVDPATFHGLGRLH 108 (285)
T ss_dssp TCSEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTC--TTCCEEECCSCTTCC-CCCTTTTTTCTTCC
T ss_pred CceEEEeeCCcCCc-cCHHHcccCCCCCEEECCCCccceeCHhhcCCc--cCCCEEeCCCCCCcc-ccCHHHhcCCcCCC
Confidence 58899999999985 555568999999999999999998766 35555 779999999998 65 56445589999999
Q ss_pred eeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccccCchhhhc---CCCCCCCCC
Q 044996 124 KLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGSISPALRE---LDPSSFSGN 197 (678)
Q Consensus 124 ~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ip~~~~~---l~~~~~~gn 197 (678)
+|+|++|.+++..|..+.++++|++|+|++|.+++..+.. ..++|+.|+|++|++++..+..+.. +....+.+|
T Consensus 109 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 187 (285)
T 1ozn_A 109 TLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQN 187 (285)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCC
Confidence 9999999999888889999999999999999998665542 5778999999999998655544443 333345555
No 298
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.53 E-value=8.9e-15 Score=151.30 Aligned_cols=149 Identities=17% Similarity=0.214 Sum_probs=112.5
Q ss_pred CCcceEEecC-----------CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCccccc--CC-cccccCCCCccEE
Q 044996 35 ANWNGVLCHR-----------GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGP--MP-DLRQLGNGALRSV 100 (678)
Q Consensus 35 ~~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~--~p-~~~~~~~~~L~~L 100 (678)
|.|.+|.|+. .+++.|+|++|.+. .+|...+..+++|+.|+|++|.++.. +| .+..+ .+|++|
T Consensus 7 C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~--~~L~~L 83 (306)
T 2z66_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGT--TSLKYL 83 (306)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSC--SCCCEE
T ss_pred eCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccc--cccCEE
Confidence 5899999963 26889999999998 78877789999999999999998843 23 23333 668888
Q ss_pred EcccCccccccChhhhcCCcccceeeccccccccCCc-hhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCc
Q 044996 101 YLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIP-ESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNA 177 (678)
Q Consensus 101 ~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p-~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~ 177 (678)
+|++|.++ .+|.. +..+++|++|+|++|++++..+ ..+..+++|++|+|++|.+++.+|.. ...+|+.|++++|.
T Consensus 84 ~Ls~n~i~-~l~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 161 (306)
T 2z66_A 84 DLSFNGVI-TMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS 161 (306)
T ss_dssp ECCSCSEE-EEEEE-EETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCE
T ss_pred ECCCCccc-cChhh-cCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCc
Confidence 88888887 56665 7778888888888888876554 56777888888888888887776653 45678888888888
Q ss_pred ccc-cCchhhhc
Q 044996 178 LFG-SISPALRE 188 (678)
Q Consensus 178 l~g-~ip~~~~~ 188 (678)
+++ .+|..+..
T Consensus 162 l~~~~~~~~~~~ 173 (306)
T 2z66_A 162 FQENFLPDIFTE 173 (306)
T ss_dssp EGGGEECSCCTT
T ss_pred cccccchhHHhh
Confidence 776 45554443
No 299
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.53 E-value=2.5e-14 Score=145.60 Aligned_cols=155 Identities=19% Similarity=0.254 Sum_probs=98.3
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcccCccccccChhhhcCCcccc
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLR 123 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~ 123 (678)
.++..|+|++|.+.+ +++..+..+++|+.|+|++|.+.+..|. +..+ ++|++|+|++|++++ +++..|+++++|+
T Consensus 52 ~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~l~~n~l~~-~~~~~~~~l~~L~ 127 (276)
T 2z62_A 52 PELQVLDLSRCEIQT-IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGL--SSLQKLVAVETNLAS-LENFPIGHLKTLK 127 (276)
T ss_dssp TTCSEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTC--TTCCEEECTTSCCCC-STTCCCTTCTTCC
T ss_pred cCCcEEECCCCcCCc-cCHHHccCCcCCCEEECCCCccCccChhhhcCC--ccccEEECCCCCccc-cCchhcccCCCCC
Confidence 357777777777763 4444567777777777777777766553 3344 557777777777764 3332366667777
Q ss_pred eeecccccccc-CCchhhcCCCCCCeEeccCCcccccCCc-----------------------------cCCCCCcEEEe
Q 044996 124 KLLLADNQFNG-PIPESLTRLSRLVELRLEGNKFEGQIPD-----------------------------FQQKDLVSFNV 173 (678)
Q Consensus 124 ~l~l~~N~~~g-~~p~~~~~l~~L~~l~l~~N~l~g~~p~-----------------------------~~~~~l~~l~l 173 (678)
+|+|++|++++ .+|..++++++|++|+|++|.+++..+. +...+|+.|+|
T Consensus 128 ~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L 207 (276)
T 2z62_A 128 ELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELAL 207 (276)
T ss_dssp EEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEEC
T ss_pred EEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEEC
Confidence 77777777665 3566666677777777777666654322 12236778888
Q ss_pred ecCcccccCchhhh---cCCCCCCCCCCCCCCC
Q 044996 174 SNNALFGSISPALR---ELDPSSFSGNRDLCGE 203 (678)
Q Consensus 174 ~~N~l~g~ip~~~~---~l~~~~~~gn~~lc~~ 203 (678)
++|++++..+..+. ++....+.+|++.|..
T Consensus 208 ~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 208 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp CSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCT
T ss_pred CCCceeecCHhHhcccccccEEEccCCcccccC
Confidence 88888765443333 3445568888887754
No 300
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.52 E-value=3.1e-14 Score=155.74 Aligned_cols=157 Identities=19% Similarity=0.204 Sum_probs=123.0
Q ss_pred CcEEEEEeCCCCceeecChHHhh--------------------------------------cCCCCCEEEccCCcccccC
Q 044996 45 GKIWGLKLEDMGLQGNIDITILK--------------------------------------ELREMRTLSLMRNNLEGPM 86 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~--------------------------------------~l~~L~~L~Ls~N~l~g~~ 86 (678)
.++..|+|++|.+.+.+|..... ..++|+.|+|++|.+.+.+
T Consensus 212 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 291 (455)
T 3v47_A 212 TSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALL 291 (455)
T ss_dssp CEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEEC
T ss_pred ceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccc
Confidence 46888999999887766543211 1257889999999999887
Q ss_pred Cc-ccccCCCCccEEEcccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--
Q 044996 87 PD-LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF-- 163 (678)
Q Consensus 87 p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~-- 163 (678)
|. +..+ ++|+.|+|++|++++..|.. |.++++|++|+|++|.+++..|..+.++++|++|+|++|.+++..|..
T Consensus 292 ~~~~~~l--~~L~~L~Ls~n~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 368 (455)
T 3v47_A 292 KSVFSHF--TDLEQLTLAQNEINKIDDNA-FWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFL 368 (455)
T ss_dssp TTTTTTC--TTCCEEECTTSCCCEECTTT-TTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTT
T ss_pred hhhcccC--CCCCEEECCCCcccccChhH-hcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhcc
Confidence 74 4445 67999999999999766654 889999999999999999888889999999999999999998887763
Q ss_pred CCCCCcEEEeecCcccccCchhhh---cCCCCCCCCCCCCCCCC
Q 044996 164 QQKDLVSFNVSNNALFGSISPALR---ELDPSSFSGNRDLCGEP 204 (678)
Q Consensus 164 ~~~~l~~l~l~~N~l~g~ip~~~~---~l~~~~~~gn~~lc~~~ 204 (678)
.+++|+.|+|++|+|++..+..+. ++....+.+|+..|..+
T Consensus 369 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 369 GLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 568899999999999875444433 45556788888877543
No 301
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.51 E-value=4.2e-14 Score=154.16 Aligned_cols=155 Identities=22% Similarity=0.240 Sum_probs=110.9
Q ss_pred cEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-cccc-----------------------CCCCccEEE
Q 044996 46 KIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQL-----------------------GNGALRSVY 101 (678)
Q Consensus 46 ~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~-----------------------~~~~L~~L~ 101 (678)
++..|+|++|.+. .+++..+..|++|+.|+|++|.+.+..+. +..+ ..++|++|+
T Consensus 113 ~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~ 191 (440)
T 3zyj_A 113 NLNTLELFDNRLT-TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLN 191 (440)
T ss_dssp SCCEEECCSSCCS-SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEE
T ss_pred cCCEEECCCCcCC-eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeec
Confidence 5777888888877 55555677777888888888777654431 1111 114567777
Q ss_pred cccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCccc
Q 044996 102 LSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALF 179 (678)
Q Consensus 102 Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~ 179 (678)
|++|+|+ .+|. +..+++|+.|+|++|++++..|..|.++++|+.|+|++|.+++..|.. .+.+|+.|+|++|+|+
T Consensus 192 L~~n~l~-~~~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 268 (440)
T 3zyj_A 192 LAMCNLR-EIPN--LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT 268 (440)
T ss_dssp CTTSCCS-SCCC--CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCC
T ss_pred CCCCcCc-cccc--cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCC
Confidence 7777776 5662 667777888888888888777888888888888888888888766653 5678999999999998
Q ss_pred ccCchhhh---cCCCCCCCCCCCCCCCC
Q 044996 180 GSISPALR---ELDPSSFSGNRDLCGEP 204 (678)
Q Consensus 180 g~ip~~~~---~l~~~~~~gn~~lc~~~ 204 (678)
+..+..+. ++....+.+|++.|.+.
T Consensus 269 ~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 269 LLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp CCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred ccChhHhccccCCCEEEcCCCCccCCCC
Confidence 75555444 44556789999988653
No 302
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.51 E-value=5e-14 Score=144.49 Aligned_cols=143 Identities=17% Similarity=0.151 Sum_probs=104.3
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcccCccccccChhhhcCCcccc
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLR 123 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~ 123 (678)
.++..+++++++|. .+|..+ .+.|+.|+|++|.+++..|. +..+ ++|++|+|++|+|++ +|. .+.+++|+
T Consensus 10 ~~l~~l~~~~~~l~-~ip~~~---~~~l~~L~L~~N~l~~~~~~~~~~l--~~L~~L~L~~n~l~~-~~~--~~~l~~L~ 80 (290)
T 1p9a_G 10 ASHLEVNCDKRNLT-ALPPDL---PKDTTILHLSENLLYTFSLATLMPY--TRLTQLNLDRAELTK-LQV--DGTLPVLG 80 (290)
T ss_dssp TTCCEEECTTSCCS-SCCSCC---CTTCCEEECTTSCCSEEEGGGGTTC--TTCCEEECTTSCCCE-EEC--CSCCTTCC
T ss_pred CCccEEECCCCCCC-cCCCCC---CCCCCEEEcCCCcCCccCHHHhhcC--CCCCEEECCCCccCc-ccC--CCCCCcCC
Confidence 46888999999998 677543 37899999999999987663 4445 678888888888884 553 36778888
Q ss_pred eeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccccCchhhh---cCCCCCCCCC
Q 044996 124 KLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGSISPALR---ELDPSSFSGN 197 (678)
Q Consensus 124 ~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ip~~~~---~l~~~~~~gn 197 (678)
+|+|++|+++ .+|..+..+++|++|+|++|+|++..|.. .+.+|+.|+|++|+|++..+..+. ++....+.+|
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 8888888887 67777788888888888888887655542 566788888888888765444333 3333445555
No 303
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.51 E-value=4.1e-14 Score=155.83 Aligned_cols=150 Identities=23% Similarity=0.260 Sum_probs=128.1
Q ss_pred CcceEEecC-----------CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcc
Q 044996 36 NWNGVLCHR-----------GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLS 103 (678)
Q Consensus 36 ~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls 103 (678)
.|..|.|.. ..+..|+|++|.+.+-. +..|..+++|+.|+|++|.+++..|. +..+ .+|++|+|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l--~~L~~L~L~ 88 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLN-QDEFASFPHLEELELNENIVSAVEPGAFNNL--FNLRTLGLR 88 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEEC-TTTTTTCTTCCEEECTTSCCCEECTTTTTTC--TTCCEEECC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceEC-HhHccCCCCCCEEECCCCccCEeChhhhhCC--ccCCEEECC
Confidence 478899963 25789999999999644 45699999999999999999998773 5555 789999999
Q ss_pred cCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCccccc
Q 044996 104 NNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGS 181 (678)
Q Consensus 104 ~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ 181 (678)
+|+++ .+|...|.++++|++|+|++|++++..|..|.++++|+.|+|++|.+++..|.. .+.+|+.|+|++|.+++.
T Consensus 89 ~n~l~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 167 (477)
T 2id5_A 89 SNRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSI 167 (477)
T ss_dssp SSCCC-SCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSC
T ss_pred CCcCC-ccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCccc
Confidence 99999 677777899999999999999999999999999999999999999999877753 568999999999999875
Q ss_pred CchhhhcC
Q 044996 182 ISPALREL 189 (678)
Q Consensus 182 ip~~~~~l 189 (678)
.+..+..+
T Consensus 168 ~~~~l~~l 175 (477)
T 2id5_A 168 PTEALSHL 175 (477)
T ss_dssp CHHHHTTC
T ss_pred ChhHhccc
Confidence 55555443
No 304
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.51 E-value=8.6e-15 Score=134.32 Aligned_cols=124 Identities=23% Similarity=0.273 Sum_probs=75.2
Q ss_pred cEEEEEeCCCCce-eecChHHhhcCCCCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCcccce
Q 044996 46 KIWGLKLEDMGLQ-GNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRK 124 (678)
Q Consensus 46 ~v~~l~l~~~~l~-g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~ 124 (678)
+++.|+|++|.+. |.+|. .+..+++|+.|+|++|.+++. +.+..+ ++|++|+|++|++++.+|.. +..+++|++
T Consensus 18 ~l~~L~l~~n~l~~~~~~~-~~~~l~~L~~L~l~~n~l~~~-~~~~~l--~~L~~L~Ls~n~i~~~~~~~-~~~l~~L~~ 92 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEG-LTDEFEELEFLSTINVGLTSI-ANLPKL--NKLKKLELSDNRVSGGLEVL-AEKCPNLTH 92 (149)
T ss_dssp GCSEEECTTCBCBTTBCCS-CCTTCTTCCEEECTTSCCCCC-TTCCCC--TTCCEEECCSSCCCSCTHHH-HHHCTTCCE
T ss_pred cCeEEEccCCcCChhHHHH-HHhhcCCCcEEECcCCCCCCc-hhhhcC--CCCCEEECCCCcccchHHHH-hhhCCCCCE
Confidence 4566666666666 56654 456666666666666666654 444444 55666666666666555543 555666666
Q ss_pred eeccccccccC-CchhhcCCCCCCeEeccCCcccccCC---c--cCCCCCcEEEee
Q 044996 125 LLLADNQFNGP-IPESLTRLSRLVELRLEGNKFEGQIP---D--FQQKDLVSFNVS 174 (678)
Q Consensus 125 l~l~~N~~~g~-~p~~~~~l~~L~~l~l~~N~l~g~~p---~--~~~~~l~~l~l~ 174 (678)
|+|++|.+++. .|..+..+++|++|++++|.+++..+ . ..+++|+.|+++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 66666666652 34566666666666666666665544 1 134566666554
No 305
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.51 E-value=2.6e-14 Score=137.76 Aligned_cols=147 Identities=12% Similarity=0.195 Sum_probs=116.6
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCcccce
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRK 124 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~ 124 (678)
.+++.|+|+++++. .++ .+..+++|+.|+|++|.+.. ++.+..+ ++|++|+|++|++++..|.. |+.+++|++
T Consensus 44 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~l~~n~~~~-~~~l~~l--~~L~~L~l~~n~l~~~~~~~-l~~l~~L~~ 116 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT--GIEYAHNIKDLTINNIHATN-YNPISGL--SNLERLRIMGKDVTSDKIPN-LSGLTSLTL 116 (197)
T ss_dssp HTCCEEEEESSCCS-CCT--TGGGCTTCSEEEEESCCCSC-CGGGTTC--TTCCEEEEECTTCBGGGSCC-CTTCTTCCE
T ss_pred CCccEEeccCCCcc-ChH--HHhcCCCCCEEEccCCCCCc-chhhhcC--CCCCEEEeECCccCcccChh-hcCCCCCCE
Confidence 35889999999988 676 38889999999999997653 3455555 77999999999999877766 899999999
Q ss_pred eeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc-CCCCCcEEEeecCcccccCc-hhhhcCCCCCCCCCC
Q 044996 125 LLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF-QQKDLVSFNVSNNALFGSIS-PALRELDPSSFSGNR 198 (678)
Q Consensus 125 l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~-~~~~l~~l~l~~N~l~g~ip-~~~~~l~~~~~~gn~ 198 (678)
|+|++|++++..|..++.+++|++|+|++|.+.+.+|.. .+++|+.|++++|.+++..+ ..+.++....+.+|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECTTBCCCCCTTGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccHhhcCCCCCCEEECCCCCCcChHHhccCCCCCEEEeeCcc
Confidence 999999999989999999999999999999866677754 67889999999999987321 122333444455553
No 306
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.51 E-value=2.1e-14 Score=163.56 Aligned_cols=157 Identities=18% Similarity=0.225 Sum_probs=130.0
Q ss_pred cEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCccccee
Q 044996 46 KIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKL 125 (678)
Q Consensus 46 ~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l 125 (678)
.+..+++..+++.+..+...+..++.|+.++++.|.+.+..|.... ..+.|+.|+|++|++.+.++++.|..+++|++|
T Consensus 421 ~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~-~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L 499 (635)
T 4g8a_A 421 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFN-GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 499 (635)
T ss_dssp TCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTT-TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred cccchhhhhccccccccccccccccccccccccccccccccccccc-cchhhhhhhhhhcccccccCchhhhhccccCEE
Confidence 4556666666666555555688899999999999999998875322 227799999999987655554569999999999
Q ss_pred eccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccccCchhhhcC----CCCCCCCCCC
Q 044996 126 LLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGSISPALREL----DPSSFSGNRD 199 (678)
Q Consensus 126 ~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ip~~~~~l----~~~~~~gn~~ 199 (678)
+|++|++++.+|..|.++++|++|+|++|+|++..|.. .+++|+.|+|++|+|++..|..+..+ ....+.+||+
T Consensus 500 ~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~ 579 (635)
T 4g8a_A 500 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 579 (635)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCB
T ss_pred ECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCC
Confidence 99999999999999999999999999999999877763 57899999999999999999887654 4457999999
Q ss_pred CCCC
Q 044996 200 LCGE 203 (678)
Q Consensus 200 lc~~ 203 (678)
.|.+
T Consensus 580 ~C~C 583 (635)
T 4g8a_A 580 ACTC 583 (635)
T ss_dssp CCSG
T ss_pred cccC
Confidence 9964
No 307
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.50 E-value=1.7e-14 Score=135.27 Aligned_cols=130 Identities=22% Similarity=0.224 Sum_probs=102.8
Q ss_pred CcEEEEEeCCCCce-eecChHHhhcCCCCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCcccc
Q 044996 45 GKIWGLKLEDMGLQ-GNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLR 123 (678)
Q Consensus 45 ~~v~~l~l~~~~l~-g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~ 123 (678)
.+++.|+|++|.+. |.+|. .+..+++|+.|+|++|.+++. +.+..+ ++|++|+|++|++++.+|.. +.++++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~-~~~~l~~L~~L~l~~n~l~~~-~~~~~l--~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~ 98 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEG-LTAEFVNLEFLSLINVGLISV-SNLPKL--PKLKKLELSENRIFGGLDML-AEKLPNLT 98 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSS-CCGGGGGCCEEEEESSCCCCC-SSCCCC--SSCCEEEEESCCCCSCCCHH-HHHCTTCC
T ss_pred ccCCEEECCCCCCChhhHHH-HHHhCCCCCEEeCcCCCCCCh-hhhccC--CCCCEEECcCCcCchHHHHH-HhhCCCCC
Confidence 46888888888887 77875 367888899999999988876 655555 67889999999988777754 77788999
Q ss_pred eeeccccccccC-CchhhcCCCCCCeEeccCCcccccCC----c-cCCCCCcEEEeecCccc
Q 044996 124 KLLLADNQFNGP-IPESLTRLSRLVELRLEGNKFEGQIP----D-FQQKDLVSFNVSNNALF 179 (678)
Q Consensus 124 ~l~l~~N~~~g~-~p~~~~~l~~L~~l~l~~N~l~g~~p----~-~~~~~l~~l~l~~N~l~ 179 (678)
+|+|++|.+++. .+..+..+++|++|+|++|.+++..+ . ..+++|+.|++++|.+.
T Consensus 99 ~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 99 HLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp EEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred EEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 999999988863 23678888899999999998886655 2 25678888888888774
No 308
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.50 E-value=2.6e-14 Score=162.31 Aligned_cols=135 Identities=18% Similarity=0.241 Sum_probs=80.9
Q ss_pred hhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcccCccccc-cCh-hhhcCCcccceeeccccccccCCchhhcC
Q 044996 66 LKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSNNRFSGE-IPT-DAFDGMTSLRKLLLADNQFNGPIPESLTR 142 (678)
Q Consensus 66 l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~-ip~-~~~~~l~~L~~l~l~~N~~~g~~p~~~~~ 142 (678)
+..+++|+.|+|++|.+.+.+|. +..+ ++|+.|+|++|.+++. +|. ..+..+++|+.|+|++|++++..|..|..
T Consensus 421 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 498 (606)
T 3t6q_A 421 FQNLHLLKVLNLSHSLLDISSEQLFDGL--PALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTS 498 (606)
T ss_dssp TTTCTTCCEEECTTCCCBTTCTTTTTTC--TTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTT
T ss_pred hhCcccCCEEECCCCccCCcCHHHHhCC--CCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhcc
Confidence 44444444444444444444442 2222 4566666666666542 211 23566666667777777776666667777
Q ss_pred CCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccccCchhh---hcCCCCCCCCCCCCCCC
Q 044996 143 LSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGSISPAL---RELDPSSFSGNRDLCGE 203 (678)
Q Consensus 143 l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ip~~~---~~l~~~~~~gn~~lc~~ 203 (678)
+++|++|+|++|++++.+|.. .++.| .|++++|++++.+|..+ .++....+.+|++.|.+
T Consensus 499 l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 563 (606)
T 3t6q_A 499 LKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTC 563 (606)
T ss_dssp CTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSG
T ss_pred ccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccC
Confidence 777777777777777666653 45566 77777777776666543 34556678888887743
No 309
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.50 E-value=5.9e-14 Score=153.54 Aligned_cols=155 Identities=21% Similarity=0.207 Sum_probs=116.0
Q ss_pred cEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-cccc-----------------------CCCCccEEE
Q 044996 46 KIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQL-----------------------GNGALRSVY 101 (678)
Q Consensus 46 ~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~-----------------------~~~~L~~L~ 101 (678)
++..|+|++|.+. .+++..+..|++|+.|+|++|++.+..+. +..+ ...+|++|+
T Consensus 124 ~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~ 202 (452)
T 3zyi_A 124 SLNTLELFDNWLT-VIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLN 202 (452)
T ss_dssp TCCEEECCSSCCS-BCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEE
T ss_pred cCCEEECCCCcCC-ccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEE
Confidence 5778888888887 55556677888888888888887754431 1111 115677777
Q ss_pred cccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCccc
Q 044996 102 LSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALF 179 (678)
Q Consensus 102 Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~ 179 (678)
|++|+|+ .+| . +..+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..|.. .+.+|+.|+|++|+|+
T Consensus 203 L~~n~l~-~~~-~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 279 (452)
T 3zyi_A 203 LGMCNIK-DMP-N-LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLS 279 (452)
T ss_dssp CTTSCCS-SCC-C-CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCCccc-ccc-c-ccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCC
Confidence 7777777 355 3 677888888888888888888888999999999999999998877763 5678999999999998
Q ss_pred ccCchhhh---cCCCCCCCCCCCCCCCC
Q 044996 180 GSISPALR---ELDPSSFSGNRDLCGEP 204 (678)
Q Consensus 180 g~ip~~~~---~l~~~~~~gn~~lc~~~ 204 (678)
+..+..+. ++....+.+|++.|.+.
T Consensus 280 ~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 280 SLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp CCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred ccChHHhccccCCCEEEccCCCcCCCCC
Confidence 65554443 45566789999988653
No 310
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.50 E-value=5e-14 Score=143.37 Aligned_cols=139 Identities=21% Similarity=0.304 Sum_probs=118.9
Q ss_pred cEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCC-cccccCCCCccEEEcccCccccccChhhhcCCcccce
Q 044996 46 KIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMP-DLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRK 124 (678)
Q Consensus 46 ~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~ 124 (678)
.++.|+|++|.+.+ +++..+..+++|+.|+|++|++.+..+ .+..+ ++|++|+|++|++++..| ..|.++++|++
T Consensus 29 ~l~~L~ls~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~ 104 (276)
T 2z62_A 29 STKNLDLSFNPLRH-LGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSL--SHLSTLILTGNPIQSLAL-GAFSGLSSLQK 104 (276)
T ss_dssp TCCEEECTTCCCCE-ECTTTTTTCTTCSEEECTTCCCCEECTTTTTTC--TTCCEEECTTCCCCEECT-TTTTTCTTCCE
T ss_pred CccEEECCCCcccc-cCHhHhccccCCcEEECCCCcCCccCHHHccCC--cCCCEEECCCCccCccCh-hhhcCCccccE
Confidence 58899999999985 444568999999999999999998776 35555 789999999999996555 45999999999
Q ss_pred eeccccccccCCchhhcCCCCCCeEeccCCcccc-cCCcc--CCCCCcEEEeecCcccccCchhhhc
Q 044996 125 LLLADNQFNGPIPESLTRLSRLVELRLEGNKFEG-QIPDF--QQKDLVSFNVSNNALFGSISPALRE 188 (678)
Q Consensus 125 l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g-~~p~~--~~~~l~~l~l~~N~l~g~ip~~~~~ 188 (678)
|+|++|++++..+..++++++|++|+|++|.+++ .+|.. .+++|+.|++++|++++..+..+..
T Consensus 105 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 171 (276)
T 2z62_A 105 LVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRV 171 (276)
T ss_dssp EECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHH
T ss_pred EECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhh
Confidence 9999999998888789999999999999999987 46763 5689999999999999876665543
No 311
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.50 E-value=3e-14 Score=168.04 Aligned_cols=150 Identities=19% Similarity=0.145 Sum_probs=125.9
Q ss_pred CCCcceEEecCCcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCC--cccccCCCCccEEEcccCcccccc
Q 044996 34 GANWNGVLCHRGKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMP--DLRQLGNGALRSVYLSNNRFSGEI 111 (678)
Q Consensus 34 ~~~w~gv~C~~~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p--~~~~~~~~~L~~L~Ls~N~l~G~i 111 (678)
.++|..|.+-..+++.|+|++|.+++-.+ ..+.+|++|+.|+|++|.+.+.++ .+..+ ++|++|+|++|++++..
T Consensus 13 ~~~L~~vP~lp~~l~~LdLs~N~i~~i~~-~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L--~~L~~L~Ls~N~l~~~~ 89 (844)
T 3j0a_A 13 FCNLTQVPQVLNTTERLLLSFNYIRTVTA-SSFPFLEQLQLLELGSQYTPLTIDKEAFRNL--PNLRILDLGSSKIYFLH 89 (844)
T ss_dssp CCCSSCCCSSCTTCCEEEEESCCCCEECS-SSCSSCCSCSEEEECTTCCCCEECTTTTSSC--TTCCEEECTTCCCCEEC
T ss_pred CCCCCCCCCCCCCcCEEECCCCcCCccCh-hHCcccccCeEEeCCCCCCccccCHHHhcCC--CCCCEEECCCCcCcccC
Confidence 34677777745789999999999986555 458999999999999998888774 35555 77999999999999777
Q ss_pred ChhhhcCCcccceeeccccccccCCchh--hcCCCCCCeEeccCCcccccCCc---cCCCCCcEEEeecCcccccCchhh
Q 044996 112 PTDAFDGMTSLRKLLLADNQFNGPIPES--LTRLSRLVELRLEGNKFEGQIPD---FQQKDLVSFNVSNNALFGSISPAL 186 (678)
Q Consensus 112 p~~~~~~l~~L~~l~l~~N~~~g~~p~~--~~~l~~L~~l~l~~N~l~g~~p~---~~~~~l~~l~l~~N~l~g~ip~~~ 186 (678)
|.. |+++++|++|+|++|.+++.+|.. |+++++|++|+|++|.+++..|. ..+++|+.|+|++|.+++..|..+
T Consensus 90 p~~-~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l 168 (844)
T 3j0a_A 90 PDA-FQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHEL 168 (844)
T ss_dssp TTS-SCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGG
T ss_pred HhH-ccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHc
Confidence 755 899999999999999999988776 89999999999999999987664 267899999999999998888765
Q ss_pred h
Q 044996 187 R 187 (678)
Q Consensus 187 ~ 187 (678)
.
T Consensus 169 ~ 169 (844)
T 3j0a_A 169 E 169 (844)
T ss_dssp H
T ss_pred c
Confidence 4
No 312
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.50 E-value=1.4e-14 Score=150.41 Aligned_cols=148 Identities=22% Similarity=0.179 Sum_probs=100.4
Q ss_pred CcEEEEEeCCCCceeecChHHhhcC-----CCCCEEEccCCcccccCC-cccccCCCCccEEEcccCcccccc--Chh-h
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKEL-----REMRTLSLMRNNLEGPMP-DLRQLGNGALRSVYLSNNRFSGEI--PTD-A 115 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l-----~~L~~L~Ls~N~l~g~~p-~~~~~~~~~L~~L~Ls~N~l~G~i--p~~-~ 115 (678)
.++..|+|++|.+.+. | ..+..+ ++|+.|+|++|++.+..| .+..+ ++|++|+|++|++.|.+ |.. .
T Consensus 121 ~~L~~L~Ls~N~l~~~-~-~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~~ 196 (312)
T 1wwl_A 121 PDLNILNLRNVSWATR-D-AWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF--PALSTLDLSDNPELGERGLISALC 196 (312)
T ss_dssp CCCSEEEEESCBCSSS-S-SHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCC--SSCCEEECCSCTTCHHHHHHHHSC
T ss_pred CCccEEEccCCCCcch-h-HHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccC--CCCCEEECCCCCcCcchHHHHHHH
Confidence 4677888888888765 4 345555 788888888888877765 34444 66888888888877663 333 1
Q ss_pred hcCCcccceeecccccccc--CCch-hhcCCCCCCeEeccCCcccccCCcc---CCCCCcEEEeecCcccccCchhhh-c
Q 044996 116 FDGMTSLRKLLLADNQFNG--PIPE-SLTRLSRLVELRLEGNKFEGQIPDF---QQKDLVSFNVSNNALFGSISPALR-E 188 (678)
Q Consensus 116 ~~~l~~L~~l~l~~N~~~g--~~p~-~~~~l~~L~~l~l~~N~l~g~~p~~---~~~~l~~l~l~~N~l~g~ip~~~~-~ 188 (678)
+.++++|++|+|++|++++ .++. .+.++++|++|+|++|.|++.+|.. ...+|+.|+|++|.|+ .+|..+. +
T Consensus 197 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~~~ 275 (312)
T 1wwl_A 197 PLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLPAK 275 (312)
T ss_dssp TTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCCSE
T ss_pred hccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhccCC
Confidence 2777888888888888873 3333 3457788888888888888766532 3467888888888887 6666543 3
Q ss_pred CCCCCCCCC
Q 044996 189 LDPSSFSGN 197 (678)
Q Consensus 189 l~~~~~~gn 197 (678)
+....+.+|
T Consensus 276 L~~L~Ls~N 284 (312)
T 1wwl_A 276 LSVLDLSYN 284 (312)
T ss_dssp EEEEECCSS
T ss_pred ceEEECCCC
Confidence 333344444
No 313
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.49 E-value=1.3e-14 Score=169.29 Aligned_cols=147 Identities=20% Similarity=0.319 Sum_probs=127.2
Q ss_pred CcEEEEEeCCCCcee-----------------ecChHHhh--cCCCCCEEEccCCcccccCCc-ccccCCCCccEEEccc
Q 044996 45 GKIWGLKLEDMGLQG-----------------NIDITILK--ELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSN 104 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g-----------------~~~~~~l~--~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~ 104 (678)
.++..|+|++|.|+| .+|.. ++ +|++|+.|+|++|++.|.+|. +..+ ++|+.|+|++
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~-l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L--~~L~~L~Ls~ 524 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEE-LSWSNLKDLTDVELYNCPNMTQLPDFLYDL--PELQSLNIAC 524 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSC-CCGGGCTTCCEEEEESCTTCCSCCGGGGGC--SSCCEEECTT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCChh-hhhccCCCCCEEECcCCCCCccChHHHhCC--CCCCEEECcC
Confidence 579999999999998 48865 55 999999999999999999994 6666 7899999999
Q ss_pred Cc-ccc-ccChhhhcCCc-------ccceeeccccccccCCch--hhcCCCCCCeEeccCCcccccCCcc-CCCCCcEEE
Q 044996 105 NR-FSG-EIPTDAFDGMT-------SLRKLLLADNQFNGPIPE--SLTRLSRLVELRLEGNKFEGQIPDF-QQKDLVSFN 172 (678)
Q Consensus 105 N~-l~G-~ip~~~~~~l~-------~L~~l~l~~N~~~g~~p~--~~~~l~~L~~l~l~~N~l~g~~p~~-~~~~l~~l~ 172 (678)
|+ |+| .||.. +++++ +|+.|+|++|+|+ .+|. .|+++++|+.|+|++|.|+ .+|.+ .+++|+.|+
T Consensus 525 N~~lsg~~iP~~-i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L~ 601 (876)
T 4ecn_A 525 NRGISAAQLKAD-WTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKLTDLK 601 (876)
T ss_dssp CTTSCHHHHHHH-HHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSEESEEE
T ss_pred CCCcccccchHH-HHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCcceEEE
Confidence 98 999 99976 66665 9999999999999 8999 9999999999999999999 88854 567899999
Q ss_pred eecCcccccCchhhhcCC----CCCCCCCC
Q 044996 173 VSNNALFGSISPALRELD----PSSFSGNR 198 (678)
Q Consensus 173 l~~N~l~g~ip~~~~~l~----~~~~~gn~ 198 (678)
|++|+++ .+|..+..+. ...+.+|.
T Consensus 602 Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~ 630 (876)
T 4ecn_A 602 LDYNQIE-EIPEDFCAFTDQVEGLGFSHNK 630 (876)
T ss_dssp CCSSCCS-CCCTTSCEECTTCCEEECCSSC
T ss_pred CcCCccc-cchHHHhhccccCCEEECcCCC
Confidence 9999999 8998776544 34566664
No 314
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.49 E-value=3.4e-14 Score=159.90 Aligned_cols=152 Identities=20% Similarity=0.222 Sum_probs=125.4
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCccccc--CC-cccccCCCCccEEEcccCccccccChhhhcCCcc
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGP--MP-DLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTS 121 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~--~p-~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~ 121 (678)
.++..|+|++|.+.+.+|. .+..+++|+.|+|++|++++. +| .+..+ ++|+.|+|++|++++.+|...|..+++
T Consensus 353 ~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l--~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 353 SSFTFLNFTQNVFTDSVFQ-GCSTLKRLQTLILQRNGLKNFFKVALMTKNM--SSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp CCCCEEECCSSCCCTTTTT-TCCSCSSCCEEECCSSCCCBTTHHHHTTTTC--TTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred CCceEEECCCCccccchhh-hhcccCCCCEEECCCCCcCCcccchhhhcCC--CCCCEEECCCCcCCCccChhhhcCccc
Confidence 5688999999999987764 588999999999999999873 33 24455 779999999999998899877889999
Q ss_pred cceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccccCchh-hh---cCCCCCCC
Q 044996 122 LRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGSISPA-LR---ELDPSSFS 195 (678)
Q Consensus 122 L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ip~~-~~---~l~~~~~~ 195 (678)
|+.|+|++|++++.+|..+. ++|++|+|++|+|+ .+|.. .+++|+.|+|++|+|+ .+|.. +. ++....+.
T Consensus 430 L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~ 505 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLH 505 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECC
T ss_pred CCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEec
Confidence 99999999999988887665 78999999999998 67763 6789999999999998 57765 44 44556789
Q ss_pred CCCCCCCC
Q 044996 196 GNRDLCGE 203 (678)
Q Consensus 196 gn~~lc~~ 203 (678)
+|++.|.+
T Consensus 506 ~N~~~c~c 513 (562)
T 3a79_B 506 DNPWDCTC 513 (562)
T ss_dssp SCCBCCCH
T ss_pred CCCcCCCc
Confidence 99988853
No 315
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.49 E-value=2.9e-14 Score=157.30 Aligned_cols=148 Identities=22% Similarity=0.181 Sum_probs=94.1
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc--cccc-------------CCCCccEEEcccCcccc
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD--LRQL-------------GNGALRSVYLSNNRFSG 109 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~--~~~~-------------~~~~L~~L~Ls~N~l~G 109 (678)
.++..|+|++|.+.+..| +..+++|+.|+|++|.|++..+. +..+ ..++|+.|+|++|.|++
T Consensus 58 ~~L~~L~Ls~N~l~~~~~---l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~~~~~l~~L~~L~L~~N~l~~ 134 (487)
T 3oja_A 58 TKLELLNLSSNVLYETLD---LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITM 134 (487)
T ss_dssp TTCCEEECTTSCCEEEEE---CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCEEECCCSSCEEEECCSSCCCS
T ss_pred CCCCEEEeeCCCCCCCcc---cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCCCccccCCCCEEECCCCCCCC
Confidence 346666666666665443 55566666666666665543210 0000 01456777777777776
Q ss_pred ccChhhhcCCcccceeeccccccccCCchhhc-CCCCCCeEeccCCcccccCCccCCCCCcEEEeecCcccccCchhhhc
Q 044996 110 EIPTDAFDGMTSLRKLLLADNQFNGPIPESLT-RLSRLVELRLEGNKFEGQIPDFQQKDLVSFNVSNNALFGSISPALRE 188 (678)
Q Consensus 110 ~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~-~l~~L~~l~l~~N~l~g~~p~~~~~~l~~l~l~~N~l~g~ip~~~~~ 188 (678)
..|.. |+++++|+.|+|++|.|++.+|..+. .+++|+.|+|++|.|++..+...+++|+.|+|++|.|++..| .+..
