Your job contains 1 sequence.
>045019
MSTSARAQASHDPNPNLHKPEPKESVNLFSTVNVPPDPLLDSGFFIDAAPPATSGSNTTT
TNDQTSKKRGTIREHKSENLATTNGTESALTPETASTRRLTATEAWLPPGWEIEDRVRTS
GATAGTVDKYYFHVASGRRFRSKKEVLYFLETGTKRKRRKENSNADMDSSGSAAGSTKQK
KPNIKAKTSALNFDYFNSPENVEWVLTDPSEGSWTPFIGKVEVPESVRQDWAAAFTDLTT
SNNGSKIC
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 045019
(248 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2148308 - symbol:MBD6 "methyl-CPG-binding doma... 380 4.0e-35 1
TAIR|locus:2075135 - symbol:MBD5 "methyl-CPG-binding doma... 333 3.8e-30 1
UNIPROTKB|F1RPM5 - symbol:MBD2 "Uncharacterized protein" ... 115 0.00023 1
UNIPROTKB|D4A986 - symbol:D4A986 "Uncharacterized protein... 115 0.00025 1
UNIPROTKB|Q9UBB5 - symbol:MBD2 "Methyl-CpG-binding domain... 115 0.00028 1
MGI|MGI:1333813 - symbol:Mbd2 "methyl-CpG binding domain ... 115 0.00029 1
>TAIR|locus:2148308 [details] [associations]
symbol:MBD6 "methyl-CPG-binding domain 6" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0008327 "methyl-CpG binding"
evidence=ISS;IDA] [GO:0051747 "cytosine C-5 DNA demethylase
activity" evidence=IDA] [GO:0005720 "nuclear heterochromatin"
evidence=IDA] [GO:0010370 "perinucleolar chromocenter"
evidence=IDA] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043621 "protein
self-association" evidence=IDA] [GO:0005731 "nucleolus organizer
region" evidence=IDA] InterPro:IPR001739 InterPro:IPR016177
Pfam:PF01429 PROSITE:PS50982 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0005720 GO:GO:0006351
GO:GO:0043621 SUPFAM:SSF54171 EMBL:AB025604 GO:GO:0005731
Gene3D:3.30.890.10 GO:GO:0008327 HSSP:Q9UNZ9 HOGENOM:HOG000029094
ProtClustDB:CLSN2685116 GO:GO:0010370 EMBL:BT004606 EMBL:AK227565
IPI:IPI00536761 RefSeq:NP_200746.1 UniGene:At.29228
ProteinModelPortal:Q9LTJ1 SMR:Q9LTJ1 STRING:Q9LTJ1
EnsemblPlants:AT5G59380.1 GeneID:836057 KEGG:ath:AT5G59380
TAIR:At5g59380 eggNOG:NOG272633 InParanoid:Q9LTJ1 OMA:VRIGMAN
PhylomeDB:Q9LTJ1 Genevestigator:Q9LTJ1 Uniprot:Q9LTJ1
Length = 225
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 84/217 (38%), Positives = 119/217 (54%)
Query: 35 PPDPLLDSGFFIDAAPPATSGSNTTTTNDQTSKKRGTIREHKSENLATTNGTESAL-TPE 93
PPDPLL SG FI +A T S+ Q G +S + NGT+ E
Sbjct: 10 PPDPLLASGAFISSAGDGTLDSSAKRRPIQGGI--GISGSGESVRIGMANGTDQVNHQTE 67
Query: 94 TASTRRLTATEAWLPPGWEIEDRVRTSGATAGTVDKYYFHVASGRRFRSKKEVLYFLETG 153
+ S +R + WLPPGW +ED++RTSGATAG+VDKYY+ +GR+FRS+ EVLY+LE G
Sbjct: 68 SKSRKRAAPGDNWLPPGWRVEDKIRTSGATAGSVDKYYYEPNTGRKFRSRTEVLYYLEHG 127
Query: 154 TKRKRRKEXXXXXXXXXXXXXXXTKQ--KKPNIKAKTSA-LNFDYFNSPENVEWVLTDPS 210
T ++ K+ + + + + L+FD+ N P+ V W + +
Sbjct: 128 TSKRGTKKAENTYFNPDHFEGQGSNRVTRTATVPPPPPPPLDFDFKNPPDKVSWSMANAG 187
Query: 211 EGSWTPFIGKVEVPESVRQDWAAAFTDLTTSNNGSKI 247
E W P IG V+V +SVR+DW+ AFT +T S N SK+
Sbjct: 188 EEGWIPNIGDVKVQDSVRRDWSTAFTFIT-SRNPSKV 223
>TAIR|locus:2075135 [details] [associations]
