BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045003
(93 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2VZV0|IF2_MAGSA Translation initiation factor IF-2 OS=Magnetospirillum magneticum
(strain AMB-1 / ATCC 700264) GN=infB PE=3 SV=1
Length = 872
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 25/30 (83%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTG 33
DALR T VV+ EAGGITQH+GA+ + MS+G
Sbjct: 391 DALRATDVVSGEAGGITQHIGAYQVTMSSG 420
>sp|Q97I51|IF2_CLOAB Translation initiation factor IF-2 OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=infB PE=3 SV=1
Length = 693
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 26/34 (76%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKF 37
DA+R++SV EAGGITQH+GA+ + M+ G + F
Sbjct: 213 DAIRKSSVTETEAGGITQHIGAYTVKMNEGKVTF 246
>sp|A7HZ93|IF2_PARL1 Translation initiation factor IF-2 OS=Parvibaculum lavamentivorans
(strain DS-1 / DSM 13023 / NCIMB 13966) GN=infB PE=3
SV=1
Length = 887
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 25/30 (83%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTG 33
DALR+T V A EAGGITQH+GA+ + +S+G
Sbjct: 405 DALRKTDVAAGEAGGITQHIGAYQVNLSSG 434
>sp|A4IW10|IF2_FRATW Translation initiation factor IF-2 OS=Francisella tularensis subsp.
tularensis (strain WY96-3418) GN=infB PE=3 SV=1
Length = 843
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKF 37
D +RQT VVA EAGGITQH+GA+ + G I F
Sbjct: 365 DYIRQTRVVAGEAGGITQHIGAYSVKTDKGSITF 398
>sp|Q5NIL7|IF2_FRATT Translation initiation factor IF-2 OS=Francisella tularensis subsp.
tularensis (strain SCHU S4 / Schu 4) GN=infB PE=3 SV=1
Length = 846
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKF 37
D +RQT VVA EAGGITQH+GA+ + G I F
Sbjct: 365 DYIRQTRVVAGEAGGITQHIGAYSVKTDKGSITF 398
>sp|Q0BK70|IF2_FRATO Translation initiation factor IF-2 OS=Francisella tularensis subsp.
holarctica (strain OSU18) GN=infB PE=3 SV=1
Length = 846
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKF 37
D +RQT VVA EAGGITQH+GA+ + G I F
Sbjct: 365 DYIRQTRVVAGEAGGITQHIGAYSVKTDKGSITF 398
>sp|A0Q8F3|IF2_FRATN Translation initiation factor IF-2 OS=Francisella tularensis subsp.
novicida (strain U112) GN=infB PE=3 SV=1
Length = 846
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKF 37
D +RQT VVA EAGGITQH+GA+ + G I F
Sbjct: 365 DYIRQTRVVAGEAGGITQHIGAYSVKTDKGSITF 398
>sp|B2SEW7|IF2_FRATM Translation initiation factor IF-2 OS=Francisella tularensis subsp.
mediasiatica (strain FSC147) GN=infB PE=3 SV=1
Length = 846
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKF 37
D +RQT VVA EAGGITQH+GA+ + G I F
Sbjct: 365 DYIRQTRVVAGEAGGITQHIGAYSVKTDKGSITF 398
>sp|Q2A1G8|IF2_FRATH Translation initiation factor IF-2 OS=Francisella tularensis subsp.
holarctica (strain LVS) GN=infB PE=3 SV=1
Length = 846
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKF 37
D +RQT VVA EAGGITQH+GA+ + G I F
Sbjct: 365 DYIRQTRVVAGEAGGITQHIGAYSVKTDKGSITF 398
>sp|A7NEI8|IF2_FRATF Translation initiation factor IF-2 OS=Francisella tularensis subsp.
holarctica (strain FTNF002-00 / FTA) GN=infB PE=3 SV=1
Length = 846
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKF 37
D +RQT VVA EAGGITQH+GA+ + G I F
Sbjct: 365 DYIRQTRVVAGEAGGITQHIGAYSVKTDKGSITF 398
>sp|Q14K20|IF2_FRAT1 Translation initiation factor IF-2 OS=Francisella tularensis subsp.
