BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044999
(461 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4DB9|A Chain A, Designed Armadillo Repeat Protein (Yiiim3aiii)
pdb|4DB9|B Chain B, Designed Armadillo Repeat Protein (Yiiim3aiii)
pdb|4DB9|C Chain C, Designed Armadillo Repeat Protein (Yiiim3aiii)
pdb|4DB9|D Chain D, Designed Armadillo Repeat Protein (Yiiim3aiii)
pdb|4DB9|E Chain E, Designed Armadillo Repeat Protein (Yiiim3aiii)
pdb|4DB9|F Chain F, Designed Armadillo Repeat Protein (Yiiim3aiii)
Length = 210
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 330 HSVPVIRNSGAIPILVNLLRGENDEVREKVSGAIAQLSYNEADRV-ALADAGAVPIMIEL 388
+ + ++GA+P LV LL N+++ ++ A++ ++ +++ A+ DAGA+P +++L
Sbjct: 87 EQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQL 146
Query: 389 LHDESEELRDNAAESLINF-SEDPLQHERISEAIGIPSFQSMQS 431
L +E++ A +L N S Q + + EA P+ + +QS
Sbjct: 147 LSSPNEQILQEALWALSNIASGGNEQKQAVKEAGAEPALEQLQS 190
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 330 HSVPVIRNSGAIPILVNLLRGENDEVREKVSGAIAQLSYNEADRV-ALADAGAVPIMIEL 388
+ + ++GA+P LV LL N+++ ++ A++ ++ +++ A+ DAGA+P +++L
Sbjct: 45 EQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQL 104
Query: 389 LHDESEELRDNAAESLINFS 408
L +E++ A +L N +
Sbjct: 105 LSSPNEQILQEALWALSNIA 124
>pdb|4DB8|A Chain A, Designed Armadillo-Repeat Protein
pdb|4DB8|B Chain B, Designed Armadillo-Repeat Protein
pdb|4DB8|C Chain C, Designed Armadillo-Repeat Protein
pdb|4DB8|D Chain D, Designed Armadillo-Repeat Protein
Length = 252
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 97/228 (42%), Gaps = 56/228 (24%)
Query: 217 LVELGVIPGLVELFHIGD--------WTTKLVA--GNTLGVVAAHVEYITPVAEAGAIPL 266
+++ G +P LV+L + W +A GN E I V +AGA+P
Sbjct: 50 VIDAGALPALVQLLSSPNEQILQEALWALSNIASGGN---------EQIQAVIDAGALPA 100
Query: 267 YAELLQGPDSTGKEISEDVFCILAVSEANANAIAEHLVRILRXXXXXXXXXXXXXXXXXX 326
+LL P+ ++I ++ L+ + N
Sbjct: 101 LVQLLSSPN---EQILQEALWALSNIASGGN----------------------------- 128
Query: 327 XYKHSVPVIRNSGAIPILVNLLRGENDEVREKVSGAIAQLSYNEADRV-ALADAGAVPIM 385
+ + ++GA+P LV LL N+++ ++ A++ ++ +++ A+ DAGA+P +
Sbjct: 129 ---EQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPAL 185
Query: 386 IELLHDESEELRDNAAESLINF-SEDPLQHERISEAIGIPSFQSMQSR 432
++LL +E++ A +L N S Q + + EA + + +QS
Sbjct: 186 VQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSH 233
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 83/188 (44%), Gaps = 37/188 (19%)
Query: 223 IPGLVELFHIGDWTTKLVAGNTLG-VVAAHVEYITPVAEAGAIPLYAELLQGPDSTGKEI 281
+P + + + D +L A +++ E I V +AGA+P +LL P+ ++I
Sbjct: 14 LPQMTQQLNSDDMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSSPN---EQI 70
Query: 282 SEDVFCILAVSEANANAIAEHLVRILRXXXXXXXXXXXXXXXXXXXYKHSVPVIRNSGAI 341
++ L+ + N + + ++GA+
Sbjct: 71 LQEALWALSNIASGGN--------------------------------EQIQAVIDAGAL 98
Query: 342 PILVNLLRGENDEVREKVSGAIAQLSYNEADRV-ALADAGAVPIMIELLHDESEELRDNA 400
P LV LL N+++ ++ A++ ++ +++ A+ DAGA+P +++LL +E++ A
Sbjct: 99 PALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEA 158
Query: 401 AESLINFS 408
+L N +
Sbjct: 159 LWALSNIA 166
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 56/240 (23%)
Query: 177 ICLGGLRYLVEAVSFGSMVSRERACQAIGLLAVTGRAR-RLLVELGVIPGLVELFHIGD- 234
I G L LV+ +S + + A A+ +A G + + +++ G +P LV+L +
Sbjct: 51 IDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNE 110
Query: 235 -------WTTKLVA--GNTLGVVAAHVEYITPVAEAGAIPLYAELLQGPDSTGKEISEDV 285
W +A GN E I V +AGA+P +LL P+ ++I ++
Sbjct: 111 QILQEALWALSNIASGGN---------EQIQAVIDAGALPALVQLLSSPN---EQILQEA 158
Query: 286 FCILAVSEANANAIAEHLVRILRXXXXXXXXXXXXXXXXXXXYKHSVPVIRNSGAIPILV 345
L+ + N + + ++GA+P LV
Sbjct: 159 LWALSNIASGGN--------------------------------EQIQAVIDAGALPALV 186
Query: 346 NLLRGENDEVREKVSGAIAQL-SYNEADRVALADAGAVPIMIELLHDESEELRDNAAESL 404
LL N+++ ++ A++ + S + A+ +AGA+ + +L E+E+++ A E+L
Sbjct: 187 QLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHENEKIQKEAQEAL 246
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 21/164 (12%)
Query: 124 FVTFGNENRVIVARNGGLEIVIDLLNSCNDGT-RRYXXXXXXXXXXXXXXXXXXICLGGL 182