T Consensus 135 ~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~ 212 (487)
T 3oja_A 135 LRDLD-EGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAFMGP-EFQS 212 (487)
T ss_dssp GGGBC-GGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCEECG-GGGG
T ss_pred CCchh-hcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccccccCCCCCEEECCCCCCCCCCH-hHcC
Confidence 55544 77788888888888888887777775 678888888888888776555567788888888888877433 3443
Q ss_pred ---CCCCCCCCC
Q 044996 189 ---LDPSSFSGN 197 (678)
Q Consensus 189 ---l~~~~~~gn 197 (678)
|....+.+|
T Consensus 213 l~~L~~L~Ls~N 224 (487)
T 3oja_A 213 AAGVTWISLRNN 224 (487)
T ss_dssp GTTCSEEECTTS
T ss_pred CCCccEEEecCC
Confidence 333345555
No 316
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.48 E-value=2.7e-14 Score=159.06 Aligned_cols=151 Identities=24% Similarity=0.267 Sum_probs=99.5
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccc--cCCc-ccccCCCCccEEEcccCccccccChhhhcCCcc
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEG--PMPD-LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTS 121 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g--~~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~ 121 (678)
..+..|+|++|.+.+.+|. .+..+++|+.|+|++|++++ .+|. +..+ ++|++|+|++|++++.+|...|..+++
T Consensus 324 ~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l--~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 324 SPFLHLDFSNNLLTDTVFE-NCGHLTELETLILQMNQLKELSKIAEMTTQM--KSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp CCCCEEECCSSCCCTTTTT-TCCCCSSCCEEECCSSCCCBHHHHHHHHTTC--TTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred CcccEEEeECCccChhhhh-hhccCCCCCEEEccCCccCccccchHHHhhC--CCCCEEECCCCcCCcccccchhccCcc
Confidence 3466677777777665553 36667777777777777765 3442 3344 567777777777776677655667777
Q ss_pred cceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccccCchh-hh---cCCCCCCC
Q 044996 122 LRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGSISPA-LR---ELDPSSFS 195 (678)
Q Consensus 122 L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ip~~-~~---~l~~~~~~ 195 (678)
|+.|+|++|++++.+|..+. ++|+.|+|++|+++ .+|.. .+++|+.|+|++|+|+ .+|.. +. ++....+.
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~ 476 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLH 476 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECC
T ss_pred CCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECc
Confidence 77777777777776666554 67777777777777 66652 5667777778777777 46654 43 33445677
Q ss_pred CCCCCCC
Q 044996 196 GNRDLCG 202 (678)
Q Consensus 196 gn~~lc~ 202 (678)
+|+..|.
T Consensus 477 ~N~~~c~ 483 (520)
T 2z7x_B 477 TNPWDCS 483 (520)
T ss_dssp SSCBCCC
T ss_pred CCCCccc
Confidence 7777664
No 317
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.48 E-value=1.2e-13 Score=150.94 Aligned_cols=140 Identities=23% Similarity=0.300 Sum_probs=102.3
Q ss_pred CcceEEecC-----------CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcc
Q 044996 36 NWNGVLCHR-----------GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLS 103 (678)
Q Consensus 36 ~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls 103 (678)
.|..|.|.. .++..|+|++|++.+-.+ ..|.+|++|+.|+|++|++++..|. +..+ ++|++|+|+
T Consensus 55 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l--~~L~~L~L~ 131 (452)
T 3zyi_A 55 QFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQA-DTFRHLHHLEVLQLGRNSIRQIEVGAFNGL--ASLNTLELF 131 (452)
T ss_dssp SSCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECT-TTTTTCTTCCEEECCSSCCCEECTTTTTTC--TTCCEEECC
T ss_pred CCcEEEECCCCcCccCCCCCCCccEEECcCCcCceECH-HHcCCCCCCCEEECCCCccCCcChhhccCc--ccCCEEECC
Confidence 467899963 258899999999986544 5689999999999999999987763 4445 679999999
Q ss_pred cCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc---CCCCCcEEEeecCccc
Q 044996 104 NNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF---QQKDLVSFNVSNNALF 179 (678)
Q Consensus 104 ~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~---~~~~l~~l~l~~N~l~ 179 (678)
+|+|+ .+|+..|.++++|++|+|++|++++..+..|.++++|+.|+|++|+..+.+|.. .+.+|+.|+|++|+++
T Consensus 132 ~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~ 209 (452)
T 3zyi_A 132 DNWLT-VIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK 209 (452)
T ss_dssp SSCCS-BCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCS
T ss_pred CCcCC-ccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccc
Confidence 99998 566666888999999999999888666656666666666666665544454432 3344445555544444
No 318
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.48 E-value=6.5e-14 Score=161.36 Aligned_cols=138 Identities=21% Similarity=0.258 Sum_probs=120.0
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcccCccccccChhhhcCCcccc
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLR 123 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~ 123 (678)
.+++.|+|++|.+.+ +++..+.++++|+.|+|++|.+++..|. +..+ ++|++|+|++|+++ .+|+..|+++++|+
T Consensus 25 ~~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l--~~L~~L~L~~n~l~-~l~~~~~~~l~~L~ 100 (680)
T 1ziw_A 25 TNITVLNLTHNQLRR-LPAANFTRYSQLTSLDVGFNTISKLEPELCQKL--PMLKVLNLQHNELS-QLSDKTFAFCTNLT 100 (680)
T ss_dssp TTCSEEECCSSCCCC-CCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHC--TTCCEEECCSSCCC-CCCTTTTTTCTTCS
T ss_pred CCCcEEECCCCCCCC-cCHHHHhCCCcCcEEECCCCccCccCHHHHhcc--cCcCEEECCCCccC-ccChhhhccCCCCC
Confidence 368999999999985 5666799999999999999999998885 4556 77999999999999 67776699999999
Q ss_pred eeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccccCchhh
Q 044996 124 KLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGSISPAL 186 (678)
Q Consensus 124 ~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ip~~~ 186 (678)
+|+|++|++++..|..|+++++|++|+|++|.+++..|.. .+++|+.|++++|.+++..|..+
T Consensus 101 ~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 165 (680)
T 1ziw_A 101 ELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEEL 165 (680)
T ss_dssp EEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHH
T ss_pred EEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHh
Confidence 9999999999888889999999999999999999887764 67899999999999988777654
No 319
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.48 E-value=6.9e-14 Score=158.83 Aligned_cols=140 Identities=20% Similarity=0.237 Sum_probs=122.3
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcccCccccccChhhhcCCcccc
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLR 123 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~ 123 (678)
.+++.|+|++|.+.+-. +..+.++++|+.|+|++|++++..|. +..+ .+|++|+|++|++++..|.. |+++++|+
T Consensus 32 ~~l~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l--~~L~~L~Ls~n~l~~~~p~~-~~~l~~L~ 107 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILK-SYSFSNFSELQWLDLSRCEIETIEDKAWHGL--HHLSNLILTGNPIQSFSPGS-FSGLTSLE 107 (606)
T ss_dssp TTCCEEECTTSCCCEEC-TTTTTTCTTCCEEECTTCCCCEECTTTTTTC--TTCCEEECTTCCCCCCCTTS-STTCTTCC
T ss_pred CCcCEEECCCCCcCEeC-hhhccCCccCcEEeCCCCcccccCHHHhhch--hhcCEeECCCCcccccChhh-cCCcccCC
Confidence 46899999999998544 45699999999999999999998774 5556 78999999999999766755 99999999
Q ss_pred eeeccccccccCCchhhcCCCCCCeEeccCCcccc-cCCcc--CCCCCcEEEeecCcccccCchhhhc
Q 044996 124 KLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEG-QIPDF--QQKDLVSFNVSNNALFGSISPALRE 188 (678)
Q Consensus 124 ~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g-~~p~~--~~~~l~~l~l~~N~l~g~ip~~~~~ 188 (678)
+|+|++|.+++..|..++++++|++|+|++|.+++ .+|.. .+++|+.|++++|++++..|..+..
T Consensus 108 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 175 (606)
T 3vq2_A 108 NLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQF 175 (606)
T ss_dssp EEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHH
T ss_pred EEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhh
Confidence 99999999998888899999999999999999986 67874 6789999999999999987766543
No 320
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.48 E-value=1.3e-13 Score=132.50 Aligned_cols=124 Identities=27% Similarity=0.405 Sum_probs=101.4
Q ss_pred EEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCC-cccccCCCCccEEEcccCccccccChhhhcCCcccceeecc
Q 044996 50 LKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMP-DLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLA 128 (678)
Q Consensus 50 l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~ 128 (678)
+++++++|. .+|..+ .++|+.|+|++|+|+ .+| .+..+ .+|+.|+|++|+|++ +++..|.++++|+.|+|+
T Consensus 15 l~~~~~~l~-~ip~~~---~~~l~~L~L~~n~i~-~ip~~~~~l--~~L~~L~Ls~N~i~~-i~~~~f~~l~~L~~L~Ls 86 (193)
T 2wfh_A 15 VRCSNKGLK-VLPKGI---PRDVTELYLDGNQFT-LVPKELSNY--KHLTLIDLSNNRIST-LSNQSFSNMTQLLTLILS 86 (193)
T ss_dssp EECTTSCCS-SCCSCC---CTTCCEEECCSSCCC-SCCGGGGGC--TTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECC
T ss_pred EEcCCCCCC-cCCCCC---CCCCCEEECCCCcCc-hhHHHhhcc--cCCCEEECCCCcCCE-eCHhHccCCCCCCEEECC
Confidence 455666666 666432 368999999999998 455 45555 779999999999995 555569999999999999
Q ss_pred ccccccCCchhhcCCCCCCeEeccCCcccccCCc-c-CCCCCcEEEeecCccccc
Q 044996 129 DNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPD-F-QQKDLVSFNVSNNALFGS 181 (678)
Q Consensus 129 ~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~-~-~~~~l~~l~l~~N~l~g~ 181 (678)
+|++++..|..|..+++|++|+|++|.|++..+. + .+.+|+.|+|++|.+...
T Consensus 87 ~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 87 YNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 9999998888999999999999999999965554 2 568999999999998754
No 321
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.47 E-value=2.3e-14 Score=158.08 Aligned_cols=130 Identities=22% Similarity=0.193 Sum_probs=108.1
Q ss_pred cCCCCCEEEccCCcccccCC-cccccCCCCccEEEcccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCC
Q 044996 68 ELREMRTLSLMRNNLEGPMP-DLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRL 146 (678)
Q Consensus 68 ~l~~L~~L~Ls~N~l~g~~p-~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L 146 (678)
.+++|+.|+|++|.|++.+| .+..+ ++|++|+|++|+|+|.+|..++.++++|+.|+|++|.|++. |. +..+++|
T Consensus 118 ~l~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L 193 (487)
T 3oja_A 118 RGQGKKNIYLANNKITMLRDLDEGCR--SRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKL 193 (487)
T ss_dssp CCSSCEEEECCSSCCCSGGGBCGGGG--SSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTC
T ss_pred ccCCCCEEECCCCCCCCCCchhhcCC--CCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCC
Confidence 46889999999999998877 45555 77999999999999988877445899999999999999976 33 4569999
Q ss_pred CeEeccCCcccccCCcc-CCCCCcEEEeecCcccccCchhhhc---CCCCCCCCCCCCCC
Q 044996 147 VELRLEGNKFEGQIPDF-QQKDLVSFNVSNNALFGSISPALRE---LDPSSFSGNRDLCG 202 (678)
Q Consensus 147 ~~l~l~~N~l~g~~p~~-~~~~l~~l~l~~N~l~g~ip~~~~~---l~~~~~~gn~~lc~ 202 (678)
+.|+|++|.|++..|.+ .+.+|+.|+|++|.|++ +|..+.. +....+.+|+..|+
T Consensus 194 ~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 194 KTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp CEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHH
T ss_pred CEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCc
Confidence 99999999999876664 66899999999999997 7776654 44557889988775
No 322
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.47 E-value=5.6e-15 Score=170.65 Aligned_cols=139 Identities=23% Similarity=0.334 Sum_probs=117.4
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCC-cccccCCCCccEEEcccCccccccChhhhcCCcccc
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMP-DLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLR 123 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~ 123 (678)
..+..|+|++|.+. .||.. +..|++|+.|+|++|.|+ .|| .+..+ .+|++|+|++|+|+ .||.. |++|++|+
T Consensus 224 ~~L~~L~Ls~n~l~-~l~~~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l--~~L~~L~Ls~N~l~-~lp~~-~~~l~~L~ 296 (727)
T 4b8c_D 224 QLWHALDLSNLQIF-NISAN-IFKYDFLTRLYLNGNSLT-ELPAEIKNL--SNLRVLDLSHNRLT-SLPAE-LGSCFQLK 296 (727)
T ss_dssp CCCCEEECTTSCCS-CCCGG-GGGCCSCSCCBCTTSCCS-CCCGGGGGG--TTCCEEECTTSCCS-SCCSS-GGGGTTCS
T ss_pred CCCcEEECCCCCCC-CCChh-hcCCCCCCEEEeeCCcCc-ccChhhhCC--CCCCEEeCcCCcCC-ccChh-hcCCCCCC
Confidence 56889999999998 88875 568999999999999999 777 46667 78999999999999 89987 89999999
Q ss_pred eeeccccccccCCchhhcCCCCCCeEeccCCcccccCCccC--C-CCCcEEEeecCcccccCchhhhcCCC
Q 044996 124 KLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQ--Q-KDLVSFNVSNNALFGSISPALRELDP 191 (678)
Q Consensus 124 ~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~--~-~~l~~l~l~~N~l~g~ip~~~~~l~~ 191 (678)
+|+|++|.|+ .||..|++|++|++|+|++|.|+|.+|... . ..+..|+|++|.++|.+|..+..++.
T Consensus 297 ~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~~l~l 366 (727)
T 4b8c_D 297 YFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERRFIEI 366 (727)
T ss_dssp EEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC------
T ss_pred EEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccccceeEe
Confidence 9999999997 899999999999999999999999998742 1 22335789999999999998876653
No 323
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.47 E-value=1.2e-13 Score=156.88 Aligned_cols=143 Identities=18% Similarity=0.152 Sum_probs=124.2
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcccCccccccChhhhcCCcccc
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLR 123 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~ 123 (678)
..++.|+|++|.+.+-. +..+..+++|+.|+|++|++.+..|. +..+ .+|++|+|++|++++..|.. |+++++|+
T Consensus 33 ~~l~~L~Ls~n~i~~~~-~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l--~~L~~L~Ls~n~l~~~~~~~-~~~l~~L~ 108 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQ-NTTFSRLINLTFLDLTRCQIYWIHEDTFQSQ--HRLDTLVLTANPLIFMAETA-LSGPKALK 108 (606)
T ss_dssp TTCCEEECTTCCCSEEC-TTTSTTCTTCSEEECTTCCCCEECTTTTTTC--TTCCEEECTTCCCSEECTTT-TSSCTTCC
T ss_pred CcCcEEEccCCccCcCC-hhHhccCccceEEECCCCccceeChhhccCc--cccCeeeCCCCcccccChhh-hccccccc
Confidence 36899999999999544 45699999999999999999998874 5556 78999999999999777755 99999999
Q ss_pred eeeccccccccCCchhhcCCCCCCeEeccCCcccc-cCCcc-CCCCCcEEEeecCcccccCchhhhcCCC
Q 044996 124 KLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEG-QIPDF-QQKDLVSFNVSNNALFGSISPALRELDP 191 (678)
Q Consensus 124 ~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g-~~p~~-~~~~l~~l~l~~N~l~g~ip~~~~~l~~ 191 (678)
+|+|++|++++..|..++++++|++|+|++|.+++ .+|.+ .+++|+.|++++|.+++..|..+..+..
T Consensus 109 ~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 178 (606)
T 3t6q_A 109 HLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQ 178 (606)
T ss_dssp EEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTT
T ss_pred EeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcc
Confidence 99999999998778889999999999999999998 44654 5789999999999999888877766553
No 324
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.47 E-value=1.3e-13 Score=137.12 Aligned_cols=134 Identities=17% Similarity=0.215 Sum_probs=112.2
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCc-ccccCC-cccccCCCCccEEEccc-CccccccChhhhcCCcc
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNN-LEGPMP-DLRQLGNGALRSVYLSN-NRFSGEIPTDAFDGMTS 121 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~-l~g~~p-~~~~~~~~~L~~L~Ls~-N~l~G~ip~~~~~~l~~ 121 (678)
..+..|+|++|.+. .+++..+..+++|+.|+|++|+ +++..+ .+..+ ++|++|+|++ |+++ .+|+..|.++++
T Consensus 31 ~~l~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l--~~L~~L~l~~~n~l~-~i~~~~f~~l~~ 106 (239)
T 2xwt_C 31 PSTQTLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNL--SKVTHIEIRNTRNLT-YIDPDALKELPL 106 (239)
T ss_dssp TTCCEEEEESCCCS-EECTTTTTTCTTCCEEEEECCSSCCEECTTTEESC--TTCCEEEEEEETTCC-EECTTSEECCTT
T ss_pred CcccEEEEeCCcce-EECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCC--cCCcEEECCCCCCee-EcCHHHhCCCCC
Confidence 46899999999998 4565678999999999999997 776555 35555 7899999998 9999 566666999999
Q ss_pred cceeeccccccccCCchhhcCCCCCC---eEeccCC-cccccCCc-c-CCCCCc-EEEeecCcccccCchh
Q 044996 122 LRKLLLADNQFNGPIPESLTRLSRLV---ELRLEGN-KFEGQIPD-F-QQKDLV-SFNVSNNALFGSISPA 185 (678)
Q Consensus 122 L~~l~l~~N~~~g~~p~~~~~l~~L~---~l~l~~N-~l~g~~p~-~-~~~~l~-~l~l~~N~l~g~ip~~ 185 (678)
|++|+|++|++++ +|. +..+++|+ +|+|++| .+++..+. + .+.+|+ .|++++|.++ .+|..
T Consensus 107 L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~ 174 (239)
T 2xwt_C 107 LKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGY 174 (239)
T ss_dssp CCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTT
T ss_pred CCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHh
Confidence 9999999999997 777 88999998 9999999 88865554 2 567899 9999999998 67654
No 325
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.46 E-value=1.3e-13 Score=155.18 Aligned_cols=152 Identities=22% Similarity=0.232 Sum_probs=99.3
Q ss_pred cEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCC--cccccCCCCccEEEcccCccccccChhhhcCCcccc
Q 044996 46 KIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMP--DLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLR 123 (678)
Q Consensus 46 ~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p--~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~ 123 (678)
++..|+|++|.+.+. ++. +..+++|+.|+|++|.+.+.+| .+..+ ++|++|+|++|.+++.+|.. |.++++|+
T Consensus 374 ~L~~L~l~~n~l~~~-~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l--~~L~~L~l~~n~l~~~~~~~-~~~l~~L~ 448 (570)
T 2z63_A 374 SLKYLDLSFNGVITM-SSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSL--RNLIYLDISHTHTRVAFNGI-FNGLSSLE 448 (570)
T ss_dssp CCCEEECCSCSEEEE-EEE-EETCTTCCEEECTTSEEESCTTSCTTTTC--TTCCEEECTTSCCEECCTTT-TTTCTTCC
T ss_pred ccCEEECCCCccccc-ccc-ccccCCCCEEEccCCccccccchhhhhcC--CCCCEEeCcCCcccccchhh-hhcCCcCc
Confidence 344455555544432 222 5556666666666666666554 23333 56777777777777666644 77777788
Q ss_pred eeeccccccc-cCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccccCchhhhc---CCCCCCCCC
Q 044996 124 KLLLADNQFN-GPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGSISPALRE---LDPSSFSGN 197 (678)
Q Consensus 124 ~l~l~~N~~~-g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ip~~~~~---l~~~~~~gn 197 (678)
.|+|++|.++ +.+|..+..+++|++|+|++|.+++..|.. .+++|+.|++++|++++..|..+.. +....+.+|
T Consensus 449 ~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 528 (570)
T 2z63_A 449 VLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTN 528 (570)
T ss_dssp EEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred EEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCC
Confidence 8888887776 567777777788888888888877776653 4567888888888887766655543 344467777
Q ss_pred CCCCC
Q 044996 198 RDLCG 202 (678)
Q Consensus 198 ~~lc~ 202 (678)
+..|.
T Consensus 529 ~~~~~ 533 (570)
T 2z63_A 529 PWDCS 533 (570)
T ss_dssp CBCCC
T ss_pred cccCC
Confidence 77664
No 326
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.45 E-value=3.1e-14 Score=147.78 Aligned_cols=153 Identities=18% Similarity=0.178 Sum_probs=119.5
Q ss_pred CcEEEEEeCCCCceeecChHHh-hcCCCCCEEEccCCcccccCCccccc---CCCCccEEEcccCccccccChhhhcCCc
Q 044996 45 GKIWGLKLEDMGLQGNIDITIL-KELREMRTLSLMRNNLEGPMPDLRQL---GNGALRSVYLSNNRFSGEIPTDAFDGMT 120 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l-~~l~~L~~L~Ls~N~l~g~~p~~~~~---~~~~L~~L~Ls~N~l~G~ip~~~~~~l~ 120 (678)
.++..|+|++|.+.|.+|...+ ..+++|+.|+|++|++++..+.+..+ ..++|++|+|++|++++..|. .|++++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~-~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCE-QVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTT-TCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHH-HhccCC
Confidence 4789999999999999987543 88999999999999999983223322 125799999999999965554 489999
Q ss_pred ccceeeccccccccC--Cchhh--cCCCCCCeEeccCCcccc--cCCcc---CCCCCcEEEeecCcccccCch-hh---h
Q 044996 121 SLRKLLLADNQFNGP--IPESL--TRLSRLVELRLEGNKFEG--QIPDF---QQKDLVSFNVSNNALFGSISP-AL---R 187 (678)
Q Consensus 121 ~L~~l~l~~N~~~g~--~p~~~--~~l~~L~~l~l~~N~l~g--~~p~~---~~~~l~~l~l~~N~l~g~ip~-~~---~ 187 (678)
+|++|+|++|++.|. +|..+ +++++|++|+|++|.|++ .++.. .+++|+.|+|++|++++.+|. .+ .
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~ 253 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPS 253 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCT
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcC
Confidence 999999999999886 45566 899999999999999984 33332 568999999999999997752 22 3
Q ss_pred cCCCCCCCCCC
Q 044996 188 ELDPSSFSGNR 198 (678)
Q Consensus 188 ~l~~~~~~gn~ 198 (678)
++....+.+|.
T Consensus 254 ~L~~L~Ls~N~ 264 (312)
T 1wwl_A 254 QLNSLNLSFTG 264 (312)
T ss_dssp TCCEEECTTSC
T ss_pred CCCEEECCCCc
Confidence 44445566663
No 327
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.45 E-value=2e-13 Score=131.54 Aligned_cols=129 Identities=16% Similarity=0.178 Sum_probs=106.3
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCC-cccccCCCCccEEEcccCccccccChhhhcCCcccc
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMP-DLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLR 123 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~ 123 (678)
.++..|+|++|.+. .++ .+..+++|+.|+|++|++++..| .+..+ ++|++|+|++|++++.+|.. +..+++|+
T Consensus 66 ~~L~~L~l~~n~~~-~~~--~l~~l~~L~~L~l~~n~l~~~~~~~l~~l--~~L~~L~Ls~n~i~~~~~~~-l~~l~~L~ 139 (197)
T 4ezg_A 66 HNIKDLTINNIHAT-NYN--PISGLSNLERLRIMGKDVTSDKIPNLSGL--TSLTLLDISHSAHDDSILTK-INTLPKVN 139 (197)
T ss_dssp TTCSEEEEESCCCS-CCG--GGTTCTTCCEEEEECTTCBGGGSCCCTTC--TTCCEEECCSSBCBGGGHHH-HTTCSSCC
T ss_pred CCCCEEEccCCCCC-cch--hhhcCCCCCEEEeECCccCcccChhhcCC--CCCCEEEecCCccCcHhHHH-HhhCCCCC
Confidence 46889999999664 232 58899999999999999998544 56666 78999999999999878865 89999999
Q ss_pred eeeccccccccCCchhhcCCCCCCeEeccCCcccccCCccCCCCCcEEEeecCcccc
Q 044996 124 KLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQQKDLVSFNVSNNALFG 180 (678)
Q Consensus 124 ~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~l~~l~l~~N~l~g 180 (678)
+|+|++|.+-+.+| .+..+++|+.|+|++|.+++..+-..+++|+.|++++|++.+
T Consensus 140 ~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 140 SIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp EEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCCTTGGGCSSCCEEEECBC----
T ss_pred EEEccCCCCccccH-hhcCCCCCCEEECCCCCCcChHHhccCCCCCEEEeeCcccCC
Confidence 99999999555777 699999999999999999974433477899999999999865
No 328
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.43 E-value=3.2e-13 Score=155.58 Aligned_cols=138 Identities=24% Similarity=0.249 Sum_probs=106.4
Q ss_pred HhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcccCccccc----c---ChhhhcCCcccceeeccccccccCC
Q 044996 65 ILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSNNRFSGE----I---PTDAFDGMTSLRKLLLADNQFNGPI 136 (678)
Q Consensus 65 ~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~----i---p~~~~~~l~~L~~l~l~~N~~~g~~ 136 (678)
.+..+++|+.|+|++|++++..|. +..+ .+|++|+|++|++++. + |...|.++++|+.|+|++|+++...
T Consensus 475 ~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~ 552 (680)
T 1ziw_A 475 PFQPLRNLTILDLSNNNIANINDDMLEGL--EKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIP 552 (680)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTC--TTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCC
T ss_pred ccccCCCCCEEECCCCCCCcCChhhhccc--cccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCC
Confidence 467788888888888888876664 4444 6789999999988853 1 2123788899999999999998433
Q ss_pred chhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccccCchh----hhcCCCCCCCCCCCCCCCC
Q 044996 137 PESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGSISPA----LRELDPSSFSGNRDLCGEP 204 (678)
Q Consensus 137 p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ip~~----~~~l~~~~~~gn~~lc~~~ 204 (678)
+..|.++++|+.|+|++|++++..+.. .+.+|+.|+|++|+|++..|.. +.++....+.+|++.|.+.
T Consensus 553 ~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 553 VEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred HHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 346899999999999999999544442 5689999999999999877764 4567777899999999654
No 329
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.42 E-value=7.7e-13 Score=138.23 Aligned_cols=138 Identities=20% Similarity=0.309 Sum_probs=90.2
Q ss_pred CCcceEEecC-----------CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEc
Q 044996 35 ANWNGVLCHR-----------GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYL 102 (678)
Q Consensus 35 ~~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~L 102 (678)
|.|..+.|+. ..++.|+|++|.+.+ +++..+..+++|+.|+|++|++++..|. +..+ ++|++|+|
T Consensus 31 c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~L 107 (330)
T 1xku_A 31 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITE-IKDGDFKNLKNLHTLILINNKISKISPGAFAPL--VKLERLYL 107 (330)
T ss_dssp EETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCC-BCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTC--TTCCEEEC
T ss_pred CCCeEEEecCCCccccCccCCCCCeEEECCCCcCCE-eChhhhccCCCCCEEECCCCcCCeeCHHHhcCC--CCCCEEEC
Confidence 5799999962 257889999999985 5555689999999999999999988773 4444 56778888
Q ss_pred ccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccc--cCCcc--CCCCCcEEEeecCcc
Q 044996 103 SNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEG--QIPDF--QQKDLVSFNVSNNAL 178 (678)
Q Consensus 103 s~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g--~~p~~--~~~~l~~l~l~~N~l 178 (678)
++|+++ .+|..++ ++|+.|+|++|.+++..+..+.++++|++|+|++|.+.. ..+.. .+++|+.|++++|.+
T Consensus 108 s~n~l~-~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l 183 (330)
T 1xku_A 108 SKNQLK-ELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI 183 (330)
T ss_dssp CSSCCS-BCCSSCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC
T ss_pred CCCcCC-ccChhhc---ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcc
Confidence 777777 5665422 456666666666655555555555555555555555532 22221 234444444444444
Q ss_pred c
Q 044996 179 F 179 (678)
Q Consensus 179 ~ 179 (678)
+
T Consensus 184 ~ 184 (330)
T 1xku_A 184 T 184 (330)
T ss_dssp C
T ss_pred c
Confidence 3
No 330
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.42 E-value=4e-13 Score=128.98 Aligned_cols=120 Identities=23% Similarity=0.303 Sum_probs=104.0
Q ss_pred CCcceEEecC-----------CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEc
Q 044996 35 ANWNGVLCHR-----------GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYL 102 (678)
Q Consensus 35 ~~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~L 102 (678)
|.|..|.|+. ..++.|+|++|.+. .+| ..+..+++|+.|+|++|++++..+. +..+ ++|+.|+|
T Consensus 10 C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip-~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l--~~L~~L~L 85 (193)
T 2wfh_A 10 CLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVP-KELSNYKHLTLIDLSNNRISTLSNQSFSNM--TQLLTLIL 85 (193)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCC-GGGGGCTTCCEEECCSSCCCCCCTTTTTTC--TTCCEEEC
T ss_pred eCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhH-HHhhcccCCCEEECCCCcCCEeCHhHccCC--CCCCEEEC
Confidence 5788899963 25889999999998 788 4699999999999999999987764 5555 78999999
Q ss_pred ccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCccccc
Q 044996 103 SNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQ 159 (678)
Q Consensus 103 s~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~ 159 (678)
++|+|++ +|+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|.|...
T Consensus 86 s~N~l~~-i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 86 SYNRLRC-IPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CSSCCCB-CCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCccCE-eCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 9999995 5555699999999999999999977777799999999999999999753
No 331
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.42 E-value=1.2e-13 Score=137.46 Aligned_cols=147 Identities=18% Similarity=0.183 Sum_probs=117.2
Q ss_pred CcEEEEEeCCCC-ceeecChHHhhcCCCCCEEEccC-CcccccCCc-ccccCCCCccEEEcccCccccccChhhhcCCcc
Q 044996 45 GKIWGLKLEDMG-LQGNIDITILKELREMRTLSLMR-NNLEGPMPD-LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTS 121 (678)
Q Consensus 45 ~~v~~l~l~~~~-l~g~~~~~~l~~l~~L~~L~Ls~-N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~ 121 (678)
.++..|+|++|. +. .+++..+..+++|+.|+|++ |++++..+. +..+ ++|++|+|++|++++ +|. |..+++
T Consensus 55 ~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l--~~L~~L~l~~n~l~~-lp~--~~~l~~ 128 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQ-QLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKEL--PLLKFLGIFNTGLKM-FPD--LTKVYS 128 (239)
T ss_dssp TTCCEEEEECCSSCC-EECTTTEESCTTCCEEEEEEETTCCEECTTSEECC--TTCCEEEEEEECCCS-CCC--CTTCCB
T ss_pred CCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCC--CCCCEEeCCCCCCcc-ccc--cccccc
Confidence 468999999997 65 67766789999999999998 999976653 4455 779999999999996 885 788888
Q ss_pred cc---eeecccc-ccccCCchhhcCCCCCC-eEeccCCcccccCCcc--CCCCCcEEEeecCc-ccccCchhhhc----C
Q 044996 122 LR---KLLLADN-QFNGPIPESLTRLSRLV-ELRLEGNKFEGQIPDF--QQKDLVSFNVSNNA-LFGSISPALRE----L 189 (678)
Q Consensus 122 L~---~l~l~~N-~~~g~~p~~~~~l~~L~-~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~-l~g~ip~~~~~----l 189 (678)
|+ +|+|++| ++++..+..|.++++|+ .|+|++|.++ .+|.. ...+|+.|+|++|. +++..+..+.. +
T Consensus 129 L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L 207 (239)
T 2xwt_C 129 TDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGP 207 (239)
T ss_dssp CCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCC
T ss_pred cccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCC
Confidence 88 9999999 99987777899999999 9999999998 77753 44689999999995 87544444443 3
Q ss_pred CCCCCCCCC
Q 044996 190 DPSSFSGNR 198 (678)
Q Consensus 190 ~~~~~~gn~ 198 (678)
....+.+|.
T Consensus 208 ~~L~l~~N~ 216 (239)
T 2xwt_C 208 SLLDVSQTS 216 (239)
T ss_dssp SEEECTTCC
T ss_pred cEEECCCCc
Confidence 334455553
No 332
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.42 E-value=3.6e-13 Score=152.58 Aligned_cols=137 Identities=20% Similarity=0.229 Sum_probs=116.6
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcccCccccccChhhhcCCcccc
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLR 123 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~ 123 (678)
.++..|+|++|.+.+..+ ..+..+++|+.|+|++|.+++.+|. +..+ ++|++|+|++|.|+ .+|+.+|+++++|+
T Consensus 75 ~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~L~~n~l~-~l~~~~~~~l~~L~ 150 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDT-YAFAYAHTIQKLYMGFNAIRYLPPHVFQNV--PLLTVLVLERNDLS-SLPRGIFHNTPKLT 150 (597)
T ss_dssp CCCSEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCCCCCTTTTTTC--TTCCEEECCSSCCC-CCCTTTTTTCTTCC
T ss_pred CCCcEEECCCCCCCCCCh-HHhcCCCCCCEEECCCCcCCCCCHHHHcCC--CCCCEEEeeCCCCC-CCCHHHhccCCCCC
Confidence 468899999999996544 4689999999999999999998775 4556 78999999999999 67777789999999
Q ss_pred eeeccccccccCCchhhcCCCCCCeEeccCCcccccCCccCCCCCcEEEeecCcccc-cCchhh
Q 044996 124 KLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQQKDLVSFNVSNNALFG-SISPAL 186 (678)
Q Consensus 124 ~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~l~~l~l~~N~l~g-~ip~~~ 186 (678)
+|+|++|.+++..|..|+++++|++|+|++|.|++. +.....+|+.|++++|.+++ .+|..+
T Consensus 151 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~l~~L~~L~l~~n~l~~l~~~~~L 213 (597)
T 3oja_B 151 TLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-DLSLIPSLFHANVSYNLLSTLAIPIAV 213 (597)
T ss_dssp EEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC-CGGGCTTCSEEECCSSCCSEEECCTTC
T ss_pred EEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc-ChhhhhhhhhhhcccCccccccCCchh
Confidence 999999999999999999999999999999999864 55566778888888888776 334333
No 333
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.42 E-value=2.8e-13 Score=152.49 Aligned_cols=137 Identities=18% Similarity=0.247 Sum_probs=122.8
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcccCccc-cccChhhhcCCccc
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSNNRFS-GEIPTDAFDGMTSL 122 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~-G~ip~~~~~~l~~L 122 (678)
.++..|+|++|.+.+..+...+..+++|+.|+|++|.+.+.+|. +..+ ++|+.|+|++|.++ |.+|.. |..+++|
T Consensus 396 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~l~~n~l~~~~~p~~-~~~l~~L 472 (570)
T 2z63_A 396 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL--SSLEVLKMAGNSFQENFLPDI-FTELRNL 472 (570)
T ss_dssp TTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTC--TTCCEEECTTCEEGGGEECSC-CTTCTTC
T ss_pred CCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcC--CcCcEEECcCCcCccccchhh-hhcccCC
Confidence 46889999999999877656689999999999999999998884 4445 78999999999998 689965 8999999
Q ss_pred ceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccccCch
Q 044996 123 RKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGSISP 184 (678)
Q Consensus 123 ~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ip~ 184 (678)
+.|+|++|++++..|..+.++++|++|+|++|.+++.+|.. .+++|+.|++++|.+++.+|.
