Query 045017
Match_columns 82
No_of_seqs 125 out of 1366
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 15:45:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045017.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045017hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ctr_A DNAJ homolog subfamily 99.6 1.2E-15 4.2E-20 92.0 5.2 37 7-43 4-40 (88)
2 2o37_A Protein SIS1; HSP40, J- 99.6 6.5E-16 2.2E-20 94.0 3.6 47 7-53 5-73 (92)
3 2dmx_A DNAJ homolog subfamily 99.6 3.2E-15 1.1E-19 90.6 5.4 37 7-43 6-42 (92)
4 2cug_A Mkiaa0962 protein; DNAJ 99.6 4.4E-15 1.5E-19 89.5 5.4 38 6-43 13-50 (88)
5 2dn9_A DNAJ homolog subfamily 99.6 3.6E-15 1.2E-19 87.9 4.8 38 6-43 3-40 (79)
6 2yua_A Williams-beuren syndrom 99.6 2.2E-15 7.6E-20 92.6 3.8 37 7-43 14-50 (99)
7 2ctp_A DNAJ homolog subfamily 99.5 3.3E-15 1.1E-19 88.0 4.0 37 7-43 4-40 (78)
8 1hdj_A Human HSP40, HDJ-1; mol 99.5 5.5E-15 1.9E-19 86.9 4.8 35 9-43 2-36 (77)
9 2och_A Hypothetical protein DN 99.5 4.5E-15 1.5E-19 86.6 4.0 37 7-43 5-41 (73)
10 2ej7_A HCG3 gene; HCG3 protein 99.5 6.1E-15 2.1E-19 87.5 4.4 37 7-43 6-42 (82)
11 1wjz_A 1700030A21RIK protein; 99.5 3.4E-15 1.2E-19 90.5 3.0 37 7-43 13-49 (94)
12 2lgw_A DNAJ homolog subfamily 99.5 9.2E-15 3.1E-19 90.3 3.7 34 10-43 2-35 (99)
13 2ys8_A RAB-related GTP-binding 99.5 1.5E-14 5E-19 87.8 4.3 46 8-53 25-82 (90)
14 2ctw_A DNAJ homolog subfamily 99.5 2.4E-14 8E-19 89.5 4.9 39 5-43 12-50 (109)
15 2ctq_A DNAJ homolog subfamily 99.5 1.6E-14 5.5E-19 90.6 3.9 36 8-43 18-53 (112)
16 1bq0_A DNAJ, HSP40; chaperone, 99.5 2E-14 6.7E-19 88.9 3.8 35 9-43 2-36 (103)
17 1iur_A KIAA0730 protein; DNAJ 99.4 6.8E-14 2.3E-18 85.0 3.8 37 7-43 13-49 (88)
18 2qsa_A DNAJ homolog DNJ-2; J-d 99.4 6.5E-14 2.2E-18 87.2 3.2 38 6-43 11-49 (109)
19 2l6l_A DNAJ homolog subfamily 99.4 1.7E-13 6E-18 89.7 3.9 38 6-43 6-43 (155)
20 3apq_A DNAJ homolog subfamily 99.4 2E-13 6.7E-18 91.3 4.1 34 10-43 2-35 (210)
21 2guz_A Mitochondrial import in 99.4 3.1E-13 1.1E-17 78.8 2.9 37 7-43 11-48 (71)
22 2qwo_B Putative tyrosine-prote 99.3 2.5E-13 8.6E-18 83.3 1.5 34 10-43 33-66 (92)
23 1faf_A Large T antigen; J doma 99.3 3.6E-13 1.2E-17 80.1 2.1 43 10-52 11-64 (79)
24 2pf4_E Small T antigen; PP2A, 99.3 3.3E-13 1.1E-17 91.0 -0.1 35 9-43 10-46 (174)
25 3hho_A CO-chaperone protein HS 99.3 1.6E-12 5.6E-17 87.0 3.1 35 9-43 3-39 (174)
26 1gh6_A Large T antigen; tumor 99.3 1E-12 3.5E-17 83.1 1.8 45 9-53 7-62 (114)
27 3lz8_A Putative chaperone DNAJ 99.3 4.5E-13 1.5E-17 97.4 0.0 36 8-43 26-61 (329)
28 3ag7_A Putative uncharacterize 99.3 1.4E-12 4.8E-17 81.5 2.1 35 8-43 39-73 (106)
29 1fpo_A HSC20, chaperone protei 99.2 1.9E-12 6.6E-17 86.5 2.5 33 11-43 2-36 (171)