tularensis (strain FSC 198) GN=infB PE=3 SV=1
Length = 846
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKF 37
D +RQT VVA EAGGITQH+GA+ + G I F
Sbjct: 365 DYIRQTRVVAGEAGGITQHIGAYSVKTDKGSITF 398
>sp|P25038|IF2M_YEAST Translation initiation factor IF-2, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IFM1 PE=1
SV=2
Length = 676
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/38 (57%), Positives = 26/38 (68%)
Query: 2 ISDALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKFNF 39
I D LR++SVVA+E GGITQH+GAF I G K F
Sbjct: 161 IIDYLRKSSVVAQEHGGITQHIGAFQITAPKSGKKITF 198
>sp|Q1IZ02|IF2_DEIGD Translation initiation factor IF-2 OS=Deinococcus geothermalis
(strain DSM 11300) GN=infB PE=3 SV=1
Length = 601
Score = 45.8 bits (107), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/34 (64%), Positives = 24/34 (70%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKF 37
D +R+T V AKEAGGITQHVGAF S G I F
Sbjct: 124 DYIRKTKVAAKEAGGITQHVGAFEAKTSKGKIVF 157
>sp|Q9RTG5|IF2_DEIRA Translation initiation factor IF-2 OS=Deinococcus radiodurans
(strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 /
NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) GN=infB PE=3
SV=1
Length = 597
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/34 (64%), Positives = 24/34 (70%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKF 37
D +R+T V AKEAGGITQHVGAF S G I F
Sbjct: 118 DYIRKTRVAAKEAGGITQHVGAFEAKTSKGKIVF 151
>sp|C1CUQ9|IF2_DEIDV Translation initiation factor IF-2 OS=Deinococcus deserti (strain
VCD115 / DSM 17065 / LMG 22923) GN=infB PE=3 SV=1
Length = 607
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/34 (64%), Positives = 24/34 (70%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKF 37
D +R+T V AKEAGGITQHVGAF S G I F
Sbjct: 128 DYIRKTRVAAKEAGGITQHVGAFEAKTSKGKIVF 161
>sp|A4WW80|IF2_RHOS5 Translation initiation factor IF-2 OS=Rhodobacter sphaeroides
(strain ATCC 17025 / ATH 2.4.3) GN=infB PE=3 SV=1
Length = 838
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 26/32 (81%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGI 35
DA+R+TSVV+ EAGGITQH+GA+ + +G +
Sbjct: 355 DAIRKTSVVSGEAGGITQHIGAYQVKTESGAV 386
>sp|Q3IYN5|IF2_RHOS4 Translation initiation factor IF-2 OS=Rhodobacter sphaeroides
(strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
GN=infB PE=3 SV=1
Length = 836
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 26/32 (81%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGI 35
DA+R+TSVV+ EAGGITQH+GA+ + +G +
Sbjct: 353 DAIRKTSVVSGEAGGITQHIGAYQVKTESGAV 384
>sp|A3PNL2|IF2_RHOS1 Translation initiation factor IF-2 OS=Rhodobacter sphaeroides
(strain ATCC 17029 / ATH 2.4.9) GN=infB PE=3 SV=1
Length = 836
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 26/32 (81%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGI 35
DA+R+TSVV+ EAGGITQH+GA+ + +G +
Sbjct: 353 DAIRKTSVVSGEAGGITQHIGAYQVKTESGAV 384
>sp|A5FV21|IF2_ACICJ Translation initiation factor IF-2 OS=Acidiphilium cryptum (strain
JF-5) GN=infB PE=3 SV=1
Length = 887
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGG 34
DALR T V A+EAGGITQH+GA+ + + +G
Sbjct: 406 DALRSTDVAAREAGGITQHIGAYQVTLESGA 436
>sp|P46198|IF2M_BOVIN Translation initiation factor IF-2, mitochondrial OS=Bos taurus
GN=MTIF2 PE=1 SV=1
Length = 727
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTG 33
D LR+T V A EAGGITQH+GAF++ + +G
Sbjct: 198 DKLRKTQVAAMEAGGITQHIGAFLVSLPSG 227
>sp|B9M1G0|IF2_GEOSF Translation initiation factor IF-2 OS=Geobacter sp. (strain FRC-32)
