BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044997
(563 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 75/311 (24%)
Query: 282 FSLEEIEEATNNFDESRI------IGRGGFGNVYFGLLGDREAAIKKMRS-------NKS 328
FS E++ TNNFDE I +G GGFG VY G + + A+KK+ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 329 KEFFAELKVLCKIHHINVF----ISTFG-----------NGSLSDHLHDPLLKGHQPLTW 373
++F E+KV+ K H N+ S+ G NGSL D L L G PL+W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSW 132
Query: 374 TARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEK 433
R +IA AA GI ++H++ ++HRDIK++NILLD+ AK++DFGL + E+ +
Sbjct: 133 HMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 434 EMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRAL 493
++ +R+VGT Y+ PE + ++T K+D+++FGVVL E+ITG A
Sbjct: 190 -VMXSRIVGTTAYMAPE--------------ALRGEITPKSDIYSFGVVLLEIITGLPA- 233
Query: 494 IRDDSEPT----------------------KMK----SLITIMAAVAEWCLNEDAVDRPE 527
+ + EP KM + + M +VA CL+E RP+
Sbjct: 234 VDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPD 293
Query: 528 MRDIVAILSQI 538
++ + +L ++
Sbjct: 294 IKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 154/311 (49%), Gaps = 75/311 (24%)
Query: 282 FSLEEIEEATNNFDESRI------IGRGGFGNVYFGLLGDREAAIKKMRS-------NKS 328
FS E++ TNNFDE I +G GGFG VY G + + A+KK+ +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 329 KEFFAELKVLCKIHHINVF----ISTFG-----------NGSLSDHLHDPLLKGHQPLTW 373
++F E+KV+ K H N+ S+ G NGSL D L L G PL+W
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSW 126
Query: 374 TARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEK 433
R +IA AA GI ++H++ ++HRDIK++NILLD+ AK++DFGL + E+ +
Sbjct: 127 HMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKF-AQ 182
Query: 434 EMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRAL 493
++ R+VGT Y+ PE + ++T K+D+++FGVVL E+ITG A
Sbjct: 183 XVMXXRIVGTTAYMAPE--------------ALRGEITPKSDIYSFGVVLLEIITGLPA- 227
Query: 494 IRDDSEPT----------------------KMK----SLITIMAAVAEWCLNEDAVDRPE 527
+ + EP KM + + M +VA CL+E RP+
Sbjct: 228 VDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPD 287
Query: 528 MRDIVAILSQI 538
++ + +L ++
Sbjct: 288 IKKVQQLLQEM 298
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 154/311 (49%), Gaps = 75/311 (24%)
Query: 282 FSLEEIEEATNNFDESRI------IGRGGFGNVYFGLLGDREAAIKKMRS-------NKS 328
FS E++ TNNFDE I +G GGFG VY G + + A+KK+ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 329 KEFFAELKVLCKIHHINVF----ISTFG-----------NGSLSDHLHDPLLKGHQPLTW 373
++F E+KV+ K H N+ S+ G NGSL D L L G PL+W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSW 132
Query: 374 TARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEK 433
R +IA AA GI ++H++ ++HRDIK++NILLD+ AK++DFGL + E+ +
Sbjct: 133 HMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 434 EMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRAL 493
++ R+VGT Y+ PE + ++T K+D+++FGVVL E+ITG A
Sbjct: 190 -VMXXRIVGTTAYMAPE--------------ALRGEITPKSDIYSFGVVLLEIITGLPA- 233
Query: 494 IRDDSEPT----------------------KMK----SLITIMAAVAEWCLNEDAVDRPE 527
+ + EP KM + + M +VA CL+E RP+
Sbjct: 234 VDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPD 293
Query: 528 MRDIVAILSQI 538
++ + +L ++
Sbjct: 294 IKKVQQLLQEM 304
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 149/304 (49%), Gaps = 65/304 (21%)
Query: 282 FSLEEIEEATNNFDESRIIGRGGFGNVYFGLLGDRE-AAIKKMRSNKSK----EFFAELK 336
FSL E++ A++NF I+GRGGFG VY G L D A+K+++ + + +F E++
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 337 VLCKIHHINVF---------------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIAL 381
++ H N+ NGS++ L + + PL W R +IAL
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE-RPESQPPLDWPKRQRIAL 146
Query: 382 DAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLV 441
+A+G+ Y+HDH + +HRD+K +NILLD+ A V DFGL KL + + A R
Sbjct: 147 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR-- 204
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRA-----LIRD 496
GT G++ PEY+ + + KTDVF +GV+L ELITG+RA L D
Sbjct: 205 GTIGHIAPEYLSTGK-------------SSEKTDVFGYGVMLLELITGQRAFDLARLAND 251
Query: 497 DS-----------EPTKMKSLITI-------------MAAVAEWCLNEDAVDRPEMRDIV 532
D + K+++L+ + + VA C ++RP+M ++V
Sbjct: 252 DDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 311
Query: 533 AILS 536
+L
Sbjct: 312 RMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 152/305 (49%), Gaps = 67/305 (21%)
Query: 282 FSLEEIEEATNNFDESRIIGRGGFGNVYFGLLGDRE-AAIKKMRSNKSK----EFFAELK 336
FSL E++ A++NF I+GRGGFG VY G L D A+K+++ +++ +F E++
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 337 VLCKIHHINV-----FIST----------FGNGSLSDHLHD-PLLKGHQPLTWTARTQIA 380
++ H N+ F T NGS++ L + P + PL W R +IA
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP--ESQPPLDWPKRQRIA 137
Query: 381 LDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRL 440
L +A+G+ Y+HDH + +HRD+K +NILLD+ A V DFGL KL + + A R
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR- 196
Query: 441 VGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRA-----LIR 495
G G++ PEY+ + + KTDVF +GV+L ELITG+RA L
Sbjct: 197 -GXIGHIAPEYLSTGK-------------SSEKTDVFGYGVMLLELITGQRAFDLARLAN 242
Query: 496 DDS-----------EPTKMKSLITI-------------MAAVAEWCLNEDAVDRPEMRDI 531
DD + K+++L+ + + VA C ++RP+M ++
Sbjct: 243 DDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 302
Query: 532 VAILS 536
V +L
Sbjct: 303 VRMLE 307
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 148/310 (47%), Gaps = 75/310 (24%)
Query: 282 FSLEEIEEATNNFDESRI------IGRGGFGNVYFGLLGDREAAIKKMRS-------NKS 328
FS E++ TNNFDE I G GGFG VY G + + A+KK+ +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 329 KEFFAELKVLCKIHHINVF----ISTFG-----------NGSLSDHLHDPLLKGHQPLTW 373
++F E+KV K H N+ S+ G NGSL D L L G PL+W
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL--SCLDGTPPLSW 123
Query: 374 TARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEK 433
R +IA AA GI ++H++ ++HRDIK++NILLD+ AK++DFGL + E+ +
Sbjct: 124 HXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKF-AQ 179
Query: 434 EMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRAL 493
+ +R+VGT Y PE + ++T K+D+++FGVVL E+ITG A
Sbjct: 180 XVXXSRIVGTTAYXAPE--------------ALRGEITPKSDIYSFGVVLLEIITGLPA- 224
Query: 494 IRDDSEPTKM--------------------------KSLITIMAAVAEWCLNEDAVDRPE 527
+ + EP + + + +VA CL+E RP+
Sbjct: 225 VDEHREPQLLLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPD 284
Query: 528 MRDIVAILSQ 537
++ + +L +
Sbjct: 285 IKKVQQLLQE 294
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 126/254 (49%), Gaps = 46/254 (18%)
Query: 284 LEEIEEATNNFDESRIIGRGGFGNVYFGLLGDREAAIKKMRSNKSKE------------- 330
L ++EEATNNFD +IG G FG VY G+L D K R+ +S +
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 331 -----FFAELKVLCKIHHINVFISTF-GNGSLSDHLHDPLLKGHQPLTWTARTQIALDAA 384
L C + + I + NG+L HL+ L ++W R +I + AA
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPT-MSMSWEQRLEICIGAA 149
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
+G+ Y+ HT+A +HRD+K+ NILLD+ K+ DFG+ K ++ + + GT
Sbjct: 150 RGLHYL--HTRA-IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXV-VKGTL 205
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMK 504
GY+ PEY F+K ++T K+DV++FGVVL E++ + A++ +
Sbjct: 206 GYIDPEY-FIKG------------RLTEKSDVYSFGVVLFEVLCARSAIV---------Q 243
Query: 505 SLITIMAAVAEWCL 518
SL M +AEW +
Sbjct: 244 SLPREMVNLAEWAV 257
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 125/254 (49%), Gaps = 46/254 (18%)
Query: 284 LEEIEEATNNFDESRIIGRGGFGNVYFGLLGDREAAIKKMRSNKSKE------------- 330
L ++EEATNNFD +IG G FG VY G+L D K R+ +S +
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 331 -----FFAELKVLCKIHHINVFISTF-GNGSLSDHLHDPLLKGHQPLTWTARTQIALDAA 384
L C + + I + NG+L HL+ L ++W R +I + AA
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPT-MSMSWEQRLEICIGAA 149
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
+G+ Y+ HT+A +HRD+K+ NILLD+ K+ DFG+ K + + + GT
Sbjct: 150 RGLHYL--HTRA-IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXV-VKGTL 205
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMK 504
GY+ PEY F+K ++T K+DV++FGVVL E++ + A++ +
Sbjct: 206 GYIDPEY-FIKG------------RLTEKSDVYSFGVVLFEVLCARSAIV---------Q 243
Query: 505 SLITIMAAVAEWCL 518
SL M +AEW +
Sbjct: 244 SLPREMVNLAEWAV 257
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 121/273 (44%), Gaps = 57/273 (20%)
Query: 299 IIGRGGFGNVYFGLLGDREAAIKKMRS-NKSKEFFAELKVLCKIHHINVFISTFG----- 352
++GRG FG V ++ AIK++ S ++ K F EL+ L +++H N+ + +G
Sbjct: 16 VVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNI-VKLYGACLNP 74
Query: 353 ---------NGSLSDHLHDPLLKGHQPLTWTARTQI---ALDAAKGIEYIHDHTKARYVH 400
GSL + LH G +PL + L ++G+ Y+H +H
Sbjct: 75 VCLVMEYAEGGSLYNVLH-----GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 129
Query: 401 RDIKTSNILL-DDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
RD+K N+LL G K+ DFG + + T G+ ++ PE +
Sbjct: 130 RDLKPPNLLLVAGGTVLKICDFGT------ACDIQTHMTNNKGSAAWMAPEVFEGSNY-- 181
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGKRAL-------------IRDDSEPTKMKSL 506
+ K DVF++G++L E+IT ++ + + + P +K+L
Sbjct: 182 -----------SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNL 230
Query: 507 ITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIM 539
+ ++ C ++D RP M +IV I++ +M
Sbjct: 231 PKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 263
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 121/273 (44%), Gaps = 57/273 (20%)
Query: 299 IIGRGGFGNVYFGLLGDREAAIKKMRS-NKSKEFFAELKVLCKIHHINVFISTFG----- 352
++GRG FG V ++ AIK++ S ++ K F EL+ L +++H N+ + +G
Sbjct: 15 VVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNI-VKLYGACLNP 73
Query: 353 ---------NGSLSDHLHDPLLKGHQPLTWTARTQI---ALDAAKGIEYIHDHTKARYVH 400
GSL + LH G +PL + L ++G+ Y+H +H
Sbjct: 74 VCLVMEYAEGGSLYNVLH-----GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 128
Query: 401 RDIKTSNILL-DDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
RD+K N+LL G K+ DFG + + T G+ ++ PE +
Sbjct: 129 RDLKPPNLLLVAGGTVLKICDFGT------ACDIQTHMTNNKGSAAWMAPEVFEGSNY-- 180
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGKRAL-------------IRDDSEPTKMKSL 506
+ K DVF++G++L E+IT ++ + + + P +K+L
Sbjct: 181 -----------SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNL 229
Query: 507 ITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIM 539
+ ++ C ++D RP M +IV I++ +M
Sbjct: 230 PKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 125/298 (41%), Gaps = 76/298 (25%)
Query: 290 ATNNFDESRIIGRGGFGNVYFG--------------LLGDREAAIKKMRSNKSKEFFAEL 335
A N + + IG+GGFG V+ G +LGD E + + K +EF E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE--KFQEFQREV 74
Query: 336 KVLCKIHHINVFISTFGNGSLSDHLHDP----------------LLKGHQPLTWTARTQI 379
++ ++H N+ L +H+P LL P+ W+ + ++
Sbjct: 75 FIMSNLNHPNIV-------KLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRL 127
Query: 380 ALDAAKGIEYIHDHTKARYVHRDIKTSNILL-----DDGLRAKVADFGLVKLEERTNEKE 434
LD A GIEY+ + VHRD+++ NI L + + AKVADFGL + +
Sbjct: 128 MLDIALGIEYMQNQNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADFGL------SQQSV 180
Query: 435 MLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRA-- 492
+ L+G ++ PE I E T K D ++F ++L ++TG+
Sbjct: 181 HSVSGLLGNFQWMAPETI-----------GAEEESYTEKADTYSFAMILYTILTGEGPFD 229
Query: 493 -----------LIRDDS-EPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+IR++ PT + + V E C + D RP IV LS++
Sbjct: 230 EYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 118/282 (41%), Gaps = 67/282 (23%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR--SNKSKEFFAELKVLCKIHH------------- 343
+G G FG V+ G G + A+K ++ S F AE ++ ++ H
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 89
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + NGSL D L P LT +A A+G+ +I + Y+HRD
Sbjct: 90 PIYIITEYMENGSLVDFLKTP---SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 143
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDM 461
++ +NIL+ D L K+ADFGL +L E + E A P + PE I F
Sbjct: 144 LRAANILVSDTLSCKIADFGLARLIE---DNEXTAREGAKFPIKWTAPEAINYGTF---- 196
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELITGKR-------------------ALIRDDSEPTK 502
T K+DV++FG++L E++T R ++R D+ P +
Sbjct: 197 ---------TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE 247
Query: 503 MKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITSTE 544
+ L+ + C E DRP + ++L T+TE
Sbjct: 248 LYQLMRL-------CWKERPEDRPTFDYLRSVLEDF-FTATE 281
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 118/282 (41%), Gaps = 67/282 (23%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR--SNKSKEFFAELKVLCKIHH------------- 343
+G G FG V+ G G + A+K ++ S F AE ++ ++ H
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 88
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + NGSL D L P LT +A A+G+ +I + Y+HRD
Sbjct: 89 PIYIITEYMENGSLVDFLKTP---SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 142
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDM 461
++ +NIL+ D L K+ADFGL +L E + E A P + PE I F
Sbjct: 143 LRAANILVSDTLSCKIADFGLARLIE---DNEXTAREGAKFPIKWTAPEAINYGTF---- 195
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELITGKR-------------------ALIRDDSEPTK 502
T K+DV++FG++L E++T R ++R D+ P +
Sbjct: 196 ---------TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE 246
Query: 503 MKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITSTE 544
+ L+ + C E DRP + ++L T+TE
Sbjct: 247 LYQLMRL-------CWKERPEDRPTFDYLRSVLEDF-FTATE 280
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 118/282 (41%), Gaps = 67/282 (23%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR--SNKSKEFFAELKVLCKIHH------------- 343
+G G FG V+ G G + A+K ++ S F AE ++ ++ H
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 90
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + NGSL D L P LT +A A+G+ +I + Y+HRD
Sbjct: 91 PIYIITEYMENGSLVDFLKTP---SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 144
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDM 461
++ +NIL+ D L K+ADFGL +L E + E A P + PE I F
Sbjct: 145 LRAANILVSDTLSCKIADFGLARLIE---DNEYTAREGAKFPIKWTAPEAINYGTF---- 197
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELITGKR-------------------ALIRDDSEPTK 502
T K+DV++FG++L E++T R ++R D+ P +
Sbjct: 198 ---------TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE 248
Query: 503 MKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITSTE 544
+ L+ + C E DRP + ++L T+TE
Sbjct: 249 LYQLMRL-------CWKERPEDRPTFDYLRSVLEDF-FTATE 282
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 118/282 (41%), Gaps = 67/282 (23%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR--SNKSKEFFAELKVLCKIHH------------- 343
+G G FG V+ G G + A+K ++ S F AE ++ ++ H
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + NGSL D L P LT +A A+G+ +I + Y+HRD
Sbjct: 81 PIYIITEYMENGSLVDFLKTP---SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 134
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDM 461
++ +NIL+ D L K+ADFGL +L E + E A P + PE I F
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIE---DNEXTAREGAKFPIKWTAPEAINYGTF---- 187
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELITGKR-------------------ALIRDDSEPTK 502
T K+DV++FG++L E++T R ++R D+ P +
Sbjct: 188 ---------TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE 238
Query: 503 MKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITSTE 544
+ L+ + C E DRP + ++L T+TE
Sbjct: 239 LYQLMRL-------CWKERPEDRPTFDYLRSVLEDF-FTATE 272
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 118/282 (41%), Gaps = 67/282 (23%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR--SNKSKEFFAELKVLCKIHH------------- 343
+G G FG V+ G G + A+K ++ S F AE ++ ++ H
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 85
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + NGSL D L P LT +A A+G+ +I + Y+HRD
Sbjct: 86 PIYIITEYMENGSLVDFLKTP---SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 139
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDM 461
++ +NIL+ D L K+ADFGL +L E + E A P + PE I F
Sbjct: 140 LRAANILVSDTLSCKIADFGLARLIE---DNEYTAREGAKFPIKWTAPEAINYGTF---- 192
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELITGKR-------------------ALIRDDSEPTK 502
T K+DV++FG++L E++T R ++R D+ P +
Sbjct: 193 ---------TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE 243
Query: 503 MKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITSTE 544
+ L+ + C E DRP + ++L T+TE
Sbjct: 244 LYQLMRL-------CWKERPEDRPTFDYLRSVLEDF-FTATE 277
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 118/282 (41%), Gaps = 67/282 (23%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR--SNKSKEFFAELKVLCKIHH------------- 343
+G G FG V+ G G + A+K ++ S F AE ++ ++ H
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 86
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + NGSL D L P LT +A A+G+ +I + Y+HRD
Sbjct: 87 PIYIITEYMENGSLVDFLKTP---SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 140
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDM 461
++ +NIL+ D L K+ADFGL +L E + E A P + PE I F
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIE---DNEXTAREGAKFPIKWTAPEAINYGTF---- 193
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELITGKR-------------------ALIRDDSEPTK 502
T K+DV++FG++L E++T R ++R D+ P +
Sbjct: 194 ---------TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE 244
Query: 503 MKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITSTE 544
+ L+ + C E DRP + ++L T+TE
Sbjct: 245 LYQLMRL-------CWKERPEDRPTFDYLRSVLEDF-FTATE 278
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 119/278 (42%), Gaps = 57/278 (20%)
Query: 300 IGRGGFGNVYFGLLGDREAAIK-----KMRSNKSKEFFAELKVLCKIHHINVFI------ 348
IG G FG V+ + A+K + + EF E+ ++ ++ H N+ +
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT 104
Query: 349 ---------STFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
GSL LH + L R +A D AKG+ Y+H+ V
Sbjct: 105 QPPNLSIVTEYLSRGSLYRLLHKS--GAREQLDERRRLSMAYDVAKGMNYLHNRNPP-IV 161
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATR-LVGTPGYLPPEYIFVKRFR 458
HR++K+ N+L+D KV DFGL +L+ T L+++ GTP ++ PE +
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRLKAST----FLSSKSAAGTPEWMAPEVL------ 211
Query: 459 FDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKM--------------K 504
+ K+DV++FGV+L EL T ++ + P ++ +
Sbjct: 212 -------RDEPSNEKSDVYSFGVILWELATLQQPW--GNLNPAQVVAAVGFKCKRLEIPR 262
Query: 505 SLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITS 542
+L +AA+ E C + RP I+ +L ++ ++
Sbjct: 263 NLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 40/210 (19%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMRSN--KSKEFFAELKVLCKIHH------------- 343
+G G FG V+ G G+ + AIK ++ + F E +++ K+ H
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEE 76
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + GSL D L D + L +A A G+ YI + Y+HRD
Sbjct: 77 PIYIVTEYMNKGSLLDFLKD---GEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRD 130
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDM 461
++++NIL+ +GL K+ADFGL +L E + E A + P + PE RF
Sbjct: 131 LRSANILVGNGLICKIADFGLARLIE---DNEXTARQGAKFPIKWTAPEAALYGRF---- 183
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELITGKR 491
T K+DV++FG++L EL+T R
Sbjct: 184 ---------TIKSDVWSFGILLTELVTKGR 204
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 116/277 (41%), Gaps = 55/277 (19%)
Query: 300 IGRGGFGNVYFGLLGDREAAIK-----KMRSNKSKEFFAELKVLCKIHHINVFI------ 348
IG G FG V+ + A+K + + EF E+ ++ ++ H N+ +
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT 104
Query: 349 ---------STFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
GSL LH + L R +A D AKG+ Y+H+ V
Sbjct: 105 QPPNLSIVTEYLSRGSLYRLLHKS--GAREQLDERRRLSMAYDVAKGMNYLHNRNPP-IV 161
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K+ N+L+D KV DFGL +L+ + + GTP ++ PE +
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRLKA---SXFLXSKXAAGTPEWMAPEVL------- 211
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKM--------------KS 505
+ K+DV++FGV+L EL T ++ + P ++ ++
Sbjct: 212 ------RDEPSNEKSDVYSFGVILWELATLQQPW--GNLNPAQVVAAVGFKCKRLEIPRN 263
Query: 506 LITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITS 542
L +AA+ E C + RP I+ +L ++ ++
Sbjct: 264 LNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 55/232 (23%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR-EAAIKKMRSNKSKE----FFAELKVLCKI-H 342
N+ +IG G FG V + G R +AAIK+M+ SK+ F EL+VLCK+ H
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 343 HINVF---------------ISTFGNGSLSDHLH-------DPLLKGHQPLTWTARTQ-- 378
H N+ I +G+L D L DP T +Q
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 379 --IALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEML 436
A D A+G++Y+ ++ +++HRD+ NIL+ + AK+ADFGL + +E +K M
Sbjct: 135 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM- 190
Query: 437 ATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
G LP ++ ++ + ++ TT +DV+++GV+L E+++
Sbjct: 191 --------GRLPVRWMAIESLNYSVY--------TTNSDVWSYGVLLWEIVS 226
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 115/280 (41%), Gaps = 66/280 (23%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR--SNKSKEFFAELKVLCKIHH------------- 343
+G G FG V+ G G + A+K ++ S F AE ++ ++ H
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 81
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + NGSL D L P LT +A A+G+ +I + Y+HRD
Sbjct: 82 PIYIITEYMENGSLVDFLKTP---SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 135
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDM 461
++ +NIL+ D L K+ADFGL +L E + E A P + PE I F
Sbjct: 136 LRAANILVSDTLSCKIADFGLARLIE---DNEXTAREGAKFPIKWTAPEAINYGTF---- 188
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELITGKR-------------------ALIRDDSEPTK 502
T K+DV++FG++L E++T R ++R D+ P +
Sbjct: 189 ---------TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE 239
Query: 503 MKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITS 542
+ L+ + C E DRP + ++L +
Sbjct: 240 LYQLMRL-------CWKERPEDRPTFDYLRSVLEDFFTAT 272
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 115/280 (41%), Gaps = 66/280 (23%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR--SNKSKEFFAELKVLCKIHH------------- 343
+G G FG V+ G G + A+K ++ S F AE ++ ++ H
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 86
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + NGSL D L P LT +A A+G+ +I + Y+HRD
Sbjct: 87 PIYIITEYMENGSLVDFLKTP---SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 140
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDM 461
++ +NIL+ D L K+ADFGL +L E + E A P + PE I F
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIE---DNEYTAREGAKFPIKWTAPEAINYGTF---- 193
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELITGKR-------------------ALIRDDSEPTK 502
T K+DV++FG++L E++T R ++R D+ P +
Sbjct: 194 ---------TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE 244
Query: 503 MKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITS 542
+ L+ + C E DRP + ++L +
Sbjct: 245 LYQLMRL-------CWKERPEDRPTFDYLRSVLEDFFTAT 277
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 115/280 (41%), Gaps = 66/280 (23%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR--SNKSKEFFAELKVLCKIHH------------- 343
+G G FG V+ G G + A+K ++ S F AE ++ ++ H
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 82
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + NGSL D L P LT +A A+G+ +I + Y+HRD
Sbjct: 83 PIYIITEYMENGSLVDFLKTP---SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 136
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDM 461
++ +NIL+ D L K+ADFGL +L E + E A P + PE I F
Sbjct: 137 LRAANILVSDTLSCKIADFGLARLIE---DNEXTAREGAKFPIKWTAPEAINYGTF---- 189
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELITGKR-------------------ALIRDDSEPTK 502
T K+DV++FG++L E++T R ++R D+ P +
Sbjct: 190 ---------TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE 240
Query: 503 MKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITS 542
+ L+ + C E DRP + ++L +
Sbjct: 241 LYQLMRL-------CWKERPEDRPTFDYLRSVLEDFFTAT 273
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 55/232 (23%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR-EAAIKKMRSNKSKE----FFAELKVLCKI-H 342
N+ +IG G FG V + G R +AAIK+M+ SK+ F EL+VLCK+ H
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 343 HINVF---------------ISTFGNGSLSDHLH-------DPLLKGHQPLTWTARTQ-- 378
H N+ I +G+L D L DP T +Q
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 379 --IALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEML 436
A D A+G++Y+ ++ +++HRD+ NIL+ + AK+ADFGL + +E +K M
Sbjct: 145 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM- 200
Query: 437 ATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
G LP ++ ++ + ++ TT +DV+++GV+L E+++
Sbjct: 201 --------GRLPVRWMAIESLNYSVY--------TTNSDVWSYGVLLWEIVS 236
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 115/280 (41%), Gaps = 66/280 (23%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR--SNKSKEFFAELKVLCKIHH------------- 343
+G G FG V+ G G + A+K ++ S F AE ++ ++ H
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + NGSL D L P LT +A A+G+ +I + Y+HRD
Sbjct: 81 PIYIITEYMENGSLVDFLKTP---SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 134
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDM 461
++ +NIL+ D L K+ADFGL +L E + E A P + PE I F
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIE---DNEYTAREGAKFPIKWTAPEAINYGTF---- 187
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELITGKR-------------------ALIRDDSEPTK 502
T K+DV++FG++L E++T R ++R D+ P +
Sbjct: 188 ---------TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE 238
Query: 503 MKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITS 542
+ L+ + C E DRP + ++L +
Sbjct: 239 LYQLMRL-------CWKERPEDRPTFDYLRSVLEDFFTAT 271
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 115/280 (41%), Gaps = 66/280 (23%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR--SNKSKEFFAELKVLCKIHH------------- 343
+G G FG V+ G G + A+K ++ S F AE ++ ++ H
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + NGSL D L P LT +A A+G+ +I + Y+HRD
Sbjct: 81 PIYIITEYMENGSLVDFLKTP---SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 134
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDM 461
++ +NIL+ D L K+ADFGL +L E + E A P + PE I F
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIE---DNEXTAREGAKFPIKWTAPEAINYGTF---- 187
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELITGKR-------------------ALIRDDSEPTK 502
T K+DV++FG++L E++T R ++R D+ P +
Sbjct: 188 ---------TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE 238
Query: 503 MKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITS 542
+ L+ + C E DRP + ++L +
Sbjct: 239 LYQLMRL-------CWKERPEDRPTFDYLRSVLEDFFTAT 271
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 114/273 (41%), Gaps = 66/273 (24%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR--SNKSKEFFAELKVLCKIHH------------- 343
+G G FG V+ G G + A+K ++ S F AE ++ ++ H
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 75
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + NGSL D L P LT +A A+G+ +I + Y+HRD
Sbjct: 76 PIYIITEYMENGSLVDFLKTP---SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 129
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDM 461
++ +NIL+ D L K+ADFGL +L E + E A P + PE I F
Sbjct: 130 LRAANILVSDTLSCKIADFGLARLIE---DNEYTAREGAKFPIKWTAPEAINYGTF---- 182
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELITGKR-------------------ALIRDDSEPTK 502
T K+DV++FG++L E++T R ++R D+ P +
Sbjct: 183 ---------TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE 233
Query: 503 MKSLITIMAAVAEWCLNEDAVDRPEMRDIVAIL 535
+ L+ + C E DRP + ++L
Sbjct: 234 LYQLMRL-------CWKERPEDRPTFDYLRSVL 259
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 124/298 (41%), Gaps = 76/298 (25%)
Query: 290 ATNNFDESRIIGRGGFGNVYFG--------------LLGDREAAIKKMRSNKSKEFFAEL 335
A N + + IG+GGFG V+ G +LGD E + + K +EF E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE--KFQEFQREV 74
Query: 336 KVLCKIHHINVFISTFGNGSLSDHLHDP----------------LLKGHQPLTWTARTQI 379
++ ++H N+ L +H+P LL P+ W+ + ++
Sbjct: 75 FIMSNLNHPNIV-------KLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRL 127
Query: 380 ALDAAKGIEYIHDHTKARYVHRDIKTSNILL-----DDGLRAKVADFGLVKLEERTNEKE 434
LD A GIEY+ + VHRD+++ NI L + + AKVADFG + +
Sbjct: 128 MLDIALGIEYMQNQNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADFGT------SQQSV 180
Query: 435 MLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRA-- 492
+ L+G ++ PE I E T K D ++F ++L ++TG+
Sbjct: 181 HSVSGLLGNFQWMAPETI-----------GAEEESYTEKADTYSFAMILYTILTGEGPFD 229
Query: 493 -----------LIRDDS-EPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+IR++ PT + + V E C + D RP IV LS++
Sbjct: 230 EYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 124/298 (41%), Gaps = 76/298 (25%)
Query: 290 ATNNFDESRIIGRGGFGNVYFG--------------LLGDREAAIKKMRSNKSKEFFAEL 335
A N + + IG+GGFG V+ G +LGD E + + K +EF E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE--KFQEFQREV 74
Query: 336 KVLCKIHHINVFISTFGNGSLSDHLHDP----------------LLKGHQPLTWTARTQI 379
++ ++H N+ L +H+P LL P+ W+ + ++
Sbjct: 75 FIMSNLNHPNIV-------KLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRL 127
Query: 380 ALDAAKGIEYIHDHTKARYVHRDIKTSNILL-----DDGLRAKVADFGLVKLEERTNEKE 434
LD A GIEY+ + VHRD+++ NI L + + AKVADF L + +
Sbjct: 128 MLDIALGIEYMQNQNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADFSL------SQQSV 180
Query: 435 MLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRA-- 492
+ L+G ++ PE I E T K D ++F ++L ++TG+
Sbjct: 181 HSVSGLLGNFQWMAPETI-----------GAEEESYTEKADTYSFAMILYTILTGEGPFD 229
Query: 493 -----------LIRDDS-EPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+IR++ PT + + V E C + D RP IV LS++
Sbjct: 230 EYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 113/279 (40%), Gaps = 61/279 (21%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMRSN--KSKEFFAELKVLCKIHH------------- 343
+G+G FG V+ G G AIK ++ + F E +V+ K+ H
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + I GSL D L + K L +A A G+ Y+ + YVHRD
Sbjct: 86 PIYIVIEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDM 461
++ +NIL+ + L KVADFGL +L E + E A + P + PE RF
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIE---DNEXTARQGAKFPIKWTAPEAALYGRF---- 192
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELITGKRAL----------------IRDDSEPTKMKS 505
T K+DV++FG++L EL T R R P +S
Sbjct: 193 ---------TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES 243
Query: 506 LITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITSTE 544
L +M C +D +RP + A L TSTE
Sbjct: 244 LHDLMCQ----CWRKDPEERPTFEYLQAFLEDY-FTSTE 277
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 113/279 (40%), Gaps = 61/279 (21%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMRSN--KSKEFFAELKVLCKIHH------------- 343
+G+G FG V+ G G AIK ++ + F E +V+ K+ H
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + I GSL D L + K L +A A G+ Y+ + YVHRD
Sbjct: 86 PIYIVIEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDM 461
++ +NIL+ + L KVADFGL +L E + E A + P + PE RF
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRF---- 192
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELITGKRAL----------------IRDDSEPTKMKS 505
T K+DV++FG++L EL T R R P +S
Sbjct: 193 ---------TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES 243
Query: 506 LITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITSTE 544
L +M C +D +RP + A L TSTE
Sbjct: 244 LHDLMCQ----CWRKDPEERPTFEYLQAFLEDY-FTSTE 277
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 111/232 (47%), Gaps = 55/232 (23%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR-EAAIKKMRSNKSKE----FFAELKVLCKI-H 342
N+ +IG G FG V + G R +AAIK+M+ SK+ F EL+VLCK+ H
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 343 HINVF---------------ISTFGNGSLSDHLH-------DPLLKGHQPLTWTARTQ-- 378
H N+ I +G+L D L DP T +Q
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 379 --IALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEML 436
A D A+G++Y+ ++ +++HR++ NIL+ + AK+ADFGL + +E +K M
Sbjct: 142 LHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTM- 197
Query: 437 ATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
G LP ++ ++ + ++ TT +DV+++GV+L E+++
Sbjct: 198 --------GRLPVRWMAIESLNYSVY--------TTNSDVWSYGVLLWEIVS 233
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 115/280 (41%), Gaps = 66/280 (23%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR--SNKSKEFFAELKVLCKIHH------------- 343
+G G FG V+ G G + A+K ++ S F AE ++ ++ H
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 76
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + NGSL D L P LT +A A+G+ +I + Y+HR+
Sbjct: 77 PIYIITEYMENGSLVDFLKTP---SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRN 130
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDM 461
++ +NIL+ D L K+ADFGL +L E + E A P + PE I F
Sbjct: 131 LRAANILVSDTLSCKIADFGLARLIE---DNEYTAREGAKFPIKWTAPEAINYGTF---- 183
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELITGKR-------------------ALIRDDSEPTK 502
T K+DV++FG++L E++T R ++R D+ P +
Sbjct: 184 ---------TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE 234
Query: 503 MKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITS 542
+ L+ + C E DRP + ++L +
Sbjct: 235 LYQLMRL-------CWKERPEDRPTFDYLRSVLEDFFTAT 267
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 117/282 (41%), Gaps = 67/282 (23%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR--SNKSKEFFAELKVLCKIHH------------- 343
+G G G V+ G G + A+K ++ S F AE ++ ++ H
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + NGSL D L P LT +A A+G+ +I + Y+HRD
Sbjct: 81 PIYIITEYMENGSLVDFLKTP---SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 134
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDM 461
++ +NIL+ D L K+ADFGL +L E + E A P + PE I F
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIE---DAEXTAREGAKFPIKWTAPEAINYGTF---- 187
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELITGKR-------------------ALIRDDSEPTK 502
T K+DV++FG++L E++T R ++R D+ P +
Sbjct: 188 ---------TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE 238
Query: 503 MKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITSTE 544
+ L+ + C E DRP + ++L T+TE
Sbjct: 239 LYQLMRL-------CWKERPEDRPTFDYLRSVLEDF-FTATE 272
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 112/279 (40%), Gaps = 61/279 (21%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMRSN--KSKEFFAELKVLCKIHH------------- 343
+G+G FG V+ G G AIK ++ + F E +V+ KI H
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEE 85
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + GSL D L + K L +A A G+ Y+ + YVHRD
Sbjct: 86 PIYIVTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDM 461
++ +NIL+ + L KVADFGL +L E + E A + P + PE RF
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRF---- 192
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELITGKRAL----------------IRDDSEPTKMKS 505
T K+DV++FG++L EL T R R P +S
Sbjct: 193 ---------TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES 243
Query: 506 LITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITSTE 544
L +M C +D +RP + A L TSTE
Sbjct: 244 LHDLMCQ----CWRKDPEERPTFEYLQAFLEDY-FTSTE 277
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 112/279 (40%), Gaps = 61/279 (21%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMRSN--KSKEFFAELKVLCKIHH------------- 343
+G+G FG V+ G G AIK ++ + F E +V+ K+ H
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 74
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + GSL D L + K L +A A G+ Y+ + YVHRD
Sbjct: 75 PIYIVTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVE---RMNYVHRD 128
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDM 461
++ +NIL+ + L KVADFGL +L E + E A + P + PE RF
Sbjct: 129 LRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRF---- 181
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELITGKRAL----------------IRDDSEPTKMKS 505
T K+DV++FG++L EL T R R P +S
Sbjct: 182 ---------TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES 232
Query: 506 LITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITSTE 544
L +M C +D +RP + A L TSTE
Sbjct: 233 LHDLMCQ----CWRKDPEERPTFEYLQAFLEDY-FTSTE 266
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 112/279 (40%), Gaps = 61/279 (21%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMRSN--KSKEFFAELKVLCKIHH------------- 343
+G+G FG V+ G G AIK ++ + F E +V+ K+ H
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + GSL D L + K L +A A G+ Y+ + YVHRD
Sbjct: 86 PIYIVCEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDM 461
++ +NIL+ + L KVADFGL +L E + E A + P + PE RF
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRF---- 192
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELITGKRAL----------------IRDDSEPTKMKS 505
T K+DV++FG++L EL T R R P +S
Sbjct: 193 ---------TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES 243
Query: 506 LITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITSTE 544
L +M C +D +RP + A L TSTE
Sbjct: 244 LHDLMCQ----CWRKDPEERPTFEYLQAFLEDY-FTSTE 277
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 42/212 (19%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMRSNKSKEFFA---ELKVLCKIHHINVF-------- 347
IG G FG VY G GD I K+ ++F A E+ VL K H+N+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK 103
Query: 348 -----ISTFGNGS-LSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHR 401
++ + GS L HLH K IA A+G++Y+H +HR
Sbjct: 104 DNLAIVTQWCEGSSLYKHLHVQETK----FQMFQLIDIARQTAQGMDYLH---AKNIIHR 156
Query: 402 DIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKR---FR 458
D+K++NI L +GL K+ DFGL ++ R + + + + G+ ++ PE I ++ F
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVE-QPTGSVLWMAPEVIRMQDNNPFS 215
Query: 459 FDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
F ++DV+++G+VL EL+TG+
Sbjct: 216 F-------------QSDVYSYGIVLYELMTGE 234
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 112/279 (40%), Gaps = 61/279 (21%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMRSN--KSKEFFAELKVLCKIHH------------- 343
+G+G FG V+ G G AIK ++ + F E +V+ K+ H
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 76
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + GSL D L + K L +A A G+ Y+ + YVHRD
Sbjct: 77 PIYIVTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVE---RMNYVHRD 130
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDM 461
++ +NIL+ + L KVADFGL +L E + E A + P + PE RF
Sbjct: 131 LRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRF---- 183
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELITGKRAL----------------IRDDSEPTKMKS 505
T K+DV++FG++L EL T R R P +S
Sbjct: 184 ---------TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES 234
Query: 506 LITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITSTE 544
L +M C +D +RP + A L TSTE
Sbjct: 235 LHDLMCQ----CWRKDPEERPTFEYLQAFLEDY-FTSTE 268
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 118/285 (41%), Gaps = 61/285 (21%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR-SNKSKE-FFAELKVLCKIHH------------- 343
+G+G FG V+ G G AIK ++ N S E F E +V+ K+ H
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 252
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + GSL D L + K L +A A G+ Y+ + YVHRD
Sbjct: 253 PIYIVTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVE---RMNYVHRD 306
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDM 461
++ +NIL+ + L KVADFGL +L E + E A + P + PE RF
Sbjct: 307 LRAANILVGENLVCKVADFGLGRLIE---DNEYTARQGAKFPIKWTAPEAALYGRF---- 359
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELITGKRAL--------IRDDSE--------PTKMKS 505
T K+DV++FG++L EL T R + D E P +S
Sbjct: 360 ---------TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES 410
Query: 506 LITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITSTEWEASLG 550
L +M C +D +RP + A L TSTE + G
Sbjct: 411 LHDLMCQ----CWRKDPEERPTFEYLQAFLEDY-FTSTEPQXQPG 450
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 112/279 (40%), Gaps = 61/279 (21%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMRSN--KSKEFFAELKVLCKIHH------------- 343
+G+G FG V+ G G AIK ++ + F E +V+ K+ H
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + GSL D L + K L +A A G+ Y+ + YVHRD
Sbjct: 86 PIYIVTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDM 461
++ +NIL+ + L KVADFGL +L E + E A + P + PE RF
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRF---- 192
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELITGKRAL----------------IRDDSEPTKMKS 505
T K+DV++FG++L EL T R R P +S
Sbjct: 193 ---------TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES 243
Query: 506 LITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITSTE 544
L +M C +D +RP + A L TSTE
Sbjct: 244 LHDLMCQ----CWRKDPEERPTFEYLQAFLEDY-FTSTE 277
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 42/211 (19%)
Query: 298 RIIGRGGFGNVYFGLLGDREAAIKKMRSNKSKE-FFAELKVLCKIHHINV---------- 346
+ IG+G FG+V G + A+K ++++ + + F AE V+ ++ H N+
Sbjct: 12 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 71
Query: 347 ----FIST--FGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
+I T GSL D+L +G L + +LD + +EY+ + +VH
Sbjct: 72 KGGLYIVTEYMAKGSLVDYLRS---RGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 125
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFD 460
RD+ N+L+ + AKV+DFGL K T + L + + PE + K+F
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKKF--- 176
Query: 461 MHSSVMELQVTTKTDVFAFGVVLAELITGKR 491
+TK+DV++FG++L E+ + R
Sbjct: 177 ----------STKSDVWSFGILLWEIYSFGR 197
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 112/279 (40%), Gaps = 61/279 (21%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMRSN--KSKEFFAELKVLCKIHH------------- 343
+G+G FG V+ G G AIK ++ + F E +V+ K+ H
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + + G L D L + K L +A A G+ Y+ + YVHRD
Sbjct: 86 PIYIVMEYMSKGCLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDM 461
++ +NIL+ + L KVADFGL +L E + E A + P + PE RF
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRF---- 192
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELITGKRAL----------------IRDDSEPTKMKS 505
T K+DV++FG++L EL T R R P +S
Sbjct: 193 ---------TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES 243
Query: 506 LITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITSTE 544
L +M C +D +RP + A L TSTE
Sbjct: 244 LHDLMCQ----CWRKDPEERPTFEYLQAFLEDY-FTSTE 277
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 42/211 (19%)
Query: 298 RIIGRGGFGNVYFGLLGDREAAIKKMRSNKSKE-FFAELKVLCKIHHINV---------- 346
+ IG+G FG+V G + A+K ++++ + + F AE V+ ++ H N+
Sbjct: 27 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 86
Query: 347 ----FIST--FGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
+I T GSL D+L +G L + +LD + +EY+ + +VH
Sbjct: 87 KGGLYIVTEYMAKGSLVDYLRS---RGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 140
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFD 460
RD+ N+L+ + AKV+DFGL K T + L + + PE + K+F
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKKF--- 191
Query: 461 MHSSVMELQVTTKTDVFAFGVVLAELITGKR 491
+TK+DV++FG++L E+ + R
Sbjct: 192 ----------STKSDVWSFGILLWEIYSFGR 212
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 42/211 (19%)
Query: 298 RIIGRGGFGNVYFGLLGDREAAIKKMRSNKSKE-FFAELKVLCKIHHINV---------- 346
+ IG+G FG+V G + A+K ++++ + + F AE V+ ++ H N+
Sbjct: 199 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 258
Query: 347 ----FIST--FGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
+I T GSL D+L +G L + +LD + +EY+ + +VH
Sbjct: 259 KGGLYIVTEYMAKGSLVDYLRS---RGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 312
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFD 460
RD+ N+L+ + AKV+DFGL K T + L + + PE + K+F
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKKF--- 363
Query: 461 MHSSVMELQVTTKTDVFAFGVVLAELITGKR 491
+TK+DV++FG++L E+ + R
Sbjct: 364 ----------STKSDVWSFGILLWEIYSFGR 384
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 111/279 (39%), Gaps = 61/279 (21%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMRSN--KSKEFFAELKVLCKIHH------------- 343
+G+G FG V+ G G AIK ++ + F E +V+ K+ H
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + GSL D L + K L +A A G+ Y+ + YVHRD
Sbjct: 86 PIYIVTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDM 461
+ +NIL+ + L KVADFGL +L E + E A + P + PE RF
Sbjct: 140 LAAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRF---- 192
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELITGKRAL----------------IRDDSEPTKMKS 505
T K+DV++FG++L EL T R R P +S
Sbjct: 193 ---------TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES 243
Query: 506 LITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITSTE 544
L +M C +D +RP + A L TSTE
Sbjct: 244 LHDLMCQ----CWRKDPEERPTFEYLQAFLEDY-FTSTE 277
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 93/212 (43%), Gaps = 44/212 (20%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMRSN--KSKEFFAELKVLCKIHH------------- 343
+G+G FG V+ G G AIK ++ + F E +V+ K+ H
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 75
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGH--QPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
I + GSL D LKG + L +A A G+ Y+ + YVH
Sbjct: 76 PIXIVTEYMSKGSLLD-----FLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 127
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRF 459
RD++ +NIL+ + L KVADFGL +L E + E A + P + PE RF
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIE---DNEXTARQGAKFPIKWTAPEAALYGRF-- 182
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGKR 491
T K+DV++FG++L EL T R
Sbjct: 183 -----------TIKSDVWSFGILLTELTTKGR 203
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 111/279 (39%), Gaps = 61/279 (21%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMRSN--KSKEFFAELKVLCKIHH------------- 343
+G+G FG V+ G G AIK ++ + F E +V+ K+ H
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + G L D L + K L +A A G+ Y+ + YVHRD
Sbjct: 86 PIYIVTEYMSKGCLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDM 461
++ +NIL+ + L KVADFGL +L E + E A + P + PE RF
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRF---- 192
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELITGKRAL----------------IRDDSEPTKMKS 505
T K+DV++FG++L EL T R R P +S
Sbjct: 193 ---------TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES 243
Query: 506 LITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITSTE 544
L +M C +D +RP + A L TSTE
Sbjct: 244 LHDLMCQ----CWRKDPEERPTFEYLQAFLEDY-FTSTE 277
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 93/212 (43%), Gaps = 44/212 (20%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMRSN--KSKEFFAELKVLCKIHH------------- 343
+G+G FG V+ G G AIK ++ + F E +V+ K+ H
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 78
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGH--QPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
I + GSL D LKG + L +A A G+ Y+ + YVH
Sbjct: 79 PIYIVTEYMSKGSLLD-----FLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 130
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRF 459
RD++ +NIL+ + L KVADFGL +L E + E A + P + PE RF
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRF-- 185
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGKR 491
T K+DV++FG++L EL T R
Sbjct: 186 -----------TIKSDVWSFGILLTELTTKGR 206
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 95/224 (42%), Gaps = 48/224 (21%)
Query: 294 FDESRIIGRGGFGNVYFG--LLGDREAAIKKM-----RSN-KSKEFFAELKVLCKIHHIN 345
F + R IG G FG VYF + AIKKM +SN K ++ E++ L K+ H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 346 V--------------FISTFGNGSLSDHLHDPLLKGHQ-PLTWTARTQIALDAAKGIEYI 390
+ + GS SD LL+ H+ PL + A +G+ Y+
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASD-----LLEVHKKPLQEVEIAAVTHGALQGLAYL 170
Query: 391 HDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPE 450
H H +HRD+K NILL + K+ DFG + N VGTP ++ PE
Sbjct: 171 HSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX-------FVGTPYWMAPE 220
Query: 451 YIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALI 494
I ++ E Q K DV++ G+ EL K L
Sbjct: 221 VIL----------AMDEGQYDGKVDVWSLGITCIELAERKPPLF 254
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 93/212 (43%), Gaps = 44/212 (20%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMRSN--KSKEFFAELKVLCKIHH------------- 343
+G+G FG V+ G G AIK ++ + F E +V+ K+ H
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGH--QPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
I + GSL D LKG + L +A A G+ Y+ + YVH
Sbjct: 252 PIYIVTEYMSKGSLLD-----FLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 303
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRF 459
RD++ +NIL+ + L KVADFGL +L E + E A + P + PE RF
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRF-- 358
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGKR 491
T K+DV++FG++L EL T R
Sbjct: 359 -----------TIKSDVWSFGILLTELTTKGR 379
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 93/212 (43%), Gaps = 44/212 (20%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMRSN--KSKEFFAELKVLCKIHH------------- 343
+G+G FG V+ G G AIK ++ + F E +V+ K+ H
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGH--QPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
I + GSL D LKG + L +A A G+ Y+ + YVH
Sbjct: 252 PIYIVTEYMSKGSLLD-----FLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 303
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRF 459
RD++ +NIL+ + L KVADFGL +L E + E A + P + PE RF
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRF-- 358
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGKR 491
T K+DV++FG++L EL T R
Sbjct: 359 -----------TIKSDVWSFGILLTELTTKGR 379
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 95/224 (42%), Gaps = 48/224 (21%)
Query: 294 FDESRIIGRGGFGNVYFG--LLGDREAAIKKM-----RSN-KSKEFFAELKVLCKIHHIN 345
F + R IG G FG VYF + AIKKM +SN K ++ E++ L K+ H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 346 V--------------FISTFGNGSLSDHLHDPLLKGHQ-PLTWTARTQIALDAAKGIEYI 390
+ + GS SD LL+ H+ PL + A +G+ Y+
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASD-----LLEVHKKPLQEVEIAAVTHGALQGLAYL 131
Query: 391 HDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPE 450
H H +HRD+K NILL + K+ DFG + N VGTP ++ PE
Sbjct: 132 HSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX-------FVGTPYWMAPE 181
Query: 451 YIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALI 494
I ++ E Q K DV++ G+ EL K L
Sbjct: 182 VIL----------AMDEGQYDGKVDVWSLGITCIELAERKPPLF 215
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 42/211 (19%)
Query: 298 RIIGRGGFGNVYFGLLGDREAAIKKMRSNKSKE-FFAELKVLCKIHHINV---------- 346
+ IG+G FG+V G + A+K ++++ + + F AE V+ ++ H N+
Sbjct: 18 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 77
Query: 347 ----FIST--FGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
+I T GSL D+L +G L + +LD + +EY+ + +VH
Sbjct: 78 KGGLYIVTEYMAKGSLVDYLRS---RGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 131
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFD 460
RD+ N+L+ + AKV+DFGL K T + G LP ++ + R
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT-----------GKLPVKWTAPEALR-- 178
Query: 461 MHSSVMELQVTTKTDVFAFGVVLAELITGKR 491
E +TK+DV++FG++L E+ + R
Sbjct: 179 ------EAAFSTKSDVWSFGILLWEIYSFGR 203
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 40/211 (18%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR-----SNKSKEFFAELKVLCKIHHINVF------ 347
IG G FG VY G GD A+K + + + F E+ VL K H+N+
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 348 -------ISTFGNGS-LSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
++ + GS L HLH K IA A+G++Y+H + +
Sbjct: 79 TKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKS---II 131
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K++NI L + L K+ DFGL ++ R + +L G+ ++ PE I ++
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQD--- 187
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
+ + ++DV+AFG+VL EL+TG+
Sbjct: 188 -------KNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 40/211 (18%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR-----SNKSKEFFAELKVLCKIHHINVF------ 347
IG G FG VY G GD A+K + + + F E+ VL K H+N+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 348 -------ISTFGNGS-LSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
++ + GS L HLH K IA A+G++Y+H + +
Sbjct: 74 TAPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K++NI L + L K+ DFGL ++ R + +L G+ ++ PE I ++
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQD--- 182
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
+ + ++DV+AFG+VL EL+TG+
Sbjct: 183 -------KNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 40/211 (18%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR-----SNKSKEFFAELKVLCKIHHINVF------ 347
IG G FG VY G GD A+K + + + F E+ VL K H+N+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 348 -------ISTFGNGS-LSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
++ + GS L HLH K IA A+G++Y+H + +
Sbjct: 74 TKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K++NI L + L K+ DFGL ++ R + +L G+ ++ PE I ++
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQD--- 182
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
+ + ++DV+AFG+VL EL+TG+
Sbjct: 183 -------KNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 93/212 (43%), Gaps = 44/212 (20%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMRSN--KSKEFFAELKVLCKIHH------------- 343
+G+G FG V+ G G AIK ++ + F E +V+ K+ H
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGH--QPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
I + GSL D LKG + L ++ A G+ Y+ + YVH
Sbjct: 83 PIYIVTEYMNKGSLLD-----FLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVH 134
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRF 459
RD++ +NIL+ + L KVADFGL +L E + E A + P + PE RF
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIE---DNEWTARQGAKFPIKWTAPEAALYGRF-- 189
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGKR 491
T K+DV++FG++L EL T R
Sbjct: 190 -----------TIKSDVWSFGILLTELTTKGR 210
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 40/211 (18%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR-----SNKSKEFFAELKVLCKIHHINVF------ 347
IG G FG VY G GD A+K + + + F E+ VL K H+N+
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 348 -------ISTFGNGS-LSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
++ + GS L HLH K IA A+G++Y+H + +
Sbjct: 79 TKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKS---II 131
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K++NI L + L K+ DFGL ++ R + +L G+ ++ PE I ++
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQD--- 187
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
+ + ++DV+AFG+VL EL+TG+
Sbjct: 188 -------KNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 40/211 (18%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR-----SNKSKEFFAELKVLCKIHHINVF------ 347
IG G FG VY G GD A+K + + + F E+ VL K H+N+
Sbjct: 18 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 348 -------ISTFGNGS-LSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
++ + GS L HLH K IA A+G++Y+H + +
Sbjct: 76 TKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKS---II 128
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K++NI L + L K+ DFGL ++ R + +L G+ ++ PE I ++
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQD--- 184
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
+ + ++DV+AFG+VL EL+TG+
Sbjct: 185 -------KNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 93/212 (43%), Gaps = 44/212 (20%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMRSN--KSKEFFAELKVLCKIHH------------- 343
+G+G FG V+ G G AIK ++ + F E +V+ K+ H
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGH--QPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
I + GSL D LKG + L ++ A G+ Y+ + YVH
Sbjct: 83 PIYIVTEYMNKGSLLD-----FLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVH 134
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRF 459
RD++ +NIL+ + L KVADFGL +L E + E A + P + PE RF
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRF-- 189
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGKR 491
T K+DV++FG++L EL T R
Sbjct: 190 -----------TIKSDVWSFGILLTELTTKGR 210
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 93/212 (43%), Gaps = 44/212 (20%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMRSN--KSKEFFAELKVLCKIHH------------- 343
+G+G FG V+ G G AIK ++ + F E +V+ K+ H
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 334
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGH--QPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
I + GSL D LKG + L +A A G+ Y+ + YVH
Sbjct: 335 PIYIVTEYMSKGSLLD-----FLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 386
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRF 459
RD++ +NIL+ + L KVADFGL +L E + E A + P + PE RF
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRF-- 441
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGKR 491
T K+DV++FG++L EL T R
Sbjct: 442 -----------TIKSDVWSFGILLTELTTKGR 462
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 40/211 (18%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR-----SNKSKEFFAELKVLCKIHHINVF------ 347
IG G FG VY G GD A+K + + + F E+ VL K H+N+
Sbjct: 20 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 348 -------ISTFGNGS-LSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
++ + GS L HLH K IA A+G++Y+H + +
Sbjct: 78 TKPQLAIVTQWCEGSSLYHHLHASETK----FEMKKLIDIARQTARGMDYLHAKS---II 130
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K++NI L + K+ DFGL ++ R + +L G+ ++ PE I ++
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQ---- 185
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
S+ Q +DV+AFG+VL EL+TG+
Sbjct: 186 --DSNPYSFQ----SDVYAFGIVLYELMTGQ 210
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 93/212 (43%), Gaps = 44/212 (20%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMRSN--KSKEFFAELKVLCKIHH------------- 343
+G+G FG V+ G G AIK ++ + F E +V+ K+ H
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGH--QPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
I + GSL D LKG + L +A A G+ Y+ + YVH
Sbjct: 252 PIYIVGEYMSKGSLLD-----FLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 303
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRF 459
RD++ +NIL+ + L KVADFGL +L E + E A + P + PE RF
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRF-- 358
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGKR 491
T K+DV++FG++L EL T R
Sbjct: 359 -----------TIKSDVWSFGILLTELTTKGR 379
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 40/211 (18%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR-----SNKSKEFFAELKVLCKIHHINVF------ 347
IG G FG VY G GD A+K + + + F E+ VL K H+N+
Sbjct: 43 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 348 -------ISTFGNGS-LSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
++ + GS L HLH K IA A+G++Y+H + +
Sbjct: 101 TKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKS---II 153
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K++NI L + L K+ DFGL ++ R + +L G+ ++ PE I ++
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQD--- 209
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
+ + ++DV+AFG+VL EL+TG+
Sbjct: 210 -------KNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 40/211 (18%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR-----SNKSKEFFAELKVLCKIHHINVF------ 347
IG G FG VY G GD A+K + + + F E+ VL K H+N+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 348 -------ISTFGNGS-LSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
++ + GS L HLH K IA A+G++Y+H + +
Sbjct: 102 TKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKS---II 154
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K++NI L + L K+ DFGL ++ R + +L G+ ++ PE I ++
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQD--- 210
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
+ + ++DV+AFG+VL EL+TG+
Sbjct: 211 -------KNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 40/211 (18%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR-----SNKSKEFFAELKVLCKIHHINVF------ 347
IG G FG VY G GD A+K + + + F E+ VL K H+N+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 348 -------ISTFGNGS-LSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
++ + GS L HLH K IA A+G++Y+H + +
Sbjct: 74 TKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K++NI L + L K+ DFGL + R + +L G+ ++ PE I ++
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE-QLSGSILWMAPEVIRMQD--- 182
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
+ + ++DV+AFG+VL EL+TG+
Sbjct: 183 -------KNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 40/211 (18%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR-----SNKSKEFFAELKVLCKIHHINVF------ 347
IG G FG VY G GD A+K + + + F E+ VL K H+N+
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 348 -------ISTFGNGS-LSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
++ + GS L HLH K IA A+G++Y+H + +
Sbjct: 90 TAPQLAIVTQWCEGSSLYHHLHASETK----FEMKKLIDIARQTARGMDYLHAKS---II 142
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K++NI L + K+ DFGL + R + +L G+ ++ PE I ++
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF-EQLSGSILWMAPEVIRMQ---- 197
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
S+ Q +DV+AFG+VL EL+TG+
Sbjct: 198 --DSNPYSFQ----SDVYAFGIVLYELMTGQ 222
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 40/211 (18%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR-----SNKSKEFFAELKVLCKIHHINVF------ 347
IG G FG VY G GD A+K + + + F E+ VL K H+N+
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 348 -------ISTFGNGS-LSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
++ + GS L HLH K IA A+G++Y+H + +
Sbjct: 90 TKPQLAIVTQWCEGSSLYHHLHASETK----FEMKKLIDIARQTARGMDYLHAKS---II 142
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K++NI L + K+ DFGL + R + +L G+ ++ PE I ++
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE-QLSGSILWMAPEVIRMQ---- 197
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
S+ Q +DV+AFG+VL EL+TG+
Sbjct: 198 --DSNPYSFQ----SDVYAFGIVLYELMTGQ 222
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 40/211 (18%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR-----SNKSKEFFAELKVLCKIHHINVF------ 347
IG G FG VY G GD A+K + + + F E+ VL K H+N+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 348 -------ISTFGNGS-LSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
++ + GS L HLH K IA A+G++Y+H + +
Sbjct: 102 TKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKS---II 154
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K++NI L + L K+ DFGL + R + +L G+ ++ PE I ++
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE-QLSGSILWMAPEVIRMQD--- 210
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
+ + ++DV+AFG+VL EL+TG+
Sbjct: 211 -------KNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 40/211 (18%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR-----SNKSKEFFAELKVLCKIHHINVF------ 347
IG G FG VY G GD A+K + + + F E+ VL K H+N+
Sbjct: 36 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 348 -------ISTFGNGS-LSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
++ + GS L HLH K IA A+G++Y+H + +
Sbjct: 94 TKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKS---II 146
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K++NI L + L K+ DFGL + R + +L G+ ++ PE I ++
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE-QLSGSILWMAPEVIRMQD--- 202
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
+ + ++DV+AFG+VL EL+TG+
Sbjct: 203 -------KNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 123/280 (43%), Gaps = 59/280 (21%)
Query: 298 RIIGRGGFGNVYFGLL----GDREA--AIKKMRSNKSK----EFFAELKVLCKIHHINVF 347
++IG G FG VY G+L G +E AIK +++ ++ +F E ++ + H N+
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 348 -----ISTFG----------NGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHD 392
IS + NG+L L + + + A G++Y+ +
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREK----DGEFSVLQLVGMLRGIAAGMKYLAN 165
Query: 393 HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
YVHRD+ NIL++ L KV+DFGL ++ E E + + PE I
Sbjct: 166 MN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL-----------IRDDSE- 499
++F T+ +DV++FG+V+ E++T G+R I D
Sbjct: 223 SYRKF-------------TSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRL 269
Query: 500 PTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIM 539
PT M I + + C ++ RP+ DIV+IL +++
Sbjct: 270 PTPMDCPSAIYQLMMQ-CWQQERARRPKFADIVSILDKLI 308
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 123/285 (43%), Gaps = 60/285 (21%)
Query: 293 NFDESRIIGRGGFGNVYFGLLG-----DREAAIKKMR----SNKSKEFFAELKVLCKIHH 343
N +++G G FG V G L + AIK ++ + ++F E ++ + H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 344 INVF---------------ISTFGNGSLSDHLHDPLLKGHQP-LTWTARTQIALDAAKGI 387
N+ NGSL D L+ H T + A G+
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEXMENGSL-----DSFLRKHDAQFTVIQLVGMLRGIASGM 131
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GY 446
+Y+ D YVHRD+ NIL++ L KV+DFGL ++ E E TR P +
Sbjct: 132 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTTRGGKIPIRW 187
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRA--------LIRDD 497
PE I ++F T+ +DV+++G+VL E+++ G+R +I+
Sbjct: 188 TSPEAIAYRKF-------------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 234
Query: 498 SEPTKMKSLITIMAAVAEW---CLNEDAVDRPEMRDIVAILSQIM 539
E ++ + AA+ + C +D +RP+ IV+IL +++
Sbjct: 235 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 279
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 125/285 (43%), Gaps = 60/285 (21%)
Query: 293 NFDESRIIGRGGFGNVYFGLLG-----DREAAIKKMR----SNKSKEFFAELKVLCKIHH 343
N +++G G FG V G L + AIK ++ + ++F E ++ + H
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 93
Query: 344 IN-------------VFIST--FGNGSLSDHLHDPLLKGHQP-LTWTARTQIALDAAKGI 387
N V I T NGSL D L+ H T + A G+
Sbjct: 94 PNIIRLEGVVTKSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRGIASGM 148
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GY 446
+Y+ D YVHRD+ NIL++ L KV+DFGL ++ E E TR P +
Sbjct: 149 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTTRGGKIPIRW 204
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRA--------LIRDD 497
PE I ++F T+ +DV+++G+VL E+++ G+R +I+
Sbjct: 205 TSPEAIAYRKF-------------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 251
Query: 498 SEPTKMKSLITIMAAVAEW---CLNEDAVDRPEMRDIVAILSQIM 539
E ++ + AA+ + C +D +RP+ IV+IL +++
Sbjct: 252 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 296
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 125/285 (43%), Gaps = 60/285 (21%)
Query: 293 NFDESRIIGRGGFGNVYFGLLG-----DREAAIKKMR----SNKSKEFFAELKVLCKIHH 343
N +++G G FG V G L + AIK ++ + ++F E ++ + H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 344 IN-------------VFIST--FGNGSLSDHLHDPLLKGHQP-LTWTARTQIALDAAKGI 387
N V I T NGSL D L+ H T + A G+
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRGIASGM 131
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GY 446
+Y+ D YVHRD+ NIL++ L KV+DFGL ++ E E TR P +
Sbjct: 132 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTTRGGKIPIRW 187
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRA--------LIRDD 497
PE I ++F T+ +DV+++G+VL E+++ G+R +I+
Sbjct: 188 TSPEAIAYRKF-------------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 234
Query: 498 SEPTKMKSLITIMAAVAEW---CLNEDAVDRPEMRDIVAILSQIM 539
E ++ + AA+ + C +D +RP+ IV+IL +++
Sbjct: 235 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 279
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 125/285 (43%), Gaps = 60/285 (21%)
Query: 293 NFDESRIIGRGGFGNVYFGLLG-----DREAAIKKMR----SNKSKEFFAELKVLCKIHH 343
N +++G G FG V G L + AIK ++ + ++F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 344 IN-------------VFIST--FGNGSLSDHLHDPLLKGHQP-LTWTARTQIALDAAKGI 387
N V I T NGSL D L+ H T + A G+
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GY 446
+Y+ D YVHRD+ NIL++ L KV+DFGL ++ E E TR P +
Sbjct: 161 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEA-AYTTRGGKIPIRW 216
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRA--------LIRDD 497
PE I ++F T+ +DV+++G+VL E+++ G+R +I+
Sbjct: 217 TSPEAIAYRKF-------------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Query: 498 SEPTKMKSLITIMAAVAEW---CLNEDAVDRPEMRDIVAILSQIM 539
E ++ + AA+ + C +D +RP+ IV+IL +++
Sbjct: 264 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 123/285 (43%), Gaps = 60/285 (21%)
Query: 293 NFDESRIIGRGGFGNVYFGLLG-----DREAAIKKMR----SNKSKEFFAELKVLCKIHH 343
N +++G G FG V G L + AIK ++ + ++F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 344 INVF---------------ISTFGNGSLSDHLHDPLLKGHQP-LTWTARTQIALDAAKGI 387
N+ NGSL D L+ H T + A G+
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSL-----DSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GY 446
+Y+ D YVHRD+ NIL++ L KV+DFGL ++ E E TR P +
Sbjct: 161 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTTRGGKIPIRW 216
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRA--------LIRDD 497
PE I ++F T+ +DV+++G+VL E+++ G+R +I+
Sbjct: 217 TSPEAIAYRKF-------------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Query: 498 SEPTKMKSLITIMAAVAEW---CLNEDAVDRPEMRDIVAILSQIM 539
E ++ + AA+ + C +D +RP+ IV+IL +++
Sbjct: 264 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 126/279 (45%), Gaps = 58/279 (20%)
Query: 298 RIIGRGGFGNVYFGLL---GDREAA--IKKMR----SNKSKEFFAELKVLCKIHHINVF- 347
R+IG G FG V G L G R+ A IK ++ + ++F E ++ + H NV
Sbjct: 49 RVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVH 108
Query: 348 --------------ISTFGNGSLSDHLHDPLLKGHQ-PLTWTARTQIALDAAKGIEYIHD 392
I NG+L D L+ H T + A G+ Y+ D
Sbjct: 109 LEGVVTRGKPVMIVIEFMENGAL-----DAFLRKHDGQFTVIQLVGMLRGIAAGMRYLAD 163
Query: 393 HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
YVHRD+ NIL++ L KV+DFGL ++ E ++ E + T T G +P
Sbjct: 164 MG---YVHRDLAARNILVNSNLVCKVSDFGLSRVIE--DDPEAVYTT---TGGKIP---- 211
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRA--------LIRDDSEPTKM 503
R+ ++ + T+ +DV+++G+V+ E+++ G+R +I+ E ++
Sbjct: 212 ----VRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL 267
Query: 504 KSLITIMAAVAEW---CLNEDAVDRPEMRDIVAILSQIM 539
+ + A + + C ++ +RP+ IV IL +++
Sbjct: 268 PAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKMI 306
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 123/285 (43%), Gaps = 60/285 (21%)
Query: 293 NFDESRIIGRGGFGNVYFGLLG-----DREAAIKKMR----SNKSKEFFAELKVLCKIHH 343
N +++G G FG V G L + AIK ++ + ++F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 344 INVF---------------ISTFGNGSLSDHLHDPLLKGHQP-LTWTARTQIALDAAKGI 387
N+ NGSL D L+ H T + A G+
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GY 446
+Y+ D YVHRD+ NIL++ L KV+DFGL ++ E E TR P +
Sbjct: 161 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTTRGGKIPIRW 216
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRA--------LIRDD 497
PE I ++F T+ +DV+++G+VL E+++ G+R +I+
Sbjct: 217 TSPEAIAYRKF-------------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Query: 498 SEPTKMKSLITIMAAVAEW---CLNEDAVDRPEMRDIVAILSQIM 539
E ++ + AA+ + C +D +RP+ IV+IL +++
Sbjct: 264 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 123/285 (43%), Gaps = 60/285 (21%)
Query: 293 NFDESRIIGRGGFGNVYFGLLG-----DREAAIKKMR----SNKSKEFFAELKVLCKIHH 343
N +++G G FG V G L + AIK ++ + ++F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 344 INVF---------------ISTFGNGSLSDHLHDPLLKGHQP-LTWTARTQIALDAAKGI 387
N+ NGSL D L+ H T + A G+
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GY 446
+Y+ D YVHRD+ NIL++ L KV+DFGL ++ E E TR P +
Sbjct: 161 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTTRGGKIPIRW 216
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRA--------LIRDD 497
PE I ++F T+ +DV+++G+VL E+++ G+R +I+
Sbjct: 217 TSPEAIAYRKF-------------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Query: 498 SEPTKMKSLITIMAAVAEW---CLNEDAVDRPEMRDIVAILSQIM 539
E ++ + AA+ + C +D +RP+ IV+IL +++
Sbjct: 264 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 128/306 (41%), Gaps = 69/306 (22%)
Query: 282 FSLEEIEEATNNFDES---------RIIGRGGFGNVYFG---LLGDRE--AAIKKMRS-- 325
F+ E+ EA F + ++IG G FG V G L G RE AIK ++S
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 326 --NKSKEFFAELKVLCKIHHINVF--------------ISTF-GNGSLSDHLHDPLLKGH 368
+ ++F +E ++ + H NV I+ F NGSL L +
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR----QND 129
Query: 369 QPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEE 428
T + A G++Y+ D YVHRD+ NIL++ L KV+DFGL + E
Sbjct: 130 GQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 186
Query: 429 RTNEKEMLATRLVGTPG--YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
+ L G + PE I ++F T+ +DV+++G+V+ E+
Sbjct: 187 DDTSDPTYTSALGGKIPIRWTAPEAIQYRKF-------------TSASDVWSYGIVMWEV 233
Query: 487 IT-GKR------------ALIRDDSEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIVA 533
++ G+R A+ +D P M + + + C +D RP+ IV
Sbjct: 234 MSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLD-CWQKDRNHRPKFGQIVN 292
Query: 534 ILSQIM 539
L +++
Sbjct: 293 TLDKMI 298
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 125/285 (43%), Gaps = 60/285 (21%)
Query: 293 NFDESRIIGRGGFGNVYFGLLG-----DREAAIKKMR----SNKSKEFFAELKVLCKIHH 343
N +++G G FG V G L + AIK ++ + ++F E ++ + H
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 103
Query: 344 IN-------------VFIST--FGNGSLSDHLHDPLLKGHQP-LTWTARTQIALDAAKGI 387
N V I T NGSL D L+ H T + A G+
Sbjct: 104 PNIIRLEGVVTKSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRGIASGM 158
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GY 446
+Y+ D YVHRD+ NIL++ L KV+DFGL ++ E E TR P +
Sbjct: 159 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTTRGGKIPIRW 214
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRA--------LIRDD 497
PE I ++F T+ +DV+++G+VL E+++ G+R +I+
Sbjct: 215 TSPEAIAYRKF-------------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 261
Query: 498 SEPTKMKSLITIMAAVAEW---CLNEDAVDRPEMRDIVAILSQIM 539
E ++ + AA+ + C +D +RP+ IV+IL +++
Sbjct: 262 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 306
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 122/279 (43%), Gaps = 58/279 (20%)
Query: 298 RIIGRGGFGNVYFGLL---GDRE--AAIKKMR----SNKSKEFFAELKVLCKIHHINVF- 347
R+IG G FG V G L G RE AIK ++ + ++F E ++ + H N+
Sbjct: 28 RVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIH 87
Query: 348 --------------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDH 393
NGSL L K T + + G++Y+ D
Sbjct: 88 LEGVVTKSKPVMIVTEYMENGSLDTFLK----KNDGQFTVIQLVGMLRGISAGMKYLSDM 143
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYI 452
YVHRD+ NIL++ L KV+DFGL ++ E E TR P + PE I
Sbjct: 144 G---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTTRGGKIPIRWTAPEAI 199
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRA--------LIRDDSEPTKM 503
++F T+ +DV+++G+V+ E+++ G+R +I+ E ++
Sbjct: 200 AFRKF-------------TSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRL 246
Query: 504 KSLITIMAAVAEW---CLNEDAVDRPEMRDIVAILSQIM 539
S + AA+ + C ++ RP+ +IV +L +++
Sbjct: 247 PSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLI 285
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 123/285 (43%), Gaps = 60/285 (21%)
Query: 293 NFDESRIIGRGGFGNVYFGLLG-----DREAAIKKMR----SNKSKEFFAELKVLCKIHH 343
N +++G G FG V G L + AIK ++ + ++F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 344 INVF---------------ISTFGNGSLSDHLHDPLLKGHQP-LTWTARTQIALDAAKGI 387
N+ NGSL D L+ H T + A G+
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GY 446
+Y+ D YVHRD+ NIL++ L KV+DFGL ++ E E TR P +
Sbjct: 161 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTTRGGKIPIRW 216
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRA--------LIRDD 497
PE I ++F T+ +DV+++G+VL E+++ G+R +I+
Sbjct: 217 TSPEAIAYRKF-------------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Query: 498 SEPTKMKSLITIMAAVAEW---CLNEDAVDRPEMRDIVAILSQIM 539
E ++ + AA+ + C +D +RP+ IV+IL +++
Sbjct: 264 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 125/285 (43%), Gaps = 60/285 (21%)
Query: 293 NFDESRIIGRGGFGNVYFGLLG-----DREAAIKKMR----SNKSKEFFAELKVLCKIHH 343
N +++G G FG V G L + AIK ++ + ++F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 344 IN-------------VFIST--FGNGSLSDHLHDPLLKGHQP-LTWTARTQIALDAAKGI 387
N V I T NGSL D L+ H T + A G+
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GY 446
+Y+ D YVHRD+ NIL++ L KV+DFGL ++ E E TR P +
Sbjct: 161 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTTRGGKIPIRW 216
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRA--------LIRDD 497
PE I ++F T+ +DV+++G+VL E+++ G+R +I+
Sbjct: 217 TSPEAIAYRKF-------------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Query: 498 SEPTKMKSLITIMAAVAEW---CLNEDAVDRPEMRDIVAILSQIM 539
E ++ + AA+ + C +D +RP+ IV+IL +++
Sbjct: 264 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 46/221 (20%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDREA-----AIKKMRS----NKSKEFFAELKVLCKIHH 343
+F+E +IGRG FG VY G L D + A+K + + +F E ++ H
Sbjct: 52 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 109
Query: 344 INVF----------------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGI 387
NV + +G L + + + + H P T L AKG+
Sbjct: 110 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNP-TVKDLIGFGLQVAKGM 165
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYL 447
+Y+ ++VHRD+ N +LD+ KVADFGL + +KE + T L
Sbjct: 166 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR---DMYDKEYYSVH-NKTGAKL 218
Query: 448 PPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P +++ ++ S+ + TTK+DV++FGV+L EL+T
Sbjct: 219 PVKWMALE--------SLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 46/221 (20%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDREA-----AIKKMRS----NKSKEFFAELKVLCKIHH 343
+F+E +IGRG FG VY G L D + A+K + + +F E ++ H
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 344 INVF----------------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGI 387
NV + +G L + + + + H P T L AKG+
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNP-TVKDLIGFGLQVAKGM 146
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYL 447
+Y+ ++VHRD+ N +LD+ KVADFGL + +KE + T L
Sbjct: 147 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR---DMYDKEYYSVH-NKTGAKL 199
Query: 448 PPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P +++ ++ S+ + TTK+DV++FGV+L EL+T
Sbjct: 200 PVKWMALE--------SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 125/285 (43%), Gaps = 60/285 (21%)
Query: 293 NFDESRIIGRGGFGNVYFGLLG-----DREAAIKKMR----SNKSKEFFAELKVLCKIHH 343
N +++G G FG V G L + AIK ++ + ++F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 344 IN-------------VFIST--FGNGSLSDHLHDPLLKGHQP-LTWTARTQIALDAAKGI 387
N V I T NGSL D L+ H T + A G+
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GY 446
+Y+ D YVHRD+ NIL++ L KV+DFGL ++ E E TR P +
Sbjct: 161 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA-AYTTRGGKIPIRW 216
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRA--------LIRDD 497
PE I ++F T+ +DV+++G+VL E+++ G+R +I+
Sbjct: 217 TSPEAIAYRKF-------------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Query: 498 SEPTKMKSLITIMAAVAEW---CLNEDAVDRPEMRDIVAILSQIM 539
E ++ + AA+ + C +D +RP+ IV+IL +++
Sbjct: 264 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 46/221 (20%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDREA-----AIKKMRS----NKSKEFFAELKVLCKIHH 343
+F+E +IGRG FG VY G L D + A+K + + +F E ++ H
Sbjct: 32 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 344 INVF----------------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGI 387
NV + +G L + + + + H P T L AKG+
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNP-TVKDLIGFGLQVAKGM 145
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYL 447
+Y+ ++VHRD+ N +LD+ KVADFGL + +KE + T L
Sbjct: 146 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR---DMYDKEXXSVH-NKTGAKL 198
Query: 448 PPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P +++ ++ S+ + TTK+DV++FGV+L EL+T
Sbjct: 199 PVKWMALE--------SLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 46/221 (20%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDREA-----AIKKMRS----NKSKEFFAELKVLCKIHH 343
+F+E +IGRG FG VY G L D + A+K + + +F E ++ H
Sbjct: 25 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 82
Query: 344 INVF----------------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGI 387
NV + +G L + + + + H P T L AKG+
Sbjct: 83 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNP-TVKDLIGFGLQVAKGM 138
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYL 447
+Y+ ++VHRD+ N +LD+ KVADFGL + +KE + T L
Sbjct: 139 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR---DMYDKEYYSVH-NKTGAKL 191
Query: 448 PPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P +++ ++ S+ + TTK+DV++FGV+L EL+T
Sbjct: 192 PVKWMALE--------SLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 46/221 (20%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDREA-----AIKKMRS----NKSKEFFAELKVLCKIHH 343
+F+E +IGRG FG VY G L D + A+K + + +F E ++ H
Sbjct: 51 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 108
Query: 344 INVF----------------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGI 387
NV + +G L + + + + H P T L AKG+
Sbjct: 109 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNP-TVKDLIGFGLQVAKGM 164
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYL 447
+Y+ ++VHRD+ N +LD+ KVADFGL + +KE + T L
Sbjct: 165 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR---DMYDKEYYSVH-NKTGAKL 217
Query: 448 PPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P +++ ++ S+ + TTK+DV++FGV+L EL+T
Sbjct: 218 PVKWMALE--------SLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 46/221 (20%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDREA-----AIKKMRS----NKSKEFFAELKVLCKIHH 343
+F+E +IGRG FG VY G L D + A+K + + +F E ++ H
Sbjct: 28 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 85
Query: 344 INVF----------------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGI 387
NV + +G L + + + + H P T L AKG+
Sbjct: 86 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNP-TVKDLIGFGLQVAKGM 141
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYL 447
+Y+ ++VHRD+ N +LD+ KVADFGL + +KE + T L
Sbjct: 142 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR---DMYDKEYYSVH-NKTGAKL 194
Query: 448 PPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P +++ ++ S+ + TTK+DV++FGV+L EL+T
Sbjct: 195 PVKWMALE--------SLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 46/221 (20%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDREA-----AIKKMRS----NKSKEFFAELKVLCKIHH 343
+F+E +IGRG FG VY G L D + A+K + + +F E ++ H
Sbjct: 30 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 87
Query: 344 INVF----------------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGI 387
NV + +G L + + + + H P T L AKG+
Sbjct: 88 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNP-TVKDLIGFGLQVAKGM 143
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYL 447
+Y+ ++VHRD+ N +LD+ KVADFGL + +KE + T L
Sbjct: 144 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR---DMYDKEYYSVH-NKTGAKL 196
Query: 448 PPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P +++ ++ S+ + TTK+DV++FGV+L EL+T
Sbjct: 197 PVKWMALE--------SLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 46/215 (21%)
Query: 300 IGRGGFGNV---YFGLLGDREA---AIKKMRSNKS---KEFFAELKVLCKIHHINV---- 346
+G+G FG+V + L D A+KK++ + ++F E+++L + H N+
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 347 -------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDH 393
+ GSL D+L K + + Q KG+EY+
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 129
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
RY+HRD+ T NIL+++ R K+ DFGL K+ + E V PG P IF
Sbjct: 130 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-----VKEPGESP---IF 181
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ S+ E + + +DV++FGVVL EL T
Sbjct: 182 -----WYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 46/221 (20%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDREA-----AIKKMRS----NKSKEFFAELKVLCKIHH 343
+F+E +IGRG FG VY G L D + A+K + + +F E ++ H
Sbjct: 31 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 344 INVF----------------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGI 387
NV + +G L + + + + H P T L AKG+
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNP-TVKDLIGFGLQVAKGM 144
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYL 447
+Y+ ++VHRD+ N +LD+ KVADFGL + +KE + T L
Sbjct: 145 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR---DMYDKEYYSVH-NKTGAKL 197
Query: 448 PPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P +++ ++ S+ + TTK+DV++FGV+L EL+T
Sbjct: 198 PVKWMALE--------SLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 46/221 (20%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDREA-----AIKKMRS----NKSKEFFAELKVLCKIHH 343
+F+E +IGRG FG VY G L D + A+K + + +F E ++ H
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 344 INVF----------------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGI 387
NV + +G L + + + + H P T L AKG+
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNP-TVKDLIGFGLQVAKGM 146
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYL 447
+Y+ ++VHRD+ N +LD+ KVADFGL + +KE + T L
Sbjct: 147 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR---DMYDKEYYSVH-NKTGAKL 199
Query: 448 PPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P +++ ++ S+ + TTK+DV++FGV+L EL+T
Sbjct: 200 PVKWMALE--------SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 97/214 (45%), Gaps = 40/214 (18%)
Query: 300 IGRGGFGNVYFGLLGDREAAIKKMRSNKSKEFFAELKVLCKI--HHINV--FIST----- 350
+G+G +G V+ GL A+K S + +F E ++ + H N+ FI++
Sbjct: 16 VGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSR 75
Query: 351 ------------FGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH-----DH 393
+GSL D L L+ H L ++A+ AA G+ ++H
Sbjct: 76 NSSTQLWLITHYHEHGSLYDFLQRQTLEPHLAL------RLAVSAACGLAHLHVEIFGTQ 129
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEK-EMLATRLVGTPGYLPPEYI 452
K HRD K+ N+L+ L+ +AD GL + + ++ ++ VGT Y+ PE +
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPE-V 188
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
++ R D S TD++AFG+VL E+
Sbjct: 189 LDEQIRTDCFESY------KWTDIWAFGLVLWEI 216
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 46/215 (21%)
Query: 300 IGRGGFGNV---YFGLLGDREA---AIKKMRSNKS---KEFFAELKVLCKIHHINV---- 346
+G+G FG+V + L D A+KK++ + ++F E+++L + H N+
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 347 -------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDH 393
+ GSL D+L K + + Q KG+EY+
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 128
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
RY+HRD+ T NIL+++ R K+ DFGL K+ + E V PG P IF
Sbjct: 129 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-----VKEPGESP---IF 180
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ S+ E + + +DV++FGVVL EL T
Sbjct: 181 -----WYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 46/215 (21%)
Query: 300 IGRGGFGNV---YFGLLGDREA---AIKKMRSNKS---KEFFAELKVLCKIHHINV---- 346
+G+G FG+V + L D A+KK++ + ++F E+++L + H N+
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 347 -------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDH 393
+ GSL D+L K + + Q KG+EY+
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 134
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
RY+HRD+ T NIL+++ R K+ DFGL K+ + E V PG P IF
Sbjct: 135 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-----VKEPGESP---IF 186
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ S+ E + + +DV++FGVVL EL T
Sbjct: 187 -----WYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 46/221 (20%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDREA-----AIKKMRS----NKSKEFFAELKVLCKIHH 343
+F+E +IGRG FG VY G L D + A+K + + +F E ++ H
Sbjct: 32 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 344 INVF----------------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGI 387
NV + +G L + + + + H P T L AKG+
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNP-TVKDLIGFGLQVAKGM 145
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYL 447
+Y+ ++VHRD+ N +LD+ KVADFGL + +KE + T L
Sbjct: 146 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR---DMYDKEYYSVH-NKTGAKL 198
Query: 448 PPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P +++ ++ S+ + TTK+DV++FGV+L EL+T