30 3bvo_A CO-chaperone protein HS 99.2 5.6E-12 1.9E-16 86.6 3.8 36 8-43 41-78 (207)
31 1n4c_A Auxilin; four helix bun 99.1 1.2E-11 4.2E-16 83.8 2.6 34 10-43 117-150 (182)
32 3uo3_A J-type CO-chaperone JAC 99.1 6.3E-11 2.2E-15 79.9 4.9 45 7-51 8-81 (181)
33 3apo_A DNAJ homolog subfamily 99.1 9E-12 3.1E-16 96.4 0.9 37 7-43 18-54 (780)
34 2guz_B Mitochondrial import in 98.6 9.5E-09 3.2E-13 59.2 1.6 34 10-43 4-40 (65)
35 2y4t_A DNAJ homolog subfamily 97.7 1.2E-05 4.3E-10 56.0 2.2 34 10-43 382-415 (450)
36 2pzi_A Probable serine/threoni 91.5 0.063 2.2E-06 40.9 1.4 35 9-43 628-664 (681)
37 1qqr_A Streptokinase domain B; 52.3 9.4 0.00032 24.4 2.3 32 12-43 34-65 (138)
38 1vq8_S 50S ribosomal protein L 36.3 31 0.0011 20.0 2.7 20 15-34 26-45 (85)
39 3r8s_T 50S ribosomal protein L 34.5 33 0.0011 20.2 2.7 20 15-34 31-50 (93)
40 2zjr_Q 50S ribosomal protein L 33.8 34 0.0012 20.2 2.7 20 15-34 26-45 (95)
41 3tve_T 50S ribosomal protein L 32.1 39 0.0013 19.8 2.7 20 15-34 25-44 (92)
42 3j21_T 50S ribosomal protein L 32.0 40 0.0014 19.6 2.7 20 15-34 27-46 (86)
43 2lxi_A RNA-binding protein 10; 30.1 40 0.0014 18.6 2.5 21 15-35 6-26 (91)
44 2pk2_A Cyclin-T1, protein TAT; 24.6 1.5E+02 0.005 21.0 5.1 30 10-41 219-248 (358)
45 1iqt_A AUF1, heterogeneous nuc 22.6 70 0.0024 16.3 2.5 20 15-34 4-23 (75)
46 3kp1_E D-ornithine aminomutase 20.4 98 0.0034 19.2 3.1 19 20-38 15-33 (121)
47 2kfv_A FK506-binding protein 3 20.2 62 0.0021 19.1 2.0 18 18-35 69-86 (92)
No 1
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=1.2e-15 Score=91.96 Aligned_cols=37 Identities=41% Similarity=0.673 Sum_probs=35.1
Q ss_pred CCccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 7 GTGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 7 ~~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
....|||+||||+++++.++||++|++|++++|||++
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~ 40 (88)
T 2ctr_A 4 GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKN 40 (88)
T ss_dssp CCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTC
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 4568999999999999999999999999999999997
No 2
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.59 E-value=6.5e-16 Score=93.96 Aligned_cols=47 Identities=34% Similarity=0.518 Sum_probs=42.9
Q ss_pred CCccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc----------------------hHHHhhhccc
Q 045017 7 GTGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV----------------------GAVYDMTLVS 53 (82)
Q Consensus 7 ~~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~----------------------r~~yD~~~~~ 53 (82)
....|||+||||+++++.++||++|++|++++|||++ |+.||..+..