GN=infB PE=3 SV=1
Length = 908
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 27/34 (79%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKF 37
DA+RQT+V+A EAGGITQH+GA+ + ++ I F
Sbjct: 428 DAIRQTNVIAGEAGGITQHIGAYDVTLNGRKITF 461
>sp|B9JYK6|IF2_AGRVS Translation initiation factor IF-2 OS=Agrobacterium vitis (strain
S4 / ATCC BAA-846) GN=infB PE=3 SV=1
Length = 926
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKF 37
DA+RQTSVV+ EAGGITQH+GA+ + + I F
Sbjct: 444 DAIRQTSVVSGEAGGITQHIGAYQVEQNGHKITF 477
>sp|A7H9F3|IF2_ANADF Translation initiation factor IF-2 OS=Anaeromyxobacter sp. (strain
Fw109-5) GN=infB PE=3 SV=1
Length = 970
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKF 37
DA+RQ V A EAGGITQH+GA+ + G I F
Sbjct: 489 DAIRQADVAAGEAGGITQHIGAYAVQTPQGPITF 522
>sp|B4UHG0|IF2_ANASK Translation initiation factor IF-2 OS=Anaeromyxobacter sp. (strain
K) GN=infB PE=3 SV=1
Length = 946
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKF 37
DA+RQ V A EAGGITQH+GA+ + G I F
Sbjct: 465 DAIRQADVAAGEAGGITQHIGAYSVNTPQGPITF 498
>sp|Q2IPZ7|IF2_ANADE Translation initiation factor IF-2 OS=Anaeromyxobacter dehalogenans
(strain 2CP-C) GN=infB PE=3 SV=1
Length = 950
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKF 37
DA+RQ V A EAGGITQH+GA+ + G I F
Sbjct: 469 DAIRQADVAAGEAGGITQHIGAYSVNTPQGPITF 502
>sp|B8JFY6|IF2_ANAD2 Translation initiation factor IF-2 OS=Anaeromyxobacter dehalogenans
(strain 2CP-1 / ATCC BAA-258) GN=infB PE=3 SV=1
Length = 951
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKF 37
DA+RQ V A EAGGITQH+GA+ + G I F
Sbjct: 470 DAIRQADVAAGEAGGITQHIGAYSVNTPQGPITF 503
>sp|B0TWR3|IF2_FRAP2 Translation initiation factor IF-2 OS=Francisella philomiragia
subsp. philomiragia (strain ATCC 25017) GN=infB PE=3
SV=1
Length = 844
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKF 37
D +R+ VVA EAGGITQH+GA+ + S G I F
Sbjct: 363 DYIRKARVVAGEAGGITQHIGAYSVKTSKGAITF 396
>sp|A0LHL8|IF2_SYNFM Translation initiation factor IF-2 OS=Syntrophobacter fumaroxidans
(strain DSM 10017 / MPOB) GN=infB PE=3 SV=1
Length = 962
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKF 37
DA+R T+V+ EAGGITQH+GA+ + + G + F
Sbjct: 475 DAIRDTNVIGGEAGGITQHIGAYYVMLPNGNVVF 508
>sp|A1B587|IF2_PARDP Translation initiation factor IF-2 OS=Paracoccus denitrificans
(strain Pd 1222) GN=infB PE=3 SV=1
Length = 848
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGI 35
DA+R +VVA EAGGITQH+GA+ + S G +
Sbjct: 366 DAIRHANVVAGEAGGITQHIGAYQVKASNGAV 397
>sp|C0QTL9|IF2_PERMH Translation initiation factor IF-2 OS=Persephonella marina (strain
DSM 14350 / EX-H1) GN=infB PE=3 SV=1
Length = 875
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTG 33
D +R+T V AKE GGITQH+GA+ I +S G
Sbjct: 399 DTIRKTDVAAKEKGGITQHIGAYKIKLSNG 428
>sp|A3DE44|IF2_CLOTH Translation initiation factor IF-2 OS=Clostridium thermocellum
(strain ATCC 27405 / DSM 1237) GN=infB PE=3 SV=1
Length = 1035
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 27/34 (79%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKF 37
DA+++T+V KEAGGITQH+GA+++ ++ I F
Sbjct: 557 DAIKKTNVTEKEAGGITQHIGAYMVKINNRNITF 590
>sp|Q91YJ5|IF2M_MOUSE Translation initiation factor IF-2, mitochondrial OS=Mus musculus
GN=Mtif2 PE=1 SV=2
Length = 727
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTG 33
D LR+T V A E GGITQH+GAF++ + +G
Sbjct: 198 DKLRETQVAAMEVGGITQHIGAFLVSLPSG 227
>sp|B1VYN5|IF2_STRGG Translation initiation factor IF-2 OS=Streptomyces griseus subsp.