++ GNE V G L ++ LL+S N+ + I G L
Sbjct: 39 ILSDGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGAL 98
Query: 183 RYLVEAVSFGSMVSRERACQAIGLLAVTGRAR-RLLVELGVIPGLVELFHIGD------- 234
LV+ +S + + A A+ +A G + + +++ G +P LV+L +
Sbjct: 99 PALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEA 158
Query: 235 -WTTKLVA--GNTLGVVAAHVEYITPVAEAGAIPLYAELLQGPD 275
W +A GN E I V +AGA+P +LL P+
Sbjct: 159 LWALSNIASGGN---------EQIQAVIDAGALPALVQLLSSPN 193
>pdb|4DBA|A Chain A, Designed Armadillo Repeat Protein (Yiim3aii)
pdb|4DBA|B Chain B, Designed Armadillo Repeat Protein (Yiim3aii)
pdb|4DBA|C Chain C, Designed Armadillo Repeat Protein (Yiim3aii)
pdb|4DBA|D Chain D, Designed Armadillo Repeat Protein (Yiim3aii)
Length = 210
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 93/213 (43%), Gaps = 38/213 (17%)
Query: 223 IPGLVELFHIGDWTTKLVAGNTLG-VVAAHVEYITPVAEAGAIPLYAELLQGPDSTGKEI 281
+P + + + D +L A +++ E I V +AGA+P +LL P+ ++I
Sbjct: 14 LPQMTQQLNSDDMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSSPN---EQI 70
Query: 282 SEDVFCILAVSEANANAIAEHLVRILRXXXXXXXXXXXXXXXXXXXYKHSVPVIRNSGAI 341
++ L+ + N + + ++GA+
Sbjct: 71 LQEALWALSNIASGGN--------------------------------EQIQAVIDAGAL 98
Query: 342 PILVNLLRGENDEVREKVSGAIAQLSYNEADRV-ALADAGAVPIMIELLHDESEELRDNA 400
P LV LL N+++ ++ A++ ++ +++ A+ DAGA+P +++LL +E++ A
Sbjct: 99 PALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEA 158
Query: 401 AESLINF-SEDPLQHERISEAIGIPSFQSMQSR 432
+L N S Q + + EA + + +QS
Sbjct: 159 LWALSNIASGGNEQKQAVKEAGALEKLEQLQSH 191
Score = 35.0 bits (79), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 83/190 (43%), Gaps = 37/190 (19%)
Query: 217 LVELGVIPGLVELFHIGDWTTKLVAGNTLGVVAAH-VEYITPVAEAGAIPLYAELLQGPD 275
+++ G +P LV+L + A L +A+ E I V +AGA+P +LL P+
Sbjct: 50 VIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPN 109
Query: 276 STGKEISEDVFCILAVSEANANAIAEHLVRILRXXXXXXXXXXXXXXXXXXXYKHSVPVI 335
++I ++ L+ + N + +
Sbjct: 110 ---EQILQEALWALSNIASGGN--------------------------------EQIQAV 134
Query: 336 RNSGAIPILVNLLRGENDEVREKVSGAIAQL-SYNEADRVALADAGAVPIMIELLHDESE 394
++GA+P LV LL N+++ ++ A++ + S + A+ +AGA+ + +L E+E
Sbjct: 135 IDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHENE 194
Query: 395 ELRDNAAESL 404
+++ A E+L
Sbjct: 195 KIQKEAQEAL 204
>pdb|4DB6|A Chain A, Designed Armadillo Repeat Protein (Yiiim3aii)
Length = 210
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 332 VPVIRNSGAIPILVNLLRGENDEVREKVSGAIAQLSYNEADRV-ALADAGAVPIMIELLH 390
+ + ++GA+P LV LL N+++ ++ A++ ++ +++ A+ DAGA+P +++LL
Sbjct: 89 IQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS 148
Query: 391 DESEELRDNAAESLINF-SEDPLQHERISEAIGIPSFQSMQSR 432
+E++ A +L N S Q + + EA + + +QS
Sbjct: 149 SPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSH 191
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 332 VPVIRNSGAIPILVNLLRGENDEVREKVSGAIAQLSYNEADRV-ALADAGAVPIMIELLH 390
+ + ++GA+P LV LL N+++ ++ A++ ++ +++ A+ DAGA+P +++LL
Sbjct: 47 IQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS 106
Query: 391 DESEELRDNAAESLINFS 408
+E++ A +L N +
Sbjct: 107 SPNEQILQEALWALSNIA 124
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 83/199 (41%), Gaps = 55/199 (27%)
Query: 217 LVELGVIPGLVELFHIGD--------WTTKLVA--GNTLGVVAAHVEYITPVAEAGAIPL 266
+++ G +P LV+L + W +A GN E I V +AGA+P
Sbjct: 50 VIDAGALPALVQLLSSPNEQILQEALWALSNIASGGN---------EQIQAVIDAGALPA 100
Query: 267 YAELLQGPDSTGKEISEDVFCILAVSEANANAIAEHLVRILRXXXXXXXXXXXXXXXXXX 326
+LL P+ ++I ++ L+ + N
Sbjct: 101 LVQLLSSPN---EQILQEALWALSNIASGGN----------------------------- 128
Query: 327 XYKHSVPVIRNSGAIPILVNLLRGENDEVREKVSGAIAQL-SYNEADRVALADAGAVPIM 385
+ + ++GA+P LV LL N+++ ++ A++ + S + A+ +AGA+ +
Sbjct: 129 ---EQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKL 185
Query: 386 IELLHDESEELRDNAAESL 404
+L E+E+++ A E+L
Sbjct: 186 EQLQSHENEKIQKEAQEAL 204
>pdb|1OYZ|A Chain A, X-Ray Structure Of Yiba_ecoli Northeast Structural
Genomics Consortium Target Et31
Length = 280
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 331 SVPVIRNSGAIPILVNLLRGENDEVREKVSGAIAQLSYNEADRVALADAGAVPIMIELLH 390