T Consensus 5 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~ 73 (92)
T 2o37_A 5 VKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKREIYDQYGLE 73 (92)
T ss_dssp CSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCHHHHHHHHHHHHHHTSHHHHHHHHHHCHH
T ss_pred ccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHCCHHHHHHHHHHCHH
Confidence 3568999999999999999999999999999999998 8899987754
No 3
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=3.2e-15 Score=90.59 Aligned_cols=37 Identities=41% Similarity=0.555 Sum_probs=34.7
Q ss_pred CCccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 7 GTGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 7 ~~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
....|||+||||+++++.++||++|++|++++|||++
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~ 42 (92)
T 2dmx_A 6 SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKN 42 (92)
T ss_dssp CCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTC
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCC
Confidence 3457999999999999999999999999999999997
No 4
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.56 E-value=4.4e-15 Score=89.52 Aligned_cols=38 Identities=37% Similarity=0.503 Sum_probs=35.5
Q ss_pred CCCccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 6 PGTGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 6 ~~~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.....|||+||||+++++.++||++|+++++++|||++
T Consensus 13 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~ 50 (88)
T 2cug_A 13 SALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKN 50 (88)
T ss_dssp CSSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTC
T ss_pred ccCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 34568999999999999999999999999999999997
No 5
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.56 E-value=3.6e-15 Score=87.94 Aligned_cols=38 Identities=45% Similarity=0.702 Sum_probs=35.5
Q ss_pred CCCccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 6 PGTGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 6 ~~~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.....|||+||||+++++.++||++|++|++++|||++
T Consensus 3 ~~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~ 40 (79)
T 2dn9_A 3 SGSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTN 40 (79)
T ss_dssp SSCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTC
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 34568999999999999999999999999999999987
No 6
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=2.2e-15 Score=92.65 Aligned_cols=37 Identities=38% Similarity=0.508 Sum_probs=35.1
Q ss_pred CCccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 7 GTGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 7 ~~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
....|||+||||+++++.++||++|++|++++|||++
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~ 50 (99)
T 2yua_A 14 YSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRN 50 (99)
T ss_dssp SCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTC
T ss_pred CCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 4568999999999999999999999999999999998
No 7
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=3.3e-15 Score=88.02 Aligned_cols=37 Identities=41% Similarity=0.657 Sum_probs=35.2
Q ss_pred CCccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 7 GTGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 7 ~~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
....|||+||||+++++.++||++|+++++++|||++
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~ 40 (78)
T 2ctp_A 4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKN 40 (78)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTC
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 4568999999999999999999999999999999997
No 8
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.54 E-value=5.5e-15 Score=86.88 Aligned_cols=35 Identities=46% Similarity=0.562 Sum_probs=33.5
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..|||+||||+++++.++||++|+++++++|||++
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~ 36 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKN 36 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 36999999999999999999999999999999997
No 9
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.54 E-value=4.5e-15 Score=86.58 Aligned_cols=37 Identities=38% Similarity=0.563 Sum_probs=34.5
Q ss_pred CCccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 7 GTGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 7 ~~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
....|||+||||+++++.++||++|+++++++|||++
T Consensus 5 ~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~ 41 (73)
T 2och_A 5 VKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKN 41 (73)
T ss_dssp -CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTC
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 3458999999999999999999999999999999997
No 10
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.53 E-value=6.1e-15 Score=87.48 Aligned_cols=37 Identities=41% Similarity=0.465 Sum_probs=35.0
Q ss_pred CCccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 7 GTGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 7 ~~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
....|||+||||+++++.++||++|+++++++|||++
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~ 42 (82)
T 2ej7_A 6 SGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKN 42 (82)
T ss_dssp SSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTC
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 4568999999999999999999999999999999997
No 11
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.53 E-value=3.4e-15 Score=90.51 Aligned_cols=37 Identities=30% Similarity=0.578 Sum_probs=34.7
Q ss_pred CCccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 7 GTGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 7 ~~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
....|||+||||+++++.++||++|++|++++|||++
T Consensus 13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~ 49 (94)
T 1wjz_A 13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQ 49 (94)
T ss_dssp SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTC
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 4568999999999999999999999999999999993
No 12
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.50 E-value=9.2e-15 Score=90.26 Aligned_cols=34 Identities=41% Similarity=0.576 Sum_probs=33.1
Q ss_pred cCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 10 GSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 10 ~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.|||+||||+++++.++||++|+++++++|||++
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~ 35 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKN 35 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 5899999999999999999999999999999998
No 13
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=1.5e-14 Score=87.78 Aligned_cols=46 Identities=28% Similarity=0.400 Sum_probs=40.6
Q ss_pred CccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc------------hHHHhhhccc
Q 045017 8 TGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV------------GAVYDMTLVS 53 (82)
Q Consensus 8 ~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~------------r~~yD~~~~~ 53 (82)
...|||+||||+++++.++||++||+|++++|||++ ..+|+.+...