griseus (strain JCM 4626 / NBRC 13350) GN=infB PE=3 SV=1
Length = 1038
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGG 34
DA+R+T+VVA EAGGITQH+GA+ + G
Sbjct: 551 DAIRKTNVVAGEAGGITQHIGAYQVSSEVNG 581
>sp|Q13EL8|IF2_RHOPS Translation initiation factor IF-2 OS=Rhodopseudomonas palustris
(strain BisB5) GN=infB PE=3 SV=1
Length = 883
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKFNF 39
DALR +VV+ EAGGITQH+GA+ + G K F
Sbjct: 400 DALRHANVVSGEAGGITQHIGAYQVTSPETGTKITF 435
>sp|A9HF18|IF2_GLUDA Translation initiation factor IF-2 OS=Gluconacetobacter
diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5)
GN=infB PE=3 SV=1
Length = 907
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTG 33
DALR T V A EAGGITQH+GA+ + + +G
Sbjct: 426 DALRTTDVAAAEAGGITQHIGAYQVTLPSG 455
>sp|A4YJE9|IF2_BRASO Translation initiation factor IF-2 OS=Bradyrhizobium sp. (strain
ORS278) GN=infB PE=3 SV=1
Length = 921
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKFNF 39
DALR +VV+ EAGGITQH+GA+ + G K F
Sbjct: 437 DALRHANVVSGEAGGITQHIGAYQVTAPDSGKKITF 472
>sp|A5E866|IF2_BRASB Translation initiation factor IF-2 OS=Bradyrhizobium sp. (strain
BTAi1 / ATCC BAA-1182) GN=infB PE=3 SV=1
Length = 921
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKFNF 39
DALR +VV+ EAGGITQH+GA+ + G K F
Sbjct: 437 DALRHANVVSGEAGGITQHIGAYQVTAPDSGKKITF 472
>sp|A6W7Z2|IF2_KINRD Translation initiation factor IF-2 OS=Kineococcus radiotolerans
(strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=infB
PE=3 SV=1
Length = 1044
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIK 36
DA+R + VVAKEAGGITQH+GA+ + GI+
Sbjct: 557 DAIRSSDVVAKEAGGITQHIGAYQVVKEHEGIE 589
>sp|Q6AJY4|IF2_DESPS Translation initiation factor IF-2 OS=Desulfotalea psychrophila
(strain LSv54 / DSM 12343) GN=infB PE=3 SV=1
Length = 939
Score = 43.1 bits (100), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 2 ISDALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKF 37
I DA+R+T V EAGGITQH+GA+ + ++G + F
Sbjct: 455 ILDAIRKTDVADGEAGGITQHIGAYHVKAASGDVTF 490
>sp|Q21C31|IF2_RHOPB Translation initiation factor IF-2 OS=Rhodopseudomonas palustris
(strain BisB18) GN=infB PE=3 SV=1
Length = 880
Score = 43.1 bits (100), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKFNF 39
DALR +VV+ EAGGITQH+GA+ + G K F
Sbjct: 396 DALRHANVVSGEAGGITQHIGAYQVTSPESGKKITF 431
>sp|Q6NCN5|IF2_RHOPA Translation initiation factor IF-2 OS=Rhodopseudomonas palustris
(strain ATCC BAA-98 / CGA009) GN=infB PE=3 SV=1
Length = 883
Score = 43.1 bits (100), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKFNF 39
DALR +VV+ EAGGITQH+GA+ + G K F
Sbjct: 399 DALRHANVVSGEAGGITQHIGAYQVTSPESGKKITF 434
>sp|Q07V78|IF2_RHOP5 Translation initiation factor IF-2 OS=Rhodopseudomonas palustris
(strain BisA53) GN=infB PE=3 SV=1
Length = 893
Score = 43.1 bits (100), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKFNF 39
DALR +VV+ EAGGITQH+GA+ + G K F
Sbjct: 409 DALRHANVVSGEAGGITQHIGAYQVTSPESGKKITF 444