symbol:MBD5 "methyl-CPG-binding domain protein 5"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0008150 "biological_process" evidence=ND] [GO:0008327
"methyl-CpG binding" evidence=ISS;IDA] [GO:0005720 "nuclear
heterochromatin" evidence=IDA] [GO:0010370 "perinucleolar
chromocenter" evidence=IDA] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043621 "protein self-association" evidence=IDA]
InterPro:IPR001739 InterPro:IPR016177 Pfam:PF01429 PROSITE:PS50982
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0005720
GO:GO:0006351 GO:GO:0043621 SUPFAM:SSF54171 EMBL:AL133314
Gene3D:3.30.890.10 GO:GO:0008327 HSSP:Q9UNZ9 EMBL:AY063849
EMBL:AY142653 EMBL:AY086606 IPI:IPI00525141 PIR:T45595
RefSeq:NP_190242.1 UniGene:At.27178 ProteinModelPortal:Q9SNC0
SMR:Q9SNC0 STRING:Q9SNC0 PaxDb:Q9SNC0 PRIDE:Q9SNC0
EnsemblPlants:AT3G46580.1 GeneID:823811 KEGG:ath:AT3G46580
TAIR:At3g46580 eggNOG:NOG317012 HOGENOM:HOG000029094
InParanoid:Q9SNC0 OMA:SEHSEGR PhylomeDB:Q9SNC0
ProtClustDB:CLSN2685116 Genevestigator:Q9SNC0 GO:GO:0010370
Uniprot:Q9SNC0
Length = 182
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 74/168 (44%), Positives = 92/168 (54%)
Query: 87 ESALTP-ETASTRRLT-ATEAWLPPGWEIEDRVRTSGATAGTVDKYYFHVASGRRFRSKK 144
E+ TP ++ S +R T + WLPP W E RVRTSG AGTVDK+Y+ +GR+FRSK
Sbjct: 13 ENPATPVDSKSRKRATPGDDNWLPPDWRTEIRVRTSGTKAGTVDKFYYEPITGRKFRSKN 72
Query: 145 EVLYFLETGTKRKRR---KEXXXXXXXXXXXXXXXTKQKKPNIKAKT---SALNFDYFNS 198
EVLY+LE GT +K+ E +Q K N K LNFD+ N
Sbjct: 73 EVLYYLEHGTPKKKSVKTAENGDSHSEHSEGRGSARRQTKSNKKVTEPPPKPLNFDFLNV 132
Query: 199 PENVEWVLTDPSEGSWTPFIGKVEVPESVRQDWAAAFTDLTTSNNGSK 246
PE V W + SE +W PFIG ++ ESV QDW FT L TS N K
Sbjct: 133 PEKVTWTGINGSEEAWLPFIGDYKIQESVSQDWDRVFT-LVTSQNAGK 179
>UNIPROTKB|F1RPM5 [details] [associations]
symbol:MBD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070742 "C2H2 zinc finger domain binding" evidence=IEA]
[GO:0043623 "cellular protein complex assembly" evidence=IEA]
[GO:0042711 "maternal behavior" evidence=IEA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0035197 "siRNA
binding" evidence=IEA] [GO:0030177 "positive regulation of Wnt
receptor signaling pathway" evidence=IEA] [GO:0008327 "methyl-CpG
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR001739
InterPro:IPR016177 Pfam:PF01429 PROSITE:PS50982 SMART:SM00391
GO:GO:0005737 GO:GO:0003729 GO:GO:0003682 GO:GO:0042127
GO:GO:0000122 SUPFAM:SSF54171 GO:GO:0035197 GO:GO:0030177
GO:GO:0043623 GO:GO:0000792 Gene3D:3.30.890.10 GO:GO:0000118
GO:GO:0008327 GO:GO:0042711 InterPro:IPR025884 Pfam:PF14048
GeneTree:ENSGT00410000025376 OMA:DTEEVDI EMBL:CU041324
EMBL:CU464155 EMBL:FP339619 Ensembl:ENSSSCT00000005002
Uniprot:F1RPM5
Length = 360
Score = 115 (45.5 bits), Expect = 0.00023, P = 0.00023
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 94 TASTRRLTATEAWLPPGWEIEDRVRTSGATAGTVDKYYFHVASGRRFRSKKEVLYFL 150
T S +R+ LPPGW+ E+ +R SG +AG D YYF SG++FRSK ++ +L
Sbjct: 92 TESGKRMDCPA--LPPGWKKEEVIRKSGLSAGKSDVYYFS-PSGKKFRSKPQLARYL 145