T Consensus 25 ~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~ 82 (90)
T 2ys8_A 25 NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKN 82 (90)
T ss_dssp TCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCc
Confidence 358999999999999999999999999999999998 6677766543
No 14
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.49 E-value=2.4e-14 Score=89.53 Aligned_cols=39 Identities=49% Similarity=0.686 Sum_probs=36.3
Q ss_pred CCCCccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 5 VPGTGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 5 ~~~~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
......|+|+||||+++++.++||++|++|++++|||++
T Consensus 12 ~~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~ 50 (109)
T 2ctw_A 12 LSTSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKN 50 (109)
T ss_dssp TTSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTS
T ss_pred cCCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 345678999999999999999999999999999999998
No 15
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=1.6e-14 Score=90.57 Aligned_cols=36 Identities=19% Similarity=0.296 Sum_probs=34.5
Q ss_pred CccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 8 TGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 8 ~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
...|||+||||+++++.++||++||+|++++|||++
T Consensus 18 ~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~ 53 (112)
T 2ctq_A 18 DTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKH 53 (112)
T ss_dssp CCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 458999999999999999999999999999999998
No 16
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.48 E-value=2e-14 Score=88.86 Aligned_cols=35 Identities=43% Similarity=0.598 Sum_probs=33.6
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..|||+||||+++++.++||++|++|++++|||++
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~ 36 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRN 36 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 36999999999999999999999999999999997
No 17
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.44 E-value=6.8e-14 Score=85.00 Aligned_cols=37 Identities=22% Similarity=0.081 Sum_probs=35.0
Q ss_pred CCccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 7 GTGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 7 ~~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
....++|+||||+++|+.++||+|||+|++++|||++
T Consensus 13 ~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~ 49 (88)
T 1iur_A 13 SILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKN 49 (88)
T ss_dssp SCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTS
T ss_pred ccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCC
Confidence 4557999999999999999999999999999999999
No 18
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.42 E-value=6.5e-14 Score=87.18 Aligned_cols=38 Identities=32% Similarity=0.406 Sum_probs=35.1
Q ss_pred CCCccCccceeccCCCC-CHHHHHHHHHHHHHHhCCCCc
Q 045017 6 PGTGGSLYEVLRLEPTA-TILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 6 ~~~~~d~y~iLgv~~~a-~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.....|||+||||++++ +.++||++|+++++++|||++
T Consensus 11 ~~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~ 49 (109)
T 2qsa_A 11 YCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRV 49 (109)
T ss_dssp TTTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGC
T ss_pred HcCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 34568999999999999 999999999999999999974
No 19
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.39 E-value=1.7e-13 Score=89.70 Aligned_cols=38 Identities=32% Similarity=0.564 Sum_probs=35.4
Q ss_pred CCCccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 6 PGTGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 6 ~~~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.....|||+||||+++++.++||++||+|++++|||++
T Consensus 6 ~~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~ 43 (155)
T 2l6l_A 6 QMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQ 43 (155)
T ss_dssp CCCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCC
T ss_pred cCCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 34568999999999999999999999999999999996
No 20
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.39 E-value=2e-13 Score=91.33 Aligned_cols=34 Identities=35% Similarity=0.525 Sum_probs=33.1
Q ss_pred cCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 10 GSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 10 ~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.|||+||||+++|+.++||+|||+|++++|||++
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~ 35 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKN 35 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 5899999999999999999999999999999998
No 21
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.35 E-value=3.1e-13 Score=78.76 Aligned_cols=37 Identities=24% Similarity=0.233 Sum_probs=34.1
Q ss_pred CCccCccceeccCC-CCCHHHHHHHHHHHHHHhCCCCc
Q 045017 7 GTGGSLYEVLRLEP-TATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 7 ~~~~d~y~iLgv~~-~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
+...++|+||||++ +++.++||++||+|++++|||++
T Consensus 11 m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~ 48 (71)
T 2guz_A 11 MNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKG 48 (71)
T ss_dssp CCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGT
T ss_pred CCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCC
Confidence 34478999999999 79999999999999999999987
No 22
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.33 E-value=2.5e-13 Score=83.32 Aligned_cols=34 Identities=21% Similarity=0.261 Sum_probs=32.9
Q ss_pred cCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 10 GSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 10 ~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.++|++|||++.|+.++||+|||++++++|||++
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~ 66 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKA 66 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 5899999999999999999999999999999987
No 23
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.33 E-value=3.6e-13 Score=80.07 Aligned_cols=43 Identities=21% Similarity=0.349 Sum_probs=38.8
Q ss_pred cCccceeccCCC--CCHHHHHHHHHHHHHHhCCCCc---------hHHHhhhcc
Q 045017 10 GSLYEVLRLEPT--ATILEIKMAYRSLAKVYHPDFV---------GAVYDMTLV 52 (82)
Q Consensus 10 ~d~y~iLgv~~~--a~~~~Ik~ayr~l~~~~HPDk~---------r~~yD~~~~ 52 (82)
.++|+||||+++ ++.++||++||+|++++|||++ ..+|+.+..