Sbjct: 199 PVKWMALE--------SLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 98/215 (45%), Gaps = 46/215 (21%)
Query: 300 IGRGGFGNV---YFGLLGDREA---AIKKMRSNKS---KEFFAELKVLCKIHHINV---- 346
+G+G FG+V + L D A+KK++ + ++F E+++L + H N+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 347 -------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDH 393
+ GSL D+L K + + Q KG+EY+
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 130
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
RY+HRD+ T NIL+++ R K+ DFGL K+ +KE V PG P IF
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKV--LPQDKEFFK---VKEPGESP---IF 182
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ S+ E + + +DV++FGVVL EL T
Sbjct: 183 -----WYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 46/215 (21%)
Query: 300 IGRGGFGNV---YFGLLGDREA---AIKKMRSNKS---KEFFAELKVLCKIHHINV---- 346
+G+G FG+V + L D A+KK++ + ++F E+++L + H N+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 347 -------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDH 393
+ GSL D+L K + + Q KG+EY+
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 130
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
RY+HRD+ T NIL+++ R K+ DFGL K+ + E V PG P IF
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-----VKEPGESP---IF 182
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ S+ E + + +DV++FGVVL EL T
Sbjct: 183 -----WYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 46/215 (21%)
Query: 300 IGRGGFGNV---YFGLLGDREA---AIKKMRSNKS---KEFFAELKVLCKIHHINV---- 346
+G+G FG+V + L D A+KK++ + ++F E+++L + H N+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 347 -------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDH 393
+ GSL D+L K + + Q KG+EY+
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 130
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
RY+HRD+ T NIL+++ R K+ DFGL K+ + E V PG P IF
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-----VKEPGESP---IF 182
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ S+ E + + +DV++FGVVL EL T
Sbjct: 183 -----WYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 46/215 (21%)
Query: 300 IGRGGFGNV---YFGLLGDREA---AIKKMRSNKS---KEFFAELKVLCKIHHINV---- 346
+G+G FG+V + L D A+KK++ + ++F E+++L + H N+
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 347 -------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDH 393
+ GSL D+L K + + Q KG+EY+
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 161
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
RY+HRD+ T NIL+++ R K+ DFGL K+ + E V PG P IF
Sbjct: 162 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-----VKEPGESP---IF 213
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ S+ E + + +DV++FGVVL EL T
Sbjct: 214 -----WYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 46/215 (21%)
Query: 300 IGRGGFGNV---YFGLLGDREA---AIKKMRSNKS---KEFFAELKVLCKIHHINV---- 346
+G+G FG+V + L D A+KK++ + ++F E+++L + H N+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 347 -------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDH 393
+ GSL D+L K + + Q KG+EY+
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 133
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
RY+HRD+ T NIL+++ R K+ DFGL K+ + E V PG P IF
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-----VKEPGESP---IF 185
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ S+ E + + +DV++FGVVL EL T
Sbjct: 186 -----WYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 46/215 (21%)
Query: 300 IGRGGFGNV---YFGLLGDREA---AIKKMRSNKS---KEFFAELKVLCKIHHINV---- 346
+G+G FG+V + L D A+KK++ + ++F E+++L + H N+
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 347 -------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDH 393
+ GSL D+L K + + Q KG+EY+
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 136
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
RY+HRD+ T NIL+++ R K+ DFGL K+ + E V PG P IF
Sbjct: 137 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-----VKEPGESP---IF 188
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ S+ E + + +DV++FGVVL EL T
Sbjct: 189 -----WYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 46/215 (21%)
Query: 300 IGRGGFGNV---YFGLLGDREA---AIKKMRSNKS---KEFFAELKVLCKIHHINV---- 346
+G+G FG+V + L D A+KK++ + ++F E+++L + H N+
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 347 -------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDH 393
+ GSL D+L K + + Q KG+EY+
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 135
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
RY+HRD+ T NIL+++ R K+ DFGL K+ + E V PG P IF
Sbjct: 136 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-----VKEPGESP---IF 187
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ S+ E + + +DV++FGVVL EL T
Sbjct: 188 -----WYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 46/215 (21%)
Query: 300 IGRGGFGNV---YFGLLGDREA---AIKKMRSNKS---KEFFAELKVLCKIHHINV---- 346
+G+G FG+V + L D A+KK++ + ++F E+++L + H N+
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 347 -------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDH 393
+ GSL D+L K + + Q KG+EY+
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 137
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
RY+HRD+ T NIL+++ R K+ DFGL K+ + E V PG P IF
Sbjct: 138 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-----VKEPGESP---IF 189
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ S+ E + + +DV++FGVVL EL T
Sbjct: 190 -----WYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 46/215 (21%)
Query: 300 IGRGGFGNV---YFGLLGDREA---AIKKMRSNKS---KEFFAELKVLCKIHHINV---- 346
+G+G FG+V + L D A+KK++ + ++F E+++L + H N+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 347 -------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDH 393
+ GSL D+L K + + Q KG+EY+
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 148
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
RY+HRD+ T NIL+++ R K+ DFGL K+ + E V PG P IF
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-----VKEPGESP---IF 200
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ S+ E + + +DV++FGVVL EL T
Sbjct: 201 -----WYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 40/214 (18%)
Query: 300 IGRGGFGNVYFGLLGDREAAIKKMRSNKSKEFFAELK----VLCKIHHINVFIST----- 350
IG+G +G V+ G + A+K + + +F E + VL + +I FI+
Sbjct: 45 IGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGT 104
Query: 351 ------------FGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHD-----H 393
NGSL D+L L L ++A + G+ ++H
Sbjct: 105 GSWTQLYLITDYHENGSLYDYLKSTTLDAKSML------KLAYSSVSGLCHLHTEIFSTQ 158
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGL-VKLEERTNEKEMLATRLVGTPGYLPPEYI 452
K HRD+K+ NIL+ +AD GL VK TNE ++ VGT Y+PPE +
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVL 218
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
R S +M D+++FG++L E+
Sbjct: 219 DESLNRNHFQSYIM-------ADMYSFGLILWEV 245
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 46/215 (21%)
Query: 300 IGRGGFGNV---YFGLLGDREA---AIKKMRSNKS---KEFFAELKVLCKIHHINV---- 346
+G+G FG+V + L D A+KK++ + ++F E+++L + H N+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 347 -------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDH 393
+ GSL D+L K + + Q KG+EY+
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 148
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
RY+HRD+ T NIL+++ R K+ DFGL K+ + E V PG P IF
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-----VKEPGESP---IF 200
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ S+ E + + +DV++FGVVL EL T
Sbjct: 201 -----WYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 125/285 (43%), Gaps = 60/285 (21%)
Query: 293 NFDESRIIGRGGFGNVYFGLLG-----DREAAIKKMR----SNKSKEFFAELKVLCKIHH 343
N +++G G FG V G L + AIK ++ + ++F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 344 IN-------------VFIST--FGNGSLSDHLHDPLLKGHQP-LTWTARTQIALDAAKGI 387
N V I T NGSL D L+ H T + A G+
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GY 446
+Y+ D +VHRD+ NIL++ L KV+DFGL ++ E E TR P +
Sbjct: 161 KYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTTRGGKIPIRW 216
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRA--------LIRDD 497
PE I ++F T+ +DV+++G+VL E+++ G+R +I+
Sbjct: 217 TSPEAIAYRKF-------------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Query: 498 SEPTKMKSLITIMAAVAEW---CLNEDAVDRPEMRDIVAILSQIM 539
E ++ + AA+ + C +D +RP+ IV+IL +++
Sbjct: 264 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 116/297 (39%), Gaps = 68/297 (22%)
Query: 284 LEEIEEATNNFDESRIIGRGGFGNVYFGLLGDREAAIKKMRSNKSKEFFA-------ELK 336
L EI+ A +E IIG GGFG VY E A+K R + ++ E K
Sbjct: 1 LLEIDFAELTLEE--IIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAK 58
Query: 337 VLCKIHHINV--------------FISTFGNGS-LSDHLHDPLLKGHQPLTWTARTQIAL 381
+ + H N+ + F G L+ L + + W A+
Sbjct: 59 LFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AV 112
Query: 382 DAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLR--------AKVADFGLVKLEERTNEK 433
A+G+ Y+HD +HRD+K+SNIL+ + K+ DFGL + RT +
Sbjct: 113 QIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM 172
Query: 434 EMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRAL 493
G ++ PE I F + +DV+++GV+L EL+TG+
Sbjct: 173 SA-----AGAYAWMAPEVIRASMF-------------SKGSDVWSYGVLLWELLTGEVPF 214
Query: 494 IRDD----SEPTKMKSLITIM--------AAVAEWCLNEDAVDRPEMRDIVAILSQI 538
D + M L + A + E C N D RP +I+ L+ I
Sbjct: 215 RGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 46/217 (21%)
Query: 298 RIIGRGGFGNV---YFGLLGDREA---AIKKMRSNKS---KEFFAELKVLCKIHHINV-- 346
R +G+G FG+V + L D A+KK++ + ++F E+++L + H N+
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 347 ---------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
+ GSL ++L K + + Q KG+EY+
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQ----KHKERIDHIKLLQYTSQICKGMEYL- 133
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEY 451
RY+HRD+ T NIL+++ R K+ DFGL K+ + E V PG P
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-----VKEPGESP--- 183
Query: 452 IFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
IF + S+ E + + +DV++FGVVL EL T
Sbjct: 184 IF-----WYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 50/217 (23%)
Query: 300 IGRGGFGNV---YFGLLGDREA---AIKKMRSNKS---KEFFAELKVLCKIHHINV---- 346
+G+G FG+V + L D A+KK++ + ++F E+++L + H N+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 347 -------------FISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
+ GSL D+L H + + L +T++ KG+EY+
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQI------CKGMEYL- 133
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEY 451
RY+HRD+ T NIL+++ R K+ DFGL K+ + E V PG P
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-----VKEPGESP--- 183
Query: 452 IFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
IF + S+ E + + +DV++FGVVL EL T
Sbjct: 184 IF-----WYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 108/277 (38%), Gaps = 81/277 (29%)
Query: 300 IGRGGFGNVYFGLLGDREAAIKKMRSNKSKEFFA------------------ELKVL--C 339
IG+G FG VY G+ N +KE A E+ VL C
Sbjct: 27 IGKGSFGEVYKGI------------DNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC 74
Query: 340 KIHHINVFISTF-------------GNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKG 386
+I + ++ G GS D LLK PL T I + KG
Sbjct: 75 DSPYITRYFGSYLKSTKLWIIMEYLGGGSALD-----LLKP-GPLEETYIATILREILKG 128
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
++Y+H R +HRDIK +N+LL + K+ADFG+ + + ++ VGTP +
Sbjct: 129 LDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAG---QLTDTQIKRNXFVGTPFW 182
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRA-----------LIR 495
+ PE I + F K D+++ G+ EL G+ LI
Sbjct: 183 MAPEVIKQSAYDF-------------KADIWSLGITAIELAKGEPPNSDLHPMRVLFLIP 229
Query: 496 DDSEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIV 532
+S PT E CLN+D RP ++++
Sbjct: 230 KNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKELL 266
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 122/285 (42%), Gaps = 60/285 (21%)
Query: 293 NFDESRIIGRGGFGNVYFGLLG-----DREAAIKKMR----SNKSKEFFAELKVLCKIHH 343
N +++G G FG V G L + AIK ++ + ++F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 344 INVF---------------ISTFGNGSLSDHLHDPLLKGHQP-LTWTARTQIALDAAKGI 387
N+ NGSL D L+ H T + A G+
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSL-----DSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GY 446
+Y+ D VHRD+ NIL++ L KV+DFGL ++ E E TR P +
Sbjct: 161 KYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTTRGGKIPIRW 216
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRA--------LIRDD 497
PE I ++F T+ +DV+++G+VL E+++ G+R +I+
Sbjct: 217 TSPEAIAYRKF-------------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Query: 498 SEPTKMKSLITIMAAVAEW---CLNEDAVDRPEMRDIVAILSQIM 539
E ++ + AA+ + C +D +RP+ IV+IL +++
Sbjct: 264 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 46/221 (20%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDREA-----AIKKMRS----NKSKEFFAELKVLCKIHH 343
+F+E +IGRG FG VY G L D + A+K + + +F E ++ H
Sbjct: 92 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 149
Query: 344 INVF----------------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGI 387
NV + +G L + + + + H P T L AKG+
Sbjct: 150 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNP-TVKDLIGFGLQVAKGM 205
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYL 447
+++ ++VHRD+ N +LD+ KVADFGL + + E + + + T L
Sbjct: 206 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEFDSVHNK---TGAKL 258
Query: 448 PPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P +++ ++ S+ + TTK+DV++FGV+L EL+T
Sbjct: 259 PVKWMALE--------SLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 46/221 (20%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDREA-----AIKKMRS----NKSKEFFAELKVLCKIHH 343
+F+E +IGRG FG VY G L D + A+K + + +F E ++ H
Sbjct: 38 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 95
Query: 344 INVF----------------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGI 387
NV + +G L + + + + H P T L AKG+
Sbjct: 96 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNP-TVKDLIGFGLQVAKGM 151
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYL 447
+++ ++VHRD+ N +LD+ KVADFGL + + E + + + T L
Sbjct: 152 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEFDSVHNK---TGAKL 204
Query: 448 PPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P +++ ++ S+ + TTK+DV++FGV+L EL+T
Sbjct: 205 PVKWMALE--------SLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 36/198 (18%)
Query: 346 VFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKT 405
+ + G GS D L PL T I + KG++Y+H K +HRDIK
Sbjct: 102 IIMEYLGGGSALDLLEP------GPLDETQIATILREILKGLDYLHSEKK---IHRDIKA 152
Query: 406 SNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSV 465
+N+LL + K+ADFG+ + + ++ VGTP ++ PE I K+ +D
Sbjct: 153 ANVLLSEHGEVKLADFGVAG---QLTDTQIKRNTFVGTPFWMAPEVI--KQSAYD----- 202
Query: 466 MELQVTTKTDVFAFGVVLAELITGKRA-----------LIRDDSEPTKMKSLITIMAAVA 514
+K D+++ G+ EL G+ LI ++ PT + +
Sbjct: 203 ------SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFV 256
Query: 515 EWCLNEDAVDRPEMRDIV 532
E CLN++ RP ++++
Sbjct: 257 EACLNKEPSFRPTAKELL 274
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 113/288 (39%), Gaps = 72/288 (25%)
Query: 297 SRIIGRGGFGNVYFGLLGDR-----EAAIKKMRS----NKSKEFFAELKVLCKIHHINVF 347
R+IG+G FG VY G D+ + AIK + + + F E ++ ++H NV
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 348 ----------------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
+ +G L + P + T L A+G+EY+
Sbjct: 86 ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSP----QRNPTVKDLISFGLQVARGMEYL- 140
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEY 451
+ ++VHRD+ N +LD+ KVADFGL + L EY
Sbjct: 141 --AEQKFVHRDLAARNCMLDESFTVKVADFGLAR-------------------DILDREY 179
Query: 452 IFVKRFR-------FDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMK 504
V++ R + S+ + TTK+DV++FGV+L EL+T R +P +
Sbjct: 180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYR-HIDPFDLT 238
Query: 505 SLIT-------------IMAAVAEWCLNEDAVDRPEMRDIVAILSQIM 539
+ + V + C D RP R +V + QI+
Sbjct: 239 HFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIV 286
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 122/280 (43%), Gaps = 60/280 (21%)
Query: 298 RIIGRGGFGNVYFGLL---GDRE--AAIKKMRS----NKSKEFFAELKVLCKIHHINVF- 347
++IG G FG V G L G RE AIK +++ + ++F +E ++ + H N+
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 348 --------------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDH 393
NGSL L K T + G++Y+ D
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFLR----KNDGRFTVIQLVGMLRGIGSGMKYLSDM 129
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYI 452
+ YVHRD+ NIL++ L KV+DFG+ ++ E E TR P + PE I
Sbjct: 130 S---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAA-YTTRGGKIPIRWTAPEAI 185
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRA--------LIRDDSE---- 499
++F T+ +DV+++G+V+ E+++ G+R +I+ E
Sbjct: 186 AYRKF-------------TSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL 232
Query: 500 PTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIM 539
P M I + + + C ++ DRP+ IV +L +++
Sbjct: 233 PPPMDCPIALHQLMLD-CWQKERSDRPKFGQIVNMLDKLI 271
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 46/221 (20%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDREA-----AIKKMRS----NKSKEFFAELKVLCKIHH 343
+F+E +IGRG FG VY G L D + A+K + + +F E ++ H
Sbjct: 34 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 344 INVF----------------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGI 387
NV + +G L + + + + H P T L AKG+
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNP-TVKDLIGFGLQVAKGM 147
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYL 447
+++ ++VHRD+ N +LD+ KVADFGL + + E + + + T L
Sbjct: 148 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEFDSVHNK---TGAKL 200
Query: 448 PPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P +++ ++ S+ + TTK+DV++FGV+L EL+T
Sbjct: 201 PVKWMALE--------SLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 36/198 (18%)
Query: 346 VFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKT 405
+ + G GS D L PL T I + KG++Y+H K +HRDIK
Sbjct: 82 IIMEYLGGGSALDLLEP------GPLDETQIATILREILKGLDYLHSEKK---IHRDIKA 132
Query: 406 SNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSV 465
+N+LL + K+ADFG+ + + ++ VGTP ++ PE I K+ +D
Sbjct: 133 ANVLLSEHGEVKLADFGVAG---QLTDTQIKRNXFVGTPFWMAPEVI--KQSAYD----- 182
Query: 466 MELQVTTKTDVFAFGVVLAELITGKRA-----------LIRDDSEPTKMKSLITIMAAVA 514
+K D+++ G+ EL G+ LI ++ PT + +
Sbjct: 183 ------SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFV 236
Query: 515 EWCLNEDAVDRPEMRDIV 532
E CLN++ RP ++++
Sbjct: 237 EACLNKEPSFRPTAKELL 254
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 36/198 (18%)
Query: 346 VFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKT 405
+ + G GS D L PL T I + KG++Y+H K +HRDIK
Sbjct: 97 IIMEYLGGGSALDLLEP------GPLDETQIATILREILKGLDYLHSEKK---IHRDIKA 147
Query: 406 SNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSV 465
+N+LL + K+ADFG+ + + ++ VGTP ++ PE I K+ +D
Sbjct: 148 ANVLLSEHGEVKLADFGVAG---QLTDTQIKRNXFVGTPFWMAPEVI--KQSAYD----- 197
Query: 466 MELQVTTKTDVFAFGVVLAELITGKRA-----------LIRDDSEPTKMKSLITIMAAVA 514
+K D+++ G+ EL G+ LI ++ PT + +
Sbjct: 198 ------SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFV 251
Query: 515 EWCLNEDAVDRPEMRDIV 532
E CLN++ RP ++++
Sbjct: 252 EACLNKEPSFRPTAKELL 269
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 122/280 (43%), Gaps = 60/280 (21%)
Query: 298 RIIGRGGFGNVYFGLL---GDRE--AAIKKMRS----NKSKEFFAELKVLCKIHHINVF- 347
++IG G FG V G L G RE AIK +++ + ++F +E ++ + H N+
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 348 --------------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDH 393
NGSL L K T + G++Y+ D
Sbjct: 80 LEGVVTKCKPVMIITEYMENGSLDAFLR----KNDGRFTVIQLVGMLRGIGSGMKYLSDM 135
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYI 452
+ YVHRD+ NIL++ L KV+DFG+ ++ E E TR P + PE I
Sbjct: 136 S---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA-AYTTRGGKIPIRWTAPEAI 191
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRA--------LIRDDSE---- 499
++F T+ +DV+++G+V+ E+++ G+R +I+ E
Sbjct: 192 AYRKF-------------TSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL 238
Query: 500 PTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIM 539
P M I + + + C ++ DRP+ IV +L +++
Sbjct: 239 PPPMDCPIALHQLMLD-CWQKERSDRPKFGQIVNMLDKLI 277
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 46/221 (20%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDREA-----AIKKMRS----NKSKEFFAELKVLCKIHH 343
+F+E +IGRG FG VY G L D + A+K + + +F E ++ H
Sbjct: 31 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 344 INVF----------------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGI 387
NV + +G L + + + + H P T L AKG+
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNP-TVKDLIGFGLQVAKGM 144
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYL 447
+++ ++VHRD+ N +LD+ KVADFGL + + E + + + T L
Sbjct: 145 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEFDSVHNK---TGAKL 197
Query: 448 PPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P +++ ++ S+ + TTK+DV++FGV+L EL+T
Sbjct: 198 PVKWMALE--------SLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 46/221 (20%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDREA-----AIKKMRS----NKSKEFFAELKVLCKIHH 343
+F+E +IGRG FG VY G L D + A+K + + +F E ++ H
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 344 INVF----------------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGI 387
NV + +G L + + + + H P T L AKG+
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNP-TVKDLIGFGLQVAKGM 146
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYL 447
+++ ++VHRD+ N +LD+ KVADFGL + + E + + + T L
Sbjct: 147 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEFDSVHNK---TGAKL 199
Query: 448 PPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P +++ ++ S+ + TTK+DV++FGV+L EL+T
Sbjct: 200 PVKWMALE--------SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 46/221 (20%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDREA-----AIKKMRS----NKSKEFFAELKVLCKIHH 343
+F+E +IGRG FG VY G L D + A+K + + +F E ++ H
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 344 INVF----------------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGI 387
NV + +G L + + + + H P T L AKG+
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNP-TVKDLIGFGLQVAKGM 146
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYL 447
+++ ++VHRD+ N +LD+ KVADFGL + + E + + + T L
Sbjct: 147 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEFDSVHNK---TGAKL 199
Query: 448 PPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P +++ ++ S+ + TTK+DV++FGV+L EL+T
Sbjct: 200 PVKWMALE--------SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 118/279 (42%), Gaps = 58/279 (20%)
Query: 298 RIIGRGGFGNVYFGLL---GDREA--AIKKMRSN----KSKEFFAELKVLCKIHHINVF- 347
+IIG G G V +G L G R+ AIK +++ + ++F +E ++ + H N+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 348 ---ISTFG-----------NGSLSDHLHDPLLKGHQ-PLTWTARTQIALDAAKGIEYIHD 392
+ T G NGSL D L+ H T + G+ Y+ D
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSL-----DTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD 169
Query: 393 HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
YVHRD+ N+L+D L KV+DFGL ++ E + T + PE I
Sbjct: 170 LG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAI 226
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT---------GKRALIRDDSEPTKM 503
+ F ++ +DV++FGVV+ E++ R +I E ++
Sbjct: 227 AFRTF-------------SSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRL 273
Query: 504 KSLITIMAAVAEW---CLNEDAVDRPEMRDIVAILSQIM 539
+ + A+ + C ++D RP IV++L ++
Sbjct: 274 PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 36/198 (18%)
Query: 346 VFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKT 405
+ + G GS D L PL T I + KG++Y+H K +HRDIK
Sbjct: 82 IIMEYLGGGSALDLLEP------GPLDETQIATILREILKGLDYLHSEKK---IHRDIKA 132
Query: 406 SNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSV 465
+N+LL + K+ADFG+ + + ++ VGTP ++ PE I K+ +D
Sbjct: 133 ANVLLSEHGEVKLADFGVAG---QLTDTQIKRNTFVGTPFWMAPEVI--KQSAYD----- 182
Query: 466 MELQVTTKTDVFAFGVVLAELITGKRA-----------LIRDDSEPTKMKSLITIMAAVA 514
+K D+++ G+ EL G+ LI ++ PT + +
Sbjct: 183 ------SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFV 236
Query: 515 EWCLNEDAVDRPEMRDIV 532
E CLN++ RP ++++
Sbjct: 237 EACLNKEPSFRPTAKELL 254
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 103/248 (41%), Gaps = 49/248 (19%)
Query: 299 IIGRGGFGNVYFGLLGDREAA-------IKKMRSNKSKEFFAELKVLCKIHHINV--FIS 349
++G+G FG + RE + + + F E+KV+ + H NV FI
Sbjct: 17 VLGKGCFGQAI--KVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 350 TFGNGS----LSDHLHDPLLKG-----HQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
+++++ L+G W+ R A D A G+ Y+H +H
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIH 131
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKL--EERTNEKEMLATR---------LVGTPGYLPP 449
RD+ + N L+ + VADFGL +L +E+T + + + + +VG P ++ P
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 450 EYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSLITI 509
E I + + K DVF+FG+VL E+I R D P M + +
Sbjct: 192 EMINGRSY-------------DEKVDVFSFGIVLCEIIG--RVNADPDYLPRTMDFGLNV 236
Query: 510 MAAVAEWC 517
+ +C
Sbjct: 237 RGFLDRYC 244
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 118/279 (42%), Gaps = 58/279 (20%)
Query: 298 RIIGRGGFGNVYFGLL---GDREA--AIKKMRSN----KSKEFFAELKVLCKIHHINVF- 347
+IIG G G V +G L G R+ AIK +++ + ++F +E ++ + H N+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 348 ---ISTFG-----------NGSLSDHLHDPLLKGHQ-PLTWTARTQIALDAAKGIEYIHD 392
+ T G NGSL D L+ H T + G+ Y+ D
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSL-----DTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD 169
Query: 393 HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
YVHRD+ N+L+D L KV+DFGL ++ E + T + PE I
Sbjct: 170 LG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAI 226
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT---------GKRALIRDDSEPTKM 503
+ F ++ +DV++FGVV+ E++ R +I E ++
Sbjct: 227 AFRTF-------------SSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRL 273
Query: 504 KSLITIMAAVAEW---CLNEDAVDRPEMRDIVAILSQIM 539
+ + A+ + C ++D RP IV++L ++
Sbjct: 274 PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 46/221 (20%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDREA-----AIKKMRS----NKSKEFFAELKVLCKIHH 343
+F+E +IGRG FG VY G L D + A+K + + +F E ++ H
Sbjct: 34 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 344 INVF----------------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGI 387
NV + +G L + + + + H P T L AKG+
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNP-TVKDLIGFGLQVAKGM 147
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYL 447
+++ ++VHRD+ N +LD+ KVADFGL + + E + + + T L
Sbjct: 148 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-DMLDKEFDSVHNK---TGAKL 200
Query: 448 PPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P +++ ++ S+ + TTK+DV++FGV+L EL+T
Sbjct: 201 PVKWMALE--------SLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 122/287 (42%), Gaps = 65/287 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKS----KEFFAELKVL--- 338
F + +++G G FG VY GL G++ AIK++R S KE E V+
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 339 -----------CKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAK 385
C + + + G L D++ H + L W + AK
Sbjct: 76 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 129
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+ D R VHRD+ N+L+ K+ DFGL KL EKE A G
Sbjct: 130 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG-AEEKEYHAEG-----G 180
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL----------I 494
+P +++ ++ S++ T ++DV+++GV + EL+T G + I
Sbjct: 181 KVPIKWMALE--------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 232
Query: 495 RDDSEPTKMKSLITI---MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ E + TI M V W ++ D+ RP+ R+++ S++
Sbjct: 233 LEKGERLPQPPICTIDVYMIMVKCWMIDADS--RPKFRELIIEFSKM 277
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 46/215 (21%)
Query: 300 IGRGGFGNV---YFGLLGDREA---AIKKMRSNKS---KEFFAELKVLCKIHHINV---- 346
+G+G FG+V + L D A+KK++ + ++F E+++L + H N+
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 347 -------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDH 393
+ GSL D+L K + + Q KG+EY+
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 131
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
RY+HR++ T NIL+++ R K+ DFGL K+ +KE V PG P IF
Sbjct: 132 GTKRYIHRNLATRNILVENENRVKIGDFGLTKV--LPQDKEYYK---VKEPGESP---IF 183
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ S+ E + + +DV++FGVVL EL T
Sbjct: 184 -----WYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 122/287 (42%), Gaps = 65/287 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKS----KEFFAELKVL--- 338
F + +++G G FG VY GL G++ AIK++R S KE E V+
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 339 -----------CKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAK 385
C + + + G L D++ H + L W + AK
Sbjct: 75 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+ D R VHRD+ N+L+ K+ DFGL KL EKE A G
Sbjct: 129 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG-AEEKEYHAEG-----G 179
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL----------I 494
+P +++ ++ S++ T ++DV+++GV + EL+T G + I
Sbjct: 180 KVPIKWMALE--------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 231
Query: 495 RDDSEPTKMKSLITI---MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ E + TI M V W ++ D+ RP+ R+++ S++
Sbjct: 232 LEKGERLPQPPICTIDVYMIMVKCWMIDADS--RPKFRELIIEFSKM 276
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 122/287 (42%), Gaps = 65/287 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKS----KEFFAELKVL--- 338
F + +++G G FG VY GL G++ AIK++R S KE E V+
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 339 -----------CKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAK 385
C + + + G L D++ H + L W + AK
Sbjct: 78 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 131
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+ D R VHRD+ N+L+ K+ DFGL KL EKE A G
Sbjct: 132 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG-AEEKEYHAEG-----G 182
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL----------I 494
+P +++ ++ S++ T ++DV+++GV + EL+T G + I
Sbjct: 183 KVPIKWMALE--------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 234
Query: 495 RDDSEPTKMKSLITI---MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ E + TI M V W ++ D+ RP+ R+++ S++
Sbjct: 235 LEKGERLPQPPICTIDVYMIMVKCWMIDADS--RPKFRELIIEFSKM 279
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 122/287 (42%), Gaps = 65/287 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKS----KEFFAELKVL--- 338
F + +++G G FG VY GL G++ AIK++R S KE E V+
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 339 -----------CKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAK 385
C + + + G L D++ H + L W + AK
Sbjct: 79 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 132
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+ D R VHRD+ N+L+ K+ DFGL KL EKE A G
Sbjct: 133 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG-AEEKEYHAEG-----G 183
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL----------I 494
+P +++ ++ S++ T ++DV+++GV + EL+T G + I
Sbjct: 184 KVPIKWMALE--------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 235
Query: 495 RDDSEPTKMKSLITI---MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ E + TI M V W ++ D+ RP+ R+++ S++
Sbjct: 236 LEKGERLPQPPICTIDVYMIMVKCWMIDADS--RPKFRELIIEFSKM 280
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 122/287 (42%), Gaps = 65/287 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKS----KEFFAELKVL--- 338
F + +++G G FG VY GL G++ AIK++R S KE E V+
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 339 -----------CKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAK 385
C + + + G L D++ H + L W + AK
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+ D R VHRD+ N+L+ K+ DFGL KL EKE A G
Sbjct: 131 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG-AEEKEYHAEG-----G 181
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL----------I 494
+P +++ ++ S++ T ++DV+++GV + EL+T G + I
Sbjct: 182 KVPIKWMALE--------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 233
Query: 495 RDDSEPTKMKSLITI---MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ E + TI M V W ++ D+ RP+ R+++ S++
Sbjct: 234 LEKGERLPQPPICTIDVYMIMVKCWMIDADS--RPKFRELIIEFSKM 278
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 122/287 (42%), Gaps = 65/287 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKS----KEFFAELKVL--- 338
F + +++G G FG VY GL G++ AIK++R S KE E V+
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 339 -----------CKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAK 385
C + + + G L D++ H + L W + AK
Sbjct: 76 DNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AK 129
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+ D R VHRD+ N+L+ K+ DFGL KL EKE A G
Sbjct: 130 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG-AEEKEYHAEG-----G 180
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL----------I 494
+P +++ ++ S++ T ++DV+++GV + EL+T G + I
Sbjct: 181 KVPIKWMALE--------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 232
Query: 495 RDDSEPTKMKSLITI---MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ E + TI M V W ++ D+ RP+ R+++ S++
Sbjct: 233 LEKGERLPQPPICTIDVYMIMVKCWMIDADS--RPKFRELIIEFSKM 277
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 98/233 (42%), Gaps = 55/233 (23%)
Query: 300 IGRGGFGNVYFGLLGD-------REAAIKKMRSNKSKEFFAELKVLCKIHHINV--FIST 350
IG G FG + +E I +M S + +E E+ VL + H N+ + +
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 351 FG-NGSLS---------------DHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHT 394
F NGSL + L + Q L W + +AL +++HD
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLAL------KHVHDR- 144
Query: 395 KARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFV 454
+ +HRDIK+ NI L ++ DFG+ ++ T E LA +GTP YL PE
Sbjct: 145 --KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE---LARACIGTPYYLSPEICEN 199
Query: 455 KRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSLI 507
K + K+D++A G VL EL T K A E MK+L+
Sbjct: 200 KPY-------------NNKSDIWALGCVLYELCTLKHAF-----EAGSMKNLV 234
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 121/292 (41%), Gaps = 76/292 (26%)
Query: 300 IGRGGFGNVYFG----LLGDREA------AIKKMRSNKSKEFFAELKVLCKIHHINVFIS 349
+G G FG V+ LL +++ A+K+ + ++F E ++L + H ++ +
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI-VR 107
Query: 350 TFG----------------NGSLSDHL--HDP---LLKGHQ-----PLTWTARTQIALDA 383
FG +G L+ L H P LL G + PL +A
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-----LEERTNEKEMLAT 438
A G+ Y+ +VHRD+ T N L+ GL K+ DFG+ + R + ML
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 439 RLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL---- 493
R ++PPE I ++F TT++DV++FGVVL E+ T GK+
Sbjct: 225 R------WMPPESILYRKF-------------TTESDVWSFGVVLWEIFTYGKQPWYQLS 265
Query: 494 -------IRDDSEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
I E + ++ + A+ C + R ++D+ A L +
Sbjct: 266 NTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 317
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 121/287 (42%), Gaps = 65/287 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKS----KEFFAELKVL--- 338
F + +++G G FG VY GL G++ AIK++R S KE E V+
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 339 -----------CKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAK 385
C + + G L D++ H + L W + AK
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+ D R VHRD+ N+L+ K+ DFGL KL EKE A G
Sbjct: 129 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG-AEEKEYHAEG-----G 179
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL----------I 494
+P +++ ++ S++ T ++DV+++GV + EL+T G + I
Sbjct: 180 KVPIKWMALE--------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 231
Query: 495 RDDSEPTKMKSLITI---MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ E + TI M V W ++ D+ RP+ R+++ S++
Sbjct: 232 LEKGERLPQPPICTIDVYMIMVKCWMIDADS--RPKFRELIIEFSKM 276
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 121/287 (42%), Gaps = 65/287 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKS----KEFFAELKVL--- 338
F + +++G G FG VY GL G++ AIK++R S KE E V+
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 339 -----------CKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAK 385
C + + G L D++ H + L W + AK
Sbjct: 78 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 131
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+ D R VHRD+ N+L+ K+ DFGL KL EKE A G
Sbjct: 132 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG-AEEKEYHAEG-----G 182
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL----------I 494
+P +++ ++ S++ T ++DV+++GV + EL+T G + I
Sbjct: 183 KVPIKWMALE--------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 234
Query: 495 RDDSEPTKMKSLITI---MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ E + TI M V W ++ D+ RP+ R+++ S++
Sbjct: 235 LEKGERLPQPPICTIDVYMIMVKCWMIDADS--RPKFRELIIEFSKM 279
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 121/287 (42%), Gaps = 65/287 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKS----KEFFAELKVL--- 338
F + +++G G FG VY GL G++ AIK++R S KE E V+
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 339 -----------CKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAK 385
C + + G L D++ H + L W + AK
Sbjct: 77 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+ D R VHRD+ N+L+ K+ DFGL KL EKE A G
Sbjct: 131 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG-AEEKEYHAEG-----G 181
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL----------I 494
+P +++ ++ S++ T ++DV+++GV + EL+T G + I
Sbjct: 182 KVPIKWMALE--------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 233
Query: 495 RDDSEPTKMKSLITI---MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ E + TI M V W ++ D+ RP+ R+++ S++
Sbjct: 234 LEKGERLPQPPICTIDVYMIMVKCWMIDADS--RPKFRELIIEFSKM 278
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 121/287 (42%), Gaps = 65/287 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKS----KEFFAELKVL--- 338
F + +++G G FG VY GL G++ AIK++R S KE E V+
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 339 -----------CKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAK 385
C + + G L D++ H + L W + AK
Sbjct: 78 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 131
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+ D R VHRD+ N+L+ K+ DFGL KL EKE A G
Sbjct: 132 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG-AEEKEYHAEG-----G 182
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL----------I 494
+P +++ ++ S++ T ++DV+++GV + EL+T G + I
Sbjct: 183 KVPIKWMALE--------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 234
Query: 495 RDDSEPTKMKSLITI---MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ E + TI M V W ++ D+ RP+ R+++ S++
Sbjct: 235 LEKGERLPQPPICTIDVYMIMVKCWMIDADS--RPKFRELIIEFSKM 279
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 121/287 (42%), Gaps = 65/287 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKS----KEFFAELKVL--- 338
F + +++G G FG VY GL G++ AIK++R S KE E V+
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 339 -----------CKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAK 385
C + + G L D++ H + L W + AK
Sbjct: 82 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 135
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+ D R VHRD+ N+L+ K+ DFGL KL EKE A G
Sbjct: 136 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG-AEEKEYHAEG-----G 186
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL----------I 494
+P +++ ++ S++ T ++DV+++GV + EL+T G + I
Sbjct: 187 KVPIKWMALE--------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 238
Query: 495 RDDSEPTKMKSLITI---MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ E + TI M V W ++ D+ RP+ R+++ S++
Sbjct: 239 LEKGERLPQPPICTIDVYMIMVKCWMIDADS--RPKFRELIIEFSKM 283
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 121/292 (41%), Gaps = 76/292 (26%)
Query: 300 IGRGGFGNVYFG----LLGDREA------AIKKMRSNKSKEFFAELKVLCKIHHINVFIS 349
+G G FG V+ LL +++ A+K+ + ++F E ++L + H ++ +
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI-VR 78
Query: 350 TFG----------------NGSLSDHL--HDP---LLKGHQ-----PLTWTARTQIALDA 383
FG +G L+ L H P LL G + PL +A
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-----LEERTNEKEMLAT 438
A G+ Y+ +VHRD+ T N L+ GL K+ DFG+ + R + ML
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 439 RLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL---- 493
R ++PPE I ++F TT++DV++FGVVL E+ T GK+
Sbjct: 196 R------WMPPESILYRKF-------------TTESDVWSFGVVLWEIFTYGKQPWYQLS 236
Query: 494 -------IRDDSEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
I E + ++ + A+ C + R ++D+ A L +
Sbjct: 237 NTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 288
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 121/287 (42%), Gaps = 65/287 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKS----KEFFAELKVL--- 338
F + +++G G FG VY GL G++ AIK++R S KE E V+
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 339 -----------CKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAK 385
C + + G L D++ H + L W + AK
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+ D R VHRD+ N+L+ K+ DFGL KL EKE A G
Sbjct: 129 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG-AEEKEYHAEG-----G 179
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL----------I 494
+P +++ ++ S++ T ++DV+++GV + EL+T G + I
Sbjct: 180 KVPIKWMALE--------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 231
Query: 495 RDDSEPTKMKSLITI---MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ E + TI M V W ++ D+ RP+ R+++ S++
Sbjct: 232 LEKGERLPQPPICTIDVYMIMVKCWMIDADS--RPKFRELIIEFSKM 276
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 120/281 (42%), Gaps = 60/281 (21%)
Query: 298 RIIGRGGFGNVYFG---LLGDRE--AAIKKMRS----NKSKEFFAELKVLCKIHHINVF- 347
++IG G FG V G L G RE AIK ++S + ++F +E ++ + H NV
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 348 -------------ISTF-GNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDH 393
I+ F NGSL L + T + A G++Y+ D
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLR----QNDGQFTVIQLVGMLRGIAAGMKYLAD- 127
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGT-P-GYLPPEY 451
YVHR + NIL++ L KV+DFGL + E + L G P + PE
Sbjct: 128 --MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 185
Query: 452 IFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKR------------ALIRDDS 498
I ++F T+ +DV+++G+V+ E+++ G+R A+ +D
Sbjct: 186 IQYRKF-------------TSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYR 232
Query: 499 EPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIM 539
P M + + + C +D RP+ IV L +++
Sbjct: 233 LPPPMDCPSALHQLMLD-CWQKDRNHRPKFGQIVNTLDKMI 272
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 121/287 (42%), Gaps = 65/287 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKS----KEFFAELKVL--- 338
F + +++G G FG VY GL G++ AIK++R S KE E V+
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 339 -----------CKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAK 385
C + + G L D++ H + L W + AK
Sbjct: 81 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 134
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+ D R VHRD+ N+L+ K+ DFGL KL EKE A G
Sbjct: 135 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG-AEEKEYHAEG-----G 185
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL----------I 494
+P +++ ++ S++ T ++DV+++GV + EL+T G + I
Sbjct: 186 KVPIKWMALE--------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 237
Query: 495 RDDSEPTKMKSLITI---MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ E + TI M V W ++ D+ RP+ R+++ S++
Sbjct: 238 LEKGERLPQPPICTIDVYMIMVKCWMIDADS--RPKFRELIIEFSKM 282
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 61/285 (21%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKS----KEFFAELKVL--- 338
F + +++G G FG VY GL G++ AIK++R S KE E V+
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 339 -----------CKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAK 385
C + + G L D++ H + L W + AK
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+ D R VHRD+ N+L+ K+ DFGL KL EKE A G
Sbjct: 129 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG-AEEKEYHAEG-----G 179
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL----------I 494
+P +++ ++ S++ T ++DV+++GV + EL+T G + I
Sbjct: 180 KVPIKWMALE--------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 231
Query: 495 RDDSEPTKMKSLITI-MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ E + TI + + C DA RP+ R+++ S++
Sbjct: 232 LEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 276
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 121/292 (41%), Gaps = 76/292 (26%)
Query: 300 IGRGGFGNVYFG----LLGDREA------AIKKMRSNKSKEFFAELKVLCKIHHINVFIS 349
+G G FG V+ LL +++ A+K+ + ++F E ++L + H ++ +
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI-VR 84
Query: 350 TFG----------------NGSLSDHL--HDP---LLKGHQ-----PLTWTARTQIALDA 383
FG +G L+ L H P LL G + PL +A
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-----LEERTNEKEMLAT 438
A G+ Y+ +VHRD+ T N L+ GL K+ DFG+ + R + ML
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 439 RLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL---- 493
R ++PPE I ++F TT++DV++FGVVL E+ T GK+
Sbjct: 202 R------WMPPESILYRKF-------------TTESDVWSFGVVLWEIFTYGKQPWYQLS 242
Query: 494 -------IRDDSEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
I E + ++ + A+ C + R ++D+ A L +
Sbjct: 243 NTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 294
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 121/287 (42%), Gaps = 65/287 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKS----KEFFAELKVL--- 338
F + +++G G FG VY GL G++ AIK++R S KE E V+
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 339 -----------CKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAK 385
C + + G L D++ H + L W + AK
Sbjct: 69 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 122
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+ D R VHRD+ N+L+ K+ DFGL KL EKE A G
Sbjct: 123 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG-AEEKEYHAEG-----G 173
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL----------I 494
+P +++ ++ S++ T ++DV+++GV + EL+T G + I
Sbjct: 174 KVPIKWMALE--------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 225
Query: 495 RDDSEPTKMKSLITI---MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ E + TI M V W ++ D+ RP+ R+++ S++
Sbjct: 226 LEKGERLPQPPICTIDVYMIMVKCWMIDADS--RPKFRELIIEFSKM 270
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 121/285 (42%), Gaps = 65/285 (22%)
Query: 294 FDESRIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKS----KEFFAELKVL----- 338
F + +++G G FG VY GL G++ AIK++R S KE E V+
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 339 ---------CKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAKGI 387
C + + G L D++ H + L W + AKG+
Sbjct: 102 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 155
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYL 447
Y+ D R VHRD+ N+L+ K+ DFGL KL EKE A G +
Sbjct: 156 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL-LGAEEKEYHAEG-----GKV 206
Query: 448 PPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL----------IRD 496
P +++ ++ S++ T ++DV+++GV + EL+T G + I +
Sbjct: 207 PIKWMALE--------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 258
Query: 497 DSEPTKMKSLITI---MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
E + TI M V W ++ D+ RP+ R+++ S++
Sbjct: 259 KGERLPQPPICTIDVYMIMVKCWMIDADS--RPKFRELIIEFSKM 301
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 98/238 (41%), Gaps = 64/238 (26%)
Query: 293 NFDESRIIGRGGFGNVYFG--LLGDREAAIKKMRSNKSKEFFAELKVLCKIHHINV---- 346
+F E +IG GGFG V+ + + I++++ N K E+K L K+ H+N+
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE-REVKALAKLDHVNIVHYN 71
Query: 347 -------FISTFGNGSLSDHLHDPLLKGHQPLTWTA--------------------RTQI 379
+ + SL +DP + + T R
Sbjct: 72 GCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 131
Query: 380 ALDA----------AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LD KG++YIH + +HRD+K SNI L D + K+ DFGLV +
Sbjct: 132 KLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKN 188
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELI 487
++ TR GT Y+ PE I + + + D++A G++LAEL+
Sbjct: 189 DGKR----TRSKGTLRYMSPEQISSQDY-------------GKEVDLYALGLILAELL 229
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 49/217 (22%)
Query: 298 RIIGRGGFGNVYFGL-LGDRE-----AAIKKMRSNKS----KEFFAELKVL--------- 338
+++G G FG VY G+ + D E AIK +R N S KE E V+
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 339 -----CKIHHINVFISTFGNGSLSDHLHD--PLLKGHQPLTWTARTQIALDAAKGIEYIH 391
C + + G L DH+ + L L W + AKG+ Y+
Sbjct: 83 RLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNW------CMQIAKGMSYLE 136
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEY 451
D R VHRD+ N+L+ K+ DFGL +L + +E E A G +P ++
Sbjct: 137 D---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLD-IDETEYHADG-----GKVPIKW 187
Query: 452 IFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ ++ S++ + T ++DV+++GV + EL+T
Sbjct: 188 MALE--------SILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 28/208 (13%)
Query: 300 IGRGGFGNVYFGLLGDREAAIKKMRSNKSKEFF--AELKVLCKIHHINV--FISTFG--N 353
IG+G FG V+ G E A+K S + + +F AE+ + H N+ FI+ N
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 70
Query: 354 GSLSD-------HLHDPLLK--GHQPLTWTARTQIALDAAKGIEYIH-----DHTKARYV 399
G+ + H H L +T ++AL A G+ ++H K
Sbjct: 71 GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 130
Query: 400 HRDIKTSNILLDDGLRAKVADFGL-VKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFR 458
HRD+K+ NIL+ +AD GL V+ + T+ ++ VGT Y+ PE +
Sbjct: 131 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL------ 184
Query: 459 FDMHSSVMELQVTTKTDVFAFGVVLAEL 486
D ++ + + D++A G+V E+
Sbjct: 185 -DDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 28/208 (13%)
Query: 300 IGRGGFGNVYFGLLGDREAAIKKMRSNKSKEFF--AELKVLCKIHHINV--FISTFG--N 353
IG+G FG V+ G E A+K S + + +F AE+ + H N+ FI+ N
Sbjct: 50 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 109
Query: 354 GSLSD-------HLHDPLLK--GHQPLTWTARTQIALDAAKGIEYIH-----DHTKARYV 399
G+ + H H L +T ++AL A G+ ++H K
Sbjct: 110 GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 169
Query: 400 HRDIKTSNILLDDGLRAKVADFGL-VKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFR 458
HRD+K+ NIL+ +AD GL V+ + T+ ++ VGT Y+ PE +
Sbjct: 170 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL------ 223
Query: 459 FDMHSSVMELQVTTKTDVFAFGVVLAEL 486
D ++ + + D++A G+V E+
Sbjct: 224 -DDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 28/208 (13%)
Query: 300 IGRGGFGNVYFGLLGDREAAIKKMRSNKSKEFF--AELKVLCKIHHINV--FISTFG--N 353
IG+G FG V+ G E A+K S + + +F AE+ + H N+ FI+ N
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 71
Query: 354 GSLSD-------HLHDPLLK--GHQPLTWTARTQIALDAAKGIEYIH-----DHTKARYV 399
G+ + H H L +T ++AL A G+ ++H K
Sbjct: 72 GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 131
Query: 400 HRDIKTSNILLDDGLRAKVADFGL-VKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFR 458
HRD+K+ NIL+ +AD GL V+ + T+ ++ VGT Y+ PE +
Sbjct: 132 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL------ 185
Query: 459 FDMHSSVMELQVTTKTDVFAFGVVLAEL 486
D ++ + + D++A G+V E+
Sbjct: 186 -DDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 28/208 (13%)
Query: 300 IGRGGFGNVYFGLLGDREAAIKKMRSNKSKEFF--AELKVLCKIHHINV--FISTFG--N 353
IG+G FG V+ G E A+K S + + +F AE+ + H N+ FI+ N
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 76
Query: 354 GSLSD-------HLHDPLLK--GHQPLTWTARTQIALDAAKGIEYIH-----DHTKARYV 399
G+ + H H L +T ++AL A G+ ++H K
Sbjct: 77 GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 136
Query: 400 HRDIKTSNILLDDGLRAKVADFGL-VKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFR 458
HRD+K+ NIL+ +AD GL V+ + T+ ++ VGT Y+ PE +
Sbjct: 137 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL------ 190
Query: 459 FDMHSSVMELQVTTKTDVFAFGVVLAEL 486
D ++ + + D++A G+V E+
Sbjct: 191 -DDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 61/285 (21%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKS----KEFFAELKVL--- 338
F + +++G G FG VY GL G++ AIK++R S KE E V+
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 339 -----------CKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAK 385
C + + G L D++ H + L W + AK
Sbjct: 78 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 131
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+ D R VHRD+ N+L+ K+ DFGL KL EKE A G
Sbjct: 132 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG-AEEKEYHAEG-----G 182
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL----------I 494
+P +++ ++ S++ T ++DV+++GV + EL+T G + I
Sbjct: 183 KVPIKWMALE--------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 234
Query: 495 RDDSEPTKMKSLITI-MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ E + TI + + C DA RP+ R+++ S++
Sbjct: 235 LEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 279
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 28/208 (13%)
Query: 300 IGRGGFGNVYFGLLGDREAAIKKMRSNKSKEFF--AELKVLCKIHHINV--FISTFG--N 353
IG+G FG V+ G E A+K S + + +F AE+ + H N+ FI+ N
Sbjct: 37 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 96
Query: 354 GSLSD-------HLHDPLLK--GHQPLTWTARTQIALDAAKGIEYIH-----DHTKARYV 399
G+ + H H L +T ++AL A G+ ++H K
Sbjct: 97 GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 156
Query: 400 HRDIKTSNILLDDGLRAKVADFGL-VKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFR 458
HRD+K+ NIL+ +AD GL V+ + T+ ++ VGT Y+ PE +
Sbjct: 157 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL------ 210
Query: 459 FDMHSSVMELQVTTKTDVFAFGVVLAEL 486
D ++ + + D++A G+V E+
Sbjct: 211 -DDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 28/208 (13%)
Query: 300 IGRGGFGNVYFGLLGDREAAIKKMRSNKSKEFF--AELKVLCKIHHINV--FISTFG--N 353
IG+G FG V+ G E A+K S + + +F AE+ + H N+ FI+ N
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 73
Query: 354 GSLSD-------HLHDPLLK--GHQPLTWTARTQIALDAAKGIEYIH-----DHTKARYV 399
G+ + H H L +T ++AL A G+ ++H K
Sbjct: 74 GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 133
Query: 400 HRDIKTSNILLDDGLRAKVADFGL-VKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFR 458
HRD+K+ NIL+ +AD GL V+ + T+ ++ VGT Y+ PE +
Sbjct: 134 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL------ 187
Query: 459 FDMHSSVMELQVTTKTDVFAFGVVLAEL 486
D ++ + + D++A G+V E+
Sbjct: 188 -DDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 132/311 (42%), Gaps = 71/311 (22%)
Query: 278 RTII--FSLEEIEEATNNFDES---------RIIGRGGFGNVYFGLL---GDRE--AAIK 321
RT + F+ E+ +A F + ++IG G FG V G L G RE AIK
Sbjct: 4 RTFVDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIK 63
Query: 322 KMRS----NKSKEFFAELKVLCKIHHINVF---------------ISTFGNGSLSDHLHD 362
+++ + ++F +E ++ + H N+ NGSL L
Sbjct: 64 TLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR- 122
Query: 363 PLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFG 422
K T + G++Y+ D + VHRD+ NIL++ L KV+DFG
Sbjct: 123 ---KNDGRFTVIQLVGMLRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFG 176
Query: 423 LVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGV 481
+ ++ E E TR P + PE I ++F T+ +DV+++G+
Sbjct: 177 MSRVLEDDPEA-AYTTRGGKIPIRWTAPEAIAYRKF-------------TSASDVWSYGI 222
Query: 482 VLAELIT-GKRA--------LIRDDSE----PTKMKSLITIMAAVAEWCLNEDAVDRPEM 528
V+ E+++ G+R +I+ E P M I + + + C ++ DRP+
Sbjct: 223 VMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLD-CWQKERSDRPKF 281
Query: 529 RDIVAILSQIM 539
IV +L +++
Sbjct: 282 GQIVNMLDKLI 292
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 61/285 (21%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKS----KEFFAELKVL--- 338
F + +++G G FG VY GL G++ AIK++R S KE E V+
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 339 -----------CKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAK 385
C + + G L D++ H + L W + AK
Sbjct: 85 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 138
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+ D R VHRD+ N+L+ K+ DFGL KL EKE A G
Sbjct: 139 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG-AEEKEYHAEG-----G 189
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL----------I 494
+P +++ ++ S++ T ++DV+++GV + EL+T G + I
Sbjct: 190 KVPIKWMALE--------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 241
Query: 495 RDDSEPTKMKSLITI-MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ E + TI + + C DA RP+ R+++ S++
Sbjct: 242 LEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 286
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 94/225 (41%), Gaps = 40/225 (17%)
Query: 300 IGRGGFGNVYFGLLGDR-EAAIKKMR--SNKSKEFFAELKVLCKIHH------------- 343
+G G FG V+ + A+K M+ S + F AE V+ + H
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE 82
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + GSL D L QPL + A+G+ +I Y+HRD
Sbjct: 83 PIYIITEFMAKGSLLDFLKSDE-GSKQPLP--KLIDFSAQIAEGMAFIEQRN---YIHRD 136
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDM 461
++ +NIL+ L K+ADFGL ++ E + E A P + PE I F
Sbjct: 137 LRAANILVSASLVCKIADFGLARVIE---DNEYTAREGAKFPIKWTAPEAINFGSF---- 189
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSL 506
T K+DV++FG++L E++T R S P +++L
Sbjct: 190 ---------TIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 225
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 107/240 (44%), Gaps = 63/240 (26%)
Query: 292 NNFDESRIIGRGGFGNVY----FGLLGDRE---AAIKKMRS---NKSKEFFAELKVLCKI 341
+N R +G G FG V+ + L +++ A+K ++ N K+F E ++L +
Sbjct: 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 72
Query: 342 HHINVFISTFG----------------NGSLSDHL--HDP----LLKGHQP--LTWTART 377
H ++ + +G +G L+ L H P + +G+ P LT +
Sbjct: 73 QHEHI-VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQML 131
Query: 378 QIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-----LEERTNE 432
IA A G+ Y+ +VHRD+ T N L+ + L K+ DFG+ + R
Sbjct: 132 HIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGG 188
Query: 433 KEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKR 491
ML R ++PPE I ++F TT++DV++ GVVL E+ T GK+
Sbjct: 189 HTMLPIR------WMPPESIMYRKF-------------TTESDVWSLGVVLWEIFTYGKQ 229
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 121/287 (42%), Gaps = 65/287 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKS----KEFFAELKVL--- 338
F + +++G G FG VY GL G++ AIK++R S KE E V+
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 339 -----------CKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAK 385
C + + + G L D++ H + L W + AK
Sbjct: 79 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 132
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+ D R VHRD+ N+L+ K+ DFG KL EKE A G
Sbjct: 133 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLG-AEEKEYHAEG-----G 183
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL----------I 494
+P +++ ++ S++ T ++DV+++GV + EL+T G + I
Sbjct: 184 KVPIKWMALE--------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 235
Query: 495 RDDSEPTKMKSLITI---MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ E + TI M V W ++ D+ RP+ R+++ S++
Sbjct: 236 LEKGERLPQPPICTIDVYMIMVKCWMIDADS--RPKFRELIIEFSKM 280
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 121/287 (42%), Gaps = 65/287 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKS----KEFFAELKVL--- 338
F + +++G G FG VY GL G++ AIK++R S KE E V+
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 339 -----------CKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAK 385
C + + G L D++ H + L W + A+
Sbjct: 72 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AE 125
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+ D R VHRD+ N+L+ K+ DFGL KL EKE A G
Sbjct: 126 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG-AEEKEYHAEG-----G 176
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL----------I 494
+P +++ ++ S++ T ++DV+++GV + EL+T G + I
Sbjct: 177 KVPIKWMALE--------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 228
Query: 495 RDDSEPTKMKSLITI---MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ E + TI M V W ++ D+ RP+ R+++ S++
Sbjct: 229 LEKGERLPQPPICTIDVYMIMVKCWMIDADS--RPKFRELIIEFSKM 273
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 121/287 (42%), Gaps = 65/287 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKS----KEFFAELKVL--- 338
F + +++G G FG VY GL G++ AIK++R S KE E V+
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 339 -----------CKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAK 385
C + + + G L D++ H + L W + AK
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+ D R VHRD+ N+L+ K+ DFG KL EKE A G
Sbjct: 131 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLG-AEEKEYHAEG-----G 181
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL----------I 494
+P +++ ++ S++ T ++DV+++GV + EL+T G + I
Sbjct: 182 KVPIKWMALE--------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 233
Query: 495 RDDSEPTKMKSLITI---MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ E + TI M V W ++ D+ RP+ R+++ S++
Sbjct: 234 LEKGERLPQPPICTIDVYMIMVKCWMIDADS--RPKFRELIIEFSKM 278
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 102/251 (40%), Gaps = 72/251 (28%)
Query: 288 EEATNNFDESRIIGRGGFGNVYF----GLLGDRE---AAIKKMRSNKSKEFFAEL----- 335
E NN + R IG G FG V+ GLL A+K ++ S + A+
Sbjct: 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 336 --------------------KVLCKIHH------INVFISTFGNGSLSDHLHDPLL---- 365
K +C + +N F+ + ++ H L
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 366 ---KGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFG 422
G PL+ + IA A G+ Y+ ++ ++VHRD+ T N L+ + + K+ADFG
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFG 219
Query: 423 LVKL-----EERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVF 477
L + + + + + R ++PPE IF R+ TT++DV+
Sbjct: 220 LSRNIYSADYYKADGNDAIPIR------WMPPESIFYNRY-------------TTESDVW 260
Query: 478 AFGVVLAELIT 488
A+GVVL E+ +
Sbjct: 261 AYGVVLWEIFS 271
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 121/287 (42%), Gaps = 65/287 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKS----KEFFAELKVL--- 338
F + +++ G FG VY GL G++ AIK++R S KE E V+
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 339 -----------CKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAK 385
C + + + G L D++ H + L W + AK
Sbjct: 82 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 135
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+ D R VHRD+ N+L+ K+ DFGL KL EKE A G
Sbjct: 136 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG-AEEKEYHAEG-----G 186
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL----------I 494
+P +++ ++ S++ T ++DV+++GV + EL+T G + I
Sbjct: 187 KVPIKWMALE--------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 238
Query: 495 RDDSEPTKMKSLITI---MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ E + TI M V W ++ D+ RP+ R+++ S++
Sbjct: 239 LEKGERLPQPPICTIDVYMIMVKCWMIDADS--RPKFRELIIEFSKM 283
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 129/315 (40%), Gaps = 75/315 (23%)
Query: 274 LESERTIIFSLEEIEEATNN----------FDESRIIGRGGFGNVYFGLL---GDR---E 317
L ER ++ L EA N F + +++G G FG VY GL G++
Sbjct: 21 LLQERELVEPLTPSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP 80
Query: 318 AAIKKMRSNKS----KEFFAELKVL--------------CKIHHINVFISTFGNGSLSDH 359
AI ++R S KE E V+ C + + G L D+
Sbjct: 81 VAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDY 140
Query: 360 L--HDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAK 417
+ H + L W + AKG+ Y+ D R VHRD+ N+L+ K
Sbjct: 141 VREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 191
Query: 418 VADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVF 477
+ DFGL KL EKE A G +P +++ ++ S++ T ++DV+
Sbjct: 192 ITDFGLAKLLG-AEEKEYHAEG-----GKVPIKWMALE--------SILHRIYTHQSDVW 237
Query: 478 AFGVVLAELIT-GKRAL----------IRDDSEPTKMKSLITI---MAAVAEWCLNEDAV 523
++GV + EL+T G + I + E + TI M V W ++ D+
Sbjct: 238 SYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADS- 296
Query: 524 DRPEMRDIVAILSQI 538
RP+ R+++ S++
Sbjct: 297 -RPKFRELIIEFSKM 310
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 119/302 (39%), Gaps = 84/302 (27%)
Query: 293 NFDESRIIGRGGFGNVYFG--LLGDREAAIKKMRSNKSKEFFAELKVLCKIHHINVFIST 350
+F E +IG GGFG V+ + + IK+++ N K E+K L K+ H+N+
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE-REVKALAKLDHVNI---V 67
Query: 351 FGNGSLSDHLHDPLL---------------------KGHQPLTWTARTQIALDA------ 383
NG +DP KG R LD
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALEL 127
Query: 384 ----AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATR 439
KG++YIH + ++RD+K SNI L D + K+ DFGLV + ++ R
Sbjct: 128 FEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR----XR 180
Query: 440 LVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELI------------ 487
GT Y+ PE I + + + D++A G++LAEL+
Sbjct: 181 SKGTLRYMSPEQISSQDY-------------GKEVDLYALGLILAELLHVCDTAFETSKF 227
Query: 488 -TGKRALIRDDSEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITSTEWE 546
T R I D K K+L+ + L++ DRP S+I+ T T W+
Sbjct: 228 FTDLRDGIISDIFDKKEKTLLQKL-------LSKKPEDRPNT-------SEILRTLTVWK 273
Query: 547 AS 548
S
Sbjct: 274 KS 275
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 30/159 (18%)
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
KG++Y+H K +HRDIK +N+LL + K+ADFG+ + + ++ VGTP
Sbjct: 131 KGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAG---QLTDTQIKRNTFVGTP 184
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRA-----------L 493
++ PE I ++ +D +K D+++ G+ EL G+ L
Sbjct: 185 FWMAPEVI--QQSAYD-----------SKADIWSLGITAIELAKGEPPNSDMHPMRVLFL 231
Query: 494 IRDDSEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIV 532
I ++ PT + + CLN+D RP ++++
Sbjct: 232 IPKNNPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELL 270
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 94/225 (41%), Gaps = 40/225 (17%)
Query: 300 IGRGGFGNVYFGLLGDR-EAAIKKMR--SNKSKEFFAELKVLCKIHH------------- 343
+G G FG V+ + A+K M+ S + F AE V+ + H
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE 255
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + GSL D L QPL + A+G+ +I Y+HRD
Sbjct: 256 PIYIITEFMAKGSLLDFLKSDE-GSKQPLP--KLIDFSAQIAEGMAFIEQRN---YIHRD 309
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDM 461
++ +NIL+ L K+ADFGL ++ E + E A P + PE I F
Sbjct: 310 LRAANILVSASLVCKIADFGLARVIE---DNEYTAREGAKFPIKWTAPEAINFGSF---- 362
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSL 506
T K+DV++FG++L E++T R S P +++L
Sbjct: 363 ---------TIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 398
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 119/285 (41%), Gaps = 61/285 (21%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKS----KEFFAELKVL--- 338
F + +++G G FG VY GL G++ AIK++R S KE E V+
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 339 -----------CKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAK 385
C + + + G L D++ H + L W + AK
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+ D R VHRD+ N+L+ K+ DFG KL EKE A G
Sbjct: 131 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLG-AEEKEYHAEG-----G 181
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL----------I 494
+P +++ ++ S++ T ++DV+++GV + EL+T G + I
Sbjct: 182 KVPIKWMALE--------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 233
Query: 495 RDDSEPTKMKSLITI-MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ E + TI + + C DA RP+ R+++ S++
Sbjct: 234 LEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 278
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 120/287 (41%), Gaps = 65/287 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKS----KEFFAELKVL--- 338
F + +++ G FG VY GL G++ AIK++R S KE E V+
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 339 -----------CKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAK 385
C + + G L D++ H + L W + AK
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+ D R VHRD+ N+L+ K+ DFGL KL EKE A G
Sbjct: 129 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG-AEEKEYHAEG-----G 179
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL----------I 494
+P +++ ++ S++ T ++DV+++GV + EL+T G + I
Sbjct: 180 KVPIKWMALE--------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 231
Query: 495 RDDSEPTKMKSLITI---MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ E + TI M V W ++ D+ RP+ R+++ S++
Sbjct: 232 LEKGERLPQPPICTIDVYMIMVKCWMIDADS--RPKFRELIIEFSKM 276
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 120/287 (41%), Gaps = 65/287 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKS----KEFFAELKVL--- 338
F + +++G G FG VY GL G++ AIK++R S KE E V+
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 339 -----------CKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAK 385
C + + G L D++ H + L W + AK
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+ D R VHRD+ N+L+ K+ DFG KL EKE A G
Sbjct: 129 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLG-AEEKEYHAEG-----G 179
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL----------I 494
+P +++ ++ S++ T ++DV+++GV + EL+T G + I
Sbjct: 180 KVPIKWMALE--------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 231
Query: 495 RDDSEPTKMKSLITI---MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ E + TI M V W ++ D+ RP+ R+++ S++
Sbjct: 232 LEKGERLPQPPICTIDVYMIMVKCWMIDADS--RPKFRELIIEFSKM 276
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 120/287 (41%), Gaps = 65/287 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKS----KEFFAELKVL--- 338
F + +++ G FG VY GL G++ AIK++R S KE E V+
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 339 -----------CKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAK 385
C + + G L D++ H + L W + AK
Sbjct: 82 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 135
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+ D R VHRD+ N+L+ K+ DFGL KL EKE A G
Sbjct: 136 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG-AEEKEYHAEG-----G 186
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL----------I 494
+P +++ ++ S++ T ++DV+++GV + EL+T G + I
Sbjct: 187 KVPIKWMALE--------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 238
Query: 495 RDDSEPTKMKSLITI---MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ E + TI M V W ++ D+ RP+ R+++ S++
Sbjct: 239 LEKGERLPQPPICTIDVYMIMVKCWMIDADS--RPKFRELIIEFSKM 283
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 120/287 (41%), Gaps = 65/287 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKS----KEFFAELKVL--- 338
F + +++G G FG VY GL G++ AIK++R S KE E V+
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 339 -----------CKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAK 385
C + + G L D++ H + L W + AK
Sbjct: 82 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 135
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+ D R VHRD+ N+L+ K+ DFG KL EKE A G
Sbjct: 136 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLG-AEEKEYHAEG-----G 186
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL----------I 494
+P +++ ++ S++ T ++DV+++GV + EL+T G + I
Sbjct: 187 KVPIKWMALE--------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 238
Query: 495 RDDSEPTKMKSLITI---MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ E + TI M V W ++ D+ RP+ R+++ S++
Sbjct: 239 LEKGERLPQPPICTIDVYMIMVKCWMIDADS--RPKFRELIIEFSKM 283
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 118/285 (41%), Gaps = 61/285 (21%)
Query: 292 NNFDESRIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKS----KEFFAELKVL--- 338
F + +++G G FG VY GL G++ AIK++R S KE E V+
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 339 -----------CKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAK 385
C + + G L D++ H + L W + AK
Sbjct: 77 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+ D R VHRD+ N+L+ K+ DFG KL EKE A G
Sbjct: 131 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLG-AEEKEYHAEG-----G 181
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRAL----------I 494
+P +++ ++ S++ T ++DV+++GV + EL+T G + I
Sbjct: 182 KVPIKWMALE--------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 233
Query: 495 RDDSEPTKMKSLITI-MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ E + TI + + C DA RP+ R+++ S++
Sbjct: 234 LEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 278
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 93/224 (41%), Gaps = 49/224 (21%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDRE--AAIKKM------RSNKSKEFFAELKVLCKI 341
A +F+ R +G+G FGNVY R+ A+K + ++ + E+++ +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 342 HHINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD-- 392
H N+ L + HD L+ + PL R L D + YI +
Sbjct: 63 RHPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 115
Query: 393 ------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
H+K R +HRDIK N+LL K+ADFG + T L GT Y
Sbjct: 116 NALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTLDY 169
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
LPPE I + MH K D+++ GV+ E + GK
Sbjct: 170 LPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 200
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 121/276 (43%), Gaps = 52/276 (18%)
Query: 299 IIGRGGFGNVYFGLL---GDREA--AIKKMRSN----KSKEFFAELKVLCKIHHIN---- 345
+IG G FG V G L G +E+ AIK ++ + +EF +E ++ + H N
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 346 --VFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIAL-----DAAKGIEYIHDHTKARY 398
V ++ L++ + + L L T I L A G+ Y+ + + Y
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMS---Y 137
Query: 399 VHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGT-P-GYLPPEYIFVKR 456
VHRD+ NIL++ L KV+DFGL + E + + L G P + PE I ++
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRK 197
Query: 457 FRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKR------------ALIRDDSEPTKM 503
F T+ +D +++G+V+ E+++ G+R A+ +D P
Sbjct: 198 F-------------TSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPP 244
Query: 504 KSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIM 539
++ + + C +D RP +V+ L +++
Sbjct: 245 DCPTSLHQLMLD-CWQKDRNARPRFPQVVSALDKMI 279
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 43/225 (19%)
Query: 292 NNFDESRIIGRGGFGNVYFGLLGDRE--AAIKKMRSNKSK----EFFAELKVLCKIHHIN 345
++++ +IG G V ++ AIK++ K + E E++ + + HH N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 346 V--FISTF-------------GNGSLSDHLHDPLLKGHQP---LTWTARTQIALDAAKGI 387
+ + ++F GS+ D + + KG L + I + +G+
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNE--KEMLATRLVGTPG 445
EY+H + + +HRD+K NILL + ++ADFG+ + + + VGTP
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 446 YLPPEYI-FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
++ PE + V+ + F K D+++FG+ EL TG
Sbjct: 187 WMAPEVMEQVRGYDF-------------KADIWSFGITAIELATG 218
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 45/222 (20%)
Query: 299 IIGRGGFGNVYFGLLGDREAAIKKMRSNKSKEFFAELKV----LCKIHHINVFI------ 348
+IGRG +G VY G L +R A+K + F E + L + +I FI
Sbjct: 20 LIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERV 79
Query: 349 ------------STFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH----- 391
+ NGSL +L W + ++A +G+ Y+H
Sbjct: 80 TADGRMEYLLVMEYYPNGSLXKYL------SLHTSDWVSSCRLAHSVTRGLAYLHTELPR 133
Query: 392 -DHTKARYVHRDIKTSNILLDDGLRAKVADFGL-VKLEE----RTNEKEMLATRLVGTPG 445
DH K HRD+ + N+L+ + ++DFGL ++L R E++ A VGT
Sbjct: 134 GDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIR 193
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELI 487
Y+ PE + D S++ ++ D++A G++ E+
Sbjct: 194 YMAPEVLEGAVNLRDXESALKQV------DMYALGLIYWEIF 229
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 43/225 (19%)
Query: 292 NNFDESRIIGRGGFGNVYFGLLGDRE--AAIKKMRSNKSK----EFFAELKVLCKIHHIN 345
++++ +IG G V ++ AIK++ K + E E++ + + HH N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 346 V--FISTF-------------GNGSLSDHLHDPLLKGHQP---LTWTARTQIALDAAKGI 387
+ + ++F GS+ D + + KG L + I + +G+
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNE--KEMLATRLVGTPG 445
EY+H + + +HRD+K NILL + ++ADFG+ + + + VGTP
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 446 YLPPEYI-FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
++ PE + V+ + F K D+++FG+ EL TG
Sbjct: 192 WMAPEVMEQVRGYDF-------------KADIWSFGITAIELATG 223
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 19/106 (17%)
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
+G++Y+H++ R +HRD+K N+ L+D + K+ DFGL E E++ L GTP
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK---KXLCGTP 206
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y+ PE + K F++ D+++ G +L L+ GK
Sbjct: 207 NYIAPEVLCKKGHSFEV-------------DIWSLGCILYTLLVGK 239
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 45/243 (18%)
Query: 272 TVLESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN 326
T+ ER + E I E + +G G +G+V + + + A+KK+
Sbjct: 28 TMSHKERPTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRP 87
Query: 327 -----KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH----------- 368
+K + EL++L + H NV + F + + +D L H
Sbjct: 88 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVK 147
Query: 369 -QPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLE 427
Q LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL
Sbjct: 148 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 201
Query: 428 ERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELI 487
R + EM T V T Y PE I + ++M D+++ G ++AEL+
Sbjct: 202 -RHTDDEM--TGYVATRWYRAPE-IMLNWMHYNM-----------TVDIWSVGCIMAELL 246
Query: 488 TGK 490
TG+
Sbjct: 247 TGR 249
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 118/275 (42%), Gaps = 62/275 (22%)
Query: 300 IGRGGFGNVYFG-LLGDREAAIKKMR--SNKSKEFFAELKVLCKIHH------------- 343
+G G FG V +G G + AIK ++ S EF E KV+ + H
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 344 --INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHR 401
I + NG L ++L + H+ T ++ D + +EY+ +++HR
Sbjct: 77 RPIFIITEYMANGCLLNYLRE---MRHRFQT-QQLLEMCKDVCEAMEYLES---KQFLHR 129
Query: 402 DIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFD 460
D+ N L++D KV+DFGL + + E ++R P + PPE + +F
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRY---VLDDEYTSSRGSKFPVRWSPPEVLMYSKF--- 183
Query: 461 MHSSVMELQVTTKTDVFAFGVVLAELIT-GKRALIRDDSEPT---------------KMK 504
++K+D++AFGV++ E+ + GK R + T +
Sbjct: 184 ----------SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE 233
Query: 505 SLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIM 539
+ TIM + C +E A +RP + +++ + +M
Sbjct: 234 KVYTIMYS----CWHEKADERPTFKILLSNILDVM 264
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 19/106 (17%)
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
+G++Y+H++ R +HRD+K N+ L+D + K+ DFGL E E++ L GTP
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK---KTLCGTP 206
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y+ PE + K F++ D+++ G +L L+ GK
Sbjct: 207 NYIAPEVLCKKGHSFEV-------------DIWSLGCILYTLLVGK 239
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 38/211 (18%)
Query: 300 IGRGGFGNV---YFGLLGDREAAIKKMRS------NKSKEFFAELKVLCKIHH---INVF 347
+G+G FG+V + LGD A+ ++ ++ ++F E+++L +H +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 348 ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAA----------KGIEYIHDHTKAR 397
++G G S L L + R + LDA+ KG+EY+ R
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL---GSRR 147
Query: 398 YVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRF 457
VHRD+ NIL++ K+ADFGL KL +K+ R PG P IF
Sbjct: 148 CVHRDLAARNILVESEAHVKIADFGLAKL--LPLDKDYYVVR---EPGQSP---IF---- 195
Query: 458 RFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ S+ + + ++DV++FGVVL EL T
Sbjct: 196 -WYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 45/217 (20%)
Query: 294 FDESRIIGRGGFGNVYFGLLGD--REAAIKKMRSNKS-KEFFAELKVL--CKIHHINVFI 348
FD +G G +G+VY + + + AIK++ +E E+ ++ C H+ +
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYY 90
Query: 349 STF-------------GNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTK 395
++ G GS+SD + L+ ++ LT I KG+EY+H
Sbjct: 91 GSYFKNTDLWIVMEYCGAGSVSDIIR---LR-NKTLTEDEIATILQSTLKGLEYLH---F 143
Query: 396 ARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATR--LVGTPGYLPPEYIF 453
R +HRDIK NILL+ AK+ADFG+ + +A R ++GTP ++ PE I
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVA-----GQLTDXMAKRNXVIGTPFWMAPEVI- 197
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
E+ D+++ G+ E+ GK
Sbjct: 198 ------------QEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 38/211 (18%)
Query: 300 IGRGGFGNV---YFGLLGDREAAIKKMRS------NKSKEFFAELKVLCKIHH---INVF 347
+G+G FG+V + LGD A+ ++ ++ ++F E+++L +H +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 348 ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAA----------KGIEYIHDHTKAR 397
++G G S L L + R + LDA+ KG+EY+ R
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL---GSRR 134
Query: 398 YVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRF 457
VHRD+ NIL++ K+ADFGL KL +K+ R PG P IF
Sbjct: 135 CVHRDLAARNILVESEAHVKIADFGLAKL--LPLDKDYYVVR---EPGQSP---IF---- 182
Query: 458 RFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ S+ + + ++DV++FGVVL EL T
Sbjct: 183 -WYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 19/106 (17%)
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
+G++Y+H++ R +HRD+K N+ L+D + K+ DFGL E E++ L GTP
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK---KDLCGTP 206
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y+ PE + K F++ D+++ G +L L+ GK
Sbjct: 207 NYIAPEVLCKKGHSFEV-------------DIWSLGCILYTLLVGK 239
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 38/211 (18%)
Query: 300 IGRGGFGNV---YFGLLGDREAAIKKMRS------NKSKEFFAELKVLCKIHH---INVF 347
+G+G FG+V + LGD A+ ++ ++ ++F E+++L +H +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 348 ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAA----------KGIEYIHDHTKAR 397
++G G S L L + R + LDA+ KG+EY+ R
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL---GSRR 135
Query: 398 YVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRF 457
VHRD+ NIL++ K+ADFGL KL +K+ R PG P IF
Sbjct: 136 CVHRDLAARNILVESEAHVKIADFGLAKL--LPLDKDYYVVR---EPGQSP---IF---- 183
Query: 458 RFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ S+ + + ++DV++FGVVL EL T
Sbjct: 184 -WYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 40/214 (18%)
Query: 300 IGRGGFGNVYFGLLGDREAAIKKMRSNKSKEFFAELK----VLCKIHHINVFIST----- 350
+G+G +G V+ G A+K S K +F E + V+ + +I FI++
Sbjct: 45 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 104
Query: 351 ------------FGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH-----DH 393
GSL D+L L L +I L A G+ ++H
Sbjct: 105 HSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCL------RIVLSIASGLAHLHIEIFGTQ 158
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGL-VKLEERTNEKEMLATRLVGTPGYLPPEYI 452
K HRD+K+ NIL+ + +AD GL V + TN+ ++ VGT Y+ PE +
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE-V 217
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
+ + D S + D++AFG+VL E+
Sbjct: 218 LDETIQVDCFDSY------KRVDIWAFGLVLWEV 245
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 50/217 (23%)
Query: 300 IGRGGFGNV---YFGLLGDREAAIKKMRS------NKSKEFFAELKVLCKIH-------- 342
+G+G FG+V + LGD A+ ++ ++ ++F E+++L +H
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 343 ---------HINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
+ + + +G L D L H L + L ++++ KG+EY+
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEYLG 128
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEY 451
R VHRD+ NIL++ K+ADFGL KL + +V PG P
Sbjct: 129 SR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD-----XXVVREPGQSP--- 177
Query: 452 IFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
IF + S+ + + ++DV++FGVVL EL T
Sbjct: 178 IF-----WYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 40/214 (18%)
Query: 300 IGRGGFGNVYFGLLGDREAAIKKMRSNKSKEFFAELK----VLCKIHHINVFIST----- 350
+G+G +G V+ G A+K S K +F E + V+ + +I FI++
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 75
Query: 351 ------------FGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH-----DH 393
GSL D+L L L +I L A G+ ++H
Sbjct: 76 HSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCL------RIVLSIASGLAHLHIEIFGTQ 129
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGL-VKLEERTNEKEMLATRLVGTPGYLPPEYI 452
K HRD+K+ NIL+ + +AD GL V + TN+ ++ VGT Y+ PE +
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE-V 188
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
+ + D S + D++AFG+VL E+
Sbjct: 189 LDETIQVDCFDSY------KRVDIWAFGLVLWEV 216
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 40/214 (18%)
Query: 300 IGRGGFGNVYFGLLGDREAAIKKMRSNKSKEFFAELKVL--CKIHHINV--FIST----- 350
+G+G +G V+ G A+K S K +F E ++ + H N+ FI++
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 75
Query: 351 ------------FGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH-----DH 393
GSL D+L L L +I L A G+ ++H
Sbjct: 76 HSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCL------RIVLSIASGLAHLHIEIFGTQ 129
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGL-VKLEERTNEKEMLATRLVGTPGYLPPEYI 452
K HRD+K+ NIL+ + +AD GL V + TN+ ++ VGT Y+ PE +
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE-V 188
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
+ + D S + D++AFG+VL E+
Sbjct: 189 LDETIQVDCFDSY------KRVDIWAFGLVLWEV 216
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 116/274 (42%), Gaps = 60/274 (21%)
Query: 300 IGRGGFGNVYFG-LLGDREAAIKKMR--SNKSKEFFAELKVLCKIHH------------- 343
+G G FG V +G G + AIK ++ S EF E KV+ + H
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91
Query: 344 --INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHR 401
I + NG L ++L + H+ T ++ D + +EY+ +++HR
Sbjct: 92 RPIFIITEYMANGCLLNYLRE---MRHRFQT-QQLLEMCKDVCEAMEYLES---KQFLHR 144
Query: 402 DIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDM 461
D+ N L++D KV+DFGL + E + ++ + PPE + +F
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKF--PVRWSPPEVLMYSKF---- 198
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELIT-GKRALIRDDSEPT---------------KMKS 505
++K+D++AFGV++ E+ + GK R + T +
Sbjct: 199 ---------SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEK 249
Query: 506 LITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIM 539
+ TIM + C +E A +RP + +++ + +M
Sbjct: 250 VYTIMYS----CWHEKADERPTFKILLSNILDVM 279
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 42/208 (20%)
Query: 300 IGRGGFGNVYFGLL-GDREAAIKKMR--SNKSKEFFAELKVLCKIHH------------- 343
+G G FG V G G + A+K ++ S EFF E + + K+ H
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKE 75
Query: 344 --INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHR 401
I + NG L ++L KG +P + ++ D +G+ ++ H +++HR
Sbjct: 76 YPIYIVTEYISNGCLLNYLRSHG-KGLEP---SQLLEMCYDVCEGMAFLESH---QFIHR 128
Query: 402 DIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG-YLPPEYIFVKRFRFD 460
D+ N L+D L KV+DFG+ + +L + V + G P ++ + F +
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRY--------VLDDQYVSSVGTKFPVKWSAPEVFHYF 180
Query: 461 MHSSVMELQVTTKTDVFAFGVVLAELIT 488
+SS K+DV+AFG+++ E+ +
Sbjct: 181 KYSS--------KSDVWAFGILMWEVFS 200
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 47/220 (21%)
Query: 299 IIGRGGFGNVYFGLL---GDREA--AIKKMRSN----KSKEFFAELKVLCKIHHINVF-- 347
+IG G FG V G L G +E+ AIK ++ + +EF +E ++ + H N+
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 348 ------------ISTF-GNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHT 394
++ F NG+L L L G T + A G+ Y+ + +
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLR--LNDGQ--FTVIQLVGMLRGIASGMRYLAEMS 138
Query: 395 KARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGT-P-GYLPPEYI 452
YVHRD+ NIL++ L KV+DFGL + E + + L G P + PE I
Sbjct: 139 ---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAI 195
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKR 491
++F T+ +D +++G+V+ E+++ G+R
Sbjct: 196 AFRKF-------------TSASDAWSYGIVMWEVMSFGER 222
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 48/222 (21%)
Query: 298 RIIGRGGFGNVYFGLLGDR-------EAAIKKMRSNKSKE----FFAELKVLCKIHHINV 346