T Consensus 473 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 473 TFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 99999999999999999999999999999999999877753 678999999999999999884
No 334
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.42 E-value=2.1e-13 Score=141.76 Aligned_cols=132 Identities=22% Similarity=0.181 Sum_probs=79.9
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCC--ccccc-------------CCCCccEEEcccCcccc
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMP--DLRQL-------------GNGALRSVYLSNNRFSG 109 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p--~~~~~-------------~~~~L~~L~Ls~N~l~G 109 (678)
.++..|+|++|.+.+..+ +..+++|+.|+|++|++++..+ .+..+ ..++|+.|+|++|++++
T Consensus 58 ~~L~~L~Ls~n~l~~~~~---~~~l~~L~~L~Ls~n~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~N~l~~ 134 (317)
T 3o53_A 58 TKLELLNLSSNVLYETLD---LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITM 134 (317)
T ss_dssp TTCCEEECTTSCCEEEEE---ETTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCSEEEECCCSSCEEEECCSSCCCS
T ss_pred CcCCEEECCCCcCCcchh---hhhcCCCCEEECcCCccccccCCCCcCEEECCCCccCCcCccccCCCCEEECCCCCCCC
Confidence 456666666666665443 5666666666666666665321 00000 01345666666666664
Q ss_pred ccChhhhcCCcccceeeccccccccCCchhhc-CCCCCCeEeccCCcccccCCccCCCCCcEEEeecCcccc
Q 044996 110 EIPTDAFDGMTSLRKLLLADNQFNGPIPESLT-RLSRLVELRLEGNKFEGQIPDFQQKDLVSFNVSNNALFG 180 (678)
Q Consensus 110 ~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~-~l~~L~~l~l~~N~l~g~~p~~~~~~l~~l~l~~N~l~g 180 (678)
..| ..|..+++|++|+|++|.+++..|..+. .+++|++|+|++|.+++..+.....+|+.|+|++|.+++
T Consensus 135 ~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~l~~L~~L~Ls~N~l~~ 205 (317)
T 3o53_A 135 LRD-LDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAF 205 (317)
T ss_dssp GGG-BCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCE
T ss_pred ccc-hhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccccccccccCCEEECCCCcCCc
Confidence 333 3366677777777777777766666653 567777777777777655333456677777777777765
No 335
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.40 E-value=4.5e-14 Score=146.37 Aligned_cols=138 Identities=17% Similarity=0.175 Sum_probs=71.6
Q ss_pred EEEEEeCCCCceeecChHHh-hcCCCCCEEEccCCcccccCCcccc---cCCCCccEEEcccCccccccChhhhcCCccc
Q 044996 47 IWGLKLEDMGLQGNIDITIL-KELREMRTLSLMRNNLEGPMPDLRQ---LGNGALRSVYLSNNRFSGEIPTDAFDGMTSL 122 (678)
Q Consensus 47 v~~l~l~~~~l~g~~~~~~l-~~l~~L~~L~Ls~N~l~g~~p~~~~---~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L 122 (678)
+..|+|++|.+.|.+|...+ ..+++|+.|+|++|.+.+..|.+.. ...++|++|+|++|++++..| ..|.++++|
T Consensus 93 L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~-~~~~~l~~L 171 (310)
T 4glp_A 93 LKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSC-EQVRAFPAL 171 (310)
T ss_dssp CCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCT-TSCCCCTTC
T ss_pred eeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhH-HHhccCCCC
Confidence 55566666666655554322 5566666666666666654442110 011456666666666654333 235566666
Q ss_pred ceeeccccccccC--Cc--hhhcCCCCCCeEeccCCcccccCCc------cCCCCCcEEEeecCcccccCchhh
Q 044996 123 RKLLLADNQFNGP--IP--ESLTRLSRLVELRLEGNKFEGQIPD------FQQKDLVSFNVSNNALFGSISPAL 186 (678)
Q Consensus 123 ~~l~l~~N~~~g~--~p--~~~~~l~~L~~l~l~~N~l~g~~p~------~~~~~l~~l~l~~N~l~g~ip~~~ 186 (678)
++|+|++|++.+. ++ ..++.+++|++|+|++|.++. +|. ....+|+.|+|++|.|++.+|..+
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~ 244 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSA 244 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhH
Confidence 6666666665442 21 112455566666666666542 111 133556666666666666555443
No 336
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.40 E-value=3.6e-13 Score=148.25 Aligned_cols=157 Identities=24% Similarity=0.229 Sum_probs=120.2
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-cccc----------------------CCCCccEEE
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQL----------------------GNGALRSVY 101 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~----------------------~~~~L~~L~ 101 (678)
.++..|+|++|.+. .++...+..+++|+.|+|++|.+.+..+. +..+ ...+|+.|+
T Consensus 152 ~~L~~L~l~~n~l~-~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~ 230 (477)
T 2id5_A 152 NSLEQLTLEKCNLT-SIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLS 230 (477)
T ss_dssp TTCCEEEEESCCCS-SCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEE
T ss_pred CCCCEEECCCCcCc-ccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEE
Confidence 35778888888877 45666677788888888888777765441 2111 012577788
Q ss_pred cccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCccc
Q 044996 102 LSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALF 179 (678)
Q Consensus 102 Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~ 179 (678)
|++|+|+ .+|...|..+++|+.|+|++|.+++..+..|..+++|+.|+|++|.+++..|.. .+.+|+.|+|++|+|+
T Consensus 231 l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 309 (477)
T 2id5_A 231 ITHCNLT-AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLT 309 (477)
T ss_dssp EESSCCC-SCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCS
T ss_pred CcCCccc-ccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCc
Confidence 8888887 577666889999999999999999888888999999999999999999877764 5689999999999998
Q ss_pred ccCchhh---hcCCCCCCCCCCCCCCC
Q 044996 180 GSISPAL---RELDPSSFSGNRDLCGE 203 (678)
Q Consensus 180 g~ip~~~---~~l~~~~~~gn~~lc~~ 203 (678)
+..+..+ .+|....+.+|++.|.+
T Consensus 310 ~~~~~~~~~l~~L~~L~l~~N~l~c~c 336 (477)
T 2id5_A 310 TLEESVFHSVGNLETLILDSNPLACDC 336 (477)
T ss_dssp CCCGGGBSCGGGCCEEECCSSCEECSG
T ss_pred eeCHhHcCCCcccCEEEccCCCccCcc
Confidence 7555444 45666778999988853
No 337
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.40 E-value=3.9e-13 Score=149.71 Aligned_cols=138 Identities=18% Similarity=0.172 Sum_probs=116.3
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCC-cccccCCCCccEEEcccCccccccChhhhcCCcccc
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMP-DLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLR 123 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~ 123 (678)
.+++.|+|++|.+.+ +++..+..+++|+.|+|++|++++..| .+..+ ++|++|+|++|+|+ .||.. .+++|+
T Consensus 21 ~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l--~~L~~L~Ls~N~l~-~lp~~---~l~~L~ 93 (520)
T 2z7x_B 21 QKTTILNISQNYISE-LWTSDILSLSKLRILIISHNRIQYLDISVFKFN--QELEYLDLSHNKLV-KISCH---PTVNLK 93 (520)
T ss_dssp TTCSEEECCSSCCCC-CCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTC--TTCCEEECCSSCCC-EEECC---CCCCCS
T ss_pred ccccEEECCCCcccc-cChhhccccccccEEecCCCccCCcChHHhhcc--cCCCEEecCCCcee-ecCcc---ccCCcc
Confidence 578999999999985 555678999999999999999998877 45555 77999999999999 78864 799999
Q ss_pred eeecccccccc-CCchhhcCCCCCCeEeccCCcccccCCccCCCCC--cEEEeecCcc--cccCchhhhcCC
Q 044996 124 KLLLADNQFNG-PIPESLTRLSRLVELRLEGNKFEGQIPDFQQKDL--VSFNVSNNAL--FGSISPALRELD 190 (678)
Q Consensus 124 ~l~l~~N~~~g-~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~l--~~l~l~~N~l--~g~ip~~~~~l~ 190 (678)
+|+|++|++++ .+|..|+++++|++|+|++|.+++. .-..+++| +.|++++|.+ ++.+|..+..+.
T Consensus 94 ~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~ 164 (520)
T 2z7x_B 94 HLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKS-SVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFN 164 (520)
T ss_dssp EEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGG-GGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCC
T ss_pred EEeccCCccccccchhhhccCCcceEEEecCcccchh-hccccccceeeEEEeecccccccccccccccccc
Confidence 99999999998 6899999999999999999999873 22345666 9999999999 888888777654
No 338
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.40 E-value=3.1e-13 Score=142.72 Aligned_cols=130 Identities=18% Similarity=0.213 Sum_probs=60.2
Q ss_pred EEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCC--cccccCCCCccEEEcccCccccccChhhhcCCcccce
Q 044996 47 IWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMP--DLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRK 124 (678)
Q Consensus 47 v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p--~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~ 124 (678)
+..|+|++|.+. .+++..+..+++|++|+|++|++.+..+ .+..+ ++|++|+|++|+..+.+++..|.++++|+.
T Consensus 102 L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l--~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~ 178 (353)
T 2z80_A 102 LEHLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHL--TKLQILRVGNMDTFTKIQRKDFAGLTFLEE 178 (353)
T ss_dssp CCEEECCSSCCS-SCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTC--TTCCEEEEEESSSCCEECTTTTTTCCEEEE
T ss_pred CCEEECCCCcCC-cCCHhHhCCCccCCEEECCCCCCcccCchhhhccC--CCCcEEECCCCccccccCHHHccCCCCCCE
Confidence 334444444443 2333334445555555555555443222 12222 445555555553222333333555556666
Q ss_pred eeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc---CCCCCcEEEeecCcccc
Q 044996 125 LLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF---QQKDLVSFNVSNNALFG 180 (678)
Q Consensus 125 l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~---~~~~l~~l~l~~N~l~g 180 (678)
|+|++|++++..|..+.++++|++|+|++|.++ .+|.. ..++|+.|++++|.+++
T Consensus 179 L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~ 236 (353)
T 2z80_A 179 LEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDT 236 (353)
T ss_dssp EEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTT
T ss_pred EECCCCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCcccc
Confidence 666666665555555555555555555444442 11110 13445555555555544
No 339
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.40 E-value=7.5e-13 Score=141.76 Aligned_cols=137 Identities=21% Similarity=0.264 Sum_probs=118.2
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcccCccccccChhhhcCCcccc
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLR 123 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~ 123 (678)
.++..|+|+++.+.+ +++..+..+++|+.|+|++|.+.+..|. +..+ ++|++|+|++|+++ .+|..+|.++++|+
T Consensus 69 ~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~L~~n~l~-~l~~~~~~~l~~L~ 144 (390)
T 3o6n_A 69 RQVELLNLNDLQIEE-IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNV--PLLTVLVLERNDLS-SLPRGIFHNTPKLT 144 (390)
T ss_dssp CCCSEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC--TTCCEEECCSSCCC-CCCTTTTTTCTTCC
T ss_pred ccCcEEECCCCcccc-cChhhccCCCCcCEEECCCCCCCcCCHHHhcCC--CCCCEEECCCCccC-cCCHHHhcCCCCCc
Confidence 468899999999984 5555689999999999999999998775 4555 78999999999999 78888789999999
Q ss_pred eeeccccccccCCchhhcCCCCCCeEeccCCcccccCCccCCCCCcEEEeecCcccc-cCchhh
Q 044996 124 KLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQQKDLVSFNVSNNALFG-SISPAL 186 (678)
Q Consensus 124 ~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~l~~l~l~~N~l~g-~ip~~~ 186 (678)
+|+|++|.+++..|..+..+++|++|+|++|.+++. +.....+|+.|++++|.+++ ..|..+
T Consensus 145 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~L 207 (390)
T 3o6n_A 145 TLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-DLSLIPSLFHANVSYNLLSTLAIPIAV 207 (390)
T ss_dssp EEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC-CGGGCTTCSEEECCSSCCSEEECCSSC
T ss_pred EEECCCCccCccChhhccCCCCCCEEECCCCcCCcc-ccccccccceeecccccccccCCCCcc
Confidence 999999999998899999999999999999999864 55567889999999999876 344433
No 340
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.39 E-value=9.1e-13 Score=139.60 Aligned_cols=136 Identities=24% Similarity=0.221 Sum_probs=112.4
Q ss_pred eEEecCCcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCccc--ccCCCCccEEEcccCccccccChhhh
Q 044996 39 GVLCHRGKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLR--QLGNGALRSVYLSNNRFSGEIPTDAF 116 (678)
Q Consensus 39 gv~C~~~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~--~~~~~~L~~L~Ls~N~l~G~ip~~~~ 116 (678)
.=.|.. ..+++++++|. .+|... ...|+.|+|++|+|++..+... .+ .+|+.|+|++|+|++ +|+..|
T Consensus 15 ~C~C~~---~~l~c~~~~l~-~iP~~~---~~~l~~L~Ls~N~l~~l~~~~~~~~l--~~L~~L~L~~N~i~~-i~~~~~ 84 (361)
T 2xot_A 15 NCLCAS---NILSCSKQQLP-NVPQSL---PSYTALLDLSHNNLSRLRAEWTPTRL--TNLHSLLLSHNHLNF-ISSEAF 84 (361)
T ss_dssp TCEEET---TEEECCSSCCS-SCCSSC---CTTCSEEECCSSCCCEECTTSSSSCC--TTCCEEECCSSCCCE-ECTTTT
T ss_pred CCEECC---CEEEeCCCCcC-ccCccC---CCCCCEEECCCCCCCccChhhhhhcc--cccCEEECCCCcCCc-cChhhc
Confidence 445643 25899999988 577532 3568999999999999877533 45 789999999999995 555569
Q ss_pred cCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccccCchh
Q 044996 117 DGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGSISPA 185 (678)
Q Consensus 117 ~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ip~~ 185 (678)
.++++|++|+|++|+|++..+..|..+++|++|+|++|.|++..|.. .+.+|+.|+|++|+|++ +|..
T Consensus 85 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-l~~~ 154 (361)
T 2xot_A 85 VPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR-FPVE 154 (361)
T ss_dssp TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS-CCGG
T ss_pred cCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe-eCHH
Confidence 99999999999999999888888999999999999999999877753 67899999999999987 4543
No 341
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.39 E-value=6.5e-13 Score=144.67 Aligned_cols=131 Identities=25% Similarity=0.329 Sum_probs=109.7
Q ss_pred cEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCccccee
Q 044996 46 KIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKL 125 (678)
Q Consensus 46 ~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l 125 (678)
++..|+|++++..+.++...+..|++|+.|+|++|+++ .+|.+..+ .+|+.|+|++|+|++..|. .|.++++|+.|
T Consensus 161 ~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~l--~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L 236 (440)
T 3zyj_A 161 SLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPNLTPL--IKLDELDLSGNHLSAIRPG-SFQGLMHLQKL 236 (440)
T ss_dssp TCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCCCTTC--SSCCEEECTTSCCCEECTT-TTTTCTTCCEE
T ss_pred ccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cccccCCC--cccCEEECCCCccCccChh-hhccCccCCEE
Confidence 45566666655555666667888999999999999988 46766666 7899999999999976665 59999999999
Q ss_pred eccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccc
Q 044996 126 LLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFG 180 (678)
Q Consensus 126 ~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g 180 (678)
+|++|++++..|..|.++++|+.|+|++|+|++..+.. .+.+|+.|+|++|.+.-
T Consensus 237 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 237 WMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp ECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred ECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 99999999999999999999999999999999655543 56899999999999863
No 342
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.39 E-value=5.1e-13 Score=149.64 Aligned_cols=106 Identities=26% Similarity=0.373 Sum_probs=89.2
Q ss_pred CCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEe
Q 044996 71 EMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELR 150 (678)
Q Consensus 71 ~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~ 150 (678)
.|+.|+|++|+|++ +|.+..+ ++|+.|+|++|+|+ .||.. |+++++|+.|+|++|+|++ +| .++++++|+.|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~~~~l--~~L~~L~Ls~N~l~-~lp~~-~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~ 514 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCHLEQL--LLVTHLDLSHNRLR-ALPPA-LAALRCLEVLQASDNALEN-VD-GVANLPRLQELL 514 (567)
T ss_dssp TCSEEECTTSCCSS-CCCGGGG--TTCCEEECCSSCCC-CCCGG-GGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEE
T ss_pred CceEEEecCCCCCC-CcCcccc--ccCcEeecCccccc-ccchh-hhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEE
Confidence 58889999999987 6767766 67999999999998 88875 8889999999999999987 77 788999999999
Q ss_pred ccCCcccccC-Ccc--CCCCCcEEEeecCcccccCc
Q 044996 151 LEGNKFEGQI-PDF--QQKDLVSFNVSNNALFGSIS 183 (678)
Q Consensus 151 l~~N~l~g~~-p~~--~~~~l~~l~l~~N~l~g~ip 183 (678)
|++|+|++.+ |.. .+++|+.|+|++|.|++.+|
T Consensus 515 Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 515 LCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 9999998876 663 67789999999999988655
No 343
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.39 E-value=3.7e-13 Score=127.11 Aligned_cols=127 Identities=17% Similarity=0.240 Sum_probs=102.4
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCC-CCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCcccc
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELR-EMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLR 123 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~-~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~ 123 (678)
..+..|+|++|.+. .++. +..+. +|+.|+|++|.+++. +.+..+ ++|++|+|++|+|+ .+|+.+|..+++|+
T Consensus 19 ~~L~~L~l~~n~l~-~i~~--~~~~~~~L~~L~Ls~N~l~~~-~~l~~l--~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 19 VRDRELDLRGYKIP-VIEN--LGATLDQFDAIDFSDNEIRKL-DGFPLL--RRLKTLLVNNNRIC-RIGEGLDQALPDLT 91 (176)
T ss_dssp TSCEEEECTTSCCC-SCCC--GGGGTTCCSEEECCSSCCCEE-CCCCCC--SSCCEEECCSSCCC-EECSCHHHHCTTCC
T ss_pred CCceEEEeeCCCCc-hhHH--hhhcCCCCCEEECCCCCCCcc-cccccC--CCCCEEECCCCccc-ccCcchhhcCCCCC
Confidence 46889999999988 4552 44444 999999999999885 666666 67999999999999 56766678999999
Q ss_pred eeeccccccccCCch--hhcCCCCCCeEeccCCcccccCCcc------CCCCCcEEEeecCcccc
Q 044996 124 KLLLADNQFNGPIPE--SLTRLSRLVELRLEGNKFEGQIPDF------QQKDLVSFNVSNNALFG 180 (678)
Q Consensus 124 ~l~l~~N~~~g~~p~--~~~~l~~L~~l~l~~N~l~g~~p~~------~~~~l~~l~l~~N~l~g 180 (678)
+|+|++|+++ .+|. .+..+++|+.|+|++|.++ .+|.. .+++|+.|++++|.+..
T Consensus 92 ~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 92 ELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp EEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred EEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 9999999995 5776 7889999999999999998 45542 56789999999988653
No 344
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.39 E-value=7.6e-13 Score=148.86 Aligned_cols=137 Identities=23% Similarity=0.251 Sum_probs=97.7
Q ss_pred cEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcccCccccccChhhhcCCcccce
Q 044996 46 KIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRK 124 (678)
Q Consensus 46 ~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~ 124 (678)
+++.|+|++|.+.+ +++..+..+++|+.|+|++|++++..|. +..+ ++|++|||++|+|+ .||.. .+++|++
T Consensus 53 ~L~~L~Ls~N~i~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l--~~L~~L~Ls~N~l~-~lp~~---~l~~L~~ 125 (562)
T 3a79_B 53 RTKALSLSQNSISE-LRMPDISFLSELRVLRLSHNRIRSLDFHVFLFN--QDLEYLDVSHNRLQ-NISCC---PMASLRH 125 (562)
T ss_dssp TCCEEECCSSCCCC-CCGGGTTTCTTCCEEECCSCCCCEECTTTTTTC--TTCCEEECTTSCCC-EECSC---CCTTCSE
T ss_pred CcCEEECCCCCccc-cChhhhccCCCccEEECCCCCCCcCCHHHhCCC--CCCCEEECCCCcCC-ccCcc---ccccCCE
Confidence 57778888887773 4445677788888888888888877664 4444 66888888888887 67754 6788888
Q ss_pred eecccccccc-CCchhhcCCCCCCeEeccCCcccccCCccCCCCC--cEEEeecCcc--cccCchhhhcCC
Q 044996 125 LLLADNQFNG-PIPESLTRLSRLVELRLEGNKFEGQIPDFQQKDL--VSFNVSNNAL--FGSISPALRELD 190 (678)
Q Consensus 125 l~l~~N~~~g-~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~l--~~l~l~~N~l--~g~ip~~~~~l~ 190 (678)
|+|++|++++ .+|..|+++++|++|+|++|.+++. .-....+| +.|++++|.+ ++..|..+..+.
T Consensus 126 L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~ 195 (562)
T 3a79_B 126 LDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL-DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPN 195 (562)
T ss_dssp EECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT-TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECC
T ss_pred EECCCCCccccCchHhhcccCcccEEecCCCccccC-chhhhhhceeeEEEeecccccccccCcccccccC
Confidence 8888888876 5667788888888888888887752 21233444 8888888887 777776665543
No 345
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.38 E-value=1.3e-12 Score=136.63 Aligned_cols=136 Identities=19% Similarity=0.275 Sum_probs=90.4
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccc--cCC-cccccCCCCccEEEcccCccccccChhhhcCCcc
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEG--PMP-DLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTS 121 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g--~~p-~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~ 121 (678)
..+..|+|++|.+. .+++..+..+++|+.|+|++|.+.. ..+ .+..+ ++|++|+|++|+++ .+|... .++
T Consensus 121 ~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l--~~L~~L~l~~n~l~-~l~~~~---~~~ 193 (330)
T 1xku_A 121 KTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGM--KKLSYIRIADTNIT-TIPQGL---PPS 193 (330)
T ss_dssp TTCCEEECCSSCCC-BBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGC--TTCCEEECCSSCCC-SCCSSC---CTT
T ss_pred ccccEEECCCCccc-ccCHhHhcCCccccEEECCCCcCCccCcChhhccCC--CCcCEEECCCCccc-cCCccc---ccc
Confidence 35788888888887 4555668888888888888888853 444 23444 55777777777776 466442 156
Q ss_pred cceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccccCchhhhc
Q 044996 122 LRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGSISPALRE 188 (678)
Q Consensus 122 L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ip~~~~~ 188 (678)
|+.|+|++|++++..|..+..+++|+.|+|++|.+++..+.. ...+|+.|+|++|.++ .+|..+..
T Consensus 194 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 261 (330)
T 1xku_A 194 LTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLAD 261 (330)
T ss_dssp CSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTT
T ss_pred CCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhcc
Confidence 777777777777666666777777777777777776655532 4456677777777666 55655443
No 346
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.38 E-value=6e-13 Score=125.77 Aligned_cols=114 Identities=26% Similarity=0.439 Sum_probs=98.5
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcccCccccccChhhhcCCcccc
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLR 123 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~ 123 (678)
..++.|+|++|.+. .+++..+..+++|+.|+|++|+|++..+. +..+ .+|++|+|++|+|++ +|+..|.++++|+
T Consensus 28 ~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~l~~N~l~~-~~~~~~~~l~~L~ 103 (177)
T 2o6r_A 28 SSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKL--TKLTILYLHENKLQS-LPNGVFDKLTQLK 103 (177)
T ss_dssp TTCSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTC--TTCCEEECCSSCCCC-CCTTTTTTCTTCC
T ss_pred CCCcEEEeCCCccc-EeCHHHhcCcccccEEECCCCcceEeChhHccCC--CccCEEECCCCCccc-cCHHHhhCCcccC
Confidence 46899999999998 56666789999999999999999976664 3455 789999999999995 5556689999999
Q ss_pred eeeccccccccCCchhhcCCCCCCeEeccCCcccccCCc
Q 044996 124 KLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPD 162 (678)
Q Consensus 124 ~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~ 162 (678)
+|+|++|+|++..+..+..+++|++|+|++|.|++..|.
T Consensus 104 ~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 104 ELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred EEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 999999999976666678999999999999999987763
No 347
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.38 E-value=1e-12 Score=137.54 Aligned_cols=155 Identities=23% Similarity=0.317 Sum_probs=119.9
Q ss_pred CCcceEEecC-----------CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEc
Q 044996 35 ANWNGVLCHR-----------GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYL 102 (678)
Q Consensus 35 ~~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~L 102 (678)
|.|..+.|+. .+++.|+|++|.+.+ +++..+..+++|+.|+|++|++++..|. +..+ ++|++|+|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~L 109 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISE-LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPL--RKLQKLYI 109 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCE-ECTTTTTTCTTCCEEECCSSCCCEECGGGSTTC--TTCCEEEC
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCc-cCHhHhhCCCCCcEEECCCCccCccCHhHhhCc--CCCCEEEC
Confidence 5799999962 257899999999884 4445689999999999999999988774 5555 77999999
Q ss_pred ccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccc--cCCcc-CCCCCcEEEeecCccc
Q 044996 103 SNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEG--QIPDF-QQKDLVSFNVSNNALF 179 (678)
Q Consensus 103 s~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g--~~p~~-~~~~l~~l~l~~N~l~ 179 (678)
++|+++ .+|..++ ++|++|+|++|++++..+..|.++++|+.|+|++|.++. ..|.. ...+|+.|++++|.++
T Consensus 110 ~~n~l~-~l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~ 185 (332)
T 2ft3_A 110 SKNHLV-EIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLT 185 (332)
T ss_dssp CSSCCC-SCCSSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCS
T ss_pred CCCcCC-ccCcccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCC
Confidence 999998 7887633 789999999999997777778999999999999999963 44442 2228889999999987
Q ss_pred ccCchhh-hcCCCCCCCCC
Q 044996 180 GSISPAL-RELDPSSFSGN 197 (678)
Q Consensus 180 g~ip~~~-~~l~~~~~~gn 197 (678)
+ +|..+ .++....+.+|
T Consensus 186 ~-l~~~~~~~L~~L~l~~n 203 (332)
T 2ft3_A 186 G-IPKDLPETLNELHLDHN 203 (332)
T ss_dssp S-CCSSSCSSCSCCBCCSS
T ss_pred c-cCccccCCCCEEECCCC
Confidence 6 55433 24444455555
No 348
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.38 E-value=6e-13 Score=121.90 Aligned_cols=118 Identities=19% Similarity=0.271 Sum_probs=99.0
Q ss_pred cCCCCCEEEccCCccc-ccCCcc-cccCCCCccEEEcccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCC
Q 044996 68 ELREMRTLSLMRNNLE-GPMPDL-RQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSR 145 (678)
Q Consensus 68 ~l~~L~~L~Ls~N~l~-g~~p~~-~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~ 145 (678)
..++|+.|+|++|.++ |.+|.. ..+ ++|++|+|++|++++. . .+.++++|++|+|++|.+++.+|..+..+++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l--~~L~~L~l~~n~l~~~--~-~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~ 89 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEF--EELEFLSTINVGLTSI--A-NLPKLNKLKKLELSDNRVSGGLEVLAEKCPN 89 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTC--TTCCEEECTTSCCCCC--T-TCCCCTTCCEEECCSSCCCSCTHHHHHHCTT
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhc--CCCcEEECcCCCCCCc--h-hhhcCCCCCEEECCCCcccchHHHHhhhCCC
Confidence 3578999999999999 888853 445 7899999999999965 3 4899999999999999999999999999999
Q ss_pred CCeEeccCCccccc-CCc--cCCCCCcEEEeecCcccccCc---hhhhcCC
Q 044996 146 LVELRLEGNKFEGQ-IPD--FQQKDLVSFNVSNNALFGSIS---PALRELD 190 (678)
Q Consensus 146 L~~l~l~~N~l~g~-~p~--~~~~~l~~l~l~~N~l~g~ip---~~~~~l~ 190 (678)
|++|+|++|.+++. .|. ..+++|+.|++++|.+++..+ ..+..+.
T Consensus 90 L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~ 140 (149)
T 2je0_A 90 LTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLP 140 (149)
T ss_dssp CCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCT
T ss_pred CCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCC
Confidence 99999999999974 223 367899999999999988665 3454443
No 349
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.37 E-value=1e-12 Score=123.42 Aligned_cols=104 Identities=24% Similarity=0.364 Sum_probs=64.8
Q ss_pred EEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcccCccccccChhhhcCCcccceeecc
Q 044996 50 LKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLA 128 (678)
Q Consensus 50 l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~ 128 (678)
|++++++|. .+|..+ .++|+.|+|++|+|++..|. +..+ .+|++|+|++|+|+ .+|+..|.++++|++|+|+
T Consensus 14 l~~s~n~l~-~ip~~~---~~~l~~L~L~~N~i~~~~~~~~~~l--~~L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 14 VDCSGKSLA-SVPTGI---PTTTQVLYLYDNQITKLEPGVFDRL--TQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp EECTTSCCS-SCCSCC---CTTCSEEECCSSCCCCCCTTTTTTC--TTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECC
T ss_pred EEeCCCCcC-ccCccC---CCCCcEEEcCCCcCCccChhhhcCc--ccCCEEECCCCCcC-ccChhhccCCCCCCEEECC
Confidence 444555555 355432 35667777777777766553 3444 55777777777776 4555556667777777777
Q ss_pred ccccccCCchhhcCCCCCCeEeccCCcccccC
Q 044996 129 DNQFNGPIPESLTRLSRLVELRLEGNKFEGQI 160 (678)
Q Consensus 129 ~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~ 160 (678)
+|+|++..|..|.++++|++|+|++|.|++..
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 77777655555666777777777766666543
No 350
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.37 E-value=1.2e-14 Score=140.37 Aligned_cols=133 Identities=22% Similarity=0.287 Sum_probs=113.8
Q ss_pred CcEEEEEeCCCCceeecCh-----HHhhcCCCCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCC
Q 044996 45 GKIWGLKLEDMGLQGNIDI-----TILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGM 119 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~-----~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l 119 (678)
.+|+.++|..+.+.|.+|. ..+..+++|+.|+|++|++++ +|.+..+ ++|++|+|++|+++ .+|.. +..+
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~~~~~l--~~L~~L~l~~n~l~-~l~~~-~~~~ 92 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-ISSLSGM--ENLRILSLGRNLIK-KIENL-DAVA 92 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CCCHHHH--TTCCEEEEEEEEEC-SCSSH-HHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-ccccccC--CCCCEEECCCCCcc-cccch-hhcC
Confidence 4677788888888888764 358999999999999999998 7777777 77999999999999 78864 7888
Q ss_pred cccceeeccccccccCCchhhcCCCCCCeEeccCCcccccCC--c-cCCCCCcEEEeecCcccccCch
Q 044996 120 TSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIP--D-FQQKDLVSFNVSNNALFGSISP 184 (678)
Q Consensus 120 ~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p--~-~~~~~l~~l~l~~N~l~g~ip~ 184 (678)
++|+.|+|++|++++ +| .+..+++|++|+|++|.+++..+ . ..+++|+.|++++|.+++.+|.
T Consensus 93 ~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 93 DTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp HHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 999999999999997 56 69999999999999999985322 2 3678999999999999988765
No 351
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.37 E-value=1.6e-12 Score=121.71 Aligned_cols=112 Identities=21% Similarity=0.249 Sum_probs=96.5
Q ss_pred hcCCCCCEEEccCCccc-ccCCcc-cccCCCCccEEEcccCccccccChhhhcCCcccceeeccccccccCCchhhcCCC
Q 044996 67 KELREMRTLSLMRNNLE-GPMPDL-RQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLS 144 (678)
Q Consensus 67 ~~l~~L~~L~Ls~N~l~-g~~p~~-~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~ 144 (678)
...++|+.|+|++|+++ |.+|.. ..+ ++|++|+|++|.+++. . .|..+++|++|+|++|++++.+|..+.+++
T Consensus 21 ~~~~~L~~L~l~~n~l~~~~i~~~~~~l--~~L~~L~l~~n~l~~~--~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 95 (168)
T 2ell_A 21 RTPAAVRELVLDNCKSNDGKIEGLTAEF--VNLEFLSLINVGLISV--S-NLPKLPKLKKLELSENRIFGGLDMLAEKLP 95 (168)
T ss_dssp SCTTSCSEEECCSCBCBTTBCSSCCGGG--GGCCEEEEESSCCCCC--S-SCCCCSSCCEEEEESCCCCSCCCHHHHHCT
T ss_pred CCcccCCEEECCCCCCChhhHHHHHHhC--CCCCEEeCcCCCCCCh--h-hhccCCCCCEEECcCCcCchHHHHHHhhCC
Confidence 34588999999999998 888864 555 7799999999999964 3 389999999999999999999999999999
Q ss_pred CCCeEeccCCcccccC--Cc-cCCCCCcEEEeecCcccccCc
Q 044996 145 RLVELRLEGNKFEGQI--PD-FQQKDLVSFNVSNNALFGSIS 183 (678)
Q Consensus 145 ~L~~l~l~~N~l~g~~--p~-~~~~~l~~l~l~~N~l~g~ip 183 (678)
+|++|+|++|.+++.. +. ..+.+|+.|++++|.+++..+
T Consensus 96 ~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 137 (168)
T 2ell_A 96 NLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLND 137 (168)
T ss_dssp TCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTT
T ss_pred CCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHH
Confidence 9999999999998743 23 267899999999999987655
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.36 E-value=1.4e-12 Score=145.43 Aligned_cols=118 Identities=23% Similarity=0.336 Sum_probs=83.4
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCcccce
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRK 124 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~ 124 (678)
.++..|+|++|.|. .|| ..+++|+.|+|++|+|++ +|.+. .+|++|+|++|+|++ ||. .+++|+.
T Consensus 80 ~~L~~L~Ls~N~l~-~ip----~~l~~L~~L~Ls~N~l~~-ip~l~----~~L~~L~Ls~N~l~~-lp~----~l~~L~~ 144 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP----ELPASLEYLDACDNRLST-LPELP----ASLKHLDVDNNQLTM-LPE----LPALLEY 144 (571)
T ss_dssp TTCSEEECCSSCCS-CCC----CCCTTCCEEECCSSCCSC-CCCCC----TTCCEEECCSSCCSC-CCC----CCTTCCE
T ss_pred CCCCEEECcCCCCc-ccc----cccCCCCEEEccCCCCCC-cchhh----cCCCEEECCCCcCCC-CCC----cCccccE
Confidence 35788888888887 676 347888888888888887 66522 267888888888875 774 4677777
Q ss_pred eeccccccccCCchhhcCCCCCCeEeccCCcccccCCccCCCCCcEEEeecCcccccCch
Q 044996 125 LLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQQKDLVSFNVSNNALFGSISP 184 (678)
Q Consensus 125 l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~l~~l~l~~N~l~g~ip~ 184 (678)
|+|++|+|++ +|. .+++|++|+|++|.|++ +|.+ ..+|+.|+|++|+|+ .+|.
T Consensus 145 L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~l-~~~L~~L~Ls~N~L~-~lp~ 197 (571)
T 3cvr_A 145 INADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPEL-PESLEALDVSTNLLE-SLPA 197 (571)
T ss_dssp EECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCC-CTTCCEEECCSSCCS-SCCC
T ss_pred EeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cchh-hCCCCEEECcCCCCC-chhh
Confidence 7777777775 665 46677777777777776 5553 366777777777776 4554
No 353
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.36 E-value=8.1e-13 Score=144.45 Aligned_cols=139 Identities=15% Similarity=0.162 Sum_probs=98.1
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCcccce
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRK 124 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~ 124 (678)
..+..|+|++|...|.++ +..+++|+.|+|++|++++ +| +..+ ++|+.|+|++|+|++ ++ ++.+++|+.
T Consensus 148 ~~L~~L~l~~n~~~~~~~---~~~l~~L~~L~ls~n~l~~-l~-l~~l--~~L~~L~l~~N~l~~-~~---l~~l~~L~~ 216 (457)
T 3bz5_A 148 TQLTELDCHLNKKITKLD---VTPQTQLTTLDCSFNKITE-LD-VSQN--KLLNRLNCDTNNITK-LD---LNQNIQLTF 216 (457)
T ss_dssp TTCCEEECTTCSCCCCCC---CTTCTTCCEEECCSSCCCC-CC-CTTC--TTCCEEECCSSCCSC-CC---CTTCTTCSE
T ss_pred CcCCEEECCCCCcccccc---cccCCcCCEEECCCCccce-ec-cccC--CCCCEEECcCCcCCe-ec---cccCCCCCE
Confidence 457788888887777774 6778888888888888887 45 4555 668888888888885 33 677888888
Q ss_pred eeccccccccCCchhhcCCCCCCeEeccCCcccccCCccCCC----------CCcEEEeecCcccccCch-hhhcCCCCC
Q 044996 125 LLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQQK----------DLVSFNVSNNALFGSISP-ALRELDPSS 193 (678)
Q Consensus 125 l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~----------~l~~l~l~~N~l~g~ip~-~~~~l~~~~ 193 (678)
|+|++|++++ +| ++.+++|+.|+|++|+|+|..+. ... +|+.|++++|.+.|.+|. .+.++....
T Consensus 217 L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~-~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~~~l~~L~~L~ 292 (457)
T 3bz5_A 217 LDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVS-TLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELD 292 (457)
T ss_dssp EECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCT-TCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCTTCCCCC
T ss_pred EECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHH-HCCCCCEEeccCCCCCEEECCCCccCCcccccccccCCEEE
Confidence 8888888887 66 77888888888888888865332 222 455666666666676663 234455555
Q ss_pred CCCCC
Q 044996 194 FSGNR 198 (678)
Q Consensus 194 ~~gn~ 198 (678)
+.+|.
T Consensus 293 Ls~n~ 297 (457)
T 3bz5_A 293 VTHNT 297 (457)
T ss_dssp CTTCT
T ss_pred CCCCc
Confidence 66664
No 354
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.36 E-value=1.5e-12 Score=134.80 Aligned_cols=126 Identities=21% Similarity=0.376 Sum_probs=84.2
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCcccce
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRK 124 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~ 124 (678)
.++..|+|++|.+.+ +++ +..+++|+.|+|++|.+++ +|.+..+ ++|++|+|++|++++ +|. +..+++|+.