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~~~~f~~i~~AYe~L~~ 64 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKT 64 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHhh
Confidence 689999999999 9999999999999999999998 667776553
No 24
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.28 E-value=3.3e-13 Score=91.03 Aligned_cols=35 Identities=34% Similarity=0.400 Sum_probs=31.3
Q ss_pred ccCccceeccCCCCC--HHHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEPTAT--ILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~--~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..|+|+||||+++|+ .++||+|||++++++|||++
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~ 46 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKG 46 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC--
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCC
Confidence 479999999999998 69999999999999999998
No 25
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.27 E-value=1.6e-12 Score=87.05 Aligned_cols=35 Identities=23% Similarity=0.345 Sum_probs=32.7
Q ss_pred ccCccceeccCCCCC--HHHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEPTAT--ILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~--~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..|||+||||+++++ .++||++||++++++|||++
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~ 39 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNF 39 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGS
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 479999999999887 99999999999999999996
No 26
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.27 E-value=1e-12 Score=83.14 Aligned_cols=45 Identities=27% Similarity=0.277 Sum_probs=39.4
Q ss_pred ccCccceeccCCCCCH--HHHHHHHHHHHHHhCCCCc---------hHHHhhhccc
Q 045017 9 GGSLYEVLRLEPTATI--LEIKMAYRSLAKVYHPDFV---------GAVYDMTLVS 53 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~--~~Ik~ayr~l~~~~HPDk~---------r~~yD~~~~~ 53 (82)
..++|+||||+++++. ++||+|||+|++++|||++ ..+|+.+...
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~~e~f~~I~~AYevL~d~ 62 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDG 62 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTTTTTHHHHHHHHHHHHH
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCccHHHHHHHHHHHHHHCCH
Confidence 4689999999999998 9999999999999999999 6677665533
No 27
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.26 E-value=4.5e-13 Score=97.36 Aligned_cols=36 Identities=42% Similarity=0.709 Sum_probs=0.0
Q ss_pred CccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 8 TGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 8 ~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
...|||+||||+++|+.+|||+|||+|++++|||++
T Consensus 26 ~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~ 61 (329)
T 3lz8_A 26 ELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVS 61 (329)
T ss_dssp ------------------------------------
T ss_pred cccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCC
Confidence 458999999999999999999999999999999987
No 28
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.26 E-value=1.4e-12 Score=81.51 Aligned_cols=35 Identities=17% Similarity=0.280 Sum_probs=32.6
Q ss_pred CccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 8 TGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 8 ~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
...|||+|||++. |+.++||+|||++++++|||++
T Consensus 39 ~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~ 73 (106)
T 3ag7_A 39 SGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKL 73 (106)
T ss_dssp TTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHH
T ss_pred ccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcC
Confidence 3479999999996 9999999999999999999987
No 29
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.25 E-value=1.9e-12 Score=86.54 Aligned_cols=33 Identities=18% Similarity=0.482 Sum_probs=32.0
Q ss_pred CccceeccCCCC--CHHHHHHHHHHHHHHhCCCCc
Q 045017 11 SLYEVLRLEPTA--TILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 11 d~y~iLgv~~~a--~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
|||+||||++++ +..+||++||+|++++|||++
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~ 36 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKF 36 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGG
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCC
Confidence 799999999999 999999999999999999997
No 30
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.22 E-value=5.6e-12 Score=86.64 Aligned_cols=36 Identities=17% Similarity=0.483 Sum_probs=33.4
Q ss_pred CccCccceeccCCC--CCHHHHHHHHHHHHHHhCCCCc
Q 045017 8 TGGSLYEVLRLEPT--ATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 8 ~~~d~y~iLgv~~~--a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
...|||+||||+++ ++.++||++||+|++++|||++
T Consensus 41 ~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~ 78 (207)
T 3bvo_A 41 PTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFF 78 (207)
T ss_dssp TTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGG
T ss_pred CCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 45799999999986 7899999999999999999997
No 31
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.15 E-value=1.2e-11 Score=83.82 Aligned_cols=34 Identities=24% Similarity=0.339 Sum_probs=33.2
Q ss_pred cCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 10 GSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 10 ~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.|+|+||||+++++.++||+|||++++++|||++
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~ 150 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKA 150 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGG
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcC
Confidence 6999999999999999999999999999999997
No 32
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.12 E-value=6.3e-11 Score=79.92 Aligned_cols=45 Identities=27% Similarity=0.470 Sum_probs=39.5
Q ss_pred CCccCcccee------ccCC-CCCHHHHHHHHHHHHHHhCCCCc----------------------hHHHhhhc
Q 045017 7 GTGGSLYEVL------RLEP-TATILEIKMAYRSLAKVYHPDFV----------------------GAVYDMTL 51 (82)
Q Consensus 7 ~~~~d~y~iL------gv~~-~a~~~~Ik~ayr~l~~~~HPDk~----------------------r~~yD~~~ 51 (82)
....|||+|| |+++ +++.++||++||+|++++|||++ |..||..+
T Consensus 8 ~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 8 RFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp CCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCSCSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCccHHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 3457999999 4665 89999999999999999999996 88999876
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.12 E-value=9e-12 Score=96.42 Aligned_cols=37 Identities=32% Similarity=0.472 Sum_probs=22.0
Q ss_pred CCccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 7 GTGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 7 ~~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
....|||+||||+++|+.++||+|||+|++++|||++
T Consensus 18 ~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~ 54 (780)
T 3apo_A 18 RHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKN 54 (780)
T ss_dssp -----CHHHHTCCTTCCHHHHHHHHCC----------
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 4568999999999999999999999999999999997
No 34
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.62 E-value=9.5e-09 Score=59.21 Aligned_cols=34 Identities=15% Similarity=0.188 Sum_probs=31.7
Q ss_pred cCccceeccCCC---CCHHHHHHHHHHHHHHhCCCCc
Q 045017 10 GSLYEVLRLEPT---ATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 10 ~d~y~iLgv~~~---a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..-|.||||+++ ++.++|+++||+|...+|||+.