R +G G FG VY G + + A+K + S++ F E ++ K++H N+
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNI 96
Query: 347 ---------------FISTFGNGSLSDHLHDPLLKGHQP--LTWTARTQIALDAAKGIEY 389
+ G L L + + QP L +A D A G +Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 390 IHDHTKARYVHRDIKTSNILL---DDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+ ++ ++HRDI N LL G AK+ DFG+ + R + ++ +
Sbjct: 157 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV-KW 212
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+PPE + ME T+KTD ++FGV+L E+ +
Sbjct: 213 MPPE-------------AFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 19/106 (17%)
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
+G++Y+H++ R +HRD+K N+ L+D + K+ DFGL E E++ L GTP
Sbjct: 137 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK---KDLCGTP 190
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y+ PE + K F++ D+++ G +L L+ GK
Sbjct: 191 NYIAPEVLCKKGHSFEV-------------DIWSLGCILYTLLVGK 223
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 48/222 (21%)
Query: 298 RIIGRGGFGNVYFGLLGDR-------EAAIKKMRSNKSKE----FFAELKVLCKIHHINV 346
R +G G FG VY G + + A+K + S++ F E ++ K++H N+
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNI 110
Query: 347 ---------------FISTFGNGSLSDHLHDPLLKGHQP--LTWTARTQIALDAAKGIEY 389
+ G L L + + QP L +A D A G +Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 390 IHDHTKARYVHRDIKTSNILL---DDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+ ++ ++HRDI N LL G AK+ DFG+ + R + ++ +
Sbjct: 171 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV-KW 226
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+PPE + ME T+KTD ++FGV+L E+ +
Sbjct: 227 MPPE-------------AFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 91/222 (40%), Gaps = 48/222 (21%)
Query: 298 RIIGRGGFGNVYFGLLGDR-------EAAIKKMRSNKSKE----FFAELKVLCKIHHINV 346
R +G G FG VY G + + A+K + S++ F E ++ K +H N+
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNI 110
Query: 347 ---------------FISTFGNGSLSDHLHDPLLKGHQP--LTWTARTQIALDAAKGIEY 389
+ G L L + + QP L +A D A G +Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 390 IHDHTKARYVHRDIKTSNILL---DDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+ ++ ++HRDI N LL G AK+ DFG+ + R + ++ +
Sbjct: 171 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV-KW 226
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+PPE + ME T+KTD ++FGV+L E+ +
Sbjct: 227 MPPE-------------AFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 91/222 (40%), Gaps = 48/222 (21%)
Query: 298 RIIGRGGFGNVYFGLLGDR-------EAAIKKMRSNKSKE----FFAELKVLCKIHHINV 346
R +G G FG VY G + + A+K + S++ F E ++ K +H N+
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 347 ---------------FISTFGNGSLSDHLHDPLLKGHQP--LTWTARTQIALDAAKGIEY 389
+ G L L + + QP L +A D A G +Y
Sbjct: 96 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 390 IHDHTKARYVHRDIKTSNILL---DDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+ ++ ++HRDI N LL G AK+ DFG+ + R + ++ +
Sbjct: 156 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV-KW 211
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+PPE + ME T+KTD ++FGV+L E+ +
Sbjct: 212 MPPE-------------AFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 91/222 (40%), Gaps = 48/222 (21%)
Query: 298 RIIGRGGFGNVYFGLLGDR-------EAAIKKMRSNKSKE----FFAELKVLCKIHHINV 346
R +G G FG VY G + + A+K + S++ F E ++ K +H N+
Sbjct: 53 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 112
Query: 347 ---------------FISTFGNGSLSDHLHDPLLKGHQP--LTWTARTQIALDAAKGIEY 389
+ G L L + + QP L +A D A G +Y
Sbjct: 113 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 172
Query: 390 IHDHTKARYVHRDIKTSNILL---DDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+ ++ ++HRDI N LL G AK+ DFG+ + R + ++ +
Sbjct: 173 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV-KW 228
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+PPE + ME T+KTD ++FGV+L E+ +
Sbjct: 229 MPPE-------------AFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 49/238 (20%)
Query: 283 SLEEIEEAT-NNFDESRIIGRGGFGNVYFGLLGDR-------EAAIKKMRSNKSKE---- 330
S+ +++E N R +G G FG VY G + + A+K + S++
Sbjct: 12 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 71
Query: 331 FFAELKVLCKIHHINV---------------FISTFGNGSLSDHLHDPLLKGHQP--LTW 373
F E ++ K +H N+ + G L L + + QP L
Sbjct: 72 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 131
Query: 374 TARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILL---DDGLRAKVADFGLVKLEERT 430
+A D A G +Y+ ++ ++HRDI N LL G AK+ DFG+ + R
Sbjct: 132 LDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 188
Query: 431 NEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ ++ ++PPE + ME T+KTD ++FGV+L E+ +
Sbjct: 189 SYYRKGGCAMLPV-KWMPPE-------------AFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 29/157 (18%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G +Y+H + R +HRD+K N+ L++ L K+ DFGL E E++ + L GTP
Sbjct: 153 GCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPN 206
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRA----------LIR 495
Y+ PE + K F++ DV++ G ++ L+ GK L
Sbjct: 207 YIAPEVLSKKGHSFEV-------------DVWSIGCIMYTLLVGKPPFETSCLKETYLRI 253
Query: 496 DDSEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIV 532
+E + K + + A++ + L D RP + +++
Sbjct: 254 KKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 290
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 29/157 (18%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G +Y+H + R +HRD+K N+ L++ L K+ DFGL E E++ + L GTP
Sbjct: 151 GCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPN 204
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRA----------LIR 495
Y+ PE + K F++ DV++ G ++ L+ GK L
Sbjct: 205 YIAPEVLSKKGHSFEV-------------DVWSIGCIMYTLLVGKPPFETSCLKETYLRI 251
Query: 496 DDSEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIV 532
+E + K + + A++ + L D RP + +++
Sbjct: 252 KKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 288
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 96/226 (42%), Gaps = 53/226 (23%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDREA----AIKKM------RSNKSKEFFAELKVLC 339
A +F+ R +G+G FGNVY L ++++ A+K + ++ + E+++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 340 KIHHINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD 392
+ H N+ L + HD L+ + PL R L D + YI +
Sbjct: 64 HLRHPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 393 --------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
H+K R +HRDIK N+LL K+ADFG + T L GT
Sbjct: 117 LANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTELCGTL 170
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
YLPPE I + MH K D+++ GV+ E + GK
Sbjct: 171 DYLPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 203
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 91/222 (40%), Gaps = 48/222 (21%)
Query: 298 RIIGRGGFGNVYFGLLGDR-------EAAIKKMRSNKSKE----FFAELKVLCKIHHINV 346
R +G G FG VY G + + A+K + S++ F E ++ K +H N+
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 347 ---------------FISTFGNGSLSDHLHDPLLKGHQP--LTWTARTQIALDAAKGIEY 389
+ G L L + + QP L +A D A G +Y
Sbjct: 96 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 390 IHDHTKARYVHRDIKTSNILL---DDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+ ++ ++HRDI N LL G AK+ DFG+ + R + ++ +
Sbjct: 156 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV-KW 211
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+PPE + ME T+KTD ++FGV+L E+ +
Sbjct: 212 MPPE-------------AFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 91/222 (40%), Gaps = 48/222 (21%)
Query: 298 RIIGRGGFGNVYFGLLGDR-------EAAIKKMRSNKSKE----FFAELKVLCKIHHINV 346
R +G G FG VY G + + A+K + S++ F E ++ K +H N+
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 96
Query: 347 ---------------FISTFGNGSLSDHLHDPLLKGHQP--LTWTARTQIALDAAKGIEY 389
+ G L L + + QP L +A D A G +Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 390 IHDHTKARYVHRDIKTSNILL---DDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+ ++ ++HRDI N LL G AK+ DFG+ + R + ++ +
Sbjct: 157 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV-KW 212
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+PPE + ME T+KTD ++FGV+L E+ +
Sbjct: 213 MPPE-------------AFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 29/157 (18%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G +Y+H + R +HRD+K N+ L++ L K+ DFGL E E++ + L GTP
Sbjct: 127 GCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPN 180
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRA----------LIR 495
Y+ PE + K F++ DV++ G ++ L+ GK L
Sbjct: 181 YIAPEVLSKKGHSFEV-------------DVWSIGCIMYTLLVGKPPFETSCLKETYLRI 227
Query: 496 DDSEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIV 532
+E + K + + A++ + L D RP + +++
Sbjct: 228 KKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 264
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 91/222 (40%), Gaps = 48/222 (21%)
Query: 298 RIIGRGGFGNVYFGLLGDR-------EAAIKKMRSNKSKE----FFAELKVLCKIHHINV 346
R +G G FG VY G + + A+K + S++ F E ++ K +H N+
Sbjct: 43 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 102
Query: 347 ---------------FISTFGNGSLSDHLHDPLLKGHQP--LTWTARTQIALDAAKGIEY 389
+ G L L + + QP L +A D A G +Y
Sbjct: 103 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 162
Query: 390 IHDHTKARYVHRDIKTSNILL---DDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+ ++ ++HRDI N LL G AK+ DFG+ + R + ++ +
Sbjct: 163 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV-KW 218
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+PPE + ME T+KTD ++FGV+L E+ +
Sbjct: 219 MPPE-------------AFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 91/222 (40%), Gaps = 48/222 (21%)
Query: 298 RIIGRGGFGNVYFGLLGDR-------EAAIKKMRSNKSKE----FFAELKVLCKIHHINV 346
R +G G FG VY G + + A+K + S++ F E ++ K +H N+
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 110
Query: 347 ---------------FISTFGNGSLSDHLHDPLLKGHQP--LTWTARTQIALDAAKGIEY 389
+ G L L + + QP L +A D A G +Y
Sbjct: 111 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 390 IHDHTKARYVHRDIKTSNILL---DDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+ ++ ++HRDI N LL G AK+ DFG+ + R + ++ +
Sbjct: 171 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV-KW 226
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+PPE + ME T+KTD ++FGV+L E+ +
Sbjct: 227 MPPE-------------AFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 90/222 (40%), Gaps = 48/222 (21%)
Query: 298 RIIGRGGFGNVYFGLLGDR-------EAAIKKMRSNKSKE----FFAELKVLCKIHHINV 346
R +G G FG VY G + + A+K + S++ F E ++ K +H N+
Sbjct: 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 136
Query: 347 ---------------FISTFGNGSLSDHLHDPLLKGHQP--LTWTARTQIALDAAKGIEY 389
+ G L L + + QP L +A D A G +Y
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196
Query: 390 IHDHTKARYVHRDIKTSNILL---DDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+ ++ ++HRDI N LL G AK+ DFG+ + R ++ +
Sbjct: 197 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV-KW 252
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+PPE + ME T+KTD ++FGV+L E+ +
Sbjct: 253 MPPE-------------AFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 49/224 (21%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDRE--AAIKKM------RSNKSKEFFAELKVLCKI 341
A +F+ R +G+G FGNVY + A+K + ++ + E+++ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 342 HHINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD-- 392
H N+ L + HD L+ + PL R L D + YI +
Sbjct: 92 RHPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 144
Query: 393 ------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
H+K R +HRDIK N+LL K+ADFG + T L GT Y
Sbjct: 145 NALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTLDY 198
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
LPPE I + MH K D+++ GV+ E + GK
Sbjct: 199 LPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 229
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 90/222 (40%), Gaps = 48/222 (21%)
Query: 298 RIIGRGGFGNVYFGLLGDR-------EAAIKKMRSNKSKE----FFAELKVLCKIHHINV 346
R +G G FG VY G + + A+K + S++ F E ++ K +H N+
Sbjct: 54 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 113
Query: 347 ---------------FISTFGNGSLSDHLHDPLLKGHQP--LTWTARTQIALDAAKGIEY 389
+ G L L + + QP L +A D A G +Y
Sbjct: 114 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 173
Query: 390 IHDHTKARYVHRDIKTSNILL---DDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+ ++ ++HRDI N LL G AK+ DFG+ + R ++ +
Sbjct: 174 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV-KW 229
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+PPE + ME T+KTD ++FGV+L E+ +
Sbjct: 230 MPPE-------------AFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 44/237 (18%)
Query: 316 REAAIKKM--RSNKSKEF-FAELKVLCKIHHINVFISTFGNGSLSDHLHDPL--LKG--- 367
++ A+KKM R + +E F E+ ++ HH NV + + + + D L + L+G
Sbjct: 71 KQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNV-VDMYSSYLVGDELWVVMEFLEGGAL 129
Query: 368 -----HQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFG 422
H + + L + + Y+H+ +HRDIK+ +ILL R K++DFG
Sbjct: 130 TDIVTHTRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFG 186
Query: 423 LVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVV 482
+ K LVGTP ++ PE I L T+ D+++ G++
Sbjct: 187 FCAQVSKEVPKR---KXLVGTPYWMAPEVI-------------SRLPYGTEVDIWSLGIM 230
Query: 483 LAELITGK---------RALIR-DDSEPTKMKSLITIMAAVAEWCLNEDAVDRPEMR 529
+ E+I G+ +A+ R DS P ++K L + ++V L+ V P R
Sbjct: 231 VIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKV-SSVLRGFLDLMLVREPSQR 286
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 29/157 (18%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G +Y+H + R +HRD+K N+ L++ L K+ DFGL E E++ L GTP
Sbjct: 129 GCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK---KTLCGTPN 182
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRA----------LIR 495
Y+ PE + K F++ DV++ G ++ L+ GK L
Sbjct: 183 YIAPEVLSKKGHSFEV-------------DVWSIGCIMYTLLVGKPPFETSCLKETYLRI 229
Query: 496 DDSEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIV 532
+E + K + + A++ + L D RP + +++
Sbjct: 230 KKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 29/157 (18%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G +Y+H + R +HRD+K N+ L++ L K+ DFGL E E++ L GTP
Sbjct: 133 GCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK---KTLCGTPN 186
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRA----------LIR 495
Y+ PE + K F++ DV++ G ++ L+ GK L
Sbjct: 187 YIAPEVLSKKGHSFEV-------------DVWSIGCIMYTLLVGKPPFETSCLKETYLRI 233
Query: 496 DDSEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIV 532
+E + K + + A++ + L D RP + +++
Sbjct: 234 KKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 270
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 91/222 (40%), Gaps = 48/222 (21%)
Query: 298 RIIGRGGFGNVYFGLLGDR-------EAAIKKMRSNKSKE----FFAELKVLCKIHHINV 346
R +G G FG VY G + + A+K + S++ F E ++ K +H N+
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 96
Query: 347 ---------------FISTFGNGSLSDHLHDPLLKGHQP--LTWTARTQIALDAAKGIEY 389
+ G L L + + QP L +A D A G +Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 390 IHDHTKARYVHRDIKTSNILL---DDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+ ++ ++HRDI N LL G AK+ DFG+ + R + ++ +
Sbjct: 157 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPV-KW 212
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+PPE + ME T+KTD ++FGV+L E+ +
Sbjct: 213 MPPE-------------AFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 29/157 (18%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G +Y+H + R +HRD+K N+ L++ L K+ DFGL E E++ L GTP
Sbjct: 129 GCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK---KTLCGTPN 182
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRA----------LIR 495
Y+ PE + K F++ DV++ G ++ L+ GK L
Sbjct: 183 YIAPEVLSKKGHSFEV-------------DVWSIGCIMYTLLVGKPPFETSCLKETYLRI 229
Query: 496 DDSEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIV 532
+E + K + + A++ + L D RP + +++
Sbjct: 230 KKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 91/222 (40%), Gaps = 48/222 (21%)
Query: 298 RIIGRGGFGNVYFGLLGDR-------EAAIKKMRSNKSKE----FFAELKVLCKIHHINV 346
R +G G FG VY G + + A+K + S++ F E ++ K +H N+
Sbjct: 63 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 122
Query: 347 ---------------FISTFGNGSLSDHLHDPLLKGHQP--LTWTARTQIALDAAKGIEY 389
+ G L L + + QP L +A D A G +Y
Sbjct: 123 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 182
Query: 390 IHDHTKARYVHRDIKTSNILL---DDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+ ++ ++HRDI N LL G AK+ DFG+ + R + ++ +
Sbjct: 183 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV-KW 238
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+PPE + ME T+KTD ++FGV+L E+ +
Sbjct: 239 MPPE-------------AFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 49/224 (21%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDRE--AAIKKM------RSNKSKEFFAELKVLCKI 341
A +F+ R +G+G FGNVY + A+K + ++ + E+++ +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 342 HHINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD-- 392
H N+ L + HD L+ + PL R L D + YI +
Sbjct: 83 RHPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 135
Query: 393 ------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
H+K R +HRDIK N+LL K+ADFG + T L GT Y
Sbjct: 136 NALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTLDY 189
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
LPPE I + MH K D+++ GV+ E + GK
Sbjct: 190 LPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 220
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 49/224 (21%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDRE--AAIKKM------RSNKSKEFFAELKVLCKI 341
A +F+ R +G+G FGNVY + A+K + ++ + E+++ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 342 HHINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD-- 392
H N+ L + HD L+ + PL R L D + YI +
Sbjct: 69 RHPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 121
Query: 393 ------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
H+K R +HRDIK N+LL K+ADFG + T L GT Y
Sbjct: 122 NALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTLDY 175
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
LPPE I + MH K D+++ GV+ E + GK
Sbjct: 176 LPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 206
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 96/226 (42%), Gaps = 53/226 (23%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDREA----AIKKM------RSNKSKEFFAELKVLC 339
A +F+ R +G+G FGNVY L ++++ A+K + ++ + E+++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 340 KIHHINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD 392
+ H N+ L + HD L+ + PL R L D + YI +
Sbjct: 64 HLRHPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 393 --------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
H+K R +HRDIK N+LL K+ADFG + T L GT
Sbjct: 117 LANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTL 170
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
YLPPE I + MH K D+++ GV+ E + GK
Sbjct: 171 DYLPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 203
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 96/226 (42%), Gaps = 53/226 (23%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDREA----AIKKM------RSNKSKEFFAELKVLC 339
A +F+ R +G+G FGNVY L ++++ A+K + ++ + E+++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 340 KIHHINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD 392
+ H N+ L + HD L+ + PL R L D + YI +
Sbjct: 69 HLRHPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 393 --------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
H+K R +HRDIK N+LL K+ADFG + T L GT
Sbjct: 122 LANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTL 175
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
YLPPE I + MH K D+++ GV+ E + GK
Sbjct: 176 DYLPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 208
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 43/209 (20%)
Query: 300 IGRGGFGNVYFGLLGDR-EAAIKKMRSN--KSKEFFAELKVLCKIHH------------- 343
+G G FG V+ G + + A+K ++ + F E ++ + H
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTRE 80
Query: 344 --INVFISTFGNGSLSDHLH-DPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
I + GSL D L D K P QIA +G+ YI + Y+H
Sbjct: 81 EPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA----EGMAYIE---RKNYIH 133
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRF 459
RD++ +N+L+ + L K+ADFGL ++ E + E A P + PE I F
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARVIE---DNEYTAREGAKFPIKWTAPEAINFGCF-- 188
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELIT 488
T K+DV++FG++L E++T
Sbjct: 189 -----------TIKSDVWSFGILLYEIVT 206
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 91/224 (40%), Gaps = 48/224 (21%)
Query: 300 IGRGGFGNVYFGLLGDR-EAAIKKMR--SNKSKEFFAELKVLCKIHH------------- 343
+G G FG V+ + A+K M+ S + F AE V+ + H
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE 249
Query: 344 -INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
I + GSL D L QPL + A+G+ +I Y+HRD
Sbjct: 250 PIYIITEFMAKGSLLDFLKSDE-GSKQPLP--KLIDFSAQIAEGMAFIEQRN---YIHRD 303
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMH 462
++ +NIL+ L K+ADFGL ++ + K + PE I F
Sbjct: 304 LRAANILVSASLVCKIADFGLARVGAKFPIK------------WTAPEAINFGSF----- 346
Query: 463 SSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSL 506
T K+DV++FG++L E++T R S P +++L
Sbjct: 347 --------TIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 382
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 105/252 (41%), Gaps = 56/252 (22%)
Query: 284 LEEIEEATNNFDESRIIGRGGFGNVY---FGLLGDREAAIKKMRSNKS-----KEFFAEL 335
LE + F + R++GRGGFG V+ G A K + + E
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 336 KVLCKIH---------------HINVFISTFGNGSLSDHLHD-----PLLKGHQPLTWTA 375
K+L K+H + + ++ G + H+++ P + + + +TA
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 376 RTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGL-VKLEERTNEKE 434
+ G+E++H ++RD+K N+LLDD +++D GL V+L+ + +
Sbjct: 297 QI------VSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK 347
Query: 435 MLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALI 494
A GTPG++ PE + + + F + D FA GV L E+I R
Sbjct: 348 GYA----GTPGFMAPELLLGEEYDFSV-------------DYFALGVTLYEMIAA-RGPF 389
Query: 495 RDDSEPTKMKSL 506
R E + K L
Sbjct: 390 RARGEKVENKEL 401
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 49/224 (21%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDRE--AAIKKM------RSNKSKEFFAELKVLCKI 341
A +F+ R +G+G FGNVY + A+K + ++ + E+++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 342 HHINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD-- 392
H N+ L + HD L+ + PL R L D + YI +
Sbjct: 66 RHPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 393 ------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
H+K R +HRDIK N+LL K+ADFG + T L GT Y
Sbjct: 119 NALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTDLCGTLDY 172
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
LPPE I + MH K D+++ GV+ E + GK
Sbjct: 173 LPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 203
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 40/208 (19%)
Query: 300 IGRGGFGNVYFGLLGDREAAI---KKMRSNKSKE----FFAELKVLCKIHHINV------ 346
+G G FG VY ++E ++ K+ KS+E + E+ +L H N+
Sbjct: 45 LGDGAFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 347 --------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARY 398
+ F G D + +L+ +PLT + + + Y+HD+ +
Sbjct: 103 FYYENNLWILIEFCAGGAVDAV---MLELERPLTESQIQVVCKQTLDALNYLHDN---KI 156
Query: 399 VHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFR 458
+HRD+K NIL K+ADFG+ RT ++ +GTP ++ PE +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRR---DSFIGTPYWMAPEVV------ 207
Query: 459 FDMHSSVMELQVTTKTDVFAFGVVLAEL 486
M + + K DV++ G+ L E+
Sbjct: 208 --MCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 95/219 (43%), Gaps = 45/219 (20%)
Query: 299 IIGRGGFGNVYFGLLGDREAAIK--KMRSNKSKEFFAELKVLCKIHHINVF--------- 347
+ RG FG V+ L + A+K ++ +S + E+ L + H N+
Sbjct: 31 VKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRG 90
Query: 348 ---------ISTFG-NGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH------ 391
I+ F GSLSD L ++ +W IA A+G+ Y+H
Sbjct: 91 TSVDVDLWLITAFHEKGSLSDFLKANVV------SWNELCHIAETMARGLAYLHEDIPGL 144
Query: 392 -DHTKARYVHRDIKTSNILLDDGLRAKVADFGL-VKLEERTNEKEMLATRLVGTPGYLPP 449
D K HRDIK+ N+LL + L A +ADFGL +K E + + VGT Y+ P
Sbjct: 145 KDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQ--VGTRRYMAP 202
Query: 450 EYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
E + F + + + D++A G+VL EL +
Sbjct: 203 E-VLEGAINFQRDAFL-------RIDMYAMGLVLWELAS 233
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 49/224 (21%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDRE--AAIKKM------RSNKSKEFFAELKVLCKI 341
A +F+ R +G+G FGNVY + A+K + ++ + E+++ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 342 HHINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD-- 392
H N+ L + HD L+ + PL R L D + YI +
Sbjct: 67 RHPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 119
Query: 393 ------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
H+K R +HRDIK N+LL K+ADFG + T L GT Y
Sbjct: 120 NALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTDLCGTLDY 173
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
LPPE I + MH K D+++ GV+ E + GK
Sbjct: 174 LPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 204
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 88/214 (41%), Gaps = 39/214 (18%)
Query: 298 RIIGRGGFGNV---YFGLLGD---REAAIKKMRSNKSKEFFAELK----VLCKIHHINVF 347
R +G G FG V + GD + A+K ++ A+LK +L ++H N+
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 348 ------ISTFGNGSL-------SDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHT 394
GNG S L + L K + + + A+ KG++Y+
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR- 145
Query: 395 KARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFV 454
+YVHRD+ N+L++ + K+ DFGL K E E + + PE +
Sbjct: 146 --QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQ 203
Query: 455 KRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+F +DV++FGV L EL+T
Sbjct: 204 SKFYI-------------ASDVWSFGVTLHELLT 224
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 105/252 (41%), Gaps = 56/252 (22%)
Query: 284 LEEIEEATNNFDESRIIGRGGFGNVY---FGLLGDREAAIKKMRSNKS-----KEFFAEL 335
LE + F + R++GRGGFG V+ G A K + + E
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 336 KVLCKIH---------------HINVFISTFGNGSLSDHLHD-----PLLKGHQPLTWTA 375
K+L K+H + + ++ G + H+++ P + + + +TA
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 376 RTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGL-VKLEERTNEKE 434
+ G+E++H ++RD+K N+LLDD +++D GL V+L+ + +
Sbjct: 297 QI------VSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK 347
Query: 435 MLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALI 494
A GTPG++ PE + + + F + D FA GV L E+I R
Sbjct: 348 GYA----GTPGFMAPELLLGEEYDFSV-------------DYFALGVTLYEMIAA-RGPF 389
Query: 495 RDDSEPTKMKSL 506
R E + K L
Sbjct: 390 RARGEKVENKEL 401
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 105/252 (41%), Gaps = 56/252 (22%)
Query: 284 LEEIEEATNNFDESRIIGRGGFGNVY---FGLLGDREAAIKKMRSNKS-----KEFFAEL 335
LE + F + R++GRGGFG V+ G A K + + E
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 336 KVLCKIH---------------HINVFISTFGNGSLSDHLHD-----PLLKGHQPLTWTA 375
K+L K+H + + ++ G + H+++ P + + + +TA
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 376 RTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGL-VKLEERTNEKE 434
+ G+E++H ++RD+K N+LLDD +++D GL V+L+ + +
Sbjct: 297 QI------VSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK 347
Query: 435 MLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALI 494
A GTPG++ PE + + + F + D FA GV L E+I R
Sbjct: 348 GYA----GTPGFMAPELLLGEEYDFSV-------------DYFALGVTLYEMIAA-RGPF 389
Query: 495 RDDSEPTKMKSL 506
R E + K L
Sbjct: 390 RARGEKVENKEL 401
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 96/226 (42%), Gaps = 53/226 (23%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDREA----AIKKM------RSNKSKEFFAELKVLC 339
A +F+ R +G+G FGNVY L ++++ A+K + ++ + E+++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 340 KIHHINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD 392
+ H N+ L + HD L+ + PL R L D + YI +
Sbjct: 64 HLRHPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 393 --------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
H+K R +HRDIK N+LL K+ADFG + T L GT
Sbjct: 117 LANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTXLCGTL 170
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
YLPPE I + MH K D+++ GV+ E + GK
Sbjct: 171 DYLPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 203
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 96/226 (42%), Gaps = 53/226 (23%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDREA----AIKKM------RSNKSKEFFAELKVLC 339
A +F+ R +G+G FGNVY L ++++ A+K + ++ + E+++
Sbjct: 10 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 67
Query: 340 KIHHINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD 392
+ H N+ L + HD L+ + PL R L D + YI +
Sbjct: 68 HLRHPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 120
Query: 393 --------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
H+K R +HRDIK N+LL K+ADFG + T L GT
Sbjct: 121 LANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTL 174
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
YLPPE I + MH K D+++ GV+ E + GK
Sbjct: 175 DYLPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 207
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 52/105 (49%), Gaps = 19/105 (18%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
IEY H H + VHRD+K N+LLDD L K+ADFGL + N L T G+P
Sbjct: 120 AIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN---FLKTS-CGSPN 172
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y PE I K L + DV++ G+VL ++ G+
Sbjct: 173 YAAPEVINGK------------LYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 117/278 (42%), Gaps = 58/278 (20%)
Query: 300 IGRGGFGNVYFGLLGDR-EAAIKKMRSN--KSKEFFAELKVLCKIHH------------- 343
+G G FG V+ G + + A+K ++ + F E ++ + H
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE 79
Query: 344 --INVFISTFGNGSLSDHLH-DPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
I + GSL D L D K P QIA +G+ YI + Y+H
Sbjct: 80 EPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA----EGMAYIE---RKNYIH 132
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRF 459
RD++ +N+L+ + L K+ADFGL ++ E + E A P + PE I F
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVIE---DNEYTAREGAKFPIKWTAPEAINFGCF-- 187
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELIT-GK------------RALIRDDSEPTKMKSL 506
T K++V++FG++L E++T GK AL + P +M++
Sbjct: 188 -----------TIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMP-RMENC 235
Query: 507 ITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITSTE 544
+ + + C E A +RP + ++L T+TE
Sbjct: 236 PDELYDIMKMCWKEKAEERPTFDYLQSVLDDF-YTATE 272
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 96/226 (42%), Gaps = 53/226 (23%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDREA----AIKKM------RSNKSKEFFAELKVLC 339
A +F+ R +G+G FGNVY L ++++ A+K + ++ + E+++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 340 KIHHINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD 392
+ H N+ L + HD L+ + PL R L D + YI +
Sbjct: 67 HLRHPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 393 --------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
H+K R +HRDIK N+LL K+ADFG + T L GT
Sbjct: 120 LANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTL 173
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
YLPPE I + MH K D+++ GV+ E + GK
Sbjct: 174 DYLPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 206
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 49/224 (21%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDRE--AAIKKM------RSNKSKEFFAELKVLCKI 341
A +F+ R +G+G FGNVY + A+K + ++ + E+++ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 342 HHINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD-- 392
H N+ L + HD L+ + PL R L D + YI +
Sbjct: 71 RHPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 123
Query: 393 ------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
H+K R +HRDIK N+LL K+ADFG + T L GT Y
Sbjct: 124 NALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTDLCGTLDY 177
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
LPPE I + MH K D+++ GV+ E + GK
Sbjct: 178 LPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 208
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 96/226 (42%), Gaps = 53/226 (23%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDREA----AIKKM------RSNKSKEFFAELKVLC 339
A +F+ R +G+G FGNVY L ++++ A+K + ++ + E+++
Sbjct: 5 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 340 KIHHINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD 392
+ H N+ L + HD L+ + PL R L D + YI +
Sbjct: 63 HLRHPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 115
Query: 393 --------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
H+K R +HRDIK N+LL K+ADFG + T L GT
Sbjct: 116 LANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTL 169
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
YLPPE I + MH K D+++ GV+ E + GK
Sbjct: 170 DYLPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 202
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 113/272 (41%), Gaps = 58/272 (21%)
Query: 300 IGRGGFGNVYFGL-LGDREAAIKKMRSNKSKE--FFAELKVLCKIHH------------- 343
IG G FG V+ G L + AIK +R E F E +V+ K+ H
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 344 --INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIA--LDAAKGIEYIHDHTKARYV 399
I + +G LSD+L Q + A T + LD +G+ Y+ + A +
Sbjct: 75 APICLVFEFMEHGCLSDYLRT------QRGLFAAETLLGMCLDVCEGMAYLEE---ACVI 125
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG-YLPPEYIFVKRFR 458
HRD+ N L+ + KV+DFG+ + +L + + G P ++ + F
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRF--------VLDDQYTSSTGTKFPVKWASPEVFS 177
Query: 459 FDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALI--RDDSEPT----------KMKSL 506
F +SS K+DV++FGV++ E+ + + R +SE K +
Sbjct: 178 FSRYSS--------KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA 229
Query: 507 ITIMAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
T + + C E DRP ++ L++I
Sbjct: 230 STHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 261
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 105/252 (41%), Gaps = 56/252 (22%)
Query: 284 LEEIEEATNNFDESRIIGRGGFGNVY---FGLLGDREAAIKKMRSNKS-----KEFFAEL 335
LE + F + R++GRGGFG V+ G A K + + E
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 336 KVLCKIH---------------HINVFISTFGNGSLSDHLHD-----PLLKGHQPLTWTA 375
K+L K+H + + ++ G + H+++ P + + + +TA
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 376 RTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGL-VKLEERTNEKE 434
+ G+E++H ++RD+K N+LLDD +++D GL V+L+ + +
Sbjct: 297 QI------VSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK 347
Query: 435 MLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALI 494
A GTPG++ PE + + + F + D FA GV L E+I R
Sbjct: 348 GYA----GTPGFMAPELLLGEEYDFSV-------------DYFALGVTLYEMIAA-RGPF 389
Query: 495 RDDSEPTKMKSL 506
R E + K L
Sbjct: 390 RARGEKVENKEL 401
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 108/248 (43%), Gaps = 49/248 (19%)
Query: 270 DVTVLESERTIIFSLEEIEEATNNFDESRIIGRGGFGNVYFGL--LGDREAAIKKM---- 323
D +LE R+I+ S+ + ++ F++ IG+G G VY + +E AI++M
Sbjct: 2 DEEILEKLRSIV-SVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQ 57
Query: 324 --------------RSNKSKEFFAELKVLCKIHHINVFISTFGNGSLSDHLHDPLLKGHQ 369
R NK+ L + V + GSL+D + + + Q
Sbjct: 58 QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ 117
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
+ + + +E++H + + +HRDIK+ NILL K+ DFG +
Sbjct: 118 ------IAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA--QI 166
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
T E+ +T +VGTP ++ PE + K + K D+++ G++ E+I G
Sbjct: 167 TPEQSKRST-MVGTPYWMAPEVVTRKAY-------------GPKVDIWSLGIMAIEMIEG 212
Query: 490 KRALIRDD 497
+ + ++
Sbjct: 213 EPPYLNEN 220
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 49/224 (21%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDRE--AAIKKM------RSNKSKEFFAELKVLCKI 341
A +F+ R +G+G FGNVY + A+K + ++ + E+++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 342 HHINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD-- 392
H N+ L + HD L+ + PL R L D + YI +
Sbjct: 66 RHPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 393 ------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
H+K R +HRDIK N+LL K+ADFG + T L GT Y
Sbjct: 119 NALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTDLCGTLDY 172
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
LPPE I + MH K D+++ GV+ E + GK
Sbjct: 173 LPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 203
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 89/214 (41%), Gaps = 39/214 (18%)
Query: 298 RIIGRGGFGNV---YFGLLGD---REAAIKKMRSNKSKEFFAELK----VLCKIHHINVF 347
R +G G FG V + GD + A+K ++ A+LK +L ++H N+
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 74
Query: 348 ------ISTFGNGSL-------SDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHT 394
GNG S L + L K + + + A+ KG++Y+
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL---G 131
Query: 395 KARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFV 454
+YVHRD+ N+L++ + K+ DFGL K E E + + PE
Sbjct: 132 SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPE---- 187
Query: 455 KRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+M+ + +DV++FGV L EL+T
Sbjct: 188 ---------CLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 121/291 (41%), Gaps = 68/291 (23%)
Query: 283 SLEEIE-----EATNNFDESRIIGRGGFGNVYFG--LLGDREAAIKKMR--SNKSKEFFA 333
SL+EI+ + F+ ++G G +G VY G + + AAIK M ++ +E
Sbjct: 10 SLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQ 69
Query: 334 ELKVLCKI-HHINV--FISTF-------------------GNGSLSDHLHDPLLKGHQPL 371
E+ +L K HH N+ + F G GS++D L+K +
Sbjct: 70 EINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTD-----LIKNTKGN 124
Query: 372 T----WTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLE 427
T W A I + +G+ ++H H + +HRDIK N+LL + K+ DFG+
Sbjct: 125 TLKEEWIA--YICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 179
Query: 428 ERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELI 487
+RT + +GTP ++ PE I + K+D+++ G+ E+
Sbjct: 180 DRTVGRR---NTFIGTPYWMAPEVIAC--------DENPDATYDFKSDLWSLGITAIEMA 228
Query: 488 TGK---------RALI---RDDSEPTKMKSLITIMAAVAEWCLNEDAVDRP 526
G RAL R+ + K K + E CL ++ RP
Sbjct: 229 EGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRP 279
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 113/272 (41%), Gaps = 58/272 (21%)
Query: 300 IGRGGFGNVYFGL-LGDREAAIKKMRSNKSKE--FFAELKVLCKIHH------------- 343
IG G FG V+ G L + AIK +R E F E +V+ K+ H
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 72
Query: 344 --INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIA--LDAAKGIEYIHDHTKARYV 399
I + +G LSD+L Q + A T + LD +G+ Y+ + A +
Sbjct: 73 APICLVFEFMEHGCLSDYLRT------QRGLFAAETLLGMCLDVCEGMAYLEE---ACVI 123
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG-YLPPEYIFVKRFR 458
HRD+ N L+ + KV+DFG+ + +L + + G P ++ + F
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRF--------VLDDQYTSSTGTKFPVKWASPEVFS 175
Query: 459 FDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALI--RDDSEPT----------KMKSL 506
F +SS K+DV++FGV++ E+ + + R +SE K +
Sbjct: 176 FSRYSS--------KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA 227
Query: 507 ITIMAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
T + + C E DRP ++ L++I
Sbjct: 228 STHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 259
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNVYFGL---LGDREAAIKKMRSNK 327
+ ER + E I E + +G G +G+V G R A K R +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 328 S----KEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
S K + EL++L + H NV + F + +D L H Q
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----R 173
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 490 K 490
+
Sbjct: 220 R 220
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 102/242 (42%), Gaps = 54/242 (22%)
Query: 281 IFSLEEIEEATNNFDESRIIGRGGFGNVYFGLLG-------DREAAIKKMRSNKSK---- 329
++ +E E A SR +G+G FG VY G+ + AIK + S
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 330 EFFAELKVLCKI--HHIN-------------VFISTFGNGSLSDHL--------HDPLLK 366
EF E V+ + HH+ V + G L +L ++P+L
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 367 GHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKL 426
P + + Q+A + A G+ Y++ + ++VHRD+ N ++ + K+ DFG+ +
Sbjct: 128 ---PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 181
Query: 427 EERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
T+ G G LP R+ S+ + TT +DV++FGVVL E+
Sbjct: 182 IXETDXXRK------GGKGLLP--------VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
Query: 487 IT 488
T
Sbjct: 228 AT 229
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 94/222 (42%), Gaps = 53/222 (23%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDREA----AIKKM------RSNKSKEFFAELKVLCKIH 342
+FD R +G+G FGNVY L +R++ A+K + ++ + E+++ +
Sbjct: 13 DFDIGRPLGKGKFGNVY--LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 343 HINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD--- 392
H N+ L + HD L+ + PL R L D + YI +
Sbjct: 71 HPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELAN 123
Query: 393 -----HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYL 447
H+K R +HRDIK N+LL K+ADFG + T L GT YL
Sbjct: 124 ALSYCHSK-RVIHRDIKPENLLLGSNGELKIADFGWS-----VHAPSSRRTTLCGTLDYL 177
Query: 448 PPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
PPE I + MH K D+++ GV+ E + G
Sbjct: 178 PPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVG 206
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 102/242 (42%), Gaps = 54/242 (22%)
Query: 281 IFSLEEIEEATNNFDESRIIGRGGFGNVYFGLLG-------DREAAIKKMRSNKSK---- 329
+F +E E A SR +G+G FG VY G+ + AIK + S
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 330 EFFAELKVLCKI--HHIN-------------VFISTFGNGSLSDHL--------HDPLLK 366
EF E V+ + HH+ V + G L +L ++P+L
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 367 GHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKL 426
P + + Q+A + A G+ Y++ + ++VHRD+ N ++ + K+ DFG+ +
Sbjct: 125 ---PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 178
Query: 427 EERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
T+ G G LP R+ S+ + TT +DV++FGVVL E+
Sbjct: 179 IYETDYYRK------GGKGLLP--------VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
Query: 487 IT 488
T
Sbjct: 225 AT 226
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 99/234 (42%), Gaps = 50/234 (21%)
Query: 291 TNNFDESRIIGRGGFGNVYFG--LLGDREAAIKKMRSNKSKE------FFAELKVLCKIH 342
++ ++ I+G GG V+ L R+ A+K +R++ +++ F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 343 HINVFISTFGNG--------------------SLSDHLHDPLLKGHQPLTWTARTQIALD 382
H + ++ + G +L D +H P+T ++ D
Sbjct: 71 HPAI-VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIAD 124
Query: 383 AAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVG 442
A + + + H + +HRD+K +NIL+ KV DFG+ + + ++G
Sbjct: 125 ACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIG 181
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
T YL PE + R D V ++DV++ G VL E++TG+ D
Sbjct: 182 TAQYLSPE-----QARGD--------SVDARSDVYSLGCVLYEVLTGEPPFTGD 222
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 88/212 (41%), Gaps = 42/212 (19%)
Query: 300 IGRGGFGNVYFGLLGDREA--AIKKMRSNKSKEFFA-----ELKVLCKIHHINV--FIST 350
+G G +G V + G A AIKK+ E FA EL++L + H NV +
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 351 FGNGSLSDHLHD-----PL-------LKGHQPLTWTARTQIALDAAKGIEYIHDHTKARY 398
F D D P L H+ L + KG+ YIH A
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH---AAGI 149
Query: 399 VHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFR 458
+HRD+K N+ +++ K+ DFGL R + EM V T Y PE I
Sbjct: 150 IHRDLKPGNLAVNEDCELKILDFGLA----RQADSEMXGX--VVTRWYRAPEVI------ 197
Query: 459 FDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
+ ++ T D+++ G ++AE+ITGK
Sbjct: 198 ------LNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 119/280 (42%), Gaps = 72/280 (25%)
Query: 300 IGRGGFGNVYFG-LLGDREAAIKKMR--SNKSKEFFAELKVLCKIHH------------- 343
+G G FG V +G G + AIK ++ S EF E KV+ + H
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 75
Query: 344 --INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHR 401
I + NG L ++L + H+ T ++ D + +EY+ +++HR
Sbjct: 76 RPIFIITEYMANGCLLNYLRE---MRHRFQT-QQLLEMCKDVCEAMEYLES---KQFLHR 128
Query: 402 DIKTSNILLDDGLRAKVADFGLVKL---EERTNEKEMLATRLVGTP---GYLPPEYIFVK 455
D+ N L++D KV+DFGL + +E T+ VG+ + PPE +
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS--------VGSKFPVRWSPPEVLMYS 180
Query: 456 RFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRALIRDDSEPT------------- 501
+F ++K+D++AFGV++ E+ + GK R + T
Sbjct: 181 KF-------------SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP 227
Query: 502 --KMKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIM 539
+ + TIM + C +E A +RP + +++ + +M
Sbjct: 228 HLASEKVYTIMYS----CWHEKADERPTFKILLSNILDVM 263
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 113/272 (41%), Gaps = 58/272 (21%)
Query: 300 IGRGGFGNVYFGL-LGDREAAIKKMRSNKSKE--FFAELKVLCKIHH------------- 343
IG G FG V+ G L + AIK +R E F E +V+ K+ H
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 77
Query: 344 --INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIA--LDAAKGIEYIHDHTKARYV 399
I + +G LSD+L Q + A T + LD +G+ Y+ + A +
Sbjct: 78 APICLVFEFMEHGCLSDYLRT------QRGLFAAETLLGMCLDVCEGMAYLEE---ACVI 128
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG-YLPPEYIFVKRFR 458
HRD+ N L+ + KV+DFG+ + +L + + G P ++ + F
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRF--------VLDDQYTSSTGTKFPVKWASPEVFS 180
Query: 459 FDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALI--RDDSEPT----------KMKSL 506
F +SS K+DV++FGV++ E+ + + R +SE K +
Sbjct: 181 FSRYSS--------KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA 232
Query: 507 ITIMAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
T + + C E DRP ++ L++I
Sbjct: 233 STHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 264
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 96/226 (42%), Gaps = 53/226 (23%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDREA----AIKKM------RSNKSKEFFAELKVLC 339
A +F+ R +G+G FGNVY L ++++ A+K + ++ + E+++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 340 KIHHINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD 392
+ H N+ L + HD L+ + PL R L D + YI +
Sbjct: 65 HLRHPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 393 --------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
H+K R +HRDIK N+LL K+ADFG + T L GT
Sbjct: 118 LANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWS-----CHAPSSRRTTLSGTL 171
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
YLPPE I + MH K D+++ GV+ E + GK
Sbjct: 172 DYLPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 204
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNVYFGL---LGDREAAIKKMRSNK 327
+ ER + E I E + +G G +G+V G R A K R +
Sbjct: 20 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 79
Query: 328 S----KEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
S K + EL++L + H NV + F + +D L H Q
Sbjct: 80 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 139
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 140 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----R 192
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 193 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 238
Query: 490 K 490
+
Sbjct: 239 R 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 98/241 (40%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV---YFGLLGDREAAIKKMRSNK 327
+ ER + E I E + +G G +G+V + G R A K R +
Sbjct: 21 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 80
Query: 328 S----KEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
S K + EL++L + H NV + F + +D L H Q
Sbjct: 81 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 140
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----R 193
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 194 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 239
Query: 490 K 490
+
Sbjct: 240 R 240
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 115/273 (42%), Gaps = 60/273 (21%)
Query: 300 IGRGGFGNVYFGL-LGDREAAIKKMRSNKSKE--FFAELKVLCKIHHINVFISTFG---- 352
IG G FG V+ G L + AIK +R E F E +V+ K+ H + + +G
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKL-VQLYGVCLE 74
Query: 353 ------------NGSLSDHLHDPLLKGHQPLTWTARTQIA--LDAAKGIEYIHDHTKARY 398
+G LSD+L Q + A T + LD +G+ Y+ + A
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRT------QRGLFAAETLLGMCLDVCEGMAYLEE---ACV 125
Query: 399 VHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG-YLPPEYIFVKRF 457
+HRD+ N L+ + KV+DFG+ + +L + + G P ++ + F
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRF--------VLDDQYTSSTGTKFPVKWASPEVF 177
Query: 458 RFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALI--RDDSEPT----------KMKS 505
F +SS K+DV++FGV++ E+ + + R +SE K +
Sbjct: 178 SFSRYSS--------KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRL 229
Query: 506 LITIMAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
T + + C E DRP ++ L++I
Sbjct: 230 ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 54/238 (22%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYFGLLG-------DREAAIKKMRSNKSK----EFFA 333
+E E A SR +G+G FG VY G+ + AIK + S EF
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 334 ELKVLCKI--HHIN-------------VFISTFGNGSLSDHL--------HDPLLKGHQP 370
E V+ + HH+ V + G L +L ++P+L P
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA---P 119
Query: 371 LTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERT 430
+ + Q+A + A G+ Y++ + ++VHRD+ N ++ + K+ DFG+ + T
Sbjct: 120 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET 176
Query: 431 NEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ G G LP R+ S+ + TT +DV++FGVVL E+ T
Sbjct: 177 DXXRK------GGKGLLP--------VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 115/274 (41%), Gaps = 60/274 (21%)
Query: 300 IGRGGFGNVYFG-LLGDREAAIKKMR--SNKSKEFFAELKVLCKIHH------------- 343
+G G FG V +G G + AIK ++ S EF E KV+ + H
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91
Query: 344 --INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHR 401
I + NG L ++L + H+ T ++ D + +EY+ +++HR
Sbjct: 92 RPIFIITEYMANGCLLNYLRE---MRHRFQT-QQLLEMCKDVCEAMEYLES---KQFLHR 144
Query: 402 DIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDM 461
D+ N L++D KV+DFGL + + ++ + PPE + +F
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF--PVRWSPPEVLMYSKF---- 198
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELIT-GKRALIRDDSEPT---------------KMKS 505
++K+D++AFGV++ E+ + GK R + T +
Sbjct: 199 ---------SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEK 249
Query: 506 LITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIM 539
+ TIM + C +E A +RP + +++ + +M
Sbjct: 250 VYTIMYS----CWHEKADERPTFKILLSNILDVM 279
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 112/272 (41%), Gaps = 58/272 (21%)
Query: 300 IGRGGFGNVYFGL-LGDREAAIKKMRSNKSKE--FFAELKVLCKIHH------------- 343
IG G FG V+ G L + AIK +R E F E +V+ K+ H
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 344 --INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIA--LDAAKGIEYIHDHTKARYV 399
I + +G LSD+L Q + A T + LD +G+ Y+ + A +
Sbjct: 75 APICLVFEFMEHGCLSDYLRT------QRGLFAAETLLGMCLDVCEGMAYLEE---ASVI 125
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG-YLPPEYIFVKRFR 458
HRD+ N L+ + KV+DFG+ + +L + + G P ++ + F
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRF--------VLDDQYTSSTGTKFPVKWASPEVFS 177
Query: 459 FDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALI--RDDSEPT----------KMKSL 506
F +SS K+DV++FGV++ E+ + + R +SE K +
Sbjct: 178 FSRYSS--------KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA 229
Query: 507 ITIMAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
T + + C E DRP ++ L+ I
Sbjct: 230 STHVYQIMNHCWKERPEDRPAFSRLLRQLAAI 261
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 119/280 (42%), Gaps = 72/280 (25%)
Query: 300 IGRGGFGNVYFG-LLGDREAAIKKMR--SNKSKEFFAELKVLCKIHH------------- 343
+G G FG V +G G + AIK ++ S EF E KV+ + H
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 344 --INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHR 401
I + NG L ++L + H+ T ++ D + +EY+ +++HR
Sbjct: 77 RPIFIITEYMANGCLLNYLRE---MRHRFQT-QQLLEMCKDVCEAMEYLES---KQFLHR 129
Query: 402 DIKTSNILLDDGLRAKVADFGLVKL---EERTNEKEMLATRLVGTP---GYLPPEYIFVK 455
D+ N L++D KV+DFGL + +E T+ VG+ + PPE +
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS--------VGSKFPVRWSPPEVLMYS 181
Query: 456 RFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRALIRDDSEPT------------- 501
+F ++K+D++AFGV++ E+ + GK R + T
Sbjct: 182 KF-------------SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP 228
Query: 502 --KMKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIM 539
+ + TIM + C +E A +RP + +++ + +M
Sbjct: 229 HLASEKVYTIMYS----CWHEKADERPTFKILLSNILDVM 264
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 106/250 (42%), Gaps = 53/250 (21%)
Query: 270 DVTVLESERTIIFSLEEIEEATNNFDESRIIGRGGFGNVYFGL--LGDREAAIKKM---- 323
D +LE R+I+ S+ + ++ F++ IG+G G VY + +E AI++M
Sbjct: 2 DEEILEKLRSIV-SVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQ 57
Query: 324 --------------RSNKSKEFFAELKVLCKIHHINVFISTFGNGSLSDHLHDPLLKGHQ 369
R NK+ L + V + GSL+D + + + Q
Sbjct: 58 QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ 117
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK--LE 427
+ + + +E++H + + +HRDIK+ NILL K+ DFG
Sbjct: 118 ------IAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168
Query: 428 ERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELI 487
E++ EM VGTP ++ PE + K + K D+++ G++ E+I
Sbjct: 169 EQSKRSEM-----VGTPYWMAPEVVTRKAY-------------GPKVDIWSLGIMAIEMI 210
Query: 488 TGKRALIRDD 497
G+ + ++
Sbjct: 211 EGEPPYLNEN 220
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 92/225 (40%), Gaps = 42/225 (18%)
Query: 287 IEEATNNFDESRIIGRGGFGNVYFGL---LGDREAAIKKMRSNKS----KEFFAELKVLC 339
I E + +G G +G+V G R A K R +S K + EL++L
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 340 KIHHINV--FISTFGNGSLSDHLHDPLLKGH------------QPLTWTARTQIALDAAK 385
+ H NV + F + +D L H Q LT + +
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 132
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G++YIH A +HRD+K SN+ +++ K+ DFGL R + EM T V T
Sbjct: 133 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEM--TGYVATRW 183
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y PE + + + D+++ G ++AEL+TG+
Sbjct: 184 YRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 106/248 (42%), Gaps = 49/248 (19%)
Query: 270 DVTVLESERTIIFSLEEIEEATNNFDESRIIGRGGFGNVYFGL--LGDREAAIKKM---- 323
D +LE R+I+ S+ + ++ F++ IG+G G VY + +E AI++M
Sbjct: 3 DEEILEKLRSIV-SVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQ 58
Query: 324 --------------RSNKSKEFFAELKVLCKIHHINVFISTFGNGSLSDHLHDPLLKGHQ 369
R NK+ L + V + GSL+D + + + Q
Sbjct: 59 QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ 118
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
+ + + +E++H + + +HRDIK+ NILL K+ DFG +
Sbjct: 119 ------IAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA---Q 166
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
++ + +VGTP ++ PE + K + K D+++ G++ E+I G
Sbjct: 167 ITPEQSKRSXMVGTPYWMAPEVVTRKAY-------------GPKVDIWSLGIMAIEMIEG 213
Query: 490 KRALIRDD 497
+ + ++
Sbjct: 214 EPPYLNEN 221
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 92/225 (40%), Gaps = 42/225 (18%)
Query: 287 IEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-----KSKEFFAELKVLC 339
I E + IG G +G+V F A+KK+ +K + EL++L
Sbjct: 22 IWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 340 KIHHINV--FISTFGNGSLSDHLHDPLLKGH------------QPLTWTARTQIALDAAK 385
+ H NV + F + +D L H Q LT + +
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 141
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G++YIH A +HRD+K SN+ +++ K+ DFGL R + EM T V T
Sbjct: 142 GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA----RHTDDEM--TGYVATRW 192
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y PE + + + D+++ G ++AEL+TG+
Sbjct: 193 YRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-- 326
+ ER + E I E + +G G +G+V F A+KK+
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 327 ---KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
+K + EL++L + H NV + F + +D L H Q
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----R 173
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIM------------LNAMHYNQTVDIWSVGCIMAELLTG 219
Query: 490 K 490
+
Sbjct: 220 R 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 42/225 (18%)
Query: 287 IEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-----KSKEFFAELKVLC 339
I E + +G G +G+V F A+KK+ +K + EL++L
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 82
Query: 340 KIHHINV--FISTFGNGSLSDHLHDPLLKGH------------QPLTWTARTQIALDAAK 385
+ H NV + F + +D L H Q LT + +
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 142
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G++YIH A +HRD+K SN+ +++ K+ DFGL R + EM T V T
Sbjct: 143 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEM--TGYVATRW 193
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y PE + + + D+++ G ++AEL+TG+
Sbjct: 194 YRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 119/280 (42%), Gaps = 72/280 (25%)
Query: 300 IGRGGFGNVYFG-LLGDREAAIKKMR--SNKSKEFFAELKVLCKIHH------------- 343
+G G FG V +G G + AIK ++ S EF E KV+ + H
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 71
Query: 344 --INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHR 401
I + NG L ++L + H+ T ++ D + +EY+ +++HR
Sbjct: 72 RPIFIITEYMANGCLLNYLRE---MRHRFQT-QQLLEMCKDVCEAMEYLES---KQFLHR 124
Query: 402 DIKTSNILLDDGLRAKVADFGLVKL---EERTNEKEMLATRLVGTP---GYLPPEYIFVK 455
D+ N L++D KV+DFGL + +E T+ VG+ + PPE +
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS--------VGSKFPVRWSPPEVLMYS 176
Query: 456 RFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRALIRDDSEPT------------- 501
+F ++K+D++AFGV++ E+ + GK R + T
Sbjct: 177 KF-------------SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP 223
Query: 502 --KMKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIM 539
+ + TIM + C +E A +RP + +++ + +M
Sbjct: 224 HLASEKVYTIMYS----CWHEKADERPTFKILLSNILDVM 259
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 102/242 (42%), Gaps = 54/242 (22%)
Query: 281 IFSLEEIEEATNNFDESRIIGRGGFGNVYFGLLG-------DREAAIKKMRSNKSK---- 329
++ +E E A SR +G+G FG VY G+ + AIK + S
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 330 EFFAELKVLCKI--HHIN-------------VFISTFGNGSLSDHL--------HDPLLK 366
EF E V+ + HH+ V + G L +L ++P+L
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 367 GHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKL 426
P + + Q+A + A G+ Y++ + ++VHRD+ N ++ + K+ DFG+ +
Sbjct: 134 ---PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 187
Query: 427 EERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
T+ G G LP R+ S+ + TT +DV++FGVVL E+
Sbjct: 188 IYETDYYRK------GGKGLLP--------VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
Query: 487 IT 488
T
Sbjct: 234 AT 235
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 42/212 (19%)
Query: 300 IGRGGFGNVYFGL---LGDREAAIKKMRSNKS----KEFFAELKVLCKIHHINV--FIST 350
+G G +G+V G R A K R +S K + EL++L + H NV +
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 351 FGNGSLSDHLHDPLLKGH------------QPLTWTARTQIALDAAKGIEYIHDHTKARY 398
F + +D L H Q LT + +G++YIH A
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 156
Query: 399 VHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFR 458
+HRD+K SN+ +++ K+ DFGL R + EM T V T Y PE +
Sbjct: 157 IHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEM--TGYVATRWYRAPEIM------ 204
Query: 459 FDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
+ + D+++ G ++AEL+TG+
Sbjct: 205 ------LNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 102/242 (42%), Gaps = 54/242 (22%)
Query: 281 IFSLEEIEEATNNFDESRIIGRGGFGNVYFGLLG-------DREAAIKKMRSNKSK---- 329
++ +E E A SR +G+G FG VY G+ + AIK + S
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 330 EFFAELKVLCKI--HHIN-------------VFISTFGNGSLSDHL--------HDPLLK 366
EF E V+ + HH+ V + G L +L ++P+L
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 367 GHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKL 426
P + + Q+A + A G+ Y++ + ++VHRD+ N ++ + K+ DFG+ +
Sbjct: 127 ---PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 180
Query: 427 EERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
T+ G G LP R+ S+ + TT +DV++FGVVL E+
Sbjct: 181 IYETDYYRK------GGKGLLP--------VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
Query: 487 IT 488
T
Sbjct: 227 AT 228
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 106/248 (42%), Gaps = 49/248 (19%)
Query: 270 DVTVLESERTIIFSLEEIEEATNNFDESRIIGRGGFGNVYFGL--LGDREAAIKKM---- 323
D +LE R+I+ S+ + ++ F++ IG+G G VY + +E AI++M
Sbjct: 2 DEEILEKLRSIV-SVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQ 57
Query: 324 --------------RSNKSKEFFAELKVLCKIHHINVFISTFGNGSLSDHLHDPLLKGHQ 369
R NK+ L + V + GSL+D + + + Q
Sbjct: 58 QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ 117
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
+ + + +E++H + + +HRDIK+ NILL K+ DFG +
Sbjct: 118 ------IAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA---Q 165
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
++ + +VGTP ++ PE + K + K D+++ G++ E+I G
Sbjct: 166 ITPEQSKRSXMVGTPYWMAPEVVTRKAY-------------GPKVDIWSLGIMAIEMIEG 212
Query: 490 KRALIRDD 497
+ + ++
Sbjct: 213 EPPYLNEN 220
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 115/274 (41%), Gaps = 60/274 (21%)
Query: 300 IGRGGFGNVYFG-LLGDREAAIKKMR--SNKSKEFFAELKVLCKIHH------------- 343
+G G FG V +G G + AIK ++ S EF E KV+ + H
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 82
Query: 344 --INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHR 401
I + NG L ++L + H+ T ++ D + +EY+ +++HR
Sbjct: 83 RPIFIITEYMANGCLLNYLRE---MRHRFQT-QQLLEMCKDVCEAMEYLES---KQFLHR 135
Query: 402 DIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDM 461
D+ N L++D KV+DFGL + + ++ + PPE + +F
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF--PVRWSPPEVLMYSKF---- 189
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELIT-GKRALIRDDSEPT---------------KMKS 505
++K+D++AFGV++ E+ + GK R + T +
Sbjct: 190 ---------SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEK 240
Query: 506 LITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIM 539
+ TIM + C +E A +RP + +++ + +M
Sbjct: 241 VYTIMYS----CWHEKADERPTFKILLSNILDVM 270
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 34/210 (16%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKMRSNKSKEF----FAELKVLCKIHHINVF-ISTFG 352
IG G +G V + + AIKK+ + + + E+K+L + H N+ I+
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 353 NGSLSDHLHDPLLKGH------------QPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
+ + D L H Q L+ +G++YIH A +H
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 167
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFD 460
RD+K SN+LL+ K+ DFGL ++ + ++ T V T Y PE + +
Sbjct: 168 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK---- 223
Query: 461 MHSSVMELQVTTKTDVFAFGVVLAELITGK 490
T D+++ G +LAE+++ +
Sbjct: 224 --------GYTKSIDIWSVGCILAEMLSNR 245
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 33/176 (18%)
Query: 329 KEFFAELKVLCKIHHINVF-ISTFGNGSLSDHLH--------DPLLK--GHQPLTWTART 377
++ + E+ +L K+ H NV + + DHL+ P+++ +PL+
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQAR 140
Query: 378 QIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNE---KE 434
D KGIEY+H + +HRDIK SN+L+ + K+ADFG+ +NE +
Sbjct: 141 FYFQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGV------SNEFKGSD 191
Query: 435 MLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
L + VGTP ++ PE + R F + DV+A GV L + G+
Sbjct: 192 ALLSNTVGTPAFMAPESLSETRKIFSGKA----------LDVWAMGVTLYCFVFGQ 237
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 38/215 (17%)
Query: 300 IGRGGFGNVYFGL--LGDREAAIKKMRS-----NKSKEFFAELKVLCKIHHINV------ 346
IG G +G V L ++ AIKK+ + +K ELK+L H N+
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 347 ---------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKAR 397
F S + L + ++ QPLT +G++Y+H A+
Sbjct: 123 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH---SAQ 179
Query: 398 YVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPGYLPPEYIFVKR 456
+HRD+K SN+L+++ K+ DFG+ + L E + T V T Y PE +
Sbjct: 180 VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM---- 235
Query: 457 FRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKR 491
+H + T D+++ G + E++ ++
Sbjct: 236 --LSLH------EYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 102/242 (42%), Gaps = 54/242 (22%)
Query: 281 IFSLEEIEEATNNFDESRIIGRGGFGNVYFGLLG-------DREAAIKKMRSNKSK---- 329
++ +E E A SR +G+G FG VY G+ + AIK + S
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 63
Query: 330 EFFAELKVLCKI--HHIN-------------VFISTFGNGSLSDHL--------HDPLLK 366
EF E V+ + HH+ V + G L +L ++P+L
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 367 GHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKL 426
P + + Q+A + A G+ Y++ + ++VHRD+ N ++ + K+ DFG+ +
Sbjct: 124 ---PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 177
Query: 427 EERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
T+ G G LP R+ S+ + TT +DV++FGVVL E+
Sbjct: 178 IYETDYYRK------GGKGLLP--------VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
Query: 487 IT 488
T
Sbjct: 224 AT 225
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-- 326
+ ER + E I E + +G G +G+V F A+KK+
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 327 ---KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
+K + EL++L + H NV + F + +D L H Q
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----R 173
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 490 K 490
+
Sbjct: 220 R 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-- 326
+ ER + E I E + +G G +G+V F A+KK+
Sbjct: 13 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQ 72
Query: 327 ---KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
+K + EL++L + H NV + F + +D L H Q
Sbjct: 73 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 132
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----R 185
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 186 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 231
Query: 490 K 490
+
Sbjct: 232 R 232
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 96/241 (39%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNVYFGL---LGDREAAIKKMRSNK 327
+ ER + E I E + +G G +G+V G R A K R +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 328 S----KEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
S K + EL++L + H NV + F + +D L H Q
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----R 173
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 174 HTDDEMAG--FVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 490 K 490
+
Sbjct: 220 R 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-- 326
+ ER + E I E + +G G +G+V F A+KK+
Sbjct: 3 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 62
Query: 327 ---KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
+K + EL++L + H NV + F + +D L H Q
Sbjct: 63 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 122
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----R 175
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 176 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 221
Query: 490 K 490
+
Sbjct: 222 R 222
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-- 326
+ ER + E I E + +G G +G+V F A+KK+
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 327 ---KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
+K + EL++L + H NV + F + +D L H Q
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----R 173
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 490 K 490
+
Sbjct: 220 R 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 96/241 (39%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNVYFGL---LGDREAAIKKMRSNK 327
+ ER + E I E + +G G +G+V G R A K R +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 328 S----KEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
S K + EL++L + H NV + F + +D L H Q
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----R 173
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 174 HTDDEMAG--FVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 490 K 490
+
Sbjct: 220 R 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-- 326
+ ER + E I E + +G G +G+V F A+KK+
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 327 ---KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
+K + EL++L + H NV + F + +D L H Q
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----R 173
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 174 HTDDEM--TGXVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 490 K 490
+
Sbjct: 220 R 220
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 102/242 (42%), Gaps = 54/242 (22%)
Query: 281 IFSLEEIEEATNNFDESRIIGRGGFGNVYFGLLG-------DREAAIKKMRSNKSK---- 329
++ +E E A SR +G+G FG VY G+ + AIK + S
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 330 EFFAELKVLCKI--HHIN-------------VFISTFGNGSLSDHL--------HDPLLK 366
EF E V+ + HH+ V + G L +L ++P+L
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 367 GHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKL 426
P + + Q+A + A G+ Y++ + ++VHRD+ N ++ + K+ DFG+ +
Sbjct: 134 ---PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 187
Query: 427 EERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
T+ G G LP R+ S+ + TT +DV++FGVVL E+
Sbjct: 188 IYETDYYRK------GGKGLLP--------VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
Query: 487 IT 488
T
Sbjct: 234 AT 235
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-- 326
+ ER + E I E + +G G +G+V F A+KK+
Sbjct: 7 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 66
Query: 327 ---KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
+K + EL++L + H NV + F + +D L H Q
Sbjct: 67 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 126
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----R 179
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 180 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 225
Query: 490 K 490
+
Sbjct: 226 R 226
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-- 326
+ ER + E I E + +G G +G+V F A+KK+
Sbjct: 6 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 65
Query: 327 ---KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
+K + EL++L + H NV + F + +D L H Q
Sbjct: 66 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 125
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----R 178
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 179 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 224
Query: 490 K 490
+
Sbjct: 225 R 225
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-- 326
+ ER + E I E + +G G +G+V F A+KK+
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 327 ---KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
+K + EL++L + H NV + F + +D L H Q
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----R 173
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 490 K 490
+
Sbjct: 220 R 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-- 326
+ ER + E I E + +G G +G+V F A+KK+
Sbjct: 3 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 62
Query: 327 ---KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
+K + EL++L + H NV + F + +D L H Q
Sbjct: 63 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 122
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----R 175
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 176 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 221
Query: 490 K 490
+
Sbjct: 222 R 222
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-- 326
+ ER + E I E + +G G +G+V F A+KK+
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 327 ---KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
+K + EL++L + H NV + F + +D L H Q
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----R 173
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 490 K 490
+
Sbjct: 220 R 220
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 102/242 (42%), Gaps = 54/242 (22%)
Query: 281 IFSLEEIEEATNNFDESRIIGRGGFGNVYFGLLG-------DREAAIKKMRSNKSK---- 329
++ +E E A SR +G+G FG VY G+ + AIK + S
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 330 EFFAELKVLCKI--HHIN-------------VFISTFGNGSLSDHL--------HDPLLK 366
EF E V+ + HH+ V + G L +L ++P+L
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 367 GHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKL 426
P + + Q+A + A G+ Y++ + ++VHRD+ N ++ + K+ DFG+ +
Sbjct: 127 ---PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 180
Query: 427 EERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
T+ G G LP R+ S+ + TT +DV++FGVVL E+
Sbjct: 181 IYETDYYRK------GGKGLLP--------VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
Query: 487 IT 488
T
Sbjct: 227 AT 228
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-- 326
+ ER + E I E + +G G +G+V F A+KK+
Sbjct: 13 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 72
Query: 327 ---KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
+K + EL++L + H NV + F + +D L H Q
Sbjct: 73 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 132
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----R 185
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 186 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 231
Query: 490 K 490
+
Sbjct: 232 R 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-- 326
+ ER + E I E + +G G +G+V F A+KK+
Sbjct: 13 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 72
Query: 327 ---KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
+K + EL++L + H NV + F + +D L H Q
Sbjct: 73 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 132
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----R 185
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 186 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 231
Query: 490 K 490
+
Sbjct: 232 R 232
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 95/226 (42%), Gaps = 53/226 (23%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDREA----AIKKM------RSNKSKEFFAELKVLC 339
A +F+ R +G+G FGNVY L ++++ A+K + ++ + E+++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 340 KIHHINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD 392
+ H N+ L + HD L+ + PL R L D + YI +
Sbjct: 67 HLRHPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 393 --------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
H+K R +HRDIK N+LL K+ADFG + L GT
Sbjct: 120 LANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRAALCGTL 173
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
YLPPE I + MH K D+++ GV+ E + GK
Sbjct: 174 DYLPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 206
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-- 326
+ ER + E I E + +G G +G+V F A+KK+
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 327 ---KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
+K + EL++L + H NV + F + +D L H Q
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----R 173
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 490 K 490
+
Sbjct: 220 R 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-- 326
+ ER + E I E + +G G +G+V F A+KK+
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 327 ---KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
+K + EL++L + H NV + F + +D L H Q
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----R 173
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 490 K 490
+
Sbjct: 220 R 220
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 102/242 (42%), Gaps = 54/242 (22%)
Query: 281 IFSLEEIEEATNNFDESRIIGRGGFGNVYFGLLG-------DREAAIKKMRSNKSK---- 329
++ +E E A SR +G+G FG VY G+ + AIK + S
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 330 EFFAELKVLCKI--HHIN-------------VFISTFGNGSLSDHL--------HDPLLK 366
EF E V+ + HH+ V + G L +L ++P+L
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 367 GHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKL 426
P + + Q+A + A G+ Y++ + ++VHRD+ N ++ + K+ DFG+ +
Sbjct: 128 ---PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 181
Query: 427 EERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
T+ G G LP R+ S+ + TT +DV++FGVVL E+
Sbjct: 182 IYETDYYRK------GGKGLLP--------VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
Query: 487 IT 488
T
Sbjct: 228 AT 229
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 99/234 (42%), Gaps = 50/234 (21%)
Query: 291 TNNFDESRIIGRGGFGNVYFG--LLGDREAAIKKMRSNKSKE------FFAELKVLCKIH 342
++ ++ I+G GG V+ L R+ A+K +R++ +++ F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 343 HINVFISTFGNG--------------------SLSDHLHDPLLKGHQPLTWTARTQIALD 382
H + ++ + G +L D +H P+T ++ D
Sbjct: 71 HPAI-VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIAD 124
Query: 383 AAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVG 442
A + + + H + +HRD+K +NI++ KV DFG+ + + ++G
Sbjct: 125 ACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
T YL PE + R D V ++DV++ G VL E++TG+ D
Sbjct: 182 TAQYLSPE-----QARGD--------SVDARSDVYSLGCVLYEVLTGEPPFTGD 222
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-- 326
+ ER + E I E + +G G +G+V F A+KK+
Sbjct: 12 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 71
Query: 327 ---KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
+K + EL++L + H NV + F + +D L H Q
Sbjct: 72 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 131
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 132 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA----R 184
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 185 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 230
Query: 490 K 490
+
Sbjct: 231 R 231
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-- 326
+ ER + E I E + +G G +G+V F A+KK+
Sbjct: 24 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 83
Query: 327 ---KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
+K + EL++L + H NV + F + +D L H Q
Sbjct: 84 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 143
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 144 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----R 196
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 197 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 242
Query: 490 K 490
+
Sbjct: 243 R 243
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 44/218 (20%)
Query: 293 NFDESRIIGRGGFGNVYFG--LLGDREAAIK-----KMRSNKSKEFFAELKVLCKIHHIN 345
N+ + IG+G F V +L RE AIK ++ ++ F E++++ ++H N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 346 V--------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
+ I + +G + D L+ + AR++ ++Y H
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGG---EVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCH 131
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEY 451
+ R VHRD+K N+LLD + K+ADFG E T ++ A G P Y PE
Sbjct: 132 ---QKRIVHRDLKAENLLLDADMNIKIADFGFSN--EFTVGGKLDA--FCGAPPYAAPEL 184
Query: 452 IFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
K++ + DV++ GV+L L++G
Sbjct: 185 FQGKKYD------------GPEVDVWSLGVILYTLVSG 210
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 92/224 (41%), Gaps = 49/224 (21%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDRE--AAIKKM------RSNKSKEFFAELKVLCKI 341
A +F+ R +G+G FGNVY + A+K + ++ + E+++ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 342 HHINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD-- 392
H N+ L + HD L+ + PL R L D + YI +
Sbjct: 68 RHPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 120
Query: 393 ------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
H+K R +HRDIK N+LL K+A+FG + T L GT Y
Sbjct: 121 NALSYCHSK-RVIHRDIKPENLLLGSAGELKIANFGWS-----VHAPSSRRTTLCGTLDY 174
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
LPPE I + MH K D+++ GV+ E + GK
Sbjct: 175 LPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 205
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-- 326
+ ER + E I E + +G G +G+V F A+KK+
Sbjct: 12 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 71
Query: 327 ---KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
+K + EL++L + H NV + F + +D L H Q
Sbjct: 72 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 131
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 132 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----R 184
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 185 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 230
Query: 490 K 490
+
Sbjct: 231 R 231
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 99/241 (41%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKM-RSNK 327
+ ER + E I E + +G G +G+V F A+KK+ R +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 328 S----KEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
S K + EL++L + H NV + F + +D L H Q
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQ 120
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA----R 173
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 490 K 490
+
Sbjct: 220 R 220
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 94/225 (41%), Gaps = 40/225 (17%)
Query: 283 SLEEIEEATNNFDESRIIGRGGFGNVYFGLLGDRE--AAIKKMRSN--KSKEFFAELKVL 338
SL++ E + +G G +G VY G+ A+K ++ + + +EF E V+
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 61
Query: 339 CKIHHIN---------------VFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDA 383
+I H N + I G+L D+L + Q ++ +A
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC---NRQEVSAVVLLYMATQI 118
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGT 443
+ +EY+ K ++HRD+ N L+ + KVADFGL +L M
Sbjct: 119 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL--------MTGDTXTAH 167
Query: 444 PGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
G P ++ S+ + + K+DV+AFGV+L E+ T
Sbjct: 168 AGAKFP-------IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 92/224 (41%), Gaps = 49/224 (21%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDRE--AAIKKM------RSNKSKEFFAELKVLCKI 341
A +F+ R +G+G FGNVY + A+K + ++ + E+++ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 342 HHINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD-- 392
H N+ L + HD L+ + PL R L D + YI +
Sbjct: 92 RHPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 144
Query: 393 ------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
H+K R +HRDIK N+LL K+ADFG + + L GT Y
Sbjct: 145 NALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD-----LCGTLDY 198
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
LPPE I + MH K D+++ GV+ E + GK
Sbjct: 199 LPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 229
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-- 326
+ ER + E I E + +G G +G+V F A+KK+
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 327 ---KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
+K + EL++L + H NV + F + +D L H Q
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQ 120
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----R 173
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 490 K 490
+
Sbjct: 220 R 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 42/225 (18%)
Query: 287 IEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-----KSKEFFAELKVLC 339
I E + +G G +G+V F A+KK+ +K + EL++L
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 340 KIHHINV--FISTFGNGSLSDHLHDPLLKGH------------QPLTWTARTQIALDAAK 385
+ H NV + F + +D L H Q LT + +
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 143
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G++YIH A +HRD+K SN+ +++ K+ DFGL R + EM T V T
Sbjct: 144 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEM--TGYVATRW 194
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y PE + + + D+++ G ++AEL+TG+
Sbjct: 195 YRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 38/215 (17%)
Query: 300 IGRGGFGNVYFGL--LGDREAAIKKMRS-----NKSKEFFAELKVLCKIHHINV------ 346
IG G +G V L ++ AIKK+ + +K ELK+L H N+
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 347 ---------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKAR 397
F S + L + ++ QPLT +G++Y+H A+
Sbjct: 122 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH---SAQ 178
Query: 398 YVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPGYLPPEYIFVKR 456
+HRD+K SN+L+++ K+ DFG+ + L E + T V T Y PE +
Sbjct: 179 VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM---- 234
Query: 457 FRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKR 491
+H + T D+++ G + E++ ++
Sbjct: 235 --LSLH------EYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 96/241 (39%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNVYFGL---LGDREAAIKKMRSNK 327
+ ER + E I E + +G G +G+V G R A K R +
Sbjct: 21 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 80
Query: 328 S----KEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
S K + EL++L + H NV + F + +D L H Q
Sbjct: 81 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 140
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----R 193
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 194 HTDDEMXGX--VATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 239
Query: 490 K 490
+
Sbjct: 240 R 240
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-- 326
+ ER + E I E + +G G +G+V F A+KK+
Sbjct: 20 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 79
Query: 327 ---KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
+K + EL++L + H NV + F + +D L H Q
Sbjct: 80 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 139
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 140 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----R 192
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 193 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 238
Query: 490 K 490
+
Sbjct: 239 R 239
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 42/225 (18%)
Query: 287 IEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-----KSKEFFAELKVLC 339
I E + +G G +G+V F A+KK+ +K + EL++L
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 340 KIHHINV--FISTFGNGSLSDHLHDPLLKGH------------QPLTWTARTQIALDAAK 385
+ H NV + F + +D L H Q LT + +
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 141
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G++YIH A +HRD+K SN+ +++ K+ DFGL R + EM T V T
Sbjct: 142 GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA----RHTDDEM--TGYVATRW 192
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y PE + + + D+++ G ++AEL+TG+
Sbjct: 193 YRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 20/121 (16%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G++Y H H VHRD+K N+LLD + AK+ADFGL + ++ E L G+P
Sbjct: 128 GVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNM---MSDGEFLRXS-CGSPN 180
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKS 505
Y PE I + L + D+++ GV+L L+ G DD PT K
Sbjct: 181 YAAPEVISGR------------LYAGPEVDIWSSGVILYALLCGTLPF-DDDHVPTLFKK 227
Query: 506 L 506
+
Sbjct: 228 I 228
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-- 326
+ ER + E I E + +G G +G+V F A+KK+
Sbjct: 21 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 80
Query: 327 ---KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
+K + EL++L + H NV + F + +D L H Q
Sbjct: 81 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 140
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----R 193
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 194 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 239
Query: 490 K 490
+
Sbjct: 240 R 240
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 94/220 (42%), Gaps = 48/220 (21%)
Query: 293 NFDESRIIGRGGFGNVYFG--LLGDREAAIK-----KMRSNKSKEFFAELKVLCKIHHIN 345
N+ + IG+G F V +L RE AIK ++ ++ F E++++ ++H N
