BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045020
(221 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|158828139|gb|ABW81018.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
Length = 672
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 93/148 (62%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF ++ + ++ PHDDALVI++ + N V RILID GSSV+++ +T+EKM + + I
Sbjct: 515 ISFNEEETRHLERPHDDALVITLDVANFEVSRILIDTGSSVDLIFLSTLEKMGISRGDIV 574
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
PL+ + S G I L V+AK S + DF+V + YN+ILG WI++M+AVP
Sbjct: 575 GPPSPLVAFTSESAMSLGTIKLPVLAKKVSKIVDFVVFDKPAAYNIILGTPWIYRMKAVP 634
Query: 170 STCHQVLCYQTIYGIEEIRGDQATAWAC 197
ST +Q + + T G+E IRGDQ + C
Sbjct: 635 STYYQCIKFPTSNGVETIRGDQEASRTC 662
>gi|4417309|gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 889
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 94/160 (58%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F ++ + PHDDALVI I +GN + I++D GSSV++L ++ K++
Sbjct: 47 ITFWESEITDLDKPHDDALVIRIDVGNYELSCIMVDTGSSVDVLFYDAFKRTGHLDSKLQ 106
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ PL G +G T S G I L IA+ LT+FLVV +P+N ILGR W+H M+AVP
Sbjct: 107 GRKTPLTGFAGDTTFSIGTIQLPTIARGVRQLTNFLVVDKKAPFNAILGRPWLHVMKAVP 166
Query: 170 STCHQVLCYQTIYGIEEIRGDQATAWACAVLALKETKRKD 209
ST HQ + + + GI + G Q ++ C + + ++ K+ D
Sbjct: 167 STYHQCIKFPSYKGIAVVYGSQRSSRKCYMGSYEDIKKAD 206
>gi|4406792|gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 764
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 88/153 (57%)
Query: 42 PFFESLSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM 101
P + ++ ++F +DL + PH+D LVI + IG V RILID GSSVN++ ++KM
Sbjct: 322 PATKEMTPLTFTSEDLFGVDLPHNDPLVIELHIGESEVTRILIDTGSSVNVVFKDVLQKM 381
Query: 102 RLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQW 161
++ IK +PL G G ++G I L + + F+VV + YN+ILG W
Sbjct: 382 KVHDRHIKPSVRPLTGFDGNTMMTNGTIKLPIYLGGAATWHKFVVVDKPTIYNIILGTPW 441
Query: 162 IHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATA 194
IH M+A+PS+ HQ + T GIE IRG+Q A
Sbjct: 442 IHDMQAIPSSYHQCIKIPTSIGIETIRGNQNLA 474
>gi|3377834|gb|AAC28207.1| T24H24.13 gene product [Arabidopsis thaliana]
gi|7267161|emb|CAB77873.1| putative transposon protein [Arabidopsis thaliana]
Length = 681
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 101/191 (52%), Gaps = 9/191 (4%)
Query: 24 CDDQL-AIVTFKRGLPS----NHPFFESLSEVSFLPQDLKLIQSPHDDALVISIKIGNCL 78
C+D + +I T +R S P +++F + + PHDDALVI I +GN
Sbjct: 490 CNDSINSIKTHQRKADSYTKGKSPMMGPNHQITFWESETTDLNKPHDDALVIRIDVGNYE 549
Query: 79 VKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSY 138
+ I+ID GSSV++L ++M +++ + PL G +G T S G I L IA+
Sbjct: 550 LSHIMIDTGSSVDVLFYDAFKRMGHLDSELQGRKTPLTGFAGDTTFSLGTIQLPTIARGV 609
Query: 139 SLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATA---- 194
LT FLVV +P+N ILGR W+H M+AVPST HQ + + + GI + A
Sbjct: 610 RRLTSFLVVNKKAPFNAILGRPWLHAMKAVPSTYHQCIKFPSDKGIAVVSAANAAPENAI 669
Query: 195 WACAVLALKET 205
WA +L+ + T
Sbjct: 670 WAVTILSKRLT 680
>gi|4836930|gb|AAD30632.1|AC006085_5 Hypothetical protein [Arabidopsis thaliana]
Length = 1295
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 90/146 (61%)
Query: 49 EVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
E+SF ++ + PHDDALVIS+ +GNC V+R+LID GSSV+++ T+ +M + + I