++ VI + IP+L+NLL+ N +VR + AI Y+ +D + D +E L
Sbjct: 151 AISVINDKATIPLLINLLKDPNGDVRNWAAFAININKYDNSD---IRDC-----FVEXLQ 202
Query: 391 DESEELR 397
D++EE+R
Sbjct: 203 DKNEEVR 209
>pdb|2YNS|A Chain A, Rimp_alpha_b54nls
pdb|2YNS|B Chain B, Rimp_alpha_b54nls
pdb|4B8O|A Chain A, Rimp_alpha_sv40tagnls
pdb|4B8P|A Chain A, Rimp_alpha_a89nls
pdb|4B8P|B Chain B, Rimp_alpha_a89nls
Length = 490
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 334 VIRNSGAIPILVNLLRGENDEVREKVSGAIAQLSYN--EADRVALADAGAVPIMIELLHD 391
V+ + GA+PI V LL +D+VRE+ A+ ++ + + + LA+ +P++ +L
Sbjct: 117 VVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSPKCRDLVLANGALLPLLAQLNEH 176
Query: 392 ESEELRDNAAESLINFSEDPLQHERISEAIGIPSFQSMQSRL 433
+ NA +L NF Q PSF+ + L
Sbjct: 177 TKLSMLRNATWTLSNFCRGKPQ----------PSFEQTRPAL 208
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 338 SGAIPILVNLLRGEN-DEVREKVSGAIAQLSYNEADRVALA-DAGAVPIMIELLHDESEE 395
SG +P V L E+ +++ + + A+ ++ ++ + D GAVPI ++LL S++
Sbjct: 78 SGVVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDD 137
Query: 396 LRDNAAESLINFSED 410
+R+ A +L N + D
Sbjct: 138 VREQAVWALGNVAGD 152
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 340 AIPILVNLLRGENDEVREKVSGAIAQLSYNEADRV-ALADAGAVPIMIELL 389
A+P L L+ ++EV A++ LS D++ A+ +AG P ++ELL
Sbjct: 207 ALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELL 257
>pdb|4B8J|A Chain A, Rimp_alpha1a
Length = 528
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 334 VIRNSGAIPILVNLLRGENDEVREKVSGAIAQLSYN--EADRVALADAGAVPIMIELLHD 391
V+ + GA+PI V LL +D+VRE+ A+ ++ + + + LA+ +P++ +L
Sbjct: 155 VVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSPKCRDLVLANGALLPLLAQLNEH 214
Query: 392 ESEELRDNAAESLINFSEDPLQHERISEAIGIPSFQSMQSRL 433
+ NA +L NF Q PSF+ + L
Sbjct: 215 TKLSMLRNATWTLSNFCRGKPQ----------PSFEQTRPAL 246
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 338 SGAIPILVNLLRGEN-DEVREKVSGAIAQLSYNEADRVALA-DAGAVPIMIELLHDESEE 395
SG +P V L E+ +++ + + A+ ++ ++ + D GAVPI ++LL S++
Sbjct: 116 SGVVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDD 175
Query: 396 LRDNAAESLINFSED 410
+R+ A +L N + D
Sbjct: 176 VREQAVWALGNVAGD 190
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 340 AIPILVNLLRGENDEVREKVSGAIAQLSYNEADRV-ALADAGAVPIMIELL 389
A+P L L+ ++EV A++ LS D++ A+ +AG P ++ELL
Sbjct: 245 ALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELL 295
>pdb|2GL7|A Chain A, Crystal Structure Of A Beta-CateninBCL9TCF4 COMPLEX
pdb|2GL7|D Chain D, Crystal Structure Of A Beta-CateninBCL9TCF4 COMPLEX
Length = 550
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 330 HSVPVIRNSGAIPILVNLLRGENDEVREKVSGAIAQLSYNEADRVALADAGAVPIMIELL 389
H+ VIR IP+ V LL + ++ +G + +L+ ++ A+ GA + ELL
Sbjct: 449 HNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELL 508
Query: 390 HDESEELRDNAAESLINFSEDPLQ 413
H +E + AA L SED Q
Sbjct: 509 HSRNEGVATYAAAVLFRMSEDKPQ 532
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 22/98 (22%)
Query: 335 IRNSGAIPILVNLL-RGEND---------------------EVREKVSGAIAQLSYNEAD 372
+R GAIP LV LL R D E+ E +GA+ L+ + +
Sbjct: 391 LREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHN 450
Query: 373 RVALADAGAVPIMIELLHDESEELRDNAAESLINFSED 410
R+ + +P+ ++LL+ E ++ AA L ++D
Sbjct: 451 RIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQD 488
>pdb|1JPW|A Chain A, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex
pdb|1JPW|B Chain B, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex
pdb|1JPW|C Chain C, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex
Length = 540
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 330 HSVPVIRNSGAIPILVNLLRGENDEVREKVSGAIAQLSYNEADRVALADAGAVPIMIELL 389
H+ VIR IP+ V LL + ++ +G + +L+ ++ A+ GA + ELL
Sbjct: 455 HNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELL 514
Query: 390 HDESEELRDNAAESLINFSEDPLQ 413
H +E + AA L SED Q
Sbjct: 515 HSRNEGVATYAAAVLFRMSEDKPQ 538
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 22/98 (22%)
Query: 335 IRNSGAIPILVNLL-RGEND---------------------EVREKVSGAIAQLSYNEAD 372
+R GAIP LV LL R D E+ E +GA+ L+ + +
Sbjct: 397 LREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHN 456