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 346 V--------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
+ I + +G + D L+ + AR++ ++Y H
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGG---EVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCH 128
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLAT--RLVGTPGYLPP 449
+ R VHRD+K N+LLD + K+ADFG +NE + G+P Y P
Sbjct: 129 ---QKRIVHRDLKAENLLLDADMNIKIADFGF------SNEFTVGGKLDTFCGSPPYAAP 179
Query: 450 EYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
E K++ + DV++ GV+L L++G
Sbjct: 180 ELFQGKKYD------------GPEVDVWSLGVILYTLVSG 207
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 91/224 (40%), Gaps = 49/224 (21%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDRE--AAIKKM------RSNKSKEFFAELKVLCKI 341
A +F+ R +G+G FGNVY + A+K + ++ + E+++ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 342 HHINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD-- 392
H N+ L + HD L+ + PL R L D + YI +
Sbjct: 68 RHPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 120
Query: 393 ------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
H+K R +HRDIK N+LL K+ADFG + L GT Y
Sbjct: 121 NALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRXXLCGTLDY 174
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
LPPE I + MH K D+++ GV+ E + GK
Sbjct: 175 LPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 205
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 42/225 (18%)
Query: 287 IEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-----KSKEFFAELKVLC 339
I E + +G G +G+V F A+KK+ +K + EL++L
Sbjct: 14 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 73
Query: 340 KIHHINV--FISTFGNGSLSDHLHDPLLKGH------------QPLTWTARTQIALDAAK 385
+ H NV + F + +D L H Q LT + +
Sbjct: 74 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 133
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G++YIH A +HRD+K SN+ +++ K+ DFGL R + EM T V T
Sbjct: 134 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEM--TGYVATRW 184
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y PE + + + D+++ G ++AEL+TG+
Sbjct: 185 YRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 100/237 (42%), Gaps = 50/237 (21%)
Query: 291 TNNFDESRIIGRGGFGNVYFG--LLGDREAAIKKMRSNKSKE------FFAELKVLCKIH 342
++ ++ I+G GG V+ L R+ A+K +R++ +++ F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 343 HINVFISTFGNG--------------------SLSDHLHDPLLKGHQPLTWTARTQIALD 382
H + ++ + G +L D +H P+T ++ D
Sbjct: 71 HPAI-VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIAD 124
Query: 383 AAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVG 442
A + + + H + +HRD+K +NI++ KV DFG+ + + ++G
Sbjct: 125 ACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
T YL PE + R D V ++DV++ G VL E++TG+ D +
Sbjct: 182 TAQYLSPE-----QARGD--------SVDARSDVYSLGCVLYEVLTGEPPFTGDSPD 225
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 101/230 (43%), Gaps = 62/230 (26%)
Query: 300 IGRGGFGNVYFGLLGD--REAAIKKMR---SNKSKEFFA-ELKVLCKIHHINVF------ 347
+G GGFG V + D + AIK+ R S K++E + E++++ K++H NV
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 348 ---------------ISTFGNGSLSDHLHD-----PLLKGHQPLTWTARTQIALDAAKGI 387
+ G L +L+ L +G P+ RT ++ D + +
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG--PI----RTLLS-DISSAL 135
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDG---LRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
Y+H++ R +HRD+K NI+L G L K+ D G K ++ L T VGT
Sbjct: 136 RYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE----LCTEFVGTL 188
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALI 494
YL PE + K++ T D ++FG + E ITG R +
Sbjct: 189 QYLAPELLEQKKY-------------TVTVDYWSFGTLAFECITGFRPFL 225
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 42/225 (18%)
Query: 287 IEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-----KSKEFFAELKVLC 339
I E + +G G +G+V F A+KK+ +K + EL++L
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 340 KIHHINV--FISTFGNGSLSDHLHDPLLKGH------------QPLTWTARTQIALDAAK 385
+ H NV + F + +D L H Q LT + +
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 141
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G++YIH A +HRD+K SN+ +++ K+ DFGL R + EM T V T
Sbjct: 142 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEM--TGYVATRW 192
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y PE + + + D+++ G ++AEL+TG+
Sbjct: 193 YRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 42/225 (18%)
Query: 287 IEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-----KSKEFFAELKVLC 339
I E + +G G +G+V F A+KK+ +K + EL++L
Sbjct: 16 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 75
Query: 340 KIHHINV--FISTFGNGSLSDHLHDPLLKGH------------QPLTWTARTQIALDAAK 385
+ H NV + F + +D L H Q LT + +
Sbjct: 76 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 135
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G++YIH A +HRD+K SN+ +++ K+ DFGL R + EM T V T
Sbjct: 136 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEM--TGYVATRW 186
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y PE + + + D+++ G ++AEL+TG+
Sbjct: 187 YRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 110/279 (39%), Gaps = 56/279 (20%)
Query: 287 IEEATNNFDESRIIGRGGFGNVYFG--LLGDREAAIKKM------RSNKSKEFFAELKVL 338
I E +F ++G+G F VY + E AIK + ++ + E+K+
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 339 CKIHH---------------INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDA 383
C++ H + + + NG ++ +L + + +P +
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV----KPFSENEARHFMHQI 121
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGT 443
G+ Y+H H +HRD+ SN+LL + K+ADFGL + +EK L GT
Sbjct: 122 ITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY---TLCGT 175
Query: 444 PGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPT-- 501
P Y+ PE R + S DV++ G + L+ G+ D + T
Sbjct: 176 PNYISPE--IATRSAHGLES-----------DVWSLGCMFYTLLIGRPPFDTDTVKNTLN 222
Query: 502 -------KMKSLITIMAA-VAEWCLNEDAVDRPEMRDIV 532
+M S ++I A + L + DR + ++
Sbjct: 223 KVVLADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVL 261
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 96/226 (42%), Gaps = 53/226 (23%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDREA----AIKKM------RSNKSKEFFAELKVLC 339
A +F+ R +G+G FGNVY L ++++ A+K + ++ + E+++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 340 KIHHINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD 392
+ H N+ L + HD L+ + PL R L D + YI +
Sbjct: 67 HLRHPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 393 --------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
H+K R +HRDIK N+LL K+A+FG + T L GT
Sbjct: 120 LANALSYCHSK-RVIHRDIKPENLLLGSAGELKIANFGWS-----VHAPSSRRTTLCGTL 173
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
YLPPE I + MH K D+++ GV+ E + GK
Sbjct: 174 DYLPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 206
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-- 326
+ ER + E I E + +G G +G+V F A+KK+
Sbjct: 3 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 62
Query: 327 ---KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
+K + EL++L + H NV + F + +D L H Q
Sbjct: 63 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 122
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLA----R 175
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 176 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 221
Query: 490 K 490
+
Sbjct: 222 R 222
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 96/227 (42%), Gaps = 55/227 (24%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDREA----AIKKM------RSNKSKEFFAELKVLC 339
A +F+ R +G+G FGNVY L ++++ A+K + ++ + E+++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 340 KIHHINVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQI--------ALDAAKGIEYIH 391
+ H N+ L + HD + + L + R ++ D + YI
Sbjct: 69 HLRHPNIL-------RLYGYFHDAT-RVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT 120
Query: 392 D--------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGT 443
+ H+K R +HRDIK N+LL K+ADFG + T L GT
Sbjct: 121 ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGT 174
Query: 444 PGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
YLPPE I + MH K D+++ GV+ E + GK
Sbjct: 175 LDYLPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 208
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 42/225 (18%)
Query: 287 IEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-----KSKEFFAELKVLC 339
I E + +G G +G+V F A+KK+ +K + EL++L
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 340 KIHHINV--FISTFGNGSLSDHLHDPLLKGH------------QPLTWTARTQIALDAAK 385
+ H NV + F + +D L H Q LT + +
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 138
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G++YIH A +HRD+K SN+ +++ K+ DFGL R + EM T V T
Sbjct: 139 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEM--TGYVATRW 189
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y PE + + + D+++ G ++AEL+TG+
Sbjct: 190 YRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 42/225 (18%)
Query: 287 IEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-----KSKEFFAELKVLC 339
I E + +G G +G+V F A+KK+ +K + EL++L
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 340 KIHHINV--FISTFGNGSLSDHLHDPLLKGH------------QPLTWTARTQIALDAAK 385
+ H NV + F + +D L H Q LT + +
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 132
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G++YIH A +HRD+K SN+ +++ K+ DFGL R + EM T V T
Sbjct: 133 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEM--TGYVATRW 183
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y PE + + + D+++ G ++AEL+TG+
Sbjct: 184 YRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 101/230 (43%), Gaps = 62/230 (26%)
Query: 300 IGRGGFGNVYFGLLGD--REAAIKKMR---SNKSKEFFA-ELKVLCKIHHINVF------ 347
+G GGFG V + D + AIK+ R S K++E + E++++ K++H NV
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 348 ---------------ISTFGNGSLSDHLHD-----PLLKGHQPLTWTARTQIALDAAKGI 387
+ G L +L+ L +G P+ RT ++ D + +
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG--PI----RTLLS-DISSAL 134
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDG---LRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
Y+H++ R +HRD+K NI+L G L K+ D G K ++ L T VGT
Sbjct: 135 RYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE----LCTEFVGTL 187
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALI 494
YL PE + K++ T D ++FG + E ITG R +
Sbjct: 188 QYLAPELLEQKKY-------------TVTVDYWSFGTLAFECITGFRPFL 224
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 42/225 (18%)
Query: 287 IEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-----KSKEFFAELKVLC 339
I E + +G G +G+V F A+KK+ +K + EL++L
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 340 KIHHINV--FISTFGNGSLSDHLHDPLLKGH------------QPLTWTARTQIALDAAK 385
+ H NV + F + +D L H Q LT + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G++YIH A +HRD+K SN+ +++ K+ DFGL R + EM T V T
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEM--TGYVATRW 187
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y PE + + + D+++ G ++AEL+TG+
Sbjct: 188 YRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 40/225 (17%)
Query: 283 SLEEIEEATNNFDESRIIGRGGFGNVYFGLLGDRE--AAIKKMRSN--KSKEFFAELKVL 338
SL++ E + +G G FG VY G+ A+K ++ + + +EF E V+
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 61
Query: 339 CKIHHINV--------------FISTFGN-GSLSDHLHDPLLKGHQPLTWTARTQIALDA 383
+I H N+ I+ F G+L D+L + Q ++ +A
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC---NRQEVSAVVLLYMATQI 118
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGT 443
+ +EY+ K ++HRD+ N L+ + KVADFGL +L M
Sbjct: 119 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL--------MTGDTXTAH 167
Query: 444 PGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
G P ++ S+ + + K+DV+AFGV+L E+ T
Sbjct: 168 AGAKFP-------IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 91/225 (40%), Gaps = 42/225 (18%)
Query: 287 IEEATNNFDESRIIGRGGFGNVYFGL---LGDREAAIKKMRSNKS----KEFFAELKVLC 339
I E + +G G +G+V G R A K R +S K + EL++L
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 340 KIHHINV--FISTFGNGSLSDHLHDPLLKGH------------QPLTWTARTQIALDAAK 385
+ H NV + F + +D L H Q LT + +
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 132
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G++YIH A +HRD+K SN+ +++ K+ DFGL R + EM V T
Sbjct: 133 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMAG--FVATRW 183
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y PE + + + D+++ G ++AEL+TG+
Sbjct: 184 YRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 91/228 (39%), Gaps = 57/228 (25%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDREAAIKKM------------RSNKSKEFFAELKV 337
A +F+ R +G+G FGNVY RE K + ++ + E+++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLA----REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 338 LCKIHHINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYI 390
+ H N+ L + HD L+ + PL R L D + YI
Sbjct: 65 QSHLRHPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 391 HD--------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVG 442
+ H+K R +HRDIK N+LL K+ADFG + + L G
Sbjct: 118 TELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD-----LCG 171
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
T YLPPE I + MH K D+++ GV+ E + GK
Sbjct: 172 TLDYLPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 206
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 88/231 (38%), Gaps = 47/231 (20%)
Query: 292 NNFDESRIIGRGGFGNV----------YFGLLGDREAAI------------KKMRSNKSK 329
N+FD +++G+G FG V Y+ + R+ I ++ N
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 330 EFFAELKVLCKIHHINVFISTFGNGS-LSDHLHDPLLKGHQPLTWTARTQIALDAAKGIE 388
F LK + H F+ + NG L HL + T + +E
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALE 119
Query: 389 YIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLP 448
Y+H V+RDIK N++LD K+ DFGL K E ++ + T GTP YL
Sbjct: 120 YLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKT-FCGTPEYLA 173
Query: 449 PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
PE + + D + GVV+ E++ G+ D E
Sbjct: 174 PEVL-------------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 40/208 (19%)
Query: 300 IGRGGFGNVYFGLLGDREAAI---KKMRSNKSKE----FFAELKVLCKIHHINV------ 346
+G G FG VY ++E ++ K+ KS+E + E+ +L H N+
Sbjct: 45 LGDGAFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 347 --------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARY 398
+ F G D + +L+ +PLT + + + Y+HD+ +
Sbjct: 103 FYYENNLWILIEFCAGGAVDAV---MLELERPLTESQIQVVCKQTLDALNYLHDN---KI 156
Query: 399 VHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFR 458
+HRD+K NIL K+ADFG+ R ++ +GTP ++ PE +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRR---DSFIGTPYWMAPEVV------ 207
Query: 459 FDMHSSVMELQVTTKTDVFAFGVVLAEL 486
M + + K DV++ G+ L E+
Sbjct: 208 --MCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 42/225 (18%)
Query: 287 IEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-----KSKEFFAELKVLC 339
I E + +G G +G+V F A+KK+ +K + EL++L
Sbjct: 14 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 73
Query: 340 KIHHINV--FISTFGNGSLSDHLHDPLLKGH------------QPLTWTARTQIALDAAK 385
+ H NV + F + +D L H Q LT + +
Sbjct: 74 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 133
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G++YIH A +HRD+K SN+ +++ K+ DFGL R + EM T V T
Sbjct: 134 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEM--TGYVATRW 184
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y PE + + + D+++ G ++AEL+TG+
Sbjct: 185 YRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 113/272 (41%), Gaps = 58/272 (21%)
Query: 300 IGRGGFGNVYFGL-LGDREAAIKKMRSNKSKE--FFAELKVLCKIHH------------- 343
IG G FG V+ G L + AIK ++ E F E +V+ K+ H
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQ 94
Query: 344 --INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIA--LDAAKGIEYIHDHTKARYV 399
I + +G LSD+L Q + A T + LD +G+ Y+ + A +
Sbjct: 95 APICLVFEFMEHGCLSDYLRT------QRGLFAAETLLGMCLDVCEGMAYLEE---ACVI 145
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG-YLPPEYIFVKRFR 458
HRD+ N L+ + KV+DFG+ + +L + + G P ++ + F
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRF--------VLDDQYTSSTGTKFPVKWASPEVFS 197
Query: 459 FDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALI--RDDSEPT----------KMKSL 506
F +SS K+DV++FGV++ E+ + + R +SE K +
Sbjct: 198 FSRYSS--------KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA 249
Query: 507 ITIMAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
T + + C E DRP ++ L++I
Sbjct: 250 STHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 281
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 102/242 (42%), Gaps = 54/242 (22%)
Query: 281 IFSLEEIEEATNNFDESRIIGRGGFGNVYFGLLG-------DREAAIKKMRSNKSK---- 329
++ +E E A SR +G+G FG VY G+ + AIK + S
Sbjct: 36 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 95
Query: 330 EFFAELKVLCKI--HHIN-------------VFISTFGNGSLSDHL--------HDPLLK 366
EF E V+ + HH+ V + G L +L ++P+L
Sbjct: 96 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 155
Query: 367 GHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKL 426
P + + Q+A + A G+ Y++ + ++VHRD+ N ++ + K+ DFG+ +
Sbjct: 156 ---PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 209
Query: 427 EERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
T+ G G LP R+ S+ + TT +DV++FGVVL E+
Sbjct: 210 IYETDYYRK------GGKGLLP--------VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
Query: 487 IT 488
T
Sbjct: 256 AT 257
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 42/225 (18%)
Query: 287 IEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-----KSKEFFAELKVLC 339
I E + +G G +G+V F A+KK+ +K + EL++L
Sbjct: 15 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 74
Query: 340 KIHHINV--FISTFGNGSLSDHLHDPLLKGH------------QPLTWTARTQIALDAAK 385
+ H NV + F + +D L H Q LT + +
Sbjct: 75 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 134
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G++YIH A +HRD+K SN+ +++ K+ DFGL R + EM T V T
Sbjct: 135 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEM--TGYVATRW 185
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y PE + + + D+++ G ++AEL+TG+
Sbjct: 186 YRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 99/234 (42%), Gaps = 50/234 (21%)
Query: 291 TNNFDESRIIGRGGFGNVYFG--LLGDREAAIKKMRSNKSKE------FFAELKVLCKIH 342
++ ++ I+G GG V+ L R+ A+K +R++ +++ F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 343 HINVFISTFGNG--------------------SLSDHLHDPLLKGHQPLTWTARTQIALD 382
H + ++ + G +L D +H P+T ++ D
Sbjct: 71 HPAI-VAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIAD 124
Query: 383 AAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVG 442
A + + + H + +HRD+K +NI++ KV DFG+ + + ++G
Sbjct: 125 ACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
T YL PE + R D V ++DV++ G VL E++TG+ D
Sbjct: 182 TAQYLSPE-----QARGD--------SVDARSDVYSLGCVLYEVLTGEPPFTGD 222
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-- 326
+ ER + E I E + +G G +G+V F A+KK+
Sbjct: 7 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 66
Query: 327 ---KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
+K + EL++L + H NV + F + +D L H Q
Sbjct: 67 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 126
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DFGL R
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLA----R 179
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 180 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 225
Query: 490 K 490
+
Sbjct: 226 R 226
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 42/225 (18%)
Query: 287 IEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-----KSKEFFAELKVLC 339
I E + +G G +G+V F A+KK+ +K + EL++L
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 82
Query: 340 KIHHINV--FISTFGNGSLSDHLHDPLLKGH------------QPLTWTARTQIALDAAK 385
+ H NV + F + +D L H Q LT + +
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 142
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G++YIH A +HRD+K SN+ +++ K+ DFGL R + EM T V T
Sbjct: 143 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEM--TGYVATRW 193
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y PE + + + D+++ G ++AEL+TG+
Sbjct: 194 YRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 95/226 (42%), Gaps = 53/226 (23%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDREA----AIKKM------RSNKSKEFFAELKVLC 339
A +F+ R +G+G FGNVY L ++++ A+K + ++ + E+++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 340 KIHHINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD 392
+ H N+ L + HD L+ + PL R L D + YI +
Sbjct: 67 HLRHPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 393 --------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
H+K R +HRDIK N+LL K+ADFG + L GT
Sbjct: 120 LANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRXXLCGTL 173
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
YLPPE I + MH K D+++ GV+ E + GK
Sbjct: 174 DYLPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 206
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 95/224 (42%), Gaps = 49/224 (21%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDRE--AAIKKM------RSNKSKEFFAELKVLCKI 341
A +F+ R +G+G FGNVY + A+K + ++ + E+++ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 342 HHINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD-- 392
H N+ L + HD L+ + PL R L D + YI +
Sbjct: 67 RHPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 119
Query: 393 ------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
H+K R +HRDIK N+LL K+ADFG + ++ ++ L GT Y
Sbjct: 120 NALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRDTLC----GTLDY 173
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
LPPE I + MH K D+++ GV+ E + GK
Sbjct: 174 LPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 204
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 95/226 (42%), Gaps = 53/226 (23%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDREA----AIKKM------RSNKSKEFFAELKVLC 339
A +F+ R +G+G FGNVY L ++++ A+K + ++ + E+++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 340 KIHHINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD 392
+ H N+ L + HD L+ + PL R L D + YI +
Sbjct: 64 HLRHPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 393 --------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
H+K R +HRDIK N+LL K+ADFG + L GT
Sbjct: 117 LANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRXXLCGTL 170
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
YLPPE I + MH K D+++ GV+ E + GK
Sbjct: 171 DYLPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 203
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 95/226 (42%), Gaps = 53/226 (23%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDREA----AIKKM------RSNKSKEFFAELKVLC 339
A +F+ R +G+G FGNVY L ++++ A+K + ++ + E+++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 340 KIHHINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD 392
+ H N+ L + HD L+ + PL R L D + YI +
Sbjct: 64 HLRHPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 393 --------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
H+K R +HRDIK N+LL K+ADFG + L GT
Sbjct: 117 LANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRAALCGTL 170
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
YLPPE I + MH K D+++ GV+ E + GK
Sbjct: 171 DYLPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 203
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKMRSNKSKEF----FAELKVLCKIHHINVF-ISTFG 352
IG G +G V + L AIKK+ + + + E+K+L + H N+ I+
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 353 NGSLSDHLHD-------------PLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
+ + D LLK Q L+ +G++YIH A +
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIH---SANVL 151
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SN+LL+ K+ DFGL ++ + ++ T V T Y PE + +
Sbjct: 152 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK--- 208
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
T D+++ G +LAE+++ +
Sbjct: 209 ---------GYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKMRSNKSKEF----FAELKVLCKIHHINVF-ISTFG 352
IG G +G V + L AIKK+ + + + E+K+L + H N+ I+
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 353 NGSLSDHLHD-------------PLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
+ + D LLK Q L+ +G++YIH A +
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIH---SANVL 152
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SN+LL+ K+ DFGL ++ + ++ T V T Y PE + +
Sbjct: 153 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK--- 209
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
T D+++ G +LAE+++ +
Sbjct: 210 ---------GYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKMRSNKSKEF----FAELKVLCKIHHINVF-ISTFG 352
IG G +G V + L AIKK+ + + + E+K+L + H N+ I+
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 353 NGSLSDHLHD-------------PLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
+ + D LLK Q L+ +G++YIH A +
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIH---SANVL 143
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SN+LL+ K+ DFGL ++ + ++ T V T Y PE + +
Sbjct: 144 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK--- 200
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
T D+++ G +LAE+++ +
Sbjct: 201 ---------GYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKMRSNKSKEF----FAELKVLCKIHHINVF-ISTFG 352
IG G +G V + L AIKK+ + + + E+K+L + H N+ I+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 353 NGSLSDHLHD-------------PLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
+ + D LLK Q L+ +G++YIH A +
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIH---SANVL 150
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SN+LL+ K+ DFGL ++ + ++ T V T Y PE + +
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK--- 207
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
T D+++ G +LAE+++ +
Sbjct: 208 ---------GYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKMRSNKSKEF----FAELKVLCKIHHINVF-ISTFG 352
IG G +G V + L AIKK+ + + + E+K+L + H N+ I+
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 353 NGSLSDHLHD-------------PLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
+ + D LLK Q L+ +G++YIH A +
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIH---SANVL 144
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SN+LL+ K+ DFGL ++ + ++ T V T Y PE + +
Sbjct: 145 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK--- 201
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
T D+++ G +LAE+++ +
Sbjct: 202 ---------GYTKSIDIWSVGCILAEMLSNR 223
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 110/278 (39%), Gaps = 59/278 (21%)
Query: 297 SRIIGRGGFGNVYFGLLGDREA-----AIKKMRSN----KSKEFFAELKVLCKIHHINV- 346
+RI+G G FG VY G+ + + A+K + + ++F +E ++ + H ++
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 347 -------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDH 393
+ + G L +L + L +L K + Y+
Sbjct: 89 KLIGIIEEEPTWIIMELYPYGELGHYLE----RNKNSLKVLTLVLYSLQICKAMAYLE-- 142
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
VHRDI NIL+ K+ DFGL + E + + TRL ++ PE I
Sbjct: 143 -SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESIN 199
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKR------------ALIRDDSEP 500
+RF TT +DV+ F V + E+++ GK+ L + D P
Sbjct: 200 FRRF-------------TTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLP 246
Query: 501 TKMKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
K ++ + C + D DRP ++V LS +
Sbjct: 247 -KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 283
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 99/237 (41%), Gaps = 60/237 (25%)
Query: 293 NFDESRIIGRGGFGNVYFGL--LGDREAAIKKMR-SNKS---KEFFAELKVLCKIHHINV 346
+F+ + +GRGGFG V+ + D AIK++R N+ ++ E+K L K+ H
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG- 64
Query: 347 FISTFGNGSLSDHLHDPL------------------------LKGHQPLTWTART---QI 379
I + N L + + L + G + R+ I
Sbjct: 65 -IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHI 123
Query: 380 ALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATR 439
L A+ +E++H +HRD+K SNI KV DFGLV ++ E++ + T
Sbjct: 124 FLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 180
Query: 440 L---------VGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELI 487
+ VGT Y+ PE I + + K D+F+ G++L EL+
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQIHGNSY-------------SHKVDIFSLGLILFELL 224
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 40/208 (19%)
Query: 300 IGRGGFGNVYFGLLGDREAAI---KKMRSNKSKE----FFAELKVLCKIHHINV------ 346
+G G FG VY ++E ++ K+ KS+E + E+ +L H N+
Sbjct: 45 LGDGAFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 347 --------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARY 398
+ F G D + +L+ +PLT + + + Y+HD+ +
Sbjct: 103 FYYENNLWILIEFCAGGAVDAV---MLELERPLTESQIQVVCKQTLDALNYLHDN---KI 156
Query: 399 VHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFR 458
+HRD+K NIL K+ADFG+ R ++ +GTP ++ PE +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRR---DXFIGTPYWMAPEVV------ 207
Query: 459 FDMHSSVMELQVTTKTDVFAFGVVLAEL 486
M + + K DV++ G+ L E+
Sbjct: 208 --MCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKMRSNKSKEF----FAELKVLCKIHHINVF-ISTFG 352
IG G +G V + L AIKK+ + + + E+K+L + H N+ I+
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 353 NGSLSDHLHD-------------PLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
+ + D LLK Q L+ +G++YIH A +
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIH---SANVL 144
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SN+LL+ K+ DFGL ++ + ++ T V T Y PE + +
Sbjct: 145 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK--- 201
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
T D+++ G +LAE+++ +
Sbjct: 202 ---------GYTKSIDIWSVGCILAEMLSNR 223
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 110/279 (39%), Gaps = 61/279 (21%)
Query: 297 SRIIGRGGFGNVYFGLLGDREA-----AIKKMR-----SNKSKEFFAELKVLCKIHHINV 346
+RI+G G FG VY G+ + + A+K + NK K F +E ++ + H ++
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK-FMSEAVIMKNLDHPHI 71
Query: 347 --------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHD 392
+ + G L +L + L +L K + Y+
Sbjct: 72 VKLIGIIEEEPTWIIMELYPYGELGHYLE----RNKNSLKVLTLVLYSLQICKAMAYLE- 126
Query: 393 HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
VHRDI NIL+ K+ DFGL + E + + TRL ++ PE I
Sbjct: 127 --SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESI 182
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKR------------ALIRDDSE 499
+RF TT +DV+ F V + E+++ GK+ L + D
Sbjct: 183 NFRRF-------------TTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRL 229
Query: 500 PTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
P K ++ + C + D DRP ++V LS +
Sbjct: 230 P-KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 267
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 107/248 (43%), Gaps = 49/248 (19%)
Query: 270 DVTVLESERTIIFSLEEIEEATNNFDESRIIGRGGFGNVYFGL--LGDREAAIKKM---- 323
D +LE R II S+ + ++ F++ IG+G G VY + +E AI++M
Sbjct: 3 DEEILEKLR-IIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQ 58
Query: 324 --------------RSNKSKEFFAELKVLCKIHHINVFISTFGNGSLSDHLHDPLLKGHQ 369
R NK+ L + V + GSL+D + + + Q
Sbjct: 59 QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ 118
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
+ + + +E++H + + +HR+IK+ NILL K+ DFG +
Sbjct: 119 ------IAAVCRECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCA--QI 167
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
T E+ +T +VGTP ++ PE + K + K D+++ G++ E+I G
Sbjct: 168 TPEQSKRST-MVGTPYWMAPEVVTRKAY-------------GPKVDIWSLGIMAIEMIEG 213
Query: 490 KRALIRDD 497
+ + ++
Sbjct: 214 EPPYLNEN 221
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 110/278 (39%), Gaps = 59/278 (21%)
Query: 297 SRIIGRGGFGNVYFGLLGDREA-----AIKKMRSN----KSKEFFAELKVLCKIHHINV- 346
+RI+G G FG VY G+ + + A+K + + ++F +E ++ + H ++
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 347 -------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDH 393
+ + G L +L + L +L K + Y+
Sbjct: 77 KLIGIIEEEPTWIIMELYPYGELGHYLE----RNKNSLKVLTLVLYSLQICKAMAYLE-- 130
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
VHRDI NIL+ K+ DFGL + E + + TRL ++ PE I
Sbjct: 131 -SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESIN 187
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKR------------ALIRDDSEP 500
+RF TT +DV+ F V + E+++ GK+ L + D P
Sbjct: 188 FRRF-------------TTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLP 234
Query: 501 TKMKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
K ++ + C + D DRP ++V LS +
Sbjct: 235 -KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKMRSNKSKEF----FAELKVLCKIHHINVF-ISTFG 352
IG G +G V + L AIKK+ + + + E+K+L + H N+ I+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 353 NGSLSDHLHD-------------PLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
+ + D LLK Q L+ +G++YIH A +
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKC-QHLSNDHICYFLYQILRGLKYIH---SANVL 150
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SN+LL+ K+ DFGL ++ + ++ T V T Y PE + +
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK--- 207
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
T D+++ G +LAE+++ +
Sbjct: 208 ---------GYTKSIDIWSVGCILAEMLSNR 229
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 88/231 (38%), Gaps = 47/231 (20%)
Query: 292 NNFDESRIIGRGGFGNV----------YFGLLGDREAAI------------KKMRSNKSK 329
N+FD +++G+G FG V Y+ + R+ I ++ N
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 330 EFFAELKVLCKIHHINVFISTFGNG-SLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIE 388
F LK + H F+ + NG L HL + T + +E
Sbjct: 68 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALE 122
Query: 389 YIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLP 448
Y+H V+RDIK N++LD K+ DFGL K E ++ + T GTP YL
Sbjct: 123 YLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKT-FCGTPEYLA 176
Query: 449 PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
PE + + D + GVV+ E++ G+ D E
Sbjct: 177 PEVL-------------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 214
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 102/235 (43%), Gaps = 51/235 (21%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIH 342
+ NF + IG G +G VY L A+KK+R + E E+ +L +++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 343 HINV--------------FISTFGNGSLSDHLHDPLLKG-HQPLTWTARTQIALDAAKGI 387
H N+ + F + L D + L G PL + Q+ +G+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLL----QGL 116
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTP 444
+ H H R +HRD+K N+L++ K+ADFGL + + RT E++ T
Sbjct: 117 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------TL 167
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
Y PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 168 WYRAPEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 209
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 102/235 (43%), Gaps = 51/235 (21%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIH 342
+ NF + IG G +G VY L A+KK+R + E E+ +L +++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 343 HINV--------------FISTFGNGSLSDHLHDPLLKG-HQPLTWTARTQIALDAAKGI 387
H N+ + F + L D + L G PL + Q+ +G+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLL----QGL 119
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTP 444
+ H H R +HRD+K N+L++ K+ADFGL + + RT E++ T
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------TL 170
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
Y PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 171 WYRAPEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 212
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 88/231 (38%), Gaps = 47/231 (20%)
Query: 292 NNFDESRIIGRGGFGNV----------YFGLLGDREAAI------------KKMRSNKSK 329
N+FD +++G+G FG V Y+ + R+ I ++ N
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 330 EFFAELKVLCKIHHINVFISTFGNGS-LSDHLHDPLLKGHQPLTWTARTQIALDAAKGIE 388
F LK + H F+ + NG L HL + T + +E
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALE 119
Query: 389 YIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLP 448
Y+H V+RDIK N++LD K+ DFGL K E ++ + T GTP YL
Sbjct: 120 YLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKT-FCGTPEYLA 173
Query: 449 PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
PE + + D + GVV+ E++ G+ D E
Sbjct: 174 PEVL-------------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 97/222 (43%), Gaps = 53/222 (23%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDREA----AIKKM------RSNKSKEFFAELKVLCKIH 342
+FD R +G+G FGNVY L +R++ A+K + ++ + E+++ +
Sbjct: 13 DFDIGRPLGKGKFGNVY--LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 343 HINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD--- 392
H N+ L + HD L+ + PL R L D + YI +
Sbjct: 71 HPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELAN 123
Query: 393 -----HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYL 447
H+K R +HRDIK N+LL K+ADFG + ++ ++ L GT YL
Sbjct: 124 ALSYCHSK-RVIHRDIKPENLLLGSNGELKIADFGW-SVHAPSSRRDTLC----GTLDYL 177
Query: 448 PPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
PPE I + MH K D+++ GV+ E + G
Sbjct: 178 PPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVG 206
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 103/235 (43%), Gaps = 49/235 (20%)
Query: 289 EATNNFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKI 341
E NF + IG G +G VY L A+KK+R + E E+ +L ++
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 342 HHINVF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GI 387
+H N+ I T L + LH L K + +A T I L K G+
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF---MDASALTGIPLPLIKSYLFQLLQGL 123
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTP 444
+ H H R +HRD+K N+L++ K+ADFGL + + RT E++ T
Sbjct: 124 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV------TL 174
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
Y PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 175 WYRAPEILLGXKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 216
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 54/238 (22%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYFGLLG-------DREAAIKKMRSNKSK----EFFA 333
+E E A SR +G+G FG VY G+ + AIK + S EF
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 334 ELKVLCKI--HHIN-------------VFISTFGNGSLSDHL--------HDPLLKGHQP 370
E V+ + HH+ V + G L +L ++P+L P
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA---P 121
Query: 371 LTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERT 430
+ + Q+A + A G+ Y++ + ++VHRD+ N ++ + K+ DFG+ + T
Sbjct: 122 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 178
Query: 431 NEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ G G LP R+ S+ + TT +DV++FGVVL E+ T
Sbjct: 179 DYYRK------GGKGLLP--------VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 36/217 (16%)
Query: 294 FDESRIIGRGGFGNVY--FGLLGDREAAIKKMRSNKSKEF----FAELKVLCKIHHINVF 347
+ + + IG G +G V + + AIKK+ + + + E+++L + H NV
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 348 -ISTFGNGSLSDHLHD-------------PLLKGHQPLTWTARTQIALDAAKGIEYIHDH 393
I S + + D LLK Q L+ +G++YIH
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQ-LSNDHICYFLYQILRGLKYIH-- 161
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
A +HRD+K SN+L++ K+ DFGL ++ + ++ T V T Y PE +
Sbjct: 162 -SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIML 220
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
+ T D+++ G +LAE+++ +
Sbjct: 221 NSK------------GYTKSIDIWSVGCILAEMLSNR 245
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 102/235 (43%), Gaps = 51/235 (21%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIH 342
+ NF + IG G +G VY L A+KK+R + E E+ +L +++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 343 HINV--------------FISTFGNGSLSDHLHDPLLKG-HQPLTWTARTQIALDAAKGI 387
H N+ + F + L D + L G PL + Q+ +G+
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLL----QGL 118
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTP 444
+ H H R +HRD+K N+L++ K+ADFGL + + RT E++ T
Sbjct: 119 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------TL 169
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
Y PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 170 WYRAPEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 211
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 40/225 (17%)
Query: 283 SLEEIEEATNNFDESRIIGRGGFGNVYFGLLGDRE--AAIKKMRSN--KSKEFFAELKVL 338
SL++ E + +G G +G VY G+ A+K ++ + + +EF E V+
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 61
Query: 339 CKIHHINV--------------FISTFGN-GSLSDHLHDPLLKGHQPLTWTARTQIALDA 383
+I H N+ I+ F G+L D+L + Q ++ +A
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC---NRQEVSAVVLLYMATQI 118
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGT 443
+ +EY+ K ++HRD+ N L+ + KVADFGL +L M
Sbjct: 119 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL--------MTGDTFTAH 167
Query: 444 PGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
G P ++ S+ + + K+DV+AFGV+L E+ T
Sbjct: 168 AGAKFP-------IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 40/224 (17%)
Query: 285 EEIEEATNNFDESRIIGR-GGFGNVYFGLLGDREAAI---KKMRSNKSKE----FFAELK 336
E + N D IIG G FG VY ++E ++ K+ KS+E + E+
Sbjct: 2 EHVTRDLNPEDFWEIIGELGDFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEID 59
Query: 337 VLCKIHHINV--------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALD 382
+L H N+ + F G D + +L+ +PLT + +
Sbjct: 60 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV---MLELERPLTESQIQVVCKQ 116
Query: 383 AAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVG 442
+ Y+HD+ + +HRD+K NIL K+ADFG+ RT + +G
Sbjct: 117 TLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRR--DSFIG 171
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
TP ++ PE + M + + K DV++ G+ L E+
Sbjct: 172 TPYWMAPEVV--------MCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKMRSNKSKEF----FAELKVLCKIHHINVF-ISTFG 352
IG G +G V + L AIKK+ + + + E+K+L + H N+ I+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 353 NGSLSDHLHD-------------PLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
+ + D LLK Q L+ +G++YIH A +
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIH---SANVL 150
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SN+LL+ K+ DFGL ++ + ++ T V T Y PE + +
Sbjct: 151 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK--- 207
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
T D+++ G +LAE+++ +
Sbjct: 208 ---------GYTKSIDIWSVGCILAEMLSNR 229
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 88/208 (42%), Gaps = 40/208 (19%)
Query: 300 IGRGGFGNVYFGLLGDRE--AAIKKMRSN--KSKEFFAELKVLCKIHHIN---------- 345
+G G +G VY G+ A+K ++ + + +EF E V+ +I H N
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 346 -----VFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
+ I G+L D+L + Q ++ +A + +EY+ K ++H
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLREC---NRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 134
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFD 460
RD+ N L+ + KVADFGL +L M G P ++
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRL--------MTGDTYTAHAGAKFP-------IKWT 179
Query: 461 MHSSVMELQVTTKTDVFAFGVVLAELIT 488
S+ + + K+DV+AFGV+L E+ T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 95/220 (43%), Gaps = 38/220 (17%)
Query: 299 IIGRGGFGNVYFGLLGDREAAIKKMRSNKSKEFFAELKVLCK--IHHINV--FISTFGNG 354
I RG FG V+ L + A+K + + +E ++ + H N+ FI+ G
Sbjct: 22 IKARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRG 81
Query: 355 S-------LSDHLHDP-----LLKGHQPLTWTARTQIALDAAKGIEYIHDHT-------- 394
S L HD LKG+ +TW +A ++G+ Y+H+
Sbjct: 82 SNLEVELWLITAFHDKGSLTDYLKGN-IITWNELCHVAETMSRGLSYLHEDVPWCRGEGH 140
Query: 395 KARYVHRDIKTSNILLDDGLRAKVADFGL-VKLEERTNEKEMLATRLVGTPGYLPPEYI- 452
K HRD K+ N+LL L A +ADFGL V+ E + VGT Y+ PE +
Sbjct: 141 KPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQ--VGTRRYMAPEVLE 198
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRA 492
F+ D + D++A G+VL EL++ +A
Sbjct: 199 GAINFQRD---------AFLRIDMYAMGLVLWELVSRCKA 229
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKMRSNKSKEF----FAELKVLCKIHHINVF-ISTFG 352
IG G +G V + L AIKK+ + + + E+K+L + H N+ I+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 353 NGSLSDHLHD-------------PLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
+ + D LLK Q L+ +G++YIH A +
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIH---SANVL 150
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SN+LL+ K+ DFGL ++ + ++ T V T Y PE + +
Sbjct: 151 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK--- 207
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
T D+++ G +LAE+++ +
Sbjct: 208 ---------GYTKSIDIWSVGCILAEMLSNR 229
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 20/121 (16%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
+EY H H + VHRD+K N+LLD+ L K+ADFGL + N L T G+P
Sbjct: 125 AVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTS-CGSPN 177
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKS 505
Y PE I K L + DV++ GV+L ++ +R D+S P K+
Sbjct: 178 YAAPEVISGK------------LYAGPEVDVWSCGVILYVMLC-RRLPFDDESIPVLFKN 224
Query: 506 L 506
+
Sbjct: 225 I 225
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-- 326
+ ER + E I E + +G G +G+V F A+KK+
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 327 ---KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
+K + EL++L + H NV + F + +D L H Q
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ D+GL R
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLA----R 173
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 490 K 490
+
Sbjct: 220 R 220
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 99/234 (42%), Gaps = 50/234 (21%)
Query: 291 TNNFDESRIIGRGGFGNVYFG--LLGDREAAIKKMRSNKSKE------FFAELKVLCKIH 342
++ ++ I+G GG V+ L R+ A+K +R++ +++ F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 343 HINVFISTFGNG--------------------SLSDHLHDPLLKGHQPLTWTARTQIALD 382
H + ++ + G +L D +H P+T ++ D
Sbjct: 71 HPAI-VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIAD 124
Query: 383 AAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVG 442
A + + + H + +HRD+K +NI++ KV DFG+ + + ++G
Sbjct: 125 ACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
T YL PE + R D V ++DV++ G VL E++TG+ D
Sbjct: 182 TAQYLSPE-----QARGD--------SVDARSDVYSLGCVLYEVLTGEPPFTGD 222
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 103/276 (37%), Gaps = 63/276 (22%)
Query: 293 NFDESRIIGRGGFGNVYFG--LLGDREAAIKK------MRSNKSKEFFAELKVLCKIHHI 344
NF + IGRG F VY LL A+KK M + + E+ +L +++H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 345 NV--FISTF-------------GNGSLS---DHLHDPLLKGHQPLTWTARTQIALDAAKG 386
NV + ++F G LS H + W Q+
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLC----SA 148
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+E++H R +HRDIK +N+ + K+ D GL + + K A LVGTP Y
Sbjct: 149 LEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRF---FSSKTTAAHSLVGTPYY 202
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD---------- 496
+ PE I + F K+D+++ G +L E+ + D
Sbjct: 203 MSPERIHENGYNF-------------KSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK 249
Query: 497 ----DSEPTKMKSLITIMAAVAEWCLNEDAVDRPEM 528
D P + + C+N D RP++
Sbjct: 250 IEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDV 285
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 88/208 (42%), Gaps = 40/208 (19%)
Query: 300 IGRGGFGNVYFGLLGDRE--AAIKKMRSN--KSKEFFAELKVLCKIHHIN---------- 345
+G G +G VY G+ A+K ++ + + +EF E V+ +I H N
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 346 -----VFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
+ I G+L D+L + Q ++ +A + +EY+ K ++H
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLREC---NRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 134
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFD 460
RD+ N L+ + KVADFGL +L M G P ++
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRL--------MTGDTYTAHAGAKFP-------IKWT 179
Query: 461 MHSSVMELQVTTKTDVFAFGVVLAELIT 488
S+ + + K+DV+AFGV+L E+ T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 20/121 (16%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
+EY H H + VHRD+K N+LLD+ L K+ADFGL + N L T G+P
Sbjct: 124 AVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTS-CGSPN 176
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKS 505
Y PE I K L + DV++ GV+L ++ +R D+S P K+
Sbjct: 177 YAAPEVISGK------------LYAGPEVDVWSCGVILYVMLC-RRLPFDDESIPVLFKN 223
Query: 506 L 506
+
Sbjct: 224 I 224
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 91/225 (40%), Gaps = 42/225 (18%)
Query: 287 IEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-----KSKEFFAELKVLC 339
I E + +G G +G+V F A+KK+ +K + EL++L
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 340 KIHHINV--FISTFGNGSLSDHLHDPLLKGH------------QPLTWTARTQIALDAAK 385
+ H NV + F + +D L H Q LT + +
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 143
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G++YIH A +HRD+K SN+ +++ K+ DFGL R EM T V T
Sbjct: 144 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTADEM--TGYVATRW 194
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y PE + + + D+++ G ++AEL+TG+
Sbjct: 195 YRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 101/242 (41%), Gaps = 54/242 (22%)
Query: 281 IFSLEEIEEATNNFDESRIIGRGGFGNVYFGLLG-------DREAAIKKMRSNKSK---- 329
++ +E E A SR +G+G FG VY G+ + AIK + S
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 330 EFFAELKVLCKI--HHIN-------------VFISTFGNGSLSDHL--------HDPLLK 366
EF E V+ + HH+ V + G L +L ++P+L
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 367 GHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKL 426
P + + Q+A + A G+ Y++ + ++VHRD+ N + + K+ DFG+ +
Sbjct: 121 ---PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRD 174
Query: 427 EERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
T+ G G LP R+ S+ + TT +DV++FGVVL E+
Sbjct: 175 IYETDYYRK------GGKGLLP--------VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
Query: 487 IT 488
T
Sbjct: 221 AT 222
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 20/121 (16%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
+EY H H + VHRD+K N+LLD+ L K+ADFGL + N L T G+P
Sbjct: 119 AVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTS-CGSPN 171
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKS 505
Y PE I K L + DV++ GV+L ++ +R D+S P K+
Sbjct: 172 YAAPEVISGK------------LYAGPEVDVWSCGVILYVMLC-RRLPFDDESIPVLFKN 218
Query: 506 L 506
+
Sbjct: 219 I 219
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 91/225 (40%), Gaps = 42/225 (18%)
Query: 287 IEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-----KSKEFFAELKVLC 339
I E + +G G +G+V F A+KK+ +K + EL++L
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 340 KIHHINV--FISTFGNGSLSDHLHDPLLKGH------------QPLTWTARTQIALDAAK 385
+ H NV + F + +D L H Q LT + +
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 143
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G++YIH A +HRD+K SN+ +++ K+ DFGL R EM T V T
Sbjct: 144 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTADEM--TGYVATRW 194
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y PE + + + D+++ G ++AEL+TG+
Sbjct: 195 YRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 94/226 (41%), Gaps = 53/226 (23%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDREA----AIKKM------RSNKSKEFFAELKVLC 339
A +F+ R +G+G FGNVY L ++++ A+K + ++ + E+++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 340 KIHHINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD 392
+ H N+ L + HD L+ + PL R L D + YI +
Sbjct: 69 HLRHPNIL-------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 393 --------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
H+K R +HRDIK N+LL K+ADFG + T L GT
Sbjct: 122 LANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTL 175
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
YLPPE I + K D+++ GV+ E + GK
Sbjct: 176 DYLPPEXIEGRXH-------------DEKVDLWSLGVLCYEFLVGK 208
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 91/225 (40%), Gaps = 42/225 (18%)
Query: 287 IEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-----KSKEFFAELKVLC 339
I E + +G G +G+V F A+KK+ +K + EL++L
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 340 KIHHINV--FISTFGNGSLSDHLHDPLLKGH------------QPLTWTARTQIALDAAK 385
+ H NV + F + +D L H Q LT + +
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 143
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G++YIH A +HRD+K SN+ +++ K+ DFGL R EM T V T
Sbjct: 144 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTADEM--TGYVATRW 194
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y PE + + + D+++ G ++AEL+TG+
Sbjct: 195 YRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 42/225 (18%)
Query: 287 IEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-----KSKEFFAELKVLC 339
I E + +G G +G+V F A+KK+ +K + EL++L
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 340 KIHHINV--FISTFGNGSLSDHLHDPLLKGH------------QPLTWTARTQIALDAAK 385
+ H NV + F + +D L H Q LT + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILR 136
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G++YIH A +HRD+K SN+ +++ K+ DFGL R + EM T V T
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLC----RHTDDEM--TGYVATRW 187
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y PE + + + D+++ G ++AEL+TG+
Sbjct: 188 YRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 77/240 (32%)
Query: 297 SRIIGRGGFGNVY----FGLLGDREAAIKKMRSNKS------KEFFAELKVLCKIHHINV 346
R +G G FG V+ + L ++ + +++ K K+F E ++L + H ++
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 347 --FISTFGNGSLSDHLHDPL---------------LKGHQP----------------LTW 373
F G+G DPL L+ H P L
Sbjct: 80 VKFYGVCGDG-------DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGL 132
Query: 374 TARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-----LEE 428
+ IA A G+ Y+ +VHRD+ T N L+ L K+ DFG+ +
Sbjct: 133 SQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYY 189
Query: 429 RTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
R ML R ++PPE I ++F TT++DV++FGV+L E+ T
Sbjct: 190 RVGGHTMLPIR------WMPPESIMYRKF-------------TTESDVWSFGVILWEIFT 230
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 20/121 (16%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
+EY H H + VHRD+K N+LLD+ L K+ADFGL + N L T G+P
Sbjct: 115 AVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTS-CGSPN 167
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKS 505
Y PE I K L + DV++ GV+L ++ +R D+S P K+
Sbjct: 168 YAAPEVISGK------------LYAGPEVDVWSCGVILYVMLC-RRLPFDDESIPVLFKN 214
Query: 506 L 506
+
Sbjct: 215 I 215
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 98/228 (42%), Gaps = 50/228 (21%)
Query: 291 TNNFDESRIIGRGGFGNVYFG--LLGDREAAIKKMRSNKSKE------FFAELKVLCKIH 342
++ ++ I+G GG V+ L R+ A+K +R++ +++ F E + ++
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 343 HINVFISTFGNG--------------------SLSDHLHDPLLKGHQPLTWTARTQIALD 382
H + ++ + G +L D +H P+T ++ D
Sbjct: 88 HPAI-VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIAD 141
Query: 383 AAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVG 442
A + + + H + +HRD+K +NI++ KV DFG+ + + ++G
Sbjct: 142 ACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 198
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
T YL PE + R D V ++DV++ G VL E++TG+
Sbjct: 199 TAQYLSPE-----QARGD--------SVDARSDVYSLGCVLYEVLTGE 233
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 91/219 (41%), Gaps = 37/219 (16%)
Query: 292 NNFDESRIIGRGGFGNVYFGLLGDREA--AIKKMRS------NKSKEFFAELKVLCKIHH 343
++F+ R IG+G FG V D + A+K M N+ + F EL+++ + H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 344 ---INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAK--------GIEYIHD 392
+N++ S F + + D LL G + K ++Y+ +
Sbjct: 75 PFLVNLWYS-FQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQN 133
Query: 393 HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
R +HRD+K NILLD+ + DF + + R E T + GT Y+ PE
Sbjct: 134 Q---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR----ETQITTMAGTKPYMAPE-- 184
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKR 491
M SS + D ++ GV EL+ G+R
Sbjct: 185 --------MFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 91/225 (40%), Gaps = 42/225 (18%)
Query: 287 IEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-----KSKEFFAELKVLC 339
I E + +G G +G+V F A+KK+ +K + EL++L
Sbjct: 40 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 99
Query: 340 KIHHINV--FISTFGNGSLSDHLHDPLLKGH------------QPLTWTARTQIALDAAK 385
+ H NV + F + +D L H Q LT + +
Sbjct: 100 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 159
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G++YIH A +HRD+K SN+ +++ K+ DFGL R + EM V T
Sbjct: 160 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMXG--YVATRW 210
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y PE + + + D+++ G ++AEL+TG+
Sbjct: 211 YRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKMRSNKSKEF----FAELKVLCKIHHINVF-ISTFG 352
IG G +G V + L AI+K+ + + + E+K+L + H N+ I+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 353 NGSLSDHLHD-------------PLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
+ + D LLK Q L+ +G++YIH A +
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIH---SANVL 150
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SN+LL+ K+ DFGL ++ + ++ T V T Y PE + +
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK--- 207
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
T D+++ G +LAE+++ +
Sbjct: 208 ---------GYTKSIDIWSVGCILAEMLSNR 229
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 103/235 (43%), Gaps = 49/235 (20%)
Query: 289 EATNNFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKI 341
E NF + IG G +G VY L A+KK+R + E E+ +L ++
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 342 HHINVF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GI 387
+H N+ I T L + LH L K + +A T I L K G+
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF---MDASALTGIPLPLIKSYLFQLLQGL 123
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTP 444
+ H H R +HRD+K N+L++ K+ADFGL + + RT E++ T
Sbjct: 124 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV------TL 174
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
Y PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 175 WYRAPEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 216
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 40/208 (19%)
Query: 300 IGRGGFGNVYFGLLGDRE--AAIKKMRSN--KSKEFFAELKVLCKIHHIN---------- 345
+G G +G VY G+ A+K ++ + + +EF E V+ +I H N
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 346 -----VFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
+ I G+L D+L + Q + +A + +EY+ K ++H
Sbjct: 86 EPPFYIIIEFMTYGNLLDYLREC---NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 139
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFD 460
RD+ N L+ + KVADFGL +L M G P ++
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRL--------MTGDTYTAHAGAKFP-------IKWT 184
Query: 461 MHSSVMELQVTTKTDVFAFGVVLAELIT 488
S+ + + K+DV+AFGV+L E+ T
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 31/156 (19%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
++Y H H VHRD+K N+LLD + AK+ADFGL + ++ E L T G+P Y
Sbjct: 124 VDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNM---MSDGEFLRTS-CGSPNY 176
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSL 506
PE I + L + D+++ GV+L L+ G D+ PT K +
Sbjct: 177 AAPEVISGR------------LYAGPEVDIWSCGVILYALLCGTLPF-DDEHVPTLFKKI 223
Query: 507 ITIMAAVAEWC-----------LNEDAVDRPEMRDI 531
+ + E+ L D + R ++DI
Sbjct: 224 RGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 102/231 (44%), Gaps = 49/231 (21%)
Query: 293 NFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIHHIN 345
NF + IG G +G VY L A+KK+R + E E+ +L +++H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 346 VF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GIEYIH 391
+ I T L + LH L K + +A T I L K G+ + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKF---MDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPGYLP 448
H R +HRD+K N+L++ K+ADFGL + + RT E++ T Y
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV------TLWYRA 171
Query: 449 PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 172 PEILLGXKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 209
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 92/224 (41%), Gaps = 49/224 (21%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDRE--AAIKKM------RSNKSKEFFAELKVLCKI 341
A +F+ R +G+G FGNVY + + A+K + ++ + E+++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 342 HHINVFISTFGNGSLSDHLHDP----LLKGHQPLTWTARTQIAL---DAAKGIEYIHD-- 392
H N+ L + HD L+ + PL R L D + YI +
Sbjct: 66 RHPNIL-------RLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 393 ------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
H+K + +HRDIK N+LL K+ADFG + L GT Y
Sbjct: 119 NALSYCHSK-KVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRAALCGTLDY 172
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
LPPE I + MH K D+++ GV+ E + GK
Sbjct: 173 LPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 203
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 40/208 (19%)
Query: 300 IGRGGFGNVYFGLLGDRE--AAIKKMRSN--KSKEFFAELKVLCKIHHIN---------- 345
+G G +G VY G+ A+K ++ + + +EF E V+ +I H N
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 346 -----VFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
+ I G+L D+L + Q + +A + +EY+ K ++H
Sbjct: 82 EPPFYIIIEFMTYGNLLDYLREC---NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 135
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFD 460
RD+ N L+ + KVADFGL +L M G P ++
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRL--------MTGDTXTAHAGAKFP-------IKWT 180
Query: 461 MHSSVMELQVTTKTDVFAFGVVLAELIT 488
S+ + + K+DV+AFGV+L E+ T
Sbjct: 181 APESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKMRSNKSKEF----FAELKVLCKIHHINVF-ISTFG 352
IG G +G V + + AIKK+ + + + E+K+L + H N+ I+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 353 NGSLSDHLHD-------------PLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
+ + D LLK Q L+ +G++YIH A +
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIH---SANVL 148
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SN+LL+ K+ DFGL ++ + ++ T V T Y PE + +
Sbjct: 149 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK--- 205
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
T D+++ G +LAE+++ +
Sbjct: 206 ---------GYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKMRSNKSKEF----FAELKVLCKIHHINVF-ISTFG 352
IG G +G V + + AIKK+ + + + E+K+L + H N+ I+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 353 NGSLSDHLHD-------------PLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
+ + D LLK Q L+ +G++YIH A +
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIH---SANVL 146
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SN+LL+ K+ DFGL ++ + ++ T V T Y PE + +
Sbjct: 147 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK--- 203
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
T D+++ G +LAE+++ +
Sbjct: 204 ---------GYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKMRSNKSKEF----FAELKVLCKIHHINVF-ISTFG 352
IG G +G V + + AIKK+ + + + E+K+L + H N+ I+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 353 NGSLSDHLHD-------------PLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
+ + D LLK Q L+ +G++YIH A +
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIH---SANVL 146
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SN+LL+ K+ DFGL ++ + ++ T V T Y PE + +
Sbjct: 147 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK--- 203
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
T D+++ G +LAE+++ +
Sbjct: 204 ---------GYTKSIDIWSVGCILAEMLSNR 225
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 104/272 (38%), Gaps = 64/272 (23%)
Query: 260 SQGQCKENTEDVTVLESE-----------RTIIFS-------LEEIEEATNNFDESRIIG 301
QG CK+ +++T L E +I F+ LE N F + R++G
Sbjct: 134 EQGPCKDLFQELTRLTHEYLSVAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLG 193
Query: 302 RGGFGNV---------------------YFGLLGDREAAIKKMRSNK-SKEFFAELKVLC 339
+GGFG V G+ A +K K + F L
Sbjct: 194 KGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY 253
Query: 340 KIHHINVFISTFGNGS-LSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARY 398
+ + T NG L H++ G A + G+E +H + R
Sbjct: 254 ETKDALCLVLTLMNGGDLKFHIYH---MGQAGFPEARAVFYAAEICCGLEDLH---RERI 307
Query: 399 VHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFR 458
V+RD+K NILLDD +++D GL E + + R VGT GY+ PE + +R+
Sbjct: 308 VYRDLKPENILLDDHGHIRISDLGLAV---HVPEGQTIKGR-VGTVGYMAPEVVKNERYT 363
Query: 459 FDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
F D +A G +L E+I G+
Sbjct: 364 FS-------------PDWWALGCLLYEMIAGQ 382
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKMRSNKSKEF----FAELKVLCKIHHINVF-ISTFG 352
IG G +G V + + AIKK+ + + + E+K+L + H N+ I+
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 353 NGSLSDHLHD-------------PLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
+ + D LLK Q L+ +G++YIH A +
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIH---SANVL 154
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SN+LL+ K+ DFGL ++ + ++ T V T Y PE + +
Sbjct: 155 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK--- 211
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
T D+++ G +LAE+++ +
Sbjct: 212 ---------GYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKMRSNKSKEF----FAELKVLCKIHHINVF-ISTFG 352
IG G +G V + + AIKK+ + + + E+K+L + H N+ I+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 353 NGSLSDHLHD-------------PLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
+ + D LLK Q L+ +G++YIH A +
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIH---SANVL 146
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SN+LL+ K+ DFGL ++ + ++ T V T Y PE + +
Sbjct: 147 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK--- 203
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
T D+++ G +LAE+++ +
Sbjct: 204 ---------GYTKSIDIWSVGCILAEMLSNR 225
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 98/242 (40%), Gaps = 54/242 (22%)
Query: 281 IFSLEEIEEATNNFDESRIIGRGGFGNVYFG-----LLGDREAAIKKMRSNKSK------ 329
+F +E E + R +G+G FG VY G + G+ E + N+S
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 330 EFFAELKVLCKI--HHIN-------------VFISTFGNGSLSDHL--------HDPLLK 366
EF E V+ HH+ V + +G L +L ++P
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP--- 122
Query: 367 GHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKL 426
G P T Q+A + A G+ Y++ ++VHRD+ N ++ K+ DFG+ +
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 427 EERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
T+ G G LP R+ S+ + TT +D+++FGVVL E+
Sbjct: 180 IXETDXXRK------GGKGLLP--------VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
Query: 487 IT 488
+
Sbjct: 226 TS 227
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 98/234 (41%), Gaps = 40/234 (17%)
Query: 274 LESERTIIFSLEEIEEATNNFDESRIIGRGGFGNVYFGLLGDRE--AAIKKMRSN--KSK 329
L +E S+++ E + +G G +G VY G+ A+K ++ + + +
Sbjct: 14 LGTENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE 73
Query: 330 EFFAELKVLCKIHHINV-------------FIST--FGNGSLSDHLHDPLLKGHQPLTWT 374
EF E V+ +I H N+ +I T G+L D+L + + +T
Sbjct: 74 EFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLREC---NREEVTAV 130
Query: 375 ARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKE 434
+A + +EY+ K ++HRD+ N L+ + KVADFGL +L
Sbjct: 131 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRL-------- 179
Query: 435 MLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
M G P ++ S+ + K+DV+AFGV+L E+ T
Sbjct: 180 MTGDTYTAHAGAKFP-------IKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 91/225 (40%), Gaps = 42/225 (18%)
Query: 287 IEEATNNFDESRIIGRGGFGNVYFGL---LGDREAAIKKMRSNKS----KEFFAELKVLC 339
I E + +G G +G+V G R A K R +S K + EL++L
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 340 KIHHINV--FISTFGNGSLSDHLHDPLLKGH------------QPLTWTARTQIALDAAK 385
+ H NV + F + +D L H LT + +
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILR 132
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G++YIH A +HRD+K SN+ +++ K+ DFGL R + EM T V T
Sbjct: 133 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEM--TGYVATRW 183
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y PE + + + D+++ G ++AEL+TG+
Sbjct: 184 YRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKMRSNKSKEF----FAELKVLCKIHHINVF-ISTFG 352
IG G +G V + + AIKK+ + + + E+K+L + H N+ I+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 353 NGSLSDHLHD-------------PLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
+ + D LLK Q L+ +G++YIH A +
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIH---SANVL 146
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SN+LL+ K+ DFGL ++ + ++ T V T Y PE + +
Sbjct: 147 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK--- 203
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
T D+++ G +LAE+++ +
Sbjct: 204 ---------GYTKSIDIWSVGCILAEMLSNR 225
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 40/208 (19%)
Query: 300 IGRGGFGNVYFGLLGDRE--AAIKKMRSN--KSKEFFAELKVLCKIHHINV--------- 346
+G G +G VY G+ A+K ++ + + +EF E V+ +I H N+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 347 -----FISTFGN-GSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
I+ F G+L D+L + Q ++ +A + +EY+ K ++H
Sbjct: 81 EPPFYIITEFMTYGNLLDYLREC---NRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 134
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFD 460
RD+ N L+ + KVADFGL +L M G P ++
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRL--------MTGDTYTAHAGAKFP-------IKWT 179
Query: 461 MHSSVMELQVTTKTDVFAFGVVLAELIT 488
S+ + + K+DV+AFGV+L E+ T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 49/234 (20%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIH 342
+ NF + IG G +G VY L A+KK+R + E E+ +L +++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 343 HINVF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GIE 388
H N+ I T L + LH L K + +A T I L K G+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKF---MDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 389 YIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPG 445
+ H H R +HRD+K N+L++ K+ADFGL + + RT E++ T
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------TLW 168
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
Y PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 169 YRAPEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 209
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 40/208 (19%)
Query: 300 IGRGGFGNVYFGLLGDRE--AAIKKMRSN--KSKEFFAELKVLCKIHHINV--------- 346
+G G +G VY G+ A+K ++ + + +EF E V+ +I H N+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 347 -----FISTFGN-GSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
I+ F G+L D+L + Q + +A + +EY+ K ++H
Sbjct: 82 EPPFYIITEFMTYGNLLDYLREC---NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 135
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFD 460
RD+ N L+ + KVADFGL +L M G P ++
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRL--------MTGDTYTAPAGAKFP-------IKWT 180
Query: 461 MHSSVMELQVTTKTDVFAFGVVLAELIT 488
S+ + + K+DV+AFGV+L E+ T
Sbjct: 181 APESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 98/242 (40%), Gaps = 54/242 (22%)
Query: 281 IFSLEEIEEATNNFDESRIIGRGGFGNVYFG-----LLGDREAAIKKMRSNKSK------ 329
+F +E E + R +G+G FG VY G + G+ E + N+S
Sbjct: 3 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 62
Query: 330 EFFAELKVLCKI--HHIN-------------VFISTFGNGSLSDHL--------HDPLLK 366
EF E V+ HH+ V + +G L +L ++P
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP--- 119
Query: 367 GHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKL 426
G P T Q+A + A G+ Y++ ++VHRD+ N ++ K+ DFG+ +
Sbjct: 120 GRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRD 176
Query: 427 EERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
T+ G G LP R+ S+ + TT +D+++FGVVL E+
Sbjct: 177 IXETDXXRK------GGKGLLP--------VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 222
Query: 487 IT 488
+
Sbjct: 223 TS 224
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 102/231 (44%), Gaps = 49/231 (21%)
Query: 293 NFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIHHIN 345
NF + IG G +G VY L A+KK+R + E E+ +L +++H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 346 VF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GIEYIH 391
+ I T L + LH L K + +A T I L K G+ + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKF---MDASALTGIPLPLIKSYLFQLLQGLSFCH 120
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPGYLP 448
H R +HRD+K N+L++ K+ADFGL + + RT E++ T Y
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV------TLWYRA 171
Query: 449 PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 172 PEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 209
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 49/234 (20%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIH 342
+ NF + IG G +G VY L A+KK+R + E E+ +L +++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 343 HINVF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GIE 388
H N+ I T L + LH L K + +A T I L K G+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKF---MDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 389 YIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPG 445
+ H H R +HRD+K N+L++ K+ADFGL + + RT E++ T
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------TLW 168
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
Y PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 169 YRAPEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 209
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKMRSNKSKEF----FAELKVLCKIHHINVF-ISTFG 352
IG G +G V + + AIKK+ + + + E+K+L + H N+ I+
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 353 NGSLSDHLHD-------------PLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
+ + D LLK Q L+ +G++YIH A +
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIH---SANVL 166
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SN+LL+ K+ DFGL ++ + ++ T V T Y PE + +
Sbjct: 167 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK--- 223
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
T D+++ G +LAE+++ +
Sbjct: 224 ---------GYTKSIDIWSVGCILAEMLSNR 245
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 49/234 (20%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIH 342
+ NF + IG G +G VY L A+KK+R + E E+ +L +++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 343 HINVF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GIE 388
H N+ I T L + LH L K + +A T I L K G+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKF---MDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 389 YIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPG 445
+ H H R +HRD+K N+L++ K+ADFGL + + RT E++ T
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------TLW 171
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
Y PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 172 YRAPEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 212
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 49/234 (20%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIH 342
+ NF + IG G +G VY L A+KK+R + E E+ +L +++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 343 HINVF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GIE 388
H N+ I T L + LH L K + +A T I L K G+
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKF---MDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 389 YIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPG 445
+ H H R +HRD+K N+L++ K+ADFGL + + RT E++ T
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------TLW 170
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
Y PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 171 YRAPEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 211
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 49/234 (20%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIH 342
+ NF + IG G +G VY L A+KK+R + E E+ +L +++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 343 HINVF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GIE 388
H N+ I T L + LH L K + +A T I L K G+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKF---MDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 389 YIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPG 445
+ H H R +HRD+K N+L++ K+ADFGL + + RT E++ T
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------TLW 169
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
Y PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 170 YRAPEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 210
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 40/208 (19%)
Query: 300 IGRGGFGNVYFGLLGDRE--AAIKKMRSN--KSKEFFAELKVLCKIHHINV--------- 346
+G G +G VY G+ A+K ++ + + +EF E V+ +I H N+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 347 -----FISTFGN-GSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
I+ F G+L D+L + Q ++ +A + +EY+ K ++H
Sbjct: 86 EPPFYIITEFMTYGNLLDYLREC---NRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 139
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFD 460
RD+ N L+ + KVADFGL +L M G P ++
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRL--------MTGDTYTAHAGAKFP-------IKWT 184
Query: 461 MHSSVMELQVTTKTDVFAFGVVLAELIT 488
S+ + + K+DV+AFGV+L E+ T
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 49/234 (20%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIH 342
+ NF + IG G +G VY L A+KK+R + E E+ +L +++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 343 HINVF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GIE 388
H N+ I T L + LH L K + +A T I L K G+
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKF---MDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 389 YIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPG 445
+ H H R +HRD+K N+L++ K+ADFGL + + RT E++ T
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------TLW 170
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
Y PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 171 YRAPEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 211
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 49/234 (20%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIH 342
+ NF + IG G +G VY L A+KK+R + E E+ +L +++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 343 HINVF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GIE 388
H N+ I T L + LH L K + +A T I L K G+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKF---MDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 389 YIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPG 445
+ H H R +HRD+K N+L++ K+ADFGL + + RT E++ T
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------TLW 168
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
Y PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 169 YRAPEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 209
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV---YFGLLGDREAAIKKMRSNK 327
+ ER + E I E + +G G +G+V + G R A K R +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 328 S----KEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
S K + EL++L + H NV + F + +D L H Q
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ DF L R
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLA----R 173
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 490 K 490
+
Sbjct: 220 R 220
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 102/231 (44%), Gaps = 49/231 (21%)
Query: 293 NFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIHHIN 345
NF + IG G +G VY L A+KK+R + E E+ +L +++H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 346 VF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GIEYIH 391
+ I T L + LH L K + +A T I L K G+ + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKF---MDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPGYLP 448
H R +HRD+K N+L++ K+ADFGL + + RT E++ T Y
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------TLWYRA 170
Query: 449 PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 171 PEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 208
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 49/234 (20%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIH 342
+ NF + IG G +G VY L A+KK+R + E E+ +L +++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 343 HINVF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GIE 388
H N+ I T L + LH L K + +A T I L K G+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKF---MDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 389 YIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPG 445
+ H H R +HRD+K N+L++ K+ADFGL + + RT E++ T
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------TLW 171
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
Y PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 172 YRAPEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 212
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 104/271 (38%), Gaps = 64/271 (23%)
Query: 261 QGQCKENTEDVTVLESE-----------RTIIFS-------LEEIEEATNNFDESRIIGR 302
QG CK+ +++T L E +I F+ LE N F + R++G+
Sbjct: 135 QGPCKDLFQELTRLTHEYLSVAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGK 194
Query: 303 GGFGNV---------------------YFGLLGDREAAIKKMRSNK-SKEFFAELKVLCK 340
GGFG V G+ A +K K + F L +
Sbjct: 195 GGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE 254
Query: 341 IHHINVFISTFGNGS-LSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
+ T NG L H++ G A + G+E +H + R V
Sbjct: 255 TKDALCLVLTLMNGGDLKFHIYH---MGQAGFPEARAVFYAAEICCGLEDLH---RERIV 308
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
+RD+K NILLDD +++D GL E + + R VGT GY+ PE + +R+ F
Sbjct: 309 YRDLKPENILLDDHGHIRISDLGLAV---HVPEGQTIKGR-VGTVGYMAPEVVKNERYTF 364
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
D +A G +L E+I G+
Sbjct: 365 S-------------PDWWALGCLLYEMIAGQ 382
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 100/242 (41%), Gaps = 65/242 (26%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIH 342
+ NF + IG G +G VY L A+KK+R + E E+ +L +++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 343 HINVF----------------------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIA 380
H N+ + TF + S + PL+K +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSY-----------L 112
Query: 381 LDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLA 437
+G+ + H H R +HRD+K N+L++ K+ADFGL + + RT E++
Sbjct: 113 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 438 TRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDD 497
T Y PE + ++ +T D+++ G + AE++T +RAL D
Sbjct: 169 -----TLWYRAPEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGD 210
Query: 498 SE 499
SE
Sbjct: 211 SE 212
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 102/231 (44%), Gaps = 49/231 (21%)
Query: 293 NFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIHHIN 345
NF + IG G +G VY L A+KK+R + E E+ +L +++H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 346 VF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GIEYIH 391
+ I T L +H+H L + +A T I L K G+ + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEHVHQDLKTF---MDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPGYLP 448
H R +HRD+K N+L++ K+ADFGL + + RT E++ T Y
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV------TLWYRA 170
Query: 449 PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 171 PEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 208
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 20/127 (15%)
Query: 365 LKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLV 424
++ H PL+ GI++ HD R VHRDIK NIL+D K+ DFG+
Sbjct: 102 IESHGPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIA 158
Query: 425 KLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTK-TDVFAFGVVL 483
K T+ + ++GT Y PE + + T + TD+++ G+VL
Sbjct: 159 KALSETSLTQ--TNHVLGTVQYFSPEQ--------------AKGEATDECTDIYSIGIVL 202
Query: 484 AELITGK 490
E++ G+
Sbjct: 203 YEMLVGE 209
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 27/118 (22%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKL----EERTNEKEMLATRLV 441
G++++H V+RD+K NILLD K+ADFG+ K + +TNE
Sbjct: 131 GLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNE-------FC 180
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
GTP Y+ PE + +++ HS D ++FGV+L E++ G+ D E
Sbjct: 181 GTPDYIAPEILLGQKYN---HS----------VDWWSFGVLLYEMLIGQSPFHGQDEE 225
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 102/231 (44%), Gaps = 49/231 (21%)
Query: 293 NFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIHHIN 345
NF + IG G +G VY L A+KK+R + E E+ +L +++H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 346 VF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GIEYIH 391
+ I T L + LH L K + +A T I L K G+ + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKF---MDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPGYLP 448
H R +HRD+K N+L++ K+ADFGL + + RT E++ T Y
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV------TLWYRA 171
Query: 449 PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 172 PEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 209
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 49/234 (20%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIH 342
+ NF + IG G +G VY L A+KK+R + E E+ +L +++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 343 HINVF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GIE 388
H N+ I T L + LH L K + +A T I L K G+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKF---MDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 389 YIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPG 445
+ H H R +HRD+K N+L++ K+ADFGL + + RT E++ T
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------TLW 168
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
Y PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 169 YRAPEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 209
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 102/231 (44%), Gaps = 49/231 (21%)
Query: 293 NFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIHHIN 345
NF + IG G +G VY L A+KK+R + E E+ +L +++H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 346 VF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GIEYIH 391
+ I T L + LH L K + +A T I L K G+ + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKF---MDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPGYLP 448
H R +HRD+K N+L++ K+ADFGL + + RT E++ T Y
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV------TLWYRA 170
Query: 449 PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 171 PEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 208
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 95/227 (41%), Gaps = 55/227 (24%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLLGDREA----AIKKM------RSNKSKEFFAELKVLC 339
A +F+ R +G+G FGNVY L ++++ A+K + ++ + E+++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 340 KIHHINVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQI--------ALDAAKGIEYIH 391
+ H N+ L + HD + + L + R ++ D + YI
Sbjct: 69 HLRHPNIL-------RLYGYFHDAT-RVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT 120
Query: 392 D--------HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGT 443
+ H+K R +HRDIK N+LL K+ADFG + L GT
Sbjct: 121 ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRXXLXGT 174
Query: 444 PGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
YLPPE I + MH K D+++ GV+ E + GK
Sbjct: 175 LDYLPPEMIEGR-----MHDE--------KVDLWSLGVLCYEFLVGK 208
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 48/236 (20%)
Query: 284 LEEIEEATNNFDESRIIGRGGFGNVYFGLLGDREA-----AIKKMRSNKS-----KEFFA 333
LE++ N +I+G G FG+V G L + A+K M+ + S +EF +
Sbjct: 26 LEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLS 85
Query: 334 ELKVLCKIHHINVF--------ISTFG------------NGSLSDHL-HDPLLKGHQPLT 372
E + H NV +S+ G G L +L + L G + +
Sbjct: 86 EAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIP 145