T Consensus 4 ~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkG 40 (65)
T 2guz_B 4 DESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKG 40 (65)
T ss_dssp HHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGT
T ss_pred HHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCC
Confidence 456889999999 9999999999999999999987
No 35
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.72 E-value=1.2e-05 Score=56.00 Aligned_cols=34 Identities=38% Similarity=0.562 Sum_probs=32.4
Q ss_pred cCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 10 GSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 10 ~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.++|++||+...++.++|+++|+++++++|||+.
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~ 415 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNF 415 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGC
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCC
Confidence 4899999999999999999999999999999986
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=91.46 E-value=0.063 Score=40.91 Aligned_cols=35 Identities=26% Similarity=0.208 Sum_probs=28.4
Q ss_pred ccCccceeccCCCCCH--HHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEPTATI--LEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~--~~Ik~ayr~l~~~~HPDk~ 43 (82)
..|||++||++.+... .+|+++||++++..+++..
T Consensus 628 ~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~~~ 664 (681)
T 2pzi_A 628 KASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQRH 664 (681)
T ss_dssp CCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSHHH
T ss_pred CCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCChHH
Confidence 3569999999877655 7799999999998777743
No 37
>1qqr_A Streptokinase domain B; non-proteolytic, plasminogen activation, fibrinolysis, hydrolase activator; 2.30A {Streptococcus dysgalactiae subsp} SCOP: d.15.5.1 PDB: 1c4p_A
Probab=52.26 E-value=9.4 Score=24.43 Aligned_cols=32 Identities=25% Similarity=0.352 Sum_probs=28.1
Q ss_pred ccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 12 LYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 12 ~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
++..|.|....+.+||+++=..+..+.|||=.
T Consensus 34 ~l~~k~ig~~Its~eL~~~AqeiL~q~hp~Y~ 65 (138)
T 1qqr_A 34 LLKTLAIGDTITSQELLAQAQSILNKNHPGYT 65 (138)
T ss_dssp EEEEECTTCEEEHHHHHHHHHHHHHHHSTTEE
T ss_pred hhcccccCcccCHHHHHHHHHHHHHhcCCCcE
Confidence 36778888899999999999999999999954
No 38
>1vq8_S 50S ribosomal protein L23P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.12.1.1 PDB: 1vq4_S* 1vq5_S* 1vq6_S* 1vq7_S* 1s72_S* 1vq9_S* 1vqk_S* 1vql_S* 1vqm_S* 1vqn_S* 1vqo_S* 1vqp_S* 1yhq_S* 1yi2_S* 1yij_S* 1yit_S* 1yj9_S* 1yjn_S* 1yjw_S* 2otj_S* ...
Probab=36.28 E-value=31 Score=19.98 Aligned_cols=20 Identities=15% Similarity=0.077 Sum_probs=18.0
Q ss_pred eeccCCCCCHHHHHHHHHHH
Q 045017 15 VLRLEPTATILEIKMAYRSL 34 (82)
Q Consensus 15 iLgv~~~a~~~~Ik~ayr~l 34 (82)
++-|++.|+..+||+|-.++
T Consensus 26 ~F~V~~~AnK~qIK~ave~l 45 (85)
T 1vq8_S 26 QFAVDDRASKGEVADAVEEQ 45 (85)
T ss_dssp EEEECTTCCHHHHHHHHHHH
T ss_pred EEEECCCCCHHHHHHHHHHH
Confidence 67899999999999998877
No 39
>3r8s_T 50S ribosomal protein L23; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 3fik_T 3j19_T 2wwq_T 3oat_T* 3oas_T* 3ofd_T 3ofc_T 3ofr_T* 3ofz_T* 3og0_T 3ofq_T 3r8t_T 2j28_T 3e1b_M 3e1d_M 3iy9_T 3i1n_T 1p85_R 1p86_R 1vs8_T ...