Query: 373 RVALADAGAVPIMIELLHDESEELRDNAAESLINFSED 410
R+ + +P+ ++LL+ E ++ AA L ++D
Sbjct: 457 RIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQD 494
>pdb|1I7X|A Chain A, Beta-CateninE-Cadherin Complex
pdb|1I7X|C Chain C, Beta-CateninE-Cadherin Complex
pdb|1I7W|A Chain A, Beta-CateninPHOSPHORYLATED E-Cadherin Complex
pdb|1I7W|C Chain C, Beta-CateninPHOSPHORYLATED E-Cadherin Complex
pdb|1JPP|A Chain A, The Structure Of A Beta-Catenin Binding Repeat From
Adenomatous Polyposis Coli (Apc) In Complex With
Beta-Catenin
pdb|1JPP|B Chain B, The Structure Of A Beta-Catenin Binding Repeat From
Adenomatous Polyposis Coli (Apc) In Complex With
Beta-Catenin
pdb|1M1E|A Chain A, Beta-Catenin Armadillo Repeat Domain Bound To Icat
pdb|1V18|A Chain A, The Crystal Structure Of Beta-Catenin Armadillo Repeat
Complexed With A Phosphorylated Apc 20mer Repeat
Length = 538
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 330 HSVPVIRNSGAIPILVNLLRGENDEVREKVSGAIAQLSYNEADRVALADAGAVPIMIELL 389
H+ VIR IP+ V LL + ++ +G + +L+ ++ A+ GA + ELL
Sbjct: 452 HNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELL 511
Query: 390 HDESEELRDNAAESLINFSEDPLQ 413
H +E + AA L SED Q
Sbjct: 512 HSRNEGVATYAAAVLFRMSEDKPQ 535
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 22/98 (22%)
Query: 335 IRNSGAIPILVNLL-RGEND---------------------EVREKVSGAIAQLSYNEAD 372
+R GAIP LV LL R D E+ E +GA+ L+ + +
Sbjct: 394 LREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHN 453
Query: 373 RVALADAGAVPIMIELLHDESEELRDNAAESLINFSED 410
R+ + +P+ ++LL+ E ++ AA L ++D
Sbjct: 454 RIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQD 491
>pdb|3OUW|A Chain A, Structure Of Beta-Catenin With Lef-1
pdb|3OUX|A Chain A, Structure Of Beta-Catenin With Phosphorylated Lef-1
Length = 540
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 330 HSVPVIRNSGAIPILVNLLRGENDEVREKVSGAIAQLSYNEADRVALADAGAVPIMIELL 389
H+ VIR IP+ V LL + ++ +G + +L+ ++ A+ GA + ELL
Sbjct: 454 HNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELL 513
Query: 390 HDESEELRDNAAESLINFSEDPLQ 413
H +E + AA L SED Q
Sbjct: 514 HSRNEGVATYAAAVLFRMSEDKPQ 537
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 22/98 (22%)
Query: 335 IRNSGAIPILVNLL-RGEND---------------------EVREKVSGAIAQLSYNEAD 372
+R GAIP LV LL R D E+ E +GA+ L+ + +
Sbjct: 396 LREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHN 455
Query: 373 RVALADAGAVPIMIELLHDESEELRDNAAESLINFSED 410
R+ + +P+ ++LL+ E ++ AA L ++D
Sbjct: 456 RIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQD 493
>pdb|2BCT|A Chain A, The Armadillo Repeat Region From Murine Beta-Catenin
Length = 516
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%)
Query: 330 HSVPVIRNSGAIPILVNLLRGENDEVREKVSGAIAQLSYNEADRVALADAGAVPIMIELL 389
H+ VIR IP+ V LL + ++ +G + +L+ ++ A+ GA + ELL
Sbjct: 436 HNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELL 495
Query: 390 HDESEELRDNAAESLINFSED 410
H +E + AA L SED
Sbjct: 496 HSRNEGVATYAAAVLFRMSED 516
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 22/98 (22%)
Query: 335 IRNSGAIPILVNLL-RGEND---------------------EVREKVSGAIAQLSYNEAD 372
+R GAIP LV LL R D E+ E +GA+ L+ + +
Sbjct: 378 LREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHN 437
Query: 373 RVALADAGAVPIMIELLHDESEELRDNAAESLINFSED 410
R+ + +P+ ++LL+ E ++ AA L ++D
Sbjct: 438 RIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQD 475
>pdb|4DJS|A Chain A, Structure Of Beta-Catenin In Complex With A Stapled
Peptide Inhibitor
Length = 518
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%)
Query: 330 HSVPVIRNSGAIPILVNLLRGENDEVREKVSGAIAQLSYNEADRVALADAGAVPIMIELL 389
H+ VIR IP+ V LL + ++ +G + +L+ ++ A+ GA + ELL
Sbjct: 438 HNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELL 497
Query: 390 HDESEELRDNAAESLINFSED 410
H +E + AA L SED
Sbjct: 498 HSRNEGVATYAAAVLFRMSED 518
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 22/98 (22%)
Query: 335 IRNSGAIPILVNLL-RGEND---------------------EVREKVSGAIAQLSYNEAD 372
+R GAIP LV LL R D E+ E +GA+ L+ + +