T Consensus 63 ~~L~~L~L~~n~i~~-~~~--~~~l~~L~~L~L~~n~l~~-~~~~~~l--~~L~~L~l~~n~l~~-~~~--l~~l~~L~~ 133 (308)
T 1h6u_A 63 NNLIGLELKDNQITD-LAP--LKNLTKITELELSGNPLKN-VSAIAGL--QSIKTLDLTSTQITD-VTP--LAGLSNLQV 133 (308)
T ss_dssp TTCCEEECCSSCCCC-CGG--GTTCCSCCEEECCSCCCSC-CGGGTTC--TTCCEEECTTSCCCC-CGG--GTTCTTCCE
T ss_pred CCCCEEEccCCcCCC-Chh--HccCCCCCEEEccCCcCCC-chhhcCC--CCCCEEECCCCCCCC-chh--hcCCCCCCE
Confidence 457777777777763 332 6677777777777777765 3445544 567777777777774 442 677777777
Q ss_pred eeccccccccCCchhhcCCCCCCeEeccCCcccccCCccCCCCCcEEEeecCccccc
Q 044996 125 LLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQQKDLVSFNVSNNALFGS 181 (678)
Q Consensus 125 l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~l~~l~l~~N~l~g~ 181 (678)
|+|++|++++..+ +..+++|+.|+|++|.+++..+-..+.+|+.|++++|.+++.
T Consensus 134 L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~ 188 (308)
T 1h6u_A 134 LYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDI 188 (308)
T ss_dssp EECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCC
T ss_pred EECCCCccCcCcc--ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccCcC
Confidence 7777777775433 677777777777777777544433556777777777777653
No 355
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.36 E-value=1.4e-12 Score=146.13 Aligned_cols=128 Identities=17% Similarity=0.271 Sum_probs=101.9
Q ss_pred HhhcCCCCCEEE-ccCCcccccCCc-------ccccCCCCccEEEcccCccccccChhhhcCCcccceeeccccccccCC
Q 044996 65 ILKELREMRTLS-LMRNNLEGPMPD-------LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPI 136 (678)
Q Consensus 65 ~l~~l~~L~~L~-Ls~N~l~g~~p~-------~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~ 136 (678)
.++.|++|+.|+ ++.|.+.. ++. +..+....|+.|+|++|+|++ ||. |+++++|+.|+|++|+|+ .+
T Consensus 404 ~l~~l~~L~~L~~l~~n~~~~-L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~--~~~l~~L~~L~Ls~N~l~-~l 478 (567)
T 1dce_A 404 TLQYFSTLKAVDPMRAAYLDD-LRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH--LEQLLLVTHLDLSHNRLR-AL 478 (567)
T ss_dssp HHHHHHHHHHHCGGGHHHHHH-HHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC--GGGGTTCCEEECCSSCCC-CC
T ss_pred HHHHHHhcccCcchhhcccch-hhhhhhhcccccccCccCceEEEecCCCCCC-CcC--ccccccCcEeecCccccc-cc
Confidence 467788888888 66665432 110 111111459999999999996 884 899999999999999999 89
Q ss_pred chhhcCCCCCCeEeccCCcccccCCcc-CCCCCcEEEeecCcccccC-chhhhcCC---CCCCCCCC
Q 044996 137 PESLTRLSRLVELRLEGNKFEGQIPDF-QQKDLVSFNVSNNALFGSI-SPALRELD---PSSFSGNR 198 (678)
Q Consensus 137 p~~~~~l~~L~~l~l~~N~l~g~~p~~-~~~~l~~l~l~~N~l~g~i-p~~~~~l~---~~~~~gn~ 198 (678)
|..|+++++|+.|+|++|.|++ +|.+ .+++|+.|+|++|+|++.+ |..+..+. ...+.+|+
T Consensus 479 p~~~~~l~~L~~L~Ls~N~l~~-lp~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~ 544 (567)
T 1dce_A 479 PPALAALRCLEVLQASDNALEN-VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNS 544 (567)
T ss_dssp CGGGGGCTTCCEEECCSSCCCC-CGGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSG
T ss_pred chhhhcCCCCCEEECCCCCCCC-CcccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCc
Confidence 9999999999999999999997 7754 6789999999999999987 88777654 44677775
No 356
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.36 E-value=1.6e-12 Score=133.27 Aligned_cols=124 Identities=27% Similarity=0.364 Sum_probs=68.6
Q ss_pred cEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCccccee
Q 044996 46 KIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKL 125 (678)
Q Consensus 46 ~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l 125 (678)
++..|+|++|.+.+ +++ +..+++|+.|+|++|.+++ +|.+..+ ++|++|+|++|++++ ++ . +..+++|+.|
T Consensus 69 ~L~~L~L~~n~l~~-~~~--l~~l~~L~~L~l~~n~l~~-~~~l~~l--~~L~~L~L~~n~i~~-~~-~-l~~l~~L~~L 139 (291)
T 1h6t_A 69 NVTKLFLNGNKLTD-IKP--LANLKNLGWLFLDENKVKD-LSSLKDL--KKLKSLSLEHNGISD-IN-G-LVHLPQLESL 139 (291)
T ss_dssp TCCEEECCSSCCCC-CGG--GTTCTTCCEEECCSSCCCC-GGGGTTC--TTCCEEECTTSCCCC-CG-G-GGGCTTCCEE
T ss_pred CCCEEEccCCccCC-Ccc--cccCCCCCEEECCCCcCCC-ChhhccC--CCCCEEECCCCcCCC-Ch-h-hcCCCCCCEE
Confidence 45556666665553 222 5556666666666666554 3334434 456666666666653 33 2 5556666666
Q ss_pred eccccccccCCchhhcCCCCCCeEeccCCcccccCCccCCCCCcEEEeecCcccc
Q 044996 126 LLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQQKDLVSFNVSNNALFG 180 (678)
Q Consensus 126 ~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~l~~l~l~~N~l~g 180 (678)
+|++|++++. ..+..+++|+.|+|++|.+++..|-..+.+|+.|+|++|.+++
T Consensus 140 ~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 140 YLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp ECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB
T ss_pred EccCCcCCcc--hhhccCCCCCEEEccCCccccchhhcCCCccCEEECCCCcCCC
Confidence 6666666543 3455666666666666666554443345556666666666554
No 357
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.36 E-value=2.4e-12 Score=145.09 Aligned_cols=142 Identities=25% Similarity=0.316 Sum_probs=115.7
Q ss_pred CCcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCcccc
Q 044996 44 RGKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLR 123 (678)
Q Consensus 44 ~~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~ 123 (678)
..++..|+|++|.|.+. ++ +..|++|+.|+|++|.|.+ +|.+..+ ++|+.|+|++|+|++ +| . +..|++|+
T Consensus 64 l~~L~~L~Ls~N~l~~~-~~--l~~l~~L~~L~Ls~N~l~~-l~~l~~l--~~L~~L~Ls~N~l~~-l~-~-l~~l~~L~ 134 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLTDI-KP--LTNLKNLGWLFLDENKIKD-LSSLKDL--KKLKSLSLEHNGISD-IN-G-LVHLPQLE 134 (605)
T ss_dssp CTTCCEEECTTSCCCCC-GG--GGGCTTCCEEECCSSCCCC-CTTSTTC--TTCCEEECTTSCCCC-CG-G-GGGCTTCS
T ss_pred CCCCCEEEeeCCCCCCC-hh--hccCCCCCEEECcCCCCCC-ChhhccC--CCCCEEEecCCCCCC-Cc-c-ccCCCccC
Confidence 35789999999999864 33 8899999999999999987 5666666 779999999999995 54 3 88999999
Q ss_pred eeeccccccccCCchhhcCCCCCCeEeccCCcccccCCccCCCCCcEEEeecCcccccCchhhhc---CCCCCCCCCC
Q 044996 124 KLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQQKDLVSFNVSNNALFGSISPALRE---LDPSSFSGNR 198 (678)
Q Consensus 124 ~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~l~~l~l~~N~l~g~ip~~~~~---l~~~~~~gn~ 198 (678)
.|+|++|++++. ..+..|++|+.|+|++|.|++..|-..+.+|+.|+|++|.|++. | .+.. |....+.+|+
T Consensus 135 ~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~L~~N~ 208 (605)
T 1m9s_A 135 SLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQE 208 (605)
T ss_dssp EEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEECCSEE
T ss_pred EEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEccCCc
Confidence 999999999975 67899999999999999999887755778999999999999873 3 3433 3344455554
No 358
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.35 E-value=1e-12 Score=136.56 Aligned_cols=130 Identities=22% Similarity=0.193 Sum_probs=100.9
Q ss_pred cCCCCCEEEccCCcccccCC-cccccCCCCccEEEcccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCC
Q 044996 68 ELREMRTLSLMRNNLEGPMP-DLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRL 146 (678)
Q Consensus 68 ~l~~L~~L~Ls~N~l~g~~p-~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L 146 (678)
.+++|+.|+|++|++++..| .+..+ ++|++|+|++|.+++..|..++..+++|++|+|++|.+++. |. ...+++|
T Consensus 118 ~~~~L~~L~l~~N~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L 193 (317)
T 3o53_A 118 RGQGKKNIYLANNKITMLRDLDEGCR--SRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKL 193 (317)
T ss_dssp CCSSCEEEECCSSCCCSGGGBCTGGG--SSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTC
T ss_pred ccCCCCEEECCCCCCCCccchhhhcc--CCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccC
Confidence 36778888888888887666 34445 67999999999999777766446789999999999999865 33 3458999
Q ss_pred CeEeccCCcccccCCcc-CCCCCcEEEeecCcccccCchhhhc---CCCCCCCCCCCCCC
Q 044996 147 VELRLEGNKFEGQIPDF-QQKDLVSFNVSNNALFGSISPALRE---LDPSSFSGNRDLCG 202 (678)
Q Consensus 147 ~~l~l~~N~l~g~~p~~-~~~~l~~l~l~~N~l~g~ip~~~~~---l~~~~~~gn~~lc~ 202 (678)
++|+|++|.+++..+.+ ...+|+.|+|++|.|++ +|..+.. +....+.+|+..|+
T Consensus 194 ~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 194 KTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp CEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHH
T ss_pred CEEECCCCcCCcchhhhcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCc
Confidence 99999999999765553 56789999999999984 7766543 44556888887764
No 359
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.35 E-value=1.8e-12 Score=122.15 Aligned_cols=106 Identities=24% Similarity=0.382 Sum_probs=75.0
Q ss_pred EEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcccCccccccChhhhcCCcccceee
Q 044996 48 WGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLL 126 (678)
Q Consensus 48 ~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~ 126 (678)
..+++++++|. .+|..+ .++|+.|+|++|+|++.+|. +..+ ++|++|+|++|+|++ ||+..|.++++|++|+
T Consensus 15 ~~l~~~~n~l~-~iP~~~---~~~L~~L~Ls~N~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~-i~~~~~~~l~~L~~L~ 87 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGI---PTDKQRLWLNNNQITKLEPGVFDHL--VNLQQLYFNSNKLTA-IPTGVFDKLTQLTQLD 87 (174)
T ss_dssp SEEECCSSCCS-SCCSCC---CTTCSEEECCSSCCCCCCTTTTTTC--TTCCEEECCSSCCCC-CCTTTTTTCTTCCEEE
T ss_pred cEEEeCCCCCC-ccCCCc---CCCCcEEEeCCCCccccCHHHhcCC--cCCCEEECCCCCCCc-cChhHhCCcchhhEEE
Confidence 35677777774 666532 36778888888888877663 4444 668888888888874 6666577788888888
Q ss_pred ccccccccCCchhhcCCCCCCeEeccCCcccccC
Q 044996 127 LADNQFNGPIPESLTRLSRLVELRLEGNKFEGQI 160 (678)
Q Consensus 127 l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~ 160 (678)
|++|+|++..+..|..+++|++|+|++|.|....
T Consensus 88 L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 88 LNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCSSCCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred CCCCccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 8888887655555777788888888877776443
No 360
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.34 E-value=3.2e-12 Score=143.25 Aligned_cols=141 Identities=23% Similarity=0.304 Sum_probs=117.0
Q ss_pred EEecCCcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCC-cccccCCCCccEEEcccCccccccChhhhcC
Q 044996 40 VLCHRGKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMP-DLRQLGNGALRSVYLSNNRFSGEIPTDAFDG 118 (678)
Q Consensus 40 v~C~~~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~ 118 (678)
..|....+ .++++++++ .+|... .++|+.|+|++|++++..| .+..+ ++|++|+|++|++++..|. .|.+
T Consensus 2 ~~C~~~~~--c~~~~~~l~-~ip~~~---~~~L~~L~Ls~n~l~~~~~~~~~~l--~~L~~L~Ls~n~i~~~~~~-~~~~ 72 (549)
T 2z81_A 2 LSCDASGV--CDGRSRSFT-SIPSGL---TAAMKSLDLSFNKITYIGHGDLRAC--ANLQVLILKSSRINTIEGD-AFYS 72 (549)
T ss_dssp CEECTTSE--EECTTSCCS-SCCSCC---CTTCCEEECCSSCCCEECSSTTSSC--TTCCEEECTTSCCCEECTT-TTTT
T ss_pred ccCCCCce--EECCCCccc-cccccC---CCCccEEECcCCccCccChhhhhcC--CcccEEECCCCCcCccChh-hccc
Confidence 35765555 788999988 788642 3789999999999999877 46666 7899999999999975554 5999
Q ss_pred CcccceeeccccccccCCchhhcCCCCCCeEeccCCcccc-cCCcc--CCCCCcEEEeecCcccccCch-hhhcC
Q 044996 119 MTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEG-QIPDF--QQKDLVSFNVSNNALFGSISP-ALREL 189 (678)
Q Consensus 119 l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g-~~p~~--~~~~l~~l~l~~N~l~g~ip~-~~~~l 189 (678)
+++|++|+|++|++++..|..|+++++|++|+|++|.+++ .+|.. .+++|+.|++++|.+.+.+|. .+..+
T Consensus 73 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l 147 (549)
T 2z81_A 73 LGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGL 147 (549)
T ss_dssp CTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTC
T ss_pred cccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcc
Confidence 9999999999999999888889999999999999999996 35542 678999999999997777774 44443
No 361
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.33 E-value=3.6e-12 Score=133.29 Aligned_cols=145 Identities=21% Similarity=0.368 Sum_probs=119.3
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCcccce
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRK 124 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~ 124 (678)
.++..|+|++|.+.+..| ..+..+++|+.|+|++|++. .+|.. .. .+|++|+|++|+++ .+|+..|.++++|+.
T Consensus 78 ~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~-~l~~~--~~-~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~ 151 (332)
T 2ft3_A 78 QHLYALVLVNNKISKIHE-KAFSPLRKLQKLYISKNHLV-EIPPN--LP-SSLVELRIHDNRIR-KVPKGVFSGLRNMNC 151 (332)
T ss_dssp TTCCEEECCSSCCCEECG-GGSTTCTTCCEEECCSSCCC-SCCSS--CC-TTCCEEECCSSCCC-CCCSGGGSSCSSCCE
T ss_pred CCCcEEECCCCccCccCH-hHhhCcCCCCEEECCCCcCC-ccCcc--cc-ccCCEEECCCCccC-ccCHhHhCCCccCCE
Confidence 468999999999986544 56899999999999999998 45532 11 67999999999999 567667999999999
Q ss_pred eeccccccc--cCCchhhcCCCCCCeEeccCCcccccCCccCCCCCcEEEeecCcccccCchhhhc---CCCCCCCCC
Q 044996 125 LLLADNQFN--GPIPESLTRLSRLVELRLEGNKFEGQIPDFQQKDLVSFNVSNNALFGSISPALRE---LDPSSFSGN 197 (678)
Q Consensus 125 l~l~~N~~~--g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~l~~l~l~~N~l~g~ip~~~~~---l~~~~~~gn 197 (678)
|+|++|.++ |..|..+..+ +|+.|++++|.+++ +|.....+|+.|++++|.+++..|..+.. +....+.+|
T Consensus 152 L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N 227 (332)
T 2ft3_A 152 IEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHN 227 (332)
T ss_dssp EECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSS
T ss_pred EECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCC
Confidence 999999996 5788888888 99999999999986 77766689999999999998877665544 344455555
No 362
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.33 E-value=4.5e-12 Score=118.95 Aligned_cols=107 Identities=24% Similarity=0.327 Sum_probs=90.9
Q ss_pred CCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEec
Q 044996 72 MRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRL 151 (678)
Q Consensus 72 L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l 151 (678)
.+.|++++|.|+. +|. .+. .+|++|+|++|+|++..|. .|.++++|++|+|++|+|++..|..|..+++|++|+|
T Consensus 11 ~~~l~~s~n~l~~-ip~--~~~-~~l~~L~L~~N~i~~~~~~-~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 85 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPT--GIP-TTTQVLYLYDNQITKLEPG-VFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSL 85 (170)
T ss_dssp TTEEECTTSCCSS-CCS--CCC-TTCSEEECCSSCCCCCCTT-TTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCEEEeCCCCcCc-cCc--cCC-CCCcEEEcCCCcCCccChh-hhcCcccCCEEECCCCCcCccChhhccCCCCCCEEEC
Confidence 4689999999987 553 121 6799999999999965564 5999999999999999999877777899999999999
Q ss_pred cCCcccccCCc-c-CCCCCcEEEeecCcccccCc
Q 044996 152 EGNKFEGQIPD-F-QQKDLVSFNVSNNALFGSIS 183 (678)
Q Consensus 152 ~~N~l~g~~p~-~-~~~~l~~l~l~~N~l~g~ip 183 (678)
++|+|++..+. + .+.+|+.|+|++|.|++..+
T Consensus 86 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 86 NDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 99999976665 2 67899999999999987654
No 363
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.33 E-value=3.6e-12 Score=128.61 Aligned_cols=125 Identities=18% Similarity=0.314 Sum_probs=84.3
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCcccce
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRK 124 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~ 124 (678)
.++..|+|+++++. .++ .+..+++|+.|+|++|++++..| +..+ ++|++|+|++|++++ +|. +.. ++|+.
T Consensus 41 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~L~~N~i~~~~~-l~~l--~~L~~L~L~~N~l~~-l~~--~~~-~~L~~ 110 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQ-SLA--GMQFFTNLKELHLSHNQISDLSP-LKDL--TKLEELSVNRNRLKN-LNG--IPS-ACLSR 110 (263)
T ss_dssp TTCSEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG-GTTC--SSCCEEECCSSCCSC-CTT--CCC-SSCCE
T ss_pred CcCcEEECcCCCcc-cch--HHhhCCCCCEEECCCCccCCChh-hccC--CCCCEEECCCCccCC-cCc--ccc-CcccE
Confidence 35667777777776 454 36777777777777777776544 5555 567777777777774 553 233 77777
Q ss_pred eeccccccccCCchhhcCCCCCCeEeccCCcccccCCccCCCCCcEEEeecCccccc
Q 044996 125 LLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQQKDLVSFNVSNNALFGS 181 (678)
Q Consensus 125 l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~l~~l~l~~N~l~g~ 181 (678)
|+|++|++++ +| .+..+++|+.|+|++|++++..+-..+++|+.|+|++|.+++.
T Consensus 111 L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~~~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 111 LFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp EECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBCGGGGGCTTCCEEECTTSCCCBC
T ss_pred EEccCCccCC-Ch-hhcCcccccEEECCCCcCCCChHHccCCCCCEEECCCCcCcch
Confidence 7777777775 33 4777777777777777777542223566777777777777664
No 364
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.32 E-value=4.7e-12 Score=127.82 Aligned_cols=125 Identities=21% Similarity=0.312 Sum_probs=107.4
Q ss_pred CCcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCcccc
Q 044996 44 RGKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLR 123 (678)
Q Consensus 44 ~~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~ 123 (678)
-.++..|+|++|.+.+ +++ +..|++|+.|+|++|++++ +|.+.. .+|+.|+|++|++++ +| . +..+++|+
T Consensus 62 l~~L~~L~L~~N~i~~-~~~--l~~l~~L~~L~L~~N~l~~-l~~~~~---~~L~~L~L~~N~l~~-~~-~-l~~l~~L~ 131 (263)
T 1xeu_A 62 FTNLKELHLSHNQISD-LSP--LKDLTKLEELSVNRNRLKN-LNGIPS---ACLSRLFLDNNELRD-TD-S-LIHLKNLE 131 (263)
T ss_dssp CTTCCEEECCSSCCCC-CGG--GTTCSSCCEEECCSSCCSC-CTTCCC---SSCCEEECCSSCCSB-SG-G-GTTCTTCC
T ss_pred CCCCCEEECCCCccCC-Chh--hccCCCCCEEECCCCccCC-cCcccc---CcccEEEccCCccCC-Ch-h-hcCccccc
Confidence 3579999999999985 443 8999999999999999998 454332 679999999999996 55 4 89999999
Q ss_pred eeeccccccccCCchhhcCCCCCCeEeccCCcccccCCc-cCCCCCcEEEeecCccccc
Q 044996 124 KLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPD-FQQKDLVSFNVSNNALFGS 181 (678)
Q Consensus 124 ~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~-~~~~~l~~l~l~~N~l~g~ 181 (678)
.|+|++|++++. | .+..+++|+.|+|++|.+++. +. ..+.+|+.|++++|.+++.
T Consensus 132 ~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 132 ILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp EEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEECC
T ss_pred EEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcccCC
Confidence 999999999974 4 699999999999999999987 43 3678999999999999765
No 365
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.32 E-value=4.5e-12 Score=131.09 Aligned_cols=141 Identities=24% Similarity=0.388 Sum_probs=115.4
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCcccce
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRK 124 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~ 124 (678)
.++..|+|++|.+.+ ++ .+..+++|+.|+|++|++++ +|.+..+ ++|++|+|++|++++ +|+ +..+++|+.
T Consensus 85 ~~L~~L~L~~n~l~~-~~--~~~~l~~L~~L~l~~n~l~~-~~~l~~l--~~L~~L~l~~n~l~~-~~~--l~~l~~L~~ 155 (308)
T 1h6u_A 85 TKITELELSGNPLKN-VS--AIAGLQSIKTLDLTSTQITD-VTPLAGL--SNLQVLYLDLNQITN-ISP--LAGLTNLQY 155 (308)
T ss_dssp CSCCEEECCSCCCSC-CG--GGTTCTTCCEEECTTSCCCC-CGGGTTC--TTCCEEECCSSCCCC-CGG--GGGCTTCCE
T ss_pred CCCCEEEccCCcCCC-ch--hhcCCCCCCEEECCCCCCCC-chhhcCC--CCCCEEECCCCccCc-Ccc--ccCCCCccE
Confidence 578999999999985 43 48899999999999999987 4556666 789999999999995 553 789999999
Q ss_pred eeccccccccCCchhhcCCCCCCeEeccCCcccccCCccCCCCCcEEEeecCcccccCchhhhc---CCCCCCCCCC
Q 044996 125 LLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQQKDLVSFNVSNNALFGSISPALRE---LDPSSFSGNR 198 (678)
Q Consensus 125 l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~l~~l~l~~N~l~g~ip~~~~~---l~~~~~~gn~ 198 (678)
|+|++|++++ ++. +..+++|+.|+|++|.+++..+-..+.+|+.|+|++|.+++..| +.. +....+.+|+
T Consensus 156 L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~ 228 (308)
T 1h6u_A 156 LSIGNAQVSD-LTP-LANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQT 228 (308)
T ss_dssp EECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEE
T ss_pred EEccCCcCCC-Chh-hcCCCCCCEEECCCCccCcChhhcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCe
Confidence 9999999997 444 99999999999999999976554577899999999999987553 333 3334455554
No 366
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.31 E-value=6.4e-12 Score=128.83 Aligned_cols=127 Identities=20% Similarity=0.295 Sum_probs=109.1
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCcccce
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRK 124 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~ 124 (678)
.++..|+++++.+. .++ .+..+++|+.|+|++|++++..+ +..+ ++|++|+|++|++++ +| . +..+++|++
T Consensus 46 ~~L~~L~l~~~~i~-~~~--~~~~l~~L~~L~L~~n~l~~~~~-l~~l--~~L~~L~l~~n~l~~-~~-~-l~~l~~L~~ 116 (291)
T 1h6t_A 46 NSIDQIIANNSDIK-SVQ--GIQYLPNVTKLFLNGNKLTDIKP-LANL--KNLGWLFLDENKVKD-LS-S-LKDLKKLKS 116 (291)
T ss_dssp HTCCEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG-GTTC--TTCCEEECCSSCCCC-GG-G-GTTCTTCCE
T ss_pred CcccEEEccCCCcc-cCh--hHhcCCCCCEEEccCCccCCCcc-cccC--CCCCEEECCCCcCCC-Ch-h-hccCCCCCE
Confidence 46889999999987 454 38899999999999999998655 6666 789999999999995 55 3 899999999
Q ss_pred eeccccccccCCchhhcCCCCCCeEeccCCcccccCCc-cCCCCCcEEEeecCcccccCc
Q 044996 125 LLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPD-FQQKDLVSFNVSNNALFGSIS 183 (678)
Q Consensus 125 l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~-~~~~~l~~l~l~~N~l~g~ip 183 (678)
|+|++|++++. ..+..+++|+.|+|++|.+++. +. ..+++|+.|++++|.+++..|
T Consensus 117 L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 117 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp EECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred EECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh
Confidence 99999999974 5689999999999999999975 44 367899999999999987554
No 367
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.30 E-value=5.8e-12 Score=137.54 Aligned_cols=136 Identities=18% Similarity=0.291 Sum_probs=95.9
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCcccce
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRK 124 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~ 124 (678)
.++..|+|++|.+.+ +| .++.+++|+.|+|++|++++ +|.. . .+|++|+|++|++++ +| + |+++++|+.
T Consensus 131 ~~L~~L~L~~n~l~~-lp--~~~~l~~L~~L~l~~N~l~~-lp~~--~--~~L~~L~L~~n~l~~-l~-~-~~~l~~L~~ 199 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP--ELQNSSFLKIIDVDNNSLKK-LPDL--P--PSLEFIAAGNNQLEE-LP-E-LQNLPFLTA 199 (454)
T ss_dssp TTCCEEECCSSCCSS-CC--CCTTCTTCCEEECCSSCCSC-CCCC--C--TTCCEEECCSSCCSS-CC-C-CTTCTTCCE
T ss_pred CCCCEEECcCCCCCC-Cc--ccCCCCCCCEEECCCCcCcc-cCCC--c--ccccEEECcCCcCCc-Cc-c-ccCCCCCCE
Confidence 356777777777775 66 27788888888888888876 5532 2 468888888888886 66 4 788888888
Q ss_pred eeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc-CCCCCcEEEeecCcccccCchhhhcCCCCCCCCC
Q 044996 125 LLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF-QQKDLVSFNVSNNALFGSISPALRELDPSSFSGN 197 (678)
Q Consensus 125 l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~-~~~~l~~l~l~~N~l~g~ip~~~~~l~~~~~~gn 197 (678)
|+|++|++++ +|... ++|++|++++|.++ .+|.+ .+++|+.|++++|++++ +|..+..+....+.+|
T Consensus 200 L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L~l~~N 267 (454)
T 1jl5_A 200 IYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELPELQNLPFLTTIYADNNLLKT-LPDLPPSLEALNVRDN 267 (454)
T ss_dssp EECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSSCCSS-CCSCCTTCCEEECCSS
T ss_pred EECCCCcCCc-CCCCc---CcccEEECcCCcCC-cccccCCCCCCCEEECCCCcCCc-ccccccccCEEECCCC
Confidence 8888888876 44422 47777777777777 66653 55678888888888876 5544444444444544
No 368
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.29 E-value=5e-12 Score=138.70 Aligned_cols=144 Identities=19% Similarity=0.225 Sum_probs=113.1
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCcccce
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRK 124 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~ 124 (678)
.++..|+|++|.+.+..+ +..+++|+.|+|++|.+++..+ +..+ ++|+.|+|++|++++ +++ +..+++|+.
T Consensus 243 ~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~l~~n~l~~~~~-~~~l--~~L~~L~L~~n~l~~-~~~--~~~l~~L~~ 313 (466)
T 1o6v_A 243 TNLTDLDLANNQISNLAP---LSGLTKLTELKLGANQISNISP-LAGL--TALTNLELNENQLED-ISP--ISNLKNLTY 313 (466)
T ss_dssp TTCSEEECCSSCCCCCGG---GTTCTTCSEEECCSSCCCCCGG-GTTC--TTCSEEECCSSCCSC-CGG--GGGCTTCSE
T ss_pred CCCCEEECCCCccccchh---hhcCCCCCEEECCCCccCcccc-ccCC--CccCeEEcCCCcccC-chh--hcCCCCCCE
Confidence 468899999999986543 7889999999999999998655 5555 779999999999996 443 788999999
Q ss_pred eeccccccccCCchhhcCCCCCCeEeccCCcccccCCccCCCCCcEEEeecCcccccCch-hhhcCCCCCCCCCCC
Q 044996 125 LLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQQKDLVSFNVSNNALFGSISP-ALRELDPSSFSGNRD 199 (678)
Q Consensus 125 l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~l~~l~l~~N~l~g~ip~-~~~~l~~~~~~gn~~ 199 (678)
|+|++|++++..| +..+++|+.|++++|.+++...-..+++|+.|++++|++++.+|- .+..+....+.+|++
T Consensus 314 L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~~ 387 (466)
T 1o6v_A 314 LTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAW 387 (466)
T ss_dssp EECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBCGGGTTCTTCCEEECCCEEE
T ss_pred EECcCCcCCCchh--hccCccCCEeECCCCccCCchhhccCCCCCEEeCCCCccCccchhhcCCCCCEEeccCCcc
Confidence 9999999998766 788999999999999998762224678899999999999988771 122333344556643
No 369
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.29 E-value=5.4e-12 Score=142.22 Aligned_cols=126 Identities=27% Similarity=0.409 Sum_probs=110.5
Q ss_pred CCcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCcccc
Q 044996 44 RGKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLR 123 (678)
Q Consensus 44 ~~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~ 123 (678)
..++..|+|++|.|.+ ++ .+..|++|+.|+|++|.|.+ ++.+..+ ++|+.|+|++|+|++ ++ . |..+++|+
T Consensus 86 l~~L~~L~Ls~N~l~~-l~--~l~~l~~L~~L~Ls~N~l~~-l~~l~~l--~~L~~L~Ls~N~l~~-l~-~-l~~l~~L~ 156 (605)
T 1m9s_A 86 LKNLGWLFLDENKIKD-LS--SLKDLKKLKSLSLEHNGISD-INGLVHL--PQLESLYLGNNKITD-IT-V-LSRLTKLD 156 (605)
T ss_dssp CTTCCEEECCSSCCCC-CT--TSTTCTTCCEEECTTSCCCC-CGGGGGC--TTCSEEECCSSCCCC-CG-G-GGSCTTCS
T ss_pred CCCCCEEECcCCCCCC-Ch--hhccCCCCCEEEecCCCCCC-CccccCC--CccCEEECCCCccCC-ch-h-hcccCCCC
Confidence 3578999999999985 44 48999999999999999997 5767777 789999999999996 43 3 89999999
Q ss_pred eeeccccccccCCchhhcCCCCCCeEeccCCcccccCCc-cCCCCCcEEEeecCccccc
Q 044996 124 KLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPD-FQQKDLVSFNVSNNALFGS 181 (678)
Q Consensus 124 ~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~-~~~~~l~~l~l~~N~l~g~ 181 (678)
.|+|++|.|++..| +..|++|+.|+|++|.|++. |. ..+.+|+.|+|++|.+++.
T Consensus 157 ~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 157 TLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp EEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEEECC
T ss_pred EEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcCcCC
Confidence 99999999998777 99999999999999999974 55 3678999999999999875
No 370
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.28 E-value=5.4e-13 Score=139.65 Aligned_cols=145 Identities=19% Similarity=0.240 Sum_probs=113.3
Q ss_pred CcceEEecCCcEEEEEeCCCCceeecChHHhhcC--CCCCEEEccCCcccccCCcccccCCCCccEEEcccCccccc-cC
Q 044996 36 NWNGVLCHRGKIWGLKLEDMGLQGNIDITILKEL--REMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGE-IP 112 (678)
Q Consensus 36 ~w~gv~C~~~~v~~l~l~~~~l~g~~~~~~l~~l--~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~-ip 112 (678)
.|.++.|+...+..|+|+++.+. +..+..+ +.|+.|+|++|.+.+.++.+..+ ++|++|+|++|++++. +|
T Consensus 38 ~W~~~~~~~~~~~~l~l~~~~~~----~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~--~~L~~L~L~~~~l~~~~~~ 111 (336)
T 2ast_B 38 RWYRLASDESLWQTLDLTGKNLH----PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSP--FRVQHMDLSNSVIEVSTLH 111 (336)
T ss_dssp HHHHHHTCSTTSSEEECTTCBCC----HHHHHHHHHTTCSEEECTTCEECSCCCSCCCC--BCCCEEECTTCEECHHHHH
T ss_pred HHHHHhcCchhheeeccccccCC----HHHHHhhhhccceEEEcCCccccccchhhccC--CCCCEEEccCCCcCHHHHH
Confidence 69988887666788899888776 3456666 88889999999998888876555 6789999999888876 76
Q ss_pred hhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCC-ccccc-CCcc--CCCCCcEEEeecC-ccccc-Cchhh
Q 044996 113 TDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGN-KFEGQ-IPDF--QQKDLVSFNVSNN-ALFGS-ISPAL 186 (678)
Q Consensus 113 ~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N-~l~g~-~p~~--~~~~l~~l~l~~N-~l~g~-ip~~~ 186 (678)
.. +..+++|++|+|++|.+++.+|..++.+++|++|+|++| .+++. +|.. .+++|+.|++++| .+++. ++..+
T Consensus 112 ~~-~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~ 190 (336)
T 2ast_B 112 GI-LSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAV 190 (336)
T ss_dssp HH-HTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHH
T ss_pred HH-HhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHH
Confidence 54 788889999999999888888888888889999999888 67763 5542 5678888888888 88764 45544
Q ss_pred h
Q 044996 187 R 187 (678)
Q Consensus 187 ~ 187 (678)
.
T Consensus 191 ~ 191 (336)
T 2ast_B 191 A 191 (336)
T ss_dssp H
T ss_pred H
Confidence 4
No 371
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.28 E-value=1.4e-11 Score=116.11 Aligned_cols=105 Identities=20% Similarity=0.320 Sum_probs=88.3
Q ss_pred CEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEecc
Q 044996 73 RTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLE 152 (678)
Q Consensus 73 ~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~ 152 (678)
+.+++++|.|. .+|. .+. .+|+.|+|++|+|++..|. .|.++++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 15 ~~l~~~~n~l~-~iP~--~~~-~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~ 89 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPA--GIP-TDKQRLWLNNNQITKLEPG-VFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLN 89 (174)
T ss_dssp SEEECCSSCCS-SCCS--CCC-TTCSEEECCSSCCCCCCTT-TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred cEEEeCCCCCC-ccCC--CcC-CCCcEEEeCCCCccccCHH-HhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECC
Confidence 68999999995 5664 122 6799999999999976564 59999999999999999998666668999999999999
Q ss_pred CCcccccCCc-c-CCCCCcEEEeecCcccccC
Q 044996 153 GNKFEGQIPD-F-QQKDLVSFNVSNNALFGSI 182 (678)
Q Consensus 153 ~N~l~g~~p~-~-~~~~l~~l~l~~N~l~g~i 182 (678)
+|+|++..+. + .+.+|+.|+|++|.|....
T Consensus 90 ~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 90 DNHLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp SSCCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred CCccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 9999966554 2 5789999999999998653
No 372
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.28 E-value=9.7e-12 Score=135.87 Aligned_cols=121 Identities=18% Similarity=0.123 Sum_probs=78.3
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCcccce
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRK 124 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~ 124 (678)
.++..|+|++|.+.+ ++ ++.+++|+.|+|++|++++. + +..+ ++|++|+|++|++.|.++ +..+++|+.
T Consensus 106 ~~L~~L~L~~N~l~~-l~---~~~l~~L~~L~l~~N~l~~l-~-l~~l--~~L~~L~l~~n~~~~~~~---~~~l~~L~~ 174 (457)
T 3bz5_A 106 TKLTYLNCDTNKLTK-LD---VSQNPLLTYLNCARNTLTEI-D-VSHN--TQLTELDCHLNKKITKLD---VTPQTQLTT 174 (457)
T ss_dssp TTCCEEECCSSCCSC-CC---CTTCTTCCEEECTTSCCSCC-C-CTTC--TTCCEEECTTCSCCCCCC---CTTCTTCCE
T ss_pred CcCCEEECCCCcCCe-ec---CCCCCcCCEEECCCCcccee-c-cccC--CcCCEEECCCCCcccccc---cccCCcCCE
Confidence 467888888888876 54 67788888888888888873 3 4444 556666666666555553 556666666
Q ss_pred eeccccccccCCchhhcCCCCCCeEeccCCcccccCCccCCCCCcEEEeecCcccc
Q 044996 125 LLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQQKDLVSFNVSNNALFG 180 (678)
Q Consensus 125 l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~l~~l~l~~N~l~g 180 (678)
|+|++|++++ +| ++.+++|+.|++++|.+++. +-..+.+|+.|++++|+|++
T Consensus 175 L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~l~~l~~L~~L~Ls~N~l~~ 226 (457)
T 3bz5_A 175 LDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL-DLNQNIQLTFLDCSSNKLTE 226 (457)
T ss_dssp EECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC-CCTTCTTCSEEECCSSCCSC
T ss_pred EECCCCccce-ec--cccCCCCCEEECcCCcCCee-ccccCCCCCEEECcCCcccc
Confidence 6666666665 44 55666666666666666543 33344556666666666655
No 373
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.26 E-value=6.7e-12 Score=131.96 Aligned_cols=143 Identities=19% Similarity=0.267 Sum_probs=115.8
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCcccce
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRK 124 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~ 124 (678)
.++..+++++|.+.+..+ +..+++|+.|+|++|.+++..+ +..+ ++|+.|+|++|.+++ ++ . +..+++|+.