Query: 373 WTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNE 432
+ +D A G+EY+ + ++HRD+ N +L D + VADFGL K +
Sbjct: 146 LQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDY 202
Query: 433 KEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
G +P ++I ++ S+ + T+K+DV+AFGV + E+ T
Sbjct: 203 YRQ------GRIAKMPVKWIAIE--------SLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 49/234 (20%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIH 342
+ NF + IG G +G VY L A+KK+R + E E+ +L +++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 343 HINVF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GIE 388
H N+ I T L + LH L K + +A T I L K G+
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKF---MDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 389 YIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPG 445
+ H H R +HRD+K N+L++ K+ADFGL + + RT E++ T
Sbjct: 120 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------TLW 170
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
Y PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 171 YRAPEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 211
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 49/234 (20%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIH 342
+ NF + IG G +G VY L A+KK+R + E E+ +L +++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 343 HINVF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GIE 388
H N+ I T L + LH L K + +A T I L K G+
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKF---MDASALTGIPLPLIKSYLFQLLQGLA 121
Query: 389 YIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPG 445
+ H H R +HRD+K N+L++ K+ADFGL + + RT E++ T
Sbjct: 122 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------TLW 172
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
Y PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 173 YRAPEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 213
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 49/234 (20%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIH 342
+ NF + IG G +G VY L A+KK+R + E E+ +L +++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 343 HINVF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GIE 388
H N+ I T L + LH L K + +A T I L K G+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKF---MDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 389 YIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPG 445
+ H H R +HRD+K N+L++ K+ADFGL + + RT E++ T
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV------TLW 169
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
Y PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 170 YRAPEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 210
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 40/208 (19%)
Query: 300 IGRGGFGNVYFGLLGDRE--AAIKKMRSN--KSKEFFAELKVLCKIHHINV--------- 346
+G G +G VY G+ A+K ++ + + +EF E V+ +I H N+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 347 -----FISTFGN-GSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
I+ F G+L D+L + Q ++ +A + +EY+ K ++H
Sbjct: 81 EPPFYIITEFMTYGNLLDYLREC---NRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 134
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFD 460
RD+ N L+ + KVADFGL +L M G P ++
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRL--------MTGDTYTAHAGAKFP-------IKWT 179
Query: 461 MHSSVMELQVTTKTDVFAFGVVLAELIT 488
S+ + + K+DV+AFGV+L E+ T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 40/208 (19%)
Query: 300 IGRGGFGNVYFGLLGDRE--AAIKKMRSN--KSKEFFAELKVLCKIHHINV--------- 346
+G G +G VY G+ A+K ++ + + +EF E V+ +I H N+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 347 -----FISTFGN-GSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
I+ F G+L D+L + Q + +A + +EY+ K ++H
Sbjct: 83 EPPFYIITEFMTYGNLLDYLREC---NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 136
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFD 460
RD+ N L+ + KVADFGL +L M G P ++
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRL--------MTGDTYTAPAGAKFP-------IKWT 181
Query: 461 MHSSVMELQVTTKTDVFAFGVVLAELIT 488
S+ + + K+DV+AFGV+L E+ T
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 102/231 (44%), Gaps = 49/231 (21%)
Query: 293 NFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIHHIN 345
NF + IG G +G VY L A+KK+R + E E+ +L +++H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 346 VF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GIEYIH 391
+ I T L + LH L K + +A T I L K G+ + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKF---MDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPGYLP 448
H R +HRD+K N+L++ K+ADFGL + + RT E++ T Y
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV------TLWYRA 171
Query: 449 PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 172 PEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 209
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 49/234 (20%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIH 342
+ NF + IG G +G VY L A+KK+R + E E+ +L +++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 343 HINVF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GIE 388
H N+ I T L + LH L K + +A T I L K G+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKF---MDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 389 YIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPG 445
+ H H R +HRD+K N+L++ K+ADFGL + + RT E++ T
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------TLW 169
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
Y PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 170 YRAPEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 210
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 121/281 (43%), Gaps = 65/281 (23%)
Query: 298 RIIGRGGFGNVYFGLL---GDR---EAAIKKMRSNKSK----EFFAELKVLCKIHH---- 343
+++G G FG VY G+ G+ AIK + EF E ++ + H
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 344 ----------INVFISTFGNGSLSDHLHDPL--LKGHQPLTWTARTQIALDAAKGIEYIH 391
I + +G L +++H+ + L W + AKG+ Y+
Sbjct: 104 RLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYLE 157
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEY 451
+ R VHRD+ N+L+ K+ DFGL +L E +EKE A G +P ++
Sbjct: 158 ER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLE-GDEKEYNADG-----GKMPIKW 208
Query: 452 IFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT--GK-------RAL--IRDDSEP 500
+ ++ + + T ++DV+++GV + EL+T GK R + + + E
Sbjct: 209 MALECIHYR--------KFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGER 260
Query: 501 TKMKSLITI---MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ TI M V W ++ D+ RP+ +++ A S++
Sbjct: 261 LPQPPICTIDVYMVMVKCWMIDADS--RPKFKELAAEFSRM 299
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 102/231 (44%), Gaps = 49/231 (21%)
Query: 293 NFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIHHIN 345
NF + IG G +G VY L A+KK+R + E E+ +L +++H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 346 VF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GIEYIH 391
+ I T L + LH L K + +A T I L K G+ + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKF---MDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPGYLP 448
H R +HRD+K N+L++ K+ADFGL + + RT E++ T Y
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV------TLWYRA 170
Query: 449 PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 171 PEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 208
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 102/231 (44%), Gaps = 49/231 (21%)
Query: 293 NFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIHHIN 345
NF + IG G +G VY L A+KK+R + E E+ +L +++H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 346 VF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GIEYIH 391
+ I T L + LH L K + +A T I L K G+ + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKF---MDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPGYLP 448
H R +HRD+K N+L++ K+ADFGL + + RT E++ T Y
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------TLWYRA 170
Query: 449 PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 171 PEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 208
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 102/231 (44%), Gaps = 49/231 (21%)
Query: 293 NFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIHHIN 345
NF + IG G +G VY L A+KK+R + E E+ +L +++H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 346 VF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GIEYIH 391
+ I T L + LH L K + +A T I L K G+ + H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKF---MDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPGYLP 448
H R +HRD+K N+L++ K+ADFGL + + RT E++ T Y
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------TLWYRA 172
Query: 449 PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 173 PEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 210
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKMRSNKSKEF----FAELKVLCKIHHINVF-ISTFG 352
IG G +G V + + AIKK+ + + + E+K+L + H N+ I+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 353 NGSLSDHLHD-------------PLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
+ + D LLK Q L+ +G++YIH A +
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIH---SANVL 146
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SN+LL+ K+ DFGL ++ + ++ T V T Y PE + +
Sbjct: 147 HRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK--- 203
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
T D+++ G +LAE+++ +
Sbjct: 204 ---------GYTKSIDIWSVGCILAEMLSNR 225
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 87/231 (37%), Gaps = 47/231 (20%)
Query: 292 NNFDESRIIGRGGFGNV----------YFGLLGDREAAI------------KKMRSNKSK 329
N+FD +++G+G FG V Y+ + R+ I ++ N
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 330 EFFAELKVLCKIHHINVFISTFGNG-SLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIE 388
F LK + H F+ + NG L HL + T + +E
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALE 119
Query: 389 YIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLP 448
Y+H V+RDIK N++LD K+ DFGL K E ++ + GTP YL
Sbjct: 120 YLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKX-FCGTPEYLA 173
Query: 449 PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
PE + + D + GVV+ E++ G+ D E
Sbjct: 174 PEVL-------------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 40/208 (19%)
Query: 300 IGRGGFGNVYFGLLGDRE--AAIKKMRSN--KSKEFFAELKVLCKIHHINV--------- 346
+G G +G VY G+ A+K ++ + + +EF E V+ +I H N+
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 347 -----FISTFGN-GSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
I+ F G+L D+L + Q + +A + +EY+ K ++H
Sbjct: 94 EPPFYIITEFMTYGNLLDYLREC---NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 147
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFD 460
RD+ N L+ + KVADFGL +L M G P ++
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSRL--------MTGDTYTAHAGAKFP-------IKWT 192
Query: 461 MHSSVMELQVTTKTDVFAFGVVLAELIT 488
S+ + + K+DV+AFGV+L E+ T
Sbjct: 193 APESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 40/208 (19%)
Query: 300 IGRGGFGNVYFGLLGDRE--AAIKKMRSN--KSKEFFAELKVLCKIHHINV--------- 346
+G G +G VY G+ A+K ++ + + +EF E V+ +I H N+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 347 -----FISTFGN-GSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
I+ F G+L D+L + Q + +A + +EY+ K ++H
Sbjct: 83 EPPFYIITEFMTYGNLLDYLREC---NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 136
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFD 460
RD+ N L+ + KVADFGL +L M G P ++
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRL--------MTGDTYTAHAGAKFP-------IKWT 181
Query: 461 MHSSVMELQVTTKTDVFAFGVVLAELIT 488
S+ + + K+DV+AFGV+L E+ T
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 87/231 (37%), Gaps = 47/231 (20%)
Query: 292 NNFDESRIIGRGGFGNV----------YFGLLGDREAAI------------KKMRSNKSK 329
N+FD +++G+G FG V Y+ + R+ I ++ N
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 330 EFFAELKVLCKIHHINVFISTFGNG-SLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIE 388
F LK + H F+ + NG L HL + T + +E
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALE 119
Query: 389 YIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLP 448
Y+H V+RDIK N++LD K+ DFGL K E ++ + GTP YL
Sbjct: 120 YLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKX-FCGTPEYLA 173
Query: 449 PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
PE + + D + GVV+ E++ G+ D E
Sbjct: 174 PEVL-------------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 40/208 (19%)
Query: 300 IGRGGFGNVYFGLLGDRE--AAIKKMRSN--KSKEFFAELKVLCKIHHINV--------- 346
+G G +G VY G+ A+K ++ + + +EF E V+ +I H N+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 347 -----FISTFGN-GSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
I+ F G+L D+L + Q + +A + +EY+ K ++H
Sbjct: 83 EPPFYIITEFMTYGNLLDYLREC---NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 136
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFD 460
RD+ N L+ + KVADFGL +L M G P ++
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRL--------MTGDTYTAHAGAKFP-------IKWT 181
Query: 461 MHSSVMELQVTTKTDVFAFGVVLAELIT 488
S+ + + K+DV+AFGV+L E+ T
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 91/222 (40%), Gaps = 38/222 (17%)
Query: 286 EIEEATNNFDESRIIGRGGFGNVYFGLLGDRE--AAIKKMRSNKSKEF--------FAEL 335
+++ +++ +G G F VY + AIKK++ E E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 336 KVLCKIHHINV--FISTFGNGS--------LSDHLHDPLLKGHQPLTWTARTQIALDAAK 385
K+L ++ H N+ + FG+ S + L + LT + L +
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQ 123
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+EY+H H +HRD+K +N+LLD+ K+ADFGL K N V T
Sbjct: 124 GLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA---YXHQVVTRW 177
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELI 487
Y PE +F R D++A G +LAEL+
Sbjct: 178 YRAPELLFGARM------------YGVGVDMWAVGCILAELL 207
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 87/231 (37%), Gaps = 47/231 (20%)
Query: 292 NNFDESRIIGRGGFGNV----------YFGLLGDREAAI------------KKMRSNKSK 329
N+FD +++G+G FG V Y+ + R+ I ++ N
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 330 EFFAELKVLCKIHHINVFISTFGNG-SLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIE 388
F LK + H F+ + NG L HL + T + +E
Sbjct: 70 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALE 124
Query: 389 YIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLP 448
Y+H V+RDIK N++LD K+ DFGL K E ++ + GTP YL
Sbjct: 125 YLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKX-FCGTPEYLA 178
Query: 449 PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
PE + + D + GVV+ E++ G+ D E
Sbjct: 179 PEVL-------------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 216
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 40/208 (19%)
Query: 300 IGRGGFGNVYFGLLGDRE--AAIKKMRSN--KSKEFFAELKVLCKIHHINV--------- 346
+G G +G VY G+ A+K ++ + + +EF E V+ +I H N+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 347 -----FISTFGN-GSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
I+ F G+L D+L + Q + +A + +EY+ K ++H
Sbjct: 81 EPPFYIITEFMTYGNLLDYLREC---NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 134
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFD 460
RD+ N L+ + KVADFGL +L M G P ++
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRL--------MTGDTYTAHAGAKFP-------IKWT 179
Query: 461 MHSSVMELQVTTKTDVFAFGVVLAELIT 488
S+ + + K+DV+AFGV+L E+ T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 87/231 (37%), Gaps = 47/231 (20%)
Query: 292 NNFDESRIIGRGGFGNV----------YFGLLGDREAAI------------KKMRSNKSK 329
N+FD +++G+G FG V Y+ + R+ I ++ N
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 330 EFFAELKVLCKIHHINVFISTFGNG-SLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIE 388
F LK + H F+ + NG L HL + T + +E
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALE 119
Query: 389 YIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLP 448
Y+H V+RDIK N++LD K+ DFGL K E ++ + GTP YL
Sbjct: 120 YLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKX-FCGTPEYLA 173
Query: 449 PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
PE + + D + GVV+ E++ G+ D E
Sbjct: 174 PEVL-------------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
+G++YIH A +HRD+K SN+LL+ K+ DFGL ++ + ++ T V T
Sbjct: 137 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y PE + + T D+++ G +LAE+++ +
Sbjct: 194 WYRAPEIMLNSK------------GYTKSIDIWSVGCILAEMLSNR 227
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 40/208 (19%)
Query: 300 IGRGGFGNVYFGLLGDRE--AAIKKMRSN--KSKEFFAELKVLCKIHHINV--------- 346
+G G +G VY G+ A+K ++ + + +EF E V+ +I H N+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 347 -----FISTFGN-GSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
I+ F G+L D+L + Q + +A + +EY+ K ++H
Sbjct: 86 EPPFYIITEFMTYGNLLDYLREC---NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 139
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFD 460
RD+ N L+ + KVADFGL +L M G P ++
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRL--------MTGDTYTAHAGAKFP-------IKWT 184
Query: 461 MHSSVMELQVTTKTDVFAFGVVLAELIT 488
S+ + + K+DV+AFGV+L E+ T
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 40/208 (19%)
Query: 300 IGRGGFGNVYFGLLGDRE--AAIKKMRSN--KSKEFFAELKVLCKIHHINV--------- 346
+G G +G VY G+ A+K ++ + + +EF E V+ +I H N+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 347 -----FISTFGN-GSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
I+ F G+L D+L + Q + +A + +EY+ K ++H
Sbjct: 81 EPPFYIITEFMTYGNLLDYLREC---NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 134
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFD 460
RD+ N L+ + KVADFGL +L M G P ++
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRL--------MTGDTYTAHAGAKFP-------IKWT 179
Query: 461 MHSSVMELQVTTKTDVFAFGVVLAELIT 488
S+ + + K+DV+AFGV+L E+ T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 49/223 (21%)
Query: 292 NNFDESRIIGRGGFGNVYFGLLGDREAAIKKMRS----NKSKEFFAELKVLCKIHHINVF 347
N+F RIIGRGGFG VY G R+A KM + +K + + + L I +
Sbjct: 189 NDFSVHRIIGRGGFGEVY----GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS 244
Query: 348 ISTFGNGS----LSDHLHDP--------LLKG---HQPLTWT---ARTQIALDAAK---G 386
+ + G+ +S H P L+ G H L+ + + AA+ G
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+E++H+ V+RD+K +NILLD+ +++D GL ++K+ A+ VGT GY
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLAC---DFSKKKPHAS--VGTHGY 356
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ PE + K +D + D F+ G +L +L+ G
Sbjct: 357 MAPE-VLQKGVAYD-----------SSADWFSLGCMLFKLLRG 387
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 98/242 (40%), Gaps = 54/242 (22%)
Query: 281 IFSLEEIEEATNNFDESRIIGRGGFGNVYFG-----LLGDREAAIKKMRSNKSK------ 329
+F +E E + R +G+G FG VY G + G+ E + N+S
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 330 EFFAELKVLCKI--HHIN-------------VFISTFGNGSLSDHL--------HDPLLK 366
EF E V+ HH+ V + +G L +L ++P
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP--- 122
Query: 367 GHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKL 426
G P T Q+A + A G+ Y++ ++VHRD+ N ++ K+ DFG+
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGM--- 176
Query: 427 EERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
T + A G G LP R+ S+ + TT +D+++FGVVL E+
Sbjct: 177 ---TRDIYETAYYRKGGKGLLP--------VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
Query: 487 IT 488
+
Sbjct: 226 TS 227
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 49/223 (21%)
Query: 292 NNFDESRIIGRGGFGNVYFGLLGDREAAIKKMRS----NKSKEFFAELKVLCKIHHINVF 347
N+F RIIGRGGFG VY G R+A KM + +K + + + L I +
Sbjct: 189 NDFSVHRIIGRGGFGEVY----GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS 244
Query: 348 ISTFGNGS----LSDHLHDP--------LLKG---HQPLTWT---ARTQIALDAAK---G 386
+ + G+ +S H P L+ G H L+ + + AA+ G
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+E++H+ V+RD+K +NILLD+ +++D GL ++K+ A+ VGT GY
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLAC---DFSKKKPHAS--VGTHGY 356
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ PE + K +D + D F+ G +L +L+ G
Sbjct: 357 MAPE-VLQKGVAYD-----------SSADWFSLGCMLFKLLRG 387
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 19/114 (16%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G++++H V+RD+K NILLD K+ADFG+ K + K GTP
Sbjct: 130 GLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK---TNXFCGTPD 183
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
Y+ PE + +++ HS D ++FGV+L E++ G+ D E
Sbjct: 184 YIAPEILLGQKYN---HS----------VDWWSFGVLLYEMLIGQSPFHGQDEE 224
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 16/105 (15%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+H HRDIK N+LLD+ K++DFGL + R N +E L ++ GT
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLP 172
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y+ PE + + F DV++ G+VL ++ G+
Sbjct: 173 YVAPELLKRREFH------------AEPVDVWSCGIVLTAMLAGE 205
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 102/231 (44%), Gaps = 49/231 (21%)
Query: 293 NFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIHHIN 345
NF + IG G +G VY L A+KK+R + E E+ +L +++H N
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 346 VF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GIEYIH 391
+ I T L + LH L K + +A T I L K G+ + H
Sbjct: 68 IVKLLDVIHTENKLYLVFEFLHQDLKKF---MDASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPGYLP 448
H R +HRD+K N+L++ K+ADFGL + + RT E++ T Y
Sbjct: 125 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV------TLWYRA 175
Query: 449 PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 176 PEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 213
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKMRSNKSKEF----FAELKVLCKIHHINVF-ISTFG 352
IG G +G V + L AIKK+ + + + E+K+L + H N+ I+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 353 NGSLSDHLHD-------------PLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
+ + D LLK Q L+ +G++YIH A +
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIH---SANVL 150
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SN+LL+ K+ DFGL ++ + ++ V T Y PE + +
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSK--- 207
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
T D+++ G +LAE+++ +
Sbjct: 208 ---------GYTKSIDIWSVGCILAEMLSNR 229
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 40/208 (19%)
Query: 300 IGRGGFGNVYFGLLGDRE--AAIKKMRSN--KSKEFFAELKVLCKIHHINV--------- 346
+G G +G VY G+ A+K ++ + + +EF E V+ +I H N+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 347 -----FISTFGN-GSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
I+ F G+L D+L + Q + +A + +EY+ K ++H
Sbjct: 86 EPPFYIITEFMTYGNLLDYLREC---NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 139
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFD 460
RD+ N L+ + KVADFGL +L M G P ++
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRL--------MTGDTYTAHAGAKFP-------IKWT 184
Query: 461 MHSSVMELQVTTKTDVFAFGVVLAELIT 488
S+ + + K+DV+AFGV+L E+ T
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 40/208 (19%)
Query: 300 IGRGGFGNVYFGLLGDRE--AAIKKMRSN--KSKEFFAELKVLCKIHHINV--------- 346
+G G +G VY G+ A+K ++ + + +EF E V+ +I H N+
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 347 -----FISTFGN-GSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
I+ F G+L D+L + Q + +A + +EY+ K ++H
Sbjct: 85 EPPFYIITEFMTYGNLLDYLREC---NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 138
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFD 460
RD+ N L+ + KVADFGL +L M G P ++
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRL--------MTGDTYTAHAGAKFP-------IKWT 183
Query: 461 MHSSVMELQVTTKTDVFAFGVVLAELIT 488
S+ + + K+DV+AFGV+L E+ T
Sbjct: 184 APESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKMRSNKSKEF----FAELKVLCKIHHINVF-ISTFG 352
IG G +G V + L AIKK+ + + + E+K+L + H N+ I+
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 353 NGSLSDHLHD-------------PLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
+ + D LLK Q L+ +G++YIH A +
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIH---SANVL 151
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SN+LL+ K+ DFGL ++ + ++ V T Y PE + +
Sbjct: 152 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSK--- 208
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
T D+++ G +LAE+++ +
Sbjct: 209 ---------GYTKSIDIWSVGCILAEMLSNR 230
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 39/171 (22%)
Query: 292 NNFDESRIIGRGGFGNVY--FGLLGDREAAIKKMRSNKSK--EFFAELKVLCKIHHINV- 346
++F+E ++G+G FG V L R AIKK+R + K +E+ +L ++H V
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 347 -----------FISTFG----------------NGSLSDHLHDPLLKGHQPLTWTARTQI 379
F+ NG+L D +H L + W QI
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQI 125
Query: 380 ALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERT 430
+ + YIH +HRD+K NI +D+ K+ DFGL K R+
Sbjct: 126 L----EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 16/105 (15%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+H HRDIK N+LLD+ K++DFGL + R N +E L ++ GT
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLP 171
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y+ PE + + F DV++ G+VL ++ G+
Sbjct: 172 YVAPELLKRREFH------------AEPVDVWSCGIVLTAMLAGE 204
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 45/242 (18%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDRE--AAIKKMRSNKSKEFFAELKVLCKIHHINVF--- 347
++ ++++IG G FG VY L D AIKK+ K+ + EL+++ K+ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-NRELQIMRKLDHCNIVRLR 79
Query: 348 ISTFGNGSLSDHLHDPLLKGHQPLT------WTARTQIALDAA----------KGIEYIH 391
+ +G D ++ L+ + P T +R + L + + YIH
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 392 DHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEK-EMLATRLVGTPGYLPP 449
HRDIK N+LLD D K+ DFG K R + +R Y P
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAP 191
Query: 450 EYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSLITI 509
E IF T+ DV++ G VLAEL+ G+ + DS ++ +I +
Sbjct: 192 ELIF------------GATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKV 238
Query: 510 MA 511
+
Sbjct: 239 LG 240
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 105/247 (42%), Gaps = 64/247 (25%)
Query: 288 EEATNNFDESRIIGRGGFGNV-------YFGLLGDREAAIKKMRSNKS----KEFFAELK 336
E N + +G G FG V G G A+K ++ N S ++ +E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 337 VLCKIHHINVFISTFGN----------------GSLSDHLHDPLLKG------------- 367
VL +++H +V I +G GSL L + G
Sbjct: 79 VLKQVNHPHV-IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSS 137
Query: 368 ------HQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADF 421
+ LT A ++G++Y+ + + VHRD+ NIL+ +G + K++DF
Sbjct: 138 SLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDF 194
Query: 422 GLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGV 481
GL + E++ R + G +P +++ ++ S+ + TT++DV++FGV
Sbjct: 195 GLSR---DVYEEDSYVKR---SQGRIPVKWMAIE--------SLFDHIYTTQSDVWSFGV 240
Query: 482 VLAELIT 488
+L E++T
Sbjct: 241 LLWEIVT 247
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 54/225 (24%)
Query: 298 RIIGRGGFGNVYFG-----LLGDREAAIKKMRSNKSK------EFFAELKVLCKI--HHI 344
R +G+G FG VY G + G+ E + N+S EF E V+ HH+
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 345 N-------------VFISTFGNGSLSDHL--------HDPLLKGHQPLTWTARTQIALDA 383
V + +G L +L ++P G P T Q+A +
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP---GRPPPTLQEMIQMAAEI 139
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGT 443
A G+ Y++ ++VHRD+ N ++ K+ DFG+ + T+ G
Sbjct: 140 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRK------GG 190
Query: 444 PGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
G LP R+ S+ + TT +D+++FGVVL E+ +
Sbjct: 191 KGLLP--------VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 105/247 (42%), Gaps = 64/247 (25%)
Query: 288 EEATNNFDESRIIGRGGFGNV-------YFGLLGDREAAIKKMRSNKS----KEFFAELK 336
E N + +G G FG V G G A+K ++ N S ++ +E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 337 VLCKIHHINVFISTFGN----------------GSLSDHLHDPLLKG------------- 367
VL +++H +V I +G GSL L + G
Sbjct: 79 VLKQVNHPHV-IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSS 137
Query: 368 ------HQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADF 421
+ LT A ++G++Y+ + + VHRD+ NIL+ +G + K++DF
Sbjct: 138 SLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDF 194
Query: 422 GLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGV 481
GL + E++ R + G +P +++ ++ S+ + TT++DV++FGV
Sbjct: 195 GLSR---DVYEEDSXVKR---SQGRIPVKWMAIE--------SLFDHIYTTQSDVWSFGV 240
Query: 482 VLAELIT 488
+L E++T
Sbjct: 241 LLWEIVT 247
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+H HRDIK N+LLD+ K++DFGL + R N +E L ++ GT
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLP 172
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y+ PE +KR F H+ DV++ G+VL ++ G+
Sbjct: 173 YVAPE--LLKRREF--HAE--------PVDVWSCGIVLTAMLAGE 205
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 40/208 (19%)
Query: 300 IGRGGFGNVYFGLLGDRE--AAIKKMRSN--KSKEFFAELKVLCKIHHINV--------- 346
+G G +G VY G+ A+K ++ + + +EF E V+ +I H N+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 347 -----FISTFGN-GSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
I+ F G+L D+L + Q + +A + +EY+ K ++H
Sbjct: 86 EPPFYIITEFMTYGNLLDYLREC---NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 139
Query: 401 RDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFD 460
RD+ N L+ + KVADFGL +L M G P ++
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRL--------MTGDTXTAHAGAKFP-------IKWT 184
Query: 461 MHSSVMELQVTTKTDVFAFGVVLAELIT 488
S+ + + K+DV+AFGV+L E+ T
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+H HRDIK N+LLD+ K++DFGL + R N +E L ++ GT
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLP 172
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y+ PE +KR F H+ DV++ G+VL ++ G+
Sbjct: 173 YVAPE--LLKRREF--HAE--------PVDVWSCGIVLTAMLAGE 205
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+H HRDIK N+LLD+ K++DFGL + R N +E L ++ GT
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLP 171
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y+ PE +KR F H+ DV++ G+VL ++ G+
Sbjct: 172 YVAPE--LLKRREF--HAE--------PVDVWSCGIVLTAMLAGE 204
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+H HRDIK N+LLD+ K++DFGL + R N +E L ++ GT
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLP 172
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y+ PE +KR F H+ DV++ G+VL ++ G+
Sbjct: 173 YVAPE--LLKRREF--HAE--------PVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+H HRDIK N+LLD+ K++DFGL + R N +E L ++ GT
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLP 172
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y+ PE +KR F H+ DV++ G+VL ++ G+
Sbjct: 173 YVAPE--LLKRREF--HAE--------PVDVWSCGIVLTAMLAGE 205
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+H HRDIK N+LLD+ K++DFGL + R N +E L ++ GT
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLP 171
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y+ PE +KR F H+ DV++ G+VL ++ G+
Sbjct: 172 YVAPE--LLKRREF--HAE--------PVDVWSCGIVLTAMLAGE 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+H HRDIK N+LLD+ K++DFGL + R N +E L ++ GT
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLP 172
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y+ PE +KR F H+ DV++ G+VL ++ G+
Sbjct: 173 YVAPE--LLKRREF--HAE--------PVDVWSCGIVLTAMLAGE 205
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+H HRDIK N+LLD+ K++DFGL + R N +E L ++ GT
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLP 171
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y+ PE +KR F H+ DV++ G+VL ++ G+
Sbjct: 172 YVAPE--LLKRREF--HAE--------PVDVWSCGIVLTAMLAGE 204
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 96/241 (39%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-- 326
+ ER + E I E + +G G +G+V F A+KK+
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 327 ---KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
+K + EL++L + H NV + F + +D L H Q
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ FGL R
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLA----R 173
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 490 K 490
+
Sbjct: 220 R 220
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+H HRDIK N+LLD+ K++DFGL + R N +E L ++ GT
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLP 171
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y+ PE +KR F H+ DV++ G+VL ++ G+
Sbjct: 172 YVAPE--LLKRREF--HAE--------PVDVWSCGIVLTAMLAGE 204
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+H HRDIK N+LLD+ K++DFGL + R N +E L ++ GT
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLP 171
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y+ PE +KR F H+ DV++ G+VL ++ G+
Sbjct: 172 YVAPE--LLKRREF--HAE--------PVDVWSCGIVLTAMLAGE 204
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+H HRDIK N+LLD+ K++DFGL + R N +E L ++ GT
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLP 171
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y+ PE +KR F H+ DV++ G+VL ++ G+
Sbjct: 172 YVAPE--LLKRREF--HAE--------PVDVWSCGIVLTAMLAGE 204
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 49/223 (21%)
Query: 292 NNFDESRIIGRGGFGNVYFGLLGDREAAIKKMRS----NKSKEFFAELKVLCKIHHINVF 347
N+F RIIGRGGFG VY G R+A KM + +K + + + L I +
Sbjct: 189 NDFSVHRIIGRGGFGEVY----GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS 244
Query: 348 ISTFGNGS----LSDHLHDP--------LLKG---HQPLTWT---ARTQIALDAAK---G 386
+ + G+ +S H P L+ G H L+ + + AA+ G
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+E++H+ V+RD+K +NILLD+ +++D GL ++K+ A+ VGT GY
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLAC---DFSKKKPHAS--VGTHGY 356
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ PE + K +D + D F+ G +L +L+ G
Sbjct: 357 MAPE-VLQKGVAYD-----------SSADWFSLGCMLFKLLRG 387
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 49/223 (21%)
Query: 292 NNFDESRIIGRGGFGNVYFGLLGDREAAIKKMRS----NKSKEFFAELKVLCKIHHINVF 347
N+F RIIGRGGFG VY G R+A KM + +K + + + L I +
Sbjct: 188 NDFSVHRIIGRGGFGEVY----GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS 243
Query: 348 ISTFGNGS----LSDHLHDP--------LLKG---HQPLTWT---ARTQIALDAAK---G 386
+ + G+ +S H P L+ G H L+ + + AA+ G
Sbjct: 244 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 303
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+E++H+ V+RD+K +NILLD+ +++D GL ++K+ A+ VGT GY
Sbjct: 304 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLAC---DFSKKKPHAS--VGTHGY 355
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ PE + K +D + D F+ G +L +L+ G
Sbjct: 356 MAPE-VLQKGVAYD-----------SSADWFSLGCMLFKLLRG 386
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 89/213 (41%), Gaps = 45/213 (21%)
Query: 300 IGRGGFGNVYFGL--LGDREAAIKKMRSNKSKEFFA-----ELKVLCKIHHINV--FIST 350
+G G +G+V + + AIKK+ E FA EL +L + H NV +
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 351 FGNGSLSDHLHDPLLKGHQPLTWTARTQI-------------ALDAAKGIEYIHDHTKAR 397
F S + +D L P T +I KG++YIH A
Sbjct: 110 FTPASSLRNFYDFYLV--MPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHS---AG 164
Query: 398 YVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRF 457
VHRD+K N+ +++ K+ DFGL R + EM T V T Y PE I
Sbjct: 165 VVHRDLKPGNLAVNEDCELKILDFGLA----RHADAEM--TGYVVTRWYRAPEVIL---- 214
Query: 458 RFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
S M T D+++ G ++AE++TGK
Sbjct: 215 ------SWMHYNQT--VDIWSVGCIMAEMLTGK 239
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 89/213 (41%), Gaps = 45/213 (21%)
Query: 300 IGRGGFGNVYFGL--LGDREAAIKKMRSNKSKEFFA-----ELKVLCKIHHINV--FIST 350
+G G +G+V + + AIKK+ E FA EL +L + H NV +
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 351 FGNGSLSDHLHDPLLKGHQPLTWTARTQI-------------ALDAAKGIEYIHDHTKAR 397
F S + +D L P T +I KG++YIH A
Sbjct: 92 FTPASSLRNFYDFYLV--MPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHS---AG 146
Query: 398 YVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRF 457
VHRD+K N+ +++ K+ DFGL R + EM T V T Y PE I
Sbjct: 147 VVHRDLKPGNLAVNEDCELKILDFGLA----RHADAEM--TGYVVTRWYRAPEVIL---- 196
Query: 458 RFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
S M T D+++ G ++AE++TGK
Sbjct: 197 ------SWMHYNQT--VDIWSVGCIMAEMLTGK 221
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+H HRDIK N+LLD+ K++DFGL + R N +E L ++ GT
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLP 172
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y+ PE +KR F H+ DV++ G+VL ++ G+
Sbjct: 173 YVAPE--LLKRREF--HAE--------PVDVWSCGIVLTAMLAGE 205
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+H HRDIK N+LLD+ K++DFGL + R N +E L ++ GT
Sbjct: 115 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLP 170
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y+ PE +KR F H+ DV++ G+VL ++ G+
Sbjct: 171 YVAPE--LLKRREF--HAE--------PVDVWSCGIVLTAMLAGE 203
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+H HRDIK N+LLD+ K++DFGL + R N +E L ++ GT
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLP 171
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y+ PE +KR F H+ DV++ G+VL ++ G+
Sbjct: 172 YVAPE--LLKRREF--HAE--------PVDVWSCGIVLTAMLAGE 204
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+H HRDIK N+LLD+ K++DFGL + R N +E L ++ GT
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMXGTLP 171
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y+ PE +KR F H+ DV++ G+VL ++ G+
Sbjct: 172 YVAPE--LLKRREF--HAE--------PVDVWSCGIVLTAMLAGE 204
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 91/218 (41%), Gaps = 44/218 (20%)
Query: 293 NFDESRIIGRGGFGNVYFG--LLGDREAAIK-----KMRSNKSKEFFAELKVLCKIHHIN 345
N+ + IG+G F V +L RE A+K ++ ++ F E++++ ++H N
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 346 V--------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
+ + + +G + D L+ + AR + ++Y H
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGG---EVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH 131
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEY 451
+ VHRD+K N+LLD + K+ADFG N+ + G+P Y PE
Sbjct: 132 ---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC----GSPPYAAPEL 184
Query: 452 IFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
K++ + DV++ GV+L L++G
Sbjct: 185 FQGKKYD------------GPEVDVWSLGVILYTLVSG 210
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+H HRDIK N+LLD+ K++DFGL + R N +E L ++ GT
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMXGTLP 171
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y+ PE +KR F H+ DV++ G+VL ++ G+
Sbjct: 172 YVAPE--LLKRREF--HAE--------PVDVWSCGIVLTAMLAGE 204
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 96/241 (39%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-- 326
+ ER + E I E + +G G +G+V F A+KK+
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 327 ---KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
+K + EL++L + H NV + F + +D L H Q
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ D GL R
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLA----R 173
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 490 K 490
+
Sbjct: 220 R 220
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
+G++YIH A +HRD+K SN+LL+ K+ DFGL ++ + ++ T V T
Sbjct: 137 RGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y PE + + T D+++ G +LAE+++ +
Sbjct: 194 WYRAPEIMLNSK------------GYTKSIDIWSVGCILAEMLSNR 227
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 96/241 (39%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-- 326
+ ER + E I E + +G G +G+V F A+KK+
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 327 ---KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
+K + EL++L + H NV + F + +D L H Q
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ D GL R
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLA----R 173
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 490 K 490
+
Sbjct: 220 R 220
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 98/242 (40%), Gaps = 54/242 (22%)
Query: 281 IFSLEEIEEATNNFDESRIIGRGGFGNVYFG-----LLGDREAAIKKMRSNKSK------ 329
+F +E E + R +G+G FG VY G + G+ E + N+S
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 330 EFFAELKVLCKI--HHIN-------------VFISTFGNGSLSDHL--------HDPLLK 366
EF E V+ HH+ V + +G L +L ++P
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP--- 122
Query: 367 GHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKL 426
G P T Q+A + A G+ Y++ ++VHRD+ N ++ K+ DFG+ +
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 427 EERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
T+ G G LP R+ S+ + TT +D+++FGVVL E+
Sbjct: 180 IYETDYYRK------GGKGLLP--------VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
Query: 487 IT 488
+
Sbjct: 226 TS 227
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 119/281 (42%), Gaps = 65/281 (23%)
Query: 298 RIIGRGGFGNVYFGLLGDR------EAAIKKMRSNKSK----EFFAELKVLCKIHH---- 343
+++G G FG VY G+ AIK + EF E ++ + H
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 344 ----------INVFISTFGNGSLSDHLHDPL--LKGHQPLTWTARTQIALDAAKGIEYIH 391
I + +G L +++H+ + L W + AKG+ Y+
Sbjct: 81 RLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYLE 134
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEY 451
+ R VHRD+ N+L+ K+ DFGL +L E +EKE A G +P ++
Sbjct: 135 ER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLE-GDEKEYNADG-----GKMPIKW 185
Query: 452 IFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT--GK-------RAL--IRDDSEP 500
+ ++ + + T ++DV+++GV + EL+T GK R + + + E
Sbjct: 186 MALECIHYR--------KFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGER 237
Query: 501 TKMKSLITI---MAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
+ TI M V W ++ D+ RP+ +++ A S++
Sbjct: 238 LPQPPICTIDVYMVMVKCWMIDADS--RPKFKELAAEFSRM 276
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 45/242 (18%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDRE--AAIKKMRSNKSKEFFAELKVLCKIHHINVF--- 347
++ ++++IG G FG VY L D AIKK+ K+ + EL+++ K+ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-NRELQIMRKLDHCNIVRLR 79
Query: 348 ISTFGNGSLSDHLHDPLLKGHQPLT------WTARTQIALDAA----------KGIEYIH 391
+ +G D ++ L+ + P T +R + L + + YIH
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 392 DHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEK-EMLATRLVGTPGYLPP 449
HRDIK N+LLD D K+ DFG K R + +R Y P
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 191
Query: 450 EYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSLITI 509
E IF T+ DV++ G VLAEL+ G+ + DS ++ +I +
Sbjct: 192 ELIF------------GATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKV 238
Query: 510 MA 511
+
Sbjct: 239 LG 240
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+H HRDIK N+LLD+ K++DFGL + R N +E L ++ GT
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMXGTLP 171
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y+ PE +KR F H+ DV++ G+VL ++ G+
Sbjct: 172 YVAPE--LLKRREF--HAE--------PVDVWSCGIVLTAMLAGE 204
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+H HRDIK N+LLD+ K++DFGL + R N +E L ++ GT
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMXGTLP 171
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y+ PE +KR F H+ DV++ G+VL ++ G+
Sbjct: 172 YVAPE--LLKRREF--HAE--------PVDVWSCGIVLTAMLAGE 204
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 103/234 (44%), Gaps = 49/234 (20%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIH 342
+ NF + IG G +G VY L A+KK+R + E E+ +L +++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 343 HINVF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GIE 388
H N+ I T L +H+ L K + +A T I L K G+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDLKKF---MDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 389 YIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPG 445
+ H H R +HRD+K N+L++ K+ADFGL + + RT E++ T
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------TLW 171
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
Y PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 172 YRAPEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 212
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 44/221 (19%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDRE--AAIKKMRSNKSKEFFAELKVLCKIHHINVF--- 347
++ ++++IG G FG VY L D AIKK+ +K + EL+++ K+ H N+
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-NRELQIMRKLDHCNIVRLR 107
Query: 348 ISTFGNGSLSDHLHDPLLKGHQPLT------WTARTQIALDAA----------KGIEYIH 391
+ +G D ++ L+ + P T +R + L + + YIH
Sbjct: 108 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 167
Query: 392 DHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEK-EMLATRLVGTPGYLPP 449
HRDIK N+LLD D K+ DFG K R + +R Y P
Sbjct: 168 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 219
Query: 450 EYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
E IF T+ DV++ G VLAEL+ G+
Sbjct: 220 ELIF------------GATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 51/235 (21%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIH 342
+ NF + IG G +G VY L A+KK+R + E E+ +L +++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 343 HINV--------------FISTFGNGSLSDHLHDPLLKG-HQPLTWTARTQIALDAAKGI 387
H N+ + F + L + L G PL + Q+ +G+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLL----QGL 117
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTP 444
+ H H R +HRD+K N+L++ K+ADFGL + + RT E++ T
Sbjct: 118 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------TL 168
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
Y PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 169 WYRAPEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 210
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+ Y+H HRDIK N+LLD+ K++DFGL + R N +E L ++ GT
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMXGTLP 172
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y+ PE +KR F H+ DV++ G+VL ++ G+
Sbjct: 173 YVAPE--LLKRREF--HAE--------PVDVWSCGIVLTAMLAGE 205
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 51/235 (21%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIH 342
+ NF + IG G +G VY L A+KK+R + E E+ +L +++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 343 HINV--------------FISTFGNGSLSDHLHDPLLKG-HQPLTWTARTQIALDAAKGI 387
H N+ + F + L + L G PL + Q+ +G+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLL----QGL 119
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTP 444
+ H H R +HRD+K N+L++ K+ADFGL + + RT E++ T
Sbjct: 120 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------TL 170
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
Y PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 171 WYRAPEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 212
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 106/234 (45%), Gaps = 40/234 (17%)
Query: 287 IEEATNNFDESRIIGRGGFGNVY------FGLLGDREAAIKKMRSNKSKEFFAELKVL-- 338
+E ++F++ +G G G V+ GL+ R+ +++ + EL+VL
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 339 CKIHHINVFISTF-GNGSLS---DHLH----DPLLKGHQPLTWTARTQIALDAAKGIEYI 390
C +I F F +G +S +H+ D +LK + ++++ KG+ Y+
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 391 HDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPE 450
+ K + +HRD+K SNIL++ K+ DFG+ + +A VGT Y+ PE
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPE 173
Query: 451 YIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRAL----IRDDSEP 500
+ + + ++D+++ G+ L E+ G+ + ++DS P
Sbjct: 174 RLQGTHY-------------SVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRP 214
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 45/242 (18%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDRE--AAIKKMRSNKSKEFFAELKVLCKIHHINVF--- 347
++ ++++IG G FG VY L D AIKK+ +K + EL+++ K+ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-NRELQIMRKLDHCNIVRLR 79
Query: 348 ISTFGNGSLSDHLHDPLLKGHQPLT------WTARTQIALDAA----------KGIEYIH 391
+ +G D ++ L+ + P T +R + L + + YIH
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 392 DHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEK-EMLATRLVGTPGYLPP 449
HRDIK N+LLD D K+ DFG K R + +R Y P
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 191
Query: 450 EYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSLITI 509
E IF T+ DV++ G VLAEL+ G+ + DS ++ +I +
Sbjct: 192 ELIF------------GATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKV 238
Query: 510 MA 511
+
Sbjct: 239 LG 240
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 45/242 (18%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDRE--AAIKKMRSNKSKEFFAELKVLCKIHHINVF--- 347
++ ++++IG G FG VY L D AIKK+ +K + EL+++ K+ H N+
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-NRELQIMRKLDHCNIVRLR 84
Query: 348 ISTFGNGSLSDHLHDPLLKGHQPLT------WTARTQIALDAA----------KGIEYIH 391
+ +G D ++ L+ + P T +R + L + + YIH
Sbjct: 85 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 144
Query: 392 DHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEK-EMLATRLVGTPGYLPP 449
HRDIK N+LLD D K+ DFG K R + +R Y P
Sbjct: 145 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 196
Query: 450 EYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSLITI 509
E IF T+ DV++ G VLAEL+ G+ + DS ++ +I +
Sbjct: 197 ELIF------------GATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKV 243
Query: 510 MA 511
+
Sbjct: 244 LG 245
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 45/242 (18%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDRE--AAIKKMRSNKSKEFFAELKVLCKIHHINVF--- 347
++ ++++IG G FG VY L D AIKK+ +K + EL+++ K+ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-NRELQIMRKLDHCNIVRLR 79
Query: 348 ISTFGNGSLSDHLHDPLLKGHQPLT------WTARTQIALDAA----------KGIEYIH 391
+ +G D ++ L+ + P T +R + L + + YIH
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 392 DHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEK-EMLATRLVGTPGYLPP 449
HRDIK N+LLD D K+ DFG K R + +R Y P
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAP 191
Query: 450 EYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSLITI 509
E IF T+ DV++ G VLAEL+ G+ + DS ++ +I +
Sbjct: 192 ELIF------------GATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKV 238
Query: 510 MA 511
+
Sbjct: 239 LG 240
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 45/242 (18%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDRE--AAIKKMRSNKSKEFFAELKVLCKIHHINVF--- 347
++ ++++IG G FG VY L D AIKK+ K+ + EL+++ K+ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-NRELQIMRKLDHCNIVRLR 79
Query: 348 ISTFGNGSLSDHLHDPLLKGHQPLT------WTARTQIALDAA----------KGIEYIH 391
+ +G D ++ L+ + P T +R + L + + YIH
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 392 DHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEK-EMLATRLVGTPGYLPP 449
HRDIK N+LLD D K+ DFG K R + +R Y P
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 191
Query: 450 EYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSLITI 509
E IF T+ DV++ G VLAEL+ G+ + DS ++ +I +
Sbjct: 192 ELIF------------GATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKV 238
Query: 510 MA 511
+
Sbjct: 239 LG 240
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 44/221 (19%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDRE--AAIKKMRSNKSKEFFAELKVLCKIHHINVF--- 347
++ ++++IG G FG VY L D AIKK+ +K + EL+++ K+ H N+
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-NRELQIMRKLDHCNIVRLR 115
Query: 348 ISTFGNGSLSDHLHDPLLKGHQPLT------WTARTQIALDAA----------KGIEYIH 391
+ +G D ++ L+ + P T +R + L + + YIH
Sbjct: 116 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 175
Query: 392 DHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEK-EMLATRLVGTPGYLPP 449
HRDIK N+LLD D K+ DFG K R + +R Y P
Sbjct: 176 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 227
Query: 450 EYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
E IF T+ DV++ G VLAEL+ G+
Sbjct: 228 ELIF------------GATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 44/221 (19%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDRE--AAIKKMRSNKSKEFFAELKVLCKIHHINVF--- 347
++ ++++IG G FG VY L D AIKK+ +K + EL+++ K+ H N+
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-NRELQIMRKLDHCNIVRLR 113
Query: 348 ISTFGNGSLSDHLHDPLLKGHQPLT------WTARTQIALDAA----------KGIEYIH 391
+ +G D ++ L+ + P T +R + L + + YIH
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 392 DHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEK-EMLATRLVGTPGYLPP 449
HRDIK N+LLD D K+ DFG K R + +R Y P
Sbjct: 174 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 225
Query: 450 EYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
E IF T+ DV++ G VLAEL+ G+
Sbjct: 226 ELIF------------GATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 44/221 (19%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDRE--AAIKKMRSNKSKEFFAELKVLCKIHHINVF--- 347
++ ++++IG G FG VY L D AIKK+ +K + EL+++ K+ H N+
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-NRELQIMRKLDHCNIVRLR 113
Query: 348 ISTFGNGSLSDHLHDPLLKGHQPLT------WTARTQIALDAA----------KGIEYIH 391
+ +G D ++ L+ + P T +R + L + + YIH
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 392 DHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEK-EMLATRLVGTPGYLPP 449
HRDIK N+LLD D K+ DFG K R + +R Y P
Sbjct: 174 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAP 225
Query: 450 EYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
E IF T+ DV++ G VLAEL+ G+
Sbjct: 226 ELIF------------GATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 44/221 (19%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDRE--AAIKKMRSNKSKEFFAELKVLCKIHHINVF--- 347
++ ++++IG G FG VY L D AIKK+ +K + EL+++ K+ H N+
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-NRELQIMRKLDHCNIVRLR 98
Query: 348 ISTFGNGSLSDHLHDPLLKGHQPLT------WTARTQIALDAA----------KGIEYIH 391
+ +G D ++ L+ + P T +R + L + + YIH
Sbjct: 99 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 158
Query: 392 DHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEK-EMLATRLVGTPGYLPP 449
HRDIK N+LLD D K+ DFG K R + +R Y P
Sbjct: 159 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAP 210
Query: 450 EYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
E IF T+ DV++ G VLAEL+ G+
Sbjct: 211 ELIF------------GATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 45/242 (18%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDRE--AAIKKMRSNKSKEFFAELKVLCKIHHINVF--- 347
++ ++++IG G FG VY L D AIKK+ +K + EL+++ K+ H N+
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-NRELQIMRKLDHCNIVRLR 117
Query: 348 ISTFGNGSLSDHLHDPLLKGHQPLT------WTARTQIALDAA----------KGIEYIH 391
+ +G D ++ L+ + P T +R + L + + YIH
Sbjct: 118 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 177
Query: 392 DHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEK-EMLATRLVGTPGYLPP 449
HRDIK N+LLD D K+ DFG K R + +R Y P
Sbjct: 178 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 229
Query: 450 EYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSLITI 509
E IF T+ DV++ G VLAEL+ G+ + DS ++ +I +
Sbjct: 230 ELIF------------GATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKV 276
Query: 510 MA 511
+
Sbjct: 277 LG 278
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 45/242 (18%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDRE--AAIKKMRSNKSKEFFAELKVLCKIHHINVF--- 347
++ ++++IG G FG VY L D AIKK+ +K + EL+++ K+ H N+
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-NRELQIMRKLDHCNIVRLR 92
Query: 348 ISTFGNGSLSDHLHDPLLKGHQPLT------WTARTQIALDAA----------KGIEYIH 391
+ +G D ++ L+ + P T +R + L + + YIH
Sbjct: 93 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 152
Query: 392 DHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEK-EMLATRLVGTPGYLPP 449
HRDIK N+LLD D K+ DFG K R + +R Y P
Sbjct: 153 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 204
Query: 450 EYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSLITI 509
E IF T+ DV++ G VLAEL+ G+ + DS ++ +I +
Sbjct: 205 ELIF------------GATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKV 251
Query: 510 MA 511
+
Sbjct: 252 LG 253
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 399 VHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFR 458
+HRD+K +N+ LD K+ DFGL ++ N E A VGTP Y+ PE
Sbjct: 138 LHRDLKPANVFLDGKQNVKLGDFGLARI---LNHDEDFAKEFVGTPYYMSPE-------- 186
Query: 459 FDMHSSVMELQVTTKTDVFAFGVVLAEL 486
+ + K+D+++ G +L EL
Sbjct: 187 -----QMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 45/242 (18%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDRE--AAIKKMRSNKSKEFFAELKVLCKIHHINVF--- 347
++ ++++IG G FG VY L D AIKK+ +K + EL+++ K+ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-NRELQIMRKLDHCNIVRLR 79
Query: 348 ISTFGNGSLSDHLHDPLLKGHQPLT------WTARTQIALDAA----------KGIEYIH 391
+ +G D ++ L+ + P T +R + L + + YIH
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 392 DHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEK-EMLATRLVGTPGYLPP 449
HRDIK N+LLD D K+ DFG K R + +R Y P
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAP 191
Query: 450 EYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSLITI 509
E IF T+ DV++ G VLAEL+ G+ + DS ++ +I +
Sbjct: 192 ELIF------------GATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKV 238
Query: 510 MA 511
+
Sbjct: 239 LG 240
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 31/156 (19%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
++Y H H VHRD+K N+LLD + AK+ADFGL + ++ E L G+P Y
Sbjct: 124 VDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNM---MSDGEFLRDS-CGSPNY 176
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSL 506
PE I + L + D+++ GV+L L+ G D+ PT K +
Sbjct: 177 AAPEVISGR------------LYAGPEVDIWSCGVILYALLCGTLPF-DDEHVPTLFKKI 223
Query: 507 ITIMAAVAEWC-----------LNEDAVDRPEMRDI 531
+ + E+ L D + R ++DI
Sbjct: 224 RGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 105/255 (41%), Gaps = 40/255 (15%)
Query: 274 LESERTIIFSLEEIEEATNNFDESRIIGRGGF-----------GNVYFGLLGDREAAIKK 322
L+ I+ L+E+ ++F+ ++IGRG F G VY + ++ +K+
Sbjct: 43 LQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKR 102
Query: 323 -----MRSNKSKEFFAELKVLCKIH-------HINVFISTFGNGSLSDHLHDPLLKGHQP 370
R + + + + ++H ++ + + + G L L G +
Sbjct: 103 GEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSK---FGERI 159
Query: 371 LTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFG-LVKLEER 429
AR +A + I+ +H + YVHRDIK NILLD ++ADFG +KL
Sbjct: 160 PAEMARFYLA-EIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRAD 215
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ ++A VGTP YL PE + + + D +A GV E+ G
Sbjct: 216 GTVRSLVA---VGTPDYLSPEILQA------VGGGPGTGSYGPECDWWALGVFAYEMFYG 266
Query: 490 KRALIRDDSEPTKMK 504
+ D + T K
Sbjct: 267 QTPFYADSTAETYGK 281
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 45/242 (18%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDRE--AAIKKMRSNKSKEFFAELKVLCKIHHINVF--- 347
++ ++++IG G FG VY L D AIKK+ +K + EL+++ K+ H N+
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-NRELQIMRKLDHCNIVRLR 83
Query: 348 ISTFGNGSLSDHLHDPLLKGHQPLT------WTARTQIALDAA----------KGIEYIH 391
+ +G D ++ L+ + P T +R + L + + YIH
Sbjct: 84 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 143
Query: 392 DHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEK-EMLATRLVGTPGYLPP 449
HRDIK N+LLD D K+ DFG K R + +R Y P
Sbjct: 144 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAP 195
Query: 450 EYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSLITI 509
E IF T+ DV++ G VLAEL+ G+ + DS ++ +I +
Sbjct: 196 ELIF------------GATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKV 242
Query: 510 MA 511
+
Sbjct: 243 LG 244
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 105/247 (42%), Gaps = 64/247 (25%)
Query: 288 EEATNNFDESRIIGRGGFGNV-------YFGLLGDREAAIKKMRSNKS----KEFFAELK 336
E N + +G G FG V G G A+K ++ N S ++ +E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 337 VLCKIHHINVFISTFGN----------------GSLSDHLHDPLLKG------------- 367
VL +++H +V I +G GSL L + G
Sbjct: 79 VLKQVNHPHV-IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSS 137
Query: 368 ------HQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADF 421
+ LT A ++G++Y+ + + VHRD+ NIL+ +G + K++DF
Sbjct: 138 SLDHPDERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDF 194
Query: 422 GLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGV 481
GL + E++ R + G +P +++ ++ S+ + TT++DV++FGV
Sbjct: 195 GLSR---DVYEEDSXVKR---SQGRIPVKWMAIE--------SLFDHIYTTQSDVWSFGV 240
Query: 482 VLAELIT 488
+L E++T
Sbjct: 241 LLWEIVT 247
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 45/242 (18%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDRE--AAIKKMRSNKSKEFFAELKVLCKIHHINVF--- 347
++ ++++IG G FG VY L D AIKK+ +K + EL+++ K+ H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-NRELQIMRKLDHCNIVRLR 91
Query: 348 ISTFGNGSLSDHLHDPLLKGHQPLT------WTARTQIALDAA----------KGIEYIH 391
+ +G D ++ L+ + P T +R + L + + YIH
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 392 DHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEK-EMLATRLVGTPGYLPP 449
HRDIK N+LLD D K+ DFG K R + +R Y P
Sbjct: 152 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAP 203
Query: 450 EYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSLITI 509
E IF T+ DV++ G VLAEL+ G+ + DS ++ +I +
Sbjct: 204 ELIF------------GATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKV 250
Query: 510 MA 511
+
Sbjct: 251 LG 252
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 44/221 (19%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDRE--AAIKKMRSNKSKEFFAELKVLCKIHHINVF--- 347
++ ++++IG G FG VY L D AIKK+ +K + EL+++ K+ H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-NRELQIMRKLDHCNIVRLR 91
Query: 348 ISTFGNGSLSDHLHDPLLKGHQPLT------WTARTQIALDAA----------KGIEYIH 391
+ +G D ++ L+ + P T +R + L + + YIH
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 392 DHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEK-EMLATRLVGTPGYLPP 449
HRDIK N+LLD D K+ DFG K R + +R Y P
Sbjct: 152 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAP 203
Query: 450 EYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
E IF T+ DV++ G VLAEL+ G+
Sbjct: 204 ELIF------------GATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 96/241 (39%), Gaps = 45/241 (18%)
Query: 274 LESERTIIFSLE---EIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-- 326
+ ER + E I E + +G G +G+V F A+KK+
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 327 ---KSKEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGH------------Q 369
+K + EL++L + H NV + F + +D L H Q
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEER 429
LT + +G++YIH A +HRD+K SN+ +++ K+ D GL R
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLA----R 173
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ EM T V T Y PE + + + D+++ G ++AEL+TG
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIM------------LNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 490 K 490
+
Sbjct: 220 R 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 45/242 (18%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDRE--AAIKKMRSNKSKEFFAELKVLCKIHHINVF--- 347
++ ++++IG G FG VY L D AIKK+ +K + EL+++ K+ H N+
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-NRELQIMRKLDHCNIVRLR 80
Query: 348 ISTFGNGSLSDHLHDPLLKGHQPLT------WTARTQIALDAA----------KGIEYIH 391
+ +G D ++ L+ + P T +R + L + + YIH
Sbjct: 81 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 140
Query: 392 DHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEK-EMLATRLVGTPGYLPP 449
HRDIK N+LLD D K+ DFG K R + +R Y P
Sbjct: 141 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAP 192
Query: 450 EYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSLITI 509
E IF T+ DV++ G VLAEL+ G+ + DS ++ +I +
Sbjct: 193 ELIF------------GATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKV 239
Query: 510 MA 511
+
Sbjct: 240 LG 241
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 45/242 (18%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDRE--AAIKKMRSNKSKEFFAELKVLCKIHHINVF--- 347
++ ++++IG G FG VY L D AIKK+ +K + EL+++ K+ H N+
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-NRELQIMRKLDHCNIVRLR 158
Query: 348 ISTFGNGSLSDHLHDPLLKGHQPLT------WTARTQIALDAA----------KGIEYIH 391
+ +G D ++ L+ + P T +R + L + + YIH
Sbjct: 159 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 218
Query: 392 DHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEK-EMLATRLVGTPGYLPP 449
HRDIK N+LLD D K+ DFG K R + +R Y P
Sbjct: 219 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 270
Query: 450 EYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSLITI 509
E IF T+ DV++ G VLAEL+ G+ + DS ++ +I +
Sbjct: 271 ELIF------------GATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKV 317
Query: 510 MA 511
+
Sbjct: 318 LG 319
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 44/221 (19%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDRE--AAIKKMRSNKSKEFFAELKVLCKIHHINVF--- 347
++ ++++IG G FG VY L D AIKK+ +K + EL+++ K+ H N+
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-NRELQIMRKLDHCNIVRLR 87
Query: 348 ISTFGNGSLSDHLHDPLLKGHQPLT------WTARTQIALDAA----------KGIEYIH 391
+ +G D ++ L+ + P T +R + L + + YIH
Sbjct: 88 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 147
Query: 392 DHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEK-EMLATRLVGTPGYLPP 449
HRDIK N+LLD D K+ DFG K R + +R Y P
Sbjct: 148 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAP 199
Query: 450 EYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
E IF T+ DV++ G VLAEL+ G+
Sbjct: 200 ELIF------------GATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 93/218 (42%), Gaps = 44/218 (20%)
Query: 293 NFDESRIIGRGGFGNVYFG--LLGDREAAIK-----KMRSNKSKEFFAELKVLCKIHHIN 345
N+ + IG+G F V +L +E A+K ++ S+ ++ F E++++ ++H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 346 V--------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
+ + + +G + D L+ + AR + ++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGG---EVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH 130
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEY 451
+ VHRD+K N+LLD + K+ADFG N+ + G+P Y PE
Sbjct: 131 ---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC----GSPPYAAPEL 183
Query: 452 IFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
K++ + DV++ GV+L L++G
Sbjct: 184 FQGKKYD------------GPEVDVWSLGVILYTLVSG 209
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 93/218 (42%), Gaps = 44/218 (20%)
Query: 293 NFDESRIIGRGGFGNVYFG--LLGDREAAIK-----KMRSNKSKEFFAELKVLCKIHHIN 345
N+ + IG+G F V +L +E A+K ++ S+ ++ F E++++ ++H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 346 V--------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
+ + + +G + D L+ + AR + ++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGG---EVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH 130
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEY 451
+ VHRD+K N+LLD + K+ADFG N+ + G+P Y PE
Sbjct: 131 ---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC----GSPPYAAPEL 183
Query: 452 IFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
K++ + DV++ GV+L L++G
Sbjct: 184 FQGKKYD------------GPEVDVWSLGVILYTLVSG 209
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 21/131 (16%)
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
+G++++H H R VHRD+K NIL+ + K+ADFGL R +M T +V T
Sbjct: 131 RGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLA----RIYSFQMALTSVVVTL 183
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMK 504
Y PE + + T D+++ G + AE+ ++ L R S+ ++
Sbjct: 184 WYRAPEVLLQSSY-------------ATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLG 229
Query: 505 SLITIMAAVAE 515
++ ++ E
Sbjct: 230 KILDVIGLPGE 240
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 93/236 (39%), Gaps = 55/236 (23%)
Query: 300 IGRGGFGNVYFGL--LGDREAAIKKM--RSNKSKEF-FAELKVLCKIHHINV-------- 346
IG G G V R+ A+K M R + +E F E+ ++ H NV
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 347 -------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
+ G+L+D + L Q T + + + Y+H +
Sbjct: 113 VGEELWVLMEFLQGGALTDIVSQVRLNEEQIAT------VCEAVLQALAYLHAQG---VI 163
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRDIK+ +ILL R K++DFG + K LVGTP ++ PE I +
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR---KXLVGTPYWMAPEVISRSLY-- 218
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD----------DSEPTKMKS 505
T+ D+++ G+++ E++ G+ D DS P K+K+
Sbjct: 219 -----------ATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKN 263
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 21/131 (16%)
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
+G++++H H R VHRD+K NIL+ + K+ADFGL R +M T +V T
Sbjct: 131 RGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLA----RIYSFQMALTSVVVTL 183
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMK 504
Y PE + ++ T D+++ G + AE+ ++ L R S+ ++
Sbjct: 184 WYRAPEVL-------------LQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLG 229
Query: 505 SLITIMAAVAE 515
++ ++ E
Sbjct: 230 KILDVIGLPGE 240
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 104/229 (45%), Gaps = 36/229 (15%)
Query: 287 IEEATNNFDESRIIGRGGFGNVY------FGLLGDREAAIKKMRSNKSKEFFAELKVL-- 338
+E ++F++ +G G G V+ GL+ R+ +++ + EL+VL
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 339 CKIHHINVFISTF-GNGSLS---DHLH----DPLLKGHQPLTWTARTQIALDAAKGIEYI 390
C +I F F +G +S +H+ D +LK + ++++ KG+ Y+
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 391 HDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPE 450
+ K + +HRD+K SNIL++ K+ DFG+ + +A VGT Y+ PE
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPE 173
Query: 451 YIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
+ + + ++D+++ G+ L E+ G+ + D++
Sbjct: 174 RLQGTHY-------------SVQSDIWSMGLSLVEMAVGRYPIPPPDAK 209
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 44/218 (20%)
Query: 293 NFDESRIIGRGGFGNVYFG--LLGDREAAIK-----KMRSNKSKEFFAELKVLCKIHHIN 345
N+ + IG+G F V +L +E A+K ++ S+ ++ F E++++ ++H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 346 V--------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
+ + + +G + D L+ + AR + ++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGG---EVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH 130
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEY 451
+ VHRD+K N+LLD + K+ADFG E T ++ A G P Y PE
Sbjct: 131 ---QKFIVHRDLKAENLLLDADMNIKIADFGFS--NEFTFGNKLDA--FCGAPPYAAPEL 183
Query: 452 IFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
K++ + DV++ GV+L L++G
Sbjct: 184 FQGKKYD------------GPEVDVWSLGVILYTLVSG 209
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 92/232 (39%), Gaps = 48/232 (20%)
Query: 292 NNFDESRIIGRGGFGNV----------YFGL-LGDREAAIKK-----------MRSNKSK 329
N F+ +++G+G FG V Y+ + + +E + K + N
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 330 EFFAELKVLCKIHHINVFISTFGNG-SLSDHL-HDPLLKGHQPLTWTARTQIALDAAKGI 387
F LK + H F+ + NG L HL + + + + A ALD
Sbjct: 208 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD----- 262
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYL 447
Y+H ++ V+RD+K N++LD K+ DFGL K E + + T GTP YL
Sbjct: 263 -YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKT-FCGTPEYL 316
Query: 448 PPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
PE + + D + GVV+ E++ G+ D E
Sbjct: 317 APEVL-------------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 355
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 21/131 (16%)
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
+G++++H H R VHRD+K NIL+ + K+ADFGL R +M T +V T
Sbjct: 131 RGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLA----RIYSFQMALTSVVVTL 183
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMK 504
Y PE + ++ T D+++ G + AE+ ++ L R S+ ++
Sbjct: 184 WYRAPEVL-------------LQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLG 229
Query: 505 SLITIMAAVAE 515
++ ++ E
Sbjct: 230 KILDVIGLPGE 240
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 104/229 (45%), Gaps = 36/229 (15%)
Query: 287 IEEATNNFDESRIIGRGGFGNVY------FGLLGDREAAIKKMRSNKSKEFFAELKVL-- 338
+E ++F++ +G G G V+ GL+ R+ +++ + EL+VL
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 339 CKIHHINVFISTF-GNGSLS---DHLH----DPLLKGHQPLTWTARTQIALDAAKGIEYI 390
C +I F F +G +S +H+ D +LK + ++++ KG+ Y+
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 391 HDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPE 450
+ K + +HRD+K SNIL++ K+ DFG+ + +A VGT Y+ PE
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPE 173
Query: 451 YIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
+ + + ++D+++ G+ L E+ G+ + D++
Sbjct: 174 RLQGTHY-------------SVQSDIWSMGLSLVEMAVGRYPIPPPDAK 209
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 101/231 (43%), Gaps = 49/231 (21%)
Query: 293 NFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIHHIN 345
NF + IG G +G VY L A+ K+R + E E+ +L +++H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 346 VF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GIEYIH 391
+ I T L + LH L K + +A T I L K G+ + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKF---MDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPGYLP 448
H R +HRD+K N+L++ K+ADFGL + + RT E++ T Y
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV------TLWYRA 171
Query: 449 PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 172 PEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 209
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 101/231 (43%), Gaps = 49/231 (21%)
Query: 293 NFDESRIIGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIHHIN 345
NF + IG G +G VY L A+ K+R + E E+ +L +++H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 346 VF-----ISTFGNGSLS-DHLHDPLLKGHQPLTWTARTQIALDAAK--------GIEYIH 391
+ I T L + LH L K + +A T I L K G+ + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKF---MDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPGYLP 448
H R +HRD+K N+L++ K+ADFGL + + RT E++ T Y
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV------TLWYRA 170
Query: 449 PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
PE + ++ +T D+++ G + AE++T +RAL DSE
Sbjct: 171 PEILLGCKY------------YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 208
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 104/229 (45%), Gaps = 36/229 (15%)
Query: 287 IEEATNNFDESRIIGRGGFGNVY------FGLLGDREAAIKKMRSNKSKEFFAELKVL-- 338
+E ++F++ +G G G V+ GL+ R+ +++ + EL+VL
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 339 CKIHHINVFISTF-GNGSLS---DHLH----DPLLKGHQPLTWTARTQIALDAAKGIEYI 390
C +I F F +G +S +H+ D +LK + ++++ KG+ Y+
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 391 HDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPE 450
+ K + +HRD+K SNIL++ K+ DFG+ + +A VGT Y+ PE
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPE 173
Query: 451 YIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
+ + + ++D+++ G+ L E+ G+ + D++
Sbjct: 174 RLQGTHY-------------SVQSDIWSMGLSLVEMAVGRYPIPPPDAK 209
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 104/229 (45%), Gaps = 36/229 (15%)
Query: 287 IEEATNNFDESRIIGRGGFGNVY------FGLLGDREAAIKKMRSNKSKEFFAELKVL-- 338
+E ++F++ +G G G V+ GL+ R+ +++ + EL+VL
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 339 CKIHHINVFISTF-GNGSLS---DHLH----DPLLKGHQPLTWTARTQIALDAAKGIEYI 390
C +I F F +G +S +H+ D +LK + ++++ KG+ Y+
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 391 HDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPE 450
+ K + +HRD+K SNIL++ K+ DFG+ + +A VGT Y+ PE
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPE 173
Query: 451 YIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
+ + + ++D+++ G+ L E+ G+ + D++
Sbjct: 174 RLQGTHY-------------SVQSDIWSMGLSLVEMAVGRYPIPPPDAK 209
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 35/190 (18%)
Query: 319 AIKKMRSNKSKE----FFAELKVLCKIHHINVFISTFGN--------------GSLSDHL 360
A+K+MR + +KE +L V+ K H + FG G+ ++ L
Sbjct: 54 AVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKL 113
Query: 361 HDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVAD 420
++G P + +A+ K + Y+ + K +HRD+K SNILLD+ + K+ D
Sbjct: 114 KK-RMQGPIPERILGKMTVAI--VKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCD 168
Query: 421 FGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFG 480
FG+ K+ R G Y+ PE R D + + DV++ G
Sbjct: 169 FGISGRLVDDKAKD----RSAGCAAYMAPE-------RIDPPDPT-KPDYDIRADVWSLG 216
Query: 481 VVLAELITGK 490
+ L EL TG+
Sbjct: 217 ISLVELATGQ 226
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 91/232 (39%), Gaps = 48/232 (20%)
Query: 292 NNFDESRIIGRGGFGNV----------YFGLLGDREAAI------------KKMRSNKSK 329
N F+ +++G+G FG V Y+ + ++ I ++ N
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 330 EFFAELKVLCKIHHINVFISTFGNG-SLSDHL-HDPLLKGHQPLTWTARTQIALDAAKGI 387
F LK + H F+ + NG L HL + + + + A ALD
Sbjct: 211 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD----- 265
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYL 447
Y+H ++ V+RD+K N++LD K+ DFGL K E + + T GTP YL
Sbjct: 266 -YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKT-FCGTPEYL 319
Query: 448 PPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
PE + + D + GVV+ E++ G+ D E
Sbjct: 320 APEVL-------------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 358
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 399 VHRDIKTSNILLDDGLRAKVADFGL-VKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRF 457
VHRD+K NILLDD ++ +++DFG LE +E L GTPGYL PE +K
Sbjct: 222 VHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRE-----LCGTPGYLAPE--ILKCS 274
Query: 458 RFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ H + D++A GV+L L+ G
Sbjct: 275 MDETHPG-----YGKEVDLWACGVILFTLLAG 301
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 29/160 (18%)
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGT 443
A G+EY+ H VH+D+ T N+L+ D L K++D GL + + ++L L+
Sbjct: 155 AAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPI 211
Query: 444 PGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRALI----RDDS 498
++ PE I +F D +D++++GVVL E+ + G + +D
Sbjct: 212 -RWMAPEAIMYGKFSID-------------SDIWSYGVVLWEVFSYGLQPYCGYSNQDVV 257
Query: 499 EPTKMKSLITIMAAVAEW-------CLNEDAVDRPEMRDI 531
E + + ++ W C NE RP +DI
Sbjct: 258 EMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 297
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 54/225 (24%)
Query: 298 RIIGRGGFGNVYFG-----LLGDREAAIKKMRSNKSK------EFFAELKVLCKI--HHI 344
R +G+G FG VY G + G+ E + N+S EF E V+ HH+
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 81
Query: 345 N-------------VFISTFGNGSLSDHL--------HDPLLKGHQPLTWTARTQIALDA 383
V + +G L +L ++P G P T Q+A +
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP---GRPPPTLQEMIQMAAEI 138
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGT 443
A G+ Y++ ++VHRD+ N ++ K+ DFG+ + T+ G
Sbjct: 139 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK------GG 189
Query: 444 PGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
G LP R+ S+ + TT +D+++FGVVL E+ +
Sbjct: 190 KGLLP--------VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 45/242 (18%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDRE--AAIKKMRSNKSKEFFAELKVLCKIHHINVF--- 347
++ ++++IG G FG VY L D AIKK+ +K + EL+++ K+ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-NRELQIMRKLDHCNIVRLR 79
Query: 348 ISTFGNGSLSDHLHDPLLKGHQPLT------WTARTQIALDAA----------KGIEYIH 391
+ +G D ++ L+ + P T +R + L + + YIH
Sbjct: 80 YFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 392 DHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEK-EMLATRLVGTPGYLPP 449
HRDIK N+LLD D K+ DFG K R + +R Y P
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAP 191
Query: 450 EYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSLITI 509
E IF T+ DV++ G VLAEL+ G+ + DS ++ +I +
Sbjct: 192 ELIF------------GATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKV 238
Query: 510 MA 511
+
Sbjct: 239 LG 240
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 29/160 (18%)
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGT 443
A G+EY+ H VH+D+ T N+L+ D L K++D GL + + ++L L+
Sbjct: 138 AAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPI 194
Query: 444 PGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-GKRALI----RDDS 498
++ PE I +F D +D++++GVVL E+ + G + +D
Sbjct: 195 -RWMAPEAIMYGKFSID-------------SDIWSYGVVLWEVFSYGLQPYCGYSNQDVV 240
Query: 499 EPTKMKSLITIMAAVAEW-------CLNEDAVDRPEMRDI 531
E + + ++ W C NE RP +DI
Sbjct: 241 EMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 280
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 37/217 (17%)
Query: 292 NNFDESRIIGRGGFGNVYFG--LLGDREAAIKKM------RSNKSKEFFAELKVLCKIHH 343
+F +I+G G F V L RE AIK + + NK E V+ ++ H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 344 ---INVFISTFGNGS-----LSDHLHDPLLKGHQPLTWTARTQIALDAAK---GIEYIHD 392
+ ++ TF + LS + LLK + + T A+ +EY+H
Sbjct: 70 PFFVKLYF-TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 128
Query: 393 HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
+HRD+K NILL++ + ++ DFG K+ K+ A VGT Y+ PE +
Sbjct: 129 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVGTAQYVSPELL 184
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
E +D++A G ++ +L+ G
Sbjct: 185 -------------TEKSACKSSDLWALGCIIYQLVAG 208
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 101/221 (45%), Gaps = 40/221 (18%)
Query: 288 EEATNNFDESRIIGRGGFGNVY------FGLLGDREAAIKKMRSNKSKEFFAELKVL--C 339
E ++F++ +G G G V+ GL+ R+ +++ + EL+VL C
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 64
Query: 340 KIHHINVFISTF-GNGSLS---DHLH----DPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
+I F F +G +S +H+ D +LK + ++++ KG+ Y+
Sbjct: 65 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 124
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK--LEERTNEKEMLATRLVGTPGYLPP 449
+ K + +HRD+K SNIL++ K+ DFG+ ++E NE VGT Y+ P
Sbjct: 125 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANE-------FVGTRSYMSP 175
Query: 450 EYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
E + + + ++D+++ G+ L E+ G+
Sbjct: 176 ERLQGTHY-------------SVQSDIWSMGLSLVEMAVGR 203
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 92/217 (42%), Gaps = 37/217 (17%)
Query: 292 NNFDESRIIGRGGFGNVYFG--LLGDREAAIKKM------RSNKSKEFFAELKVLCKIHH 343
+F +I+G G F V L RE AIK + + NK E V+ ++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 344 ---INVFISTFGNG-----SLSDHLHDPLLKGHQPLTWTARTQIALDAAK---GIEYIHD 392
+ ++ TF + LS + LLK + + T A+ +EY+H
Sbjct: 92 PFFVKLYF-TFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 393 HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
+HRD+K NILL++ + ++ DFG K+ K+ A VGT Y+ PE +
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANSFVGTAQYVSPELL 206
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
E + +D++A G ++ +L+ G
Sbjct: 207 -------------TEKSASKSSDLWALGCIIYQLVAG 230
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 93/218 (42%), Gaps = 44/218 (20%)
Query: 293 NFDESRIIGRGGFGNVYFG--LLGDREAAIK-----KMRSNKSKEFFAELKVLCKIHHIN 345
N+ + IG+G F V +L +E A++ ++ S+ ++ F E++++ ++H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 346 V--------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
+ + + +G + D L+ + AR + ++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGG---EVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH 130
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEY 451
+ VHRD+K N+LLD + K+ADFG N+ + G+P Y PE
Sbjct: 131 ---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD----EFCGSPPYAAPEL 183
Query: 452 IFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
K++ + DV++ GV+L L++G
Sbjct: 184 FQGKKYD------------GPEVDVWSLGVILYTLVSG 209
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 93/218 (42%), Gaps = 44/218 (20%)
Query: 293 NFDESRIIGRGGFGNVYFG--LLGDREAAIK-----KMRSNKSKEFFAELKVLCKIHHIN 345
N+ + IG+G F V +L +E A++ ++ S+ ++ F E++++ ++H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 346 V--------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
+ + + +G + D L+ + AR + ++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGG---EVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH 130
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEY 451
+ VHRD+K N+LLD + K+ADFG N+ + G+P Y PE
Sbjct: 131 ---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC----GSPPYAAPEL 183
Query: 452 IFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
K++ + DV++ GV+L L++G
Sbjct: 184 FQGKKYD------------GPEVDVWSLGVILYTLVSG 209
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 92/218 (42%), Gaps = 44/218 (20%)
Query: 293 NFDESRIIGRGGFGNVYFG--LLGDREAAIK-----KMRSNKSKEFFAELKVLCKIHHIN 345
N+ + IG+G F V +L +E A+K ++ S+ ++ F E++++ ++H N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 346 V--------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
+ + + +G + D L+ AR + ++Y H
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGG---EVFDYLVAHGWMKEKEARAKFR-QIVSAVQYCH 123
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEY 451
+ VHRD+K N+LLD + K+ADFG N+ + G+P Y PE
Sbjct: 124 ---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC----GSPPYAAPEL 176
Query: 452 IFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
K++ + DV++ GV+L L++G
Sbjct: 177 FQGKKYD------------GPEVDVWSLGVILYTLVSG 202
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 37/217 (17%)
Query: 292 NNFDESRIIGRGGFGNVYFG--LLGDREAAIKKM------RSNKSKEFFAELKVLCKIHH 343
+F +I+G G F V L RE AIK + + NK E V+ ++ H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 344 ---INVFISTFGNGS-----LSDHLHDPLLKGHQPLTWTARTQIALDAAK---GIEYIHD 392
+ ++ TF + LS + LLK + + T A+ +EY+H
Sbjct: 67 PFFVKLYF-TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 125
Query: 393 HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
+HRD+K NILL++ + ++ DFG K+ K+ A VGT Y+ PE +
Sbjct: 126 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVGTAQYVSPELL 181
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
E +D++A G ++ +L+ G
Sbjct: 182 -------------TEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 37/217 (17%)
Query: 292 NNFDESRIIGRGGFGNVYFG--LLGDREAAIKKM------RSNKSKEFFAELKVLCKIHH 343
+F +I+G G F V L RE AIK + + NK E V+ ++ H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 344 ---INVFISTFGNGS-----LSDHLHDPLLKGHQPLTWTARTQIALDAAK---GIEYIHD 392
+ ++ TF + LS + LLK + + T A+ +EY+H
Sbjct: 68 PFFVKLYF-TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 126
Query: 393 HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
+HRD+K NILL++ + ++ DFG K+ K+ A VGT Y+ PE +
Sbjct: 127 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVGTAQYVSPELL 182
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
E +D++A G ++ +L+ G
Sbjct: 183 -------------TEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 34/173 (19%)
Query: 378 QIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLA 437
I + A+ +E++H +HRD+K SNI KV DFGLV ++ E++ +
Sbjct: 168 HIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
Query: 438 TRL---------VGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
T + VGT Y+ PE I + + K D+F+ G++L EL+
Sbjct: 225 TPMPAYATHXGQVGTKLYMSPEQIHGNNY-------------SHKVDIFSLGLILFELLY 271
Query: 489 G-----KRALIRDDSEPTKMKSLITIMAA----VAEWCLNEDAVDRPEMRDIV 532
+R I D K L T + + L+ +RPE DI+
Sbjct: 272 SFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDII 324
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 37/217 (17%)
Query: 292 NNFDESRIIGRGGFGNVYFG--LLGDREAAIKKM------RSNKSKEFFAELKVLCKIHH 343
+F +I+G G F V L RE AIK + + NK E V+ ++ H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 344 ---INVFISTFGNGS-----LSDHLHDPLLKGHQPLTWTARTQIALDAAK---GIEYIHD 392
+ ++ TF + LS + LLK + + T A+ +EY+H
Sbjct: 74 PFFVKLYF-TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 132
Query: 393 HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
+HRD+K NILL++ + ++ DFG K+ K+ A VGT Y+ PE +
Sbjct: 133 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVGTAQYVSPELL 188
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
E +D++A G ++ +L+ G
Sbjct: 189 -------------TEKSACKSSDLWALGCIIYQLVAG 212
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 103/228 (45%), Gaps = 36/228 (15%)
Query: 288 EEATNNFDESRIIGRGGFGNVY------FGLLGDREAAIKKMRSNKSKEFFAELKVL--C 339
E ++F++ +G G G V+ GL+ R+ +++ + EL+VL C
Sbjct: 64 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 123
Query: 340 KIHHINVFISTF-GNGSLS---DHLH----DPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
+I F F +G +S +H+ D +LK + ++++ KG+ Y+
Sbjct: 124 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 183