Sbjct: 380 LREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHN 439
Query: 373 RVALADAGAVPIMIELLHDESEELRDNAAESLINFSED 410
R+ + +P+ ++LL+ E ++ AA L ++D
Sbjct: 440 RIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQD 477
>pdb|1QZ7|A Chain A, Beta-Catenin Binding Domain Of Axin In Complex With Beta-
Catenin
Length = 533
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%)
Query: 330 HSVPVIRNSGAIPILVNLLRGENDEVREKVSGAIAQLSYNEADRVALADAGAVPIMIELL 389
H+ VIR IP+ V LL + ++ +G + +L+ ++ A+ GA + ELL
Sbjct: 453 HNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELL 512
Query: 390 HDESEELRDNAAESLINFSED 410
H +E + AA L SED
Sbjct: 513 HSRNEGVATYAAAVLFRMSED 533
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 22/98 (22%)
Query: 335 IRNSGAIPILVNLL-RGEND---------------------EVREKVSGAIAQLSYNEAD 372
+R GAIP LV LL R D E+ E +GA+ L+ + +
Sbjct: 395 LREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHN 454
Query: 373 RVALADAGAVPIMIELLHDESEELRDNAAESLINFSED 410
R+ + +P+ ++LL+ E ++ AA L ++D
Sbjct: 455 RIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQD 492
>pdb|2Z6H|A Chain A, Crystal Structure Of Beta-Catenin Armadillo Repeat Region
And Its C-Terminal Domain
Length = 644
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 330 HSVPVIRNSGAIPILVNLLRGENDEVREKVSGAIAQLSYNEADRVALADAGAVPIMIELL 389
H+ VIR IP+ V LL + ++ +G + +L+ ++ A+ GA + ELL
Sbjct: 448 HNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELL 507
Query: 390 HDESEELRDNAAESLINFSEDPLQ 413
H +E + AA L SED Q
Sbjct: 508 HSRNEGVATYAAAVLFRMSEDKPQ 531
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 22/98 (22%)
Query: 335 IRNSGAIPILVNLL-RGEND---------------------EVREKVSGAIAQLSYNEAD 372
+R GAIP LV LL R D E+ E +GA+ L+ + +
Sbjct: 390 LREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHN 449
Query: 373 RVALADAGAVPIMIELLHDESEELRDNAAESLINFSED 410
R+ + +P+ ++LL+ E ++ AA L ++D
Sbjct: 450 RIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQD 487
Score = 28.1 bits (61), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/101 (18%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 50 IPILARLLGENNFSGNLTRSIQQAAAYCLKQIASQADGALATEIGQSGVINSVLRLFPQS 109
IP L ++LG S+ A L + +GA + +G + ++ L ++
Sbjct: 100 IPALVKMLGSP------VDSVLFYAITTLHNLLLHQEGA-KMAVRLAGGLQKMVALLNKT 152
Query: 110 DDSFRTVLVKCLRVFVTFGNENRVIVARNGGLEIVIDLLNS 150
+ F + CL++ E+++I+ +GG + +++++ +
Sbjct: 153 NVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRT 193
>pdb|3IFQ|A Chain A, Interction Of Plakoglobin And Beta-Catenin With Desmosomal
Cadherins
pdb|3IFQ|B Chain B, Interction Of Plakoglobin And Beta-Catenin With Desmosomal
Cadherins
Length = 553
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 339 GAIPILVNLLRGENDEVREKVSGAIAQLSYNEADRVALADAGAVPIMIELLHDESEELRD 398
IP+ V LL + ++ +G + +L+ ++ A+ GA ++ELLH +E
Sbjct: 461 NTIPLFVQLLYSSVENIQRVAAGVLCELAQDKEAADAIDAEGASAPLMELLHSRNEGTAT 520
Query: 399 NAAESLINFSED--PLQHERIS 418
AA L SED P +R+S
Sbjct: 521 YAAAVLFRISEDKNPDYRKRVS 542
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 10/111 (9%)
Query: 353 DEVREKVSGAIAQLSYNEADRVALADAGAVPIMIELLHDESEELRDNAAESLINFSEDPL 412
+E+ E +GA+ L+ + +R+ + +P+ ++LL+ E ++ AA L ++D
Sbjct: 434 EEIVEGCTGALHILARDPMNRMEIFRLNTIPLFVQLLYSSVENIQRVAAGVLCELAQDKE 493
Query: 413 QHERI-SEAIGIPSFQSMQSR---------LTRIRASDDLMARSMRRMSIE 453
+ I +E P + + SR R S+D +R+S+E
Sbjct: 494 AADAIDAEGASAPLMELLHSRNEGTATYAAAVLFRISEDKNPDYRKRVSVE 544
>pdb|2Z6G|A Chain A, Crystal Structure Of A Full-Length Zebrafish Beta-Catenin
Length = 780
Score = 35.0 bits (79), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 330 HSVPVIRNSGAIPILVNLLRGENDEVREKVSGAIAQLSYNEADRVALADAGAVPIMIELL 389
H+ VIR IP+ V LL + ++ +G + +L+ ++ A+ GA + ELL
Sbjct: 584 HNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELL 643
Query: 390 HDESEELRDNAAESLINFSEDPLQ 413
H +E + AA L SED Q
Sbjct: 644 HSRNEGVATYAAAVLFRMSEDKPQ 667
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 22/98 (22%)
Query: 335 IRNSGAIPILVNLL-RGEND---------------------EVREKVSGAIAQLSYNEAD 372
+R GAIP LV LL R D E+ E +GA+ L+ + +
Sbjct: 526 LREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEACTGALHILARDIHN 585