Probab=34.48 E-value=33 Score=20.18 Aligned_cols=20 Identities=45% Similarity=0.499 Sum_probs=17.6
Q ss_pred eeccCCCCCHHHHHHHHHHH
Q 045017 15 VLRLEPTATILEIKMAYRSL 34 (82)
Q Consensus 15 iLgv~~~a~~~~Ik~ayr~l 34 (82)
++-|++.|+..|||+|-.++
T Consensus 31 ~F~V~~~AnK~eIK~AVE~l 50 (93)
T 3r8s_T 31 VLKVAKDATKAEIKAAVQKL 50 (93)
T ss_dssp EEEECSSCCHHHHHHHHHHH
T ss_pred EEEECCCCCHHHHHHHHHHH
Confidence 47899999999999998776
No 40
>2zjr_Q 50S ribosomal protein L23; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: d.12.1.1 PDB: 1sm1_R* 2aar_R 2d3o_R 2zjp_Q* 2zjq_Q 1nkw_R 3cf5_Q* 3dll_Q* 3pio_Q* 3pip_Q* 1nwy_R* 1nwx_R* 1xbp_R* 1pnu_R 1pny_R 1vor_U 1vou_U 1vow_U 1voy_U 1vp0_U
Probab=33.85 E-value=34 Score=20.22 Aligned_cols=20 Identities=35% Similarity=0.345 Sum_probs=18.3
Q ss_pred eeccCCCCCHHHHHHHHHHH
Q 045017 15 VLRLEPTATILEIKMAYRSL 34 (82)
Q Consensus 15 iLgv~~~a~~~~Ik~ayr~l 34 (82)
++-|++.|+..|||+|-.++
T Consensus 26 ~F~V~~~anK~eIK~aVE~l 45 (95)
T 2zjr_Q 26 SFWVSPKATKTEIKDAIQQA 45 (95)
T ss_dssp EEEECSSCTHHHHHHHHHHH
T ss_pred EEEEcCCCCHHHHHHHHHHH
Confidence 78899999999999998877
No 41
>3tve_T 50S ribosomal protein L23; RNA, ribosome, tRNA, translation, mRNA; 3.10A {Thermus thermophilus} PDB: 3pyr_T 3pyo_T 3pyv_T 3pyt_T 3tvh_T 1n88_A 1vsa_R 1vsp_R 2hgj_W 2hgq_W 2hgu_W 2j01_X 2j03_X 2jl6_X 2jl8_X 2v47_X 2v49_X 2wdi_X 2wdj_X 2wdl_X ...
Probab=32.10 E-value=39 Score=19.80 Aligned_cols=20 Identities=35% Similarity=0.375 Sum_probs=18.0
Q ss_pred eeccCCCCCHHHHHHHHHHH
Q 045017 15 VLRLEPTATILEIKMAYRSL 34 (82)
Q Consensus 15 iLgv~~~a~~~~Ik~ayr~l 34 (82)
++-|.+.|+..+||+|-.++
T Consensus 25 ~F~V~~~AnK~qIK~aVe~l 44 (92)
T 3tve_T 25 TFWVHPKATKTEIKNAVETA 44 (92)
T ss_dssp EEEECTTCCHHHHHHHHHHH
T ss_pred EEEECCCCCHHHHHHHHHHH
Confidence 57899999999999998877
No 42
>3j21_T 50S ribosomal protein L23P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=31.99 E-value=40 Score=19.56 Aligned_cols=20 Identities=25% Similarity=0.287 Sum_probs=17.7
Q ss_pred eeccCCCCCHHHHHHHHHHH
Q 045017 15 VLRLEPTATILEIKMAYRSL 34 (82)
Q Consensus 15 iLgv~~~a~~~~Ik~ayr~l 34 (82)
++-|.+.|+..+||+|-.++
T Consensus 27 ~F~Vd~~AnK~qIK~AVe~l 46 (86)
T 3j21_T 27 TFIVDRRATKQDIKRAVEEI 46 (86)
T ss_dssp EEEECTTCCHHHHHHHHHHH
T ss_pred EEEEcCCCCHHHHHHHHHHH
Confidence 47799999999999998876
No 43
>2lxi_A RNA-binding protein 10; NMR {Homo sapiens}
Probab=30.12 E-value=40 Score=18.59 Aligned_cols=21 Identities=24% Similarity=0.129 Sum_probs=17.9
Q ss_pred eeccCCCCCHHHHHHHHHHHH
Q 045017 15 VLRLEPTATILEIKMAYRSLA 35 (82)
Q Consensus 15 iLgv~~~a~~~~Ik~ayr~l~ 35 (82)
|=||+.+++.++|+..+.+..