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEY 451
+ K + +HRD+K SNIL++ K+ DFG+ + +A VGT Y+ PE
Sbjct: 184 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPER 236
Query: 452 IFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
+ + + ++D+++ G+ L E+ G+ + D++
Sbjct: 237 LQGTHY-------------SVQSDIWSMGLSLVEMAVGRYPIPPPDAK 271
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 44/210 (20%)
Query: 300 IGRGGFGNVYFGLLGDRE--AAIKKMRSN--KSKEFFAELKVLCKIHHINVF-------- 347
+G G +G VY G+ A+K ++ + + +EF E V+ +I H N+
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 348 ---------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARY 398
T+GN L D+L + Q ++ +A + +EY+ K +
Sbjct: 288 EPPFYIITEFMTYGN--LLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLE---KKNF 339
Query: 399 VHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFR 458
+HR++ N L+ + KVADFGL +L M G P +
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSRL--------MTGDTYTAHAGAKFP-------IK 384
Query: 459 FDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ S+ + + K+DV+AFGV+L E+ T
Sbjct: 385 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 67/159 (42%), Gaps = 31/159 (19%)
Query: 354 GSLSDHLHDPLLKGHQPLTWTARTQIALDAAK---GIEYIHDHTKARYVHRDIKTSNILL 410
GSL D+L P Q+ L A + G+ Y+H Y+HRD+ N+LL
Sbjct: 120 GSLRDYL---------PRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLL 167
Query: 411 DDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQV 470
D+ K+ DFGL K +E + + PE + +F +
Sbjct: 168 DNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYY----------- 216
Query: 471 TTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSLITI 509
+DV++FGV L EL+T + S PTK LI I
Sbjct: 217 --ASDVWSFGVTLYELLTHCDS---SQSPPTKFLELIGI 250
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 37/217 (17%)
Query: 292 NNFDESRIIGRGGFGNVYFG--LLGDREAAIKKM------RSNKSKEFFAELKVLCKIHH 343
+F +I+G G F V L RE AIK + + NK E V+ ++ H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 344 ---INVFISTFGNG-----SLSDHLHDPLLKGHQPLTWTARTQIALDAAK---GIEYIHD 392
+ ++ TF + LS + LLK + + T A+ +EY+H
Sbjct: 93 PFFVKLYF-TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 151
Query: 393 HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
+HRD+K NILL++ + ++ DFG K+ K+ A VGT Y+ PE +
Sbjct: 152 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANSFVGTAQYVSPELL 207
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
E +D++A G ++ +L+ G
Sbjct: 208 -------------TEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 37/217 (17%)
Query: 292 NNFDESRIIGRGGFGNVYFG--LLGDREAAIKKM------RSNKSKEFFAELKVLCKIHH 343
+F +I+G G F V L RE AIK + + NK E V+ ++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 344 ---INVFISTFGNGS-----LSDHLHDPLLKGHQPLTWTARTQIALDAAK---GIEYIHD 392
+ ++ TF + LS + LLK + + T A+ +EY+H
Sbjct: 92 PFFVKLYF-TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 393 HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
+HRD+K NILL++ + ++ DFG K+ K+ A VGT Y+ PE +
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVGTAQYVSPELL 206
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
E +D++A G ++ +L+ G
Sbjct: 207 -------------TEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 37/217 (17%)
Query: 292 NNFDESRIIGRGGFGNVYFG--LLGDREAAIKKM------RSNKSKEFFAELKVLCKIHH 343
+F +I+G G F V L RE AIK + + NK E V+ ++ H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 344 ---INVFISTFGNG-----SLSDHLHDPLLKGHQPLTWTARTQIALDAAK---GIEYIHD 392
+ ++ TF + LS + LLK + + T A+ +EY+H
Sbjct: 95 PFFVKLYF-TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 153
Query: 393 HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
+HRD+K NILL++ + ++ DFG K+ K+ A VGT Y+ PE +
Sbjct: 154 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVGTAQYVSPELL 209
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
E +D++A G ++ +L+ G
Sbjct: 210 -------------TEKSACKSSDLWALGCIIYQLVAG 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 37/217 (17%)
Query: 292 NNFDESRIIGRGGFGNVYFG--LLGDREAAIKKM------RSNKSKEFFAELKVLCKIHH 343
+F +I+G G F V L RE AIK + + NK E V+ ++ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 344 ---INVFISTFGNGS-----LSDHLHDPLLKGHQPLTWTARTQIALDAAK---GIEYIHD 392
+ ++ TF + LS + LLK + + T A+ +EY+H
Sbjct: 90 PFFVKLYF-TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 393 HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
+HRD+K NILL++ + ++ DFG K+ K+ A VGT Y+ PE +
Sbjct: 149 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVGTAQYVSPELL 204
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
E +D++A G ++ +L+ G
Sbjct: 205 -------------TEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 37/217 (17%)
Query: 292 NNFDESRIIGRGGFGNVYFG--LLGDREAAIKKM------RSNKSKEFFAELKVLCKIHH 343
+F +I+G G F V L RE AIK + + NK E V+ ++ H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 344 ---INVFISTFGNGS-----LSDHLHDPLLKGHQPLTWTARTQIALDAAK---GIEYIHD 392
+ ++ TF + LS + LLK + + T A+ +EY+H
Sbjct: 69 PFFVKLYF-TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 127
Query: 393 HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
+HRD+K NILL++ + ++ DFG K+ K+ A VGT Y+ PE +
Sbjct: 128 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVGTAQYVSPELL 183
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
E +D++A G ++ +L+ G
Sbjct: 184 -------------TEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 37/217 (17%)
Query: 292 NNFDESRIIGRGGFGNVYFG--LLGDREAAIKKM------RSNKSKEFFAELKVLCKIHH 343
+F +I+G G F V L RE AIK + + NK E V+ ++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 344 ---INVFISTFGNG-----SLSDHLHDPLLKGHQPLTWTARTQIALDAAK---GIEYIHD 392
+ ++ TF + LS + LLK + + T A+ +EY+H
Sbjct: 92 PFFVKLYF-TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 393 HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
+HRD+K NILL++ + ++ DFG K+ K+ A VGT Y+ PE +
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVGTAQYVSPELL 206
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
E +D++A G ++ +L+ G
Sbjct: 207 -------------TEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 37/217 (17%)
Query: 292 NNFDESRIIGRGGFGNVYFG--LLGDREAAIKKM------RSNKSKEFFAELKVLCKIHH 343
+F +I+G G F V L RE AIK + + NK E V+ ++ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 344 ---INVFISTFGNG-----SLSDHLHDPLLKGHQPLTWTARTQIALDAAK---GIEYIHD 392
+ ++ TF + LS + LLK + + T A+ +EY+H
Sbjct: 90 PFFVKLYF-TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 393 HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
+HRD+K NILL++ + ++ DFG K+ K+ A VGT Y+ PE +
Sbjct: 149 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVGTAQYVSPELL 204
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
E +D++A G ++ +L+ G
Sbjct: 205 -------------TEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 37/217 (17%)
Query: 292 NNFDESRIIGRGGFGNVYFG--LLGDREAAIKKM------RSNKSKEFFAELKVLCKIHH 343
+F +I+G G F V L RE AIK + + NK E V+ ++ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 344 ---INVFISTFGNG-----SLSDHLHDPLLKGHQPLTWTARTQIALDAAK---GIEYIHD 392
+ ++ TF + LS + LLK + + T A+ +EY+H
Sbjct: 90 PFFVKLYF-TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 393 HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
+HRD+K NILL++ + ++ DFG K+ K+ A VGT Y+ PE +
Sbjct: 149 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANAFVGTAQYVSPELL 204
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
E +D++A G ++ +L+ G
Sbjct: 205 -------------TEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 378 QIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLA 437
+I L K + ++ ++ K +HRDIK SNILLD K+ DFG+ + K
Sbjct: 129 KITLATVKALNHLKENLKI--IHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK---- 182
Query: 438 TRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
TR G Y+ PE R D +S V ++DV++ G+ L EL TG+
Sbjct: 183 TRDAGCRPYMAPE-------RIDPSASRQGYDV--RSDVWSLGITLYELATGR 226
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 37/217 (17%)
Query: 292 NNFDESRIIGRGGFGNVYFG--LLGDREAAIKKM------RSNKSKEFFAELKVLCKIHH 343
+F +I+G G F V L RE AIK + + NK E V+ ++ H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 344 ---INVFISTFGNG-----SLSDHLHDPLLKGHQPLTWTARTQIALDAAK---GIEYIHD 392
+ ++ TF + LS + LLK + + T A+ +EY+H
Sbjct: 93 PFFVKLYF-TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 151
Query: 393 HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
+HRD+K NILL++ + ++ DFG K+ K+ A VGT Y+ PE +
Sbjct: 152 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVGTAQYVSPELL 207
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
E +D++A G ++ +L+ G
Sbjct: 208 -------------TEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 37/217 (17%)
Query: 292 NNFDESRIIGRGGFGNVYFG--LLGDREAAIKKM------RSNKSKEFFAELKVLCKIHH 343
+F +I+G G F V L RE AIK + + NK E V+ ++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 344 ---INVFISTFGNG-----SLSDHLHDPLLKGHQPLTWTARTQIALDAAK---GIEYIHD 392
+ ++ TF + LS + LLK + + T A+ +EY+H
Sbjct: 92 PFFVKLYF-TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 393 HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
+HRD+K NILL++ + ++ DFG K+ K+ A VGT Y+ PE +
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVGTAQYVSPELL 206
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
E +D++A G ++ +L+ G
Sbjct: 207 -------------TEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 37/217 (17%)
Query: 292 NNFDESRIIGRGGFGNVYFG--LLGDREAAIKKM------RSNKSKEFFAELKVLCKIHH 343
+F +I+G G F V L RE AIK + + NK E V+ ++ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 344 ---INVFISTFGNGS-----LSDHLHDPLLKGHQPLTWTARTQIALDAAK---GIEYIHD 392
+ ++ TF + LS + LLK + + T A+ +EY+H
Sbjct: 89 PFFVKLYF-TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 147
Query: 393 HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
+HRD+K NILL++ + ++ DFG K+ K+ A VGT Y+ PE +
Sbjct: 148 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANSFVGTAQYVSPELL 203
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
E +D++A G ++ +L+ G
Sbjct: 204 -------------TEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 103/238 (43%), Gaps = 51/238 (21%)
Query: 284 LEEIEEATNNFDESRIIGRGGFGNVYFGLLGDREA-----AIKKMR-----SNKSKEFFA 333
LE++ F R++G+G FG+V L + A+K ++ S+ +EF
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 334 ELKVLCKIHH------INVFISTFGNGSLS-----------DHLHDPLLK---GHQPLTW 373
E + + H + V + + G L LH LL G P
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 374 TART--QIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLV-KLEERT 430
+T + +D A G+EY+ + ++HRD+ N +L + + VADFGL K+
Sbjct: 135 PLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
Query: 431 NEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
++ A++ LP +++ ++ +++ T +DV+AFGV + E++T
Sbjct: 192 YYRQGCASK-------LPVKWLALESLADNLY--------TVHSDVWAFGVTMWEIMT 234
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 37/217 (17%)
Query: 292 NNFDESRIIGRGGFGNVYFG--LLGDREAAIKKM------RSNKSKEFFAELKVLCKIHH 343
+F +I+G G F V L RE AIK + + NK E V+ ++ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 344 ---INVFISTFGNGS-----LSDHLHDPLLKGHQPLTWTARTQIALDAAK---GIEYIHD 392
+ ++ TF + LS + LLK + + T A+ +EY+H
Sbjct: 89 PFFVKLYF-TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 147
Query: 393 HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
+HRD+K NILL++ + ++ DFG K+ K+ A VGT Y+ PE +
Sbjct: 148 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVGTAQYVSPELL 203
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
E +D++A G ++ +L+ G
Sbjct: 204 -------------TEKSACKSSDLWALGCIIYQLVAG 227
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 37/217 (17%)
Query: 292 NNFDESRIIGRGGFGNVYFG--LLGDREAAIKKM------RSNKSKEFFAELKVLCKIHH 343
+F +I+G G F V L RE AIK + + NK E V+ ++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 344 ---INVFISTFGNG-----SLSDHLHDPLLKGHQPLTWTARTQIALDAAK---GIEYIHD 392
+ ++ TF + LS + LLK + + T A+ +EY+H
Sbjct: 92 PFFVKLYF-TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 393 HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
+HRD+K NILL++ + ++ DFG K+ K+ A VGT Y+ PE +
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVGTAQYVSPELL 206
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
E +D++A G ++ +L+ G
Sbjct: 207 -------------TEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 37/217 (17%)
Query: 292 NNFDESRIIGRGGFGNVYFG--LLGDREAAIKKM------RSNKSKEFFAELKVLCKIHH 343
+F +I+G G F V L RE AIK + + NK E V+ ++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 344 ---INVFISTFGNG-----SLSDHLHDPLLKGHQPLTWTARTQIALDAAK---GIEYIHD 392
+ ++ TF + LS + LLK + + T A+ +EY+H
Sbjct: 92 PFFVKLYF-TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 393 HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
+HRD+K NILL++ + ++ DFG K+ K+ A VGT Y+ PE +
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVGTAQYVSPELL 206
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
E +D++A G ++ +L+ G
Sbjct: 207 -------------TEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 50/218 (22%)
Query: 298 RIIGRGGFGNVYFGLLGDR----EAAIKKMRSNKSK----EFFAELKVLCKIHHINVF-- 347
R +G G FG+V+ L+ +R E IK + ++S+ + AE++VL + H N+
Sbjct: 28 RKLGSGAFGDVH--LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 348 -------------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHT 394
+ T G L + + +G + L+ ++ + Y H
Sbjct: 86 FEVFEDYHNMYIVMETCEGGELLERIVSAQARG-KALSEGYVAELMKQMMNALAYFHSQ- 143
Query: 395 KARYVHRDIKTSNILLDDGLRA---KVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEY 451
VH+D+K NIL D K+ DFGL +L +++E +T GT Y+ PE
Sbjct: 144 --HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF-KSDEH---STNAAGTALYMAPE- 196
Query: 452 IFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
V + VT K D+++ GVV+ L+TG
Sbjct: 197 -------------VFKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 89/214 (41%), Gaps = 42/214 (19%)
Query: 298 RIIGRGGFGNV---YFGLLGDREAAIKKMRSNKS----KEFFAELKVLCKIHHINVF--- 347
R +G G +G+V Y L + A K R +S + + EL++L + H NV
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 348 --------ISTFGNGSLSDHLHDPLLKG---HQPLTWTARTQIALDAAKGIEYIHDHTKA 396
I F L L L Q L+ + +G++YIH A
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH---SA 142
Query: 397 RYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKR 456
+HRD+K SN+ +++ ++ DFGL R ++EM T V T Y PE +
Sbjct: 143 GIIHRDLKPSNVAVNEDCELRILDFGLA----RQADEEM--TGYVATRWYRAPEIM---- 192
Query: 457 FRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
+ + D+++ G ++AEL+ GK
Sbjct: 193 --------LNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 42/214 (19%)
Query: 298 RIIGRGGFGNV---YFGLLGDREAAIKKMRSNKS----KEFFAELKVLCKIHHINVF--- 347
R +G G +G+V Y L + A K R +S + + EL++L + H NV
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 348 --------ISTFGNGSLSDHLHDPLLKG---HQPLTWTARTQIALDAAKGIEYIHDHTKA 396
I F L L L Q L+ + +G++YIH A
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIH---SA 150
Query: 397 RYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKR 456
+HRD+K SN+ +++ ++ DFGL R ++EM T V T Y PE I +
Sbjct: 151 GIIHRDLKPSNVAVNEDSELRILDFGLA----RQADEEM--TGYVATRWYRAPE-IMLNW 203
Query: 457 FRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
++ D+++ G ++AEL+ GK
Sbjct: 204 MHYNQ-----------TVDIWSVGCIMAELLQGK 226
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 36/228 (15%)
Query: 288 EEATNNFDESRIIGRGGFGNVY------FGLLGDREAAIKKMRSNKSKEFFAELKVL--C 339
E ++F++ +G G G V+ GL+ R+ +++ + EL+VL C
Sbjct: 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 88
Query: 340 KIHHINVFISTF-GNGSLS---DHLH----DPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
+I F F +G +S +H+ D +LK + ++++ KG+ Y+
Sbjct: 89 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 148
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEY 451
+ K + +HRD+K SNIL++ K+ DFG+ + +A VGT Y+ PE
Sbjct: 149 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPER 201
Query: 452 IFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
+ H SV ++D+++ G+ L E+ G+ + D++
Sbjct: 202 L------QGTHYSV-------QSDIWSMGLSLVEMAVGRYPIPPPDAK 236
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 39/171 (22%)
Query: 292 NNFDESRIIGRGGFGNVY--FGLLGDREAAIKKMRSNKSK--EFFAELKVLCKIHHINV- 346
++F+E ++G+G FG V L R AIKK+R + K +E+ +L ++H V
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 347 -----------FISTFG----------------NGSLSDHLHDPLLKGHQPLTWTARTQI 379
F+ N +L D +H L + W QI
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQI 125
Query: 380 ALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERT 430
+ + YIH +HRD+K NI +D+ K+ DFGL K R+
Sbjct: 126 L----EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 100/219 (45%), Gaps = 36/219 (16%)
Query: 288 EEATNNFDESRIIGRGGFGNVY------FGLLGDREAAIKKMRSNKSKEFFAELKVL--C 339
E ++F++ +G G G V+ GL+ R+ +++ + EL+VL C
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 80
Query: 340 KIHHINVFISTF-GNGSLS---DHLH----DPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
+I F F +G +S +H+ D +LK + ++++ KG+ Y+
Sbjct: 81 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 140
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEY 451
+ K + +HRD+K SNIL++ K+ DFG+ + +A VGT Y+ PE
Sbjct: 141 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPER 193
Query: 452 IFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
+ H SV ++D+++ G+ L E+ G+
Sbjct: 194 L------QGTHYSV-------QSDIWSMGLSLVEMAVGR 219
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 88/210 (41%), Gaps = 44/210 (20%)
Query: 300 IGRGGFGNVYFGLLGDRE--AAIKKMRSN--KSKEFFAELKVLCKIHHINVF-------- 347
+G G +G VY G+ A+K ++ + + +EF E V+ +I H N+
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 348 ---------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARY 398
T+GN L D+L + Q + +A + +EY+ K +
Sbjct: 285 EPPFYIITEFMTYGN--LLDYLREC---NRQEVNAVVLLYMATQISSAMEYLE---KKNF 336
Query: 399 VHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFR 458
+HR++ N L+ + KVADFGL +L M G P +
Sbjct: 337 IHRNLAARNCLVGENHLVKVADFGLSRL--------MTGDTYTAHAGAKFP-------IK 381
Query: 459 FDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ S+ + + K+DV+AFGV+L E+ T
Sbjct: 382 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 92/225 (40%), Gaps = 54/225 (24%)
Query: 298 RIIGRGGFGNVYFG-----LLGDREAAIKKMRSNKSK------EFFAELKVLCKI--HHI 344
R +G+G FG VY G + G+ E + N+S EF E V+ HH+
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 345 N-------------VFISTFGNGSLSDHL--------HDPLLKGHQPLTWTARTQIALDA 383
V + +G L +L ++P G P T Q+A +
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP---GRPPPTLQEMIQMAAEI 139
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGT 443
A G+ Y++ ++VHR++ N ++ K+ DFG+ + T+ G
Sbjct: 140 ADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK------GG 190
Query: 444 PGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
G LP R+ S+ + TT +D+++FGVVL E+ +
Sbjct: 191 KGLLP--------VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 113/293 (38%), Gaps = 59/293 (20%)
Query: 300 IGRGGFGNVYFGLLGDRE--AAIKKMRSN--KSKEFFAELKVLCKIHHINVF-------- 347
+G G +G VY G+ A+K ++ + + +EF E V+ +I H N+
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 348 ---------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARY 398
T+GN L D+L + Q + +A + +EY+ K +
Sbjct: 327 EPPFYIITEFMTYGN--LLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLE---KKNF 378
Query: 399 VHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFR 458
+HR++ N L+ + KVADFGL +L M G P +
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLSRL--------MTGDTYTAHAGAKFP-------IK 423
Query: 459 FDMHSSVMELQVTTKTDVFAFGVVLAELITGKRA------------LIRDDSEPTKMKSL 506
+ S+ + + K+DV+AFGV+L E+ T + L+ D + +
Sbjct: 424 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC 483
Query: 507 ITIMAAVAEWCLNEDAVDRP---EMRDIVAILSQIMITSTEWEASLGGDSQVF 556
+ + C + DRP E+ + Q S E E LG ++ F
Sbjct: 484 PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKENLYF 536
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 92/225 (40%), Gaps = 54/225 (24%)
Query: 298 RIIGRGGFGNVYFG-----LLGDREAAIKKMRSNKSK------EFFAELKVLCKI--HHI 344
R +G+G FG VY G + G+ E + N+S EF E V+ HH+
Sbjct: 24 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 83
Query: 345 N-------------VFISTFGNGSLSDHL--------HDPLLKGHQPLTWTARTQIALDA 383
V + +G L +L ++P G P T Q+A +
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP---GRPPPTLQEMIQMAAEI 140
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGT 443
A G+ Y++ ++VHR++ N ++ K+ DFG+ + T+ G
Sbjct: 141 ADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK------GG 191
Query: 444 PGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
G LP R+ S+ + TT +D+++FGVVL E+ +
Sbjct: 192 KGLLP--------VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 16/88 (18%)
Query: 399 VHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFR 458
+HRD+K +N+ LD K+ DFGL ++ N A VGTP Y+ PE
Sbjct: 138 LHRDLKPANVFLDGKQNVKLGDFGLARI---LNHDTSFAKTFVGTPYYMSPE-------- 186
Query: 459 FDMHSSVMELQVTTKTDVFAFGVVLAEL 486
+ + K+D+++ G +L EL
Sbjct: 187 -----QMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 91/232 (39%), Gaps = 48/232 (20%)
Query: 292 NNFDESRIIGRGGFGNV----------YFGL-LGDREAAIKK-----------MRSNKSK 329
N F+ +++G+G FG V Y+ + + +E + K + N
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 330 EFFAELKVLCKIHHINVFISTFGNGS-LSDHL-HDPLLKGHQPLTWTARTQIALDAAKGI 387
F LK + H F+ + NG L HL + + + + A ALD
Sbjct: 69 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD----- 123
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYL 447
Y+H ++ V+RD+K N++LD K+ DFGL K E + + GTP YL
Sbjct: 124 -YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKX-FCGTPEYL 177
Query: 448 PPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
PE + + D + GVV+ E++ G+ D E
Sbjct: 178 APEVL-------------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 216
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 16/88 (18%)
Query: 399 VHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFR 458
+HRD+K +N+ LD K+ DFGL ++ N A VGTP Y+ PE
Sbjct: 138 LHRDLKPANVFLDGKQNVKLGDFGLARI---LNHDTSFAKAFVGTPYYMSPE-------- 186
Query: 459 FDMHSSVMELQVTTKTDVFAFGVVLAEL 486
+ + K+D+++ G +L EL
Sbjct: 187 -----QMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 122/304 (40%), Gaps = 74/304 (24%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVY----FGLLGDREA----AIKKMRS----NKSKEFF 332
E+ E NN + +G G FG V FGL G +A A+K ++S ++ +
Sbjct: 31 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGL-GKEDAVLKVAVKMLKSTAHADEKEALM 89
Query: 333 AELKVLCKIHHINVFISTFGN----------------GSLSDHLH-----DPLLKGHQPL 371
+ELK++ + ++ G G L + L D + +PL
Sbjct: 90 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPL 149
Query: 372 TWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTN 431
+ A+G+ ++ +HRD+ N+LL +G AK+ DFGL + + N
Sbjct: 150 ELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR--DIMN 204
Query: 432 EKEMLATRLVGTP-GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAE----- 485
+ + P ++ PE IF + T ++DV+++G++L E
Sbjct: 205 DSNYIVKGNARLPVKWMAPESIF-------------DCVYTVQSDVWSYGILLWEIFSLG 251
Query: 486 -------LITGK-RALIRDDSEPTK----MKSLITIMAAVAEWCLNEDAVDRPEMRDIVA 533
L+ K L++D + + K++ +IM A C + RP + I +
Sbjct: 252 LNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQA----CWALEPTHRPTFQQICS 307
Query: 534 ILSQ 537
L +
Sbjct: 308 FLQE 311
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 107/286 (37%), Gaps = 57/286 (19%)
Query: 265 KENTEDVTVLESERTIIFSLEEIEEATNNFDESRIIGRGGFGNVYFGLLGDREAAIKKMR 324
++N L I+ + ++ ++D ++IGRG FG V R A +K+
Sbjct: 48 RKNKNIDNFLNRYEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLV----RHKASQKVY 103
Query: 325 SNK-----------SKEFFAE-------------LKVLCKIH---HINVFISTFGNGSLS 357
+ K FF E +++ C ++ + + G L
Sbjct: 104 AMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLV 163
Query: 358 DHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAK 417
+ + + + +TA +ALDA + IH RD+K N+LLD K
Sbjct: 164 NLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIH---------RDVKPDNMLLDKHGHLK 214
Query: 418 VADFGLVKLEERTNEKEML-ATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDV 476
+ADFG + +E M+ VGTP Y+ PE + S + + D
Sbjct: 215 LADFGTCM---KMDETGMVHCDTAVGTPDYISPEV---------LKSQGGDGYYGRECDW 262
Query: 477 FAFGVVLAELITGKRALIRDDSEPTKMKSLITIMAAVAEWCLNEDA 522
++ GV L E++ G D T K IM C EDA
Sbjct: 263 WSVGVFLFEMLVGDTPFYADSLVGTYSK----IMDHKNSLCFPEDA 304
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 102/252 (40%), Gaps = 66/252 (26%)
Query: 285 EEIEEATNNFDESR--------IIGRGGFGNVYFGLLGDREA-----AIKKMRSN----- 326
E+ ++ +NN D + ++G+G FG V +L DR+ AIK ++ +
Sbjct: 4 EDRKQPSNNLDRVKLTDFNFLMVLGKGSFGKV---MLADRKGTEELYAIKILKKDVVIQD 60
Query: 327 ----------------KSKEFFAELKVLCKIHHINVFISTFGNG-SLSDHLHD-PLLKGH 368
F +L + F+ + NG L H+ K
Sbjct: 61 DDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEP 120
Query: 369 QPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEE 428
Q + + A I G+ ++H K ++RD+K N++LD K+ADFG+ K
Sbjct: 121 QAVFYAAEISI------GLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCK--- 168
Query: 429 RTNEKEMLATR-LVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELI 487
+ + + TR GTP Y+ PE I + + D +A+GV+L E++
Sbjct: 169 -EHMMDGVTTREFCGTPDYIAPEIIAYQPY-------------GKSVDWWAYGVLLYEML 214
Query: 488 TGKRALIRDDSE 499
G+ +D +
Sbjct: 215 AGQPPFDGEDED 226
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 41/219 (18%)
Query: 292 NNFDESRIIGRGGFGNVYFG--LLGDREAAIKKM------RSNKSKEFFAELKVLCKIHH 343
+F +I+G G F V L RE AIK + + NK E V+ ++ H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 344 ---INVFIS-------TFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAK---GIEYI 390
+ ++ FG LS + LLK + + T A+ +EY+
Sbjct: 97 PFFVKLYFCFQDDEKLYFG---LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 153
Query: 391 HDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPE 450
H +HRD+K NILL++ + ++ DFG K+ K+ A VGT Y+ PE
Sbjct: 154 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVGTAQYVSPE 209
Query: 451 YIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ E +D++A G ++ +L+ G
Sbjct: 210 LL-------------TEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 91/232 (39%), Gaps = 48/232 (20%)
Query: 292 NNFDESRIIGRGGFGNV----------YFGL-LGDREAAIKK-----------MRSNKSK 329
N F+ +++G+G FG V Y+ + + +E + K + N
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 330 EFFAELKVLCKIHHINVFISTFGNGS-LSDHL-HDPLLKGHQPLTWTARTQIALDAAKGI 387
F LK + H F+ + NG L HL + + + + A ALD
Sbjct: 70 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD----- 124
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYL 447
Y+H ++ V+RD+K N++LD K+ DFGL K E + + GTP YL
Sbjct: 125 -YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKX-FCGTPEYL 178
Query: 448 PPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
PE + + D + GVV+ E++ G+ D E
Sbjct: 179 APEVL-------------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 217
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 91/232 (39%), Gaps = 48/232 (20%)
Query: 292 NNFDESRIIGRGGFGNV----------YFGL-LGDREAAIKK-----------MRSNKSK 329
N F+ +++G+G FG V Y+ + + +E + K + N
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 330 EFFAELKVLCKIHHINVFISTFGNGS-LSDHL-HDPLLKGHQPLTWTARTQIALDAAKGI 387
F LK + H F+ + NG L HL + + + + A ALD
Sbjct: 68 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD----- 122
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYL 447
Y+H ++ V+RD+K N++LD K+ DFGL K E + + GTP YL
Sbjct: 123 -YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKX-FCGTPEYL 176
Query: 448 PPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
PE + + D + GVV+ E++ G+ D E
Sbjct: 177 APEVL-------------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 215
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 42/214 (19%)
Query: 298 RIIGRGGFGNV---YFGLLGDREAAIKKMRSNKS----KEFFAELKVLCKIHHINVF--- 347
R +G G +G+V Y L + A K R +S + + EL++L + H NV
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 348 --------ISTFGNGSLSDHLHDPLLKG---HQPLTWTARTQIALDAAKGIEYIHDHTKA 396
I F L L L Q L+ + +G++YIH A
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH---SA 150
Query: 397 RYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKR 456
+HRD+K SN+ +++ ++ DFGL R ++EM T V T Y PE I +
Sbjct: 151 GIIHRDLKPSNVAVNEDSELRILDFGLA----RQADEEM--TGYVATRWYRAPE-IMLNW 203
Query: 457 FRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
++ D+++ G ++AEL+ GK
Sbjct: 204 MHYNQ-----------TVDIWSVGCIMAELLQGK 226
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 44/218 (20%)
Query: 293 NFDESRIIGRGGFGNVYFG--LLGDREAAIK-----KMRSNKSKEFFAELKVLCKIHHIN 345
N+ + IG+G F V +L +E A+K ++ S+ ++ F E+++ ++H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 346 V--------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
+ + + +G + D L+ + AR + ++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGG---EVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCH 130
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEY 451
+ VHRD+K N+LLD K+ADFG E T ++ A G P Y PE
Sbjct: 131 ---QKFIVHRDLKAENLLLDADXNIKIADFGFSN--EFTFGNKLDA--FCGAPPYAAPEL 183
Query: 452 IFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
K++ + DV++ GV+L L++G
Sbjct: 184 FQGKKYD------------GPEVDVWSLGVILYTLVSG 209
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 57/131 (43%), Gaps = 19/131 (14%)
Query: 379 IALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLAT 438
A +G+ Y+H Y+HR++ N+LLD+ K+ DFGL K +E +
Sbjct: 122 FAQQICEGMAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 178
Query: 439 RLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDS 498
+ PE + +F + +DV++FGV L EL+T + S
Sbjct: 179 DGDSPVFWYAPECLKEYKFYY-------------ASDVWSFGVTLYELLTHCDS---SQS 222
Query: 499 EPTKMKSLITI 509
PTK LI I
Sbjct: 223 PPTKFLELIGI 233
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 94/227 (41%), Gaps = 56/227 (24%)
Query: 300 IGRGGFGNVY----FGL---LGDREAAIKKMRS----NKSKEFFAELKVLCKI-HHINVF 347
+GRG FG V FG+ R A+K ++ ++ + +ELK+L I HH+NV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 348 ------------------ISTFGNGSLSDHLHDPLLKGHQP-------LTWTARTQIALD 382
FGN S ++P LT +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 383 AAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVG 442
AKG+E++ + +HRD+ NILL + K+ DFGL + + + + +
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR--DIXKDPDXVRKGDAR 211
Query: 443 TP-GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P ++ PE IF + + T ++DV++FGV+L E+ +
Sbjct: 212 LPLKWMAPETIFDRVY-------------TIQSDVWSFGVLLWEIFS 245
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 56/236 (23%)
Query: 300 IGRGGFGNVYFGLLGD-REAAIKKMRSNKSKE-----FFAELKVLCKIHHINVFISTFGN 353
+G G +G VY R A+K++R + E E+ +L ++HH N+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV------ 82
Query: 354 GSLSDHLHD----------------PLLKGHQPLTWTARTQIAL-DAAKGIEYIHDHTKA 396
SL D +H +L ++ ++ +I L +G+ + H H
Sbjct: 83 -SLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH--- 138
Query: 397 RYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPGYLPPEYIF 453
R +HRD+K N+L++ K+ADFGL + + R+ E++ T Y P+ +
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV------TLWYRAPDVLM 192
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRAL--IRDDSEPTKMKSLI 507
+ + +T D+++ G + AE+ITGK + DD + K+ S++
Sbjct: 193 GSK------------KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSIL 236
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 90/217 (41%), Gaps = 37/217 (17%)
Query: 292 NNFDESRIIGRGGFGNVYFG--LLGDREAAIKKM------RSNKSKEFFAELKVLCKIHH 343
+F +I+G G F L RE AIK + + NK E V+ ++ H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 344 ---INVFISTFGNGS-----LSDHLHDPLLKGHQPLTWTARTQIALDAAK---GIEYIHD 392
+ ++ TF + LS + LLK + + T A+ +EY+H
Sbjct: 90 PFFVKLYF-TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 393 HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
+HRD+K NILL++ + ++ DFG K+ K+ A VGT Y+ PE +
Sbjct: 149 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVGTAQYVSPELL 204
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
E +D++A G ++ +L+ G
Sbjct: 205 -------------TEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 30/199 (15%)
Query: 311 GLLGDREAAIKKMRSNKSKEFFAELKVL--CKIHHINVFISTF-GNGSLS---DHLH--- 361
GL+ R+ +++ + EL+VL C +I F F +G +S +H+
Sbjct: 41 GLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS 100
Query: 362 -DPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVAD 420
D +LK + + ++++ +G+ Y+ + K + +HRD+K SNIL++ K+ D
Sbjct: 101 LDQVLKEAKRIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCD 158
Query: 421 FGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFG 480
FG+ + +A VGT Y+ PE + H SV ++D+++ G
Sbjct: 159 FGV-----SGQLIDSMANSFVGTRSYMAPERL------QGTHYSV-------QSDIWSMG 200
Query: 481 VVLAELITGKRALIRDDSE 499
+ L EL G+ + D++
Sbjct: 201 LSLVELAVGRYPIPPPDAK 219
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 67/159 (42%), Gaps = 31/159 (19%)
Query: 354 GSLSDHLHDPLLKGHQPLTWTARTQIALDAAK---GIEYIHDHTKARYVHRDIKTSNILL 410
GSL D+L P Q+ L A + G+ Y+H Y+HR++ N+LL
Sbjct: 103 GSLRDYL---------PRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRNLAARNVLL 150
Query: 411 DDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQV 470
D+ K+ DFGL K +E + + PE + +F +
Sbjct: 151 DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYY----------- 199
Query: 471 TTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSLITI 509
+DV++FGV L EL+T + S PTK LI I
Sbjct: 200 --ASDVWSFGVTLYELLTHCDS---SQSPPTKFLELIGI 233
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 122/304 (40%), Gaps = 74/304 (24%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVY----FGLLGDREA----AIKKMRS----NKSKEFF 332
E+ E NN + +G G FG V FGL G +A A+K ++S ++ +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGL-GKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 333 AELKVLCKIHHINVFISTFGN----------------GSLSDHLH-----DPLLKGHQPL 371
+ELK++ + ++ G G L + L D + +PL
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPL 157
Query: 372 TWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTN 431
+ A+G+ ++ +HRD+ N+LL +G AK+ DFGL + + N
Sbjct: 158 ELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR--DIMN 212
Query: 432 EKEMLATRLVGTP-GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAE----- 485
+ + P ++ PE IF + T ++DV+++G++L E
Sbjct: 213 DSNYIVKGNARLPVKWMAPESIF-------------DCVYTVQSDVWSYGILLWEIFSLG 259
Query: 486 -------LITGK-RALIRDDSEPTK----MKSLITIMAAVAEWCLNEDAVDRPEMRDIVA 533
L+ K L++D + + K++ +IM A C + RP + I +
Sbjct: 260 LNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQA----CWALEPTHRPTFQQICS 315
Query: 534 ILSQ 537
L +
Sbjct: 316 FLQE 319
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 110/262 (41%), Gaps = 62/262 (23%)
Query: 267 NTEDVTVLESERTIIFSLEEIEEATNNFDESRIIGRGGFGNVY----FGL---LGDREAA 319
+ +++ + E + + + E + + + +GRG FG V FG+ R A
Sbjct: 2 DPDELPLDEHCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVA 61
Query: 320 IKKMRS----NKSKEFFAELKVLCKI-HHINVF------------------ISTFGNGSL 356
+K ++ ++ + +ELK+L I HH+NV FGN L
Sbjct: 62 VKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN--L 119
Query: 357 SDHL---------HDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSN 407
S +L + L K LT + AKG+E++ + +HRD+ N
Sbjct: 120 STYLRSKRNEFVPYKDLYKDF--LTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARN 174
Query: 408 ILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDMHSSVM 466
ILL + K+ DFGL + + + + + P ++ PE IF + +
Sbjct: 175 ILLSEKNVVKICDFGLAR--DIYKDPDYVRKGDARLPLKWMAPETIFDRVY--------- 223
Query: 467 ELQVTTKTDVFAFGVVLAELIT 488
T ++DV++FGV+L E+ +
Sbjct: 224 ----TIQSDVWSFGVLLWEIFS 241
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 53/231 (22%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYFGLLGDREAAI------KKMRSNKSKEFFAELKVL 338
++ E+ + +D ++G G F V + + KK K E+ VL
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVL 70
Query: 339 CKIHHINV---------------FISTFGNGSLSDHLHDPLLKGHQPLTWTAR--TQIAL 381
KI H N+ + G L D + + KG +T R +++
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKGF----YTERDASRLIF 123
Query: 382 DAAKGIEYIHDHTKARYVHRDIKTSNIL---LDDGLRAKVADFGLVKLEERTNEKEMLAT 438
++Y+HD VHRD+K N+L LD+ + ++DFGL K+E+ + +L+T
Sbjct: 124 QVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLST 177
Query: 439 RLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
GTPGY+ PE + K + + D ++ GV+ L+ G
Sbjct: 178 -ACGTPGYVAPEVLAQKPY-------------SKAVDCWSIGVIAYILLCG 214
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 110/262 (41%), Gaps = 62/262 (23%)
Query: 267 NTEDVTVLESERTIIFSLEEIEEATNNFDESRIIGRGGFGNVY----FGL---LGDREAA 319
+ +++ + E + + + E + + + +GRG FG V FG+ R A
Sbjct: 2 DPDELPLDEHCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVA 61
Query: 320 IKKMRS----NKSKEFFAELKVLCKI-HHINVF------------------ISTFGNGSL 356
+K ++ ++ + +ELK+L I HH+NV FGN L
Sbjct: 62 VKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN--L 119
Query: 357 SDHL---------HDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSN 407
S +L + L K LT + AKG+E++ + +HRD+ N
Sbjct: 120 STYLRSKRNEFVPYKDLYKDF--LTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARN 174
Query: 408 ILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDMHSSVM 466
ILL + K+ DFGL + + + + + P ++ PE IF + +
Sbjct: 175 ILLSEKNVVKIXDFGLAR--DIYKDPDYVRKGDARLPLKWMAPETIFDRVY--------- 223
Query: 467 ELQVTTKTDVFAFGVVLAELIT 488
T ++DV++FGV+L E+ +
Sbjct: 224 ----TIQSDVWSFGVLLWEIFS 241
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 118/289 (40%), Gaps = 66/289 (22%)
Query: 290 ATNNF---DESRIIGRGGFGNVY------FGLLGDREAAIKKMRSNKSKEFFA-ELKVLC 339
A N+F ++ I+G G FG V+ GL A I K R K KE E+ V+
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGL--KLAAKIIKTRGMKDKEEVKNEISVMN 141
Query: 340 KIHHIN--------------VFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAK 385
++ H N V + + +G L D ++ LT +
Sbjct: 142 QLDHANLIQLYDAFESKNDIVLVMEYVDGG---ELFDRIIDESYNLTELDTILFMKQICE 198
Query: 386 GIEYIHDHTKARYVHRDIKTSNILL--DDGLRAKVADFGLVKLEERTNEKEMLATRLVGT 443
GI ++H + +H D+K NIL D + K+ DFGL + R +E L GT
Sbjct: 199 GIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLAR---RYKPREKLKVNF-GT 251
Query: 444 PGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKM 503
P +L PE + +D V+ TD+++ GV+ L++G + D+ T
Sbjct: 252 PEFLAPEVV-----NYDF--------VSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET-- 296
Query: 504 KSLITIMAAVAEWCLNEDAVDRPEMRDIV----AILSQIMITSTEWEAS 548
L I+A W L ++ E +DI +S+++I W S
Sbjct: 297 --LNNILA--CRWDLEDE-----EFQDISEEAKEFISKLLIKEKSWRIS 336
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 56/236 (23%)
Query: 300 IGRGGFGNVYFGLLGD-REAAIKKMRSNKSKE-----FFAELKVLCKIHHINVFISTFGN 353
+G G +G VY R A+K++R + E E+ +L ++HH N+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV------ 82
Query: 354 GSLSDHLHD----------------PLLKGHQPLTWTARTQIAL-DAAKGIEYIHDHTKA 396
SL D +H +L ++ ++ +I L +G+ + H H
Sbjct: 83 -SLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH--- 138
Query: 397 RYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLVGTPGYLPPEYIF 453
R +HRD+K N+L++ K+ADFGL + + R+ E++ T Y P+ +
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV------TLWYRAPDVLM 192
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRAL--IRDDSEPTKMKSLI 507
+ + +T D+++ G + AE+ITGK + DD + K+ S++
Sbjct: 193 GSK------------KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSIL 236
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 45/213 (21%)
Query: 299 IIGRGGFGNVYF--GLLGDREAAIKKMR--SNKSKE---FFAELKVLCKIHHINVF---- 347
++G+G FG V + +E A+K + S K+K+ E+++L K+ H N+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 348 ----ISTF---GNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
S+F G L D ++K + + +I GI Y+H H VH
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIK-RKRFSEHDAARIIKQVFSGITYMHKHN---IVH 144
Query: 401 RDIKTSNILLDDGLRA---KVADFGLVK-LEERTNEKEMLATRLVGTPGYLPPEYIFVKR 456
RD+K NILL+ + K+ DFGL ++ T K+ +GT Y+ PE V R
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR-----IGTAYYIAPE---VLR 196
Query: 457 FRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+D K DV++ GV+L L++G
Sbjct: 197 GTYD-----------EKCDVWSAGVILYILLSG 218
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 104/268 (38%), Gaps = 65/268 (24%)
Query: 298 RIIGRGGFGNVYFG--LLGDREAAIKKMRSNKSKEFFAELKVLCKIH----HINV----- 346
R++ GGF VY + RE A+K++ SN+ ++ A ++ +C + H N+
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCS 93
Query: 347 -----------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEY 389
++ G L + L ++ PL+ +I + +++
Sbjct: 94 AASIGKEESDTGQAEFLLLTELCKGQLVEFLKK--MESRGPLSCDTVLKIFYQTCRAVQH 151
Query: 390 IHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLV-------- 441
+H K +HRD+K N+LL + K+ DFG + A R
Sbjct: 152 MH-RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITR 210
Query: 442 -GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVL---------------AE 485
TP Y PE I D++S+ + K D++A G +L
Sbjct: 211 NTTPMYRTPEII-------DLYSN---FPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR 260
Query: 486 LITGKRALIRDDSEPTKMKSLITIMAAV 513
++ GK ++ D++ T SLI M V
Sbjct: 261 IVNGKYSIPPHDTQYTVFHSLIRAMLQV 288
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 42/231 (18%)
Query: 284 LEEIEEATNNFDESRIIGRGGFGNVYFGLLGDREAAIKKMRSNKSKEFFAELKVLCKIHH 343
++E++ +F+ ++IGRG FG V + + E I M+ E + C
Sbjct: 66 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTER-IYAMKILNKWEMLKRAETACFREE 124
Query: 344 INVFIS------TFGNGSLSDHLHDPLLK----GHQPLTWTARTQIAL--DAAK------ 385
+V ++ T + + D H L+ G LT ++ + L D A+
Sbjct: 125 RDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEM 184
Query: 386 --GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFG-LVKLEERTNEKEMLATRLVG 442
I+ IH + YVHRDIK N+LLD ++ADFG +K+ + + +A VG
Sbjct: 185 VLAIDSIH---QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA---VG 238
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMEL---QVTTKTDVFAFGVVLAELITGK 490
TP Y+ PE + ME + + D ++ GV + E++ G+
Sbjct: 239 TPDYISPEIL-----------QAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 118/296 (39%), Gaps = 65/296 (21%)
Query: 283 SLEEIEEATNNFDESRIIGRGGFGNVYFGLLGDRE-----AAIKKMRSNKS----KEFFA 333
S + E + R IG G FG+V+ G+ E AIK ++ S ++F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 334 ELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
E + + H ++ I + + L + ++ + +LD A I Y +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPVWIIME--LCTLGELRSFLQVRKFSLDLASLILYAY 118
Query: 392 DHTKA-------RYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGT 443
+ A R+VHRDI N+L+ K+ DFGL + +E+ T K A++
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXK---ASKGKLP 175
Query: 444 PGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELI---------------- 487
++ PE I +RF T+ +DV+ FGV + E++
Sbjct: 176 IKWMAPESINFRRF-------------TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
Query: 488 ----TGKRALIRDDSEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIM 539
G+R + + PT + SL+T C D RP ++ A LS I+
Sbjct: 223 GRIENGERLPMPPNCPPT-LYSLMTK-------CWAYDPSRRPRFTELKAQLSTIL 270
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 26/108 (24%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLD----DGLRAKVADFGLVKLEERTNEKEMLATRLV 441
G+ Y+H H VHRD+K N+LL+ D L K+ DFGL + E N+K+M +
Sbjct: 148 GVTYLHKHN---IVHRDLKPENLLLESKEKDAL-IKIVDFGLSAVFE--NQKKM--KERL 199
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
GT Y+ PE V R ++D K DV++ GV+L L+ G
Sbjct: 200 GTAYYIAPE---VLRKKYD-----------EKCDVWSIGVILFILLAG 233
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 45/213 (21%)
Query: 299 IIGRGGFGNVYF--GLLGDREAAIKKMR--SNKSKE---FFAELKVLCKIHHINVFI--- 348
++G+G FG V + +E A+K + S K+K+ E+++L K+ H N+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 349 -----STF---GNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
S+F G L D ++K + + +I GI Y+H H VH
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIK-RKRFSEHDAARIIKQVFSGITYMHKHN---IVH 144
Query: 401 RDIKTSNILLDDGLR---AKVADFGLVK-LEERTNEKEMLATRLVGTPGYLPPEYIFVKR 456
RD+K NILL+ + K+ DFGL ++ T K+ +GT Y+ PE V R
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR-----IGTAYYIAPE---VLR 196
Query: 457 FRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+D K DV++ GV+L L++G
Sbjct: 197 GTYD-----------EKCDVWSAGVILYILLSG 218
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 49/217 (22%)
Query: 298 RIIGRGGFGNVYFGLLGDREAAIK-----KMRSNKS--KEFFA----------------- 333
+++G G FG V+ G+ +IK K+ +KS + F A
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 334 ELKVLCKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
L LC + + GSL DH+ H L L W + AKG+ Y+
Sbjct: 97 RLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW------GVQIAKGMYYLE 150
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEY 451
+H VHR++ N+LL + +VADFG+ L ++K++L + P ++
Sbjct: 151 EHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLP-PDDKQLLYSE-----AKTPIKW 201
Query: 452 IFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ ++ F + T ++DV+++GV + EL+T
Sbjct: 202 MALESIHFGKY--------THQSDVWSYGVTVWELMT 230
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 61/147 (41%), Gaps = 28/147 (19%)
Query: 380 ALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATR 439
A + +EY+H ++RD+K NILLD K+ DFG K +
Sbjct: 112 AAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD------VTYX 162
Query: 440 LVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
L GTP Y+ PE + K + D ++FG+++ E++ G ++
Sbjct: 163 LCGTPDYIAPEVVSTKPY-------------NKSIDWWSFGILIYEMLAGYTPFYDSNT- 208
Query: 500 PTKMKSLITIMAAVAEW--CLNEDAVD 524
MK+ I+ A + NED D
Sbjct: 209 ---MKTYEKILNAELRFPPFFNEDVKD 232
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 45/213 (21%)
Query: 299 IIGRGGFGNVYF--GLLGDREAAIKKMR--SNKSKE---FFAELKVLCKIHHINVF---- 347
++G+G FG V + +E A+K + S K+K+ E+++L K+ H N+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 348 ----ISTF---GNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
S+F G L D ++K + + +I GI Y+H H VH
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIK-RKRFSEHDAARIIKQVFSGITYMHKHN---IVH 144
Query: 401 RDIKTSNILLDDGLR---AKVADFGLVK-LEERTNEKEMLATRLVGTPGYLPPEYIFVKR 456
RD+K NILL+ + K+ DFGL ++ T K+ +GT Y+ PE V R
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR-----IGTAYYIAPE---VLR 196
Query: 457 FRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+D K DV++ GV+L L++G
Sbjct: 197 GTYD-----------EKCDVWSAGVILYILLSG 218
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 44/221 (19%)
Query: 291 TNNFDESRIIGRGGFGNVYF--GLLGDREAAIKKMRSNKSKE------FFAELKVLCKIH 342
++ + R++G+G FG V + +E A+K + + K+ E+++L ++
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 343 HINV-----------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
H N+ + G L D ++ + + +I GI Y+H
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVDAARIIRQVLSGITYMH 149
Query: 392 DHTKARYVHRDIKTSNILLDDGLR---AKVADFGLVKLEERTNEKEMLATRLVGTPGYLP 448
K + VHRD+K N+LL+ + ++ DFGL E + K+M +GT Y+
Sbjct: 150 ---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS--KKMKDK--IGTAYYIA 202
Query: 449 PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
PE +H + E K DV++ GV+L L++G
Sbjct: 203 PEV---------LHGTYDE-----KCDVWSTGVILYILLSG 229
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 112/286 (39%), Gaps = 51/286 (17%)
Query: 292 NNFDESRIIGRGGFGNVYFGLLGDREA--AIKKM------RSNKSKEFFAELKVLCKIHH 343
++F ++IG+G FG V E A+K + + + K +E VL K
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 344 INVFISTFGNGSLSDHLHDPL--LKGHQPLTWTARTQIALDA---------AKGIEYIHD 392
+ + +D L+ L + G + R + L+ A + Y+H
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHS 157
Query: 393 HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
V+RD+K NILLD + DFGL K E + GTP YL PE
Sbjct: 158 ---LNIVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCGTPEYLAPE-- 209
Query: 453 FVKRFRFDMHSSVMELQVTTKT-DVFAFGVVLAELITG-------KRALIRDD--SEPTK 502
V+ Q +T D + G VL E++ G A + D+ ++P +
Sbjct: 210 ------------VLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQ 257
Query: 503 MKSLITIMAA-VAEWCLNEDAVDRPEMR-DIVAILSQIMITSTEWE 546
+K IT A + E L +D R + D + I S + + W+
Sbjct: 258 LKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWD 303
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 25/153 (16%)
Query: 338 LCKIHHINVFISTFGNGSLSDHL--HDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTK 395
LC + + GSL DH+ H L L W + AKG+ Y+ +H
Sbjct: 83 LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW------GVQIAKGMYYLEEHG- 135
Query: 396 ARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVK 455
VHR++ N+LL + +VADFG+ L ++K++L + P +++ ++
Sbjct: 136 --MVHRNLAARNVLLKSPSQVQVADFGVADLLP-PDDKQLLYSE-----AKTPIKWMALE 187
Query: 456 RFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
F + T ++DV+++GV + EL+T
Sbjct: 188 SIHFGKY--------THQSDVWSYGVTVWELMT 212
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 124/310 (40%), Gaps = 80/310 (25%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVY----FGLLGDREA----AIKKMRS----NKSKEFF 332
E+ E NN + +G G FG V FGL G +A A+K ++S ++ +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGL-GKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 333 AELKVLCKIHHINVFISTFGN----------------GSLSDHL-----------HDPLL 365
+ELK++ + ++ G G L + L ++P
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSH 157
Query: 366 KGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK 425
+ L+ + A+G+ ++ +HRD+ N+LL +G AK+ DFGL +
Sbjct: 158 NPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 214
Query: 426 LEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLA 484
+ N+ + P ++ PE IF + T ++DV+++G++L
Sbjct: 215 --DIMNDSNYIVKGNARLPVKWMAPESIF-------------DCVYTVQSDVWSYGILLW 259
Query: 485 E------------LITGK-RALIRDDSEPTK----MKSLITIMAAVAEWCLNEDAVDRPE 527
E L+ K L++D + + K++ +IM A W L + RP
Sbjct: 260 EIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQAC--WAL--EPTHRPT 315
Query: 528 MRDIVAILSQ 537
+ I + L +
Sbjct: 316 FQQICSFLQE 325
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 42/231 (18%)
Query: 284 LEEIEEATNNFDESRIIGRGGFGNVYFGLLGDREAAIKKMRSNKSKEFFAELKVLCKIHH 343
++E++ +F+ ++IGRG FG V + + E I M+ E + C
Sbjct: 82 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTER-IYAMKILNKWEMLKRAETACFREE 140
Query: 344 INVFIS------TFGNGSLSDHLHDPLLK----GHQPLTWTARTQIAL--DAAK------ 385
+V ++ T + + D H L+ G LT ++ + L D A+
Sbjct: 141 RDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEM 200
Query: 386 --GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFG-LVKLEERTNEKEMLATRLVG 442
I+ IH + YVHRDIK N+LLD ++ADFG +K+ + + +A VG
Sbjct: 201 VLAIDSIH---QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA---VG 254
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMEL---QVTTKTDVFAFGVVLAELITGK 490
TP Y+ PE + ME + + D ++ GV + E++ G+
Sbjct: 255 TPDYISPEIL-----------QAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 39/171 (22%)
Query: 292 NNFDESRIIGRGGFGNVY--FGLLGDREAAIKKMRSNKSK--EFFAELKVLCKIHHINV- 346
++F+E ++G+G FG V L R AIKK+R + K +E+ +L ++H V
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVV 65
Query: 347 -----------FI---------STF-------GNGSLSDHLHDPLLKGHQPLTWTARTQI 379
F+ ST N +L D +H L + W QI
Sbjct: 66 RYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQI 125
Query: 380 ALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERT 430
+ + YIH +HR++K NI +D+ K+ DFGL K R+
Sbjct: 126 L----EALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRS 169
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 18/102 (17%)
Query: 399 VHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATR-LVGTPGYLPPEYIFVKRF 457
++RD+K N++LD K+ADFG+ K N + + T+ GTP Y+ PE I + +
Sbjct: 464 IYRDLKLDNVMLDSEGHIKIADFGMCK----ENIWDGVTTKXFCGTPDYIAPEIIAYQPY 519
Query: 458 RFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
D +AFGV+L E++ G+ +D +
Sbjct: 520 -------------GKSVDWWAFGVLLYEMLAGQAPFEGEDED 548
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 110/263 (41%), Gaps = 61/263 (23%)
Query: 267 NTEDVTVLESERTIIFSLEEIEEATNNFDESRIIGRGGFGNVY----FGLLGD---REAA 319
+ +++ + E + + + E + + + +GRG FG V FG+ R A
Sbjct: 3 DPDELPLDEHCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVA 62
Query: 320 IKKMRS----NKSKEFFAELKVLCKI-HHINVF------------------ISTFGNGSL 356
+K ++ ++ + +ELK+L I HH+NV FGN L
Sbjct: 63 VKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN--L 120
Query: 357 SDHLH---DPLLKGHQP-------LTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTS 406
S +L + + P LT + AKG+E++ + +HRD+
Sbjct: 121 STYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAAR 177
Query: 407 NILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDMHSSV 465
NILL + K+ DFGL + + + + + P ++ PE IF + +
Sbjct: 178 NILLSEKNVVKICDFGLAR--DIXKDPDXVRKGDARLPLKWMAPETIFDRVY-------- 227
Query: 466 MELQVTTKTDVFAFGVVLAELIT 488
T ++DV++FGV+L E+ +
Sbjct: 228 -----TIQSDVWSFGVLLWEIFS 245
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 99/231 (42%), Gaps = 30/231 (12%)
Query: 275 ESERTIIFSLEEIEEATNNFDESRIIGRGGFGNVYFGL----LGDREAAIKKMRSNKSKE 330
++ +T IF L+E + + +IG+G FG VY G + R I++ ++ K
Sbjct: 17 KASQTSIF-LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKA 75
Query: 331 FFAELKVLCKIHHINVFISTFGNGSLS-DHLH--DPLLKGHQPLTWTARTQIALDA---- 383
F E+ + H NV + F +S HL L KG + +I LD
Sbjct: 76 FKREVMAYRQTRHENVVL--FMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTR 133
Query: 384 ------AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEE--RTNEKEM 435
KG+ Y+H +H+D+K+ N+ D+G + + DFGL + + +E
Sbjct: 134 QIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRRED 189
Query: 436 LATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
G +L PE I ++ D +L + +DVFA G + EL
Sbjct: 190 KLRIQNGWLCHLAPEII--RQLSPDTEED--KLPFSKHSDVFALGTIWYEL 236
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 111/275 (40%), Gaps = 45/275 (16%)
Query: 284 LEEIEEATNNFDESRIIGRGGFGNVYFGLL--GDREAAIKKMRSNKSKEFFAELKVLCKI 341
++E E + + ++G GGFG+VY G+ + AIK + ++ ++ EL ++
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRV 59
Query: 342 HHINVFISTFGNG-----SLSDHLHDP-----LLKGHQPLT-----WTARTQIALDAAKG 386
V + +G L D P +L+ +P+ T R + + A+
Sbjct: 60 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 119
Query: 387 -----IEYIHDHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEKEMLATRL 440
+E + +HRDIK NIL+D + K+ DFG L K+ + T
Sbjct: 120 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL-----LKDTVYTDF 174
Query: 441 VGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDD--- 497
GT Y PPE+I R+ V++ G++L +++ G D+
Sbjct: 175 DGTRVYSPPEWIRYHRYH------------GRSAAVWSLGILLYDMVCGDIPFEHDEEII 222
Query: 498 -SEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDI 531
+ + + + + WCL DRP +I
Sbjct: 223 RGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 44/221 (19%)
Query: 291 TNNFDESRIIGRGGFGNVYF--GLLGDREAAIKKMRSNKSKE------FFAELKVLCKIH 342
++ + R++G+G FG V + +E A+K + + K+ E+++L ++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 343 HINV-----------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
H N+ + G L D ++ + + +I GI Y+H
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVDAARIIRQVLSGITYMH 143
Query: 392 DHTKARYVHRDIKTSNILLDDGLRA---KVADFGLVKLEERTNEKEMLATRLVGTPGYLP 448
K + VHRD+K N+LL+ + ++ DFGL E + K+M +GT Y+
Sbjct: 144 ---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS--KKMKDK--IGTAYYIA 196
Query: 449 PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
PE +H + E K DV++ GV+L L++G
Sbjct: 197 PEV---------LHGTYDE-----KCDVWSTGVILYILLSG 223
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 120/316 (37%), Gaps = 80/316 (25%)
Query: 267 NTEDVTVLESERTIIFSLEEIEEATNNFDESRIIGRGGFGNVYFGLLGDRE-----AAIK 321
+ ED + S R E IE R IG G FG+V+ G+ E AIK
Sbjct: 372 DEEDTYTMPSTRDYEIQRERIELG-------RCIGEGQFGDVHQGIYMSPENPAMAVAIK 424
Query: 322 KMRSNKS----KEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGHQPLTWTA 375
++ S ++F E + + H ++ I + + L + ++
Sbjct: 425 TCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIME--LCTLGELRSFLQ 482
Query: 376 RTQIALDAAKGIEYIHDHTKA-------RYVHRDIKTSNILLDDGLRAKVADFGLVKLEE 428
+ +LD A I Y + + A R+VHRDI N+L+ K+ DFGL + E
Sbjct: 483 VRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542
Query: 429 RTNEKEMLATRLVGTPGYLP-----PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVL 483
+ T + G LP PE I +RF T+ +DV+ FGV +
Sbjct: 543 DS-------TYYKASKGKLPIKWMAPESINFRRF-------------TSASDVWMFGVCM 582
Query: 484 AELI--------------------TGKRALIRDDSEPTKMKSLITIMAAVAEWCLNEDAV 523
E++ G+R + + PT + SL+T C D
Sbjct: 583 WEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPT-LYSLMTK-------CWAYDPS 634
Query: 524 DRPEMRDIVAILSQIM 539
RP ++ A LS I+
Sbjct: 635 RRPRFTELKAQLSTIL 650
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 104/258 (40%), Gaps = 52/258 (20%)
Query: 290 ATNNFDESRIIGRGGFGNVYFGLL---GDREAAIKKMRSN-------------------- 326
+NF+ R++G+G FG V + GD A+K ++ +
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDL-YAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 327 -KSKEFFAELKVLCKIHHINVFISTFGNG-SLSDHLHDPLLKGHQPLTWTARTQIALDAA 384
++ F +L + F+ F NG L H+ K + AR A +
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQ----KSRRFDEARARF-YAAEII 134
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
+ ++HD ++RD+K N+LLD K+ADFG+ K E AT GTP
Sbjct: 135 SALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTAT-FCGTP 188
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMK 504
Y+ PE + E+ D +A GV+L E++ G A ++E +
Sbjct: 189 DYIAPEIL-------------QEMLYGPAVDWWAMGVLLYEMLCG-HAPFEAENEDDLFE 234
Query: 505 SLITIMAAVAEWCLNEDA 522
+++ W L+EDA
Sbjct: 235 AILNDEVVYPTW-LHEDA 251
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 115/300 (38%), Gaps = 73/300 (24%)
Query: 283 SLEEIEEATNNFDESRIIGRGGFGNVYFGLLGDRE-----AAIKKMRSNKS----KEFFA 333
S + E + R IG G FG+V+ G+ E AIK ++ S ++F
Sbjct: 29 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 88
Query: 334 ELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
E + + H ++ I + + L + ++ + +LD A I Y +
Sbjct: 89 EALTMRQFDHPHIVKLIGVITENPVWIIME--LCTLGELRSFLQVRKYSLDLASLILYAY 146
Query: 392 DHTKA-------RYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
+ A R+VHRDI N+L+ K+ DFGL + E + T +
Sbjct: 147 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-------TYYKASK 199
Query: 445 GYLP-----PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELI------------ 487
G LP PE I +RF T+ +DV+ FGV + E++
Sbjct: 200 GKLPIKWMAPESINFRRF-------------TSASDVWMFGVCMWEILMHGVKPFQGVKN 246
Query: 488 --------TGKRALIRDDSEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIM 539
G+R + + PT + SL+T C D RP ++ A LS I+
Sbjct: 247 NDVIGRIENGERLPMPPNCPPT-LYSLMTK-------CWAYDPSRRPRFTELKAQLSTIL 298
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 115/300 (38%), Gaps = 73/300 (24%)
Query: 283 SLEEIEEATNNFDESRIIGRGGFGNVYFGLLGDRE-----AAIKKMRSNKS----KEFFA 333
S + E + R IG G FG+V+ G+ E AIK ++ S ++F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 334 ELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
E + + H ++ I + + L + ++ + +LD A I Y +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPVWIIME--LCTLGELRSFLQVRKYSLDLASLILYAY 118
Query: 392 DHTKA-------RYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
+ A R+VHRDI N+L+ K+ DFGL + E + T +
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-------TYYKASK 171
Query: 445 GYLP-----PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELI------------ 487
G LP PE I +RF T+ +DV+ FGV + E++
Sbjct: 172 GKLPIKWMAPESINFRRF-------------TSASDVWMFGVCMWEILMHGVKPFQGVKN 218
Query: 488 --------TGKRALIRDDSEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIM 539
G+R + + PT + SL+T C D RP ++ A LS I+
Sbjct: 219 NDVIGRIENGERLPMPPNCPPT-LYSLMTK-------CWAYDPSRRPRFTELKAQLSTIL 270
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 115/300 (38%), Gaps = 73/300 (24%)
Query: 283 SLEEIEEATNNFDESRIIGRGGFGNVYFGLLGDRE-----AAIKKMRSNKS----KEFFA 333
S + E + R IG G FG+V+ G+ E AIK ++ S ++F
Sbjct: 6 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 65
Query: 334 ELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
E + + H ++ I + + L + ++ + +LD A I Y +
Sbjct: 66 EALTMRQFDHPHIVKLIGVITENPVWIIME--LCTLGELRSFLQVRKYSLDLASLILYAY 123
Query: 392 DHTKA-------RYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
+ A R+VHRDI N+L+ K+ DFGL + E + T +
Sbjct: 124 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-------TYYKASK 176
Query: 445 GYLP-----PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELI------------ 487
G LP PE I +RF T+ +DV+ FGV + E++
Sbjct: 177 GKLPIKWMAPESINFRRF-------------TSASDVWMFGVCMWEILMHGVKPFQGVKN 223
Query: 488 --------TGKRALIRDDSEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIM 539
G+R + + PT + SL+T C D RP ++ A LS I+
Sbjct: 224 NDVIGRIENGERLPMPPNCPPT-LYSLMTK-------CWAYDPSRRPRFTELKAQLSTIL 275
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 115/300 (38%), Gaps = 73/300 (24%)
Query: 283 SLEEIEEATNNFDESRIIGRGGFGNVYFGLLGDRE-----AAIKKMRSNKS----KEFFA 333
S + E + R IG G FG+V+ G+ E AIK ++ S ++F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 60
Query: 334 ELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
E + + H ++ I + + L + ++ + +LD A I Y +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPVWIIME--LCTLGELRSFLQVRKYSLDLASLILYAY 118
Query: 392 DHTKA-------RYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
+ A R+VHRDI N+L+ K+ DFGL + E + T +
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-------TYYKASK 171
Query: 445 GYLP-----PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELI------------ 487
G LP PE I +RF T+ +DV+ FGV + E++
Sbjct: 172 GKLPIKWMAPESINFRRF-------------TSASDVWMFGVCMWEILMHGVKPFQGVKN 218
Query: 488 --------TGKRALIRDDSEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIM 539
G+R + + PT + SL+T C D RP ++ A LS I+
Sbjct: 219 NDVIGRIENGERLPMPPNCPPT-LYSLMTK-------CWAYDPSRRPRFTELKAQLSTIL 270
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 53/231 (22%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYFGLLGDREAAI------KKMRSNKSKEFFAELKVL 338
++ E+ + +D ++G G F V + + K+ K E+ VL
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 339 CKIHHINV---------------FISTFGNGSLSDHLHDPLLKGHQPLTWTAR--TQIAL 381
KI H N+ + G L D + + KG +T R +++
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKGF----YTERDASRLIF 123
Query: 382 DAAKGIEYIHDHTKARYVHRDIKTSNIL---LDDGLRAKVADFGLVKLEERTNEKEMLAT 438
++Y+HD VHRD+K N+L LD+ + ++DFGL K+E+ + +L+T
Sbjct: 124 QVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLST 177
Query: 439 RLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
GTPGY+ PE + K + + D ++ GV+ L+ G
Sbjct: 178 A-CGTPGYVAPEVLAQKPY-------------SKAVDCWSIGVIAYILLCG 214
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 122/308 (39%), Gaps = 78/308 (25%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVY----FGLLGDREA----AIKKMRS----NKSKEFF 332
E+ E NN + +G G FG V FGL G +A A+K ++S ++ +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGL-GKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 333 AELKVLCKIHHINVFISTFGN----------------GSLSDHLH--------DPLLK-G 367
+ELK++ + ++ G G L + L DP
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIA 157
Query: 368 HQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLE 427
+ L+ + A+G+ ++ +HRD+ N+LL +G AK+ DFGL +
Sbjct: 158 NSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-- 212
Query: 428 ERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAE- 485
+ N+ + P ++ PE IF + T ++DV+++G++L E
Sbjct: 213 DIMNDSNYIVKGNARLPVKWMAPESIF-------------DCVYTVQSDVWSYGILLWEI 259
Query: 486 -----------LITGK-RALIRDDSEPTK----MKSLITIMAAVAEWCLNEDAVDRPEMR 529
L+ K L++D + + K++ +IM A C + RP +
Sbjct: 260 FSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQA----CWALEPTHRPTFQ 315
Query: 530 DIVAILSQ 537
I + L +
Sbjct: 316 QICSFLQE 323
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 111/285 (38%), Gaps = 73/285 (25%)
Query: 298 RIIGRGGFGNVYFGLLGDRE-----AAIKKMRSNKS----KEFFAELKVLCKIHHINV-- 346
R IG G FG+V+ G+ E AIK ++ S ++F E + + H ++
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 347 FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKA-------RYV 399
I + + L + ++ + +LD A I Y + + A R+V
Sbjct: 73 LIGVITENPVWIIME--LCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV 130
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLP-----PEYIFV 454
HRDI N+L+ K+ DFGL + E + T + G LP PE I
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-------TYYKASKGKLPIKWMAPESINF 183
Query: 455 KRFRFDMHSSVMELQVTTKTDVFAFGVVLAELI--------------------TGKRALI 494
+RF T+ +DV+ FGV + E++ G+R +
Sbjct: 184 RRF-------------TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM 230
Query: 495 RDDSEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIM 539
+ PT + SL+T C D RP ++ A LS I+
Sbjct: 231 PPNCPPT-LYSLMTK-------CWAYDPSRRPRFTELKAQLSTIL 267
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 18/102 (17%)
Query: 399 VHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATR-LVGTPGYLPPEYIFVKRF 457
++RD+K N++LD K+ADFG+ K N + + T+ GTP Y+ PE I + +
Sbjct: 143 IYRDLKLDNVMLDSEGHIKIADFGMCK----ENIWDGVTTKXFCGTPDYIAPEIIAYQPY 198
Query: 458 RFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSE 499
D +AFGV+L E++ G+ +D +
Sbjct: 199 -------------GKSVDWWAFGVLLYEMLAGQAPFEGEDED 227
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 53/231 (22%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYFGLLGDREAAI------KKMRSNKSKEFFAELKVL 338
++ E+ + +D ++G G F V + + K+ K E+ VL
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 339 CKIHHINV---------------FISTFGNGSLSDHLHDPLLKGHQPLTWTAR--TQIAL 381
KI H N+ + G L D + + KG +T R +++
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKGF----YTERDASRLIF 123
Query: 382 DAAKGIEYIHDHTKARYVHRDIKTSNIL---LDDGLRAKVADFGLVKLEERTNEKEMLAT 438
++Y+HD VHRD+K N+L LD+ + ++DFGL K+E+ + +L+T
Sbjct: 124 QVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLST 177
Query: 439 RLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
GTPGY+ PE + K + + D ++ GV+ L+ G
Sbjct: 178 -ACGTPGYVAPEVLAQKPY-------------SKAVDCWSIGVIAYILLCG 214
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 19/121 (15%)
Query: 369 QPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LE 427
+P+T + A+G+E++ + + +HRD+ NILL + K+ DFGL + +
Sbjct: 194 EPITMEDLISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIY 250
Query: 428 ERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELI 487
+ + TRL ++ PE IF K + +TK+DV+++GV+L E+
Sbjct: 251 KNPDYVRKGDTRL--PLKWMAPESIFDKIY-------------STKSDVWSYGVLLWEIF 295
Query: 488 T 488
+
Sbjct: 296 S 296
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 115/300 (38%), Gaps = 73/300 (24%)
Query: 283 SLEEIEEATNNFDESRIIGRGGFGNVYFGLLGDRE-----AAIKKMRSNKS----KEFFA 333
S + E + R IG G FG+V+ G+ E AIK ++ S ++F
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 62
Query: 334 ELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
E + + H ++ I + + L + ++ + +LD A I Y +
Sbjct: 63 EALTMRQFDHPHIVKLIGVITENPVWIIME--LCTLGELRSFLQVRKYSLDLASLILYAY 120
Query: 392 DHTKA-------RYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
+ A R+VHRDI N+L+ K+ DFGL + E + T +
Sbjct: 121 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-------TYYKASK 173
Query: 445 GYLP-----PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELI------------ 487
G LP PE I +RF T+ +DV+ FGV + E++
Sbjct: 174 GKLPIKWMAPESINFRRF-------------TSASDVWMFGVCMWEILMHGVKPFQGVKN 220
Query: 488 --------TGKRALIRDDSEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIM 539
G+R + + PT + SL+T C D RP ++ A LS I+
Sbjct: 221 NDVIGRIENGERLPMPPNCPPT-LYSLMTK-------CWAYDPSRRPRFTELKAQLSTIL 272
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 53/231 (22%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYFGLLGDREAAI------KKMRSNKSKEFFAELKVL 338
++ E+ + +D ++G G F V + + K+ K E+ VL
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 339 CKIHHINV---------------FISTFGNGSLSDHLHDPLLKGHQPLTWTAR--TQIAL 381
KI H N+ + G L D + + KG +T R +++
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKGF----YTERDASRLIF 123
Query: 382 DAAKGIEYIHDHTKARYVHRDIKTSNIL---LDDGLRAKVADFGLVKLEERTNEKEMLAT 438
++Y+HD VHRD+K N+L LD+ + ++DFGL K+E+ + +L+T
Sbjct: 124 QVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLST 177
Query: 439 RLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
GTPGY+ PE + K + + D ++ GV+ L+ G
Sbjct: 178 -ACGTPGYVAPEVLAQKPY-------------SKAVDCWSIGVIAYILLCG 214
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 111/275 (40%), Gaps = 45/275 (16%)
Query: 284 LEEIEEATNNFDESRIIGRGGFGNVYFGLL--GDREAAIKKMRSNKSKEFFAELKVLCKI 341
++E E + + ++G GGFG+VY G+ + AIK + ++ ++ EL ++
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRV 59
Query: 342 HHINVFISTFGNG-----SLSDHLHDP-----LLKGHQPLT-----WTARTQIALDAAKG 386
V + +G L D P +L+ +P+ T R + + A+
Sbjct: 60 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 119
Query: 387 -----IEYIHDHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEKEMLATRL 440
+E + +HRDIK NIL+D + K+ DFG L K+ + T
Sbjct: 120 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL-----LKDTVYTDF 174
Query: 441 VGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDD--- 497
GT Y PPE+I R+ V++ G++L +++ G D+
Sbjct: 175 DGTRVYSPPEWIRYHRYH------------GRSAAVWSLGILLYDMVCGDIPFEHDEEII 222
Query: 498 -SEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDI 531
+ + + + + WCL DRP +I
Sbjct: 223 RGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 44/221 (19%)
Query: 291 TNNFDESRIIGRGGFGNVYF--GLLGDREAAIKKMRSNKSKE------FFAELKVLCKIH 342
++ + R++G+G FG V + +E A+K + + K+ E+++L ++
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 343 HINV-----------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
H N+ + G L D ++ + + +I GI Y+H
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVDAARIIRQVLSGITYMH 166
Query: 392 DHTKARYVHRDIKTSNILLDDGLRA---KVADFGLVKLEERTNEKEMLATRLVGTPGYLP 448
K + VHRD+K N+LL+ + ++ DFGL E + K+M +GT Y+
Sbjct: 167 ---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS--KKMKDK--IGTAYYIA 219
Query: 449 PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
PE +H + E K DV++ GV+L L++G
Sbjct: 220 PEV---------LHGTYDE-----KCDVWSTGVILYILLSG 246
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 115/300 (38%), Gaps = 73/300 (24%)
Query: 283 SLEEIEEATNNFDESRIIGRGGFGNVYFGLLGDRE-----AAIKKMRSNKS----KEFFA 333
S + E + R IG G FG+V+ G+ E AIK ++ S ++F
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 63
Query: 334 ELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
E + + H ++ I + + L + ++ + +LD A I Y +
Sbjct: 64 EALTMRQFDHPHIVKLIGVITENPVWIIME--LCTLGELRSFLQVRKYSLDLASLILYAY 121
Query: 392 DHTKA-------RYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
+ A R+VHRDI N+L+ K+ DFGL + E + T +
Sbjct: 122 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-------TYYKASK 174
Query: 445 GYLP-----PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELI------------ 487
G LP PE I +RF T+ +DV+ FGV + E++
Sbjct: 175 GKLPIKWMAPESINFRRF-------------TSASDVWMFGVCMWEILMHGVKPFQGVKN 221
Query: 488 --------TGKRALIRDDSEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIM 539
G+R + + PT + SL+T C D RP ++ A LS I+
Sbjct: 222 NDVIGRIENGERLPMPPNCPPT-LYSLMTK-------CWAYDPSRRPRFTELKAQLSTIL 273
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 22/108 (20%)
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDD---GLRAKVADFGLVKLEERTNEKEMLATRLV 441
+ + +IH H VHRD+K N+LL G K+ADFGL +E + ++
Sbjct: 141 ESVNHIHQHD---IVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFG--FA 194
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
GTPGYL PE + R D + D++A GV+L L+ G
Sbjct: 195 GTPGYLSPEVL-----RKDPYGK--------PVDIWACGVILYILLVG 229
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 24/107 (22%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDG---LRAKVADFGLVKLEERTNEKEMLATRLVG 442
GI Y+H H VHRDIK NILL++ L K+ DFGL + + L RL G
Sbjct: 158 GICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK---LRDRL-G 210
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
T Y+ PE V++ + K DV++ GV++ L+ G
Sbjct: 211 TAYYIAPE--------------VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 111/275 (40%), Gaps = 45/275 (16%)
Query: 284 LEEIEEATNNFDESRIIGRGGFGNVYFGLL--GDREAAIKKMRSNKSKEFFAELKVLCKI 341
++E E + + ++G GGFG+VY G+ + AIK + ++ ++ EL ++
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRV 59
Query: 342 HHINVFISTFGNG-----SLSDHLHDP-----LLKGHQPLT-----WTARTQIALDAAKG 386
V + +G L D P +L+ +P+ T R + + A+
Sbjct: 60 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 119
Query: 387 -----IEYIHDHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEKEMLATRL 440
+E + +HRDIK NIL+D + K+ DFG L K+ + T
Sbjct: 120 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL-----LKDTVYTDF 174
Query: 441 VGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDD--- 497
GT Y PPE+I R+ V++ G++L +++ G D+
Sbjct: 175 DGTRVYSPPEWIRYHRYH------------GRSAAVWSLGILLYDMVCGDIPFEHDEEII 222
Query: 498 -SEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDI 531
+ + + + + WCL DRP +I
Sbjct: 223 RGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 44/221 (19%)
Query: 291 TNNFDESRIIGRGGFGNVYF--GLLGDREAAIKKMRSNKSKE------FFAELKVLCKIH 342
++ + R++G+G FG V + +E A+K + + K+ E+++L ++
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 343 HINV-----------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
H N+ + G L D ++ + + +I GI Y+H
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVDAARIIRQVLSGITYMH 167
Query: 392 DHTKARYVHRDIKTSNILLDDGLRA---KVADFGLVKLEERTNEKEMLATRLVGTPGYLP 448
K + VHRD+K N+LL+ + ++ DFGL E + K+M +GT Y+
Sbjct: 168 ---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS--KKMKDK--IGTAYYIA 220
Query: 449 PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
PE +H + E K DV++ GV+L L++G
Sbjct: 221 PEV---------LHGTYDE-----KCDVWSTGVILYILLSG 247
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 41/214 (19%)
Query: 266 ENTEDVTVLESERTIIFSL-EEIEEATNNFDESRIIGRGGFGNVYFGLLGDRE----AAI 320
E+ E V + E + + + EE+ AT+ +GRG FG V+ + D++ A+
Sbjct: 51 EDNEGVLLTEKLKPVDYEYREEVHWATHQLR----LGRGSFGEVH--RMEDKQTGFQCAV 104
Query: 321 KKMRSNKSKEFFAELKVLC----------------KIHHINVFISTFGNGSLSDHLHDPL 364
KK+R + F AE + C + +N+F+ GSL L
Sbjct: 105 KKVRL---EVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ-----L 156
Query: 365 LKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILL-DDGLRAKVADFG- 422
+K L A +G+EY+H R +H D+K N+LL DG A + DFG
Sbjct: 157 VKEQGCLPEDRALYYLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGH 213
Query: 423 LVKLEERTNEKEMLATRLV-GTPGYLPPEYIFVK 455
V L+ K++L + GT ++ PE + +
Sbjct: 214 AVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGR 247
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 110/274 (40%), Gaps = 45/274 (16%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYFGLL--GDREAAIKKMRSNKSKEFFAELKVLCKIH 342
+E E + + ++G GGFG+VY G+ + AIK + ++ ++ EL ++
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVP 88
Query: 343 HINVFISTFGNG-----SLSDHLHDP-----LLKGHQPLT-----WTARTQIALDAAKG- 386
V + +G L D P +L+ +P+ T R + + A+
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 387 ----IEYIHDHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEKEMLATRLV 441
+E + +HRDIK NIL+D + K+ DFG L K+ + T
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL-----LKDTVYTDFD 203
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDD---- 497
GT Y PPE+I R+ V++ G++L +++ G D+
Sbjct: 204 GTRVYSPPEWIRYHRYH------------GRSAAVWSLGILLYDMVCGDIPFEHDEEIIG 251
Query: 498 SEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDI 531
+ + + + + WCL DRP +I
Sbjct: 252 GQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 62/231 (26%)
Query: 300 IGRGGFGNVY----FGLLGD---REAAIKKMRS----NKSKEFFAELKVLCKI-HHINVF 347
+GRG FG V FG+ R A+K ++ ++ + +ELK+L I HH+NV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 348 ---------------ISTFGN-GSLSDHLH-------------DPLLKGHQPLTWTARTQ 378
I+ F G+LS +L + L K LT
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF--LTLEHLIC 143
Query: 379 IALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLAT 438
+ AKG+E++ + +HRD+ NILL + K+ DFGL + + + + +
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIXKDPDXVRK 198
Query: 439 RLVGTP-GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P ++ PE IF + + T ++DV++FGV+L E+ +
Sbjct: 199 GDARLPLKWMAPETIFDRVY-------------TIQSDVWSFGVLLWEIFS 236
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 110/274 (40%), Gaps = 45/274 (16%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYFGLL--GDREAAIKKMRSNKSKEFFAELKVLCKIH 342
+E E + + ++G GGFG+VY G+ + AIK + ++ ++ EL ++
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVP 88
Query: 343 HINVFISTFGNG-----SLSDHLHDP-----LLKGHQPLT-----WTARTQIALDAAKG- 386
V + +G L D P +L+ +P+ T R + + A+
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 387 ----IEYIHDHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEKEMLATRLV 441
+E + +HRDIK NIL+D + K+ DFG L K+ + T
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL-----LKDTVYTDFD 203
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDD---- 497
GT Y PPE+I R+ V++ G++L +++ G D+
Sbjct: 204 GTRVYSPPEWIRYHRYH------------GRSAAVWSLGILLYDMVCGDIPFEHDEEIIG 251
Query: 498 SEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDI 531
+ + + + + WCL DRP +I
Sbjct: 252 GQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 110/274 (40%), Gaps = 45/274 (16%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYFGLL--GDREAAIKKMRSNKSKEFFAELKVLCKIH 342
+E E + + ++G GGFG+VY G+ + AIK + ++ ++ EL ++
Sbjct: 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVP 94
Query: 343 HINVFISTFGNG-----SLSDHLHDP-----LLKGHQPLT-----WTARTQIALDAAKG- 386
V + +G L D P +L+ +P+ T R + + A+
Sbjct: 95 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 154
Query: 387 ----IEYIHDHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEKEMLATRLV 441
+E + +HRDIK NIL+D + K+ DFG L K+ + T
Sbjct: 155 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL-----LKDTVYTDFD 209
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDD---- 497
GT Y PPE+I R+ V++ G++L +++ G D+
Sbjct: 210 GTRVYSPPEWIRYHRYH------------GRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 257
Query: 498 SEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDI 531
+ + + + + WCL DRP +I
Sbjct: 258 GQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 291
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 110/274 (40%), Gaps = 45/274 (16%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYFGLL--GDREAAIKKMRSNKSKEFFAELKVLCKIH 342
+E E + + ++G GGFG+VY G+ + AIK + ++ ++ EL ++
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVP 102
Query: 343 HINVFISTFGNG-----SLSDHLHDP-----LLKGHQPLT-----WTARTQIALDAAKG- 386
V + +G L D P +L+ +P+ T R + + A+
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 387 ----IEYIHDHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEKEMLATRLV 441
+E + +HRDIK NIL+D + K+ DFG L K+ + T
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL-----LKDTVYTDFD 217
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDD---- 497
GT Y PPE+I R+ V++ G++L +++ G D+
Sbjct: 218 GTRVYSPPEWIRYHRYH------------GRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 265
Query: 498 SEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDI 531
+ + + + + WCL DRP +I
Sbjct: 266 GQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 299
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 110/274 (40%), Gaps = 45/274 (16%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYFGLL--GDREAAIKKMRSNKSKEFFAELKVLCKIH 342
+E E + + ++G GGFG+VY G+ + AIK + ++ ++ EL ++
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVP 75
Query: 343 HINVFISTFGNG-----SLSDHLHDP-----LLKGHQPLT-----WTARTQIALDAAKG- 386
V + +G L D P +L+ +P+ T R + + A+
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 387 ----IEYIHDHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEKEMLATRLV 441
+E + +HRDIK NIL+D + K+ DFG L K+ + T
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL-----LKDTVYTDFD 190
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDD---- 497
GT Y PPE+I R+ V++ G++L +++ G D+
Sbjct: 191 GTRVYSPPEWIRYHRYH------------GRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 238
Query: 498 SEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDI 531
+ + + + + WCL DRP +I
Sbjct: 239 GQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 272
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 110/274 (40%), Gaps = 45/274 (16%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYFGLL--GDREAAIKKMRSNKSKEFFAELKVLCKIH 342
+E E + + ++G GGFG+VY G+ + AIK + ++ ++ EL ++
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVP 87
Query: 343 HINVFISTFGNG-----SLSDHLHDP-----LLKGHQPLT-----WTARTQIALDAAKG- 386
V + +G L D P +L+ +P+ T R + + A+
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 387 ----IEYIHDHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEKEMLATRLV 441
+E + +HRDIK NIL+D + K+ DFG L K+ + T
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL-----LKDTVYTDFD 202
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDD---- 497
GT Y PPE+I R+ V++ G++L +++ G D+
Sbjct: 203 GTRVYSPPEWIRYHRYH------------GRSAAVWSLGILLYDMVCGDIPFEHDEEIIG 250
Query: 498 SEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDI 531
+ + + + + WCL DRP +I
Sbjct: 251 GQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 62/231 (26%)
Query: 300 IGRGGFGNVY----FGLLGD---REAAIKKMRS----NKSKEFFAELKVLCKI-HHINVF 347
+GRG FG V FG+ R A+K ++ ++ + +ELK+L I HH+NV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 348 ---------------ISTFGN-GSLSDHLH-------------DPLLKGHQPLTWTARTQ 378
I+ F G+LS +L + L K LT
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF--LTLEHLIC 143
Query: 379 IALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLAT 438
+ AKG+E++ + +HRD+ NILL + K+ DFGL + + + + +
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVRK 198
Query: 439 RLVGTP-GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P ++ PE IF + + T ++DV++FGV+L E+ +
Sbjct: 199 GDARLPLKWMAPETIFDRVY-------------TIQSDVWSFGVLLWEIFS 236
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 46/222 (20%)
Query: 291 TNNFDESRIIGRGGFGNVYF--GLLGDREAAIKKMRSNKSKE------FFAELKVLCKIH 342
++ + R++G+G FG V + +E A+K + + K+ E+++L ++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 343 HINV-----------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
H N+ + G L D ++ + + +I GI Y H
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVDAARIIRQVLSGITYXH 143
Query: 392 DHTKARYVHRDIKTSNILLDDGLRA---KVADFGL-VKLEERTNEKEMLATRLVGTPGYL 447
K + VHRD+K N+LL+ + ++ DFGL E K+ +GT Y+
Sbjct: 144 ---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK-----IGTAYYI 195
Query: 448 PPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
PE +H + E K DV++ GV+L L++G
Sbjct: 196 APEV---------LHGTYDE-----KCDVWSTGVILYILLSG 223
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 110/274 (40%), Gaps = 45/274 (16%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYFGLL--GDREAAIKKMRSNKSKEFFAELKVLCKIH 342
+E E + + ++G GGFG+VY G+ + AIK + ++ ++ EL ++
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVP 74
Query: 343 HINVFISTFGNG-----SLSDHLHDP-----LLKGHQPLT-----WTARTQIALDAAKG- 386
V + +G L D P +L+ +P+ T R + + A+
Sbjct: 75 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 387 ----IEYIHDHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEKEMLATRLV 441
+E + +HRDIK NIL+D + K+ DFG L K+ + T
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL-----LKDTVYTDFD 189
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDD---- 497
GT Y PPE+I R+ V++ G++L +++ G D+
Sbjct: 190 GTRVYSPPEWIRYHRYH------------GRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 237
Query: 498 SEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDI 531
+ + + + + WCL DRP +I
Sbjct: 238 GQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 271
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 22/125 (17%)
Query: 373 WTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNE 432
+TA +ALDA + +IH RD+K N+LLD K+ADFG + N+
Sbjct: 178 YTAEVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCM---KMNK 225
Query: 433 KEML-ATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKR 491
+ M+ VGTP Y+ PE + S + + D ++ GV L E++ G
Sbjct: 226 EGMVRCDTAVGTPDYISPEV---------LKSQGGDGYYGRECDWWSVGVFLYEMLVGDT 276
Query: 492 ALIRD 496
D
Sbjct: 277 PFYAD 281
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 36/207 (17%)
Query: 300 IGRGGFGNVYFGLL--GDREAAIKKMRS----NKSKEFFAELKVLCKIHHINVFISTFGN 353
IGRG FG V+ G L + A+K R + +F E ++L + H N+ + G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNI-VRLIGV 180
Query: 354 GSLSDHLH--DPLLKGHQPLTWT----ART------QIALDAAKGIEYIHDHTKARYVHR 401
+ ++ L++G LT+ AR Q+ DAA G+EY+ +HR
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHR 237
Query: 402 DIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDM 461
D+ N L+ + K++DFG+ + E R V + PE + R+
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPV-KWTAPEALNYGRY---- 292
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELIT 488
++++DV++FG++L E +
Sbjct: 293 ---------SSESDVWSFGILLWETFS 310
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 62/231 (26%)
Query: 300 IGRGGFGNVY----FGLLGD---REAAIKKMRS----NKSKEFFAELKVLCKI-HHINVF 347
+GRG FG V FG+ R A+K ++ ++ + +ELK+L I HH+NV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 348 ---------------ISTFGN-GSLSDHLH-------------DPLLKGHQPLTWTARTQ 378
I+ F G+LS +L + L K LT
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF--LTLEHLIC 143
Query: 379 IALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLAT 438
+ AKG+E++ + +HRD+ NILL + K+ DFGL + + + + +
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVRK 198
Query: 439 RLVGTP-GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P ++ PE IF + + T ++DV++FGV+L E+ +
Sbjct: 199 GDARLPLKWMAPETIFDRVY-------------TIQSDVWSFGVLLWEIFS 236
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 22/125 (17%)
Query: 373 WTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNE 432
+TA +ALDA + +IH RD+K N+LLD K+ADFG + N+
Sbjct: 178 YTAEVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCM---KMNK 225
Query: 433 KEML-ATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKR 491
+ M+ VGTP Y+ PE + S + + D ++ GV L E++ G
Sbjct: 226 EGMVRCDTAVGTPDYISPEV---------LKSQGGDGYYGRECDWWSVGVFLYEMLVGDT 276
Query: 492 ALIRD 496
D
Sbjct: 277 PFYAD 281
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 115/300 (38%), Gaps = 73/300 (24%)
Query: 283 SLEEIEEATNNFDESRIIGRGGFGNVYFGLLGDRE-----AAIKKMRSNKS----KEFFA 333
S + E + R IG G FG+V+ G+ E AIK ++ S ++F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 334 ELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIH 391
E + + H ++ I + + L + ++ + +LD A I Y +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPVWIIME--LCTLGELRSFLQVRKFSLDLASLILYAY 118
Query: 392 DHTKA-------RYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
+ A R+VHRDI N+L+ K+ DFGL + E + T +
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDS-------TYYKASK 171
Query: 445 GYLP-----PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELI------------ 487
G LP PE I +RF T+ +DV+ FGV + E++
Sbjct: 172 GKLPIKWMAPESINFRRF-------------TSASDVWMFGVCMWEILMHGVKPFQGVKN 218
Query: 488 --------TGKRALIRDDSEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIM 539
G+R + + PT + SL+T C D RP ++ A LS I+
Sbjct: 219 NDVIGRIENGERLPMPPNCPPT-LYSLMTK-------CWAYDPSRRPRFTELKAQLSTIL 270
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 22/125 (17%)
Query: 373 WTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNE 432
+TA +ALDA + +IH RD+K N+LLD K+ADFG + N+
Sbjct: 173 YTAEVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCM---KMNK 220
Query: 433 KEML-ATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKR 491
+ M+ VGTP Y+ PE + S + + D ++ GV L E++ G
Sbjct: 221 EGMVRCDTAVGTPDYISPEV---------LKSQGGDGYYGRECDWWSVGVFLYEMLVGDT 271
Query: 492 ALIRD 496
D
Sbjct: 272 PFYAD 276
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 110/274 (40%), Gaps = 45/274 (16%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYFGLL--GDREAAIKKMRSNKSKEFFAELKVLCKIH 342
+E E + + ++G GGFG+VY G+ + AIK + ++ ++ EL ++
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVP 87
Query: 343 HINVFISTFGNG-----SLSDHLHDP-----LLKGHQPLT-----WTARTQIALDAAKG- 386
V + +G L D P +L+ +P+ T R + + A+
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 387 ----IEYIHDHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEKEMLATRLV 441
+E + +HRDIK NIL+D + K+ DFG L K+ + T
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL-----LKDTVYTDFD 202
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDD---- 497
GT Y PPE+I R+ V++ G++L +++ G D+
Sbjct: 203 GTRVYSPPEWIRYHRYH------------GRSAAVWSLGILLYDMVCGDIPFEHDEEIIG 250