Query: 373 RVALADAGAVPIMIELLHDESEELRDNAAESLINFSED 410
R+ + +P+ ++LL+ E ++ AA L ++D
Sbjct: 586 RIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQD 623
Score = 28.1 bits (61), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 340 AIPILVNLLRGENDEVREKVSGAIAQLSYNEADRVALADAGAVPIMIELLHDESEELRDN 399
AIP L LL E+ V K + + QLS EA R A+ + P M+ + + D
Sbjct: 151 AIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRS---PQMVSAIVRTMQNTNDV 207
Query: 400 AAESLINFSEDPLQHER-----ISEAIGIPSFQSM 429
+ + L H R I ++ GIP+ +M
Sbjct: 208 ETARCTSGTLHNLSHHREGLLAIFKSGGIPALVNM 242
>pdb|3BCT|A Chain A, The Armadillo Repeat Region From Murine Beta-Catenin
Length = 470
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 22/98 (22%)
Query: 335 IRNSGAIPILVNLL-RGEND---------------------EVREKVSGAIAQLSYNEAD 372
+R GAIP LV LL R D E+ E +GA+ L+ + +
Sbjct: 335 LREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRXEEIVEGCTGALHILARDVHN 394
Query: 373 RVALADAGAVPIMIELLHDESEELRDNAAESLINFSED 410
R+ + +P+ ++LL+ E ++ AA L ++D
Sbjct: 395 RIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQD 432
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%)
Query: 330 HSVPVIRNSGAIPILVNLLRGENDEVREKVSGAIAQLSYNEADRVALADAGAVPIMIELL 389
H+ VIR IP+ V LL + ++ +G + +L+ ++ A+ GA + ELL
Sbjct: 393 HNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELL 452
Query: 390 HDESEELRDNAAESLI 405
H +E + AA L
Sbjct: 453 HSRNEGVATYAAAVLF 468
>pdb|3TJ3|A Chain A, Structure Of Importin A5 Bound To The N-Terminus Of Nup50
pdb|3TJ3|B Chain B, Structure Of Importin A5 Bound To The N-Terminus Of Nup50
Length = 447
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 334 VIRNSGAIPILVNLL-RGENDEVREKVSGAIAQL-SYNEADRVALADAGAVPIMIELLHD 391
VI G + V L R EN ++ + + + + S N + AGAVPI IELL
Sbjct: 56 VISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSS 115
Query: 392 ESEELRDNAAESLINFSEDP-LQHERISEAIGIPSFQ---SMQSRLTRIR 437
E E++++ A +L N + D + + + + +P S Q+RLT R
Sbjct: 116 EFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMTR 165
>pdb|2JDQ|A Chain A, C-Terminal Domain Of Influenza A Virus Polymerase Pb2
Subunit In Complex With Human Importin Alpha5
pdb|2JDQ|B Chain B, C-Terminal Domain Of Influenza A Virus Polymerase Pb2
Subunit In Complex With Human Importin Alpha5
Length = 450
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 334 VIRNSGAIPILVNLL-RGENDEVREKVSGAIAQL-SYNEADRVALADAGAVPIMIELLHD 391
VI G + V L R EN ++ + + + + S N + AGAVPI IELL
Sbjct: 59 VISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSS 118
Query: 392 ESEELRDNAAESLINFSEDP-LQHERISEAIGIPSFQ---SMQSRLTRIR 437
E E++++ A +L N + D + + + + +P S Q+RLT R
Sbjct: 119 EFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMTR 168
>pdb|1LUJ|A Chain A, Crystal Structure Of The Beta-CateninICAT COMPLEX
Length = 514
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 22/98 (22%)
Query: 335 IRNSGAIPILVNLL-RGEND---------------------EVREKVSGAIAQLSYNEAD 372
+R GAIP LV LL R D E+ E +GA+ L+ + +
Sbjct: 378 LREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHN 437
Query: 373 RVALADAGAVPIMIELLHDESEELRDNAAESLINFSED 410
R+ + +P+ ++LL+ E ++ AA L ++D
Sbjct: 438 RIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQD 475
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%)
Query: 330 HSVPVIRNSGAIPILVNLLRGENDEVREKVSGAIAQLSYNEADRVALADAGAVPIMIELL 389
H+ VIR IP+ V LL + ++ +G + +L+ ++ A+ GA + ELL
Sbjct: 436 HNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELL 495
Query: 390 HDESEELRDNAAESLINFS 408
H +E + AA L S
Sbjct: 496 HSRNEGVATYAAAVLFRMS 514
>pdb|1JDH|A Chain A, Crystal Structure Of Beta-Catenin And Htcf-4
Length = 529
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 22/98 (22%)
Query: 335 IRNSGAIPILVNLL-RGEND---------------------EVREKVSGAIAQLSYNEAD 372
+R GAIP LV LL R D E+ E +GA+ L+ + +
Sbjct: 393 LREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHN 452
Query: 373 RVALADAGAVPIMIELLHDESEELRDNAAESLINFSED 410
R+ + +P+ ++LL+ E ++ AA L ++D
Sbjct: 453 RIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQD 490