T Consensus 6 v~nLp~~~te~~l~~~F~~~G 26 (91)
T 2lxi_A 6 LRMLPQAATEDDIRGQLQSHG 26 (91)
T ss_dssp EETCCSSCCHHHHHHHHHHHT
T ss_pred EeCCCCCCCHHHHHHHHHHhC
Confidence 348999999999999998764
No 44
>2pk2_A Cyclin-T1, protein TAT; TAR, twinning, transcription regulation P- TEFB, cell cycle; 2.67A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_C
Probab=24.62 E-value=1.5e+02 Score=21.03 Aligned_cols=30 Identities=10% Similarity=0.129 Sum_probs=22.4
Q ss_pred cCccceeccCCCCCHHHHHHHHHHHHHHhCCC
Q 045017 10 GSLYEVLRLEPTATILEIKMAYRSLAKVYHPD 41 (82)
Q Consensus 10 ~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD 41 (82)
..|+++|.. +.+.++|+..++.+...+.-.
T Consensus 219 ~~W~~~~~~--~vt~~~l~~i~~~il~~y~~~ 248 (358)
T 2pk2_A 219 KHWWEYVDA--TVTLELLDELTHEFLQILEKT 248 (358)
T ss_dssp CCTTTTSCS--SCCHHHHHHHHHHHHHHTTTC
T ss_pred cchHHHHhc--cCCHHHHHHHHHHHHHHHHhC
Confidence 568887743 568999999999997766433
No 45
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=22.57 E-value=70 Score=16.31 Aligned_cols=20 Identities=20% Similarity=0.255 Sum_probs=16.4
Q ss_pred eeccCCCCCHHHHHHHHHHH
Q 045017 15 VLRLEPTATILEIKMAYRSL 34 (82)
Q Consensus 15 iLgv~~~a~~~~Ik~ayr~l 34 (82)
|=+|+.+.+.++|+..+.+.
T Consensus 4 v~nLp~~~t~~~l~~~F~~~ 23 (75)
T 1iqt_A 4 VGGLSPDTPEEKIREYFGGF 23 (75)
T ss_dssp ESCCCSSCCHHHHHHHHHHH
T ss_pred EeCCCCCCCHHHHHHHHHhc
Confidence 34788999999999988775
No 46
>3kp1_E D-ornithine aminomutase S component; 5 aminomutase (OAM), metal binding protein; HET: PLP B12 5AD; 2.01A {Clostridium sticklandii} PDB: 3kow_E* 3koy_E* 3koz_E* 3kp0_E* 3kox_E*
Probab=20.40 E-value=98 Score=19.23 Aligned_cols=19 Identities=11% Similarity=0.158 Sum_probs=16.7
Q ss_pred CCCCHHHHHHHHHHHHHHh
Q 045017 20 PTATILEIKMAYRSLAKVY 38 (82)
Q Consensus 20 ~~a~~~~Ik~ayr~l~~~~ 38 (82)
.+.+.+|++..+++||.+.
T Consensus 15 ~~l~d~el~~rar~LA~kI 33 (121)
T 3kp1_E 15 ANLSDEELQTRFWEMAEKI 33 (121)
T ss_dssp TTCCHHHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHHH
Confidence 4779999999999999875
No 47
>2kfv_A FK506-binding protein 3; FKBP3-N, isomerase, nucleus, phosphoprotein, rotamase, structural genomics, PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=20.25 E-value=62 Score=19.14 Aligned_cols=18 Identities=28% Similarity=0.250 Sum_probs=15.6
Q ss_pred cCCCCCHHHHHHHHHHHH
Q 045017 18 LEPTATILEIKMAYRSLA 35 (82)
Q Consensus 18 v~~~a~~~~Ik~ayr~l~ 35 (82)
|.+++..+.|..||..|-
T Consensus 69 VaKtanK~~Li~AY~~Lf 86 (92)
T 2kfv_A 69 VAKTANKDHLVTAYNHLF 86 (92)
T ss_dssp HHTTCCHHHHHHHHHHHH
T ss_pred HHhcCcHHHHHHHHHHHH
Confidence 677899999999998874
Done!