T Consensus 199 ~~L~~L~l~~n~l~~~~~---~~~~~~L~~L~l~~n~l~~~~~-~~~l--~~L~~L~l~~n~l~~-~~-~-~~~l~~L~~ 269 (347)
T 4fmz_A 199 TSLHYFTAYVNQITDITP---VANMTRLNSLKIGNNKITDLSP-LANL--SQLTWLEIGTNQISD-IN-A-VKDLTKLKM 269 (347)
T ss_dssp TTCCEEECCSSCCCCCGG---GGGCTTCCEEECCSSCCCCCGG-GTTC--TTCCEEECCSSCCCC-CG-G-GTTCTTCCE
T ss_pred CccceeecccCCCCCCch---hhcCCcCCEEEccCCccCCCcc-hhcC--CCCCEEECCCCccCC-Ch-h-HhcCCCcCE
Confidence 468889999998885432 7889999999999999987554 5555 779999999999985 54 3 889999999
Q ss_pred eeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccccCc-hhhhcCCCCCCCCCC
Q 044996 125 LLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGSIS-PALRELDPSSFSGNR 198 (678)
Q Consensus 125 l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ip-~~~~~l~~~~~~gn~ 198 (678)
|+|++|.+++. ..+..+++|+.|+|++|.+++..|.. .+++|+.|++++|.+++..| ..+.++...++.+|+
T Consensus 270 L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 270 LNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFANQV 344 (347)
T ss_dssp EECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGGGGGCTTCSEESSSCC-
T ss_pred EEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccChhhhhccceeehhhhc
Confidence 99999999874 45889999999999999999877763 67899999999999998776 234455555666664
No 374
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.26 E-value=1.1e-11 Score=135.88 Aligned_cols=141 Identities=27% Similarity=0.326 Sum_probs=117.1
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCcccce
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRK 124 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~ 124 (678)
.++..|+|++|.+.+ ++ .+..+++|+.|+|++|.+.+..| +..+ ++|+.|+|++|.+++ +|+ +..+++|+.
T Consensus 221 ~~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~l~~n~l~~~~~-~~~l--~~L~~L~l~~n~l~~-~~~--~~~l~~L~~ 291 (466)
T 1o6v_A 221 TNLDELSLNGNQLKD-IG--TLASLTNLTDLDLANNQISNLAP-LSGL--TKLTELKLGANQISN-ISP--LAGLTALTN 291 (466)
T ss_dssp TTCCEEECCSSCCCC-CG--GGGGCTTCSEEECCSSCCCCCGG-GTTC--TTCSEEECCSSCCCC-CGG--GTTCTTCSE
T ss_pred CCCCEEECCCCCccc-ch--hhhcCCCCCEEECCCCccccchh-hhcC--CCCCEEECCCCccCc-ccc--ccCCCccCe
Confidence 468899999999885 43 48899999999999999998766 5556 789999999999996 443 789999999
Q ss_pred eeccccccccCCchhhcCCCCCCeEeccCCcccccCCccCCCCCcEEEeecCcccccCchhhhc---CCCCCCCCCC
Q 044996 125 LLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQQKDLVSFNVSNNALFGSISPALRE---LDPSSFSGNR 198 (678)
Q Consensus 125 l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~l~~l~l~~N~l~g~ip~~~~~---l~~~~~~gn~ 198 (678)
|+|++|++++..| +..+++|+.|+|++|.+++..|-..+++|+.|++++|.+++. + .+.. +....+.+|.
T Consensus 292 L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~ 364 (466)
T 1o6v_A 292 LELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV-S-SLANLTNINWLSAGHNQ 364 (466)
T ss_dssp EECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSC
T ss_pred EEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCCc-h-hhccCCCCCEEeCCCCc
Confidence 9999999998555 889999999999999999988866889999999999999885 2 3433 3334455553
No 375
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.25 E-value=9.5e-12 Score=117.39 Aligned_cols=113 Identities=19% Similarity=0.204 Sum_probs=94.1
Q ss_pred hhcCCCCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCC
Q 044996 66 LKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSR 145 (678)
Q Consensus 66 l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~ 145 (678)
+..+.+|+.|+|++|+++. +|.+..+. ++|++|+|++|+|++ ++ . |..+++|++|+|++|++++..|..+..+++
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~~~~~~-~~L~~L~Ls~N~l~~-~~-~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IENLGATL-DQFDAIDFSDNEIRK-LD-G-FPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCCGGGGT-TCCSEEECCSSCCCE-EC-C-CCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred cCCcCCceEEEeeCCCCch-hHHhhhcC-CCCCEEECCCCCCCc-cc-c-cccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 5568899999999999995 57665552 379999999999996 43 4 899999999999999999765565699999
Q ss_pred CCeEeccCCcccccCCc---c-CCCCCcEEEeecCcccccCchh
Q 044996 146 LVELRLEGNKFEGQIPD---F-QQKDLVSFNVSNNALFGSISPA 185 (678)
Q Consensus 146 L~~l~l~~N~l~g~~p~---~-~~~~l~~l~l~~N~l~g~ip~~ 185 (678)
|++|+|++|.|+ .+|. . .+++|+.|++++|.++ .+|..
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~ 131 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHY 131 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhH
Confidence 999999999995 5664 2 5679999999999997 45653
No 376
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.25 E-value=1.3e-11 Score=129.70 Aligned_cols=142 Identities=19% Similarity=0.283 Sum_probs=118.3
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCcccce
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRK 124 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~ 124 (678)
.++..|+|++|.+.+ ++. +..+++|+.|++++|.+.+..+ +..+ ++|+.|+|++|++++ +|+ +..+++|+.
T Consensus 177 ~~L~~L~l~~n~l~~-~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~~--~~L~~L~l~~n~l~~-~~~--~~~l~~L~~ 247 (347)
T 4fmz_A 177 TDLYSLSLNYNQIED-ISP--LASLTSLHYFTAYVNQITDITP-VANM--TRLNSLKIGNNKITD-LSP--LANLSQLTW 247 (347)
T ss_dssp TTCSEEECTTSCCCC-CGG--GGGCTTCCEEECCSSCCCCCGG-GGGC--TTCCEEECCSSCCCC-CGG--GTTCTTCCE
T ss_pred CCCCEEEccCCcccc-ccc--ccCCCccceeecccCCCCCCch-hhcC--CcCCEEEccCCccCC-Ccc--hhcCCCCCE
Confidence 468899999999874 443 8899999999999999987655 5555 779999999999995 553 789999999
Q ss_pred eeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc-CCCCCcEEEeecCcccccCchhhhcCC---CCCCCCCC
Q 044996 125 LLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF-QQKDLVSFNVSNNALFGSISPALRELD---PSSFSGNR 198 (678)
Q Consensus 125 l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~-~~~~l~~l~l~~N~l~g~ip~~~~~l~---~~~~~gn~ 198 (678)
|+|++|.+++. ..+..+++|++|+|++|.+++. |.. ...+|+.|++++|.+++..|..+..+. ...+.+|+
T Consensus 248 L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~ 322 (347)
T 4fmz_A 248 LEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNH 322 (347)
T ss_dssp EECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSS
T ss_pred EECCCCccCCC--hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCc
Confidence 99999999873 4689999999999999999864 543 678999999999999998887766543 44567775
No 377
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.23 E-value=1.7e-11 Score=129.01 Aligned_cols=106 Identities=26% Similarity=0.337 Sum_probs=65.7
Q ss_pred CCcceEEecCCcEEEEEeCCC-CceeecChHHhhcCCCCCEEEccC-CcccccCCc-ccccCCCCccEEEcccCcccccc
Q 044996 35 ANWNGVLCHRGKIWGLKLEDM-GLQGNIDITILKELREMRTLSLMR-NNLEGPMPD-LRQLGNGALRSVYLSNNRFSGEI 111 (678)
Q Consensus 35 ~~w~gv~C~~~~v~~l~l~~~-~l~g~~~~~~l~~l~~L~~L~Ls~-N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~i 111 (678)
|.|..|.|+ ++ +|. .||. |..+++|+.|+|++ |+|.+..|. +..+ .+|+.|+|++|+|+|..
T Consensus 8 C~~~~v~~~----------~~n~l~-~ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l--~~L~~L~l~~N~l~~~~ 72 (347)
T 2ifg_A 8 HGSSGLRCT----------RDGALD-SLHH--LPGAENLTELYIENQQHLQHLELRDLRGL--GELRNLTIVKSGLRFVA 72 (347)
T ss_dssp SSSSCEECC----------SSCCCT-TTTT--SCSCSCCSEEECCSCSSCCEECGGGSCSC--CCCSEEECCSSCCCEEC
T ss_pred ccCCEEEcC----------CCCCCC-ccCC--CCCCCCeeEEEccCCCCCCCcChhHhccc--cCCCEEECCCCccceeC
Confidence 467777774 33 455 3664 66777777777775 777766552 4444 55777777777777544
Q ss_pred ChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCccc
Q 044996 112 PTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFE 157 (678)
Q Consensus 112 p~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~ 157 (678)
| ..|.+|++|+.|+|++|+|++..|..+..+. |+.|+|.+|.|.
T Consensus 73 ~-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 73 P-DAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp T-TGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred H-HHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 4 3467777777777777777654444444443 666666666655
No 378
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.23 E-value=3.8e-11 Score=120.92 Aligned_cols=137 Identities=12% Similarity=0.039 Sum_probs=106.4
Q ss_pred cccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccC-CCCccceeEEEEeCCceEEEEeccCCCCHH
Q 044996 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLR-HPNLLPLVAYYYRKEEKLLVHEFVPKRSLA 453 (678)
Q Consensus 375 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~Ey~~~gsL~ 453 (678)
..++.|+++.||++... +..+++|............+.+|+++++.+. |..+.++++++...+..|+||||+++.+|.
T Consensus 20 ~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 98 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCS 98 (263)
T ss_dssp ECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHH
T ss_pred eeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehh
Confidence 45677888999999754 6789999886532233346889999999885 677889999998888999999999999998
Q ss_pred HHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhC-------------------------------------------
Q 044996 454 VNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYREL------------------------------------------- 490 (678)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------------------------------------------- 490 (678)
+.+. +......++.+++++|+.||.--
T Consensus 99 ~~~~----------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (263)
T 3tm0_A 99 EEYE----------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPR 168 (263)
T ss_dssp HHCC----------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHH
T ss_pred hccC----------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHH
Confidence 7531 11234578999999999999810
Q ss_pred ------------CCCCCcccCCCCCCEEecCCCceEEeecCCcc
Q 044996 491 ------------PSLIAPHGHIKSSNVLLNESLEPVLADYGLIP 522 (678)
Q Consensus 491 ------------~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 522 (678)
.+..++|+|+++.|||++++..+.|+||+.+.
T Consensus 169 ~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 169 ELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 11358899999999999877667899998753
No 379
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.21 E-value=5.5e-12 Score=142.42 Aligned_cols=144 Identities=24% Similarity=0.377 Sum_probs=107.5
Q ss_pred CCCCCCCCCCCCCCCCCcceEE--------ecCCcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCcccc
Q 044996 20 LANWDDRTPPCNENGANWNGVL--------CHRGKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQ 91 (678)
Q Consensus 20 l~~W~~~~~~c~~~~~~w~gv~--------C~~~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~ 91 (678)
+..|....++| .|.|.. |....+..|+|++++|. .+|... . ++|+.|+|++|+|+. +|. .
T Consensus 12 w~~W~~~~~~~-----~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l-~--~~L~~L~L~~N~l~~-lp~--~ 79 (622)
T 3g06_A 12 WSAWRRAAPAE-----ESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCL-P--AHITTLVIPDNNLTS-LPA--L 79 (622)
T ss_dssp HHHHHHTCCGG-----GHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCC-C--TTCSEEEECSCCCSC-CCC--C
T ss_pred HHHHHhcCCcc-----hhccccccCcccccccCCCCcEEEecCCCcC-ccChhh-C--CCCcEEEecCCCCCC-CCC--c
Confidence 45676666666 587643 33346889999999998 887643 2 789999999999984 664 3
Q ss_pred cCCCCccEEEcccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCccCCCCCcEE
Q 044996 92 LGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDFQQKDLVSF 171 (678)
Q Consensus 92 ~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~l~~l 171 (678)
+ ++|++|+|++|+|+ .||. .+++|++|+|++|++++ +|. .+++|+.|+|++|+|++ +|.. .++|++|
T Consensus 80 l--~~L~~L~Ls~N~l~-~lp~----~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~-l~~L~~L 146 (622)
T 3g06_A 80 P--PELRTLEVSGNQLT-SLPV----LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL-PPGLQEL 146 (622)
T ss_dssp C--TTCCEEEECSCCCS-CCCC----CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC-CTTCCEE
T ss_pred C--CCCCEEEcCCCcCC-cCCC----CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC-CCCCCEE
Confidence 3 67999999999998 5885 57889999999999986 554 56788888888888885 5553 4778888
Q ss_pred EeecCcccccCchhhhcC
Q 044996 172 NVSNNALFGSISPALREL 189 (678)
Q Consensus 172 ~l~~N~l~g~ip~~~~~l 189 (678)
+|++|++++ +|..+.++
T Consensus 147 ~Ls~N~l~~-l~~~~~~L 163 (622)
T 3g06_A 147 SVSDNQLAS-LPALPSEL 163 (622)
T ss_dssp ECCSSCCSC-CCCCCTTC
T ss_pred ECcCCcCCC-cCCccCCC
Confidence 888888875 34333333
No 380
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.21 E-value=3.3e-11 Score=131.56 Aligned_cols=100 Identities=26% Similarity=0.411 Sum_probs=50.8
Q ss_pred CCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEe
Q 044996 71 EMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELR 150 (678)
Q Consensus 71 ~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~ 150 (678)
+|+.|+|++|++++ +|++..+ ++|++|+|++|++++ +|.. ..+|++|+|++|++++ +| .++++++|++|+
T Consensus 132 ~L~~L~L~~n~l~~-lp~~~~l--~~L~~L~l~~N~l~~-lp~~----~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~ 201 (454)
T 1jl5_A 132 LLEYLGVSNNQLEK-LPELQNS--SFLKIIDVDNNSLKK-LPDL----PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIY 201 (454)
T ss_dssp TCCEEECCSSCCSS-CCCCTTC--TTCCEEECCSSCCSC-CCCC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEE
T ss_pred CCCEEECcCCCCCC-CcccCCC--CCCCEEECCCCcCcc-cCCC----cccccEEECcCCcCCc-Cc-cccCCCCCCEEE
Confidence 44445555554444 4443333 445555555555553 4422 1355555555555554 44 355566666666
Q ss_pred ccCCcccccCCccCCCCCcEEEeecCcccccCc
Q 044996 151 LEGNKFEGQIPDFQQKDLVSFNVSNNALFGSIS 183 (678)
Q Consensus 151 l~~N~l~g~~p~~~~~~l~~l~l~~N~l~g~ip 183 (678)
+++|.+++ +|... .+|+.|++++|.++ .+|
T Consensus 202 l~~N~l~~-l~~~~-~~L~~L~l~~n~l~-~lp 231 (454)
T 1jl5_A 202 ADNNSLKK-LPDLP-LSLESIVAGNNILE-ELP 231 (454)
T ss_dssp CCSSCCSS-CCCCC-TTCCEEECCSSCCS-SCC
T ss_pred CCCCcCCc-CCCCc-CcccEEECcCCcCC-ccc
Confidence 66666554 33321 35666666666665 455
No 381
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.19 E-value=2.6e-11 Score=127.82 Aligned_cols=145 Identities=15% Similarity=0.157 Sum_probs=110.0
Q ss_pred CCcceEEecC-----------CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc--ccccCCCCcc-EE
Q 044996 35 ANWNGVLCHR-----------GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD--LRQLGNGALR-SV 100 (678)
Q Consensus 35 ~~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~--~~~~~~~~L~-~L 100 (678)
|.|..|.|++ ..++.|+|++|.|+ .||+..|.+|++|+.|+|++|++.+.+|. +..+ ++|+ .+
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L--~~l~~~l 85 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNL--PKLHEIR 85 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSC--TTCCEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcc--hhhhhhh
Confidence 5788999963 24788999999998 78877789999999999999999887774 3344 4444 57
Q ss_pred EcccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc----CCCCCcEEEeecC
Q 044996 101 YLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF----QQKDLVSFNVSNN 176 (678)
Q Consensus 101 ~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~----~~~~l~~l~l~~N 176 (678)
+++.|+++ .||++.|.++++|++|+|++|++++..+..+....++..|++.+|.-...+|.. ....++.|+|++|
T Consensus 86 ~~~~N~l~-~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N 164 (350)
T 4ay9_X 86 IEKANNLL-YINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKN 164 (350)
T ss_dssp EEEETTCC-EECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSS
T ss_pred cccCCccc-ccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccc
Confidence 77789998 566666899999999999999998777777777778888888765444455542 2245778888888
Q ss_pred cccccCch
Q 044996 177 ALFGSISP 184 (678)
Q Consensus 177 ~l~g~ip~ 184 (678)
+|+. ||.
T Consensus 165 ~i~~-i~~ 171 (350)
T 4ay9_X 165 GIQE-IHN 171 (350)
T ss_dssp CCCE-ECT
T ss_pred cccC-CCh
Confidence 8864 443
No 382
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.18 E-value=4.5e-12 Score=135.48 Aligned_cols=152 Identities=24% Similarity=0.319 Sum_probs=120.9
Q ss_pred CCcEEEEEeCCCCceeecC---hHHhhcC---------CCCCEEEccCCccc-ccCCc----ccccCCCCccEEEcccCc
Q 044996 44 RGKIWGLKLEDMGLQGNID---ITILKEL---------REMRTLSLMRNNLE-GPMPD----LRQLGNGALRSVYLSNNR 106 (678)
Q Consensus 44 ~~~v~~l~l~~~~l~g~~~---~~~l~~l---------~~L~~L~Ls~N~l~-g~~p~----~~~~~~~~L~~L~Ls~N~ 106 (678)
..++..|+|++|.+.+..+ ...+..+ ++|+.|+|++|+++ +.+|. +..+ ++|+.|+|++|+
T Consensus 121 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~--~~L~~L~L~~n~ 198 (386)
T 2ca6_A 121 HTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSH--RLLHTVKMVQNG 198 (386)
T ss_dssp CTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHC--TTCCEEECCSSC
T ss_pred CCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhC--CCcCEEECcCCC
Confidence 4689999999999974322 2345666 99999999999998 55552 3344 679999999999
Q ss_pred cc--c---ccChhhhcCCcccceeeccccccc----cCCchhhcCCCCCCeEeccCCccccc----CCcc----CCCCCc
Q 044996 107 FS--G---EIPTDAFDGMTSLRKLLLADNQFN----GPIPESLTRLSRLVELRLEGNKFEGQ----IPDF----QQKDLV 169 (678)
Q Consensus 107 l~--G---~ip~~~~~~l~~L~~l~l~~N~~~----g~~p~~~~~l~~L~~l~l~~N~l~g~----~p~~----~~~~l~ 169 (678)
++ | .+|.. +..+++|+.|+|++|.++ +.+|..+..+++|+.|+|++|.+++. +|.. ..++|+
T Consensus 199 l~~~g~~~l~~~~-l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~ 277 (386)
T 2ca6_A 199 IRPEGIEHLLLEG-LAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQ 277 (386)
T ss_dssp CCHHHHHHHHHTT-GGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCC
T ss_pred CCHhHHHHHHHHH-hhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeE
Confidence 98 3 34423 789999999999999997 78999999999999999999999876 4442 378999
Q ss_pred EEEeecCcccc----cCchhh----hcCCCCCCCCCC
Q 044996 170 SFNVSNNALFG----SISPAL----RELDPSSFSGNR 198 (678)
Q Consensus 170 ~l~l~~N~l~g----~ip~~~----~~l~~~~~~gn~ 198 (678)
.|+|++|.+++ .+|..+ .+|....+.+|+
T Consensus 278 ~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~ 314 (386)
T 2ca6_A 278 TLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNR 314 (386)
T ss_dssp EEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSB
T ss_pred EEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCc
Confidence 99999999998 588765 445556677775
No 383
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.17 E-value=3e-12 Score=136.81 Aligned_cols=154 Identities=21% Similarity=0.269 Sum_probs=118.3
Q ss_pred CCcEEEEEeCCCCcee----ecChHHhhcCCCCCEEEccCCcccccCCc-----cccc-------CCCCccEEEcccCcc
Q 044996 44 RGKIWGLKLEDMGLQG----NIDITILKELREMRTLSLMRNNLEGPMPD-----LRQL-------GNGALRSVYLSNNRF 107 (678)
Q Consensus 44 ~~~v~~l~l~~~~l~g----~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-----~~~~-------~~~~L~~L~Ls~N~l 107 (678)
..++..|+|++|.+.+ .++. .+..+++|+.|+|++|.+.+..+. +..+ ..++|++|+|++|++
T Consensus 93 ~~~L~~L~Ls~n~l~~~~~~~l~~-~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l 171 (386)
T 2ca6_A 93 CPKLHTVRLSDNAFGPTAQEPLID-FLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRL 171 (386)
T ss_dssp CTTCCEEECCSCCCCTTTHHHHHH-HHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCC
T ss_pred CCcccEEECCCCcCCHHHHHHHHH-HHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCC
Confidence 3679999999999987 3553 588999999999999999754331 1111 004699999999999
Q ss_pred c-cccCh--hhhcCCcccceeeccccccc--c---CCchhhcCCCCCCeEeccCCccc----ccCCcc--CCCCCcEEEe
Q 044996 108 S-GEIPT--DAFDGMTSLRKLLLADNQFN--G---PIPESLTRLSRLVELRLEGNKFE----GQIPDF--QQKDLVSFNV 173 (678)
Q Consensus 108 ~-G~ip~--~~~~~l~~L~~l~l~~N~~~--g---~~p~~~~~l~~L~~l~l~~N~l~----g~~p~~--~~~~l~~l~l 173 (678)
+ +.+|. ..+..+++|+.|+|++|+++ | .+|..+..+++|+.|+|++|.|+ +.+|.. .+++|+.|+|
T Consensus 172 ~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L 251 (386)
T 2ca6_A 172 ENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGL 251 (386)
T ss_dssp TGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEEC
T ss_pred CcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEEC
Confidence 8 56663 23778999999999999998 4 45558899999999999999997 667653 5679999999
Q ss_pred ecCccccc----Cchhh-----hcCCCCCCCCCC
Q 044996 174 SNNALFGS----ISPAL-----RELDPSSFSGNR 198 (678)
Q Consensus 174 ~~N~l~g~----ip~~~-----~~l~~~~~~gn~ 198 (678)
++|.+++. +|..+ .++....+.+|.
T Consensus 252 ~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~ 285 (386)
T 2ca6_A 252 NDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNE 285 (386)
T ss_dssp TTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSC
T ss_pred CCCCCchhhHHHHHHHHhhccCCCeEEEECcCCc
Confidence 99999876 56554 234444566663
No 384
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.17 E-value=5.1e-11 Score=125.29 Aligned_cols=104 Identities=23% Similarity=0.303 Sum_probs=87.9
Q ss_pred EEEccCC-cccccCCcccccCCCCccEEEccc-CccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEec
Q 044996 74 TLSLMRN-NLEGPMPDLRQLGNGALRSVYLSN-NRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRL 151 (678)
Q Consensus 74 ~L~Ls~N-~l~g~~p~~~~~~~~~L~~L~Ls~-N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l 151 (678)
.+++++| +|++ ||.+..+ ++|+.|+|++ |+|++ +|+..|.+|++|+.|+|++|+|++..|..|.+|++|+.|+|
T Consensus 12 ~v~~~~~n~l~~-ip~l~~~--~~L~~L~l~~~n~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 87 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHHLPGA--ENLTELYIENQQHLQH-LELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNL 87 (347)
T ss_dssp CEECCSSCCCTT-TTTSCSC--SCCSEEECCSCSSCCE-ECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEEC
T ss_pred EEEcCCCCCCCc-cCCCCCC--CCeeEEEccCCCCCCC-cChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeC
Confidence 5789988 8887 5656555 6799999996 99995 55556999999999999999999999999999999999999
Q ss_pred cCCcccccCCcc-CCCCCcEEEeecCccccc
Q 044996 152 EGNKFEGQIPDF-QQKDLVSFNVSNNALFGS 181 (678)
Q Consensus 152 ~~N~l~g~~p~~-~~~~l~~l~l~~N~l~g~ 181 (678)
++|+|++..+.. ....|+.|+|++|.|...
T Consensus 88 ~~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 88 SFNALESLSWKTVQGLSLQELVLSGNPLHCS 118 (347)
T ss_dssp CSSCCSCCCSTTTCSCCCCEEECCSSCCCCC
T ss_pred CCCccceeCHHHcccCCceEEEeeCCCccCC
Confidence 999999655542 334599999999999754
No 385
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.15 E-value=5.7e-12 Score=131.81 Aligned_cols=149 Identities=19% Similarity=0.206 Sum_probs=97.4
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCccccc-CCc-ccccCCCCccEEEcccCccccccChhhhcCCccc
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGP-MPD-LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSL 122 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~-~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L 122 (678)
.++..++|+++.+.+..+. +..+++|+.|+|++|.+++. +|. +..+ ++|++|+|++|++++.+|.. ++.+++|
T Consensus 70 ~~l~~L~l~~n~l~~~~~~--~~~~~~L~~L~L~~~~l~~~~~~~~~~~~--~~L~~L~L~~~~l~~~~~~~-l~~~~~L 144 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE--HFSPFRVQHMDLSNSVIEVSTLHGILSQC--SKLQNLSLEGLRLSDPIVNT-LAKNSNL 144 (336)
T ss_dssp TTCSEEECTTCEECSCCCS--CCCCBCCCEEECTTCEECHHHHHHHHTTB--CCCSEEECTTCBCCHHHHHH-HTTCTTC
T ss_pred ccceEEEcCCccccccchh--hccCCCCCEEEccCCCcCHHHHHHHHhhC--CCCCEEeCcCcccCHHHHHH-HhcCCCC
Confidence 4577788888877766553 45677788888888877764 553 3334 56777888777777777654 6777777
Q ss_pred ceeecccc-cccc-CCchhhcCCCCCCeEeccCC-ccccc-CCcc--CCC-CCcEEEeecC--ccc-ccCchhhh---cC
Q 044996 123 RKLLLADN-QFNG-PIPESLTRLSRLVELRLEGN-KFEGQ-IPDF--QQK-DLVSFNVSNN--ALF-GSISPALR---EL 189 (678)
Q Consensus 123 ~~l~l~~N-~~~g-~~p~~~~~l~~L~~l~l~~N-~l~g~-~p~~--~~~-~l~~l~l~~N--~l~-g~ip~~~~---~l 189 (678)
++|+|++| .+++ .+|..+.++++|++|+|++| .+++. ++.. ..+ +|+.|++++| .++ +.+|..+. ++
T Consensus 145 ~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L 224 (336)
T 2ast_B 145 VRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNL 224 (336)
T ss_dssp SEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTC
T ss_pred CEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCC
Confidence 77877777 5766 36666777777777777777 77654 3432 445 7777777777 454 44554433 33
Q ss_pred CCCCCCCCC
Q 044996 190 DPSSFSGNR 198 (678)
Q Consensus 190 ~~~~~~gn~ 198 (678)
....+.+|.
T Consensus 225 ~~L~l~~~~ 233 (336)
T 2ast_B 225 VHLDLSDSV 233 (336)
T ss_dssp SEEECTTCT
T ss_pred CEEeCCCCC
Confidence 333444443
No 386
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.11 E-value=1.1e-10 Score=131.64 Aligned_cols=112 Identities=28% Similarity=0.489 Sum_probs=71.7
Q ss_pred CCCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeE
Q 044996 70 REMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVEL 149 (678)
Q Consensus 70 ~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l 149 (678)
++|+.|+|++|+|++ +|.. + ++|+.|+|++|.++ .+|. .+++|+.|+|++|+|++ +| ..+++|+.|
T Consensus 181 ~~L~~L~Ls~N~l~~-l~~~--~--~~L~~L~L~~N~l~-~l~~----~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L 246 (622)
T 3g06_A 181 SGLQELSVSDNQLAS-LPTL--P--SELYKLWAYNNRLT-SLPA----LPSGLKELIVSGNRLTS-LP---VLPSELKEL 246 (622)
T ss_dssp TTCCEEECCSSCCSC-CCCC--C--TTCCEEECCSSCCS-SCCC----CCTTCCEEECCSSCCSC-CC---CCCTTCCEE
T ss_pred CCCcEEECCCCCCCC-CCCc--c--chhhEEECcCCccc-ccCC----CCCCCCEEEccCCccCc-CC---CCCCcCcEE
Confidence 666667777776665 3321 1 34666666666665 4542 23677777888887775 55 455777888
Q ss_pred eccCCcccccCCccCCCCCcEEEeecCcccccCchhhhcCCC---CCCCCCC
Q 044996 150 RLEGNKFEGQIPDFQQKDLVSFNVSNNALFGSISPALRELDP---SSFSGNR 198 (678)
Q Consensus 150 ~l~~N~l~g~~p~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~---~~~~gn~ 198 (678)
+|++|.|+ .+|. ...+|+.|+|++|+|+ .||..+.++.. ..+.+|+
T Consensus 247 ~Ls~N~L~-~lp~-~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~ 295 (622)
T 3g06_A 247 MVSGNRLT-SLPM-LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNP 295 (622)
T ss_dssp ECCSSCCS-CCCC-CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCC
T ss_pred ECCCCCCC-cCCc-ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCC
Confidence 88888777 4555 5667778888888777 67766655443 3455664
No 387
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.08 E-value=3.8e-11 Score=127.07 Aligned_cols=139 Identities=21% Similarity=0.237 Sum_probs=76.7
Q ss_pred cEEEEEeCCCCceeecCh----HHhhcCC-CCCEEEccCCcccccCCc-cccc--C-CCCccEEEcccCccccccChhh-
Q 044996 46 KIWGLKLEDMGLQGNIDI----TILKELR-EMRTLSLMRNNLEGPMPD-LRQL--G-NGALRSVYLSNNRFSGEIPTDA- 115 (678)
Q Consensus 46 ~v~~l~l~~~~l~g~~~~----~~l~~l~-~L~~L~Ls~N~l~g~~p~-~~~~--~-~~~L~~L~Ls~N~l~G~ip~~~- 115 (678)
.++.|+|++|.+++ ++. ..+..++ +|+.|+|++|.+++..+. +..+ . ..+|++|+|++|++++..+..+
T Consensus 23 ~L~~L~Ls~n~l~~-~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 23 GVTSLDLSLNNLYS-ISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TCCEEECTTSCGGG-SCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CceEEEccCCCCCh-HHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 36667777766653 222 3455666 677777777766665441 1111 0 1456677777777665444321
Q ss_pred --hcCC-cccceeeccccccccCCchhhcC-----CCCCCeEeccCCcccccCCc----c--CC-CCCcEEEeecCcccc
Q 044996 116 --FDGM-TSLRKLLLADNQFNGPIPESLTR-----LSRLVELRLEGNKFEGQIPD----F--QQ-KDLVSFNVSNNALFG 180 (678)
Q Consensus 116 --~~~l-~~L~~l~l~~N~~~g~~p~~~~~-----l~~L~~l~l~~N~l~g~~p~----~--~~-~~l~~l~l~~N~l~g 180 (678)
+..+ ++|+.|+|++|++++..+..+.. .++|++|+|++|.|++..+. . .. .+|+.|+|++|++++
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~ 181 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLAS 181 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCch
Confidence 2223 56777777777766655544332 24677777777766643221 1 12 366777777777666
Q ss_pred cCchh
Q 044996 181 SISPA 185 (678)
Q Consensus 181 ~ip~~ 185 (678)
..+..
T Consensus 182 ~~~~~ 186 (362)
T 3goz_A 182 KNCAE 186 (362)
T ss_dssp SCHHH
T ss_pred hhHHH
Confidence 55543
No 388
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.08 E-value=6.1e-11 Score=125.54 Aligned_cols=133 Identities=21% Similarity=0.192 Sum_probs=77.4
Q ss_pred cEEEEEeCCCCceeecChHHhhcC-----CCCCEEEccCCcccccCCc-----ccccCCCCccEEEcccCccccccChhh
Q 044996 46 KIWGLKLEDMGLQGNIDITILKEL-----REMRTLSLMRNNLEGPMPD-----LRQLGNGALRSVYLSNNRFSGEIPTDA 115 (678)
Q Consensus 46 ~v~~l~l~~~~l~g~~~~~~l~~l-----~~L~~L~Ls~N~l~g~~p~-----~~~~~~~~L~~L~Ls~N~l~G~ip~~~ 115 (678)
++..|+|++|.+.+..+. .+..+ ++|+.|+|++|.+++..+. +..+ .++|+.|+|++|+|++..+..+
T Consensus 52 ~L~~L~Ls~N~l~~~~~~-~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~-~~~L~~L~Ls~N~l~~~~~~~l 129 (362)
T 3goz_A 52 SVTSLNLSGNSLGFKNSD-ELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAI-PFTITVLDLGWNDFSSKSSSEF 129 (362)
T ss_dssp TCCEEECCSSCGGGSCHH-HHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTS-CTTCCEEECCSSCGGGSCHHHH
T ss_pred ceeEEECcCCCCCHHHHH-HHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhC-CCCccEEECcCCcCCcHHHHHH
Confidence 577777777777644332 23333 6777777777777665542 1111 0357777777777764333221
Q ss_pred ---hcC-CcccceeeccccccccCC----chhhcCCC-CCCeEeccCCcccccCCcc------CC-CCCcEEEeecCccc
Q 044996 116 ---FDG-MTSLRKLLLADNQFNGPI----PESLTRLS-RLVELRLEGNKFEGQIPDF------QQ-KDLVSFNVSNNALF 179 (678)
Q Consensus 116 ---~~~-l~~L~~l~l~~N~~~g~~----p~~~~~l~-~L~~l~l~~N~l~g~~p~~------~~-~~l~~l~l~~N~l~ 179 (678)
+.. .++|++|+|++|.+++.. +..+..++ +|++|+|++|.+++..+.. .. ++|+.|+|++|.++
T Consensus 130 ~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~ 209 (362)
T 3goz_A 130 KQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLG 209 (362)
T ss_dssp HHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGG
T ss_pred HHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCC
Confidence 222 257777777777776533 33344554 7777777777776555431 22 46777777777776
Q ss_pred c
Q 044996 180 G 180 (678)
Q Consensus 180 g 180 (678)
+
T Consensus 210 ~ 210 (362)
T 3goz_A 210 L 210 (362)
T ss_dssp G
T ss_pred h
Confidence 5
No 389
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.07 E-value=1.8e-10 Score=115.54 Aligned_cols=129 Identities=17% Similarity=0.148 Sum_probs=96.0
Q ss_pred CccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccCCCC--ccceeEEEEeCCceEEEEeccCCCCHHHH
Q 044996 378 GSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPN--LLPLVAYYYRKEEKLLVHEFVPKRSLAVN 455 (678)
Q Consensus 378 g~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~~~~~~~~~~~lv~Ey~~~gsL~~~ 455 (678)
+.|..+.||++...+|..+++|..... ....+.+|+++++.+.+.+ +.+++++....+..++||||+++.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence 355669999998777888999987653 2346788999999886545 456888888777899999999998873
Q ss_pred hhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhC---------------------------------------------
Q 044996 456 LHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYREL--------------------------------------------- 490 (678)
Q Consensus 456 l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--------------------------------------------- 490 (678)
... .+ ...++.++++.|..||...
T Consensus 104 ~~~--------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (264)
T 1nd4_A 104 SSH--------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFA 172 (264)
T ss_dssp TSC--------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHH
T ss_pred cCc--------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHH
Confidence 210 11 2356777777777777531
Q ss_pred ---------CCCCCcccCCCCCCEEecCCCceEEeecCCcc
Q 044996 491 ---------PSLIAPHGHIKSSNVLLNESLEPVLADYGLIP 522 (678)
Q Consensus 491 ---------~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 522 (678)
.+..++|+|++|.|||++++..++|+||+.+.