Query: 498 SEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDI 531
+ + + + + WCL DRP +I
Sbjct: 251 GQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 62/231 (26%)
Query: 300 IGRGGFGNVY----FGLLGD---REAAIKKMRS----NKSKEFFAELKVLCKI-HHINVF 347
+GRG FG V FG+ R A+K ++ ++ + +ELK+L I HH+NV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 348 ------------------ISTFGNGSLSDHLHD------PLLKGHQPL-----TWTARTQ 378
FGN LS +L P + + L T
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGN--LSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLIC 154
Query: 379 IALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLAT 438
+ AKG+E++ + +HRD+ NILL + K+ DFGL + + + + +
Sbjct: 155 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVRK 209
Query: 439 RLVGTP-GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P ++ PE IF + + T ++DV++FGV+L E+ +
Sbjct: 210 GDARLPLKWMAPETIFDRVY-------------TIQSDVWSFGVLLWEIFS 247
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 111/278 (39%), Gaps = 51/278 (18%)
Query: 284 LEEIEEATNNFDESRIIGRGGFGNVYFGLL--GDREAAIKKMRSNKSKEFFAELKVLCKI 341
++E E + + ++G GGFG+VY G+ + AIK + ++ ++ EL ++
Sbjct: 23 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRV 81
Query: 342 HHINVFISTFGNG-----SLSDHLHDP-----LLKGHQPLT-----WTARTQIALDAAKG 386
V + +G L D P +L+ +P+ T R + + A+
Sbjct: 82 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 141
Query: 387 -----IEYIHDHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEKEMLATRL 440
+E + +HRDIK NIL+D + K+ DFG L K+ + T
Sbjct: 142 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL-----LKDTVYTDF 196
Query: 441 VGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEP 500
GT Y PPE+I R+ V++ G++L +++ G D+
Sbjct: 197 DGTRVYSPPEWIRYHRYH------------GRSAAVWSLGILLYDMVCGDIPFEHDEE-- 242
Query: 501 TKMKSLITIMAAVA-------EWCLNEDAVDRPEMRDI 531
++ + V+ WCL DRP +I
Sbjct: 243 -IIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 279
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 110/274 (40%), Gaps = 45/274 (16%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYFGLL--GDREAAIKKMRSNKSKEFFAELKVLCKIH 342
+E E + + ++G GGFG+VY G+ + AIK + ++ ++ EL ++
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVP 87
Query: 343 HINVFISTFGNG-----SLSDHLHDP-----LLKGHQPLT-----WTARTQIALDAAKG- 386
V + +G L D P +L+ +P+ T R + + A+
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 387 ----IEYIHDHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEKEMLATRLV 441
+E + +HRDIK NIL+D + K+ DFG L K+ + T
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL-----LKDTVYTDFD 202
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDD---- 497
GT Y PPE+I R+ V++ G++L +++ G D+
Sbjct: 203 GTRVYSPPEWIRYHRYH------------GRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 250
Query: 498 SEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDI 531
+ + + + + WCL DRP +I
Sbjct: 251 GQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 395 KARYVHRDIKTSNILLDDGLRAKVADFGL-VKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
K VHRD+K NILLDD + K+ DFG +L+ +E + GTP YL PE I
Sbjct: 129 KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE-----VCGTPSYLAPEIIE 183
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
D H + D+++ GV++ L+ G
Sbjct: 184 CS--MNDNHPG-----YGKEVDMWSTGVIMYTLLAG 212
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 84/223 (37%), Gaps = 53/223 (23%)
Query: 292 NNFDESRIIGRGGFGNVYFGLLGDRE--AAIKKM-RSNKSKE-----FFAELKVLCKIHH 343
++FD R +G+G FGNVY + A+K + +S KE E+++ + H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 344 INVFISTFGNGSLSDHLHD-----------------PLLKGHQPLTWTARTQIALDAAKG 386
N+ + ++ HD L+ H + A
Sbjct: 75 PNIL-------RMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADA 127
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+ Y H+ + +HRDIK N+L+ K+ADFG + + + GT Y
Sbjct: 128 LHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWS-----VHAPSLRRRXMCGTLDY 179
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
LPPE I K K D++ GV+ E + G
Sbjct: 180 LPPEMIEGKTH-------------DEKVDLWCAGVLCYEFLVG 209
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 44/238 (18%)
Query: 276 SERTIIFSLEEIEEAT----NNFDESRIIGRGGFGNVY--FGLLGDREAAIKKM-----R 324
S+R F EI ++T + + IG G G V + + +R AIKK+
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQN 63
Query: 325 SNKSKEFFAELKVLCKIHHINV--FISTFG-NGSLSDHLHDPLLKGHQPLTWTARTQIAL 381
+K + EL ++ ++H N+ ++ F SL + ++ + Q+ L
Sbjct: 64 QTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMEL 123
Query: 382 DAAK----------GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTN 431
D + GI+++H A +HRD+K SNI++ K+ DFGL RT
Sbjct: 124 DHERMSYLLYQMLVGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLA----RTA 176
Query: 432 EKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ T V T Y PE I ++ D+++ GV++ E+I G
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYK-------------ENVDIWSVGVIMGEMIKG 221
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 97/233 (41%), Gaps = 66/233 (28%)
Query: 300 IGRGGFGNVY----FGLLGD---REAAIKKMRS----NKSKEFFAELKVLCKI-HHINVF 347
+GRG FG V FG+ R A+K ++ ++ + +ELK+L I HH+NV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 348 ------------------ISTFGNGSLSDHLH-------------DPLLKGHQPLTWTAR 376
FGN LS +L + L K LT
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGN--LSTYLRSKRNEFVPYKVAPEDLYKDF--LTLEHL 150
Query: 377 TQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEML 436
+ AKG+E++ + +HRD+ NILL + K+ DFGL + + + + +
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIXKDPDXV 205
Query: 437 ATRLVGTP-GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P ++ PE IF + + T ++DV++FGV+L E+ +
Sbjct: 206 RKGDARLPLKWMAPETIFDRVY-------------TIQSDVWSFGVLLWEIFS 245
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 120/316 (37%), Gaps = 80/316 (25%)
Query: 267 NTEDVTVLESERTIIFSLEEIEEATNNFDESRIIGRGGFGNVYFGLLGDRE-----AAIK 321
+ ED + S R E IE R IG G FG+V+ G+ E AIK
Sbjct: 372 DEEDTYTMPSTRDYEIQRERIELG-------RCIGEGQFGDVHQGIYMSPENPAMAVAIK 424
Query: 322 KMRSNKS----KEFFAELKVLCKIHHINV--FISTFGNGSLSDHLHDPLLKGHQPLTWTA 375
++ S ++F E + + H ++ I + + L + ++
Sbjct: 425 TCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIME--LCTLGELRSFLQ 482
Query: 376 RTQIALDAAKGIEYIHDHTKA-------RYVHRDIKTSNILLDDGLRAKVADFGLVKLEE 428
+ +LD A I Y + + A R+VHRDI N+L+ K+ DFGL + E
Sbjct: 483 VRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYME 542
Query: 429 RTNEKEMLATRLVGTPGYLP-----PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVL 483
+ T + G LP PE I +RF T+ +DV+ FGV +
Sbjct: 543 DS-------TYYKASKGKLPIKWMAPESINFRRF-------------TSASDVWMFGVCM 582
Query: 484 AELI--------------------TGKRALIRDDSEPTKMKSLITIMAAVAEWCLNEDAV 523
E++ G+R + + PT + SL+T C D
Sbjct: 583 WEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPT-LYSLMTK-------CWAYDPS 634
Query: 524 DRPEMRDIVAILSQIM 539
RP ++ A LS I+
Sbjct: 635 RRPRFTELKAQLSTIL 650
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 395 KARYVHRDIKTSNILLDDGLRAKVADFGL-VKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
K VHRD+K NILLDD + K+ DFG +L+ +E + GTP YL PE I
Sbjct: 142 KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE-----VCGTPSYLAPEIIE 196
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
D H + D+++ GV++ L+ G
Sbjct: 197 CS--MNDNHPG-----YGKEVDMWSTGVIMYTLLAG 225
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 88/226 (38%), Gaps = 43/226 (19%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYFG--LLGDREAAIKKMRSNKSKEFFAELKV----- 337
++ +E ++ IG GGF V +L AIK M N +K
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEAL 62
Query: 338 -------LCKIHH-------INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDA 383
+C+++H I + + G L D++ L+ +
Sbjct: 63 KNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYI-----ISQDRLSEEETRVVFRQI 117
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGT 443
+ Y+H Y HRD+K N+L D+ + K+ DFGL + + N+ L T G+
Sbjct: 118 VSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHLQT-CCGS 172
Query: 444 PGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
Y PE I K + + ++ DV++ G++L L+ G
Sbjct: 173 LAYAAPELIQGKSY------------LGSEADVWSMGILLYVLMCG 206
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 84/223 (37%), Gaps = 53/223 (23%)
Query: 292 NNFDESRIIGRGGFGNVYFGLLGDRE--AAIKKM-RSNKSKE-----FFAELKVLCKIHH 343
++FD R +G+G FGNVY + A+K + +S KE E+++ + H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 344 INVFISTFGNGSLSDHLHD-----------------PLLKGHQPLTWTARTQIALDAAKG 386
N+ + ++ HD L+ H + A
Sbjct: 74 PNIL-------RMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADA 126
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+ Y H+ + +HRDIK N+L+ K+ADFG + + + GT Y
Sbjct: 127 LHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWS-----VHAPSLRRRXMCGTLDY 178
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
LPPE I K K D++ GV+ E + G
Sbjct: 179 LPPEMIEGKTH-------------DEKVDLWCAGVLCYEFLVG 208
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 110/274 (40%), Gaps = 45/274 (16%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYFGLL--GDREAAIKKMRSNKSKEFFAELKVLCKIH 342
+E E + + ++G GGFG+VY G+ + AIK + ++ ++ EL ++
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVP 59
Query: 343 HINVFISTFGNG-----SLSDHLHDP-----LLKGHQPLT-----WTARTQIALDAAKG- 386
V + +G L D P +L+ +P+ T R + + A+
Sbjct: 60 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSF 119
Query: 387 ----IEYIHDHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEKEMLATRLV 441
+E + +HRDIK NIL+D + K+ DFG L K+ + T
Sbjct: 120 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL-----LKDTVYTDFD 174
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDD---- 497
GT Y PPE+I R+ V++ G++L +++ G D+
Sbjct: 175 GTRVYSPPEWIRYHRYH------------GRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 222
Query: 498 SEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDI 531
+ + + + + WCL DRP +I
Sbjct: 223 GQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 110/274 (40%), Gaps = 45/274 (16%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYFGLL--GDREAAIKKMRSNKSKEFFAELKVLCKIH 342
+E E + + ++G GGFG+VY G+ + AIK + ++ ++ EL ++
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVP 59
Query: 343 HINVFISTFGNG-----SLSDHLHDP-----LLKGHQPLT-----WTARTQIALDAAKG- 386
V + +G L D P +L+ +P+ T R + + A+
Sbjct: 60 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 119
Query: 387 ----IEYIHDHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEKEMLATRLV 441
+E + +HRDIK NIL+D + K+ DFG L K+ + T
Sbjct: 120 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL-----LKDTVYTDFD 174
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDD---- 497
GT Y PPE+I R+ V++ G++L +++ G D+
Sbjct: 175 GTRVYSPPEWIRYHRYH------------GRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 222
Query: 498 SEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDI 531
+ + + + + WCL DRP +I
Sbjct: 223 GQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 97/233 (41%), Gaps = 66/233 (28%)
Query: 300 IGRGGFGNVY----FGLLGD---REAAIKKMRS----NKSKEFFAELKVLCKI-HHINVF 347
+GRG FG V FG+ R A+K ++ ++ + +ELK+L I HH+NV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 348 ------------------ISTFGNGSLSDHLH-------------DPLLKGHQPLTWTAR 376
FGN LS +L + L K LT
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGN--LSTYLRSKRNEFVPYKVAPEDLYKDF--LTLEHL 141
Query: 377 TQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEML 436
+ AKG+E++ + +HRD+ NILL + K+ DFGL + + + + +
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIXKDPDXV 196
Query: 437 ATRLVGTP-GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P ++ PE IF + + T ++DV++FGV+L E+ +
Sbjct: 197 RKGDARLPLKWMAPETIFDRVY-------------TIQSDVWSFGVLLWEIFS 236
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 97/233 (41%), Gaps = 66/233 (28%)
Query: 300 IGRGGFGNVY----FGLLGD---REAAIKKMRS----NKSKEFFAELKVLCKI-HHINVF 347
+GRG FG V FG+ R A+K ++ ++ + +ELK+L I HH+NV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 348 ------------------ISTFGNGSLSDHLH-------------DPLLKGHQPLTWTAR 376
FGN LS +L + L K LT
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGN--LSTYLRSKRNEFVPYKVAPEDLYKDF--LTLEHL 150
Query: 377 TQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEML 436
+ AKG+E++ + +HRD+ NILL + K+ DFGL + + + + +
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDXV 205
Query: 437 ATRLVGTP-GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P ++ PE IF + + T ++DV++FGV+L E+ +
Sbjct: 206 RKGDARLPLKWMAPETIFDRVY-------------TIQSDVWSFGVLLWEIFS 245
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 100/239 (41%), Gaps = 46/239 (19%)
Query: 276 SERTIIFSLEEIEEAT----NNFDESRIIGRGGFGNV---YFGLLGDREAAIKKM----- 323
S+R F EI ++T + + IG G G V Y +L +R AIKK+
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL-ERNVAIKKLSRPFQ 62
Query: 324 RSNKSKEFFAELKVLCKIHHINV--FISTFG-NGSLSDHLHDPLLKGHQPLTWTARTQIA 380
+K + EL ++ ++H N+ ++ F SL + ++ + Q+
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME 122
Query: 381 LDAAK----------GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERT 430
LD + GI+++H A +HRD+K SNI++ K+ DFGL RT
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLA----RT 175
Query: 431 NEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ T V T Y PE I ++ D+++ GV++ E+I G
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYK-------------ENVDIWSVGVIMGEMIKG 221
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 110/277 (39%), Gaps = 51/277 (18%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYFGLL--GDREAAIKKMRSNKSKEFFAELKVLCKIH 342
+E E + + ++G GGFG+VY G+ + AIK + ++ ++ EL ++
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVP 75
Query: 343 HINVFISTFGNG-----SLSDHLHDP-----LLKGHQPLT-----WTARTQIALDAAKG- 386
V + +G L D P +L+ +P+ T R + + A+
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 387 ----IEYIHDHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEKEMLATRLV 441
+E + +HRDIK NIL+D + K+ DFG L K+ + T
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL-----LKDTVYTDFD 190
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPT 501
GT Y PPE+I R+ V++ G++L +++ G D+
Sbjct: 191 GTRVYSPPEWIRYHRYH------------GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 235
Query: 502 KMKSLITIMAAVA-------EWCLNEDAVDRPEMRDI 531
++ + V+ WCL DRP +I
Sbjct: 236 IIRGQVFFRQRVSXECQHLIRWCLALRPXDRPTFEEI 272
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 95/232 (40%), Gaps = 39/232 (16%)
Query: 247 VSKAMSITTRAFSSQGQCKENTEDVTVLESERTIIFSLEEIEEATNNFDESRIIGRGGFG 306
++K S + G E+ E V + E + + + E E + +GRG FG
Sbjct: 32 LAKTWSSGSAKLQRLGPETEDNEGVLLTEKLKPVDY---EYREEVHWMTHQPRVGRGSFG 88
Query: 307 NVYFGLLGDRE----AAIKKMRSNKSKEFFAELKVLC----------------KIHHINV 346
V+ + D++ A+KK+R + F E V C + +N+
Sbjct: 89 EVHR--MKDKQTGFQCAVKKVRL---EVFRVEELVACAGLSSPRIVPLYGAVREGPWVNI 143
Query: 347 FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTS 406
F+ GSL L+K L A +G+EY+H R +H D+K
Sbjct: 144 FMELLEGGSLGQ-----LIKQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKAD 195
Query: 407 NILL-DDGLRAKVADFG-LVKLEERTNEKEMLATRLV-GTPGYLPPEYIFVK 455
N+LL DG RA + DFG + L+ K +L + GT ++ PE + K
Sbjct: 196 NVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 247
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 30/203 (14%)
Query: 300 IGRGGFGNVYFGLLGDREA-AIKKMRSNKSKE----FFAELKVLCKIHH---INVFISTF 351
+G G FG VY + A A K+ KS+E + E+++L H + + + +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 352 GNGSL--------SDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDI 403
+G L + +L+ + LT + + + ++H R +HRD+
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDL 135
Query: 404 KTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHS 463
K N+L+ ++ADFG+ +T +K +GTP ++ PE + M
Sbjct: 136 KAGNVLMTLEGDIRLADFGVSAKNLKTLQKR---DSFIGTPYWMAPEVV--------MCE 184
Query: 464 SVMELQVTTKTDVFAFGVVLAEL 486
++ + K D+++ G+ L E+
Sbjct: 185 TMKDTPYDYKADIWSLGITLIEM 207
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 97/233 (41%), Gaps = 66/233 (28%)
Query: 300 IGRGGFGNVY----FGLLGD---REAAIKKMRS----NKSKEFFAELKVLCKI-HHINVF 347
+GRG FG V FG+ R A+K ++ ++ + +ELK+L I HH+NV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 348 ------------------ISTFGNGSLSDHLH-------------DPLLKGHQPLTWTAR 376
FGN LS +L + L K LT
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGN--LSTYLRSKRNEFVPYKVAPEDLYKDF--LTLEHL 150
Query: 377 TQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEML 436
+ AKG+E++ + +HRD+ NILL + K+ DFGL + + + + +
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYV 205
Query: 437 ATRLVGTP-GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P ++ PE IF + + T ++DV++FGV+L E+ +
Sbjct: 206 RKGDARLPLKWMAPETIFDRVY-------------TIQSDVWSFGVLLWEIFS 245
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 94/223 (42%), Gaps = 36/223 (16%)
Query: 286 EIEEATNNFDESRI------IGRGGFGNVYFGLLGDREA-AIKKMRSNKSKE----FFAE 334
E E + D + + +G G FG VY + A A K+ KS+E + E
Sbjct: 7 EYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVE 66
Query: 335 LKVLCKIHH---INVFISTFGNGSL--------SDHLHDPLLKGHQPLTWTARTQIALDA 383
+++L H + + + + +G L + +L+ + LT +
Sbjct: 67 IEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQM 126
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGT 443
+ + ++H R +HRD+K N+L+ ++ADFG+ +T +K +GT
Sbjct: 127 LEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR---DSFIGT 180
Query: 444 PGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
P ++ PE + M ++ + K D+++ G+ L E+
Sbjct: 181 PYWMAPEVV--------MCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 95/232 (40%), Gaps = 39/232 (16%)
Query: 247 VSKAMSITTRAFSSQGQCKENTEDVTVLESERTIIFSLEEIEEATNNFDESRIIGRGGFG 306
++K S + G E+ E V + E + + + E E + +GRG FG
Sbjct: 16 LAKTWSSGSAKLQRLGPETEDNEGVLLTEKLKPVDY---EYREEVHWMTHQPRVGRGSFG 72
Query: 307 NVYFGLLGDRE----AAIKKMRSNKSKEFFAELKVLC----------------KIHHINV 346
V+ + D++ A+KK+R + F E V C + +N+
Sbjct: 73 EVHR--MKDKQTGFQCAVKKVRL---EVFRVEELVACAGLSSPRIVPLYGAVREGPWVNI 127
Query: 347 FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTS 406
F+ GSL L+K L A +G+EY+H R +H D+K
Sbjct: 128 FMELLEGGSLGQ-----LIKQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKAD 179
Query: 407 NILL-DDGLRAKVADFG-LVKLEERTNEKEMLATRLV-GTPGYLPPEYIFVK 455
N+LL DG RA + DFG + L+ K +L + GT ++ PE + K
Sbjct: 180 NVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 231
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 110/277 (39%), Gaps = 51/277 (18%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYFGLL--GDREAAIKKMRSNKSKEFFAELKVLCKIH 342
+E E + + ++G GGFG+VY G+ + AIK + ++ ++ EL ++
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVP 75
Query: 343 HINVFISTFGNG-----SLSDHLHDP-----LLKGHQPLT-----WTARTQIALDAAKG- 386
V + +G L D P +L+ +P+ T R + + A+
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 387 ----IEYIHDHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEKEMLATRLV 441
+E + +HRDIK NIL+D + K+ DFG L K+ + T
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL-----LKDTVYTDFD 190
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPT 501
GT Y PPE+I R+ V++ G++L +++ G D+
Sbjct: 191 GTRVYSPPEWIRYHRYH------------GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 235
Query: 502 KMKSLITIMAAVA-------EWCLNEDAVDRPEMRDI 531
++ + V+ WCL DRP +I
Sbjct: 236 IIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 272
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D KVADFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 36/207 (17%)
Query: 300 IGRGGFGNVYFGLL--GDREAAIKKMRS----NKSKEFFAELKVLCKIHHINVFISTFGN 353
IGRG FG V+ G L + A+K R + +F E ++L + H N+ + G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNI-VRLIGV 180
Query: 354 GSLSDHLH--DPLLKGHQPLTWT----ART------QIALDAAKGIEYIHDHTKARYVHR 401
+ ++ L++G LT+ AR Q+ DAA G+EY+ +HR
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHR 237
Query: 402 DIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDM 461
D+ N L+ + K++DFG+ + E R V + PE + R+
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPV-KWTAPEALNYGRY---- 292
Query: 462 HSSVMELQVTTKTDVFAFGVVLAELIT 488
++++DV++FG++L E +
Sbjct: 293 ---------SSESDVWSFGILLWETFS 310
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 41/214 (19%)
Query: 266 ENTEDVTVLESERTIIFSL-EEIEEATNNFDESRIIGRGGFGNVYFGLLGDRE----AAI 320
E+ E V + E + + + EE+ AT+ +GRG FG V+ + D++ A+
Sbjct: 70 EDNEGVLLTEKLKPVDYEYREEVHWATHQLR----LGRGSFGEVH--RMEDKQTGFQCAV 123
Query: 321 KKMRSNKSKEFFAELKVLC----------------KIHHINVFISTFGNGSLSDHLHDPL 364
KK+R + F AE + C + +N+F+ GSL L
Sbjct: 124 KKVRL---EVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ-----L 175
Query: 365 LKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILL-DDGLRAKVADFG- 422
+K L A +G+EY+H R +H D+K N+LL DG A + DFG
Sbjct: 176 VKEQGCLPEDRALYYLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGH 232
Query: 423 LVKLEERTNEKEMLATRLV-GTPGYLPPEYIFVK 455
V L+ K +L + GT ++ PE + +
Sbjct: 233 AVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGR 266
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 110/277 (39%), Gaps = 51/277 (18%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYFGLL--GDREAAIKKMRSNKSKEFFAELKVLCKIH 342
+E E + + ++G GGFG+VY G+ + AIK + ++ ++ EL ++
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVP 102
Query: 343 HINVFISTFGNG-----SLSDHLHDP-----LLKGHQPLT-----WTARTQIALDAAKG- 386
V + +G L D P +L+ +P+ T R + + A+
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 387 ----IEYIHDHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEKEMLATRLV 441
+E + +HRDIK NIL+D + K+ DFG L K+ + T
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL-----LKDTVYTDFD 217
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPT 501
GT Y PPE+I R+ V++ G++L +++ G D+
Sbjct: 218 GTRVYSPPEWIRYHRYH------------GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 262
Query: 502 KMKSLITIMAAVA-------EWCLNEDAVDRPEMRDI 531
++ + V+ WCL DRP +I
Sbjct: 263 IIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 299
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 91/226 (40%), Gaps = 54/226 (23%)
Query: 291 TNNFDESRIIGRGGFGNVYF--GLLGDREAAIKKMR------SNKSKEFFAELKVLCKIH 342
++ + + +G G +G V L E AIK ++ ++ S E+ VL ++
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 343 HINVF---------------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGI 387
H N+ + + G L D + +L+ Q + I G
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI---ILR--QKFSEVDAAVIMKQVLSGT 134
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLR---AKVADFGL-VKLEERTNEKEMLATRLVGT 443
Y+H H VHRD+K N+LL+ R K+ DFGL E KE L GT
Sbjct: 135 TYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL-----GT 186
Query: 444 PGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
Y+ PE V R ++D K DV++ GV+L L+ G
Sbjct: 187 AYYIAPE---VLRKKYD-----------EKCDVWSCGVILYILLCG 218
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D KVADFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D KVADFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 110/277 (39%), Gaps = 51/277 (18%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYFGLL--GDREAAIKKMRSNKSKEFFAELKVLCKIH 342
+E E + + ++G GGFG+VY G+ + AIK + ++ ++ EL ++
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVP 74
Query: 343 HINVFISTFGNG-----SLSDHLHDP-----LLKGHQPLT-----WTARTQIALDAAKG- 386
V + +G L D P +L+ +P+ T R + + A+
Sbjct: 75 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 387 ----IEYIHDHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEKEMLATRLV 441
+E + +HRDIK NIL+D + K+ DFG L K+ + T
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL-----LKDTVYTDFD 189
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPT 501
GT Y PPE+I R+ V++ G++L +++ G D+
Sbjct: 190 GTRVYSPPEWIRYHRYH------------GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 234
Query: 502 KMKSLITIMAAVA-------EWCLNEDAVDRPEMRDI 531
++ + V+ WCL DRP +I
Sbjct: 235 IIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 271
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D KVADFG K ++ RT L GTP
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT-------WXLCGTPE 204
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 205 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 109/274 (39%), Gaps = 45/274 (16%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYFGLL--GDREAAIKKMRSNKSKEFFAELKVLCKIH 342
+E E + + ++G GGFG+VY G+ + AIK + ++ ++ EL ++
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVP 88
Query: 343 HINVFISTFGNG-----SLSDHLHDP-----LLKGHQPLT-----WTARTQIALDAAKG- 386
V + +G L D P +L+ +P+ T R + + A+
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 387 ----IEYIHDHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEKEMLATRLV 441
+E + +HRDIK NIL+D + K+ DFG L K+ + T
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL-----LKDTVYTDFD 203
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDD---- 497
GT Y PPE+I R+ V++ G++L +++ G D+
Sbjct: 204 GTRVYSPPEWIRYHRYH------------GRSAAVWSLGILLYDMVCGDIPFEHDEEIIG 251
Query: 498 SEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDI 531
+ + + + WCL DRP +I
Sbjct: 252 GQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 21/109 (19%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFG-LVKLEERTNEKEMLATRLVGTP 444
I+ +H + YVHRDIK NIL+D ++ADFG +KL E + +A VGTP
Sbjct: 187 AIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA---VGTP 240
Query: 445 GYLPPEYIFVKRFRFDMHSSVME---LQVTTKTDVFAFGVVLAELITGK 490
Y+ PE + ME + + D ++ GV + E++ G+
Sbjct: 241 DYISPEIL-----------QAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 97/233 (41%), Gaps = 66/233 (28%)
Query: 300 IGRGGFGNVY----FGLLGD---REAAIKKMRS----NKSKEFFAELKVLCKI-HHINVF 347
+GRG FG V FG+ R A+K ++ ++ + +ELK+L I HH+NV
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 348 ------------------ISTFGNGSLSDHLH-------------DPLLKGHQPLTWTAR 376
FGN LS +L + L K LT
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGN--LSTYLRSKRNEFVPYKVAPEDLYKDF--LTLEHL 187
Query: 377 TQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEML 436
+ AKG+E++ + +HRD+ NILL + K+ DFGL + + + + +
Sbjct: 188 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYV 242
Query: 437 ATRLVGTP-GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P ++ PE IF + + T ++DV++FGV+L E+ +
Sbjct: 243 RKGDARLPLKWMAPETIFDRVY-------------TIQSDVWSFGVLLWEIFS 282
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 109/273 (39%), Gaps = 45/273 (16%)
Query: 286 EIEEATNNFDESRIIGRGGFGNVYFGLL--GDREAAIKKMRSNKSKEFFAELKVLCKIHH 343
E E + + ++G GGFG+VY G+ + AIK + ++ ++ EL ++
Sbjct: 1 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVPM 59
Query: 344 INVFISTFGNG-----SLSDHLHDP-----LLKGHQPLT-----WTARTQIALDAAKG-- 386
V + +G L D P +L+ +P+ T R + + A+
Sbjct: 60 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 119
Query: 387 ---IEYIHDHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEKEMLATRLVG 442
+E + +HRDIK NIL+D + K+ DFG L K+ + T G
Sbjct: 120 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL-----LKDTVYTDFDG 174
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDD----S 498
T Y PPE+I R+ V++ G++L +++ G D+
Sbjct: 175 TRVYSPPEWIRYHRYH------------GRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 222
Query: 499 EPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDI 531
+ + + + + WCL DRP +I
Sbjct: 223 QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 255
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 85/211 (40%), Gaps = 40/211 (18%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKM-----RSNKSKEFFAELKVLCKIHH------INV 346
IG G G V + + DR AIKK+ +K + EL ++ ++H +NV
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 347 F-----ISTFGNGSLSDHLHDPLLKG--HQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
F + F + L L D L L + + GI+++H A +
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHS---AGII 148
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SNI++ K+ DFGL RT + T V T Y PE I ++
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILGMGYK- 203
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
D+++ G ++ E++ K
Sbjct: 204 ------------ENVDIWSVGCIMGEMVRHK 222
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 109/274 (39%), Gaps = 45/274 (16%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYFGLL--GDREAAIKKMRSNKSKEFFAELKVLCKIH 342
+E E + + ++G GGFG+VY G+ + AIK + ++ ++ EL ++
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVP 88
Query: 343 HINVFISTFGNG-----SLSDHLHDP-----LLKGHQPLT-----WTARTQIALDAAKG- 386
V + +G L D P +L+ +P+ T R + + A+
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 387 ----IEYIHDHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEKEMLATRLV 441
+E + +HRDIK NIL+D + K+ DFG L K+ + T
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL-----LKDTVYTDFD 203
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDD---- 497
GT Y PPE+I R+ V++ G++L +++ G D+
Sbjct: 204 GTRVYSPPEWIRYHRYH------------GRSAAVWSLGILLYDMVCGDIPFEHDEEIIG 251
Query: 498 SEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDI 531
+ + + + WCL DRP +I
Sbjct: 252 GQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 110/277 (39%), Gaps = 51/277 (18%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYFGLL--GDREAAIKKMRSNKSKEFFAELKVLCKIH 342
+E E + + ++G GGFG+VY G+ + AIK + ++ ++ EL ++
Sbjct: 49 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVP 107
Query: 343 HINVFISTFGNG-----SLSDHLHDP-----LLKGHQPLT-----WTARTQIALDAAKG- 386
V + +G L D P +L+ +P+ T R + + A+
Sbjct: 108 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 167
Query: 387 ----IEYIHDHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEKEMLATRLV 441
+E + +HRDIK NIL+D + K+ DFG L K+ + T
Sbjct: 168 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL-----LKDTVYTDFD 222
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPT 501
GT Y PPE+I R+ V++ G++L +++ G D+
Sbjct: 223 GTRVYSPPEWIRYHRYH------------GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 267
Query: 502 KMKSLITIMAAVA-------EWCLNEDAVDRPEMRDI 531
++ + V+ WCL DRP +I
Sbjct: 268 IIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 304
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 98/230 (42%), Gaps = 59/230 (25%)
Query: 300 IGRGGFGNVYF----GLLGDR-----EAAIKKMRSNKSKEFFAEL-------KVLCKIHH 343
+G G FG V GL D+ + A+K ++S+ +++ ++L K++ K +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 344 I-------------NVFISTFGNGSLSDHLH-----------DPLLKGHQPLTWTARTQI 379
I V + G+L ++L +P + L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 380 ALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLAT 438
A A+G+EY+ + +HRD+ N+L+ + K+ADFGL + + K+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 439 RLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
RL ++ PE +F + + T ++DV++FGV+L E+ T
Sbjct: 213 RL--PVKWMAPEALFDRIY-------------THQSDVWSFGVLLWEIFT 247
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 109/274 (39%), Gaps = 45/274 (16%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYFGLL--GDREAAIKKMRSNKSKEFFAELKVLCKIH 342
+E E + + ++G GGFG+VY G+ + AIK + ++ ++ EL ++
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVP 87
Query: 343 HINVFISTFGNG-----SLSDHLHDP-----LLKGHQPLT-----WTARTQIALDAAKG- 386
V + +G L D P +L+ +P+ T R + + A+
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 387 ----IEYIHDHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEKEMLATRLV 441
+E + +HRDIK NIL+D + K+ DFG L K+ + T
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL-----LKDTVYTDFD 202
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDD---- 497
GT Y PPE+I R+ V++ G++L +++ G D+
Sbjct: 203 GTRVYSPPEWIRYHRYH------------GRSAAVWSLGILLYDMVCGDIPFEHDEEIIG 250
Query: 498 SEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDI 531
+ + + + WCL DRP +I
Sbjct: 251 GQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 284
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 84/223 (37%), Gaps = 53/223 (23%)
Query: 292 NNFDESRIIGRGGFGNVYFGLLGDRE--AAIKKM-RSNKSKE-----FFAELKVLCKIHH 343
++FD R +G+G FGNVY + A+K + +S KE E+++ + H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 344 INVFISTFGNGSLSDHLHD-----------------PLLKGHQPLTWTARTQIALDAAKG 386
N+ + ++ HD L+ H + A
Sbjct: 74 PNIL-------RMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADA 126
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+ Y H+ + +HRDIK N+L+ K+ADFG + + + GT Y
Sbjct: 127 LHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWS-----VHAPSLRRRXMCGTLDY 178
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
LPPE I K K D++ GV+ E + G
Sbjct: 179 LPPEMIEGKTH-------------DEKVDLWCAGVLCYEFLVG 208
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 95/232 (40%), Gaps = 39/232 (16%)
Query: 247 VSKAMSITTRAFSSQGQCKENTEDVTVLESERTIIFSLEEIEEATNNFDESRIIGRGGFG 306
++K S + G E+ E V + E + + + E E + +GRG FG
Sbjct: 30 LAKTWSSGSAKLQRLGPETEDNEGVLLTEKLKPVDY---EYREEVHWMTHQPRLGRGSFG 86
Query: 307 NVYFGLLGDRE----AAIKKMRSNKSKEFFAELKVLC----------------KIHHINV 346
V+ + D++ A+KK+R + F E V C + +N+
Sbjct: 87 EVH--RMKDKQTGFQCAVKKVRL---EVFRVEELVACAGLSSPRIVPLYGAVREGPWVNI 141
Query: 347 FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTS 406
F+ GSL L+K L A +G+EY+H R +H D+K
Sbjct: 142 FMELLEGGSLGQ-----LIKQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKAD 193
Query: 407 NILL-DDGLRAKVADFG-LVKLEERTNEKEMLATRLV-GTPGYLPPEYIFVK 455
N+LL DG RA + DFG + L+ K +L + GT ++ PE + K
Sbjct: 194 NVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 245
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 11/95 (11%)
Query: 395 KARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFV 454
K VHRD+K NILLDD + K+ DFG + + E L + + GTP YL PE I
Sbjct: 142 KLNIVHRDLKPENILLDDDMNIKLTDFG---FSCQLDPGEKLRS-VCGTPSYLAPEIIEC 197
Query: 455 KRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
D H + D+++ GV++ L+ G
Sbjct: 198 S--MNDNHPG-----YGKEVDMWSTGVIMYTLLAG 225
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 123/311 (39%), Gaps = 84/311 (27%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVY----FGLLGDREA----AIKKMRS----NKSKEFF 332
E+ E NN + +G G FG V FGL G +A A+K ++S ++ +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGL-GKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 333 AELKVLCKIHHINVFISTFGN----------------GSLSDHLH--------DPLLKGH 368
+ELK++ + ++ G G L + L DP
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIA 157
Query: 369 QPLTWTARTQIAL----DAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLV 424
TA T+ L A+G+ ++ +HRD+ N+LL +G AK+ DFGL
Sbjct: 158 NS---TASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 211
Query: 425 KLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVL 483
+ + N+ + P ++ PE IF + T ++DV+++G++L
Sbjct: 212 R--DIMNDSNYIVKGNARLPVKWMAPESIF-------------DCVYTVQSDVWSYGILL 256
Query: 484 AE------------LITGK-RALIRDDSEPTK----MKSLITIMAAVAEWCLNEDAVDRP 526
E L+ K L++D + + K++ +IM A C + RP
Sbjct: 257 WEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQA----CWALEPTHRP 312
Query: 527 EMRDIVAILSQ 537
+ I + L +
Sbjct: 313 TFQQICSFLQE 323
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 99/230 (43%), Gaps = 59/230 (25%)
Query: 300 IGRGGFGNVYF----GLLGDR-----EAAIKKMRSNKSKEFFAEL-------KVLCKIHH 343
+G G FG V GL D+ + A+K ++S+ +++ ++L K++ K +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 344 I-------------NVFISTFGNGSLSDHL-----------HDPLLKGHQPLTWTARTQI 379
I V + G+L ++L ++P + L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 380 ALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLAT 438
A A+G+EY+ + +HRD+ N+L+ + K+ADFGL + + K+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 439 RLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
RL ++ PE +F + + T ++DV++FGV+L E+ T
Sbjct: 213 RL--PVKWMAPEALFDRIY-------------THQSDVWSFGVLLWEIFT 247
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 107/264 (40%), Gaps = 40/264 (15%)
Query: 244 AKHVSKAMSITTRAFSSQGQCKENTEDVTVLESERTIIFSLEEIEEATNNFDESRIIGRG 303
K + + I AF D L+S+ I + E ++ + +GRG
Sbjct: 6 GKKRNPGLKIPKEAFEQPQTSSTPPRD---LDSKACISIGNQNFEVKADDLEPIMELGRG 62
Query: 304 GFGNV--YFGLLGDREAAIKKMR----SNKSKEFFAELKVLCKIHHINVFISTFG----- 352
+G V + + A+K++R S + K +L + + ++ +G
Sbjct: 63 AYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFRE 122
Query: 353 ----------NGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRD 402
+ SL D + ++ Q + +IA+ K +E H H+K +HRD
Sbjct: 123 GDVWICMELMDTSL-DKFYKQVIDKGQTIPEDILGKIAVSIVKALE--HLHSKLSVIHRD 179
Query: 403 IKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMH 462
+K SN+L++ + K+ DFG+ + K + A G Y+ PE I +
Sbjct: 180 VKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA----GCKPYMAPERI---------N 226
Query: 463 SSVMELQVTTKTDVFAFGVVLAEL 486
+ + + K+D+++ G+ + EL
Sbjct: 227 PELNQKGYSVKSDIWSLGITMIEL 250
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 40/211 (18%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKM-----RSNKSKEFFAELKVLCKIHHINV--FIST 350
IG G G V + + DR AIKK+ +K + EL ++ ++H N+ ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 351 FGNGSLSDHLHDP-LLKGHQPLTWTARTQIALDAAK----------GIEYIHDHTKARYV 399
F + D L+ Q+ LD + GI+++H A +
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHS---AGII 148
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SNI++ K+ DFGL RT + T V T Y PE I ++
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILGMGYK- 203
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
D+++ G ++ E++ K
Sbjct: 204 ------------ENVDIWSVGCIMGEMVRHK 222
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 122/317 (38%), Gaps = 87/317 (27%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVY----FGLLGDREA----AIKKMRS----NKSKEFF 332
E+ E NN + +G G FG V FGL G +A A+K ++S ++ +
Sbjct: 24 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGL-GKEDAVLKVAVKMLKSTAHADEKEALM 82
Query: 333 AELKVLCKIHHINVFISTFGN----------------GSLSDHLH-------DPLLKGHQ 369
+ELK++ + ++ G G L + L P L Q
Sbjct: 83 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQ 142
Query: 370 -----------PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKV 418
PL + A+G+ ++ +HRD+ N+LL +G AK+
Sbjct: 143 DPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKI 199
Query: 419 ADFGLVKLEERTNEKEMLATRLVGTP-GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVF 477
DFGL + + N+ + P ++ PE IF + T ++DV+
Sbjct: 200 GDFGLAR--DIMNDSNYIVKGNARLPVKWMAPESIF-------------DCVYTVQSDVW 244
Query: 478 AFGVVLAE------------LITGK-RALIRDDSEPTK----MKSLITIMAAVAEWCLNE 520
++G++L E L+ K L++D + + K++ +IM A C
Sbjct: 245 SYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQA----CWAL 300
Query: 521 DAVDRPEMRDIVAILSQ 537
+ RP + I + L +
Sbjct: 301 EPTHRPTFQQICSFLQE 317
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 99/230 (43%), Gaps = 59/230 (25%)
Query: 300 IGRGGFGNVYF----GLLGDR-----EAAIKKMRSNKSKEFFAEL-------KVLCKIHH 343
+G G FG V GL D+ + A+K ++S+ +++ ++L K++ K +
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 344 I-------------NVFISTFGNGSLSDHL-----------HDPLLKGHQPLTWTARTQI 379
I V + G+L ++L ++P + L+
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 380 ALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLAT 438
A A+G+EY+ + +HRD+ N+L+ + K+ADFGL + + K+
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 439 RLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
RL ++ PE +F + + T ++DV++FGV+L E+ T
Sbjct: 206 RL--PVKWMAPEALFDRIY-------------THQSDVWSFGVLLWEIFT 240
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 16/91 (17%)
Query: 393 HTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
H + HRD+K SNIL+D R K++DFG E +K++ +R GT ++PPE+
Sbjct: 168 HNEKNICHRDVKPSNILMDKNGRVKLSDFG---ESEYMVDKKIKGSR--GTYEFMPPEF- 221
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVL 483
F SS K D+++ G+ L
Sbjct: 222 ------FSNESSYN----GAKVDIWSLGICL 242
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 87/216 (40%), Gaps = 40/216 (18%)
Query: 294 FDESRIIGRGGFGNV--YFGLLGDREAAIKKM-----RSNKSKEFFAELKVLCKIHH--- 343
+ + + IG G G V F + A+KK+ +K + EL +L ++H
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 83
Query: 344 ---INVF-----ISTFGNGSLSDHLHDPLLKG--HQPLTWTARTQIALDAAKGIEYIHDH 393
+NVF + F + L L D L H L + + GI+++H
Sbjct: 84 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLH-- 141
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
A +HRD+K SNI++ K+ DFGL RT + T V T Y PE I
Sbjct: 142 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLA----RTASTNFMMTPYVVTRYYRAPEVIL 196
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
++ D+++ G ++ EL+ G
Sbjct: 197 GMGYK-------------ENVDIWSVGCIMGELVKG 219
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 99/230 (43%), Gaps = 59/230 (25%)
Query: 300 IGRGGFGNVYF----GLLGDR-----EAAIKKMRSNKSKEFFAEL-------KVLCKIHH 343
+G G FG V GL D+ + A+K ++S+ +++ ++L K++ K +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 344 I-------------NVFISTFGNGSLSDHL-----------HDPLLKGHQPLTWTARTQI 379
I V + G+L ++L ++P + L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 380 ALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLAT 438
A A+G+EY+ + +HRD+ N+L+ + K+ADFGL + + K+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 439 RLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
RL ++ PE +F + + T ++DV++FGV+L E+ T
Sbjct: 213 RL--PVKWMAPEALFDRIY-------------THQSDVWSFGVLLWEIFT 247
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 40/211 (18%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKM-----RSNKSKEFFAELKVLCKIHHINV--FIST 350
IG G G V + + DR AIKK+ +K + EL ++ ++H N+ ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 351 FGNGSLSDHLHDP-LLKGHQPLTWTARTQIALDAAK----------GIEYIHDHTKARYV 399
F + D L+ Q+ LD + GI+++H A +
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGII 148
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SNI++ K+ DFGL RT + T V T Y PE I ++
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILGMGYK- 203
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
D+++ G ++ E++ K
Sbjct: 204 ------------ENVDIWSVGCIMGEMVRHK 222
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 99/230 (43%), Gaps = 59/230 (25%)
Query: 300 IGRGGFGNVYF----GLLGDR-----EAAIKKMRSNKSKEFFAEL-------KVLCKIHH 343
+G G FG V GL D+ + A+K ++S+ +++ ++L K++ K +
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 344 I-------------NVFISTFGNGSLSDHL-----------HDPLLKGHQPLTWTARTQI 379
I V + G+L ++L ++P + L+
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 380 ALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLAT 438
A A+G+EY+ + +HRD+ N+L+ + K+ADFGL + + K+
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 439 RLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
RL ++ PE +F + + T ++DV++FGV+L E+ T
Sbjct: 198 RL--PVKWMAPEALFDRIY-------------THQSDVWSFGVLLWEIFT 232
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 83/226 (36%), Gaps = 59/226 (26%)
Query: 292 NNFDESRIIGRGGFGNVYFGLLGDREAAIKKMRSNKSKEFFAELKVLCK--IHHINVFIS 349
++F+ R +G+G FGNVY K F LKVL K I V
Sbjct: 23 DDFEIGRPLGKGKFGNVYLA-------------REKKSHFIVALKVLFKSQIEKEGVEHQ 69
Query: 350 TFGNGSLSDHLHDP-LLKGHQPLTWTARTQIALDAAKGIEYIHDHTKA------------ 396
+ HLH P +L+ + R + L+ A E + K+
Sbjct: 70 LRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIM 129
Query: 397 -------------RYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGT 443
+ +HRDIK N+LL K+ADFG K M GT
Sbjct: 130 EELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTM-----CGT 184
Query: 444 PGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
YLPPE I + MH+ K D++ GV+ EL+ G
Sbjct: 185 LDYLPPEMIEGR-----MHNE--------KVDLWCIGVLCYELLVG 217
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 99/230 (43%), Gaps = 59/230 (25%)
Query: 300 IGRGGFGNVYF----GLLGDR-----EAAIKKMRSNKSKEFFAEL-------KVLCKIHH 343
+G G FG V GL D+ + A+K ++S+ +++ ++L K++ K +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 344 I-------------NVFISTFGNGSLSDHL-----------HDPLLKGHQPLTWTARTQI 379
I V + G+L ++L ++P + L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 380 ALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLAT 438
A A+G+EY+ + +HRD+ N+L+ + K+ADFGL + + K+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 439 RLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
RL ++ PE +F + + T ++DV++FGV+L E+ T
Sbjct: 213 RL--PVKWMAPEALFDRIY-------------THQSDVWSFGVLLWEIFT 247
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 87/217 (40%), Gaps = 40/217 (18%)
Query: 294 FDESRIIGRGGFGNV--YFGLLGDREAAIKKM-----RSNKSKEFFAELKVLCKIHHINV 346
+ + IG G G V + + DR AIKK+ +K + EL ++ ++H N+
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 347 --FISTFGNGSLSDHLHDP-LLKGHQPLTWTARTQIALDAAK----------GIEYIHDH 393
++ F + D L+ Q+ LD + GI+++H
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 181
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
A +HRD+K SNI++ K+ DFGL RT + T V T Y PE I
Sbjct: 182 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVIL 236
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
++ D+++ G ++ E++ K
Sbjct: 237 GMGYK-------------ENVDIWSVGCIMGEMVRHK 260
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 99/224 (44%), Gaps = 51/224 (22%)
Query: 292 NNFDESRIIGRGGFGNVY-------------FGLLGDREAAIK---KMRSNKSKEFFAEL 335
+ F+ +++G+G FG V+ + + ++A +K ++R+ ++ E+
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 336 K--VLCKIHH-------INVFISTFGNGSLSDHLHDPLLKGHQPLT-WTARTQIALDAAK 385
+ K+H+ + + + G L L ++ + + + A +ALD
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD--- 140
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
H H+ ++RD+K NILLD+ K+ DFGL K E +EK+ A GT
Sbjct: 141 -----HLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKK--AYSFCGTVE 191
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
Y+ PE + + T D ++FGV++ E++TG
Sbjct: 192 YMAPEVVNRRGH-------------TQSADWWSFGVLMFEMLTG 222
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 99/224 (44%), Gaps = 51/224 (22%)
Query: 292 NNFDESRIIGRGGFGNVY-------------FGLLGDREAAIK---KMRSNKSKEFFAEL 335
+ F+ +++G+G FG V+ + + ++A +K ++R+ ++ E+
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 336 K--VLCKIHH-------INVFISTFGNGSLSDHLHDPLLKGHQPLT-WTARTQIALDAAK 385
+ K+H+ + + + G L L ++ + + + A +ALD
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD--- 141
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
H H+ ++RD+K NILLD+ K+ DFGL K E +EK+ A GT
Sbjct: 142 -----HLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKK--AYSFCGTVE 192
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
Y+ PE + + T D ++FGV++ E++TG
Sbjct: 193 YMAPEVVNRRGH-------------TQSADWWSFGVLMFEMLTG 223
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 99/230 (43%), Gaps = 59/230 (25%)
Query: 300 IGRGGFGNVYF----GLLGDR-----EAAIKKMRSNKSKEFFAEL-------KVLCKIHH 343
+G G FG V GL D+ + A+K ++S+ +++ ++L K++ K +
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 344 I-------------NVFISTFGNGSLSDHL-----------HDPLLKGHQPLTWTARTQI 379
I V + G+L ++L ++P + L+
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 380 ALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLAT 438
A A+G+EY+ + +HRD+ N+L+ + K+ADFGL + + K+
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 439 RLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
RL ++ PE +F + + T ++DV++FGV+L E+ T
Sbjct: 202 RL--PVKWMAPEALFDRIY-------------THQSDVWSFGVLLWEIFT 236
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 99/230 (43%), Gaps = 59/230 (25%)
Query: 300 IGRGGFGNVYF----GLLGDR-----EAAIKKMRSNKSKEFFAEL-------KVLCKIHH 343
+G G FG V GL D+ + A+K ++S+ +++ ++L K++ K +
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 344 I-------------NVFISTFGNGSLSDHL-----------HDPLLKGHQPLTWTARTQI 379
I V + G+L ++L ++P + L+
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 380 ALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLAT 438
A A+G+EY+ + +HRD+ N+L+ + K+ADFGL + + K+
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 439 RLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
RL ++ PE +F + + T ++DV++FGV+L E+ T
Sbjct: 205 RL--PVKWMAPEALFDRIY-------------THQSDVWSFGVLLWEIFT 239
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 47/233 (20%)
Query: 300 IGRGGFGNVYFGLL--GDREAAIKKM--RSNKSKEF-FAELKVLCKIHHINVFISTFGNG 354
IG G G V + + A+KKM R + +E F E+ ++ H NV + + +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV-VEMYNSY 86
Query: 355 SLSDHLHDPL--LKG--------HQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIK 404
+ D L + L+G H + + L + + +H +HRDIK
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIK 143
Query: 405 TSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSS 464
+ +ILL R K++DFG + +++ LVGTP ++ PE I
Sbjct: 144 SDSILLTHDGRVKLSDFGFCA---QVSKEVPRRKXLVGTPYWMAPELI------------ 188
Query: 465 VMELQVTTKTDVFAFGVVLAELITGK-----------RALIRDDSEPTKMKSL 506
L + D+++ G+++ E++ G+ +IRD+ P ++K+L
Sbjct: 189 -SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-PPRLKNL 239
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 105/260 (40%), Gaps = 45/260 (17%)
Query: 299 IIGRGGFGNVYFGLL--GDREAAIKKMRSNKSKEFFAELKVLCKIHHINVFISTFGNG-- 354
++G GGFG+VY G+ + AIK + ++ ++ EL ++ V + +G
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVPMEVVLLKKVSSGFS 69
Query: 355 ---SLSDHLHDP-----LLKGHQPLT-----WTARTQIALDAAKG-----IEYIHDHTKA 396
L D P +L+ +P+ T R + + A+ +E +
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 129
Query: 397 RYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVK 455
+HRDIK NIL+D + K+ DFG L K+ + T GT Y PPE+I
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGAL-----LKDTVYTDFDGTRVYSPPEWIRYH 184
Query: 456 RFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDD----SEPTKMKSLITIMA 511
R+ V++ G++L +++ G D+ + + + +
Sbjct: 185 RYH------------GRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQ 232
Query: 512 AVAEWCLNEDAVDRPEMRDI 531
+ WCL DRP +I
Sbjct: 233 HLIRWCLALRPSDRPTFEEI 252
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 47/233 (20%)
Query: 300 IGRGGFGNVYFGLL--GDREAAIKKM--RSNKSKEF-FAELKVLCKIHHINVFISTFGNG 354
IG G G V + + A+KKM R + +E F E+ ++ H NV + + +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV-VEMYNSY 95
Query: 355 SLSDHLHDPL--LKG--------HQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIK 404
+ D L + L+G H + + L + + +H +HRDIK
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIK 152
Query: 405 TSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSS 464
+ +ILL R K++DFG + +++ LVGTP ++ PE I
Sbjct: 153 SDSILLTHDGRVKLSDFGFCA---QVSKEVPRRKXLVGTPYWMAPELI------------ 197
Query: 465 VMELQVTTKTDVFAFGVVLAELITGK-----------RALIRDDSEPTKMKSL 506
L + D+++ G+++ E++ G+ +IRD+ P ++K+L
Sbjct: 198 -SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-PPRLKNL 248
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 21/131 (16%)
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
+G++++H + VHRD+K NIL+ G K+ADFGL R +M T +V T
Sbjct: 131 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA----RIYSYQMALTPVVVTL 183
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMK 504
Y PE + + T D+++ G + AE+ ++ L +SE ++
Sbjct: 184 WYRAPEVLLQSTY-------------ATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLG 229
Query: 505 SLITIMAAVAE 515
+ ++ E
Sbjct: 230 KIFDLIGLPPE 240
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 91/226 (40%), Gaps = 54/226 (23%)
Query: 291 TNNFDESRIIGRGGFGNVYF--GLLGDREAAIKKMR------SNKSKEFFAELKVLCKIH 342
++ + + +G G +G V L E AIK ++ ++ S E+ VL ++
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 343 HINVF---------------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGI 387
H N+ + + G L D + +L+ Q + I G
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI---ILR--QKFSEVDAAVIMKQVLSGT 117
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRA---KVADFGL-VKLEERTNEKEMLATRLVGT 443
Y+H H VHRD+K N+LL+ R K+ DFGL E KE L GT
Sbjct: 118 TYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL-----GT 169
Query: 444 PGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
Y+ PE V R ++D K DV++ GV+L L+ G
Sbjct: 170 AYYIAPE---VLRKKYD-----------EKCDVWSCGVILYILLCG 201
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 105/260 (40%), Gaps = 45/260 (17%)
Query: 299 IIGRGGFGNVYFGLL--GDREAAIKKMRSNKSKEFFAELKVLCKIHHINVFISTFGNG-- 354
++G GGFG+VY G+ + AIK + ++ ++ EL ++ V + +G
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVPMEVVLLKKVSSGFS 69
Query: 355 ---SLSDHLHDP-----LLKGHQPLT-----WTARTQIALDAAKG-----IEYIHDHTKA 396
L D P +L+ +P+ T R + + A+ +E +
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 129
Query: 397 RYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVK 455
+HRDIK NIL+D + K+ DFG L K+ + T GT Y PPE+I
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGAL-----LKDTVYTDFDGTRVYSPPEWIRYH 184
Query: 456 RFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDD----SEPTKMKSLITIMA 511
R+ V++ G++L +++ G D+ + + + +
Sbjct: 185 RYH------------GRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ 232
Query: 512 AVAEWCLNEDAVDRPEMRDI 531
+ WCL DRP +I
Sbjct: 233 HLIRWCLALRPSDRPTFEEI 252
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 100/233 (42%), Gaps = 59/233 (25%)
Query: 297 SRIIGRGGFGNVYF----GLLGDR-----EAAIKKMRSNKSKEFFAEL-------KVLCK 340
+ +G G FG V GL D+ + A+K ++S+ +++ ++L K++ K
Sbjct: 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 341 IHHI-------------NVFISTFGNGSLSDHL-----------HDPLLKGHQPLTWTAR 376
+I V + G+L ++L ++P + L+
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 377 TQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEM 435
A A+G+EY+ + +HRD+ N+L+ + K+ADFGL + + K+
Sbjct: 194 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 436 LATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
RL ++ PE +F + + T ++DV++FGV+L E+ T
Sbjct: 251 TNGRL--PVKWMAPEALFDRIY-------------THQSDVWSFGVLLWEIFT 288
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 47/233 (20%)
Query: 300 IGRGGFGNVYFGLL--GDREAAIKKM--RSNKSKEF-FAELKVLCKIHHINVFISTFGNG 354
IG G G V + + A+KKM R + +E F E+ ++ H NV + + +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV-VEMYNSY 97
Query: 355 SLSDHLHDPL--LKG--------HQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIK 404
+ D L + L+G H + + L + + +H +HRDIK
Sbjct: 98 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIK 154
Query: 405 TSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSS 464
+ +ILL R K++DFG + +++ LVGTP ++ PE I
Sbjct: 155 SDSILLTHDGRVKLSDFGFCA---QVSKEVPRRKXLVGTPYWMAPELI------------ 199
Query: 465 VMELQVTTKTDVFAFGVVLAELITGK-----------RALIRDDSEPTKMKSL 506
L + D+++ G+++ E++ G+ +IRD+ P ++K+L
Sbjct: 200 -SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-PPRLKNL 250
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 19/94 (20%)
Query: 399 VHRDIKTSNILLDD---GLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVK 455
VHRD+K N+LL G K+ADFGL +E + +++ GTPGYL PE + +
Sbjct: 125 VHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFG--FAGTPGYLSPEVLRKE 181
Query: 456 RFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ D++A GV+L L+ G
Sbjct: 182 AY-------------GKPVDIWACGVILYILLVG 202
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 87/217 (40%), Gaps = 40/217 (18%)
Query: 294 FDESRIIGRGGFGNV--YFGLLGDREAAIKKM-----RSNKSKEFFAELKVLCKIHHINV 346
+ + IG G G V + + DR AIKK+ +K + EL ++ ++H N+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 347 --FISTFGNGSLSDHLHDP-LLKGHQPLTWTARTQIALDAAK----------GIEYIHDH 393
++ F + D L+ Q+ LD + GI+++H
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS- 145
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
A +HRD+K SNI++ K+ DFGL RT + T V T Y PE I
Sbjct: 146 --AGIIHRDLKPSNIVVKSDCTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVIL 199
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
++ D+++ G ++ E++ K
Sbjct: 200 GMGYK-------------ENVDIWSVGCIMGEMVRHK 223
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 87/217 (40%), Gaps = 40/217 (18%)
Query: 294 FDESRIIGRGGFGNV--YFGLLGDREAAIKKM-----RSNKSKEFFAELKVLCKIHHINV 346
+ + IG G G V + + DR AIKK+ +K + EL ++ ++H N+
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 347 --FISTFGNGSLSDHLHDP-LLKGHQPLTWTARTQIALDAAK----------GIEYIHDH 393
++ F + D L+ Q+ LD + GI+++H
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS- 182
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
A +HRD+K SNI++ K+ DFGL RT + T V T Y PE I
Sbjct: 183 --AGIIHRDLKPSNIVVKSDCTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVIL 236
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
++ D+++ G ++ E++ K
Sbjct: 237 GMGYK-------------ENVDIWSVGCIMGEMVRHK 260
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 99/224 (44%), Gaps = 51/224 (22%)
Query: 292 NNFDESRIIGRGGFGNVY-------------FGLLGDREAAIK---KMRSNKSKEFFAEL 335
+ F+ +++G+G FG V+ + + ++A +K ++R+ ++ E+
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 336 K--VLCKIHH-------INVFISTFGNGSLSDHLHDPLLKGHQPLT-WTARTQIALDAAK 385
+ K+H+ + + + G L L ++ + + + A +ALD
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD--- 140
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
H H+ ++RD+K NILLD+ K+ DFGL K E +EK+ A GT
Sbjct: 141 -----HLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKK--AYSFCGTVE 191
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
Y+ PE + + T D ++FGV++ E++TG
Sbjct: 192 YMAPEVVNRRGH-------------TQSADWWSFGVLMFEMLTG 222
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 57/138 (41%), Gaps = 28/138 (20%)
Query: 354 GSLSDHLHDPLLKGHQPLTWTARTQIALDAAK---GIEYIHDHTKARYVHRDIKTSNILL 410
GSL D+L P Q+ L A + G+ Y+H Y+HR + N+LL
Sbjct: 97 GSLRDYL---------PRHCVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLL 144
Query: 411 DDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQV 470
D+ K+ DFGL K +E + + PE + E +
Sbjct: 145 DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE-------------CLKECKF 191
Query: 471 TTKTDVFAFGVVLAELIT 488
+DV++FGV L EL+T
Sbjct: 192 YYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 57/138 (41%), Gaps = 28/138 (20%)
Query: 354 GSLSDHLHDPLLKGHQPLTWTARTQIALDAAK---GIEYIHDHTKARYVHRDIKTSNILL 410
GSL D+L P Q+ L A + G+ Y+H Y+HR + N+LL
Sbjct: 98 GSLRDYL---------PRHCVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLL 145
Query: 411 DDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQV 470
D+ K+ DFGL K +E + + PE + E +
Sbjct: 146 DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE-------------CLKECKF 192
Query: 471 TTKTDVFAFGVVLAELIT 488
+DV++FGV L EL+T
Sbjct: 193 YYASDVWSFGVTLYELLT 210
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 44/238 (18%)
Query: 276 SERTIIFSLEEIEEAT----NNFDESRIIGRGGFGNV--YFGLLGDREAAIKKM-----R 324
S+R F EI ++T + + IG G G V + + +R AIKK+
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 63
Query: 325 SNKSKEFFAELKVLCKIHHINV--FISTFG-NGSLSDHLHDPLLKGHQPLTWTARTQIAL 381
+K + EL ++ ++H N+ ++ F SL + ++ + Q+ L
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMEL 123
Query: 382 DAAK----------GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTN 431
D + GI+++H A +HRD+K SNI++ K+ DFGL RT
Sbjct: 124 DHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLA----RTA 176
Query: 432 EKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ T V T Y PE I ++ D+++ G ++ E+I G
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYK-------------ENVDIWSVGCIMGEMIKG 221
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 40/211 (18%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKM-----RSNKSKEFFAELKVLCKIHHINV--FIST 350
IG G G V + + DR AIKK+ +K + EL ++ ++H N+ ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 351 FGNGSLSDHLHDP-LLKGHQPLTWTARTQIALDAAK----------GIEYIHDHTKARYV 399
F + D L+ Q+ LD + GI+++H A +
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGII 148
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SNI++ K+ DFGL RT + T V T Y PE I ++
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILGMGYK- 203
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
D+++ G ++ E++ K
Sbjct: 204 ------------ENVDIWSVGCIMGEMVRHK 222
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+++D KV DFGL K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 19/94 (20%)
Query: 399 VHRDIKTSNILL---DDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVK 455
VHRD+K N+LL G K+ADFGL +E + +++ GTPGYL PE +
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFG--FAGTPGYLSPEVL--- 178
Query: 456 RFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
R D + + D++A GV+L L+ G
Sbjct: 179 --RKDPYGKPV--------DMWACGVILYILLVG 202
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 40/211 (18%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKM-----RSNKSKEFFAELKVLCKIHHINV--FIST 350
IG G G V + + DR AIKK+ +K + EL ++ ++H N+ ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 351 FGNGSLSDHLHDP-LLKGHQPLTWTARTQIALDAAK----------GIEYIHDHTKARYV 399
F + D L+ Q+ LD + GI+++H A +
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGII 148
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SNI++ K+ DFGL RT + T V T Y PE I ++
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILGMGYK- 203
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
D+++ G ++ E++ K
Sbjct: 204 ------------ENVDIWSVGCIMGEMVRHK 222
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 47/233 (20%)
Query: 300 IGRGGFGNVYFGLL--GDREAAIKKM--RSNKSKEF-FAELKVLCKIHHINVFISTFGNG 354
IG G G V + + A+KKM R + +E F E+ ++ H NV + + +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV-VEMYNSY 90
Query: 355 SLSDHLHDPL--LKG--------HQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIK 404
+ D L + L+G H + + L + + +H +HRDIK
Sbjct: 91 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIK 147
Query: 405 TSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSS 464
+ +ILL R K++DFG + +++ LVGTP ++ PE I
Sbjct: 148 SDSILLTHDGRVKLSDFGFCA---QVSKEVPRRKXLVGTPYWMAPELI------------ 192
Query: 465 VMELQVTTKTDVFAFGVVLAELITGK-----------RALIRDDSEPTKMKSL 506
L + D+++ G+++ E++ G+ +IRD+ P ++K+L
Sbjct: 193 -SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-PPRLKNL 243
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 85/211 (40%), Gaps = 40/211 (18%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKM-----RSNKSKEFFAELKVLCKIHH------INV 346
IG G G V + + DR AIKK+ +K + EL ++ ++H +NV
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 347 F-----ISTFGNGSLSDHLHDPLLKG--HQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
F + F + L L D L L + + GI+++H A +
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHS---AGII 148
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SNI++ K+ DFGL RT + T V T Y PE I ++
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILGMGYK- 203
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
D+++ G ++ E++ K
Sbjct: 204 ------------ENVDIWSVGCIMGEMVRHK 222
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 85/211 (40%), Gaps = 40/211 (18%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKM-----RSNKSKEFFAELKVLCKIHH------INV 346
IG G G V + + DR AIKK+ +K + EL ++ ++H +NV
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 347 F-----ISTFGNGSLSDHLHDPLLKG--HQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
F + F + L L D L L + + GI+++H A +
Sbjct: 85 FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHS---AGII 141
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SNI++ K+ DFGL RT + T V T Y PE I ++
Sbjct: 142 HRDLKPSNIVVKSDXTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILGMGYK- 196
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
D+++ G ++ E++ K
Sbjct: 197 ------------ENVDIWSVGCIMGEMVRHK 215
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 87/217 (40%), Gaps = 40/217 (18%)
Query: 294 FDESRIIGRGGFGNV--YFGLLGDREAAIKKM-----RSNKSKEFFAELKVLCKIHHINV 346
+ + IG G G V + + DR AIKK+ +K + EL ++ ++H N+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 347 --FISTFGNGSLSDHLHDP-LLKGHQPLTWTARTQIALDAAK----------GIEYIHDH 393
++ F + D L+ Q+ LD + GI+++H
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS- 145
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
A +HRD+K SNI++ K+ DFGL RT + T V T Y PE I
Sbjct: 146 --AGIIHRDLKPSNIVVKSDCTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVIL 199
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
++ D+++ G ++ E++ K
Sbjct: 200 GMGYK-------------ENVDIWSVGCIMGEMVRHK 223
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 87/216 (40%), Gaps = 40/216 (18%)
Query: 294 FDESRIIGRGGFGNV--YFGLLGDREAAIKKM-----RSNKSKEFFAELKVLCKIHH--- 343
+ + + IG G G V F + A+KK+ +K + EL +L ++H
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 85
Query: 344 ---INVF-----ISTFGNGSLSDHLHDPLLKG--HQPLTWTARTQIALDAAKGIEYIHDH 393
+NVF + F + L L D L H L + + GI+++H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLH-- 143
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
A +HRD+K SNI++ K+ DFGL RT + T V T Y PE I
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLA----RTACTNFMMTPYVVTRYYRAPEVI- 197
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ + D+++ G ++ EL+ G
Sbjct: 198 ------------LGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 112/266 (42%), Gaps = 57/266 (21%)
Query: 300 IGRGGFGNVYFGLLGD--REAAIKKM---RSNKSKEFFAELKVLCKIHHINV-----FIS 349
+G GG G V+ + D + AIKK+ K E+K++ ++ H N+ +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 350 TFGN------GSLSD-------------HLHDPLLKGHQPLTWTARTQIALDAAKGIEYI 390
G+ GSL++ L + L +G PL +G++YI
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQG--PLLEEHARLFMYQLLRGLKYI 136
Query: 391 HDHTKARYVHRDIKTSNILLD-DGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPGYLP 448
H A +HRD+K +N+ ++ + L K+ DFGL + ++ + K L+ LV T Y
Sbjct: 137 H---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV-TKWYRS 192
Query: 449 PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSLIT 508
P + T D++A G + AE++TGK L E +M+ ++
Sbjct: 193 PRLLLSPN------------NYTKAIDMWAAGCIFAEMLTGK-TLFAGAHELEQMQLILE 239
Query: 509 IMAAVAEWCLNEDAVDRPEMRDIVAI 534
+ V E DR E+ ++ +
Sbjct: 240 SIPVVHEE-------DRQELLSVIPV 258
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 19/94 (20%)
Query: 399 VHRDIKTSNILL---DDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVK 455
VHRD+K N+LL G K+ADFGL +E + +++ GTPGYL PE +
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFG--FAGTPGYLSPEVL--- 178
Query: 456 RFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
R D + D++A GV+L L+ G
Sbjct: 179 --RKDPYGK--------PVDMWACGVILYILLVG 202
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 44/238 (18%)
Query: 276 SERTIIFSLEEIEEAT----NNFDESRIIGRGGFGNV--YFGLLGDREAAIKKM-----R 324
S+R F EI ++T + + IG G G V + + +R AIKK+
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 63
Query: 325 SNKSKEFFAELKVLCKIHHINV--FISTFG-NGSLSDHLHDPLLKGHQPLTWTARTQIAL 381
+K + EL ++ ++H N+ ++ F SL + ++ + Q+ L
Sbjct: 64 QTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMEL 123
Query: 382 DAAK----------GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTN 431
D + GI+++H A +HRD+K SNI++ K+ DFGL RT
Sbjct: 124 DHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLA----RTA 176
Query: 432 EKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ T V T Y PE I ++ D+++ G ++ E+I G
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYK-------------ENVDIWSVGCIMGEMIKG 221
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 87/217 (40%), Gaps = 40/217 (18%)
Query: 294 FDESRIIGRGGFGNV--YFGLLGDREAAIKKM-----RSNKSKEFFAELKVLCKIHHINV 346
+ + IG G G V + + DR AIKK+ +K + EL ++ ++H N+
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 347 --FISTFGNGSLSDHLHDP-LLKGHQPLTWTARTQIALDAAK----------GIEYIHDH 393
++ F + D L+ Q+ LD + GI+++H
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS- 137
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
A +HRD+K SNI++ K+ DFGL RT + T V T Y PE I
Sbjct: 138 --AGIIHRDLKPSNIVVKSDCTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVIL 191
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
++ D+++ G ++ E++ K
Sbjct: 192 GMGYK-------------ENVDIWSVGCIMGEMVRHK 215
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 40/211 (18%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKM-----RSNKSKEFFAELKVLCKIHHINV--FIST 350
IG G G V + + DR AIKK+ +K + EL ++ ++H N+ ++
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 90
Query: 351 FGNGSLSDHLHDP-LLKGHQPLTWTARTQIALDAAK----------GIEYIHDHTKARYV 399
F + D L+ Q+ LD + GI+++H A +
Sbjct: 91 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGII 147
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SNI++ K+ DFGL RT + T V T Y PE I ++
Sbjct: 148 HRDLKPSNIVVKSDCTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILGMGYK- 202
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
D+++ G ++ E++ K
Sbjct: 203 ------------ENVDIWSVGCIMGEMVRHK 221
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 23/150 (15%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLD--DGLRAKVADFGLVKLEERTNEKEMLATRLVGT 443
G+ Y H + HRD+K N LLD R K+ADFG K ++ + VGT
Sbjct: 127 GVSYAH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPK----SAVGT 179
Query: 444 PGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKM 503
P Y+ PE + K + + DV++ GV L ++ G D EP
Sbjct: 180 PAYIAPEVLLKKEYDGKV------------ADVWSCGVTLYVMLVGAYPF-EDPEEPKNF 226
Query: 504 KSLITIMAAVAEWCLNEDAVDRPEMRDIVA 533
+ I + V ++ + + PE R +++
Sbjct: 227 RKTIHRILNV-QYAIPDYVHISPECRHLIS 255
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 87/217 (40%), Gaps = 40/217 (18%)
Query: 294 FDESRIIGRGGFGNV--YFGLLGDREAAIKKM-----RSNKSKEFFAELKVLCKIHHINV 346
+ + IG G G V + + DR AIKK+ +K + EL ++ ++H N+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 347 --FISTFGNGSLSDHLHDP-LLKGHQPLTWTARTQIALDAAK----------GIEYIHDH 393
++ F + D L+ Q+ LD + GI+++H
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 137
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
A +HRD+K SNI++ K+ DFGL RT + T V T Y PE I
Sbjct: 138 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVIL 192
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
++ D+++ G ++ E++ K
Sbjct: 193 GMGYK-------------ENVDIWSVGCIMGEMVRHK 216
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 87/217 (40%), Gaps = 40/217 (18%)
Query: 294 FDESRIIGRGGFGNV--YFGLLGDREAAIKKM-----RSNKSKEFFAELKVLCKIHHINV 346
+ + IG G G V + + DR AIKK+ +K + EL ++ ++H N+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 347 --FISTFGNGSLSDHLHDP-LLKGHQPLTWTARTQIALDAAK----------GIEYIHDH 393
++ F + D L+ Q+ LD + GI+++H
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS- 138
Query: 394 TKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
A +HRD+K SNI++ K+ DFGL RT + T V T Y PE I
Sbjct: 139 --AGIIHRDLKPSNIVVKSDCTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVIL 192
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
++ D+++ G ++ E++ K
Sbjct: 193 GMGYK-------------ENVDIWSVGCIMGEMVRHK 216
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+E +H + VH D+K +N L+ DG+ K+ DFG+ + + + ++ VGT Y
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIAN-QMQPDTTSVVKDSQVGTVNY 178
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSL 506
+PPE I K + + +++ K+DV++ G +L + GK + ++ +K+ ++
Sbjct: 179 MPPEAI--KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 236
Query: 507 I 507
I
Sbjct: 237 I 237
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 32/179 (17%)
Query: 379 IALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLAT 438
+ AKG+ ++ +HRD+ NILL G K+ DFGL + + N+ +
Sbjct: 168 FSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR--DIKNDSNYVVK 222
Query: 439 RLVGTP-GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDD 497
P ++ PE IF + F+ +DV+++G+ L EL + +
Sbjct: 223 GNARLPVKWMAPESIFNCVYTFE-------------SDVWSYGIFLWELFSLGSSPYPGM 269
Query: 498 SEPTKMKSLI-------------TIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITST 543
+K +I M + + C + D + RP + IV ++ + + ST
Sbjct: 270 PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 328
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 32/179 (17%)
Query: 379 IALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLAT 438
+ AKG+ ++ +HRD+ NILL G K+ DFGL + + N+ +
Sbjct: 166 FSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR--DIKNDSNYVVK 220
Query: 439 RLVGTP-GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDD 497
P ++ PE IF + F+ +DV+++G+ L EL + +
Sbjct: 221 GNARLPVKWMAPESIFNCVYTFE-------------SDVWSYGIFLWELFSLGSSPYPGM 267
Query: 498 SEPTKMKSLI-------------TIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITST 543
+K +I M + + C + D + RP + IV ++ + + ST
Sbjct: 268 PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 326
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 32/180 (17%)
Query: 378 QIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLA 437
+ AKG+ ++ +HRD+ NILL G K+ DFGL + + N+ +
Sbjct: 149 SFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR--DIKNDSNYVV 203
Query: 438 TRLVGTP-GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
P ++ PE IF + F+ +DV+++G+ L EL + +
Sbjct: 204 KGNARLPVKWMAPESIFNCVYTFE-------------SDVWSYGIFLWELFSLGSSPYPG 250
Query: 497 DSEPTKMKSLI-------------TIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITST 543
+K +I M + + C + D + RP + IV ++ + + ST
Sbjct: 251 MPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 44/238 (18%)
Query: 276 SERTIIFSLEEIEEAT----NNFDESRIIGRGGFGNV--YFGLLGDREAAIKKM-----R 324
S+R F EI ++T + + IG G G V + + +R AIKK+
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 63
Query: 325 SNKSKEFFAELKVLCKIHHINV--FISTFG-NGSLSDHLHDPLLKGHQPLTWTARTQIAL 381
+K + EL ++ ++H N+ ++ F SL + ++ + Q+ L
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMEL 123
Query: 382 DAAK----------GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTN 431
D + GI+++H A +HRD+K SNI++ K+ DFGL RT
Sbjct: 124 DHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLA----RTA 176
Query: 432 EKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ T V T Y PE I ++ D+++ G ++ E+I G
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYK-------------ENVDIWSVGCIMGEMIKG 221
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+E +H + VH D+K +N L+ DG+ K+ DFG+ + + + ++ VGT Y
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIAN-QMQPDTTSVVKDSQVGTVNY 174
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSL 506
+PPE I K + + +++ K+DV++ G +L + GK + ++ +K+ ++
Sbjct: 175 MPPEAI--KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 232
Query: 507 I 507
I
Sbjct: 233 I 233
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 32/179 (17%)
Query: 379 IALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLAT 438
+ AKG+ ++ +HRD+ NILL G K+ DFGL + + N+ +
Sbjct: 173 FSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR--DIKNDSNYVVK 227
Query: 439 RLVGTP-GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDD 497
P ++ PE IF + F+ +DV+++G+ L EL + +
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFE-------------SDVWSYGIFLWELFSLGSSPYPGM 274
Query: 498 SEPTKMKSLI-------------TIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITST 543
+K +I M + + C + D + RP + IV ++ + + ST
Sbjct: 275 PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 333
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 97/238 (40%), Gaps = 44/238 (18%)
Query: 276 SERTIIFSLEEIEEAT----NNFDESRIIGRGGFGNV--YFGLLGDREAAIKKM-----R 324
S+R F EI ++T + + IG G G V + + +R AIKK+
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 63
Query: 325 SNKSKEFFAELKVLCKIHHINV--FISTFG-NGSLSDHLHDPLLKGHQPLTWTARTQIAL 381
+K + EL ++ ++H N+ ++ F SL + ++ Q+ L
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL 123
Query: 382 DAAK----------GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTN 431
D + GI+++H A +HRD+K SNI++ K+ DFGL RT
Sbjct: 124 DHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLA----RTA 176
Query: 432 EKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ T V T Y PE I ++ D+++ G ++ E+I G
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYK-------------ENVDIWSVGCIMGEMIKG 221
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 87/224 (38%), Gaps = 50/224 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFGLLG--DREAAIKKMRS------------NKSKEFFAELK- 336
+FD R+IGRG + V L DR A+K ++ K F +
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 79
Query: 337 --VLCKIH-------HINVFISTFGNGSLSDHLHDPL-LKGHQPLTWTARTQIALDAAKG 386
L +H + I G L H+ L ++A +AL+
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN---- 135
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
Y+H+ ++RD+K N+LLD K+ D+G+ K R + + GTP Y
Sbjct: 136 --YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSXFCGTPNY 187
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
+ PE + + + F D +A GV++ E++ G+
Sbjct: 188 IAPEILRGEDYGF-------------SVDWWALGVLMFEMMAGR 218
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 44/238 (18%)
Query: 276 SERTIIFSLEEIEEAT----NNFDESRIIGRGGFGNV--YFGLLGDREAAIKKM-----R 324
S+R F EI ++T + + IG G G V + + +R AIKK+
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 63
Query: 325 SNKSKEFFAELKVLCKIHHINV--FISTFG-NGSLSDHLHDPLLKGHQPLTWTARTQIAL 381
+K + EL ++ ++H N+ ++ F SL + ++ + Q+ L
Sbjct: 64 QTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMEL 123
Query: 382 DAAK----------GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTN 431
D + GI+++H A +HRD+K SNI++ K+ DFGL RT
Sbjct: 124 DHERMSYLLYQMLVGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLA----RTA 176
Query: 432 EKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ T V T Y PE I ++ D+++ G ++ E+I G
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYK-------------ENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 97/238 (40%), Gaps = 44/238 (18%)
Query: 276 SERTIIFSLEEIEEAT----NNFDESRIIGRGGFGNV--YFGLLGDREAAIKKM-----R 324
S+R F EI ++T + + IG G G V + + +R AIKK+
Sbjct: 5 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 64
Query: 325 SNKSKEFFAELKVLCKIHHINV--FISTFG-NGSLSDHLHDPLLKGHQPLTWTARTQIAL 381
+K + EL ++ ++H N+ ++ F SL + ++ Q+ L
Sbjct: 65 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL 124
Query: 382 DAAK----------GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTN 431
D + GI+++H A +HRD+K SNI++ K+ DFGL RT
Sbjct: 125 DHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLA----RTA 177
Query: 432 EKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ T V T Y PE I ++ D+++ G ++ E+I G
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILGMGYK-------------ENVDIWSVGCIMGEMIKG 222
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 83/206 (40%), Gaps = 34/206 (16%)
Query: 300 IGRGGFGNVYFGLLGDREA-AIKKMRSNKSKE-----FFAELKVLCKIHHINVF-----I 348
IG G +G VY E A+KK+R K E E+ +L ++ H N+ I
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 349 STFGNGSLS-DHLHDPLLK----GHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDI 403
T L +HL L K L L GI Y HD R +HRD+
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDL 126
Query: 404 KTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHS 463
K N+L++ K+ADFGL + K T V T Y P+ + +
Sbjct: 127 KPQNLLINREGELKIADFGLARAFGIPVRK---YTHEVVTLWYRAPDVLMGSK------- 176
Query: 464 SVMELQVTTKTDVFAFGVVLAELITG 489
+ +T D+++ G + AE++ G
Sbjct: 177 -----KYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 83/206 (40%), Gaps = 34/206 (16%)
Query: 300 IGRGGFGNVYFGLLGDREA-AIKKMRSNKSKE-----FFAELKVLCKIHHINVF-----I 348
IG G +G VY E A+KK+R K E E+ +L ++ H N+ I
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 349 STFGNGSLS-DHLHDPLLK----GHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDI 403
T L +HL L K L L GI Y HD R +HRD+
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDL 126
Query: 404 KTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHS 463
K N+L++ K+ADFGL + K T V T Y P+ + +
Sbjct: 127 KPQNLLINREGELKIADFGLARAFGIPVRK---YTHEVVTLWYRAPDVLMGSK------- 176
Query: 464 SVMELQVTTKTDVFAFGVVLAELITG 489
+ +T D+++ G + AE++ G
Sbjct: 177 -----KYSTTIDIWSVGCIFAEMVNG 197
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 97/238 (40%), Gaps = 57/238 (23%)
Query: 300 IGRGGFGNVYFGLL--GDREAAIKKM--RSNKSKEF-FAELKVLCKIHHINVF------- 347
IG G G V + + A+KKM R + +E F E+ ++ H NV
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 348 --------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
+ G+L+D + H + + L + + +H +
Sbjct: 142 VGDELWVVMEFLEGGALTD------IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VI 192
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRDIK+ +ILL R K++DFG + +++ LVGTP ++ PE I
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFCA---QVSKEVPRRKXLVGTPYWMAPELI------- 242
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGKRA-----------LIRDDSEPTKMKSL 506
L + D+++ G+++ E++ G+ +IRD+ P ++K+L
Sbjct: 243 ------SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-PPRLKNL 293
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+E +H + VH D+K +N L+ DG+ K+ DFG+ + + + ++ VGT Y
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIAN-QMQPDXXXVVKDSQVGTVNY 194
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSL 506
+PPE I K + + +++ K+DV++ G +L + GK + ++ +K+ ++
Sbjct: 195 MPPEAI--KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 252
Query: 507 I 507
I
Sbjct: 253 I 253
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+E +H + VH D+K +N L+ DG+ K+ DFG+ + + + ++ VGT Y
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIAN-QMQPDTTSVVKDSQVGTVNY 194
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSL 506
+PPE I K + + +++ K+DV++ G +L + GK + ++ +K+ ++
Sbjct: 195 MPPEAI--KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 252
Query: 507 I 507
I
Sbjct: 253 I 253
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 76/160 (47%), Gaps = 17/160 (10%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+E +H + VH D+K +N L+ DG+ K+ DFG+ + + + ++ VGT Y
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIAN-QMQPDTTSVVKDSQVGTVNY 175
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSL 506
+PPE I K + + +++ K+DV++ G +L + GK + ++ +K+ ++
Sbjct: 176 MPPEAI--KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 233
Query: 507 I-------------TIMAAVAEWCLNEDAVDRPEMRDIVA 533
I + V + CL D R + +++A
Sbjct: 234 IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 273
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 103/262 (39%), Gaps = 58/262 (22%)
Query: 284 LEEIEEATNNFDESRIIGRGGFGNVYFGLLGDREA---AIKKMRSNKS------------ 328
+ E+ + + R I G +G V G+ D E AIK++ + S
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGV--DSEGIPVAIKRVFNTVSDGRTVNILSDSF 71
Query: 329 --KEFFAELKVLCKIHHINVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIA------ 380
K E+++L HH N+ G + H +P + +T RT +A
Sbjct: 72 LCKRVLREIRLLNHFHHPNIL----GLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQ 127
Query: 381 --LDAAKGIEYIHDHT--------KARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERT 430
+ + + I+Y H +A VHRD+ NILL D + DF L R
Sbjct: 128 RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA----RE 183
Query: 431 NEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTK-TDVFAFGVVLAELITG 489
+ + T V Y PE VM+ + TK D+++ G V+AE+
Sbjct: 184 DTADANKTHYVTHRWYRAPEL-------------VMQFKGFTKLVDMWSAGCVMAEMF-N 229
Query: 490 KRALIRDDSEPTKMKSLITIMA 511
++AL R + ++ ++ ++
Sbjct: 230 RKALFRGSTFYNQLNKIVEVVG 251
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 72/179 (40%), Gaps = 32/179 (17%)
Query: 379 IALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLAT 438
+ AKG+ ++ +HRD+ NILL G K+ DFGL + N+ +
Sbjct: 173 FSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR--HIKNDSNYVVK 227
Query: 439 RLVGTP-GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDD 497
P ++ PE IF + F+ +DV+++G+ L EL + +
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFE-------------SDVWSYGIFLWELFSLGSSPYPGM 274
Query: 498 SEPTKMKSLI-------------TIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITST 543
+K +I M + + C + D + RP + IV ++ + + ST
Sbjct: 275 PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 333
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 48/217 (22%)
Query: 299 IIGRGGFGNVYFG--LLGDREAAIKKM---RSNKSKEFFAELKVLCKIHH---------- 343
++G+G +G VY G L AIK++ S S+ E+ + + H
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 344 -----INVFISTFGNGSLSDHLHD---PLLKGHQPLTWTARTQIALDAAKGIEYIHDHTK 395
I +F+ GSLS L PL Q + + + + +G++Y+HD+
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHDN-- 141
Query: 396 ARYVHRDIKTSNILLD--DGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIF 453
+ VHRDIK N+L++ G+ K++DFG K N GT Y+ PE I
Sbjct: 142 -QIVHRDIKGDNVLINTYSGV-LKISDFGTSKRLAGINP---CTETFTGTLQYMAPE-II 195
Query: 454 VKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
K R D+++ G + E+ TGK
Sbjct: 196 DKGPR----------GYGKAADIWSLGCTIIEMATGK 222
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 97/238 (40%), Gaps = 44/238 (18%)
Query: 276 SERTIIFSLEEIEEAT----NNFDESRIIGRGGFGNV--YFGLLGDREAAIKKM-----R 324
S+R F EI ++T + + IG G G V + + +R AIKK+
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 63
Query: 325 SNKSKEFFAELKVLCKIHHINV--FISTFG-NGSLSDHLHDPLLKGHQPLTWTARTQIAL 381
+K + EL ++ ++H N+ ++ F SL + ++ Q+ L
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL 123
Query: 382 DAAK----------GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTN 431
D + GI+++H A +HRD+K SNI++ K+ DFGL RT
Sbjct: 124 DHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLA----RTA 176
Query: 432 EKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ T V T Y PE I ++ D+++ G ++ E+I G
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYK-------------ENVDIWSVGCIMGEMIKG 221
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 19/94 (20%)
Query: 399 VHRDIKTSNILLDDGLRA---KVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVK 455
VHRD+K N+LL L+ K+ADFGL +E ++ GTPGYL PE +
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFG--FAGTPGYLSPEVL--- 196
Query: 456 RFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
R D + D++A GV+L L+ G
Sbjct: 197 --RKDPYGK--------PVDLWACGVILYILLVG 220
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 15/109 (13%)
Query: 378 QIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLA 437
+IA+ K +E H H+K +HRD+K SN+L++ + K+ DFG+ K++ A
Sbjct: 113 KIAVSIVKALE--HLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 438 TRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
G Y+ PE I + + + + K+D+++ G+ + EL
Sbjct: 171 ----GCKPYMAPERI---------NPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 103/262 (39%), Gaps = 58/262 (22%)
Query: 284 LEEIEEATNNFDESRIIGRGGFGNVYFGLLGDREA---AIKKMRSNKS------------ 328
+ E+ + + R I G +G V G+ D E AIK++ + S
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGV--DSEGIPVAIKRVFNTVSDGRTVNILSDSF 71
Query: 329 --KEFFAELKVLCKIHHINVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIA------ 380
K E+++L HH N+ G + H +P + +T RT +A
Sbjct: 72 LCKRVLREIRLLNHFHHPNIL----GLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQ 127
Query: 381 --LDAAKGIEYIHDHT--------KARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERT 430
+ + + I+Y H +A VHRD+ NILL D + DF L R
Sbjct: 128 RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA----RE 183
Query: 431 NEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTK-TDVFAFGVVLAELITG 489
+ + T V Y PE VM+ + TK D+++ G V+AE+
Sbjct: 184 DTADANKTHYVTHRWYRAPEL-------------VMQFKGFTKLVDMWSAGCVMAEMF-N 229
Query: 490 KRALIRDDSEPTKMKSLITIMA 511
++AL R + ++ ++ ++
Sbjct: 230 RKALFRGSTFYNQLNKIVEVVG 251
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 97/238 (40%), Gaps = 57/238 (23%)
Query: 300 IGRGGFGNVYFGLL--GDREAAIKKM--RSNKSKEF-FAELKVLCKIHHINVF------- 347
IG G G V + + A+KKM R + +E F E+ ++ H NV
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 348 --------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYV 399
+ G+L+D + H + + L + + +H +
Sbjct: 219 VGDELWVVMEFLEGGALTD------IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VI 269
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRDIK+ +ILL R K++DFG + +++ LVGTP ++ PE I
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDFGFCA---QVSKEVPRRKXLVGTPYWMAPELI------- 319
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGKRA-----------LIRDDSEPTKMKSL 506
L + D+++ G+++ E++ G+ +IRD+ P ++K+L
Sbjct: 320 ------SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-PPRLKNL 370
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 87/224 (38%), Gaps = 50/224 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFGLLG--DREAAIKKMRS------------NKSKEFFAELK- 336
+FD R+IGRG + V L DR A+K ++ K F +
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 64
Query: 337 --VLCKIH-------HINVFISTFGNGSLSDHLHDPL-LKGHQPLTWTARTQIALDAAKG 386
L +H + I G L H+ L ++A +AL+
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN---- 120
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
Y+H+ ++RD+K N+LLD K+ D+G+ K R + + GTP Y
Sbjct: 121 --YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSXFCGTPNY 172
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
+ PE + + + F D +A GV++ E++ G+
Sbjct: 173 IAPEILRGEDYGF-------------SVDWWALGVLMFEMMAGR 203