>UNIPROTKB|D4A986 [details] [associations]
symbol:D4A986 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001739
InterPro:IPR016177 Pfam:PF01429 PROSITE:PS50982 SMART:SM00391
GO:GO:0005737 GO:GO:0003729 GO:GO:0003682 GO:GO:0042127
GO:GO:0000122 SUPFAM:SSF54171 GO:GO:0035197 GO:GO:0030177
GO:GO:0043623 GO:GO:0000792 Gene3D:3.30.890.10 GO:GO:0000118
GO:GO:0008327 GO:GO:0042711 InterPro:IPR025884 Pfam:PF14048
GeneTree:ENSGT00410000025376 OrthoDB:EOG4GF3FS IPI:IPI00363197
Ensembl:ENSRNOT00000016112 ArrayExpress:D4A986 Uniprot:D4A986
Length = 380
Score = 115 (45.5 bits), Expect = 0.00025, P = 0.00025
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 94 TASTRRLTATEAWLPPGWEIEDRVRTSGATAGTVDKYYFHVASGRRFRSKKEVLYFL 150
T S +R+ LPPGW+ E+ +R SG +AG D YYF SG++FRSK ++ +L
Sbjct: 113 TESGKRMDCPA--LPPGWKKEEVIRKSGLSAGKSDVYYFS-PSGKKFRSKPQLARYL 166
>UNIPROTKB|Q9UBB5 [details] [associations]
symbol:MBD2 "Methyl-CpG-binding domain protein 2"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030177 "positive
regulation of Wnt receptor signaling pathway" evidence=IEA]
[GO:0035197 "siRNA binding" evidence=IEA] [GO:0042127 "regulation
of cell proliferation" evidence=IEA] [GO:0042711 "maternal
behavior" evidence=IEA] [GO:0043623 "cellular protein complex
assembly" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0008327 "methyl-CpG binding" evidence=IDA;NAS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019904 "protein
domain specific binding" evidence=IPI] [GO:0070742 "C2H2 zinc
finger domain binding" evidence=IPI] [GO:0003696 "satellite DNA
binding" evidence=TAS] InterPro:IPR001739 InterPro:IPR016177
Pfam:PF01429 PROSITE:PS50982 SMART:SM00391 GO:GO:0005634
GO:GO:0005737 GO:GO:0045892 GO:GO:0003729 GO:GO:0006351
GO:GO:0003682 GO:GO:0042127 GO:GO:0000122 SUPFAM:SSF54171
GO:GO:0035197 Pathway_Interaction_DB:hdac_classi_pathway
GO:GO:0030177 GO:GO:0043623 GO:GO:0000792 Gene3D:3.30.890.10
GO:GO:0000118 GO:GO:0003696 DrugBank:DB01355 GO:GO:0008327
GO:GO:0042711 HOGENOM:HOG000013073 HOVERGEN:HBG052417
InterPro:IPR025884 Pfam:PF14048 EMBL:AF072242 EMBL:AF072246
EMBL:AF120989 EMBL:AF120988 EMBL:AF120993 EMBL:AF120990
EMBL:AF120991 EMBL:AF120992 EMBL:BC032638 IPI:IPI00434623
IPI:IPI00434624 IPI:IPI00434625 RefSeq:NP_003918.1
RefSeq:NP_056647.1 UniGene:Hs.25674 PDB:2L2L PDBsum:2L2L
ProteinModelPortal:Q9UBB5 SMR:Q9UBB5 IntAct:Q9UBB5 STRING:Q9UBB5
PhosphoSite:Q9UBB5 DMDM:50401198 PaxDb:Q9UBB5 PRIDE:Q9UBB5
Ensembl:ENST00000256429 Ensembl:ENST00000583046 GeneID:8932
KEGG:hsa:8932 UCSC:uc002lfg.2 UCSC:uc002lfh.2 CTD:8932
GeneCards:GC18M051615 HGNC:HGNC:6917 HPA:CAB037282 MIM:603547
neXtProt:NX_Q9UBB5 PharmGKB:PA30660 eggNOG:NOG316386
InParanoid:Q9UBB5 KO:K11590 OMA:DTEEVDI OrthoDB:EOG4GF3FS
PhylomeDB:Q9UBB5 ChiTaRS:MBD2 GenomeRNAi:8932 NextBio:33582
ArrayExpress:Q9UBB5 Bgee:Q9UBB5 CleanEx:HS_MBD2
Genevestigator:Q9UBB5 GermOnline:ENSG00000134046 Uniprot:Q9UBB5
Length = 411
Score = 115 (45.5 bits), Expect = 0.00028, P = 0.00028