T Consensus 173 ~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 173 RLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 01238999999999999887777899999864
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.01 E-value=4.5e-12 Score=122.10 Aligned_cols=126 Identities=25% Similarity=0.311 Sum_probs=103.6
Q ss_pred hhcCCCCCEEEccCCcccccCCc-------ccccCCCCccEEEcccCccccccChhhhcCCcccceeeccccccccCCch
Q 044996 66 LKELREMRTLSLMRNNLEGPMPD-------LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPE 138 (678)
Q Consensus 66 l~~l~~L~~L~Ls~N~l~g~~p~-------~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~ 138 (678)
+.....++.++|+.|.|+|.+|. +..+ ++|++|+|++|++++ +| . +.++++|++|+|++|.++ .+|.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l--~~L~~L~ls~n~l~~-l~-~-~~~l~~L~~L~l~~n~l~-~l~~ 87 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTL--KACKHLALSTNNIEK-IS-S-LSGMENLRILSLGRNLIK-KIEN 87 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHT--TTCSEEECSEEEESC-CC-C-HHHHTTCCEEEEEEEEEC-SCSS
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcC--CCCCEEECCCCCCcc-cc-c-cccCCCCCEEECCCCCcc-cccc
Confidence 56778899999999999999885 4444 679999999999996 88 4 899999999999999999 7898
Q ss_pred hhcCCCCCCeEeccCCcccccCCcc-CCCCCcEEEeecCcccccCc-hhhh---cCCCCCCCCCC
Q 044996 139 SLTRLSRLVELRLEGNKFEGQIPDF-QQKDLVSFNVSNNALFGSIS-PALR---ELDPSSFSGNR 198 (678)
Q Consensus 139 ~~~~l~~L~~l~l~~N~l~g~~p~~-~~~~l~~l~l~~N~l~g~ip-~~~~---~l~~~~~~gn~ 198 (678)
.+..+++|++|+|++|.+++ +|.. .+.+|+.|++++|++++..+ ..+. ++....+.+|+
T Consensus 88 ~~~~~~~L~~L~L~~N~l~~-l~~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~ 151 (198)
T 1ds9_A 88 LDAVADTLEELWISYNQIAS-LSGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp HHHHHHHCSEEEEEEEECCC-HHHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCH
T ss_pred hhhcCCcCCEEECcCCcCCc-CCccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCc
Confidence 88889999999999999997 5543 56789999999999986322 2343 34445566665
No 391
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.00 E-value=7.1e-10 Score=117.10 Aligned_cols=142 Identities=14% Similarity=0.153 Sum_probs=105.0
Q ss_pred cccCccCceeEEEEEecCCceEEEEEec--ccC-hhhHHHHHHHHHHHhccC--CCCccceeEEEEeC---CceEEEEec
Q 044996 375 EILGSGCFGSSYKASLSTGAMMVVKRFK--QMN-NVGREEFQEHMRRLGRLR--HPNLLPLVAYYYRK---EEKLLVHEF 446 (678)
Q Consensus 375 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~---~~~~lv~Ey 446 (678)
+.|+.|.++.||+....+ ..+++|+.. ... ......+.+|+++++.+. +..+.++++++.+. +..|+||||
T Consensus 44 ~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 458999999999998754 567788765 321 123457889999999997 45678899988766 458999999
Q ss_pred cCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhC------------------------------------
Q 044996 447 VPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYREL------------------------------------ 490 (678)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------------------------------------ 490 (678)
+++..+.+.. ...++..++..++.++++.|+.||...
T Consensus 123 v~G~~l~~~~-------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 123 VSGRVLWDQS-------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCCBCCCCTT-------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred cCCeecCCCc-------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 9987774311 124778888999999999999999731
Q ss_pred ------------------CCCCCcccCCCCCCEEecCCCc--eEEeecCCcccc
Q 044996 491 ------------------PSLIAPHGHIKSSNVLLNESLE--PVLADYGLIPVM 524 (678)
Q Consensus 491 ------------------~~~~ivHrdlk~~NILl~~~~~--~kl~DfGla~~~ 524 (678)
....++|+|+++.|||++.++. +.|.||+.+..-
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 0246899999999999997753 689999997653
No 392
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.97 E-value=1e-09 Score=115.56 Aligned_cols=134 Identities=16% Similarity=0.216 Sum_probs=105.6
Q ss_pred EecCCcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc-ccccCCCCccEEEcccCccccccChhhhcCC
Q 044996 41 LCHRGKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD-LRQLGNGALRSVYLSNNRFSGEIPTDAFDGM 119 (678)
Q Consensus 41 ~C~~~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l 119 (678)
.|+. + .++.++++|+ .||..+ .++|+.|+|++|+|+...+. +..+ ++|++|+|++|++.+.||..+|.++
T Consensus 8 ~C~~-~--~v~C~~~~Lt-~iP~~l---~~~l~~L~Ls~N~i~~i~~~~f~~l--~~L~~L~Ls~N~i~~~i~~~~f~~L 78 (350)
T 4ay9_X 8 HCSN-R--VFLCQESKVT-EIPSDL---PRNAIELRFVLTKLRVIQKGAFSGF--GDLEKIEISQNDVLEVIEADVFSNL 78 (350)
T ss_dssp EEET-T--EEEEESTTCC-SCCTTC---CTTCSEEEEESCCCSEECTTSSTTC--TTCCEEEEECCTTCCEECTTSBCSC
T ss_pred EeeC-C--EEEecCCCCC-ccCcCc---CCCCCEEEccCCcCCCcCHHHHcCC--CCCCEEECcCCCCCCccChhHhhcc
Confidence 4644 3 4678899998 788643 46899999999999975553 5566 7899999999999989998889999
Q ss_pred cccce-eeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc--CCCCCcEEEeecCcccccCc
Q 044996 120 TSLRK-LLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF--QQKDLVSFNVSNNALFGSIS 183 (678)
Q Consensus 120 ~~L~~-l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~~l~~l~l~~N~l~g~ip 183 (678)
++|.. +.+++|+++...|..|..+++|++|++++|.+++..+.. ...++..|++.+|.--..+|
T Consensus 79 ~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~ 145 (350)
T 4ay9_X 79 PKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIE 145 (350)
T ss_dssp TTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEEC
T ss_pred hhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcccccccccc
Confidence 98775 667789999888999999999999999999998655543 44567788887644333344
No 393
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.96 E-value=6.2e-10 Score=114.69 Aligned_cols=182 Identities=19% Similarity=0.180 Sum_probs=121.0
Q ss_pred cccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccC-CCC--ccceeEEEEeCC---ceEEEEeccC
Q 044996 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLR-HPN--LLPLVAYYYRKE---EKLLVHEFVP 448 (678)
Q Consensus 375 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-H~n--iv~l~~~~~~~~---~~~lv~Ey~~ 448 (678)
+.++.|.+..||+.. ..+++|+... ......+.+|.++|+.+. +.. +.+++.+....+ ..|+||||++
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~--~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKH--SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESS--HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCC--cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 357899999999863 4578887653 234567899999998884 333 334444433322 3489999999
Q ss_pred CCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhC--------------------------------------
Q 044996 449 KRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYREL-------------------------------------- 490 (678)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------------------------------------- 490 (678)
+.+|...... .++..++..++.++++.|+.||...
T Consensus 100 G~~l~~~~~~-------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 100 GVPLTPLLLN-------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp CEECCHHHHH-------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred CeECCccccc-------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 9888653321 3677778888888888888888610
Q ss_pred ----------------CCCCCcccCCCCCCEEecC--CCceEEeecCCccccCccccccccc----------------ee
Q 044996 491 ----------------PSLIAPHGHIKSSNVLLNE--SLEPVLADYGLIPVMNQESAQELMI----------------AY 536 (678)
Q Consensus 491 ----------------~~~~ivHrdlk~~NILl~~--~~~~kl~DfGla~~~~~~~~~~~~~----------------~y 536 (678)
....++|+|+++.||++++ +..+.|+||+.+........-.... .|
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y 252 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHY 252 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHc
Confidence 1235799999999999998 5668899999876533211000000 11
Q ss_pred --eC-ccccccCCCCCcchHHHHHHHHHHHHhCCCCcc
Q 044996 537 --KS-PEFLQLGRITKKTDVWSLGVLILEIMTGKFPAN 571 (678)
Q Consensus 537 --~a-PE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~ 571 (678)
.. |+... +.....+.|+++.++|++.+|+.+|.
T Consensus 253 ~~~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 253 KHKDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp TCSCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 11 22111 11223689999999999999998764
No 394
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.90 E-value=2.5e-10 Score=124.73 Aligned_cols=134 Identities=21% Similarity=0.233 Sum_probs=84.8
Q ss_pred cEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCccccc----CCc-ccccCCCCccEEEcccCccccccChhhhcCCc
Q 044996 46 KIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGP----MPD-LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMT 120 (678)
Q Consensus 46 ~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~----~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~ 120 (678)
+++.|+|+++.++..-....+..+++|+.|+|++|.++.. ++. +..+ ++|++|+|++|.++...+..++..+.
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~--~~L~~L~Ls~n~l~~~~~~~l~~~l~ 81 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVN--PALAELNLRSNELGDVGVHCVLQGLQ 81 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTC--TTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhC--CCcCEEeCCCCcCChHHHHHHHHHHh
Confidence 4677777777766433333466677777777777777642 232 2333 55777777777776544444344455
Q ss_pred ----ccceeecccccccc----CCchhhcCCCCCCeEeccCCcccccCCcc-------CCCCCcEEEeecCccccc
Q 044996 121 ----SLRKLLLADNQFNG----PIPESLTRLSRLVELRLEGNKFEGQIPDF-------QQKDLVSFNVSNNALFGS 181 (678)
Q Consensus 121 ----~L~~l~l~~N~~~g----~~p~~~~~l~~L~~l~l~~N~l~g~~p~~-------~~~~l~~l~l~~N~l~g~ 181 (678)
+|++|+|++|+++. .+|..+..+++|++|+|++|.+++..+.. ...+|+.|+|++|.+++.
T Consensus 82 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~ 157 (461)
T 1z7x_W 82 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAA 157 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGG
T ss_pred hCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHH
Confidence 57777777777773 55777777777777777777776543321 234677777777777653
No 395
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.85 E-value=3.1e-10 Score=123.99 Aligned_cols=151 Identities=19% Similarity=0.206 Sum_probs=91.1
Q ss_pred CcEEEEEeCCCCceee----cChHHhhcCCCCCEEEccCCccccc----CCc-ccccCCCCccEEEcccCccccccChh-
Q 044996 45 GKIWGLKLEDMGLQGN----IDITILKELREMRTLSLMRNNLEGP----MPD-LRQLGNGALRSVYLSNNRFSGEIPTD- 114 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~----~~~~~l~~l~~L~~L~Ls~N~l~g~----~p~-~~~~~~~~L~~L~Ls~N~l~G~ip~~- 114 (678)
.++..|+|++|.+.+. +.+..+..+++|+.|+|++|.+++. ++. +..+ ++|++|+|++|.+++..+..
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~--~~L~~L~Ls~n~i~~~~~~~l 304 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAK--ESLKELSLAGNELGDEGARLL 304 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHC--TTCCEEECTTCCCHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhC--CCcceEECCCCCCchHHHHHH
Confidence 4677888888877543 2222233577788888888877763 332 2233 56777777777776443322
Q ss_pred ---hhcCCcccceeeccccccccC----CchhhcCCCCCCeEeccCCcccccCCcc-------CCCCCcEEEeecCcccc
Q 044996 115 ---AFDGMTSLRKLLLADNQFNGP----IPESLTRLSRLVELRLEGNKFEGQIPDF-------QQKDLVSFNVSNNALFG 180 (678)
Q Consensus 115 ---~~~~l~~L~~l~l~~N~~~g~----~p~~~~~l~~L~~l~l~~N~l~g~~p~~-------~~~~l~~l~l~~N~l~g 180 (678)
.....++|+.|+|++|.+++. +|..+..+++|++|+|++|.+++..+.. ...+|+.|+|++|.+++
T Consensus 305 ~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~ 384 (461)
T 1z7x_W 305 CETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSD 384 (461)
T ss_dssp HHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCH
T ss_pred HHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCCh
Confidence 111235777777777777765 5666666777777777777776543321 14577777777777765
Q ss_pred ----cCchhhh---cCCCCCCCCC
Q 044996 181 ----SISPALR---ELDPSSFSGN 197 (678)
Q Consensus 181 ----~ip~~~~---~l~~~~~~gn 197 (678)
.+|..+. ++....+.+|
T Consensus 385 ~~~~~l~~~l~~~~~L~~L~l~~N 408 (461)
T 1z7x_W 385 SSCSSLAATLLANHSLRELDLSNN 408 (461)
T ss_dssp HHHHHHHHHHHHCCCCCEEECCSS
T ss_pred hhHHHHHHHHHhCCCccEEECCCC
Confidence 5665543 3333345555
No 396
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.83 E-value=4e-11 Score=119.93 Aligned_cols=143 Identities=16% Similarity=0.181 Sum_probs=87.6
Q ss_pred CcceEEecCC--cEEEEEeCC---CCceeecChHHhhcCCCCCEEEccCCcccccCC--cccccCCCCccE--EEcccCc
Q 044996 36 NWNGVLCHRG--KIWGLKLED---MGLQGNIDITILKELREMRTLSLMRNNLEGPMP--DLRQLGNGALRS--VYLSNNR 106 (678)
Q Consensus 36 ~w~gv~C~~~--~v~~l~l~~---~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p--~~~~~~~~~L~~--L~Ls~N~ 106 (678)
+|.|+.|+.. +|+.+...+ ..+.|.+.++.+..|+. .|...+|..++.++ .+... +.|.. ++++.|+
T Consensus 79 ~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~d--p~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 79 AVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSD--PDLVAQNIDVVLNR 154 (267)
T ss_dssp HTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGC--HHHHHTTCCCCTTS
T ss_pred hcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCC--cchhhcCccccCCH
Confidence 7999999743 676665555 45567777665544443 23333344433332 11111 22333 5666663
Q ss_pred ---cccccChhhhcCCcccceeecccccccc--CCchhhcCCCCCCeEeccCCcccccCCccCCC--CCcEEEeecCccc
Q 044996 107 ---FSGEIPTDAFDGMTSLRKLLLADNQFNG--PIPESLTRLSRLVELRLEGNKFEGQIPDFQQK--DLVSFNVSNNALF 179 (678)
Q Consensus 107 ---l~G~ip~~~~~~l~~L~~l~l~~N~~~g--~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~--~l~~l~l~~N~l~ 179 (678)
+.+.++. +..++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++.-.-..+. +|+.|+|++|.++
T Consensus 155 ~~~~~~~l~i-~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l~L~~L~L~~Npl~ 233 (267)
T 3rw6_A 155 RSCMAATLRI-IEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLC 233 (267)
T ss_dssp HHHHHHHHHH-HHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTSCCSEEECTTSTTG
T ss_pred HHHHHHHHHH-HHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccCCcceEEccCCcCc
Confidence 3333332 23567888888888888887 66677778888888888888888641111222 7888888888888
Q ss_pred ccCc
Q 044996 180 GSIS 183 (678)
Q Consensus 180 g~ip 183 (678)
+.+|
T Consensus 234 ~~~~ 237 (267)
T 3rw6_A 234 DTFR 237 (267)
T ss_dssp GGCS
T ss_pred cccC
Confidence 8776
No 397
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.75 E-value=7.4e-10 Score=117.35 Aligned_cols=41 Identities=27% Similarity=0.292 Sum_probs=18.0
Q ss_pred cCCcccceeeccccccccC----CchhhcCCCCCCeEeccCCccc
Q 044996 117 DGMTSLRKLLLADNQFNGP----IPESLTRLSRLVELRLEGNKFE 157 (678)
Q Consensus 117 ~~l~~L~~l~l~~N~~~g~----~p~~~~~l~~L~~l~l~~N~l~ 157 (678)
..+++|++|+|++|.++.. ++..+..+++|+.|+|++|.|+
T Consensus 180 ~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 180 AGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp HTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCC
T ss_pred hcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCC
Confidence 3344444444444444421 2333344444444444444443
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.58 E-value=2.6e-09 Score=113.19 Aligned_cols=150 Identities=17% Similarity=0.158 Sum_probs=105.2
Q ss_pred CcEEEEEeCCCCceeecChHHhh-----cCCCCCEEEccCCcccccCC-cc-cccCCCCccEEEcccCccccccChhhh-
Q 044996 45 GKIWGLKLEDMGLQGNIDITILK-----ELREMRTLSLMRNNLEGPMP-DL-RQLGNGALRSVYLSNNRFSGEIPTDAF- 116 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~-----~l~~L~~L~Ls~N~l~g~~p-~~-~~~~~~~L~~L~Ls~N~l~G~ip~~~~- 116 (678)
..+..|+|++|.++..-. ..+. ..++|+.|+|++|.++..-. .+ ..+ .+|+.|+|++|+|+..-... +
T Consensus 72 ~~L~~L~Ls~n~l~~~~~-~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L--~~L~~L~Ls~n~l~~~~~~~-L~ 147 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKC-TVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVF--LRARKLGLQLNSLGPEACKD-LR 147 (372)
T ss_dssp TTCCEEECTTSCCCHHHH-HHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHH--HTEEEEECCSSCCCHHHHHH-HH
T ss_pred hhCCEEEecCCCCCHHHH-HHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHH--HhccHhhcCCCCCCHHHHHH-HH
Confidence 468899999999874321 1222 23799999999999865311 11 123 46999999999997543222 3
Q ss_pred ----cCCcccceeecccccccc----CCchhhcCCCCCCeEeccCCcccccC----Cc--cCCCCCcEEEeecCccccc-
Q 044996 117 ----DGMTSLRKLLLADNQFNG----PIPESLTRLSRLVELRLEGNKFEGQI----PD--FQQKDLVSFNVSNNALFGS- 181 (678)
Q Consensus 117 ----~~l~~L~~l~l~~N~~~g----~~p~~~~~l~~L~~l~l~~N~l~g~~----p~--~~~~~l~~l~l~~N~l~g~- 181 (678)
...++|+.|+|++|.++. .++..+..+++|++|+|++|.|+..- +. ....+|+.|+|++|.|+..
T Consensus 148 ~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g 227 (372)
T 3un9_A 148 DLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTA 227 (372)
T ss_dssp HHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHH
T ss_pred HHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHH
Confidence 356889999999999975 35666788999999999999997532 22 1346899999999999753
Q ss_pred ---Cchhh---hcCCCCCCCCCC
Q 044996 182 ---ISPAL---RELDPSSFSGNR 198 (678)
Q Consensus 182 ---ip~~~---~~l~~~~~~gn~ 198 (678)
+...+ ..+...++.+|.
T Consensus 228 ~~~l~~~L~~~~~L~~L~Ls~N~ 250 (372)
T 3un9_A 228 ALALARAAREHPSLELLHLYFNE 250 (372)
T ss_dssp HHHHHHHHHHCSSCCEEECTTSS
T ss_pred HHHHHHHHHhCCCCCEEeccCCC
Confidence 33333 344455566663
No 399
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.58 E-value=2.3e-07 Score=96.08 Aligned_cols=133 Identities=14% Similarity=0.118 Sum_probs=97.8
Q ss_pred cccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccCC---C-CccceeEEEEeCCceEEEEeccCCC
Q 044996 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRH---P-NLLPLVAYYYRKEEKLLVHEFVPKR 450 (678)
Q Consensus 375 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H---~-niv~l~~~~~~~~~~~lv~Ey~~~g 450 (678)
+.++.|....||+. +..+++|+... ......+.+|.+++..+.+ + .+.+++++ +..++||||+++.
T Consensus 43 ~~l~~G~~n~vy~v----g~~~vlR~~~~--~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~ 112 (320)
T 3r70_A 43 RYLSSGDDSDTFLC----NEQYVVKVPKR--DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGE 112 (320)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCB
T ss_pred EeCCCCCCceEEEE----CCEEEEEeCCc--HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCc
Confidence 46899999999998 66788887643 2334568899999988876 1 23444544 5678999999998
Q ss_pred CHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCC---------------------------------------
Q 044996 451 SLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELP--------------------------------------- 491 (678)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~--------------------------------------- 491 (678)
++...... .++..++..++.++++.|+.||....
T Consensus 113 ~l~~~~~~-------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (320)
T 3r70_A 113 RITYEQYH-------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEM 185 (320)
T ss_dssp CCCHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHH
T ss_pred cccccccc-------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccc
Confidence 88643321 35666777888888888888885422
Q ss_pred --------------------CCCCcccCCCCCCEEecCCCceEEeecCCcccc
Q 044996 492 --------------------SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM 524 (678)
Q Consensus 492 --------------------~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 524 (678)
...++|+|+++.|||++++..+.|+||+.+...
T Consensus 186 ~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 186 LEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred hHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 123589999999999999766799999987543
No 400
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.53 E-value=2.6e-08 Score=112.26 Aligned_cols=112 Identities=9% Similarity=0.083 Sum_probs=55.9
Q ss_pred hhcCCCCCEEEccCCcccccCCc-ccc-cCCCCccEEEcc----cCccccc-----cChhhhcCCcccceeeccc--ccc
Q 044996 66 LKELREMRTLSLMRNNLEGPMPD-LRQ-LGNGALRSVYLS----NNRFSGE-----IPTDAFDGMTSLRKLLLAD--NQF 132 (678)
Q Consensus 66 l~~l~~L~~L~Ls~N~l~g~~p~-~~~-~~~~~L~~L~Ls----~N~l~G~-----ip~~~~~~l~~L~~l~l~~--N~~ 132 (678)
+..+++|+.|+|+.|++++..+. +.. + ++|+.|+|+ .|++++. ++. .+.++++|+.|+|++ |.+
T Consensus 374 ~~~~~~L~~L~l~~~~l~~~~~~~l~~~~--~~L~~L~l~~~~~~n~l~~~p~~~~~~~-~~~~~~~L~~L~L~~~~~~l 450 (592)
T 3ogk_B 374 AQGCQELEYMAVYVSDITNESLESIGTYL--KNLCDFRLVLLDREERITDLPLDNGVRS-LLIGCKKLRRFAFYLRQGGL 450 (592)
T ss_dssp HHHCTTCSEEEEEESCCCHHHHHHHHHHC--CSCCEEEEEECSCCSCCSSCCCHHHHHH-HHHHCTTCCEEEEECCGGGC
T ss_pred HhhCccCeEEEeecCCccHHHHHHHHhhC--CCCcEEEEeecCCCccccCchHHHHHHH-HHHhCCCCCEEEEecCCCCc
Confidence 44566666666666666554331 111 2 446666664 4555542 332 244555666666653 234
Q ss_pred ccCCchhhcC-CCCCCeEeccCCccccc-CCc--cCCCCCcEEEeecCcccc
Q 044996 133 NGPIPESLTR-LSRLVELRLEGNKFEGQ-IPD--FQQKDLVSFNVSNNALFG 180 (678)
Q Consensus 133 ~g~~p~~~~~-l~~L~~l~l~~N~l~g~-~p~--~~~~~l~~l~l~~N~l~g 180 (678)
++..+..++. +++|++|+|++|.+++. ++. ..+++|+.|+|++|.|++
T Consensus 451 ~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~ 502 (592)
T 3ogk_B 451 TDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSE 502 (592)
T ss_dssp CHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBH
T ss_pred cHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcH
Confidence 4444444432 55566666666655542 222 134555666666665543
No 401
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.46 E-value=4.2e-07 Score=92.49 Aligned_cols=141 Identities=22% Similarity=0.265 Sum_probs=92.3
Q ss_pred cccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccCCC---CccceeEEEEeCCceEEEEeccCCCC
Q 044996 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHP---NLLPLVAYYYRKEEKLLVHEFVPKRS 451 (678)
Q Consensus 375 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~~~~~~~~~~~lv~Ey~~~gs 451 (678)
+.|+.|.++.||++...+|..+++|+...........|..|++.|+.++|. .+.+++++. ..++||||++++.
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~ 96 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCC
Confidence 458999999999999888999999986543333346789999999999875 477777763 4799999999887
Q ss_pred HH-----------HHhhccCC--CCCC--------------CCChHHHH---HH-----------------HHHHHHHHH
Q 044996 452 LA-----------VNLHGHQA--LGQP--------------SLDWPSRL---KI-----------------VKGVAKGLQ 484 (678)
Q Consensus 452 L~-----------~~l~~~~~--~~~~--------------~l~~~~~~---~i-----------------~~~ia~gL~ 484 (678)
+. ..||.... .+.+ .-+|.... ++ ...+-+.++
T Consensus 97 ~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l~~ 176 (288)
T 3d1u_A 97 PTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKVLD 176 (288)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 53 12343211 0110 02343221 11 111112233
Q ss_pred HHHHh---CCCCCCcccCCCCCCEEecCCCceEEeecCCc
Q 044996 485 YLYRE---LPSLIAPHGHIKSSNVLLNESLEPVLADYGLI 521 (678)
Q Consensus 485 yLH~~---~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla 521 (678)
.+... .....++|+|+.+.|||++.+ .+.|.|| .+
T Consensus 177 ~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~ 214 (288)
T 3d1u_A 177 ALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AA 214 (288)
T ss_dssp THHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CC
T ss_pred HHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-Cc
Confidence 33322 124568999999999999884 5889999 64
No 402
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.41 E-value=2.1e-08 Score=100.22 Aligned_cols=102 Identities=22% Similarity=0.374 Sum_probs=68.0
Q ss_pred hhcCCCCCE--EEccCCc---ccccCCcc-cccCCCCccEEEcccCcccc--ccChhhhcCCcccceeeccccccccCCc
Q 044996 66 LKELREMRT--LSLMRNN---LEGPMPDL-RQLGNGALRSVYLSNNRFSG--EIPTDAFDGMTSLRKLLLADNQFNGPIP 137 (678)
Q Consensus 66 l~~l~~L~~--L~Ls~N~---l~g~~p~~-~~~~~~~L~~L~Ls~N~l~G--~ip~~~~~~l~~L~~l~l~~N~~~g~~p 137 (678)
+...+.|.. ++++.|. +.+.++.. ..+ ++|+.|+|++|+|++ .||.. +..+++|+.|+|++|+|++.
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l--~~L~~L~Ls~N~l~~l~~l~~~-~~~l~~L~~L~Ls~N~i~~~-- 211 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENI--PELLSLNLSNNRLYRLDDMSSI-VQKAPNLKILNLSGNELKSE-- 211 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHC--TTCCEEECTTSCCCCCGGGTTH-HHHSTTCCEEECTTSCCCSG--
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhC--CCCCEEECCCCCCCCCccchhH-HhhCCCCCEEECCCCccCCc--
Confidence 444444544 6677773 33322211 223 568889999999887 56643 67888999999999998875
Q ss_pred hhhcCCC--CCCeEeccCCcccccCCcc---------CCCCCcEEE
Q 044996 138 ESLTRLS--RLVELRLEGNKFEGQIPDF---------QQKDLVSFN 172 (678)
Q Consensus 138 ~~~~~l~--~L~~l~l~~N~l~g~~p~~---------~~~~l~~l~ 172 (678)
..+..+. +|++|+|++|.+.+.+|.. ...+|+.||
T Consensus 212 ~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 212 RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 3344444 8889999999998887731 345666654
No 403
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.40 E-value=2.1e-06 Score=88.20 Aligned_cols=136 Identities=17% Similarity=0.102 Sum_probs=92.3
Q ss_pred cccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccCCC---CccceeEEEE-eCCceEEEEeccCCC
Q 044996 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHP---NLLPLVAYYY-RKEEKLLVHEFVPKR 450 (678)
Q Consensus 375 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~~~~~-~~~~~~lv~Ey~~~g 450 (678)
+.++.|....||+. +..+++|+... ......+.+|.++|..+.+. .+.+++.++. ..+..++||||+++.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 34788888899988 56678887532 33456789999999999753 2556666664 345678999999998
Q ss_pred CHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhC----------------------------------------
Q 044996 451 SLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYREL---------------------------------------- 490 (678)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~---------------------------------------- 490 (678)
.+...... .++..++..++.++++.|+.||.-.
T Consensus 99 ~l~~~~~~-------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~ 171 (306)
T 3tdw_A 99 ILGEDGMA-------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY 171 (306)
T ss_dssp ECHHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred ECchhhhh-------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 87653211 1334444455555555555555311
Q ss_pred ----------------CCCCCcccCCCCCCEEecC---CCc-eEEeecCCccc
Q 044996 491 ----------------PSLIAPHGHIKSSNVLLNE---SLE-PVLADYGLIPV 523 (678)
Q Consensus 491 ----------------~~~~ivHrdlk~~NILl~~---~~~-~kl~DfGla~~ 523 (678)
.+..++|+|+++.|||++. ++. +.|+||+.+..
T Consensus 172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2335789999999999997 455 58999998644
No 404
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.40 E-value=5.1e-07 Score=93.81 Aligned_cols=130 Identities=17% Similarity=0.147 Sum_probs=94.3
Q ss_pred CcEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCccccc-------------CCccc--------------c-----c
Q 044996 45 GKIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGP-------------MPDLR--------------Q-----L 92 (678)
Q Consensus 45 ~~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~-------------~p~~~--------------~-----~ 92 (678)
..+..|+|.+ ++. .|+...|.+|++|+.|+|++|.+... +|.-. . +
T Consensus 101 ~~L~~l~L~~-~i~-~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 101 QTLEKVILSE-KIK-NIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp TTCCC-CBCT-TCC-EECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred CCCcEEECCc-ccc-chhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 4578888888 676 67777899999999999999975311 11000 0 0
Q ss_pred ---------------------------------------------CCCCccEEEcccCccccccChhhhcCCcccceeec
Q 044996 93 ---------------------------------------------GNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLL 127 (678)
Q Consensus 93 ---------------------------------------------~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l 127 (678)
...+|+.|+|++|+++ .||...|.++++|+.|+|
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l 257 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKL 257 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCC-EECTTTTTTCTTCCEEEC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcc-eecHhhhhCCCCCCEEEC
Confidence 0257888888888888 788888888889999999
Q ss_pred cccccccCCchhhcCCCCCC-eEeccCCcccccCCcc---CCCCCcEEEeecCcccc
Q 044996 128 ADNQFNGPIPESLTRLSRLV-ELRLEGNKFEGQIPDF---QQKDLVSFNVSNNALFG 180 (678)
Q Consensus 128 ~~N~~~g~~p~~~~~l~~L~-~l~l~~N~l~g~~p~~---~~~~l~~l~l~~N~l~g 180 (678)
++| ++..-+..|.+|.+|+ .++|.+ .++ .|+.. .+.+|+.+++++|+++.
T Consensus 258 ~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~-~I~~~aF~~c~~L~~l~l~~n~i~~ 311 (329)
T 3sb4_A 258 PHN-LKTIGQRVFSNCGRLAGTLELPA-SVT-AIEFGAFMGCDNLRYVLATGDKITT 311 (329)
T ss_dssp CTT-CCEECTTTTTTCTTCCEEEEECT-TCC-EECTTTTTTCTTEEEEEECSSCCCE
T ss_pred Ccc-cceehHHHhhCChhccEEEEEcc-cce-EEchhhhhCCccCCEEEeCCCccCc
Confidence 888 6655566788888898 888887 454 45432 56788888888887753
No 405
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.25 E-value=3.5e-06 Score=88.69 Aligned_cols=143 Identities=10% Similarity=0.076 Sum_probs=88.9
Q ss_pred cccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccCCCC--ccceeEEEEeC-CceEEEEeccCCCC
Q 044996 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPN--LLPLVAYYYRK-EEKLLVHEFVPKRS 451 (678)
Q Consensus 375 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~~~~~~~-~~~~lv~Ey~~~gs 451 (678)
+.++.|....+|+... ++..+++|..... ..+..|..++..+.... +.++++++... +..|+||||+++..
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~ 120 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVT 120 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEE
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCC
Confidence 4578899999999875 5778888877532 25888999999886544 45677777654 56899999998765
Q ss_pred HHH------------------HhhccCCCC--------CC----CCChHHH---------------------HHHHHHHH
Q 044996 452 LAV------------------NLHGHQALG--------QP----SLDWPSR---------------------LKIVKGVA 480 (678)
Q Consensus 452 L~~------------------~l~~~~~~~--------~~----~l~~~~~---------------------~~i~~~ia 480 (678)
+.+ .||...... .+ .-+|... ......+.
T Consensus 121 l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 200 (362)
T 3ovc_A 121 LQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQALD 200 (362)
T ss_dssp TTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHHHH
Confidence 531 112211000 00 0011111 01111122
Q ss_pred HHHHHHHHhCC-CCCCcccCCCCCCEEecCCCceEEeecCCcccc
Q 044996 481 KGLQYLYRELP-SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVM 524 (678)
Q Consensus 481 ~gL~yLH~~~~-~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 524 (678)
.-+.++ ...+ ...++|+|+.+.|||++++..+.|+||+.+..-
T Consensus 201 ~l~~~l-~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 201 ELMLWA-EDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHG-GGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHH-hhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 222233 2222 245799999999999988878889999987653
No 406
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.24 E-value=1.2e-07 Score=106.81 Aligned_cols=132 Identities=6% Similarity=-0.020 Sum_probs=70.9
Q ss_pred cEEEEEeCCCCceeecChHHhhcCCCCCEEEcc-----------CCccccc-CCc-ccccCCCCccEEEcccCccccccC
Q 044996 46 KIWGLKLEDMGLQGNIDITILKELREMRTLSLM-----------RNNLEGP-MPD-LRQLGNGALRSVYLSNNRFSGEIP 112 (678)
Q Consensus 46 ~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls-----------~N~l~g~-~p~-~~~~~~~~L~~L~Ls~N~l~G~ip 112 (678)
++..|+|. +.+........+..+++|+.|+|+ .|.+++. ++. ...+ ++|++|+|+.|++++..+
T Consensus 319 ~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~L~~L~l~~~~l~~~~~ 395 (592)
T 3ogk_B 319 NLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGC--QELEYMAVYVSDITNESL 395 (592)
T ss_dssp TCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHC--TTCSEEEEEESCCCHHHH
T ss_pred CCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhC--ccCeEEEeecCCccHHHH
Confidence 45666666 333322222344566667777776 2444432 111 1123 456777776677766655
Q ss_pred hhhhcCCcccceeecc----ccccccC-----CchhhcCCCCCCeEeccCC--cccccCCcc---CCCCCcEEEeecCcc
Q 044996 113 TDAFDGMTSLRKLLLA----DNQFNGP-----IPESLTRLSRLVELRLEGN--KFEGQIPDF---QQKDLVSFNVSNNAL 178 (678)
Q Consensus 113 ~~~~~~l~~L~~l~l~----~N~~~g~-----~p~~~~~l~~L~~l~l~~N--~l~g~~p~~---~~~~l~~l~l~~N~l 178 (678)
..+...+++|+.|+|+ .|++++. ++..+.++++|+.|+|+++ .+++..+.. ..++|+.|+|++|.+
T Consensus 396 ~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l 475 (592)
T 3ogk_B 396 ESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGE 475 (592)
T ss_dssp HHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCS
T ss_pred HHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCC
Confidence 5422236667777774 5566653 4444556667777776532 244433321 345667777777766
Q ss_pred cc
Q 044996 179 FG 180 (678)
Q Consensus 179 ~g 180 (678)
++
T Consensus 476 ~~ 477 (592)
T 3ogk_B 476 SD 477 (592)
T ss_dssp SH
T ss_pred CH
Confidence 65
No 407
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.23 E-value=5.4e-06 Score=83.27 Aligned_cols=134 Identities=20% Similarity=0.208 Sum_probs=93.1
Q ss_pred cCccCce-eEEEEEec-CCceEEEEEecccChhhHHHHHHHHHHHhccC-CCCccceeEEEEeCCceEEEEeccCCCCHH
Q 044996 377 LGSGCFG-SSYKASLS-TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLR-HPNLLPLVAYYYRKEEKLLVHEFVPKRSLA 453 (678)
Q Consensus 377 lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~Ey~~~gsL~ 453 (678)
+..|..+ .||+.... .+..+++|+... ....++.+|...|+.+. +--+.++++++.+.+..++|||++++.++.
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~ 108 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF 108 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence 4445554 68988764 356788887653 23557888999988874 333667889999889999999999998877
Q ss_pred HHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHh--------------------------------------------
Q 044996 454 VNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRE-------------------------------------------- 489 (678)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-------------------------------------------- 489 (678)
+..... ......++.+++..|.-||..
T Consensus 109 ~~~~~~---------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 109 QVLEEY---------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHHC---------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred ccccCC---------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 654321 122334555555666666521
Q ss_pred -------C---CCCCCcccCCCCCCEEecCCCceEEeecCCcc
Q 044996 490 -------L---PSLIAPHGHIKSSNVLLNESLEPVLADYGLIP 522 (678)
Q Consensus 490 -------~---~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 522 (678)
. ....++|+|+.+.|||+++++.+-|+||+.+.
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1 12237899999999999988777899998864
No 408
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.14 E-value=5.2e-07 Score=85.41 Aligned_cols=112 Identities=17% Similarity=0.264 Sum_probs=80.4
Q ss_pred HhhcCCCCCEEEccCC-ccccc----CC-cccccCCCCccEEEcccCccccc----cChhhhcCCcccceeecccccccc
Q 044996 65 ILKELREMRTLSLMRN-NLEGP----MP-DLRQLGNGALRSVYLSNNRFSGE----IPTDAFDGMTSLRKLLLADNQFNG 134 (678)
Q Consensus 65 ~l~~l~~L~~L~Ls~N-~l~g~----~p-~~~~~~~~~L~~L~Ls~N~l~G~----ip~~~~~~l~~L~~l~l~~N~~~g 134 (678)
.+...+.|+.|+|++| .+... +. .+.. +++|++|+|++|+|+.. |.. .+...++|++|+|++|.++.
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~--~~~L~~L~Ls~n~i~~~g~~~l~~-~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKT--NTYVKKFSIVGTRSNDPVAFALAE-MLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTT--CCSCCEEECTTSCCCHHHHHHHHH-HHHHCSSCCEEECCSSCCCH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHh--CCCcCEEECcCCCCChHHHHHHHH-HHHhCCCcCEEECcCCcCCH
Confidence 4677888999999998 77642 11 1222 26799999999998632 222 25566789999999999875
Q ss_pred C----CchhhcCCCCCCeEec--cCCcccccCCc------cCCCCCcEEEeecCccc
Q 044996 135 P----IPESLTRLSRLVELRL--EGNKFEGQIPD------FQQKDLVSFNVSNNALF 179 (678)
Q Consensus 135 ~----~p~~~~~l~~L~~l~l--~~N~l~g~~p~------~~~~~l~~l~l~~N~l~ 179 (678)
. +...+...++|++|+| ++|.|...--. ...++|+.|+|++|.+.