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 86/215 (40%), Gaps = 49/215 (22%)
Query: 298 RIIGRGGFGNVYF---GLLGDREA--AIKKMRSNKSKEFFAELKVLCKIHHINVF----- 347
++G G F V+ L G A IKK + + E+ VL KI H N+
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 348 ----------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKAR 397
+ G L D + L +G T + + ++Y+H++
Sbjct: 75 YESTTHYYLVMQLVSGGELFDRI---LERG--VYTEKDASLVIQQVLSAVKYLHENG--- 126
Query: 398 YVHRDIKTSNILL---DDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFV 454
VHRD+K N+L ++ + + DFGL K+E+ + + GTPGY+ PE +
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-----IMSTACGTPGYVAPEVLAQ 181
Query: 455 KRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
K + + D ++ GV+ L+ G
Sbjct: 182 KPY-------------SKAVDCWSIGVITYILLCG 203
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 83/206 (40%), Gaps = 34/206 (16%)
Query: 300 IGRGGFGNVYFGLLGDREA-AIKKMRSNKSKE-----FFAELKVLCKIHHINVF-----I 348
IG G +G VY E A+KK+R K E E+ +L ++ H N+ I
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 349 STFGNGSLS-DHLHDPLLK----GHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDI 403
T L +HL L K L L GI Y HD R +HRD+
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDL 126
Query: 404 KTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHS 463
K N+L++ K+ADFGL + K T + T Y P+ + +
Sbjct: 127 KPQNLLINREGELKIADFGLARAFGIPVRK---YTHEIVTLWYRAPDVLMGSK------- 176
Query: 464 SVMELQVTTKTDVFAFGVVLAELITG 489
+ +T D+++ G + AE++ G
Sbjct: 177 -----KYSTTIDIWSVGCIFAEMVNG 197
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 51/263 (19%)
Query: 299 IIGRGGFGNVYFGLL--GDREAAIKKMRSNKSKEFFAELKVLCKIHHINVFISTFGNG-- 354
++G GGFG+VY G+ + AIK + ++ ++ EL ++ V + +G
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVPMEVVLLKKVSSGFS 69
Query: 355 ---SLSDHLHDP-----LLKGHQPLT-----WTARTQIALDAAKG-----IEYIHDHTKA 396
L D P +L+ +P+ T R + + A+ +E +
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNX 129
Query: 397 RYVHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVK 455
+HRDIK NIL+D + K+ DFG L K+ + T GT Y PPE+I
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGAL-----LKDTVYTDFDGTRVYSPPEWIRYH 184
Query: 456 RFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSLITIMAAVA- 514
R+ V++ G++L +++ G D+ ++ + V+
Sbjct: 185 RYH------------GRSAAVWSLGILLYDMVCGDIPFEHDEE---IIRGQVFFRQRVSX 229
Query: 515 ------EWCLNEDAVDRPEMRDI 531
WCL DRP +I
Sbjct: 230 ECQHLIRWCLALRPSDRPTFEEI 252
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 89/229 (38%), Gaps = 49/229 (21%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYF------GLLGDREAAIKKMRSNKSKEFFAELKVL 338
++ E+ F+ +G G F V G L + KK K E+ VL
Sbjct: 15 KQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVL 74
Query: 339 CKIHHINVF---------------ISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDA 383
KI H N+ + G L D + + + + R LDA
Sbjct: 75 RKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQ--VLDA 132
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILL---DDGLRAKVADFGLVKLEERTNEKEMLATRL 440
+ Y+H + VHRD+K N+L D+ + ++DFGL K+E + + + +
Sbjct: 133 ---VYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD----VMSTA 182
Query: 441 VGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
GTPGY+ PE + K + + D ++ GV+ L+ G
Sbjct: 183 CGTPGYVAPEVLAQKPY-------------SKAVDCWSIGVIAYILLCG 218
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+E +H + VH D+K +N L+ DG+ K+ DFG+ + + + ++ VGT Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIAN-QMQPDTTSVVKDSQVGTVNY 222
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSL 506
+PPE I K + + +++ K+DV++ G +L + GK + ++ +K+ ++
Sbjct: 223 MPPEAI--KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 280
Query: 507 I 507
I
Sbjct: 281 I 281
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 25/118 (21%)
Query: 373 WTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNE 432
++A +AL+ Y+H+ ++RD+K N+LLD K+ D+G+ K R +
Sbjct: 158 YSAEISLALN------YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 208
Query: 433 KEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
+ GTP Y+ PE + + + F D +A GV++ E++ G+
Sbjct: 209 T---TSTFCGTPNYIAPEILRGEDYGF-------------SVDWWALGVLMFEMMAGR 250
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+++D KV DFG K ++ RT L GTP
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-------WXLCGTPE 204
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 205 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 51/220 (23%)
Query: 300 IGRGGFGNVYFGLLGD--REAAIKKMRSNKSKEFFA-----ELKVLCKIHHINV------ 346
IG+G FG V+ ++ A+KK+ KE F E+K+L + H NV
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 347 ----------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYI 390
+ F L+ L + L+K T + ++ G+ YI
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK----FTLSEIKRVMQMLLNGLYYI 141
Query: 391 HDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEE--RTNEKEMLATRLVGTPGYLP 448
H + + +HRD+K +N+L+ K+ADFGL + + ++ R+V T Y P
Sbjct: 142 H---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRP 197
Query: 449 PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
PE + +R D++ G ++AE+ T
Sbjct: 198 PELLLGER------------DYGPPIDLWGAGCIMAEMWT 225
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+++D KV DFG K ++ RT L GTP
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-------WXLCGTPE 204
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 205 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+++D KV DFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+E +H + VH D+K +N L+ DG+ K+ DFG+ + + + ++ VGT Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIAN-QMQPDTTSVVKDSQVGTVNY 222
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSL 506
+PPE I K + + +++ K+DV++ G +L + GK + ++ +K+ ++
Sbjct: 223 MPPEAI--KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 280
Query: 507 I 507
I
Sbjct: 281 I 281
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+++D KV DFG K ++ RT L GTP
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-------WXLCGTPE 204
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 205 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+++D KV DFG K ++ RT L GTP
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-------WXLCGTPE 204
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 205 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+++D +V DFGL K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+++D KV DFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 51/231 (22%)
Query: 289 EATNNFDESRIIGRGGFGNVYFGLLGD--REAAIKKMRSNKSKEFFA-----ELKVLCKI 341
+ + +++ IG+G FG V+ ++ A+KK+ KE F E+K+L +
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 342 HHINV----------------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQI 379
H NV + F L+ L + L+K T + ++
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK----FTLSEIKRV 130
Query: 380 ALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEE--RTNEKEMLA 437
G+ YIH + + +HRD+K +N+L+ K+ADFGL + + ++
Sbjct: 131 MQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 438 TRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
R+V T Y PPE + +R D++ G ++AE+ T
Sbjct: 188 NRVV-TLWYRPPELLLGER------------DYGPPIDLWGAGCIMAEMWT 225
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 96/230 (41%), Gaps = 51/230 (22%)
Query: 289 EATNNFDESR---IIGRGGFGNVYFG--LLGDREAAIKKM---RSNKSKEFFAELKVLCK 340
E +DE+ ++G+G +G VY G L AIK++ S S+ E+ +
Sbjct: 2 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH 61
Query: 341 IHH---------------INVFISTFGNGSLSDHLHD---PLLKGHQPLTWTARTQIALD 382
+ H I +F+ GSLS L PL Q + + + +
Sbjct: 62 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL--- 118
Query: 383 AAKGIEYIHDHTKARYVHRDIKTSNILLD--DGLRAKVADFGLVKLEERTNEKEMLATRL 440
+G++Y+HD+ + VHRDIK N+L++ G+ K++DFG K N
Sbjct: 119 --EGLKYLHDN---QIVHRDIKGDNVLINTYSGV-LKISDFGTSKRLAGINP---CTETF 169
Query: 441 VGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
GT Y+ PE I K R D+++ G + E+ TGK
Sbjct: 170 TGTLQYMAPE-IIDKGPR----------GYGKAADIWSLGCTIIEMATGK 208
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 90/227 (39%), Gaps = 59/227 (25%)
Query: 294 FDESRIIGRGGFGNVYFG-LLGDREAAIKKMRSNKSKEFFAELKVLCKIHHINVF---IS 349
+ ++IG G FG V+ L+ E AIKK+ +K + EL+++ + H NV
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKN-RELQIMRIVKHPNVVDLKAF 100
Query: 350 TFGNGSLSDHLHDPLLKGHQPLT-WTARTQIA---------------LDAAKGIEYIHDH 393
+ NG D + L+ + P T + A A + + YIH
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS- 159
Query: 394 TKARYVHRDIKTSNILLD--DGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG------ 445
HRDIK N+LLD G+ K+ DFG K+ + G P
Sbjct: 160 --IGICHRDIKPQNLLLDPPSGV-LKLIDFGSAKI------------LIAGEPNVSXICS 204
Query: 446 --YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
Y PE IF TT D+++ G V+AEL+ G+
Sbjct: 205 RYYRAPELIF------------GATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 300 IGRGGFGNVYFGLLGDR----EAAIKKMRSNKSK----EFFAELKVL------------- 338
+G G FG+V G+ R + AIK ++ K E E +++
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 339 -CKIHHINVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKAR 397
C+ + + + G G L H L+ + + + ++ + G++Y+ +
Sbjct: 78 VCQAEALMLVMEMAGGGPL----HKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN--- 130
Query: 398 YVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRF 457
+VHRD+ N+LL + AK++DFGL K + + + PE I ++F
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 190
Query: 458 RFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
++++DV+++GV + E ++
Sbjct: 191 -------------SSRSDVWSYGVTMWEALS 208
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 97/238 (40%), Gaps = 44/238 (18%)
Query: 276 SERTIIFSLEEIEEAT----NNFDESRIIGRGGFGNV--YFGLLGDREAAIKKM-----R 324
S+R F EI ++T + + IG G G V + + +R AIKK+
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 63
Query: 325 SNKSKEFFAELKVLCKIHHINV--FISTFG-NGSLSDHLHDPLLKGHQPLTWTARTQIAL 381
+K + EL ++ ++H N+ ++ F SL + ++ Q+ L
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL 123
Query: 382 DAAK----------GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTN 431
D + GI+++H A +HRD+K SNI++ K+ DFGL RT
Sbjct: 124 DHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLA----RTA 176
Query: 432 EKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ T V T Y PE I ++ D+++ G ++ E+I G
Sbjct: 177 GTSFMMTPEVVTRYYRAPEVILGMGYK-------------ENVDIWSVGCIMGEMIKG 221
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 51/231 (22%)
Query: 289 EATNNFDESRIIGRGGFGNVYFGLLGD--REAAIKKMRSNKSKEFFA-----ELKVLCKI 341
+ + +++ IG+G FG V+ ++ A+KK+ KE F E+K+L +
Sbjct: 14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 73
Query: 342 HHINV----------------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQI 379
H NV + F L+ L + L+K T + ++
Sbjct: 74 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK----FTLSEIKRV 129
Query: 380 ALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEE--RTNEKEMLA 437
G+ YIH + + +HRD+K +N+L+ K+ADFGL + + ++
Sbjct: 130 MQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 186
Query: 438 TRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
R+V T Y PPE + +R D++ G ++AE+ T
Sbjct: 187 NRVV-TLWYRPPELLLGER------------DYGPPIDLWGAGCIMAEMWT 224
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 51/231 (22%)
Query: 289 EATNNFDESRIIGRGGFGNVYFGLLGD--REAAIKKMRSNKSKEFFA-----ELKVLCKI 341
+ + +++ IG+G FG V+ ++ A+KK+ KE F E+K+L +
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 342 HHINV----------------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQI 379
H NV + F L+ L + L+K T + ++
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK----FTLSEIKRV 130
Query: 380 ALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEE--RTNEKEMLA 437
G+ YIH + + +HRD+K +N+L+ K+ADFGL + + ++
Sbjct: 131 MQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 438 TRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
R+V T Y PPE + +R D++ G ++AE+ T
Sbjct: 188 NRVV-TLWYRPPELLLGER------------DYGPPIDLWGAGCIMAEMWT 225
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 24/112 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDD 497
YL PE I K + D +A GV++ E+ G D+
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFADE 242
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 24/134 (17%)
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLV 441
KG+ + H +HRD+K N+L++ K+ADFGL + + R E++
Sbjct: 112 KGLGFCHSRN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV----- 163
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPT 501
T Y PP+ +F + +T D+++ G + AEL R L +
Sbjct: 164 -TLWYRPPDVLFGAKL------------YSTSIDMWSAGCIFAELANAARPLFPGNDVDD 210
Query: 502 KMKSLITIMAAVAE 515
++K + ++ E
Sbjct: 211 QLKRIFRLLGTPTE 224
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D+ +V DFG K ++ RT L GTP
Sbjct: 141 FEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 190
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 191 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 228
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 87/224 (38%), Gaps = 50/224 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFGLLG--DREAAIKKMRS------------NKSKEFFAELK- 336
+FD R+IGRG + V L DR A+K ++ K F +
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68
Query: 337 --VLCKIH-------HINVFISTFGNGSLSDHLHDPL-LKGHQPLTWTARTQIALDAAKG 386
L +H + I G L H+ L ++A +AL+
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN---- 124
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
Y+H+ ++RD+K N+LLD K+ D+G+ K R + + GTP Y
Sbjct: 125 --YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSXFCGTPNY 176
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
+ PE + + + F D +A GV++ E++ G+
Sbjct: 177 IAPEILRGEDYGF-------------SVDWWALGVLMFEMMAGR 207
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 23/150 (15%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDD--GLRAKVADFGLVKLEERTNEKEMLATRLVGT 443
G+ Y H + HRD+K N LLD R K+ DFG K ++ + VGT
Sbjct: 126 GVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK----STVGT 178
Query: 444 PGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKM 503
P Y+ PE + K + + DV++ GV L ++ G D EP
Sbjct: 179 PAYIAPEVLLKKEYDGKV------------ADVWSCGVTLYVMLVGAYPF-EDPEEPKNF 225
Query: 504 KSLITIMAAVAEWCLNEDAVDRPEMRDIVA 533
+ I + V ++ + + PE R +++
Sbjct: 226 RKTIHRILNV-QYAIPDYVHISPECRHLIS 254
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 23/150 (15%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLD--DGLRAKVADFGLVKLEERTNEKEMLATRLVGT 443
G+ Y H + HRD+K N LLD R K+ DFG K ++ + VGT
Sbjct: 127 GVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK----STVGT 179
Query: 444 PGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKM 503
P Y+ PE + K + + DV++ GV L ++ G D EP
Sbjct: 180 PAYIAPEVLLKKEYDGKV------------ADVWSCGVTLYVMLVGAYPF-EDPEEPKNF 226
Query: 504 KSLITIMAAVAEWCLNEDAVDRPEMRDIVA 533
+ I + V ++ + + PE R +++
Sbjct: 227 RKTIHRILNV-QYAIPDYVHISPECRHLIS 255
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLAGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 21/131 (16%)
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
+G++++H + VHRD+K NIL+ G K+ADFGL R +M +V T
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA----RIYSYQMALAPVVVTL 175
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMK 504
Y PE + + T D+++ G + AE+ ++ L +SE ++
Sbjct: 176 WYRAPEVLLQSTY-------------ATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLG 221
Query: 505 SLITIMAAVAE 515
+ ++ E
Sbjct: 222 KIFDLIGLPPE 232
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 175 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 224
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 225 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 262
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 204
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 205 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 175 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 224
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 225 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 262
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 204
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 205 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 204
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 205 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 204
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 205 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 204
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 205 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 147 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 196
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 197 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 204
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 205 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 96/238 (40%), Gaps = 44/238 (18%)
Query: 276 SERTIIFSLEEIEEAT----NNFDESRIIGRGGFGNV--YFGLLGDREAAIKKM-----R 324
S+R F EI ++T + + IG G G V + + +R AIKK+
Sbjct: 6 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 65
Query: 325 SNKSKEFFAELKVLCKIHHINV--FISTFG-NGSLSDHLHDPLLKGHQPLTWTARTQIAL 381
+K + EL ++ ++H N+ ++ F SL + ++ Q+ L
Sbjct: 66 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL 125
Query: 382 DAAK----------GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTN 431
D + GI+++H A +HRD+K SNI++ K+ DFGL RT
Sbjct: 126 DHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLA----RTA 178
Query: 432 EKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ V T Y PE I ++ D+++ G ++ E+I G
Sbjct: 179 GTSFMMVPFVVTRYYRAPEVILGMGYK-------------ENVDIWSVGCIMGEMIKG 223
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WTLCGTPE 204
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 205 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLXGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 147 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 196
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 197 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 23/144 (15%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLD--DGLRAKVADFGLVKLEERTNEKEMLATRLVGT 443
G+ Y H + HRD+K N LLD R K+ DFG K ++ + VGT
Sbjct: 128 GVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK----STVGT 180
Query: 444 PGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKM 503
P Y+ PE + + + + DV++ GV L ++ G D EP
Sbjct: 181 PAYIAPEVLLRQEYDGKI------------ADVWSCGVTLYVMLVGAYPF-EDPEEPRDY 227
Query: 504 KSLITIMAAVAEWCLNEDAVDRPE 527
+ I + +V ++ + +D PE
Sbjct: 228 RKTIQRILSV-KYSIPDDIRISPE 250
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 21/131 (16%)
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
+G++++H + VHRD+K NIL+ G K+ADFGL R +M +V T
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA----RIYSYQMALDPVVVTL 175
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMK 504
Y PE + + T D+++ G + AE+ ++ L +SE ++
Sbjct: 176 WYRAPEVLLQSTY-------------ATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLG 221
Query: 505 SLITIMAAVAE 515
+ ++ E
Sbjct: 222 KIFDLIGLPPE 232
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 96/246 (39%), Gaps = 57/246 (23%)
Query: 292 NNFDESRIIGRGGFGNVYFGLLGDREAAIKKMRSNKSKEFFAELK-VLCKIHHINVFIST 350
+N+ +IGRG +G VY + E + + N+ E + K +L +I +N S
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 351 FGNGSLSDHLHDPLLKGHQ------------------PLTWTAR--TQIALDAAKGIEYI 390
+ + D LLK + P+ T I + G +I
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFI 145
Query: 391 HDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-------------LEE-------RT 430
H+ + +HRD+K +N LL+ KV DFGL + LEE
Sbjct: 146 HE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNK 202
Query: 431 NEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
N K+ L + +V T Y PE I ++ T D+++ G + AEL+
Sbjct: 203 NLKKQLTSHVV-TRWYRAPELILLQE------------NYTKSIDIWSTGCIFAELLNML 249
Query: 491 RALIRD 496
++ I D
Sbjct: 250 QSHIND 255
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 149 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 198
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 199 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 236
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 33/124 (26%)
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGL----VKLEERTN--------- 431
K I+Y+H +HRD+K SNILL+ KVADFGL V + TN
Sbjct: 120 KVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINEN 176
Query: 432 -----EKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
+ + + T V T Y PE + + + T D+++ G +L E+
Sbjct: 177 TENFDDDQPILTDYVATRWYRAPEIL------------LGSTKYTKGIDMWSLGCILGEI 224
Query: 487 ITGK 490
+ GK
Sbjct: 225 LCGK 228
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 68/161 (42%), Gaps = 29/161 (18%)
Query: 391 HDHTKARYVHRDIKTSNILLDDGLR---AKVADFGLVKLEERTNEKEMLATRLVGTPGYL 447
H H++ VHRDIK NIL+D LR AK+ DFG L + TR+ Y
Sbjct: 154 HCHSRG-VVHRDIKDENILID--LRRGCAKLIDFGSGALLHDEPYTDFDGTRV-----YS 205
Query: 448 PPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD----DSEPTKM 503
PPE+I R H+ V++ G++L +++ G RD ++E
Sbjct: 206 PPEWI----SRHQYHA--------LPATVWSLGILLYDMVCGDIPFERDQEILEAELHFP 253
Query: 504 KSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQIMITSTE 544
+ A+ CL RP + +I +L M T E
Sbjct: 254 AHVSPDCCALIRRCLAPKPSSRPSLEEI--LLDPWMQTPAE 292
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 23/122 (18%)
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDDGL---RAKVADFGLVKLEERTNEKEMLATRLV 441
+G+ Y+H + VH D+K NILL K+ DFG+ + E ++
Sbjct: 142 EGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE----LREIM 194
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPT 501
GTP YL PE + +D +TT TD++ G++ L+T + +D++ T
Sbjct: 195 GTPEYLAPEIL-----NYD--------PITTATDMWNIGIIAYMLLTHTSPFVGEDNQET 241
Query: 502 KM 503
+
Sbjct: 242 YL 243
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 140 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WTLCGTPE 189
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 190 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 227
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 18/104 (17%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP- 444
G++Y+ + + +VHRD+ N+LL AK++DFGL K R +E A P
Sbjct: 123 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENXYKAQTHGKWPV 178
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ PE I +F ++K+DV++FGV++ E +
Sbjct: 179 KWYAPECINYYKF-------------SSKSDVWSFGVLMWEAFS 209
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 35/164 (21%)
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLV 441
+G+ + H++ + +HRD+K N+L++ + K+ DFGL + + T E++
Sbjct: 119 QGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV----- 170
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPT 501
T Y P+ + R +T D+++ G +LAE+ITGK L ++
Sbjct: 171 -TLWYRAPDVLMGSR------------TYSTSIDIWSCGCILAEMITGK-PLFPGTNDEE 216
Query: 502 KMKSLITIMAAVAE--WC-------LNEDAVDRPEMRDIVAILS 536
++K + IM E W N + RP RD+ +L
Sbjct: 217 QLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPP-RDLRQVLQ 259
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 23/137 (16%)
Query: 399 VHRDIKTSNILLDDGLRA---KVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVK 455
VHR++K N+LL L+ K+ADFGL +E ++ GTPGYL PE +
Sbjct: 132 VHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFG--FAGTPGYLSPEVL--- 185
Query: 456 RFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSLITIMAAVAE 515
R D + D++A GV+L L+ G +D + + I A +
Sbjct: 186 --RKDPYGK--------PVDLWACGVILYILLVGYPPFWDED----QHRLYQQIKAGAYD 231
Query: 516 WCLNEDAVDRPEMRDIV 532
+ E PE +D++
Sbjct: 232 FPSPEWDTVTPEAKDLI 248
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 21/131 (16%)
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
+G++++H + VHRD+K NIL+ G K+ADFGL R +M +V T
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA----RIYSYQMALFPVVVTL 175
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMK 504
Y PE + + T D+++ G + AE+ ++ L +SE ++
Sbjct: 176 WYRAPEVLLQSTY-------------ATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLG 221
Query: 505 SLITIMAAVAE 515
+ ++ E
Sbjct: 222 KIFDLIGLPPE 232
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 20/135 (14%)
Query: 354 GSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDG 413
GSL D L +GH L +R A+ A+G+ Y+ R++HRD+ N+LL
Sbjct: 95 GSLLDRLRKH--QGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATR 147
Query: 414 LRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTK 473
K+ DFGL++ + ++ ++ + PE + + F H+S
Sbjct: 148 DLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFS---HAS--------- 195
Query: 474 TDVFAFGVVLAELIT 488
D + FGV L E+ T
Sbjct: 196 -DTWMFGVTLWEMFT 209
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 19/106 (17%)
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVG 442
A+G+EY+ + +HRD+ N+L+ + K+ADFGL + + K+ RL
Sbjct: 167 ARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRL-- 221
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
++ PE +F + + T ++DV++FGV++ E+ T
Sbjct: 222 PVKWMAPEALFDRVY-------------THQSDVWSFGVLMWEIFT 254
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 20/135 (14%)
Query: 354 GSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDG 413
GSL D L +GH L +R A+ A+G+ Y+ R++HRD+ N+LL
Sbjct: 99 GSLLDRLRKH--QGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATR 151
Query: 414 LRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTK 473
K+ DFGL++ + ++ ++ + PE + + F H+S
Sbjct: 152 DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFS---HAS--------- 199
Query: 474 TDVFAFGVVLAELIT 488
D + FGV L E+ T
Sbjct: 200 -DTWMFGVTLWEMFT 213
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 19/106 (17%)
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVG 442
A+G+EY+ + +HRD+ N+L+ + K+ADFGL + + K+ RL
Sbjct: 167 ARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRL-- 221
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
++ PE +F + + T ++DV++FGV++ E+ T
Sbjct: 222 PVKWMAPEALFDRVY-------------THQSDVWSFGVLMWEIFT 254
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 20/135 (14%)
Query: 354 GSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDG 413
GSL D L +GH L +R A+ A+G+ Y+ R++HRD+ N+LL
Sbjct: 105 GSLLDRLRKH--QGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATR 157
Query: 414 LRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTK 473
K+ DFGL++ + ++ ++ + PE + + F H+S
Sbjct: 158 DLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFS---HAS--------- 205
Query: 474 TDVFAFGVVLAELIT 488
D + FGV L E+ T
Sbjct: 206 -DTWMFGVTLWEMFT 219
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+++D +V DFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 18/104 (17%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP- 444
G++Y+ + + +VHRD+ N+LL AK++DFGL K R +E A P
Sbjct: 117 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPV 172
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ PE I +F ++K+DV++FGV++ E +
Sbjct: 173 KWYAPECINYYKF-------------SSKSDVWSFGVLMWEAFS 203
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 18/104 (17%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP- 444
G++Y+ + + +VHRD+ N+LL AK++DFGL K R +E A P
Sbjct: 119 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPV 174
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ PE I +F ++K+DV++FGV++ E +
Sbjct: 175 KWYAPECINYYKF-------------SSKSDVWSFGVLMWEAFS 205
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 20/135 (14%)
Query: 354 GSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDG 413
GSL D L +GH L +R A+ A+G+ Y+ R++HRD+ N+LL
Sbjct: 99 GSLLDRLRKH--QGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATR 151
Query: 414 LRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTK 473
K+ DFGL++ + ++ ++ + PE + + F H+S
Sbjct: 152 DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFS---HAS--------- 199
Query: 474 TDVFAFGVVLAELIT 488
D + FGV L E+ T
Sbjct: 200 -DTWMFGVTLWEMFT 213
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 22/138 (15%)
Query: 399 VHRDIKTSNILLD-DGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRF 457
+HRDIK NIL+D + K+ DFG L K+ + T GT Y PPE+I R+
Sbjct: 179 LHRDIKDENILIDLNRGELKLIDFGSGAL-----LKDTVYTDFDGTRVYSPPEWIRYHRY 233
Query: 458 RFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDD----SEPTKMKSLITIMAAV 513
V++ G++L +++ G D+ + + + + +
Sbjct: 234 H------------GRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 281
Query: 514 AEWCLNEDAVDRPEMRDI 531
WCL DRP +I
Sbjct: 282 IRWCLALRPSDRPTFEEI 299
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 18/104 (17%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP- 444
G++Y+ + + +VHRD+ N+LL AK++DFGL K R +E A P
Sbjct: 123 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPV 178
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ PE I +F ++K+DV++FGV++ E +
Sbjct: 179 KWYAPECINYYKF-------------SSKSDVWSFGVLMWEAFS 209
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 18/80 (22%)
Query: 380 ALDAAK----GIEYIHDHTKARYVHRDIKTSNILL-----DDGLRAKVADFGLVKLEERT 430
A DA K + Y+H++ VHRD+K N+L D L K+ADFGL K+ E
Sbjct: 150 AADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPL--KIADFGLSKIVEH- 203
Query: 431 NEKEMLATRLVGTPGYLPPE 450
++L + GTPGY PE
Sbjct: 204 ---QVLMKTVCGTPGYCAPE 220
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 18/104 (17%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP- 444
G++Y+ + + +VHRD+ N+LL AK++DFGL K R +E A P
Sbjct: 137 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPV 192
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ PE I +F ++K+DV++FGV++ E +
Sbjct: 193 KWYAPECINYYKF-------------SSKSDVWSFGVLMWEAFS 223
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 20/135 (14%)
Query: 354 GSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDG 413
GSL D L +GH L +R A+ A+G+ Y+ R++HRD+ N+LL
Sbjct: 105 GSLLDRLRKH--QGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATR 157
Query: 414 LRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTK 473
K+ DFGL++ + ++ ++ + PE + + F H+S
Sbjct: 158 DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFS---HAS--------- 205
Query: 474 TDVFAFGVVLAELIT 488
D + FGV L E+ T
Sbjct: 206 -DTWMFGVTLWEMFT 219
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 20/135 (14%)
Query: 354 GSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDG 413
GSL D L +GH L +R A+ A+G+ Y+ R++HRD+ N+LL
Sbjct: 95 GSLLDRLRKH--QGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATR 147
Query: 414 LRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTK 473
K+ DFGL++ + ++ ++ + PE + + F H+S
Sbjct: 148 DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFS---HAS--------- 195
Query: 474 TDVFAFGVVLAELIT 488
D + FGV L E+ T
Sbjct: 196 -DTWMFGVTLWEMFT 209
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 20/135 (14%)
Query: 354 GSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDG 413
GSL D L +GH L +R A+ A+G+ Y+ R++HRD+ N+LL
Sbjct: 95 GSLLDRLRKH--QGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATR 147
Query: 414 LRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTK 473
K+ DFGL++ + ++ ++ + PE + + F H+S
Sbjct: 148 DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFS---HAS--------- 195
Query: 474 TDVFAFGVVLAELIT 488
D + FGV L E+ T
Sbjct: 196 -DTWMFGVTLWEMFT 209
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 18/104 (17%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP- 444
G++Y+ + + +VHRD+ N+LL AK++DFGL K R +E A P
Sbjct: 129 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPV 184
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ PE I +F ++K+DV++FGV++ E +
Sbjct: 185 KWYAPECINYYKF-------------SSKSDVWSFGVLMWEAFS 215
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 108/235 (45%), Gaps = 49/235 (20%)
Query: 292 NNFDESRIIGRGGFGNVY-------------FGLLGDREAAIK---KMRSNKSKEFFAEL 335
++F+ +++G+G FG V+ + + ++A +K ++R+ ++ A++
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV 87
Query: 336 K--VLCKIHH-------INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKG 386
+ K+H+ + + + G L L ++ + + + ++AL G
Sbjct: 88 NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL-AELAL----G 142
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
++++H ++RD+K NILLD+ K+ DFGL K E +EK+ A GT Y
Sbjct: 143 LDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK-EAIDHEKK--AYSFCGTVEY 196
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPT 501
+ PE + + HS+ D +++GV++ E++TG D + T
Sbjct: 197 MAPEVV---NRQGHSHSA----------DWWSYGVLMFEMLTGSLPFQGKDRKET 238
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 97/239 (40%), Gaps = 44/239 (18%)
Query: 276 SERTIIFSLEEIEEAT----NNFDESRIIGRGGFGNV--YFGLLGDREAAIKKM-----R 324
S+R F EI ++T + + IG G G V + + +R AIKK+
Sbjct: 9 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 68
Query: 325 SNKSKEFFAELKVLCKIHHINV--FISTFG-NGSLSDHLHDPLLKGHQPLTWTARTQIAL 381
+K + EL ++ ++H N+ ++ F SL + ++ Q+ L
Sbjct: 69 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL 128
Query: 382 DAAK----------GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTN 431
D + GI+++H A +HRD+K SNI++ K+ DFGL RT
Sbjct: 129 DHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLA----RTA 181
Query: 432 EKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
+ T V T Y PE I ++ D+++ G ++ E++ K
Sbjct: 182 GTSFMMTPYVVTRYYRAPEVILGMGYK-------------ENVDLWSVGCIMGEMVCHK 227
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 18/104 (17%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP- 444
G++Y+ + + +VHRD+ N+LL AK++DFGL K R +E A P
Sbjct: 482 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPV 537
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ PE I +F ++K+DV++FGV++ E +
Sbjct: 538 KWYAPECINYYKF-------------SSKSDVWSFGVLMWEAFS 568
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 18/104 (17%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP- 444
G++Y+ + + +VHRD+ N+LL AK++DFGL K R +E A P
Sbjct: 481 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPV 536
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ PE I +F ++K+DV++FGV++ E +
Sbjct: 537 KWYAPECINYYKF-------------SSKSDVWSFGVLMWEAFS 567
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 18/104 (17%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP- 444
G++Y+ + + +VHRD+ N+LL AK++DFGL K R +E A P
Sbjct: 139 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPV 194
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ PE I +F ++K+DV++FGV++ E +
Sbjct: 195 KWYAPECINYYKF-------------SSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 18/104 (17%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP- 444
G++Y+ + + +VHRD+ N+LL AK++DFGL K R +E A P
Sbjct: 139 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPV 194
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+ PE I +F ++K+DV++FGV++ E +
Sbjct: 195 KWYAPECINYYKF-------------SSKSDVWSFGVLMWEAFS 225
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 20/107 (18%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILL---DDGLRAKVADFGLVKLEERTNEKEMLATRLVG 442
++Y+H++ +HRD+K N+LL ++ K+ DFG K+ T+ L L G
Sbjct: 132 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCG 184
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
TP YL PE + SV D ++ GV+L ++G
Sbjct: 185 TPTYLAPEVLV----------SVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 20/107 (18%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILL---DDGLRAKVADFGLVKLEERTNEKEMLATRLVG 442
++Y+H++ +HRD+K N+LL ++ K+ DFG K+ T+ L L G
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCG 178
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
TP YL PE + SV D ++ GV+L ++G
Sbjct: 179 TPTYLAPEVLV----------SVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 20/107 (18%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILL---DDGLRAKVADFGLVKLEERTNEKEMLATRLVG 442
++Y+H++ +HRD+K N+LL ++ K+ DFG K+ T+ L L G
Sbjct: 125 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCG 177
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
TP YL PE + SV D ++ GV+L ++G
Sbjct: 178 TPTYLAPEVLV----------SVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 20/107 (18%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILL---DDGLRAKVADFGLVKLEERTNEKEMLATRLVG 442
++Y+H++ +HRD+K N+LL ++ K+ DFG K+ T+ L L G
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCG 178
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
TP YL PE + SV D ++ GV+L ++G
Sbjct: 179 TPTYLAPEVLV----------SVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 20/103 (19%)
Query: 399 VHRDIKTSNILLDD---GLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVK 455
VHR++K N+LL G K+ADFGL N+ E GTPGYL PE +
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHG-FAGTPGYLSPEVL--- 179
Query: 456 RFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDS 498
+ D +S + D++A GV+L L+ G +D
Sbjct: 180 --KKDPYSKPV--------DIWACGVILYILLVGYPPFWDEDQ 212
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 20/107 (18%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILL---DDGLRAKVADFGLVKLEERTNEKEMLATRLVG 442
++Y+H++ +HRD+K N+LL ++ K+ DFG K+ T+ L L G
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCG 178
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
TP YL PE + SV D ++ GV+L ++G
Sbjct: 179 TPTYLAPEVLV----------SVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 63/121 (52%), Gaps = 4/121 (3%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
+E +H + VH D+K +N L+ DG+ K+ DFG+ + + + ++ VG Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIAN-QMQPDTTSVVKDSQVGAVNY 222
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSL 506
+PPE I K + + +++ K+DV++ G +L + GK + ++ +K+ ++
Sbjct: 223 MPPEAI--KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 280
Query: 507 I 507
I
Sbjct: 281 I 281
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ ++ G D
Sbjct: 204 YLAPEIILSKGY-------------NKAVDWWALGVLIYQMAAGYPPFFAD 241
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 23/108 (21%)
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDD---GLRAKVADFGLVKLEERTNEKEMLATRLV 441
+ I Y H + VHR++K N+LL G K+ADFGL N+ E
Sbjct: 139 ESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHG-FA 191
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
GTPGYL PE + + D +S + D++A GV+L L+ G
Sbjct: 192 GTPGYLSPEVL-----KKDPYSKPV--------DIWACGVILYILLVG 226
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 20/94 (21%)
Query: 399 VHRDIKTSNILLDD---GLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVK 455
VHR++K N+LL G K+ADFGL N+ E GTPGYL PE +
Sbjct: 126 VHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHG-FAGTPGYLSPEVL--- 178
Query: 456 RFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ D +S + D++A GV+L L+ G
Sbjct: 179 --KKDPYSKPV--------DIWACGVILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 20/94 (21%)
Query: 399 VHRDIKTSNILLDD---GLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVK 455
VHR++K N+LL G K+ADFGL N+ E GTPGYL PE +
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHG-FAGTPGYLSPEVL--- 179
Query: 456 RFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ D +S + D++A GV+L L+ G
Sbjct: 180 --KKDPYSKPV--------DIWACGVILYILLVG 203
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 20/107 (18%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILL---DDGLRAKVADFGLVKLEERTNEKEMLATRLVG 442
++Y+H++ +HRD+K N+LL ++ K+ DFG K+ T+ L L G
Sbjct: 265 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCG 317
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
TP YL PE + SV D ++ GV+L ++G
Sbjct: 318 TPTYLAPEVLV----------SVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+++D +V DFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL PE I K + D +A GV++ E+ G D
Sbjct: 204 YLAPEIIISKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 22/113 (19%)
Query: 379 IALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNE--KEML 436
I + + + H H +HRD+K NIL+ K+ DFG +L ++ + +
Sbjct: 107 ITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV 163
Query: 437 ATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
ATR +P L V + Q DV+A G V AEL++G
Sbjct: 164 ATRWYRSPELL-----------------VGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 86/211 (40%), Gaps = 40/211 (18%)
Query: 300 IGRGGFGNV--YFGLLGDREAAIKKM-----RSNKSKEFFAELKVLCKIHHINV--FIST 350
IG G G V + + +R AIKK+ +K + EL ++ ++H N+ ++
Sbjct: 26 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 85
Query: 351 FG-NGSLSDHLHDPLLKGHQPLTWTARTQIALDAAK----------GIEYIHDHTKARYV 399
F SL + ++ Q+ LD + GI+++H A +
Sbjct: 86 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGII 142
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K SNI++ K+ DFGL RT + T V T Y PE I ++
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILGMGYK- 197
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
D+++ G ++ E++ K
Sbjct: 198 ------------ENVDLWSVGCIMGEMVCHK 216
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 19/106 (17%)
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVG 442
A+G+EY+ + +HRD+ N+L+ + K+ADFGL + + K+ RL
Sbjct: 156 ARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-- 210
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
++ PE +F + + T ++DV++FGV++ E+ T
Sbjct: 211 PVKWMAPEALFDRVY-------------THQSDVWSFGVLMWEIFT 243
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 19/106 (17%)
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVG 442
A+G+EY+ + +HRD+ N+L+ + K+ADFGL + + K+ RL
Sbjct: 159 ARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-- 213
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
++ PE +F + + T ++DV++FGV++ E+ T
Sbjct: 214 PVKWMAPEALFDRVY-------------THQSDVWSFGVLMWEIFT 246
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 20/107 (18%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILL---DDGLRAKVADFGLVKLEERTNEKEMLATRLVG 442
++Y+H++ +HRD+K N+LL ++ K+ DFG K+ T+ L L G
Sbjct: 251 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCG 303
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
TP YL PE + SV D ++ GV+L ++G
Sbjct: 304 TPTYLAPEVLV----------SVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 19/106 (17%)
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVG 442
A+G+EY+ + +HRD+ N+L+ + K+ADFGL + + K+ RL
Sbjct: 167 ARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-- 221
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
++ PE +F + + T ++DV++FGV++ E+ T
Sbjct: 222 PVKWMAPEALFDRVY-------------THQSDVWSFGVLMWEIFT 254
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 19/106 (17%)
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVG 442
A+G+EY+ + +HRD+ N+L+ + K+ADFGL + + K+ RL
Sbjct: 167 ARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-- 221
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
++ PE +F + + T ++DV++FGV++ E+ T
Sbjct: 222 PVKWMAPEALFDRVY-------------THQSDVWSFGVLMWEIFT 254
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 19/106 (17%)
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVG 442
A+G+EY+ + +HRD+ N+L+ + K+ADFGL + + K+ RL
Sbjct: 154 ARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-- 208
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
++ PE +F + + T ++DV++FGV++ E+ T
Sbjct: 209 PVKWMAPEALFDRVY-------------THQSDVWSFGVLMWEIFT 241
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 19/106 (17%)
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVG 442
A+G+EY+ + +HRD+ N+L+ + K+ADFGL + + K+ RL
Sbjct: 167 ARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-- 221
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
++ PE +F + + T ++DV++FGV++ E+ T
Sbjct: 222 PVKWMAPEALFDRVY-------------THQSDVWSFGVLMWEIFT 254
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 22/110 (20%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGY 446
EY+H ++RD+K N+L+D +V DFG K + L GTP Y
Sbjct: 175 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA------TWTLCGTPEY 225
Query: 447 LPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
L PE I K + D +A GV++ E+ G D
Sbjct: 226 LAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 262
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 19/106 (17%)
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVG 442
A+G+EY+ + +HRD+ N+L+ + K+ADFGL + + K+ RL
Sbjct: 167 ARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-- 221
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
++ PE +F + + T ++DV++FGV++ E+ T
Sbjct: 222 PVKWMAPEALFDRVY-------------THQSDVWSFGVLMWEIFT 254
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 90/226 (39%), Gaps = 51/226 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFG--LLGDREAAIKKMRSNKSKEFFAELKVLCKIHHI----- 344
N F R IG G FG +Y G + + E AI K+ + K+K +L KI+ I
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAI-KLENVKTKH--PQLLYESKIYRILQGGT 63
Query: 345 --------------NVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYI 390
NV + SL D + K L+ +A +E++
Sbjct: 64 GIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRK----LSLKTVLMLADQMINRVEFV 119
Query: 391 HDHTKARYVHRDIKTSNILLDDGLRAK---VADFGLVKLEERTNEKEMLATR----LVGT 443
H + ++HRDIK N L+ G RA + DFGL K T+ + + R L GT
Sbjct: 120 HSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGT 176
Query: 444 PGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
R+ ++ + ++ + + D+ + G VL + G
Sbjct: 177 A-------------RYASVNTHLGIEQSRRDDLESLGYVLMYFLRG 209
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 24/134 (17%)
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLV 441
KG+ + H +HRD+K N+L++ K+A+FGL + + R E++
Sbjct: 112 KGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV----- 163
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPT 501
T Y PP+ +F + +T D+++ G + AEL R L +
Sbjct: 164 -TLWYRPPDVLFGAKL------------YSTSIDMWSAGCIFAELANAGRPLFPGNDVDD 210
Query: 502 KMKSLITIMAAVAE 515
++K + ++ E
Sbjct: 211 QLKRIFRLLGTPTE 224
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 19/106 (17%)
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVG 442
A+G+EY+ + +HRD+ N+L+ + K+ADFGL + + K+ RL
Sbjct: 167 ARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-- 221
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
++ PE +F + + T ++DV++FGV++ E+ T
Sbjct: 222 PVKWMAPEALFDRVY-------------THQSDVWSFGVLMWEIFT 254
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 97/252 (38%), Gaps = 60/252 (23%)
Query: 289 EATNNFDESRIIGRGGFGNVY--FGLLGDREAAIKKMRSN-----KSKEFFAELKVL--- 338
+ +N++ +IGRG +G VY + ++ AIKK+ K E+ +L
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 339 -----CKIHHINV------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGI 387
++H + + F + ++D L K LT I + G
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGE 144
Query: 388 EYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKL--------------------- 426
++IH+ + +HRD+K +N LL+ K+ DFGL +
Sbjct: 145 KFIHE---SGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEE 201
Query: 427 --EERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLA 484
N K+ L + +V T Y PE I ++ T D+++ G + A
Sbjct: 202 PGPHNKNLKKQLTSHVV-TRWYRAPELILLQE------------NYTNSIDIWSTGCIFA 248
Query: 485 ELITGKRALIRD 496
EL+ ++ I +
Sbjct: 249 ELLNMMKSHINN 260
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 22/108 (20%)
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILL---DDGLRAKVADFGLVKLEERTNEKEMLATRLV 441
+ + Y HD+ +HRD+K N+LL ++ K+ DFG+ + E ++A V
Sbjct: 141 EALRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAI---QLGESGLVAGGRV 194
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
GTP ++ PE VKR + DV+ GV+L L++G
Sbjct: 195 GTPHFMAPE--VVKREPY-----------GKPVDVWGCGVILFILLSG 229
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 19/106 (17%)
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVG 442
A+G+EY+ + +HRD+ N+L+ + K+ADFGL + + K+ RL
Sbjct: 213 ARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-- 267
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
++ PE +F + + T ++DV++FGV++ E+ T
Sbjct: 268 PVKWMAPEALFDRVY-------------THQSDVWSFGVLMWEIFT 300
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 85/217 (39%), Gaps = 54/217 (24%)
Query: 320 IKKMRSNKSK------EFFAELKVLCKIHHINVF---------------ISTFGNGSLSD 358
IKK R + S+ E E+ +L +I H N+ + G L D
Sbjct: 45 IKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFD 104
Query: 359 HLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDD----GL 414
L + + LT TQ G+ Y+H R H D+K NI+L D
Sbjct: 105 FLAEK-----ESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNP 156
Query: 415 RAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKT 474
R K+ DFG+ E NE + GTP ++ PE + + + +
Sbjct: 157 RIKLIDFGIAHKIEAGNE----FKNIFGTPEFVAPEIVNYE-------------PLGLEA 199
Query: 475 DVFAFGVVLAELITGKRALIRDDSEPTKMKSLITIMA 511
D+++ GV+ L++G + + TK ++L I A
Sbjct: 200 DMWSIGVITYILLSGASPFLGE----TKQETLTNISA 232
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 19/106 (17%)
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVG 442
A+G+EY+ + +HRD+ N+L+ + K+ADFGL + + K RL
Sbjct: 167 ARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRL-- 221
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
++ PE +F + + T ++DV++FGV++ E+ T
Sbjct: 222 PVKWMAPEALFDRVY-------------THQSDVWSFGVLMWEIFT 254
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 24/109 (22%)
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK---LEERTNEKEMLATRLV 441
+G+ Y H + + +HRD+K N+L+++ K+ADFGL + + +T + E V
Sbjct: 111 RGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNE------V 161
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
T Y PP+ + + +T+ D++ G + E+ TG+
Sbjct: 162 VTLWYRPPDIL------------LGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 85/217 (39%), Gaps = 54/217 (24%)
Query: 320 IKKMRSNKSK------EFFAELKVLCKIHHINVF---------------ISTFGNGSLSD 358
IKK R + S+ E E+ +L +I H N+ + G L D
Sbjct: 38 IKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFD 97
Query: 359 HLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDD----GL 414
L + + LT TQ G+ Y+H R H D+K NI+L D
Sbjct: 98 FLAEK-----ESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNP 149
Query: 415 RAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKT 474
R K+ DFG+ E NE + GTP ++ PE + + + +
Sbjct: 150 RIKLIDFGIAHKIEAGNE----FKNIFGTPEFVAPEIVNYE-------------PLGLEA 192
Query: 475 DVFAFGVVLAELITGKRALIRDDSEPTKMKSLITIMA 511
D+++ GV+ L++G + + TK ++L I A
Sbjct: 193 DMWSIGVITYILLSGASPFLGE----TKQETLTNISA 225
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 19/110 (17%)
Query: 380 ALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATR 439
+ AKG+E++ + +HRD+ NILL + K+ DFGL + + + + +
Sbjct: 199 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVRKG 253
Query: 440 LVGTP-GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P ++ PE IF + + T ++DV++FGV+L E+ +
Sbjct: 254 DARLPLKWMAPETIFDRVY-------------TIQSDVWSFGVLLWEIFS 290
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 19/110 (17%)
Query: 380 ALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATR 439
+ AKG+E++ + +HRD+ NILL + K+ DFGL + + + + +
Sbjct: 204 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVRKG 258
Query: 440 LVGTP-GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P ++ PE IF + + T ++DV++FGV+L E+ +
Sbjct: 259 DARLPLKWMAPETIFDRVY-------------TIQSDVWSFGVLLWEIFS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 19/110 (17%)
Query: 380 ALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATR 439
+ AKG+E++ + +HRD+ NILL + K+ DFGL + + + + +
Sbjct: 206 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVRKG 260
Query: 440 LVGTP-GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P ++ PE IF + + T ++DV++FGV+L E+ +
Sbjct: 261 DARLPLKWMAPETIFDRVY-------------TIQSDVWSFGVLLWEIFS 297
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 19/110 (17%)
Query: 380 ALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATR 439
+ AKG+E++ + +HRD+ NILL + K+ DFGL + + + + +
Sbjct: 197 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVRKG 251
Query: 440 LVGTP-GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
P ++ PE IF + + T ++DV++FGV+L E+ +
Sbjct: 252 DARLPLKWMAPETIFDRVY-------------TIQSDVWSFGVLLWEIFS 288
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 106/269 (39%), Gaps = 57/269 (21%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYFGL----LGDREA-AIKKM-RSNKSKEFFAELKVL 338
E + + +N F IG G F +VY +G E A+K + ++ AEL+ L
Sbjct: 14 EAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCL 73
Query: 339 CKIHHINVFISTFGNGSLSDHL--------HDPLLKGHQPLTWTARTQIALDAAKGIEYI 390
+ + +DH+ H+ L L++ + L+ K ++ I
Sbjct: 74 TVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRI 133
Query: 391 HDHTKARYVHRDIKTSNILLDDGLRA-KVADFGLVK-----------------LEERTNE 432
H VHRD+K SN L + L+ + DFGL + +ER ++
Sbjct: 134 HQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQ 190
Query: 433 ---------KEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVL 483
++ +A R GTPG+ PE + TT D+++ GV+
Sbjct: 191 NKCSICLSRRQQVAPR-AGTPGFRAPEVL------------TKCPNQTTAIDMWSAGVIF 237
Query: 484 AELITGKRALIRDDSEPTKMKSLITIMAA 512
L++G+ + + T + ++TI +
Sbjct: 238 LSLLSGRYPFYKASDDLTALAQIMTIRGS 266
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 93/225 (41%), Gaps = 37/225 (16%)
Query: 283 SLEEIEEATNNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMR----SNKSKEFFAELK 336
+ E E ++ + +GRG +G V + + A+K++R S + K +L
Sbjct: 25 AXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLD 84
Query: 337 VLCKIHHINVFISTFG---------------NGSLSDHLHDPLLKGHQPLTWTARTQIAL 381
+ + ++ +G + SL D + ++ Q + +IA+
Sbjct: 85 ISXRTVDCPFTVTFYGALFREGDVWICXELXDTSL-DKFYKQVIDKGQTIPEDILGKIAV 143
Query: 382 DAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLV 441
K +E H H+K +HRD+K SN+L++ + K DFG+ K++ A
Sbjct: 144 SIVKALE--HLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA---- 197
Query: 442 GTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
G Y PE I + + + + K+D+++ G+ EL
Sbjct: 198 GCKPYXAPERI---------NPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 98/239 (41%), Gaps = 44/239 (18%)
Query: 276 SERTIIFSLEEIEEAT----NNFDESRIIGRGGFGNV--YFGLLGDREAAIKKM-----R 324
S+R F EI ++T + + IG G G V + + +R AIKK+
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 63
Query: 325 SNKSKEFFAELKVLCKIHHINV--FISTFG-NGSLSDHLHDPLLKGHQPLTWTARTQIAL 381
+K + EL ++ ++H N+ ++ F SL + ++ Q+ L
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL 123
Query: 382 DAAK----------GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTN 431
D + GI+++H A +HRD+K SNI++ K+ DFGL
Sbjct: 124 DHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL-------- 172
Query: 432 EKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
R GT + PE V R+ + ++ + D+++ G ++ E++ K
Sbjct: 173 ------ARTAGTSFMMEPE--VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 19/119 (15%)
Query: 371 LTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEER 429
LT+ A AKG+E++ + VHRD+ N+L+ G K+ DFGL + +
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFKSC---VHRDLAARNVLVTHGKVVKICDFGLARDIMSD 225
Query: 430 TNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+N RL ++ PE S+ E T K+DV+++G++L E+ +
Sbjct: 226 SNYVVRGNARL--PVKWMAPE-------------SLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 84/217 (38%), Gaps = 54/217 (24%)
Query: 320 IKKMRSNKSK------EFFAELKVLCKIHHINVF---------------ISTFGNGSLSD 358
IKK R S+ E E+ +L +I H N+ + G L D
Sbjct: 59 IKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFD 118
Query: 359 HLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDD----GL 414
L + + LT TQ G+ Y+H R H D+K NI+L D
Sbjct: 119 FLAEK-----ESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNP 170
Query: 415 RAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKT 474
R K+ DFG+ E NE + GTP ++ PE + + + +
Sbjct: 171 RIKLIDFGIAHKIEAGNE----FKNIFGTPEFVAPEIVNYE-------------PLGLEA 213
Query: 475 DVFAFGVVLAELITGKRALIRDDSEPTKMKSLITIMA 511
D+++ GV+ L++G + + TK ++L I A
Sbjct: 214 DMWSIGVITYILLSGASPFLGE----TKQETLTNISA 246
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 91/213 (42%), Gaps = 46/213 (21%)
Query: 300 IGRGGFGNVYFGLLGDR----EAAIKKMRSNKSK----EFFAELKVL------------- 338
+G G FG+V G+ R + AIK ++ K E E +++
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 339 -CKIHHINVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKAR 397
C+ + + + G G L H L+ + + + ++ + G++Y+ +
Sbjct: 404 VCQAEALMLVMEMAGGGPL----HKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN--- 456
Query: 398 YVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGT-P-GYLPPEYIFVK 455
+VHR++ N+LL + AK++DFGL K + R G P + PE I +
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSK--ALGADDSYYTARSAGKWPLKWYAPECINFR 514
Query: 456 RFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
+F ++++DV+++GV + E ++
Sbjct: 515 KF-------------SSRSDVWSYGVTMWEALS 534
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
YL P I K + D +A GV++ E+ G D
Sbjct: 204 YLAPAIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 19/106 (17%)
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVG 442
A+G+EY+ + +HRD+ N+L+ + ++ADFGL + + K+ RL
Sbjct: 167 ARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRL-- 221
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
++ PE +F + + T ++DV++FGV++ E+ T
Sbjct: 222 PVKWMAPEALFDRVY-------------THQSDVWSFGVLMWEIFT 254
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 98/239 (41%), Gaps = 44/239 (18%)
Query: 276 SERTIIFSLEEIEEAT----NNFDESRIIGRGGFGNV--YFGLLGDREAAIKKM-----R 324
S+R F EI ++T + + IG G G V + + +R AIKK+
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 63
Query: 325 SNKSKEFFAELKVLCKIHHINV--FISTFG-NGSLSDHLHDPLLKGHQPLTWTARTQIAL 381
+K + EL ++ ++H N+ ++ F SL + ++ Q+ L
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL 123
Query: 382 DAAK----------GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTN 431
D + GI+++H A +HRD+K SNI++ K+ DFGL
Sbjct: 124 DHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL-------- 172
Query: 432 EKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
R GT + PE V R+ + ++ + D+++ G ++ E++ K
Sbjct: 173 ------ARTAGTSFMMEPE--VVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 102/269 (37%), Gaps = 59/269 (21%)
Query: 285 EEIEEATNNFDESRIIGRGGFGNVYFGLLGDR--EAAIKKMRS-----NKSKEFFAELKV 337
E + + F R+ G+G FG V G AIKK+ N+ + +L V
Sbjct: 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAV 75
Query: 338 LCKIHHINV-----FISTFGNGSLSD--------HLHDPLLKGHQPLTWTARTQIA---- 380
L HH N+ + T G D ++ D L H+ R Q+A
Sbjct: 76 L---HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTL---HRCCRNYYRRQVAPPPI 129
Query: 381 ------LDAAKGIEYIHDHTKARYVHRDIKTSNILLD--DGLRAKVADFGLVK-LEERTN 431
+ I +H HRDIK N+L++ DG K+ DFG K L
Sbjct: 130 LIKVFLFQLIRSIGCLH-LPSVNVCHRDIKPHNVLVNEADGT-LKLCDFGSAKKLSPSEP 187
Query: 432 EKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKR 491
+ +R Y PE IF + TT D+++ G + AE++ G+
Sbjct: 188 NVAYICSRY-----YRAPELIFGNQ------------HYTTAVDIWSVGCIFAEMMLGE- 229
Query: 492 ALIRDDSEPTKMKSLITIMAAVAEWCLNE 520
+ R D+ ++ ++ ++ + L +
Sbjct: 230 PIFRGDNSAGQLHEIVRVLGCPSREVLRK 258
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 23/150 (15%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLD--DGLRAKVADFGLVKLEERTNEKEMLATRLVGT 443
G+ Y H + HRD+K N LLD R K+ FG K ++ + VGT
Sbjct: 127 GVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPK----STVGT 179
Query: 444 PGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKM 503
P Y+ PE + K + + DV++ GV L ++ G D EP
Sbjct: 180 PAYIAPEVLLKKEYDGKV------------ADVWSCGVTLYVMLVGAYPF-EDPEEPKNF 226
Query: 504 KSLITIMAAVAEWCLNEDAVDRPEMRDIVA 533
+ I + V ++ + + PE R +++
Sbjct: 227 RKTIHRILNV-QYAIPDYVHISPECRHLIS 255
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 106/273 (38%), Gaps = 58/273 (21%)
Query: 293 NFDESRIIGRGGFGNVYFGLLGDREAAIKKMRSNKSKEFFAELKVLCK---IHHINVFIS 349
NF+ +++G G +G V+ ++K+ + + + +A +KVL K +
Sbjct: 55 NFELLKVLGTGAYGKVFL---------VRKISGHDTGKLYA-MKVLKKATIVQKAKTTEH 104
Query: 350 TFGNGSLSDHLHDP--LLKGHQPLTWTARTQIALDAAKGIE-YIHDHTKARY-------- 398
T + +H+ L+ H + + LD G E + H + R+
Sbjct: 105 TRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIY 164
Query: 399 ----------------VHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVG 442
++RDIK NILLD + DFGL K E ++ A G
Sbjct: 165 VGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSK--EFVADETERAYDFCG 222
Query: 443 TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTK 502
T Y+ P+ + R H + D ++ GV++ EL+TG D + ++
Sbjct: 223 TIEYMAPDIV---RGGDSGHDKAV--------DWWSLGVLMYELLTGASPFTVDGEKNSQ 271
Query: 503 MKSLITIMAAVAEW-----CLNEDAVDRPEMRD 530
+ I+ + + L +D + R M+D
Sbjct: 272 AEISRRILKSEPPYPQEMSALAKDLIQRLLMKD 304
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 23/150 (15%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLD--DGLRAKVADFGLVKLEERTNEKEMLATRLVGT 443
G+ Y H + HRD+K N LLD R K+ FG K ++ + VGT
Sbjct: 127 GVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPK----DTVGT 179
Query: 444 PGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKM 503
P Y+ PE + K + + DV++ GV L ++ G D EP
Sbjct: 180 PAYIAPEVLLKKEYDGKV------------ADVWSCGVTLYVMLVGAYPF-EDPEEPKNF 226
Query: 504 KSLITIMAAVAEWCLNEDAVDRPEMRDIVA 533
+ I + V ++ + + PE R +++
Sbjct: 227 RKTIHRILNV-QYAIPDYVHISPECRHLIS 255
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 84/211 (39%), Gaps = 42/211 (19%)
Query: 321 KKMRSNKSKEFFAELKVLCKIHHINVFISTFGNGSLSDHLHDPLLKG---------HQPL 371
K+M +N KE A LK LC+ H V + + L L LL G +
Sbjct: 46 KRMEANTQKEITA-LK-LCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHF 103
Query: 372 TWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILL---DDGLRAKVADFGLVKLEE 428
+ T + I + ++HD VHRD+K N+L +D L K+ DFG +L+
Sbjct: 104 SETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLK- 159
Query: 429 RTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMEL----QVTTKTDVFAFGVVLA 484
PP+ +K F +H + EL D+++ GV+L
Sbjct: 160 -------------------PPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILY 200
Query: 485 ELITGKRALIRDDSEPTKMKSLITIMAAVAE 515
+++G+ D T S + IM + +
Sbjct: 201 TMLSGQVPFQSHDRSLT-CTSAVEIMKKIKK 230
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 24/111 (21%)
Query: 387 IEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVK-LEERTNEKEMLATRLVGTPG 445
EY+H ++RD+K N+L+D +V DFG K ++ RT L GTP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPE 203
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRD 496
L PE I K + D +A GV++ E+ G D
Sbjct: 204 ALAPEIILSKGY-------------NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 21/97 (21%)
Query: 399 VHRDIKTSNILLDDGLRAKVADFGLVKL--------EERTNEKEMLATRLVGTPGYLPPE 450
+HRD+K SN+L++ KV DFGL ++ E T ++ + T V T Y PE
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM-TEYVATRWYRAPE 192
Query: 451 YIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELI 487
+ + + DV++ G +LAEL
Sbjct: 193 VMLT------------SAKYSRAMDVWSCGCILAELF 217
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 21/96 (21%)
Query: 399 VHRDIKTSNILLDDGLRAKVADFGLVKL--------EERTNEKEMLATRLVGTPGYLPPE 450
+HRD+K SN+L++ KV DFGL ++ E T ++ + T V T Y PE
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM-TEXVATRWYRAPE 192
Query: 451 YIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
+ + + DV++ G +LAEL
Sbjct: 193 VMLT------------SAKYSRAMDVWSCGCILAEL 216
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 40/90 (44%), Gaps = 15/90 (16%)
Query: 400 HRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRF 459
HRD+K NIL+ A + DFG+ T+EK VGT Y PE RF
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASAT--TDEKLTQLGNTVGTLYYXAPE-------RF 207
Query: 460 DMHSSVMELQVTTKTDVFAFGVVLAELITG 489
E T + D++A VL E +TG
Sbjct: 208 S------ESHATYRADIYALTCVLYECLTG 231
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 94/242 (38%), Gaps = 60/242 (24%)
Query: 292 NNFDESRIIGRGGFGNV--YFGLLGDREAAIKKMRSN-----KSKEFFAELKVLCKIHHI 344
+ ++ +IG G +G+V + L R AIKK+ K E+ +L +++H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 345 NV--------------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYI 390
+V F + ++D L + LT + + G++Y+
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYV 172
Query: 391 HDHTKARYVHRDIKTSNILLDDGLRAKVADFGL---VKLEERTN--------EKEM---- 435
H A +HRD+K +N L++ KV DFGL V E N E +M
Sbjct: 173 H---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVT 229
Query: 436 ------LATRLVG---TPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
L +L G T Y PE I +++ T DV++ G + AEL
Sbjct: 230 FPHTKNLKRQLTGHVVTRWYRAPELI------------LLQENYTEAIDVWSIGCIFAEL 277
Query: 487 IT 488
+
Sbjct: 278 LN 279
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 15/104 (14%)
Query: 386 GIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPG 445
G+EY+H VH+DIK N+LL G K++ G+ + + T G+P
Sbjct: 121 GLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS-QGSPA 176
Query: 446 YLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ PPE ++ ++ K D+++ GV L + TG
Sbjct: 177 FQPPEI-----------ANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 21/110 (19%)
Query: 386 GIEYIHDHTKARYV-HRDIKTSNILL----DDGLRAKVADFGLVKLEERTNEKEMLATRL 440
GI Y+H A +V HRD+K +NIL+ + R K+AD G +L + +
Sbjct: 140 GIHYLH----ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPV 195
Query: 441 VGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
V T Y PE + R T D++A G + AEL+T +
Sbjct: 196 VVTFWYRAPELLLGAR------------HYTKAIDIWAIGCIFAELLTSE 233
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 56/141 (39%), Gaps = 19/141 (13%)
Query: 371 LTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERT 430
L + + GI + H H +HRDIK NIL+ K+ DFG +
Sbjct: 121 LDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 177
Query: 431 NEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
E + V T Y PE + V +++ DV+A G ++ E+ G+
Sbjct: 178 GE---VYDDEVATRWYRAPELL------------VGDVKYGKAVDVWAIGCLVTEMFMGE 222
Query: 491 RALIRDDSEPTKMKSLITIMA 511
L DS+ ++ ++ +
Sbjct: 223 -PLFPGDSDIDQLYHIMMCLG 242
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 50/167 (29%)
Query: 300 IGRGGFGNVYFGLLGDREAA------IKKMRSNKSKEFFAELKVL---CKIHHINVFIST 350
IG+GGFG +Y + E+ + K+ + + F ELK K I +I T
Sbjct: 43 IGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRT 102
Query: 351 -----------FGNGSLSDHLHDPLLKGHQPL------------------TWTART--QI 379
+G+G LHD K ++ + ++ +T Q+
Sbjct: 103 RKLKYLGVPKYWGSG-----LHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQL 157
Query: 380 ALDAAKGIEYIHDHTKARYVHRDIKTSNILLD--DGLRAKVADFGLV 424
+L +EYIH+H YVH DIK SN+LL+ + + + D+GL
Sbjct: 158 SLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPDQVYLVDYGLA 201
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 95/253 (37%), Gaps = 50/253 (19%)
Query: 292 NNFDESRIIGRGGFGNVYFGLLGDREAA----IKKMRSNKSKEFFAELKVLCKIHHINVF 347
N + + IG GGFG +Y ++ + K+ ++ F+ELK ++ +
Sbjct: 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCI 96
Query: 348 ISTFGNGSLSDHLHDPLLKGHQPLTWTART-----------------------------Q 378
L D+L PL G + R+ Q
Sbjct: 97 KKWIERKQL-DYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQ 155
Query: 379 IALDAAKGIEYIHDHTKARYVHRDIKTSNILL--DDGLRAKVADFGL-VKLEERTNEKEM 435
+ + +EYIH++ YVH DIK +N+LL + + +AD+GL + N K+
Sbjct: 156 LGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQY 212
Query: 436 LATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIR 495
G G ++ D H V ++ ++DV G + + GK +
Sbjct: 213 QENPRKGHNG-------TIEFTSLDAHKGVA---LSRRSDVEILGYCMLRWLCGKLPWEQ 262
Query: 496 DDSEPTKMKSLIT 508
+ +P +++ T
Sbjct: 263 NLKDPVAVQTAKT 275
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 50/167 (29%)
Query: 300 IGRGGFGNVYFGLLGDREAA------IKKMRSNKSKEFFAELKVL---CKIHHINVFIST 350
IG+GGFG +Y + E+ + K+ + + F ELK K I +I T
Sbjct: 43 IGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRT 102
Query: 351 -----------FGNGSLSDHLHDPLLKGHQPL------------------TWTART--QI 379
+G+G LHD K ++ + ++ +T Q+
Sbjct: 103 RKLKYLGVPKYWGSG-----LHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQL 157
Query: 380 ALDAAKGIEYIHDHTKARYVHRDIKTSNILLD--DGLRAKVADFGLV 424
+L +EYIH+H YVH DIK SN+LL+ + + + D+GL
Sbjct: 158 SLRILDILEYIHEHE---YVHGDIKASNLLLNYKNPDQVYLVDYGLA 201
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 21/96 (21%)
Query: 399 VHRDIKTSNILLDDGLRAKVADFGLVKL--------EERTNEKEMLATRLVGTPGYLPPE 450
+HRD+K SN+L++ KV DFGL ++ E T ++ + V T Y PE
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM-VEFVATRWYRAPE 192
Query: 451 YIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
+ + + DV++ G +LAEL
Sbjct: 193 VMLT------------SAKYSRAMDVWSCGCILAEL 216
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 50/167 (29%)
Query: 300 IGRGGFGNVYFGLLGDREAA------IKKMRSNKSKEFFAELKVL---CKIHHINVFIST 350
IG+GGFG +Y + E+ + K+ + + F ELK K I +I T
Sbjct: 43 IGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRT 102
Query: 351 -----------FGNGSLSDHLHDPLLKGHQPL------------------TWTART--QI 379
+G+G LHD K ++ + ++ +T Q+
Sbjct: 103 RKLKYLGVPKYWGSG-----LHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQL 157
Query: 380 ALDAAKGIEYIHDHTKARYVHRDIKTSNILLD--DGLRAKVADFGLV 424
+L +EYIH+H YVH DIK SN+LL+ + + + D+GL
Sbjct: 158 SLRILDILEYIHEHE---YVHGDIKASNLLLNYKNPDQVYLVDYGLA 201
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 84/213 (39%), Gaps = 42/213 (19%)
Query: 299 IIGRGGFGN-VYFGLLGDREAAIKKMRS-------------NKSKEFFAELKVLC--KIH 342
++G G G VY G+ +R+ A+K++ +S E ++ C K
Sbjct: 31 VLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDR 90
Query: 343 HINVFISTFGNGSLSDHLH--DPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARYVH 400
+L +++ D G +P+T +T G+ ++H VH
Sbjct: 91 QFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQT------TSGLAHLH---SLNIVH 141
Query: 401 RDIKTSNILLD-----DGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVK 455
RD+K NIL+ ++A ++DFGL K + + GT G++ PE
Sbjct: 142 RDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE----- 196
Query: 456 RFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT 488
M S + T D+F+ G V +I+
Sbjct: 197 -----MLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 22/127 (17%)
Query: 395 KARYVHRDIKTSNILLDDGLRA--KVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
K R +H D+K NILL R+ KV DFG E + +R Y PE I
Sbjct: 218 KNRIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQRVYTXIQSRF-----YRAPEVI 271
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSLITIMAA 512
R+ + D+++ G +LAEL+TG L+ + E ++ +I ++
Sbjct: 272 LGARYGMPI-------------DMWSLGCILAELLTG-YPLLPGEDEGDQLACMIELLGM 317
Query: 513 VAEWCLN 519
++ L+
Sbjct: 318 PSQKLLD 324
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 22/127 (17%)
Query: 395 KARYVHRDIKTSNILLDDGLRA--KVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
K R +H D+K NILL R+ KV DFG E + + T + + Y PE I
Sbjct: 218 KNRIIHCDLKPENILLKQQGRSGIKVIDFG-----SSCYEHQRVYT-XIQSRFYRAPEVI 271
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSLITIMAA 512
R+ + D+++ G +LAEL+TG L+ + E ++ +I ++
Sbjct: 272 LGARYGMPI-------------DMWSLGCILAELLTGY-PLLPGEDEGDQLACMIELLGM 317
Query: 513 VAEWCLN 519
++ L+
Sbjct: 318 PSQKLLD 324
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 19/96 (19%)
Query: 391 HDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPE 450
H H++ VH D+K +NI L R K+ DFGL+ E+ G P Y+ PE
Sbjct: 172 HLHSQG-LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE----GDPRYMAPE 226
Query: 451 YIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
+++ T DVF+ G+ + E+
Sbjct: 227 --------------LLQGSYGTAADVFSLGLTILEV 248
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 22/127 (17%)
Query: 395 KARYVHRDIKTSNILLDDGLRA--KVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYI 452
K R +H D+K NILL R+ KV DFG E + +R Y PE I
Sbjct: 218 KNRIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQRVYXXIQSRF-----YRAPEVI 271
Query: 453 FVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSLITIMAA 512
R+ + D+++ G +LAEL+TG L+ + E ++ +I ++
Sbjct: 272 LGARYGMPI-------------DMWSLGCILAELLTG-YPLLPGEDEGDQLACMIELLGM 317
Query: 513 VAEWCLN 519
+ L+
Sbjct: 318 PXQKLLD 324
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 71/185 (38%), Gaps = 42/185 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFG--LLGDREAAIKKMRSNKSKEFFAELKVLCKIHHI----- 344
N + R IG G FG++Y G + E AIK + K+K +L + KI+ +
Sbjct: 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK-LECVKTKH--PQLHIESKIYKMMQGGV 65
Query: 345 --------------NVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIAL--DAAKGIE 388
NV + SL D L ++ +T + L IE
Sbjct: 66 GIPTIRWCGAEGDYNVMVMELLGPSLED------LFNFCSRKFSLKTVLLLADQMISRIE 119
Query: 389 YIHDHTKARYVHRDIKTSNILLDDGLRAK---VADFGLVKLEERTNEKEMLATR----LV 441
YIH ++HRD+K N L+ G + + DFGL K + + R L
Sbjct: 120 YIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLT 176
Query: 442 GTPGY 446
GT Y
Sbjct: 177 GTARY 181
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 16/105 (15%)
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
+ + Y HD+ +HRD+K +LL + G + + E ++A VGTP
Sbjct: 143 EALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTP 199
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
++ PE VKR + DV+ GV+L L++G
Sbjct: 200 HFMAPE--VVKREPY-----------GKPVDVWGCGVILFILLSG 231
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 71/185 (38%), Gaps = 42/185 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFG--LLGDREAAIKKMRSNKSKEFFAELKVLCKIHHI----- 344
N + R IG G FG++Y G + E AIK + K+K +L + KI+ +
Sbjct: 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK-LECVKTKH--PQLHIESKIYKMMQGGV 63
Query: 345 --------------NVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIAL--DAAKGIE 388
NV + SL D L ++ +T + L IE
Sbjct: 64 GIPTIRWCGAEGDYNVMVMELLGPSLED------LFNFCSRKFSLKTVLLLADQMISRIE 117
Query: 389 YIHDHTKARYVHRDIKTSNILLDDGLRAK---VADFGLVKLEERTNEKEMLATR----LV 441
YIH ++HRD+K N L+ G + + DFGL K + + R L
Sbjct: 118 YIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLT 174
Query: 442 GTPGY 446
GT Y
Sbjct: 175 GTARY 179
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 89/218 (40%), Gaps = 41/218 (18%)
Query: 294 FDESRIIGRGGFGNVY-------------FGLLGDREAAIKKMRSNKSKEFFAELKVLCK 340
F+ R++G+GG+G V+ F + ++A I + + + AE +L +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR-NAKDTAHTKAERNILEE 77
Query: 341 IHH--INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALD-------AAKGIEYIH 391
+ H I I F G +L L G + R I ++ A + H
Sbjct: 78 VKHPFIVDLIYAFQTGG-KLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEY 451
H K ++RD+K NI+L+ K+ DFGL K E ++ + T GT Y+ PE
Sbjct: 137 LHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHT-FCGTIEYMAPEI 192
Query: 452 IFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ M D ++ G ++ +++TG
Sbjct: 193 L-------------MRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 16/105 (15%)
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTP 444
+ + Y HD+ +HRD+K +LL + G + + E ++A VGTP
Sbjct: 141 EALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTP 197
Query: 445 GYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
++ PE VKR + DV+ GV+L L++G
Sbjct: 198 HFMAPE--VVKREPY-----------GKPVDVWGCGVILFILLSG 229
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 21/122 (17%)
Query: 380 ALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATR 439
++ K + Y+ K H D+K NILLDD K L+ + T+ K++ R
Sbjct: 143 CIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEK----SLITVRRVTDGKKIQIYR 195
Query: 440 LVGTPGYLPPEYIFVKRFRFDMHSSV------------MELQVTTKTDVFAFGVVLAELI 487
T L F+ D H S+ + L +D+++FG VLAEL
Sbjct: 196 TKSTGIKLID--FGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELY 253
Query: 488 TG 489
TG
Sbjct: 254 TG 255
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 23/120 (19%)
Query: 379 IALDAAKGIEYIHDHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKL--------EERT 430
+ L +G+E IH Y HRD+K +NILL D + + D G + +
Sbjct: 139 LLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQAL 195
Query: 431 NEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGK 490
++ A R T Y PE F H + E +TDV++ G VL ++ G+
Sbjct: 196 TLQDWAAQRC--TISYRAPEL-----FSVQSHCVIDE-----RTDVWSLGCVLYAMMFGE 243
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 80/175 (45%), Gaps = 35/175 (20%)
Query: 378 QIALDAAKGIEYIHDHTKARYVHRD-IKTSNILLDDGLRAKVADFGLVKLEERTNEKEML 436
+ ALD A+G+ ++H T + R + + ++++D+ + A+++ VK ++ +
Sbjct: 115 KFALDMARGMAFLH--TLEPLIPRHALNSRSVMIDEDMTARIS-MADVKFSFQSPGR--- 168
Query: 437 ATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELIT-------- 488
+ P ++ PE + K + S+ D+++F V+L EL+T
Sbjct: 169 ----MYAPAWVAPEALQKKPEDTNRRSA----------DMWSFAVLLWELVTREVPFADL 214
Query: 489 -----GKRALIRDDSEPTKMKSLITIMAAVAEWCLNEDAVDRPEMRDIVAILSQI 538
G + + + PT + ++ + + C+NED RP+ IV IL ++
Sbjct: 215 SNMEIGMKVAL-EGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 23/109 (21%)
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDDGL----RAKVADFGLVKLEERTNEKEMLATRL 440
K +EY+H VHRD+K SNIL D ++ DFG K + E +L T
Sbjct: 127 KTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK--QLRAENGLLMTPC 181
Query: 441 VGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
T ++ PE ++R +D D+++ GV+L ++TG
Sbjct: 182 Y-TANFVAPE--VLERQGYD-----------AACDIWSLGVLLYTMLTG 216
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 36/82 (43%), Gaps = 11/82 (13%)
Query: 399 VHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFR 458
+HRDIK NI++ + K+ DFG ER L GT Y PE + +R
Sbjct: 152 IHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK----LFYTFCGTIEYCAPEVLMGNPYR 207
Query: 459 ---FDMHSSVMELQVTTKTDVF 477
+M S L VT T VF
Sbjct: 208 GPELEMWS----LGVTLYTLVF 225
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 86/218 (39%), Gaps = 41/218 (18%)
Query: 294 FDESRIIGRGGFGNVY-------------FGLLGDREAAIKKMRSNKSKEFFAELKVLCK 340
F+ R++G+GG+G V+ F + ++A I + + + AE +L +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR-NAKDTAHTKAERNILEE 77
Query: 341 IHH--INVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALD-------AAKGIEYIH 391
+ H I I F G +L L G + R I ++ A + H
Sbjct: 78 VKHPFIVDLIYAFQTGG-KLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 392 DHTKARYVHRDIKTSNILLDDGLRAKVADFGLVKLEERTNEKEMLATRLVGTPGYLPPEY 451
H K ++RD+K NI+L+ K+ DFGL K + + GT Y+ PE
Sbjct: 137 LHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCK---ESIHDGTVTHXFCGTIEYMAPEI 192
Query: 452 IFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
+ M D ++ G ++ +++TG
Sbjct: 193 L-------------MRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 92/243 (37%), Gaps = 60/243 (24%)
Query: 300 IGRGGFGNVYFGL--LGDREAAIKKMRSNKSKE-----FFAELKVLCKIHHINV------ 346
+G G +G VY + + + AIK++R +E E+ +L ++ H N+
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 347 --------FISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIALDAAKGIEYIHDHTKARY 398
I + L ++ + ++ G+ + H R
Sbjct: 102 IHHNHRLHLIFEYAENDLKKYM-----DKNPDVSMRVIKSFLYQLINGVNFCHSR---RC 153
Query: 399 VHRDIKTSNILL-----DDGLRAKVADFGLVK-----LEERTNEKEMLATRLVGTPGYLP 448
+HRD+K N+LL + K+ DFGL + + + T+E + T Y P
Sbjct: 154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHE--------IITLWYRP 205
Query: 449 PEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITGKRALIRDDSEPTKMKSLIT 508
PE + R +T D+++ + AE++ K L DSE ++ +
Sbjct: 206 PEILLGSR------------HYSTSVDIWSIACIWAEMLM-KTPLFPGDSEIDQLFKIFE 252
Query: 509 IMA 511
++
Sbjct: 253 VLG 255
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 23/110 (20%)
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRA----KVADFGLVKLEERTNEKEMLATR 439
K +EY+H VHRD+K SNIL D ++ DFG K + E +L T
Sbjct: 131 GKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAK--QLRAENGLLMTP 185
Query: 440 LVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
T ++ PE +KR +D D+++ G++L ++ G
Sbjct: 186 CY-TANFVAPE--VLKRQGYD-----------EGCDIWSLGILLYTMLAG 221
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 61/242 (25%)
Query: 293 NFDES--------RIIGRGGFGNVYF-GLLGDREAAIKKMRSNKSKEFFAELKVLCKIH- 342
NF++S +I+G G G V F G R A+K+M + E+K+L +
Sbjct: 8 NFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDD 67
Query: 343 HINV-------------FIS-TFGNGSLSDHLHDP--------LLKGHQPLTWTARTQIA 380
H NV +I+ N +L D + L K + P++ +
Sbjct: 68 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI--- 124
Query: 381 LDAAKGIEYIHDHTKARYVHRDIKTSNILLD-------------DGLRAKVADFGLV-KL 426
A G+ ++H + +HRD+K NIL+ + LR ++DFGL KL
Sbjct: 125 ---ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 178
Query: 427 EERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
+ + GT G+ PE + + ++ + ++T D+F+ G V +
Sbjct: 179 DSGQSSFRTNLNNPSGTSGWRAPELL------EESNNLQTKRRLTRSIDIFSMGCVFYYI 232
Query: 487 IT 488
++
Sbjct: 233 LS 234
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 23/110 (20%)
Query: 384 AKGIEYIHDHTKARYVHRDIKTSNILLDDGLRA----KVADFGLVKLEERTNEKEMLATR 439
K +EY+H VHRD+K SNIL D ++ DFG K + E +L T
Sbjct: 131 GKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAK--QLRAENGLLMTP 185
Query: 440 LVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
T ++ PE +KR +D D+++ G++L ++ G
Sbjct: 186 CY-TANFVAPE--VLKRQGYD-----------EGCDIWSLGILLYTMLAG 221
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 70/185 (37%), Gaps = 42/185 (22%)
Query: 292 NNFDESRIIGRGGFGNVYFG--LLGDREAAIKKMRSNKSKEFFAELKVLCKIHHI----- 344
N + R IG G FG++Y G + E AIK + K+K +L + K + +
Sbjct: 9 NKYRLGRKIGSGSFGDIYLGANIASGEEVAIK-LECVKTKH--PQLHIESKFYKMMQGGV 65
Query: 345 --------------NVFISTFGNGSLSDHLHDPLLKGHQPLTWTARTQIAL--DAAKGIE 388
NV + SL D L ++ +T + L IE
Sbjct: 66 GIPSIKWCGAEGDYNVMVMELLGPSLED------LFNFCSRKFSLKTVLLLADQMISRIE 119
Query: 389 YIHDHTKARYVHRDIKTSNILLDDGLRAK---VADFGLVKLEERTNEKEMLATR----LV 441
YIH ++HRD+K N L+ G + + DFGL K + + R L
Sbjct: 120 YIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLT 176
Query: 442 GTPGY 446
GT Y
Sbjct: 177 GTARY 181
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 100/253 (39%), Gaps = 58/253 (22%)
Query: 275 ESERTIIFSLEEIEEATNNFDES-RIIGRGGFGNVYF-GLLGDREAAIKKMRSNKSKEFF 332
+ ++ I ++ E++ N S +I+G G G V F G R A+K+M +
Sbjct: 15 KGRKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIAL 74
Query: 333 AELKVLCKIH-HINV-------------FIS-TFGNGSLSDHLHDP--------LLKGHQ 369
E+K+L + H NV +I+ N +L D + L K +
Sbjct: 75 MEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYN 134
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLD-------------DGLRA 416
P++ + A G+ ++H + +HRD+K NIL+ + LR
Sbjct: 135 PISLLRQI------ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 185
Query: 417 KVADFGLV-KLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTD 475
++DFGL KL+ GT G+ PE + + ++T D
Sbjct: 186 LISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELL----------EESTKRRLTRSID 235
Query: 476 VFAFGVVLAELIT 488
+F+ G V +++
Sbjct: 236 IFSMGCVFYYILS 248
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 13/55 (23%)
Query: 367 GHQPLTWTART-----------QIALDAAKGIEYIHDHTKARYVHRDIKTSNILL 410
GH L W ++ +I +G++Y+H TK R +H DIK NILL
Sbjct: 128 GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH--TKCRIIHTDIKPENILL 180
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 100/253 (39%), Gaps = 58/253 (22%)
Query: 275 ESERTIIFSLEEIEEATNNFDES-RIIGRGGFGNVYF-GLLGDREAAIKKMRSNKSKEFF 332
+ ++ I ++ E++ N S +I+G G G V F G R A+K+M +
Sbjct: 15 KGRKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIAL 74
Query: 333 AELKVLCKIH-HINV-------------FIS-TFGNGSLSDHLHDP--------LLKGHQ 369
E+K+L + H NV +I+ N +L D + L K +
Sbjct: 75 MEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYN 134
Query: 370 PLTWTARTQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLD-------------DGLRA 416
P++ + A G+ ++H + +HRD+K NIL+ + LR
Sbjct: 135 PISLLRQI------ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 185
Query: 417 KVADFGLV-KLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTD 475
++DFGL KL+ GT G+ PE + + ++T D
Sbjct: 186 LISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELL----------EESTKRRLTRSID 235
Query: 476 VFAFGVVLAELIT 488
+F+ G V +++
Sbjct: 236 IFSMGCVFYYILS 248
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 13/55 (23%)
Query: 367 GHQPLTWTART-----------QIALDAAKGIEYIHDHTKARYVHRDIKTSNILL 410
GH L W ++ +I +G++Y+H TK R +H DIK NILL
Sbjct: 112 GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH--TKCRIIHTDIKPENILL 164
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 23/109 (21%)
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILLDDGL----RAKVADFGLVKLEERTNEKEMLATRL 440
K +EY+H VHRD+K SNIL D ++ DFG K + E +L T
Sbjct: 127 KTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK--QLRAENGLLXTPC 181
Query: 441 VGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAELITG 489
T ++ PE ++R +D D+++ GV+L +TG
Sbjct: 182 Y-TANFVAPE--VLERQGYD-----------AACDIWSLGVLLYTXLTG 216
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 97/242 (40%), Gaps = 61/242 (25%)
Query: 293 NFDES--------RIIGRGGFGNVYF-GLLGDREAAIKKMRSNKSKEFFAELKVLCKIH- 342
NF++S +I+G G G V F G R A+K+M + E+K+L +
Sbjct: 8 NFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDD 67
Query: 343 HINV-------------FIS-TFGNGSLSDHLHDP--------LLKGHQPLTWTARTQIA 380
H NV +I+ N +L D + L K + P++ +
Sbjct: 68 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI--- 124
Query: 381 LDAAKGIEYIHDHTKARYVHRDIKTSNILLD-------------DGLRAKVADFGLV-KL 426
A G+ ++H + +HRD+K NIL+ + LR ++DFGL KL
Sbjct: 125 ---ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 178
Query: 427 EERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGVVLAEL 486
+ GT G+ PE + + ++ + ++T D+F+ G V +
Sbjct: 179 DSGQXXFRXNLNNPSGTSGWRAPELL------EESNNLQTKRRLTRSIDIFSMGCVFYYI 232
Query: 487 IT 488
++
Sbjct: 233 LS 234
>pdb|4AIM|A Chain A, Crystal Structure Of C. Crescentus Pnpase Bound To Rnase E
Recognition Peptide
Length = 726
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 422 GLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGV 481
G K E R +EKE L +RL+ P + P +FVK F+ ++ V LQ + D G+
Sbjct: 90 GFFKREGRPSEKETLVSRLIDRP--IRP--LFVKGFKNEVQVVVTVLQHDLENDPDILGM 145
Query: 482 VLA 484
V A
Sbjct: 146 VAA 148
>pdb|4AM3|A Chain A, Crystal Structure Of C. Crescentus Pnpase Bound To Rna
pdb|4AM3|B Chain B, Crystal Structure Of C. Crescentus Pnpase Bound To Rna
pdb|4AM3|C Chain C, Crystal Structure Of C. Crescentus Pnpase Bound To Rna
Length = 717
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 422 GLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGV 481
G K E R +EKE L +RL+ P + P +FVK F+ ++ V LQ + D G+
Sbjct: 81 GFFKREGRPSEKETLVSRLIDRP--IRP--LFVKGFKNEVQVVVTVLQHDLENDPDILGM 136
Query: 482 VLA 484
V A
Sbjct: 137 VAA 139
>pdb|4AID|A Chain A, Crystal Structure Of C. Crescentus Pnpase Bound To Rnase E
Recognition Peptide
pdb|4AID|B Chain B, Crystal Structure Of C. Crescentus Pnpase Bound To Rnase E
Recognition Peptide
pdb|4AID|C Chain C, Crystal Structure Of C. Crescentus Pnpase Bound To Rnase E
Recognition Peptide
Length = 726
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 422 GLVKLEERTNEKEMLATRLVGTPGYLPPEYIFVKRFRFDMHSSVMELQVTTKTDVFAFGV 481
G K E R +EKE L +RL+ P + P +FVK F+ ++ V LQ + D G+
Sbjct: 90 GFFKREGRPSEKETLVSRLIDRP--IRP--LFVKGFKNEVQVVVTVLQHDLENDPDILGM 145
Query: 482 VLA 484
V A
Sbjct: 146 VAA 148
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 60/146 (41%), Gaps = 33/146 (22%)
Query: 291 TNNFDESRIIGRGGFGNVY--FGLLGDREAAIKKMR---------SNKSKEFFAELKVLC 339
T F E IG G FG+V+ L AIK+ + N +E +A VL
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAH-AVLG 66
Query: 340 KIHHINVFISTFGNGSLSDH------------LHDPLLKGHQPLTWTARTQIA---LDAA 384
+ H+ + S + DH L D + + ++ +++ ++ L
Sbjct: 67 QHSHVVRYFSAWAE---DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 123
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILL 410
+G+ YIH + VH DIK SNI +
Sbjct: 124 RGLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 60/146 (41%), Gaps = 33/146 (22%)
Query: 291 TNNFDESRIIGRGGFGNVY--FGLLGDREAAIKKMR---------SNKSKEFFAELKVLC 339
T F E IG G FG+V+ L AIK+ + N +E +A VL
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAH-AVLG 68
Query: 340 KIHHINVFISTFGNGSLSDH------------LHDPLLKGHQPLTWTARTQIA---LDAA 384
+ H+ + S + DH L D + + ++ +++ ++ L
Sbjct: 69 QHSHVVRYFSAWAE---DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 125
Query: 385 KGIEYIHDHTKARYVHRDIKTSNILL 410
+G+ YIH + VH DIK SNI +
Sbjct: 126 RGLRYIHSMS---LVHMDIKPSNIFI 148
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,848,104
Number of Sequences: 62578
Number of extensions: 562505
Number of successful extensions: 3282
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 262
Number of HSP's that attempted gapping in prelim test: 1390
Number of HSP's gapped (non-prelim): 1231
length of query: 563
length of database: 14,973,337
effective HSP length: 104
effective length of query: 459
effective length of database: 8,465,225
effective search space: 3885538275
effective search space used: 3885538275
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)