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%)
Query: 330 HSVPVIRNSGAIPILVNLLRGENDEVREKVSGAIAQLSYNEADRVALADAGAVPIMIELL 389
H+ VIR IP+ V LL + ++ +G + +L+ ++ A+ GA + ELL
Sbjct: 451 HNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELL 510
Query: 390 HDESEELRDNAAESLINFS 408
H +E + AA L S
Sbjct: 511 HSRNEGVATYAAAVLFRMS 529
>pdb|1T08|A Chain A, Crystal Structure Of Beta-CateninICAT HELICAL
DomainUNPHOSPHORYLATED APC R3
Length = 519
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 22/98 (22%)
Query: 335 IRNSGAIPILVNLL-RGEND---------------------EVREKVSGAIAQLSYNEAD 372
+R GAIP LV LL R D E+ E +GA+ L+ + +
Sbjct: 382 LREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHN 441
Query: 373 RVALADAGAVPIMIELLHDESEELRDNAAESLINFSED 410
R+ + +P+ ++LL+ E ++ AA L ++D
Sbjct: 442 RIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQD 479
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%)
Query: 330 HSVPVIRNSGAIPILVNLLRGENDEVREKVSGAIAQLSYNEADRVALADAGAVPIMIELL 389
H+ VIR IP+ V LL + ++ +G + +L+ ++ A+ GA + ELL
Sbjct: 440 HNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELL 499
Query: 390 HDESEELRDNAAESLINFSE 409
H +E + AA L SE
Sbjct: 500 HSRNEGVATYAAAVLFRMSE 519
>pdb|3TX7|A Chain A, Crystal Structure Of Lrh-1BETA-Catenin Complex
Length = 527
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 22/98 (22%)
Query: 335 IRNSGAIPILVNLL-RGEND---------------------EVREKVSGAIAQLSYNEAD 372
+R GAIP LV LL R D E+ E +GA+ L+ + +
Sbjct: 391 LREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHN 450
Query: 373 RVALADAGAVPIMIELLHDESEELRDNAAESLINFSED 410
R+ + +P+ ++LL+ E ++ AA L ++D
Sbjct: 451 RIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQD 488
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%)
Query: 330 HSVPVIRNSGAIPILVNLLRGENDEVREKVSGAIAQLSYNEADRVALADAGAVPIMIELL 389
H+ VIR IP+ V LL + ++ +G + +L+ ++ A+ GA + ELL
Sbjct: 449 HNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELL 508
Query: 390 HDESEELRDNAAESLINFS 408
H +E + AA L S
Sbjct: 509 HSRNEGVATYAAAVLFRMS 527
>pdb|1G3J|A Chain A, Crystal Structure Of The Xtcf3-CbdBETA-Catenin Armadillo
Repeat Complex
pdb|1G3J|C Chain C, Crystal Structure Of The Xtcf3-CbdBETA-Catenin Armadillo
Repeat Complex
pdb|1TH1|A Chain A, Beta-Catenin In Complex With A Phosphorylated Apc 20aa
Repeat Fragment
pdb|1TH1|B Chain B, Beta-Catenin In Complex With A Phosphorylated Apc 20aa
Repeat Fragment
Length = 532
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 22/98 (22%)
Query: 335 IRNSGAIPILVNLL-RGEND---------------------EVREKVSGAIAQLSYNEAD 372
+R GAIP LV LL R D E+ E +GA+ L+ + +
Sbjct: 395 LREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHN 454
Query: 373 RVALADAGAVPIMIELLHDESEELRDNAAESLINFSED 410
R+ + +P+ ++LL+ E ++ AA L ++D
Sbjct: 455 RIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQD 492
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%)
Query: 330 HSVPVIRNSGAIPILVNLLRGENDEVREKVSGAIAQLSYNEADRVALADAGAVPIMIELL 389
H+ VIR IP+ V LL + ++ +G + +L+ ++ A+ GA + ELL
Sbjct: 453 HNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELL 512
Query: 390 HDESEELRDNAAESLINFSE 409
H +E + AA L SE
Sbjct: 513 HSRNEGVATYAAAVLFRMSE 532
>pdb|3L6X|A Chain A, Crystal Structure Of P120 Catenin In Complex With
E-Cadherin
pdb|3L6Y|A Chain A, Crystal Structure Of P120 Catenin In Complex With
E-cadherin
pdb|3L6Y|C Chain C, Crystal Structure Of P120 Catenin In Complex With
E-cadherin
pdb|3L6Y|E Chain E, Crystal Structure Of P120 Catenin In Complex With
E-cadherin
Length = 584
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 335 IRNSGAIPILVNLLRGENDEVREKVSGAIAQLSY--NEADRVALADAGAVPIMIELL 389
+R IP+LV LL EV GA+ +S+ ++ +++A+ + VP ++ LL
Sbjct: 86 VRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLL 142
>pdb|3AU3|A Chain A, Crystal Structure Of Armadillo Repeat Domain Of Apc
Length = 344
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 334 VIRNSGAIPILVNLLRGENDEVREKVSGAIAQLS-YNEADRVALADAGAVPIMIELLHDE 392
++R + + L+ L+ + + G + LS N D+ AL D GAV + L+H +
Sbjct: 267 ILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDXGAVSXLKNLIHSK 326
Query: 393 SEELRDNAAESLINF 407
+ + +A +L N
Sbjct: 327 HKXIAXGSAAALRNL 341
>pdb|3NMW|A Chain A, Crytal Structure Of Armadillo Repeats Domain Of Apc
pdb|3NMW|B Chain B, Crytal Structure Of Armadillo Repeats Domain Of Apc
Length = 354
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 334 VIRNSGAIPILVNLLRGENDEVREKVSGAIAQLS-YNEADRVALADAGAVPIMIELLHDE 392
++R + + L+ L+ + + G + LS N D+ AL D GAV + L+H +
Sbjct: 258 ILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDXGAVSXLKNLIHSK 317
Query: 393 SEELRDNAAESLINF 407
+ + +A +L N
Sbjct: 318 HKXIAXGSAAALRNL 332
>pdb|3NMX|A Chain A, Crystal Structure Of Apc Complexed With Asef
pdb|3NMX|B Chain B, Crystal Structure Of Apc Complexed With Asef
pdb|3NMX|C Chain C, Crystal Structure Of Apc Complexed With Asef
Length = 354
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 334 VIRNSGAIPILVNLLRGENDEVREKVSGAIAQLS-YNEADRVALADAGAVPIMIELLHDE 392
++R + + L+ L+ + + G + LS N D+ AL D GAV ++ L+H +
Sbjct: 258 ILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSK 317
Query: 393 SEELRDNAAESLINF 407
+ + +A +L N
Sbjct: 318 HKMIAMGSAAALRNL 332
>pdb|3NMZ|A Chain A, Crytal Structure Of Apc Complexed With Asef
pdb|3NMZ|B Chain B, Crytal Structure Of Apc Complexed With Asef
Length = 458
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 334 VIRNSGAIPILVNLLRGENDEVREKVSGAIAQLS-YNEADRVALADAGAVPIMIELLHDE 392
++R + + L+ L+ + + G + LS N D+ AL D GAV ++ L+H +
Sbjct: 374 ILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSK 433
Query: 393 SEELRDNAAESLINF 407
+ + +A +L N
Sbjct: 434 HKMIAMGSAAALRNL 448
>pdb|3QHE|A Chain A, Crystal Structure Of The Complex Between The Armadillo
Repeat Domain Of Adenomatous Polyposis Coli And The
Tyrosine-Rich Domain Of Sam68
pdb|3QHE|C Chain C, Crystal Structure Of The Complex Between The Armadillo
Repeat Domain Of Adenomatous Polyposis Coli And The
Tyrosine-Rich Domain Of Sam68
Length = 337
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 334 VIRNSGAIPILVNLLRGENDEVREKVSGAIAQLS-YNEADRVALADAGAVPIMIELLHDE 392
++R + + L+ L+ + + G + LS N D+ AL D GAV ++ L+H +
Sbjct: 260 ILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSK 319
Query: 393 SEELRDNAAESLINF 407
+ + +A +L N
Sbjct: 320 HKMIAMGSAAALRNL 334
>pdb|3T7U|A Chain A, A New Crytal Structure Of Apc-Arm
pdb|3T7U|B Chain B, A New Crytal Structure Of Apc-Arm
Length = 378
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 334 VIRNSGAIPILVNLLRGENDEVREKVSGAIAQLS-YNEADRVALADAGAVPIMIELLHDE 392
++R + + L+ L+ + + G + LS N D+ AL D GAV ++ L+H +
Sbjct: 258 ILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSK 317
Query: 393 SEELRDNAAESLINF 407
+ + +A +L N
Sbjct: 318 HKMIAMGSAAALRNL 332
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 341 IPILVNLLRGENDEVREKVSGAIAQLSYNEADRVALADAGAVPIMIELLHDESEELRDNA 400
+P+L+ + G N SG++ L N +AL A LH + ++A
Sbjct: 353 VPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGHDFAVSESA 412
Query: 401 AESLINFSEDPLQHERIS 418
+ S N+ +DP+ + +S
Sbjct: 413 SNSTSNY-DDPIWRDVVS 429
>pdb|3FEX|C Chain C, Crystal Structure Of The Cbc-Importin Alpha Complex.
pdb|3FEY|C Chain C, Crystal Structure Of The Cbc-Importin Alpha Complex
Length = 467
Score = 28.5 bits (62), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 334 VIRNSGAIPILVNLL-RGENDEVREKVSGAIAQLSYNEADRV-ALADAGAVPIMIELLHD 391
+IR +G IP V+ L R + ++ + + A+ ++ +++ A+ D GA+P I LL
Sbjct: 47 IIR-AGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLAS 105
Query: 392 ESEELRDNAAESLINFSED 410
+ + A +L N + D
Sbjct: 106 PHAHISEQAVWALGNIAGD 124
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,263,754
Number of Sequences: 62578
Number of extensions: 395811
Number of successful extensions: 1149
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 986
Number of HSP's gapped (non-prelim): 169
length of query: 461
length of database: 14,973,337
effective HSP length: 102
effective length of query: 359
effective length of database: 8,590,381
effective search space: 3083946779
effective search space used: 3083946779
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)