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 4 5666777889999999 88988754211 13468999999999885
No 409
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.12 E-value=4.4e-07 Score=102.23 Aligned_cols=108 Identities=7% Similarity=0.047 Sum_probs=50.5
Q ss_pred cCCCCCEEEccCCcccccCCc-cc-ccCCCCccEEEcc--c----Ccccc-----ccChhhhcCCcccceeecccccccc
Q 044996 68 ELREMRTLSLMRNNLEGPMPD-LR-QLGNGALRSVYLS--N----NRFSG-----EIPTDAFDGMTSLRKLLLADNQFNG 134 (678)
Q Consensus 68 ~l~~L~~L~Ls~N~l~g~~p~-~~-~~~~~~L~~L~Ls--~----N~l~G-----~ip~~~~~~l~~L~~l~l~~N~~~g 134 (678)
.+++|+.|+++.|++++..+. +. .+ ++|+.|+|+ + |++++ .++. ++.++++|+.|+|++ .+++
T Consensus 370 ~~~~L~~L~~~~~~l~~~~~~~l~~~~--~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~-l~~~~~~L~~L~L~~-~l~~ 445 (594)
T 2p1m_B 370 GCPKLESVLYFCRQMTNAALITIARNR--PNMTRFRLCIIEPKAPDYLTLEPLDIGFGA-IVEHCKDLRRLSLSG-LLTD 445 (594)
T ss_dssp HCTTCCEEEEEESCCCHHHHHHHHHHC--TTCCEEEEEESSTTCCCTTTCCCTHHHHHH-HHHHCTTCCEEECCS-SCCH
T ss_pred hchhHHHHHHhcCCcCHHHHHHHHhhC--CCcceeEeecccCCCcccccCCchhhHHHH-HHhhCCCccEEeecC-cccH
Confidence 456666666666665543221 11 12 445666665 2 33431 1111 134455555555544 4444
Q ss_pred CCchhhcC-CCCCCeEeccCCcccccCCcc---CCCCCcEEEeecCccc
Q 044996 135 PIPESLTR-LSRLVELRLEGNKFEGQIPDF---QQKDLVSFNVSNNALF 179 (678)
Q Consensus 135 ~~p~~~~~-l~~L~~l~l~~N~l~g~~p~~---~~~~l~~l~l~~N~l~ 179 (678)
..+..++. +++|+.|+|++|.+++..+.. .+++|+.|+|++|.++
T Consensus 446 ~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 446 KVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp HHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCC
T ss_pred HHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCc
Confidence 44444443 555555555555554432221 2345555555555554
No 410
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.09 E-value=3e-06 Score=88.94 Aligned_cols=79 Identities=4% Similarity=-0.024 Sum_probs=54.3
Q ss_pred ccc-CccCceeEEEEEec-------CCceEEEEEecccC---hhhHHHHHHHHHHHhccCC---CCccceeEEEEeC---
Q 044996 375 EIL-GSGCFGSSYKASLS-------TGAMMVVKRFKQMN---NVGREEFQEHMRRLGRLRH---PNLLPLVAYYYRK--- 437 (678)
Q Consensus 375 ~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H---~niv~l~~~~~~~--- 437 (678)
+.| +.|....+|+.... ++..+++|...... ......+.+|+++++.+.. -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 347 88889999998764 25678888765422 1112467788888888742 3467788887654
Q ss_pred CceEEEEeccCCCCHH
Q 044996 438 EEKLLVHEFVPKRSLA 453 (678)
Q Consensus 438 ~~~~lv~Ey~~~gsL~ 453 (678)
+..++||||+++..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3568999999886654
No 411
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.08 E-value=1.5e-06 Score=97.75 Aligned_cols=117 Identities=14% Similarity=0.192 Sum_probs=70.9
Q ss_pred hhcCCCCCEEEccCCcccccCCc-cc-ccCCCCccEEEcccC-ccccc-cChhhhcCCcccceeeccccccccCCchhhc
Q 044996 66 LKELREMRTLSLMRNNLEGPMPD-LR-QLGNGALRSVYLSNN-RFSGE-IPTDAFDGMTSLRKLLLADNQFNGPIPESLT 141 (678)
Q Consensus 66 l~~l~~L~~L~Ls~N~l~g~~p~-~~-~~~~~~L~~L~Ls~N-~l~G~-ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~ 141 (678)
...+++|+.|+|++|.+++..+. +. .+ ++|+.|+|++| .++.. ++ .++.++++|++|+|++|.+++..+..+.
T Consensus 101 ~~~~~~L~~L~L~~~~~~~~~~~~l~~~~--~~L~~L~L~~~~~~~~~~l~-~~~~~~~~L~~L~L~~~~i~~~~~~~l~ 177 (594)
T 2p1m_B 101 SSSYTWLEEIRLKRMVVTDDCLELIAKSF--KNFKVLVLSSCEGFSTDGLA-AIAATCRNLKELDLRESDVDDVSGHWLS 177 (594)
T ss_dssp HHHCTTCCEEEEESCBCCHHHHHHHHHHC--TTCCEEEEESCEEEEHHHHH-HHHHHCTTCCEEECTTCEEECCCGGGGG
T ss_pred HHhCCCCCeEEeeCcEEcHHHHHHHHHhC--CCCcEEeCCCcCCCCHHHHH-HHHHhCCCCCEEeCcCCccCCcchHHHH
Confidence 44677777788877777665432 21 23 56777888777 45433 33 3355677788888887777765554443
Q ss_pred ----CCCCCCeEeccCCcccccCCc-------cCCCCCcEEEeecCcccccCchhhh
Q 044996 142 ----RLSRLVELRLEGNKFEGQIPD-------FQQKDLVSFNVSNNALFGSISPALR 187 (678)
Q Consensus 142 ----~l~~L~~l~l~~N~l~g~~p~-------~~~~~l~~l~l~~N~l~g~ip~~~~ 187 (678)
.+++|+.|+|++|. +.+.. ...++|+.|+|++|...+.+|..+.
T Consensus 178 ~~~~~~~~L~~L~l~~~~--~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~ 232 (594)
T 2p1m_B 178 HFPDTYTSLVSLNISCLA--SEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQ 232 (594)
T ss_dssp GSCTTCCCCCEEECTTCC--SCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHH
T ss_pred HHhhcCCcCcEEEecccC--CcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHh
Confidence 55677888887776 22221 1346777888877732222554443
No 412
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.01 E-value=3.2e-05 Score=80.34 Aligned_cols=142 Identities=15% Similarity=0.225 Sum_probs=79.5
Q ss_pred ccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccC-----CCCcccee-E--EEEeCCceEEEEecc
Q 044996 376 ILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLR-----HPNLLPLV-A--YYYRKEEKLLVHEFV 447 (678)
Q Consensus 376 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----H~niv~l~-~--~~~~~~~~~lv~Ey~ 447 (678)
.|+.|..+.||+....++ .+++|+.... ..++..|.+++..|. .|.++... | +....+..++||||+
T Consensus 39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp ECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 466677899999987655 4888887652 233444555555442 24443311 1 123456789999999
Q ss_pred CCCCHH--------------HHhhccCC-CC-C-------CCCChHHHH-------------------------------
Q 044996 448 PKRSLA--------------VNLHGHQA-LG-Q-------PSLDWPSRL------------------------------- 473 (678)
Q Consensus 448 ~~gsL~--------------~~l~~~~~-~~-~-------~~l~~~~~~------------------------------- 473 (678)
++..+. ..+|.... .. . ..-.|....
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986542 12232111 00 0 012343211
Q ss_pred HHHHHHHHHHHHHHH--------h-CCCCCCcccCCCCCCEEecCCCceEEeecCCcc
Q 044996 474 KIVKGVAKGLQYLYR--------E-LPSLIAPHGHIKSSNVLLNESLEPVLADYGLIP 522 (678)
Q Consensus 474 ~i~~~ia~gL~yLH~--------~-~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 522 (678)
.+...+..++.+|+. . ..+..++|+|+++.|||++.++.+.|+||+.+.
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111223445667763 1 014579999999999999888899999998753
No 413
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.90 E-value=5e-05 Score=80.87 Aligned_cols=74 Identities=14% Similarity=0.153 Sum_probs=48.7
Q ss_pred cccCccCceeEEEEEec-CCceEEEEEecccCh-------hhHHHHHHHHHHHhccCC--CCcc-ceeEEEEeCCceEEE
Q 044996 375 EILGSGCFGSSYKASLS-TGAMMVVKRFKQMNN-------VGREEFQEHMRRLGRLRH--PNLL-PLVAYYYRKEEKLLV 443 (678)
Q Consensus 375 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~H--~niv-~l~~~~~~~~~~~lv 443 (678)
+.||.|.++.||++... .+..+++|....... ...+.+..|.++++.+.. +..+ +++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 46899999999999754 467889997653211 123456778888887742 3333 55543 45567899
Q ss_pred EeccCCC
Q 044996 444 HEFVPKR 450 (678)
Q Consensus 444 ~Ey~~~g 450 (678)
|||+++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999763
No 414
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.87 E-value=1.7e-05 Score=82.15 Aligned_cols=99 Identities=16% Similarity=0.148 Sum_probs=77.8
Q ss_pred cCCCCCEEEccCCcccccCC-cccccCCCCccEEEcccCccccccChhhhcCCcccc-eeeccccccccCCchhhcCCCC
Q 044996 68 ELREMRTLSLMRNNLEGPMP-DLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLR-KLLLADNQFNGPIPESLTRLSR 145 (678)
Q Consensus 68 ~l~~L~~L~Ls~N~l~g~~p-~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~-~l~l~~N~~~g~~p~~~~~l~~ 145 (678)
.+++|+.|+|++|+++...+ .+..+ .+|+.|+|++| +. .|+..+|.++.+|+ .|+|.+ +++..-+..|.+|++
T Consensus 224 ~~~~L~~l~L~~n~i~~I~~~aF~~~--~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~ 298 (329)
T 3sb4_A 224 YMPNLVSLDISKTNATTIPDFTFAQK--KYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDN 298 (329)
T ss_dssp HCTTCCEEECTTBCCCEECTTTTTTC--TTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTT
T ss_pred hcCCCeEEECCCCCcceecHhhhhCC--CCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCcc
Confidence 48999999999998874333 24444 67999999988 76 78888899999999 999988 677566788999999
Q ss_pred CCeEeccCCcccccCCc--c-CCCCCcEEE
Q 044996 146 LVELRLEGNKFEGQIPD--F-QQKDLVSFN 172 (678)
Q Consensus 146 L~~l~l~~N~l~g~~p~--~-~~~~l~~l~ 172 (678)
|+.|+|++|.++ .|+. + .+.+|+.++
T Consensus 299 L~~l~l~~n~i~-~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 299 LRYVLATGDKIT-TLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EEEEEECSSCCC-EECTTTTCTTCCCCEEE
T ss_pred CCEEEeCCCccC-ccchhhhcCCcchhhhc
Confidence 999999999887 4443 2 456777765
No 415
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.84 E-value=6.4e-05 Score=80.70 Aligned_cols=75 Identities=11% Similarity=0.060 Sum_probs=50.5
Q ss_pred CCCCcccCCCCCCEEecCCCceEEeecCCccccCccccc-----cccceeeCccccccC---CCCCcchHHHHHHHHHHH
Q 044996 492 SLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQESAQ-----ELMIAYKSPEFLQLG---RITKKTDVWSLGVLILEI 563 (678)
Q Consensus 492 ~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~-----~~~~~y~aPE~~~~~---~~t~ksDvwS~Gvvl~el 563 (678)
...++|+|+++.|||++.++ ++|+||+.+..-.....- .....|.+|+..... .-....++......+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 45789999999999999876 999999998764432111 112346777655321 112235566888888988
Q ss_pred HhCC
Q 044996 564 MTGK 567 (678)
Q Consensus 564 ~tg~ 567 (678)
++++
T Consensus 310 y~~~ 313 (420)
T 2pyw_A 310 FNKR 313 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8765
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.79 E-value=4.6e-06 Score=78.76 Aligned_cols=110 Identities=18% Similarity=0.286 Sum_probs=82.8
Q ss_pred CCcEEEEEeCCC-Cceee----cChHHhhcCCCCCEEEccCCccccc----CCc-ccccCCCCccEEEcccCccccc---
Q 044996 44 RGKIWGLKLEDM-GLQGN----IDITILKELREMRTLSLMRNNLEGP----MPD-LRQLGNGALRSVYLSNNRFSGE--- 110 (678)
Q Consensus 44 ~~~v~~l~l~~~-~l~g~----~~~~~l~~l~~L~~L~Ls~N~l~g~----~p~-~~~~~~~~L~~L~Ls~N~l~G~--- 110 (678)
...++.|+|++| .+... +. ..+...+.|+.|+|++|.+... +.. +.. +..|++|+|++|+|+..
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~-~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~--n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACA-EALKTNTYVKKFSIVGTRSNDPVAFALAEMLKV--NNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHH-HHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHH--CSSCCEEECCSSCCCHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHH-HHHHhCCCcCEEECcCCCCChHHHHHHHHHHHh--CCCcCEEECcCCcCCHHHHH
Confidence 457999999999 88632 22 2466789999999999998642 111 222 26799999999999853
Q ss_pred -cChhhhcCCcccceeec--cccccccC----CchhhcCCCCCCeEeccCCccc
Q 044996 111 -IPTDAFDGMTSLRKLLL--ADNQFNGP----IPESLTRLSRLVELRLEGNKFE 157 (678)
Q Consensus 111 -ip~~~~~~l~~L~~l~l--~~N~~~g~----~p~~~~~l~~L~~l~l~~N~l~ 157 (678)
|.. .+...++|++|+| ++|.++.. +...+...++|+.|+|++|.+.
T Consensus 112 ~l~~-~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 112 ALVE-ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHH-GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHH-HHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 332 3667789999999 88999864 4455667799999999999885
No 417
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.64 E-value=5.1e-05 Score=79.49 Aligned_cols=131 Identities=15% Similarity=0.202 Sum_probs=87.0
Q ss_pred CcEEEEEeCCCCc---------eeecChHHhhcCCCCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhh
Q 044996 45 GKIWGLKLEDMGL---------QGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDA 115 (678)
Q Consensus 45 ~~v~~l~l~~~~l---------~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~ 115 (678)
.++..|.+.++.. .+.+. ..+..+++|+.|+|++|.-. .++.+. .++|+.|+|..|.++...-..
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~-~ll~~~P~L~~L~L~g~~~l-~l~~~~---~~~L~~L~L~~~~l~~~~l~~- 212 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLS-PVLDAMPLLNNLKIKGTNNL-SIGKKP---RPNLKSLEIISGGLPDSVVED- 212 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCH-HHHHTCTTCCEEEEECCBTC-BCCSCB---CTTCSEEEEECSBCCHHHHHH-
T ss_pred chhhheeecCcchhhcccccccccCHH-HHHhcCCCCcEEEEeCCCCc-eecccc---CCCCcEEEEecCCCChHHHHH-
Confidence 4677787765432 12333 46788999999999988311 244332 378999999988876433222
Q ss_pred hc--CCcccceeeccc--cccccC-----Cchhh--cCCCCCCeEeccCCcccccCCc-----cCCCCCcEEEeecCccc
Q 044996 116 FD--GMTSLRKLLLAD--NQFNGP-----IPESL--TRLSRLVELRLEGNKFEGQIPD-----FQQKDLVSFNVSNNALF 179 (678)
Q Consensus 116 ~~--~l~~L~~l~l~~--N~~~g~-----~p~~~--~~l~~L~~l~l~~N~l~g~~p~-----~~~~~l~~l~l~~N~l~ 179 (678)
+. .+++|+.|+|+. |...|. +-..+ ..+++|++|+|.+|.+.+..+. ..+++|+.|+|+.|.|+
T Consensus 213 l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~ 292 (362)
T 2ra8_A 213 ILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLT 292 (362)
T ss_dssp HHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCB
T ss_pred HHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCC
Confidence 33 789999999863 332222 11122 3578999999999998764432 14678999999999997
Q ss_pred cc
Q 044996 180 GS 181 (678)
Q Consensus 180 g~ 181 (678)
+.
T Consensus 293 d~ 294 (362)
T 2ra8_A 293 DE 294 (362)
T ss_dssp HH
T ss_pred hH
Confidence 64
No 418
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.63 E-value=0.00019 Score=73.45 Aligned_cols=140 Identities=18% Similarity=0.146 Sum_probs=91.0
Q ss_pred cccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccC---CCCccceeEEEEeCCceEEEEeccCCCC
Q 044996 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLR---HPNLLPLVAYYYRKEEKLLVHEFVPKRS 451 (678)
Q Consensus 375 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~~~~~~~~~~~lv~Ey~~~gs 451 (678)
+.|+.|.+..+|+... ++..+++|..... ....|..|.+.|+.|. ...+.++++++...+..++||||+++..
T Consensus 42 ~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~ 117 (312)
T 3jr1_A 42 EKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK 117 (312)
T ss_dssp EEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred EEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence 3578899999999986 4567888876532 3567889999888884 3568888998887788999999999876
Q ss_pred HH-----------HHhhccCC---CCCC--------------CCChHHHH---HHHH--HH-----------HHHHHHHH
Q 044996 452 LA-----------VNLHGHQA---LGQP--------------SLDWPSRL---KIVK--GV-----------AKGLQYLY 487 (678)
Q Consensus 452 L~-----------~~l~~~~~---~~~~--------------~l~~~~~~---~i~~--~i-----------a~gL~yLH 487 (678)
+. ..||.... .+.+ .-+|.... ++.. +. .+-++.+.
T Consensus 118 ~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~ 197 (312)
T 3jr1_A 118 NKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVA 197 (312)
T ss_dssp CCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 42 12343221 1100 12454321 1111 11 11222222
Q ss_pred H----hCCCCCCcccCCCCCCEEecCCCceEEeecC
Q 044996 488 R----ELPSLIAPHGHIKSSNVLLNESLEPVLADYG 519 (678)
Q Consensus 488 ~----~~~~~~ivHrdlk~~NILl~~~~~~kl~DfG 519 (678)
. ......++|+|+.+.||+++.++ +.|.||.
T Consensus 198 ~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 198 DTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 2 12245689999999999999887 8899973
No 419
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.59 E-value=0.00026 Score=71.67 Aligned_cols=74 Identities=18% Similarity=0.229 Sum_probs=54.3
Q ss_pred cccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccCCC---CccceeEEEEeCCceEEEEeccCCCC
Q 044996 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHP---NLLPLVAYYYRKEEKLLVHEFVPKRS 451 (678)
Q Consensus 375 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~~~~~~~~~~~lv~Ey~~~gs 451 (678)
+.+|.|..+.||+.++.+|+.+++|+...........|..|.+.|+.|.-. -+.+++++ +..++||||++.+.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEeecccC
Confidence 458999999999999999999999987654434445688999998888422 23445544 23579999998765
Q ss_pred H
Q 044996 452 L 452 (678)
Q Consensus 452 L 452 (678)
.
T Consensus 97 ~ 97 (288)
T 3f7w_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 3
No 420
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.51 E-value=2.9e-05 Score=81.37 Aligned_cols=131 Identities=18% Similarity=0.234 Sum_probs=89.4
Q ss_pred CcEEEEEeCCCC-ceeecChHHhhcCCCCCEEEccCCcccccCC-cccccCCCCccEEEccc--Cccccc--c---Chhh
Q 044996 45 GKIWGLKLEDMG-LQGNIDITILKELREMRTLSLMRNNLEGPMP-DLRQLGNGALRSVYLSN--NRFSGE--I---PTDA 115 (678)
Q Consensus 45 ~~v~~l~l~~~~-l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~~~~~~L~~L~Ls~--N~l~G~--i---p~~~ 115 (678)
.++..|+|.++. + .+++ + .+++|+.|+|..|.+....- .+.....++|+.|+|+. |+..|. + -+ .
T Consensus 172 P~L~~L~L~g~~~l--~l~~--~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~-~ 245 (362)
T 2ra8_A 172 PLLNNLKIKGTNNL--SIGK--K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRP-L 245 (362)
T ss_dssp TTCCEEEEECCBTC--BCCS--C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGG-G
T ss_pred CCCcEEEEeCCCCc--eecc--c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHH-H
Confidence 478899998762 2 3443 3 38899999999888754211 12211227799999863 333222 1 11 1
Q ss_pred h--cCCcccceeeccccccccCCchhhc---CCCCCCeEeccCCccccc----CCcc--CCCCCcEEEeecCccccc
Q 044996 116 F--DGMTSLRKLLLADNQFNGPIPESLT---RLSRLVELRLEGNKFEGQ----IPDF--QQKDLVSFNVSNNALFGS 181 (678)
Q Consensus 116 ~--~~l~~L~~l~l~~N~~~g~~p~~~~---~l~~L~~l~l~~N~l~g~----~p~~--~~~~l~~l~l~~N~l~g~ 181 (678)
+ ..+++|++|+|.+|.+++..+..+. .+++|++|+|+.|.+.+. ++.. .+++|+.|+|++|.++..
T Consensus 246 l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~ 322 (362)
T 2ra8_A 246 FSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDE 322 (362)
T ss_dssp SCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHH
T ss_pred HhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHH
Confidence 2 3579999999999999866555554 578999999999999874 2221 457899999999998754
No 421
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.41 E-value=0.00053 Score=72.92 Aligned_cols=123 Identities=14% Similarity=0.196 Sum_probs=70.6
Q ss_pred EEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCcccccCCCCccEEEcccCccccccChhhhcCCcccceee
Q 044996 47 IWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLL 126 (678)
Q Consensus 47 v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~ 126 (678)
+..|.|.+ ++. .|....|.+|++|+.++|++|++.-.-...... .+|+.+.|.+| +. .|+..+|.++++|+.++
T Consensus 159 L~~i~lp~-~l~-~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~~--~~L~~l~lp~~-l~-~I~~~aF~~~~~L~~l~ 232 (401)
T 4fdw_A 159 VQEIVFPS-TLE-QLKEDIFYYCYNLKKADLSKTKITKLPASTFVY--AGIEEVLLPVT-LK-EIGSQAFLKTSQLKTIE 232 (401)
T ss_dssp CCEEECCT-TCC-EECSSTTTTCTTCCEEECTTSCCSEECTTTTTT--CCCSEEECCTT-CC-EECTTTTTTCTTCCCEE
T ss_pred ceEEEeCC-Ccc-EehHHHhhCcccCCeeecCCCcceEechhhEee--cccCEEEeCCc-hh-eehhhHhhCCCCCCEEe
Confidence 55555554 333 444455677777777777777766433322222 56777777643 55 56666677777777777
Q ss_pred ccccccccCCchhhcCCCCCCeEeccCCcccccCCcc---CCCCCcEEEeecCccc
Q 044996 127 LADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF---QQKDLVSFNVSNNALF 179 (678)
Q Consensus 127 l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~---~~~~l~~l~l~~N~l~ 179 (678)
|..| ++..-...|.+ .+|+.+.|. |.++ .|+.. .+.+|+.+++.+|.+.
T Consensus 233 l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~-~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 233 IPEN-VSTIGQEAFRE-SGITTVKLP-NGVT-NIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp CCTT-CCEECTTTTTT-CCCSEEEEE-TTCC-EECTTTTTTCTTCCEEEEESSCCC
T ss_pred cCCC-ccCcccccccc-CCccEEEeC-CCcc-EEChhHhhCCCCCCEEEeCCcccc
Confidence 7654 33222334444 567777763 3333 34331 4567777777776654
No 422
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.33 E-value=0.0016 Score=66.87 Aligned_cols=143 Identities=15% Similarity=0.182 Sum_probs=82.0
Q ss_pred cCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccCCC--CccceeEE-----EEeCCceEEEEeccCC
Q 044996 377 LGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHP--NLLPLVAY-----YYRKEEKLLVHEFVPK 449 (678)
Q Consensus 377 lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~--niv~l~~~-----~~~~~~~~lv~Ey~~~ 449 (678)
++ |....||+....+|+.+++|..... ......+..|..++..+... .+.+++.. ....+..++||||+++
T Consensus 34 l~-g~~n~~y~v~~~~g~~~vlK~~~~~-~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G 111 (328)
T 1zyl_A 34 LN-SYENRVYQFQDEDRRRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG 111 (328)
T ss_dssp EC-CSSSEEEEECCTTCCCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred ec-CcccceEEEEcCCCCEEEEEEcCCC-CCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCC
Confidence 55 7778899988777778899988632 12345677788887777422 23444443 1224556789999987
Q ss_pred CCHH-----H---------HhhccCC----CCCCCCChHHH----HHH---------------HHHHHHHHHHHHHhC--
Q 044996 450 RSLA-----V---------NLHGHQA----LGQPSLDWPSR----LKI---------------VKGVAKGLQYLYREL-- 490 (678)
Q Consensus 450 gsL~-----~---------~l~~~~~----~~~~~l~~~~~----~~i---------------~~~ia~gL~yLH~~~-- 490 (678)
..+. . .+|.... ...+.+++... ..+ ...+...++.+....
T Consensus 112 ~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 191 (328)
T 1zyl_A 112 RQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWRE 191 (328)
T ss_dssp EECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4431 1 1221110 00112333211 001 111222234444332
Q ss_pred -CCCCCcccCCCCCCEEecCCCceEEeecCCccc
Q 044996 491 -PSLIAPHGHIKSSNVLLNESLEPVLADYGLIPV 523 (678)
Q Consensus 491 -~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~ 523 (678)
.+..++|+|+++.|||++ + .+.|+||+.+..
T Consensus 192 ~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 192 DFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred cCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 244688999999999999 4 899999987643
No 423
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.25 E-value=0.00058 Score=72.64 Aligned_cols=124 Identities=15% Similarity=0.200 Sum_probs=74.4
Q ss_pred cEEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCC--cccccCCCCccEEEcccCccc----cccChhhhcCC
Q 044996 46 KIWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMP--DLRQLGNGALRSVYLSNNRFS----GEIPTDAFDGM 119 (678)
Q Consensus 46 ~v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p--~~~~~~~~~L~~L~Ls~N~l~----G~ip~~~~~~l 119 (678)
.+..|+|..+ +. .|+...|.+ .+|+.+.|. |++.- |+ .+..+ .+|+.++|.+|.+. ..|+...|.++
T Consensus 227 ~L~~l~l~~~-l~-~I~~~aF~~-~~L~~i~lp-~~i~~-I~~~aF~~c--~~L~~l~l~~~~~~~~~~~~I~~~aF~~c 299 (401)
T 4fdw_A 227 QLKTIEIPEN-VS-TIGQEAFRE-SGITTVKLP-NGVTN-IASRAFYYC--PELAEVTTYGSTFNDDPEAMIHPYCLEGC 299 (401)
T ss_dssp TCCCEECCTT-CC-EECTTTTTT-CCCSEEEEE-TTCCE-ECTTTTTTC--TTCCEEEEESSCCCCCTTCEECTTTTTTC
T ss_pred CCCEEecCCC-cc-Ccccccccc-CCccEEEeC-CCccE-EChhHhhCC--CCCCEEEeCCccccCCcccEECHHHhhCC
Confidence 4566666653 32 455555665 677777774 33332 22 23333 56777777777664 23666677777
Q ss_pred cccceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCc--cCCCCCcEEEeecCccc
Q 044996 120 TSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPD--FQQKDLVSFNVSNNALF 179 (678)
Q Consensus 120 ~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~--~~~~~l~~l~l~~N~l~ 179 (678)
++|+.++|. |.++-.-...|.+|.+|+.+.|.+| ++ .|.. +...+|+.+++++|.+.
T Consensus 300 ~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~-~I~~~aF~~~~L~~l~l~~n~~~ 358 (401)
T 4fdw_A 300 PKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VT-QINFSAFNNTGIKEVKVEGTTPP 358 (401)
T ss_dssp TTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CC-EECTTSSSSSCCCEEEECCSSCC
T ss_pred ccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-cc-EEcHHhCCCCCCCEEEEcCCCCc
Confidence 788887777 3455444556777777877777554 33 3433 22227777777777653
No 424
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.23 E-value=0.0013 Score=67.40 Aligned_cols=145 Identities=11% Similarity=0.119 Sum_probs=81.1
Q ss_pred cccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccCCCC--ccceeEE------EEeCCceEEEEec
Q 044996 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPN--LLPLVAY------YYRKEEKLLVHEF 446 (678)
Q Consensus 375 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~~~------~~~~~~~~lv~Ey 446 (678)
+.|+.|....+|+....++ .+++|..... ...+++..|+.++..+.... +.+++.. ....+..+++|||
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~ 104 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF 104 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence 3467788889999987665 5778887652 12234556777777664222 2333321 1224567899999
Q ss_pred cCCCCHH--------------HHhhccC-CCCCCC------CChHHHHH------------HHHHHHHHHHHHHHhCC--
Q 044996 447 VPKRSLA--------------VNLHGHQ-ALGQPS------LDWPSRLK------------IVKGVAKGLQYLYRELP-- 491 (678)
Q Consensus 447 ~~~gsL~--------------~~l~~~~-~~~~~~------l~~~~~~~------------i~~~ia~gL~yLH~~~~-- 491 (678)
+++..+. ..+|... ....+. ..|...+. +...+...+++++...+
T Consensus 105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~ 184 (322)
T 2ppq_A 105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD 184 (322)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence 9875532 1123211 111110 12332111 11124556667765432
Q ss_pred -CCCCcccCCCCCCEEecCCCceEEeecCCcc
Q 044996 492 -SLIAPHGHIKSSNVLLNESLEPVLADYGLIP 522 (678)
Q Consensus 492 -~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 522 (678)
+..++|+|+.+.|||++++..+.|+||+.+.
T Consensus 185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp SCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 3468999999999999987666899998753
No 425
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.00 E-value=0.0031 Score=65.07 Aligned_cols=143 Identities=14% Similarity=0.064 Sum_probs=72.9
Q ss_pred ccCccCcee-EEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccCC--CCccceeEEEEeCCceEEEEeccCCCCH
Q 044996 376 ILGSGCFGS-SYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRH--PNLLPLVAYYYRKEEKLLVHEFVPKRSL 452 (678)
Q Consensus 376 ~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H--~niv~l~~~~~~~~~~~lv~Ey~~~gsL 452 (678)
.|+.|.... +|+....++..+++|...... .+++..|+.++..+.. -.+.+++.+.. +.-++|||++.+..+
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~--~~g~ll~e~l~~~~l 99 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEH--ARGLLLIEDLGDALF 99 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEET--TTTEEEECCCCSCBH
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecC--CCCEEEEeeCCCcch
Confidence 355554443 667765446667777544321 1334556666666632 23556676643 333789999977666
Q ss_pred HHHhhcc---------------------CCCCCCCCChHHHH-------H-------------HHHHHHHHHHHHHHh--
Q 044996 453 AVNLHGH---------------------QALGQPSLDWPSRL-------K-------------IVKGVAKGLQYLYRE-- 489 (678)
Q Consensus 453 ~~~l~~~---------------------~~~~~~~l~~~~~~-------~-------------i~~~ia~gL~yLH~~-- 489 (678)
.+++... ...+.+.++..... . ....+...++.+...
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~ 179 (333)
T 3csv_A 100 TEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQL 179 (333)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 5443221 00001112111000 0 001122223333221
Q ss_pred CCCCCCcccCCCCCCEEecCC----CceEEeecCCccc
Q 044996 490 LPSLIAPHGHIKSSNVLLNES----LEPVLADYGLIPV 523 (678)
Q Consensus 490 ~~~~~ivHrdlk~~NILl~~~----~~~kl~DfGla~~ 523 (678)
..+..++|+|+.+.|||++.+ ..+.|+||+.+..
T Consensus 180 ~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 180 EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred cCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 124568999999999999875 6789999998754
No 426
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.92 E-value=0.00099 Score=58.57 Aligned_cols=56 Identities=20% Similarity=0.383 Sum_probs=36.4
Q ss_pred EEEccCCccc-ccCCcccccCCCCccEEEcccCccccccChhhhcCCcccceeeccccccc
Q 044996 74 TLSLMRNNLE-GPMPDLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFN 133 (678)
Q Consensus 74 ~L~Ls~N~l~-g~~p~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~ 133 (678)
.++.+++.|+ ..+|. .+. .+|+.|+|++|+|+ .||..+|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~--~lp-~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPT--AFP-VDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCS--CCC-TTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCC--CCC-cCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCee
Confidence 4555556554 23442 121 45788888888888 677777777777777777777664
No 427
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.91 E-value=0.0033 Score=66.05 Aligned_cols=142 Identities=14% Similarity=0.219 Sum_probs=82.4
Q ss_pred ccCccCceeEEEEEec--------CCceEEEEEecccChhhHHHHHHHHHHHhccCCCC-ccceeEEEEeCCceEEEEec
Q 044996 376 ILGSGCFGSSYKASLS--------TGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPN-LLPLVAYYYRKEEKLLVHEF 446 (678)
Q Consensus 376 ~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~n-iv~l~~~~~~~~~~~lv~Ey 446 (678)
.|..|-...+|+.... ++..+++|+.... ......+.+|.++++.+.-.+ ..++++++.+ .+||||
T Consensus 57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~ 131 (379)
T 3feg_A 57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQY 131 (379)
T ss_dssp EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEEC
T ss_pred EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEE
Confidence 4666777889998764 2467888876432 224556778999988874323 3566666543 299999
Q ss_pred cCCCCHHH-----------------HhhccCC-CCCCCC-ChHHHHHHHHHHH-------------------HHHHHHHH
Q 044996 447 VPKRSLAV-----------------NLHGHQA-LGQPSL-DWPSRLKIVKGVA-------------------KGLQYLYR 488 (678)
Q Consensus 447 ~~~gsL~~-----------------~l~~~~~-~~~~~l-~~~~~~~i~~~ia-------------------~gL~yLH~ 488 (678)
+++..|.. -||.... .+.... -|.++.++..++. ..+.+|..
T Consensus 132 i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 211 (379)
T 3feg_A 132 IPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRK 211 (379)
T ss_dssp CSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHH
T ss_pred ecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHH
Confidence 98755431 1222111 111111 2445555544432 23444443
Q ss_pred h----CCCCCCcccCCCCCCEEecCC----CceEEeecCCcc
Q 044996 489 E----LPSLIAPHGHIKSSNVLLNES----LEPVLADYGLIP 522 (678)
Q Consensus 489 ~----~~~~~ivHrdlk~~NILl~~~----~~~kl~DfGla~ 522 (678)
. ..+..++|+|+.+.|||++.+ +.+.|+||..+.
T Consensus 212 ~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 212 LLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 2 223468899999999999876 789999998764
No 428
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.91 E-value=0.0013 Score=66.90 Aligned_cols=140 Identities=11% Similarity=0.054 Sum_probs=74.6
Q ss_pred cccCccCceeEEEEEecCCceEEEEEecccChhhHHHHHHHHHHHhccCCCCc-cceeEEEEeCCceEEEEecc-CCCCH
Q 044996 375 EILGSGCFGSSYKASLSTGAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNL-LPLVAYYYRKEEKLLVHEFV-PKRSL 452 (678)
Q Consensus 375 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~Ey~-~~gsL 452 (678)
+.|+.|....+|+. ..+++|+....... ..+..+|+.+++.+....+ .+++++ +.+.-++|+||+ ++.++
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM 95 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence 35788889999998 45788877643211 1123467777777643333 355544 345568999999 55444
Q ss_pred HH------------------HhhccCCCCCCCCChHHH-HHHHH--------------HHHHHHHHHHH----hCCCCCC
Q 044996 453 AV------------------NLHGHQALGQPSLDWPSR-LKIVK--------------GVAKGLQYLYR----ELPSLIA 495 (678)
Q Consensus 453 ~~------------------~l~~~~~~~~~~l~~~~~-~~i~~--------------~ia~gL~yLH~----~~~~~~i 495 (678)
.. -+|..........+...+ ..+.. .+...+..+.. ...+..+
T Consensus 96 ~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l 175 (301)
T 3dxq_A 96 SPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLAA 175 (301)
T ss_dssp CHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCEE
T ss_pred CHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCcee
Confidence 21 112111100000111111 11111 11112222221 1223458
Q ss_pred cccCCCCCCEEecCCCceEEeecCCccc
Q 044996 496 PHGHIKSSNVLLNESLEPVLADYGLIPV 523 (678)
Q Consensus 496 vHrdlk~~NILl~~~~~~kl~DfGla~~ 523 (678)
+|+|+.+.||+ .+++.+.|+||..+..