>sp|Q2J2J9|IF2_RHOP2 Translation initiation factor IF-2 OS=Rhodopseudomonas palustris
(strain HaA2) GN=infB PE=3 SV=1
Length = 886
Score = 43.1 bits (100), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKFNF 39
DALR +VV+ EAGGITQH+GA+ + G K F
Sbjct: 403 DALRHANVVSGEAGGITQHIGAYQVTSPESGKKITF 438
>sp|Q3SWP9|IF2_NITWN Translation initiation factor IF-2 OS=Nitrobacter winogradskyi
(strain Nb-255 / ATCC 25391) GN=infB PE=3 SV=1
Length = 871
Score = 43.1 bits (100), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKFNF 39
DALR +VV+ EAGGITQH+GA+ + G K F
Sbjct: 387 DALRHANVVSGEAGGITQHIGAYQVTSPESGKKITF 422
>sp|Q2RJM5|IF2_MOOTA Translation initiation factor IF-2 OS=Moorella thermoacetica
(strain ATCC 39073) GN=infB PE=3 SV=1
Length = 903
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKF 37
DA+R+T+V A EAGGITQH+GA+ + + I F
Sbjct: 423 DAIRRTNVTASEAGGITQHIGAYQVRLKNRKITF 456
>sp|Q3AB98|IF2_CARHZ Translation initiation factor IF-2 OS=Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008) GN=infB PE=3
SV=1
Length = 827
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKF 37
DA+RQT+V A EAGGITQH+GA+ + + I F
Sbjct: 346 DAIRQTNVTATEAGGITQHIGAYQVEHNGRKITF 379
>sp|Q1DAM6|IF2_MYXXD Translation initiation factor IF-2 OS=Myxococcus xanthus (strain DK
1622) GN=infB PE=3 SV=1
Length = 1072
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKF 37
DA+R+ SV EAGGITQH+GA+ I + G + F
Sbjct: 590 DAIRKASVAQGEAGGITQHIGAYSITTARGDVTF 623
>sp|Q5FQM3|IF2_GLUOX Translation initiation factor IF-2 OS=Gluconobacter oxydans (strain
621H) GN=infB PE=3 SV=1
Length = 917
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTG 33
DALR T V A EAGGITQH+GA+ I +G
Sbjct: 436 DALRTTDVAASEAGGITQHIGAYQITAPSG 465
>sp|Q1MQY8|IF2_LAWIP Translation initiation factor IF-2 OS=Lawsonia intracellularis
(strain PHE/MN1-00) GN=infB PE=3 SV=1
Length = 961
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKF 37
DA+R+T+V EAGGITQH+GA+ + +G I F
Sbjct: 480 DAIRKTNVTGGEAGGITQHIGAYHVTTKSGEIVF 513
>sp|Q30WJ0|IF2_DESDG Translation initiation factor IF-2 OS=Desulfovibrio desulfuricans
(strain G20) GN=infB PE=3 SV=1
Length = 984
Score = 42.7 bits (99), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 4 DALRQTSVVAKEAGGITQHVGAFVIGMSTGGIKF 37
DA+R++SV EAGGITQH+GA+ + G I F
Sbjct: 502 DAIRKSSVTTGEAGGITQHIGAYHVSTKRGDIVF 535
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.141 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,510,591
Number of Sequences: 539616
Number of extensions: 1053510
Number of successful extensions: 3217
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2410
Number of HSP's gapped (non-prelim): 808
length of query: 93
length of database: 191,569,459
effective HSP length: 63
effective length of query: 30
effective length of database: 157,573,651
effective search space: 4727209530
effective search space used: 4727209530
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)