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 94 TASTRRLTATEAWLPPGWEIEDRVRTSGATAGTVDKYYFHVASGRRFRSKKEVLYFL 150
T S +R+ LPPGW+ E+ +R SG +AG D YYF SG++FRSK ++ +L
Sbjct: 144 TESGKRMDCPA--LPPGWKKEEVIRKSGLSAGKSDVYYFS-PSGKKFRSKPQLARYL 197
>MGI|MGI:1333813 [details] [associations]
symbol:Mbd2 "methyl-CpG binding domain protein 2"
species:10090 "Mus musculus" [GO:0000118 "histone deacetylase
complex" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000785 "chromatin" evidence=IDA] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003729 "mRNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008327 "methyl-CpG binding" evidence=ISO;IDA]
[GO:0019904 "protein domain specific binding" evidence=ISO]
[GO:0030177 "positive regulation of Wnt receptor signaling pathway"
evidence=IGI] [GO:0035197 "siRNA binding" evidence=IDA] [GO:0042127
"regulation of cell proliferation" evidence=IGI] [GO:0042711
"maternal behavior" evidence=IMP] [GO:0043623 "cellular protein
complex assembly" evidence=IMP] [GO:0070742 "C2H2 zinc finger
domain binding" evidence=ISO] InterPro:IPR001739 InterPro:IPR016177
Pfam:PF01429 PROSITE:PS50982 SMART:SM00391 MGI:MGI:1333813
GO:GO:0005737 GO:GO:0003729 GO:GO:0006351 GO:GO:0003682
GO:GO:0042127 GO:GO:0000122 SUPFAM:SSF54171 GO:GO:0035197
GO:GO:0030177 GO:GO:0043623 GO:GO:0000792 Gene3D:3.30.890.10
GO:GO:0000118 GO:GO:0008327 GO:GO:0042711 CleanEx:MM_MBD2
HOGENOM:HOG000013073 HOVERGEN:HBG052417 InterPro:IPR025884
Pfam:PF14048 GeneTree:ENSGT00410000025376 CTD:8932 eggNOG:NOG316386
KO:K11590 OMA:DTEEVDI OrthoDB:EOG4GF3FS ChiTaRS:MBD2 EMBL:AF072243
EMBL:AF072245 EMBL:AF120986 EMBL:AF120983 EMBL:AF120984
EMBL:AF120985 EMBL:AC134831 EMBL:AC166815 EMBL:AC170591
EMBL:BC046607 IPI:IPI00131088 IPI:IPI00454212 RefSeq:NP_034903.2
UniGene:Mm.322 ProteinModelPortal:Q9Z2E1 SMR:Q9Z2E1 IntAct:Q9Z2E1
STRING:Q9Z2E1 PhosphoSite:Q9Z2E1 PaxDb:Q9Z2E1 PRIDE:Q9Z2E1
Ensembl:ENSMUST00000074058 Ensembl:ENSMUST00000114946 GeneID:17191
KEGG:mmu:17191 UCSC:uc008fom.2 UCSC:uc008fon.2 InParanoid:Q9Z2E1
NextBio:291534 Bgee:Q9Z2E1 Genevestigator:Q9Z2E1
GermOnline:ENSMUSG00000024513 Uniprot:Q9Z2E1
Length = 414
Score = 115 (45.5 bits), Expect = 0.00029, P = 0.00029
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 94 TASTRRLTATEAWLPPGWEIEDRVRTSGATAGTVDKYYFHVASGRRFRSKKEVLYFL 150
T S +R+ LPPGW+ E+ +R SG +AG D YYF SG++FRSK ++ +L
Sbjct: 147 TESGKRMDCPA--LPPGWKKEEVIRKSGLSAGKSDVYYFS-PSGKKFRSKPQLARYL 200
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.309 0.125 0.367 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 248 233 0.00086 113 3 11 23 0.38 34
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 598 (64 KB)
Total size of DFA: 184 KB (2105 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.88u 0.07s 21.95t Elapsed: 00:00:03
Total cpu time: 21.88u 0.07s 21.95t Elapsed: 00:00:04
Start: Mon May 20 19:57:27 2013 End: Mon May 20 19:57:31 2013