T Consensus 176 ~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 176 CHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp ECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eccCCCcCCEE-ECCCCEEEEecccccC
Confidence 99999999999 5667789999988654
No 429
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.86 E-value=0.0038 Score=66.87 Aligned_cols=71 Identities=13% Similarity=0.163 Sum_probs=47.9
Q ss_pred cccCccCceeEEEEEecC--------CceEEEEEecccChhhHHHHHHHHHHHhccCCCCc-cceeEEEEeCCceEEEEe
Q 044996 375 EILGSGCFGSSYKASLST--------GAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNL-LPLVAYYYRKEEKLLVHE 445 (678)
Q Consensus 375 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~E 445 (678)
+.|+.|....+|+....+ +..+++|+.... ...+.+..|..++..+...++ .++++.+.+ .+|||
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 357888889999998753 467888887431 112456678888888853344 566766532 38999
Q ss_pred ccCCCC
Q 044996 446 FVPKRS 451 (678)
Q Consensus 446 y~~~gs 451 (678)
|+++.+
T Consensus 153 ~l~G~~ 158 (429)
T 1nw1_A 153 YIPSRP 158 (429)
T ss_dssp CCCEEE
T ss_pred EeCCcc
Confidence 997633
No 430
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.78 E-value=0.0016 Score=68.26 Aligned_cols=71 Identities=7% Similarity=0.084 Sum_probs=42.2
Q ss_pred ccCccCceeEEEEEecC---------CceEEEEEecccChhhHHHHHHHHHHHhccCCCCc-cceeEEEEeCCceEEEEe
Q 044996 376 ILGSGCFGSSYKASLST---------GAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNL-LPLVAYYYRKEEKLLVHE 445 (678)
Q Consensus 376 ~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~E 445 (678)
.|+.|..-.+|+....+ +..+++|........ ..+...|.++++.+...++ .++++.. . -++|||
T Consensus 40 ~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~e 114 (369)
T 3c5i_A 40 QILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIEE 114 (369)
T ss_dssp EC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred EeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEEE
Confidence 47778888999997654 257788876543221 1123577888877753343 4666544 2 378999
Q ss_pred ccCCCC
Q 044996 446 FVPKRS 451 (678)
Q Consensus 446 y~~~gs 451 (678)
|+++..
T Consensus 115 ~i~G~~ 120 (369)
T 3c5i_A 115 WLYGDP 120 (369)
T ss_dssp CCCSEE
T ss_pred EecCCc
Confidence 998754
No 431
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.59 E-value=0.011 Score=63.68 Aligned_cols=73 Identities=12% Similarity=0.139 Sum_probs=46.1
Q ss_pred cccCccCceeEEEEEecC-CceEEEEEecccChhhHHHHHHHHHHHhccCCCCc-cceeEEEEeCCceEEEEeccCCCCH
Q 044996 375 EILGSGCFGSSYKASLST-GAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNL-LPLVAYYYRKEEKLLVHEFVPKRSL 452 (678)
Q Consensus 375 ~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~Ey~~~gsL 452 (678)
+.|+.|-...+|+....+ +..+++|+........ -+..+|..++..|...++ .++++++. + .+||||+++..|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 357888889999998765 4678888765322111 112578888888865555 46777662 2 359999987443
No 432
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.54 E-value=0.0023 Score=56.12 Aligned_cols=57 Identities=23% Similarity=0.336 Sum_probs=44.5
Q ss_pred cEEEcccCccc-cccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCccc
Q 044996 98 RSVYLSNNRFS-GEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFE 157 (678)
Q Consensus 98 ~~L~Ls~N~l~-G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~ 157 (678)
..++.++++|+ ..||.. +. .+|+.|+|++|+|+..-+..|..+++|+.|+|++|.|.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~-lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTA-FP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSC-CC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCC-CC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 47888999886 467754 22 46899999999998666666788889999999888775
No 433
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.37 E-value=0.0081 Score=62.15 Aligned_cols=31 Identities=19% Similarity=0.268 Sum_probs=27.1
Q ss_pred CCCcccCCCCCCEEecCCCceEEeecCCccc
Q 044996 493 LIAPHGHIKSSNVLLNESLEPVLADYGLIPV 523 (678)
Q Consensus 493 ~~ivHrdlk~~NILl~~~~~~kl~DfGla~~ 523 (678)
..++|+|+.+.||++++++.+.|+||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4689999999999999888899999987643
No 434
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.10 E-value=0.069 Score=50.60 Aligned_cols=104 Identities=12% Similarity=-0.005 Sum_probs=68.3
Q ss_pred CCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCccccCccc
Q 044996 449 KRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIPVMNQES 528 (678)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 528 (678)
.-+|.++|..... ++++.+++.++.|.+.+|.-+-.... . ..+=+-+..|+|..+|.+.+.+ ..+
T Consensus 32 ~vSL~eIL~~~~~----PlsEEqaWALc~Qc~~~L~~~~~~~~--~-~~~i~~~~~i~l~~dG~V~f~~-~~s------- 96 (229)
T 2yle_A 32 ALSLEEILRLYNQ----PINEEQAWAVCYQCCGSLRAAARRRQ--P-RHRVRSAAQIRVWRDGAVTLAP-AAD------- 96 (229)
T ss_dssp EEEHHHHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTTC--C-CCCCCSGGGEEEETTSCEEECC-C---------
T ss_pred cccHHHHHHHcCC----CcCHHHHHHHHHHHHHHHHhhhhccc--C-CceecCCcceEEecCCceeccc-ccc-------
Confidence 3479999987654 79999999999999999876622100 1 1223456899999999987764 111
Q ss_pred cccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCC
Q 044996 529 AQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFP 569 (678)
Q Consensus 529 ~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P 569 (678)
......+.+||... ...+.+.=|||+|+++|.-+--..|
T Consensus 97 -~~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 97 -DAGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred -cccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 01123467898774 3557888999999999999875555
No 435
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=95.97 E-value=0.0024 Score=58.97 Aligned_cols=12 Identities=25% Similarity=0.207 Sum_probs=4.8
Q ss_pred CCCCCCeEeccC
Q 044996 142 RLSRLVELRLEG 153 (678)
Q Consensus 142 ~l~~L~~l~l~~ 153 (678)
++++|+.|+|++
T Consensus 137 ~~~~L~~L~L~~ 148 (176)
T 3e4g_A 137 HFRNLKYLFLSD 148 (176)
T ss_dssp GCTTCCEEEEES
T ss_pred cCCCCCEEECCC
Confidence 334444444433
No 436
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.72 E-value=0.0034 Score=59.12 Aligned_cols=112 Identities=13% Similarity=0.194 Sum_probs=72.5
Q ss_pred HhhcCCCCCEEEccCC-ccccc----CC-cccccCCCCccEEEcccCccccc----cChhhhcCCcccceeecccccccc
Q 044996 65 ILKELREMRTLSLMRN-NLEGP----MP-DLRQLGNGALRSVYLSNNRFSGE----IPTDAFDGMTSLRKLLLADNQFNG 134 (678)
Q Consensus 65 ~l~~l~~L~~L~Ls~N-~l~g~----~p-~~~~~~~~~L~~L~Ls~N~l~G~----ip~~~~~~l~~L~~l~l~~N~~~g 134 (678)
.+.+=+.|+.|+|++| ++... +- .+. .++.|+.|+|++|+|... |- +.+..-+.|+.|+|++|+++.
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~--~N~~L~~L~L~~n~igd~ga~alA-~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAAC--NSKHIEKFSLANTAISDSEARGLI-ELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHT--TCSCCCEEECTTSCCBHHHHTTHH-HHHHHCSSCCEEECCSSBCCH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHh--hCCCcCEEEccCCCCChHHHHHHH-HHHhcCCccCeEecCCCcCCH
Confidence 3555678999999986 65421 11 121 236799999999999732 21 224456789999999999975
Q ss_pred C----CchhhcCCCCCCeEeccCCc---ccccC----Cc--cCCCCCcEEEeecCccc
Q 044996 135 P----IPESLTRLSRLVELRLEGNK---FEGQI----PD--FQQKDLVSFNVSNNALF 179 (678)
Q Consensus 135 ~----~p~~~~~l~~L~~l~l~~N~---l~g~~----p~--~~~~~l~~l~l~~N~l~ 179 (678)
. |-..+..-+.|+.|+|++|. +.... -. ...+.|+.|+++.|.+.
T Consensus 113 ~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 113 ELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 3 33445566779999998653 22111 11 13467889999887753
No 437
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.40 E-value=0.059 Score=56.74 Aligned_cols=142 Identities=17% Similarity=0.221 Sum_probs=78.3
Q ss_pred cCccCceeEEEEEecC--------CceEEEEEecccCh-----------hhHH-------HHHHHHHHHhccCCCC-ccc
Q 044996 377 LGSGCFGSSYKASLST--------GAMMVVKRFKQMNN-----------VGRE-------EFQEHMRRLGRLRHPN-LLP 429 (678)
Q Consensus 377 lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~-----------~~~~-------~~~~e~~~l~~l~H~n-iv~ 429 (678)
|..|-...+|++...+ +..++++..-.... .+++ ....|..+++.+...+ ..+
T Consensus 60 l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~Pk 139 (401)
T 3f2s_A 60 IRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLGPK 139 (401)
T ss_dssp EECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSSCC
T ss_pred cCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCCCe
Confidence 5556667788887653 25677777644322 1111 2234888888875333 456
Q ss_pred eeEEEEeCCceEEEEeccCCCCHHH-----------------HhhccCCCCCCCCC--hHHHHHHHHHHH----------
Q 044996 430 LVAYYYRKEEKLLVHEFVPKRSLAV-----------------NLHGHQALGQPSLD--WPSRLKIVKGVA---------- 480 (678)
Q Consensus 430 l~~~~~~~~~~~lv~Ey~~~gsL~~-----------------~l~~~~~~~~~~l~--~~~~~~i~~~ia---------- 480 (678)
+++++.+ .+|+||+++.+|.. -+|........... |.+..++..++.
T Consensus 140 l~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~ 215 (401)
T 3f2s_A 140 LYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESRI 215 (401)
T ss_dssp EEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHHHH
T ss_pred EEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchhhh
Confidence 7777632 29999998644421 12221111111222 334333433221
Q ss_pred ------------HHHHHHH----HhCCCCCCcccCCCCCCEEecCC------CceEEeecCCcc
Q 044996 481 ------------KGLQYLY----RELPSLIAPHGHIKSSNVLLNES------LEPVLADYGLIP 522 (678)
Q Consensus 481 ------------~gL~yLH----~~~~~~~ivHrdlk~~NILl~~~------~~~kl~DfGla~ 522 (678)
.-+.+|. ....+..++|+|+.+.|||++++ +.+.|+||..+.
T Consensus 216 ~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 216 KKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 1233332 22234568899999999999887 789999997753
No 438
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=95.35 E-value=0.0064 Score=56.07 Aligned_cols=82 Identities=12% Similarity=0.178 Sum_probs=57.6
Q ss_pred CCccEEEcccCccccccChhhhcCCcccceeeccccc-cccCCchhhcCC----CCCCeEeccCCc-cccc-CCc-cCCC
Q 044996 95 GALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQ-FNGPIPESLTRL----SRLVELRLEGNK-FEGQ-IPD-FQQK 166 (678)
Q Consensus 95 ~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~-~~g~~p~~~~~l----~~L~~l~l~~N~-l~g~-~p~-~~~~ 166 (678)
-.|+.|||+++.++..==.. +.++++|+.|+|+++. ++..-=..++.+ ++|++|+|+++. ++.. +-. ..++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~-L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~ 139 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDH-MEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFR 139 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGG-GTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCT
T ss_pred ceEeEEeCcCCCccHHHHHH-hcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCC
Confidence 45899999998886431122 6788999999999984 775444456654 479999999975 5531 111 2568
Q ss_pred CCcEEEeecCc
Q 044996 167 DLVSFNVSNNA 177 (678)
Q Consensus 167 ~l~~l~l~~N~ 177 (678)
+|+.|+|++..
T Consensus 140 ~L~~L~L~~c~ 150 (176)
T 3e4g_A 140 NLKYLFLSDLP 150 (176)
T ss_dssp TCCEEEEESCT
T ss_pred CCCEEECCCCC
Confidence 99999999874
No 439
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.01 E-value=0.058 Score=56.82 Aligned_cols=109 Identities=15% Similarity=0.304 Sum_probs=75.2
Q ss_pred cChHHhhcCCCCCEEEccCCcccccCCc--ccccCCCCccEEEcccCccccccChhhhcCCcccceeeccccccccCCch
Q 044996 61 IDITILKELREMRTLSLMRNNLEGPMPD--LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPE 138 (678)
Q Consensus 61 ~~~~~l~~l~~L~~L~Ls~N~l~g~~p~--~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~ 138 (678)
+....|.++..|+.+.+..+... |.. +..+ ..|+.+.+. +.++ .|+...|.++.+|+.++|..| ++-.-..
T Consensus 256 i~~~aF~~c~~L~~i~lp~~~~~--I~~~aF~~c--~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~ 328 (394)
T 4gt6_A 256 IETHAFDSCAYLASVKMPDSVVS--IGTGAFMNC--PALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-ITQILDD 328 (394)
T ss_dssp ECTTTTTTCSSCCEEECCTTCCE--ECTTTTTTC--TTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CCEECTT
T ss_pred cccceeeecccccEEecccccce--ecCcccccc--cccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-ccEehHh
Confidence 33445788889999988766543 332 3333 668888886 4555 688888888889999888765 4433355
Q ss_pred hhcCCCCCCeEeccCCcccccCCcc---CCCCCcEEEeecCcc
Q 044996 139 SLTRLSRLVELRLEGNKFEGQIPDF---QQKDLVSFNVSNNAL 178 (678)
Q Consensus 139 ~~~~l~~L~~l~l~~N~l~g~~p~~---~~~~l~~l~l~~N~l 178 (678)
+|.+|.+|+.+.|..+ ++ .|... .+.+|+.+++.+|..
T Consensus 329 aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 329 AFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp TTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCHH
T ss_pred HhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCcee
Confidence 6888888988888655 33 45542 567888888887754
No 440
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=94.71 E-value=0.1 Score=54.83 Aligned_cols=76 Identities=18% Similarity=0.246 Sum_probs=38.3
Q ss_pred CCccEEEcccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCc--c-CCCCCcEE
Q 044996 95 GALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPD--F-QQKDLVSF 171 (678)
Q Consensus 95 ~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~--~-~~~~l~~l 171 (678)
..|+.+.+.++.. .|....|.++++|+.+.+. +.++..-...|.++.+|+.+.|..| ++ .|.. + .+.+|+.+
T Consensus 265 ~~L~~i~lp~~~~--~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i 339 (394)
T 4gt6_A 265 AYLASVKMPDSVV--SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQLERI 339 (394)
T ss_dssp SSCCEEECCTTCC--EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEE
T ss_pred ccccEEecccccc--eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCCCCEE
Confidence 4466666654433 3555556666666666664 3333222334556666666666543 22 2332 1 33556666
Q ss_pred Eeec
Q 044996 172 NVSN 175 (678)
Q Consensus 172 ~l~~ 175 (678)
.+..
T Consensus 340 ~ip~ 343 (394)
T 4gt6_A 340 AIPS 343 (394)
T ss_dssp EECT
T ss_pred EECc
Confidence 6543
No 441
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=94.35 E-value=0.019 Score=53.88 Aligned_cols=81 Identities=22% Similarity=0.304 Sum_probs=59.1
Q ss_pred CCccEEEcccC-ccccc----cChhhhcCCcccceeecccccccc----CCchhhcCCCCCCeEeccCCcccccCCc---
Q 044996 95 GALRSVYLSNN-RFSGE----IPTDAFDGMTSLRKLLLADNQFNG----PIPESLTRLSRLVELRLEGNKFEGQIPD--- 162 (678)
Q Consensus 95 ~~L~~L~Ls~N-~l~G~----ip~~~~~~l~~L~~l~l~~N~~~g----~~p~~~~~l~~L~~l~l~~N~l~g~~p~--- 162 (678)
+.|+.|+|++| ++... |- +.+...+.|+.|+|++|++.. .|-..+..-+.|+.|+|++|.|...--.
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la-~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLI-EAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHH-HHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHH-HHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 67999999986 77521 22 235677899999999999974 2444555668999999999999743211
Q ss_pred ---cCCCCCcEEEeecC
Q 044996 163 ---FQQKDLVSFNVSNN 176 (678)
Q Consensus 163 ---~~~~~l~~l~l~~N 176 (678)
...+.|+.|+|++|
T Consensus 120 ~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHTTTTCCCSEEECCCC
T ss_pred HHHhhCCceeEEECCCC
Confidence 13457999999875
No 442
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.07 E-value=0.08 Score=56.24 Aligned_cols=141 Identities=13% Similarity=0.161 Sum_probs=82.2
Q ss_pred ccCccCceeEEEEEecC--------CceEEEEEecccChhhHHHHHHHHHHHhccCCCC-ccceeEEEEeCCceEEEEec
Q 044996 376 ILGSGCFGSSYKASLST--------GAMMVVKRFKQMNNVGREEFQEHMRRLGRLRHPN-LLPLVAYYYRKEEKLLVHEF 446 (678)
Q Consensus 376 ~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~n-iv~l~~~~~~~~~~~lv~Ey 446 (678)
.+..|-...+|+....+ +..+++|+....... .-+..+|.++++.+.-.+ ..++++.+ . -++||||
T Consensus 77 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~ef 151 (424)
T 3mes_A 77 QIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEEF 151 (424)
T ss_dssp EECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEEC
T ss_pred EcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEEE
Confidence 46667788899988753 567888876543211 112356788877774323 34556543 2 3789999
Q ss_pred cCCCCHHH-----------------HhhccCC-----C---CCCCCChHHHHHHHHH-------------------HHHH
Q 044996 447 VPKRSLAV-----------------NLHGHQA-----L---GQPSLDWPSRLKIVKG-------------------VAKG 482 (678)
Q Consensus 447 ~~~gsL~~-----------------~l~~~~~-----~---~~~~l~~~~~~~i~~~-------------------ia~g 482 (678)
+++..|.. -||.... . +..+.-|.++.++..+ +...
T Consensus 152 I~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~e 231 (424)
T 3mes_A 152 IDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILEE 231 (424)
T ss_dssp CCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHHH
T ss_pred eCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHHH
Confidence 98865321 1121111 0 1112234444433322 2233
Q ss_pred HHHHHHhC--------------------CCCCCcccCCCCCCEEecCCCceEEeecCCcc
Q 044996 483 LQYLYREL--------------------PSLIAPHGHIKSSNVLLNESLEPVLADYGLIP 522 (678)
Q Consensus 483 L~yLH~~~--------------------~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 522 (678)
+.+|.+.. .+..++|+|+.+.||+ ++++.+.|+||..+.
T Consensus 232 ~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~ 290 (424)
T 3mes_A 232 IDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSA 290 (424)
T ss_dssp HHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred HHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCC
Confidence 45554322 1345789999999999 888899999998764
No 443
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=93.73 E-value=0.11 Score=54.30 Aligned_cols=131 Identities=12% Similarity=0.289 Sum_probs=86.7
Q ss_pred EEEEEeCCCCceeecChHHhhcCCCCCEEEccCCcccccCCc--ccccCCCCccEEEcccCccccccChhhhcCCcccce
Q 044996 47 IWGLKLEDMGLQGNIDITILKELREMRTLSLMRNNLEGPMPD--LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRK 124 (678)
Q Consensus 47 v~~l~l~~~~l~g~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~--~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~ 124 (678)
+..+.+..+ +. .+....+.++..|+.+.+..+ ++ .|.. +..+ .+|+.+.+..+ +. .|+..+|.++++|+.
T Consensus 219 l~~i~~~~~-~~-~i~~~~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~--~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~ 290 (379)
T 4h09_A 219 LKKITITSG-VT-TLGDGAFYGMKALDEIAIPKN-VT-SIGSFLLQNC--TALKTLNFYAK-VK-TVPYLLCSGCSNLTK 290 (379)
T ss_dssp CSEEECCTT-CC-EECTTTTTTCSSCCEEEECTT-CC-EECTTTTTTC--TTCCEEEECCC-CS-EECTTTTTTCTTCCE
T ss_pred cceeeeccc-ee-EEccccccCCccceEEEcCCC-cc-EeCcccccee--ehhcccccccc-ce-ecccccccccccccc
Confidence 444444433 22 344456788899999998776 32 2222 2223 66899988654 55 678788999999999
Q ss_pred eeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc---CCCCCcEEEeecCcccccCchhhhcCCCCCCCC
Q 044996 125 LLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF---QQKDLVSFNVSNNALFGSISPALRELDPSSFSG 196 (678)
Q Consensus 125 l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~---~~~~l~~l~l~~N~l~g~ip~~~~~l~~~~~~g 196 (678)
+.|.+|.++-.-...|.++.+|+.+.|..| ++ .|... .+.+|+.+.+ |..+..+....|.|
T Consensus 291 i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~i---------p~~v~~I~~~aF~~ 354 (379)
T 4h09_A 291 VVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTISY---------PKSITLIESGAFEG 354 (379)
T ss_dssp EEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCCCC---------CTTCCEECTTTTTT
T ss_pred ccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEEEE---------CCccCEEchhHhhC
Confidence 999988887555677899999999999755 33 45442 4466776654 44444555555554
No 444
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=93.50 E-value=0.15 Score=53.50 Aligned_cols=77 Identities=18% Similarity=0.157 Sum_probs=51.3
Q ss_pred CCccEEEcccCccccccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCCcccccCCcc---CCCCCcEE
Q 044996 95 GALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGNKFEGQIPDF---QQKDLVSF 171 (678)
Q Consensus 95 ~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~---~~~~l~~l 171 (678)
.+|+.+.+.++ +. .|+..+|.++++|+.++|.++ ++-.-..+|.+|.+|+.+.|..| ++ .|... .+.+|+.+
T Consensus 297 ~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i 371 (394)
T 4fs7_A 297 SSLTEVKLLDS-VK-FIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCINLKKV 371 (394)
T ss_dssp TTCCEEEECTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTTCCEE
T ss_pred ccccccccccc-cc-eechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCCCCEE
Confidence 56777777654 54 577777888888888888644 54333556778888888888666 33 44442 45678888
Q ss_pred EeecC
Q 044996 172 NVSNN 176 (678)
Q Consensus 172 ~l~~N 176 (678)
++..|
T Consensus 372 ~lp~~ 376 (394)
T 4fs7_A 372 ELPKR 376 (394)
T ss_dssp EEEGG
T ss_pred EECCC
Confidence 77654
No 445
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=92.33 E-value=0.22 Score=51.83 Aligned_cols=104 Identities=12% Similarity=0.133 Sum_probs=74.9
Q ss_pred HhhcCCCCCEEEccCCcccccCC--cccccCCCCccEEEcccCccccccChhhhcCCcccceeeccccccccCCchhhcC
Q 044996 65 ILKELREMRTLSLMRNNLEGPMP--DLRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPESLTR 142 (678)
Q Consensus 65 ~l~~l~~L~~L~Ls~N~l~g~~p--~~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~ 142 (678)
.+.....|+.+.+..+--. +. .+..+ ..|+.+.+..+ ++ .|...+|.++.+|+.+.+..+ +.-.-...|.+
T Consensus 212 ~f~~~~~l~~i~~~~~~~~--i~~~~f~~~--~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~ 284 (379)
T 4h09_A 212 GFSYGKNLKKITITSGVTT--LGDGAFYGM--KALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSG 284 (379)
T ss_dssp TTTTCSSCSEEECCTTCCE--ECTTTTTTC--SSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CSEECTTTTTT
T ss_pred ccccccccceeeeccceeE--EccccccCC--ccceEEEcCCC-cc-EeCccccceeehhcccccccc-ceecccccccc
Confidence 4667888999888765221 22 12233 67999999776 55 677778999999999999755 44333456889
Q ss_pred CCCCCeEeccCCcccccCCcc---CCCCCcEEEeecC
Q 044996 143 LSRLVELRLEGNKFEGQIPDF---QQKDLVSFNVSNN 176 (678)
Q Consensus 143 l~~L~~l~l~~N~l~g~~p~~---~~~~l~~l~l~~N 176 (678)
+.+|+.+.+.+|.++ .|+.. .+.+|+.+.|.++
T Consensus 285 c~~L~~i~l~~~~i~-~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 285 CSNLTKVVMDNSAIE-TLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp CTTCCEEEECCTTCC-EECTTTTTTCTTCCEEECCTT
T ss_pred ccccccccccccccc-eehhhhhcCCCCCCEEEcCcc
Confidence 999999999988776 45542 5678999988644
No 446
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=92.21 E-value=0.15 Score=53.67 Aligned_cols=86 Identities=15% Similarity=0.175 Sum_probs=63.4
Q ss_pred ChHHhhcCCCCCEEEccCCcccccCCc--ccccCCCCccEEEcccCccccccChhhhcCCcccceeeccccccccCCchh
Q 044996 62 DITILKELREMRTLSLMRNNLEGPMPD--LRQLGNGALRSVYLSNNRFSGEIPTDAFDGMTSLRKLLLADNQFNGPIPES 139 (678)
Q Consensus 62 ~~~~l~~l~~L~~L~Ls~N~l~g~~p~--~~~~~~~~L~~L~Ls~N~l~G~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~ 139 (678)
+...+..+.+|+.+.+..| +. .|++ +..+ .+|+.++|.++ ++ .|...+|.++++|+.++|..| ++-.-..+
T Consensus 289 ~~~~F~~~~~L~~i~l~~~-i~-~I~~~aF~~c--~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~a 361 (394)
T 4fs7_A 289 PEKTFYGCSSLTEVKLLDS-VK-FIGEEAFESC--TSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LRKIGANA 361 (394)
T ss_dssp CTTTTTTCTTCCEEEECTT-CC-EECTTTTTTC--TTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTT
T ss_pred ccccccccccccccccccc-cc-eechhhhcCC--CCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-ccEehHHH
Confidence 3344667778888887655 22 2332 3333 67999999754 66 788888999999999999877 66444567
Q ss_pred hcCCCCCCeEeccCC
Q 044996 140 LTRLSRLVELRLEGN 154 (678)
Q Consensus 140 ~~~l~~L~~l~l~~N 154 (678)
|.+|.+|+.++|..|
T Consensus 362 F~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 362 FQGCINLKKVELPKR 376 (394)
T ss_dssp BTTCTTCCEEEEEGG
T ss_pred hhCCCCCCEEEECCC
Confidence 999999999999765
No 447
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=89.91 E-value=0.78 Score=43.33 Aligned_cols=117 Identities=9% Similarity=0.098 Sum_probs=79.4
Q ss_pred CCCCccceeEEEEeCCceEEEEeccCCC-CHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCC
Q 044996 423 RHPNLLPLVAYYYRKEEKLLVHEFVPKR-SLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQYLYRELPSLIAPHGHIK 501 (678)
Q Consensus 423 ~H~niv~l~~~~~~~~~~~lv~Ey~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~ivHrdlk 501 (678)
.||+++.. .+-...+.+.+.|+.-+.+ ++.. ++ .++...+++++..|+.-..+++. =+|--|.
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik--------~~~~~eKlr~l~ni~~l~~~~~~------r~tf~L~ 106 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK--------SFTKNEKLRYLLNIKNLEEVNRT------RYTFVLA 106 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG--------GSCHHHHHHHHHHGGGGGGGGGS------SEECCCS
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH--------hcCHHHHHHHHHHHHHHHHHhcC------ceEEEEe
Confidence 68888876 4555566666666654321 2222 22 37788999999999887766652 3477899
Q ss_pred CCCEEecCCCceEEeecCCccccCccccccccceeeCccccccCCCCCcchHHHHHHHHHHHHhCCCCcccc
Q 044996 502 SSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSPEFLQLGRITKKTDVWSLGVLILEIMTGKFPANFL 573 (678)
Q Consensus 502 ~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDvwS~Gvvl~el~tg~~P~~~~ 573 (678)
|+||++|.++.+++.-.|+-..+ +|. ..+...=.-.+=+++..+++++..|+..
T Consensus 107 P~NL~f~~~~~p~i~~RGik~~l-------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe~l 160 (215)
T 4ann_A 107 PDELFFTRDGLPIAKTRGLQNVV-------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFDAL 160 (215)
T ss_dssp GGGEEECTTSCEEESCCEETTTB-------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHHHH
T ss_pred cceEEEcCCCCEEEEEccCccCC-------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 99999999999999988874332 221 1222222445778899999999999843
No 448
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=89.42 E-value=0.65 Score=48.83 Aligned_cols=29 Identities=24% Similarity=0.400 Sum_probs=24.4
Q ss_pred CCcccCCCCCCEEe------cCCCceEEeecCCcc
Q 044996 494 IAPHGHIKSSNVLL------NESLEPVLADYGLIP 522 (678)
Q Consensus 494 ~ivHrdlk~~NILl------~~~~~~kl~DfGla~ 522 (678)
.++|+|+.+.|||+ +++..++++||-+|.
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 46799999999999 456789999998764
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=87.24 E-value=2 Score=40.72 Aligned_cols=115 Identities=12% Similarity=0.125 Sum_probs=77.1
Q ss_pred CCCCccceeEEEEeCCceEEEEeccCCCCHHHHhhccCCCCCCCCChHHHHHHHHHHHHHHH-HHHHhCCCCCCcccCCC
Q 044996 423 RHPNLLPLVAYYYRKEEKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSRLKIVKGVAKGLQ-YLYRELPSLIAPHGHIK 501 (678)
Q Consensus 423 ~H~niv~l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~-yLH~~~~~~~ivHrdlk 501 (678)
.||++ -..+-.+.+...+.|+.-+++.=...++ .++...+++++..|+.-.. +++ .-+|--|.
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~--------~~~~~eKlrll~nl~~L~~~~~~------~r~tf~l~ 111 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR--------KTTLLSRIRAAIHLVSKVKHHSA------RRLIFIVC 111 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH--------TSCHHHHHHHHHHHHHHHSSCCS------SSEECCCC
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH--------hcCHHHHHHHHHHHHHHHHHhhh------CceeEEEe
Confidence 57777 3344456677777777654432223332 3778889999988876555 444 34578899
Q ss_pred CCCEEecCCCceEEeecCCccccCccccccccceeeCccccccCCCCCcch-HHHHHHHHHHHHhCCCCccc
Q 044996 502 SSNVLLNESLEPVLADYGLIPVMNQESAQELMIAYKSPEFLQLGRITKKTD-VWSLGVLILEIMTGKFPANF 572 (678)
Q Consensus 502 ~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksD-vwS~Gvvl~el~tg~~P~~~ 572 (678)
|+||++|.++.+++.-.|+-.. ++|.- .+ ..| .-.+=+++..++.++..|+.
T Consensus 112 P~NL~f~~~~~p~i~hRGi~~~-------------lpP~e-----~~-ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 112 PENLMFNRALEPFFLHVGVKES-------------LPPDE-----WD-DERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp GGGEEECTTCCEEESCCEETTT-------------BSSCS-----CC-HHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred CceEEEeCCCcEEEEEcCCccc-------------CCCCC-----CC-HHHHHHHHHHHHHHHHcCCCCHHH
Confidence 9999999999999998887332 23321 11 223 33577888899999988873
No 450
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=84.76 E-value=0.33 Score=32.99 Aligned_cols=8 Identities=13% Similarity=0.355 Sum_probs=3.2
Q ss_pred heeeeecc
Q 044996 296 IFVIERKR 303 (678)
Q Consensus 296 ~~~~~r~r 303 (678)
++++|||+
T Consensus 32 ~~~~RRr~ 39 (44)
T 2ks1_B 32 GLFMRRRH 39 (44)
T ss_dssp HHHHHTTT
T ss_pred HHHhhhhH
Confidence 34444433
No 451
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=83.84 E-value=0.34 Score=32.86 Aligned_cols=8 Identities=25% Similarity=0.393 Sum_probs=3.2
Q ss_pred heeeeecc
Q 044996 296 IFVIERKR 303 (678)
Q Consensus 296 ~~~~~r~r 303 (678)
++++||||
T Consensus 31 ~~~~RRRr 38 (44)
T 2l2t_A 31 AVYVRRKS 38 (44)
T ss_dssp HHHHHTTC
T ss_pred HHHhhhhh
Confidence 34444433
No 452
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=78.55 E-value=0.33 Score=52.22 Aligned_cols=59 Identities=7% Similarity=0.020 Sum_probs=16.7
Q ss_pred cccCccCceeEEEEEecC-CceEEE------EEeccc--ChhhHHHHHHHHHHHhccCCCCccceeEEEEe
Q 044996 375 EILGSGCFGSSYKASLST-GAMMVV------KRFKQM--NNVGREEFQEHMRRLGRLRHPNLLPLVAYYYR 436 (678)
Q Consensus 375 ~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~ 436 (678)
+.|| ||.||+|.+.. ...||| |..+.. .......|.+|..+++.++|||+++.+++...
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 4566 99999998754 356777 665542 22334568889999999999999999887643
No 453
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=73.79 E-value=0.6 Score=31.59 Aligned_cols=7 Identities=29% Similarity=0.805 Sum_probs=2.7
Q ss_pred eeeeecc
Q 044996 297 FVIERKR 303 (678)
Q Consensus 297 ~~~~r~r 303 (678)
++.||||
T Consensus 33 ~~~RRR~ 39 (44)
T 2jwa_A 33 ILIKRRQ 39 (44)
T ss_dssp HHHHHHC
T ss_pred hheehhh
Confidence 3334333
No 454
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=43.59 E-value=2.7e+02 Score=30.40 Aligned_cols=46 Identities=24% Similarity=0.226 Sum_probs=33.3
Q ss_pred hHHHHHHHHHHHH--HHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCcc
Q 044996 469 WPSRLKIVKGVAK--GLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIP 522 (678)
Q Consensus 469 ~~~~~~i~~~ia~--gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 522 (678)
|..+..+++..|- -+.|+- + =+|=.++|||||.+|++.=+|||.+-
T Consensus 454 ~~a~~nF~~S~A~ySvv~YIL------G--igDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYIL------G--VGDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH------T--CCCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheee------e--ccCCCCcceeEcCCCCEeeeehHHhh
Confidence 5556666665543 344554 3 36778999999999999999999863
No 455
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=41.14 E-value=9 Score=25.94 Aligned_cols=13 Identities=23% Similarity=0.036 Sum_probs=6.7
Q ss_pred hheeeeecccccc
Q 044996 295 AIFVIERKRKRER 307 (678)
Q Consensus 295 ~~~~~~r~r~~~~ 307 (678)
+..++.-.|+++.
T Consensus 28 ~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 28 ALGIGLFMRRRHI 40 (44)
T ss_dssp HHHHHHHHHTTTC
T ss_pred HHHHHHHhhhhHh
Confidence 3455555555543
No 456
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=27.91 E-value=2.1e+02 Score=28.59 Aligned_cols=77 Identities=18% Similarity=0.169 Sum_probs=43.1
Q ss_pred ceEEEEeccCCCCHHHHhhccCCCCCCCCChHHH--HHHHHHH--HHHHHHHHHhCCCCCCcc-cCCCCCCEEecCCCc-
Q 044996 439 EKLLVHEFVPKRSLAVNLHGHQALGQPSLDWPSR--LKIVKGV--AKGLQYLYRELPSLIAPH-GHIKSSNVLLNESLE- 512 (678)
Q Consensus 439 ~~~lv~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~--~~i~~~i--a~gL~yLH~~~~~~~ivH-rdlk~~NILl~~~~~- 512 (678)
..+++|||.++..|.+.-+ ..|... .+.+.++ .-++.++.++......+. .--.+.|||++++..
T Consensus 156 ~~~l~meyv~G~~L~e~~~---------~~~~~~f~~~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~ 226 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTT---------TSAPEVLTKSTMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGAT 226 (342)
T ss_dssp SEEEEEECCCEEESTTCCS---------SSHHHHSCHHHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTC
T ss_pred cceehhhhcCCCccccchh---------hhhhhhcCHHHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCe
Confidence 4569999998655432211 112221 1233332 345666666543222222 235789999987554
Q ss_pred eEEeecCCcccc
Q 044996 513 PVLADYGLIPVM 524 (678)
Q Consensus 513 ~kl~DfGla~~~ 524 (678)
+.++|-+++..-
T Consensus 227 ~~~IDhn~af~~ 238 (342)
T 1cja_A 227 VVPIDSKIIPLD 238 (342)
T ss_dssp EEECSCCCCCCC
T ss_pred EEEEcCCccccC
Confidence 889999987553
No 457
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=27.32 E-value=6.7e+02 Score=27.77 Aligned_cols=45 Identities=24% Similarity=0.250 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHH--HHHHHHHhCCCCCCcccCCCCCCEEecCCCceEEeecCCcc
Q 044996 470 PSRLKIVKGVAK--GLQYLYRELPSLIAPHGHIKSSNVLLNESLEPVLADYGLIP 522 (678)
Q Consensus 470 ~~~~~i~~~ia~--gL~yLH~~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 522 (678)
..+..+++.+|- -+.|+- + =+|=.++|||||++|.+.-+|||.+-
T Consensus 529 ~ar~nF~~SlA~~Svv~YIL------G--lGDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLL------G--VGDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHH------T--CCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHc------c--CCCCCCcceEEeCCCCEEEEeehhhh
Confidence 345556655542 234443 2 47889999999999999999999863
No 458
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=26.02 E-value=59 Score=26.18 Aligned_cols=44 Identities=20% Similarity=0.283 Sum_probs=27.3
Q ss_pred ccChhhhcCCcccceeeccccccccCCchhhcCCCCCCeEeccCC
Q 044996 110 EIPTDAFDGMTSLRKLLLADNQFNGPIPESLTRLSRLVELRLEGN 154 (678)
Q Consensus 110 ~ip~~~~~~l~~L~~l~l~~N~~~g~~p~~~~~l~~L~~l~l~~N 154 (678)
.|-..+|.++++|+.+.|..+ ++-.--..|.+|.+|+.+.+...
T Consensus 10 ~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 10 GMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp SSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred EecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 455566777888888877654 33233445667777777766543
Done!