Sbjct: 447 EISFSEEETSDLDKPHDDALVISLDVGNCEVQRVLIDTGSSVDLIFLDTLVRMGISKKDI 506
Query: 109 KLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
K PL+ + + ITL V A+ + +F V + YN+ILG W+++M+AV
Sbjct: 507 KGALSPLVSFTSETSMLLRTITLPVTAQGIVKMIEFTVFDRPAAYNIILGTPWLYEMKAV 566
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATA 194
PST HQ + + T G+++I G Q T+
Sbjct: 567 PSTYHQCVKFPTPTGVKQILGSQRTS 592
>gi|147773339|emb|CAN60477.1| hypothetical protein VITISV_014549 [Vitis vinifera]
Length = 483
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 84/146 (57%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M ++
Sbjct: 337 FPPADPARTLQPHHDALILSLEIGDFDVRRILVDPGSSADLVQASVVSHMGHSLTGLENP 396
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
Q L G +G T S G I L V A +L F VV+ SP+N+ILGR W+H M+A+PST
Sbjct: 397 GQILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPST 456
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWAC 197
HQ++ + T G ++ G Q A C
Sbjct: 457 YHQIVSFLTNNGQTDLYGSQLAARQC 482
>gi|147807570|emb|CAN66184.1| hypothetical protein VITISV_025184 [Vitis vinifera]
Length = 465
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 104/197 (52%), Gaps = 9/197 (4%)
Query: 8 KYYIRRFR---LASAKVENCDDQLAIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPH 64
+Y RR R L +A V C I + + GL P + F P D PH
Sbjct: 275 EYDSRRKRQKLLRAASVREC-----INSIRPGLTGGGPRPID-GTIIFPPVDPTRTLQPH 328
Query: 65 DDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTN 124
DAL++S++IG+ V+RIL+D GSS +++ + V M ++ + L G +G T
Sbjct: 329 HDALILSLEIGDFDVRRILVDPGSSADLIQASVVSHMGHSLTGLENPGRVLSGFNGSSTT 388
Query: 125 SDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGI 184
S G I L V A +L FLVV+ SP+N+ILGR W+H M+A+PST HQ++ + T G
Sbjct: 389 SLGDIVLPVQAGPVTLNVQFLVVQELSPFNIILGRTWLHYMKAIPSTYHQMVSFLTNEGQ 448
Query: 185 EEIRGDQATAWACAVLA 201
++ G Q A C +A
Sbjct: 449 IDLYGSQLAARQCYQIA 465
>gi|147844137|emb|CAN80571.1| hypothetical protein VITISV_004508 [Vitis vinifera]
Length = 533
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 86/150 (57%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS N++ + V M +K
Sbjct: 378 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSTNLVQASVVGHMGHSLTGLKNP 437
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+N+ILGR W+H M+A+PST
Sbjct: 438 GRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPST 497
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 498 YHQMVSFLTNEGQIDLYGSQLAARQCYQIA 527
>gi|147835120|emb|CAN63372.1| hypothetical protein VITISV_035289 [Vitis vinifera]
Length = 549
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 89/153 (58%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSSV+++ + V++M +
Sbjct: 379 FPPVDPARTLQPHRDALILSLEIGDFDVRRILVDPGSSVDLVQASVVDRM---GHSLAGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+
Sbjct: 436 ENPGRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAI 495
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 496 PSTYHQMVSFLTNDGQIDLYGSQLAARQCYQIA 528
>gi|147815945|emb|CAN77145.1| hypothetical protein VITISV_038340 [Vitis vinifera]
Length = 539
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 90/164 (54%), Gaps = 6/164 (3%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F P D I PH DAL++ + IG+ V+RILID G+SV++L + + +M LE +
Sbjct: 367 IVFPPIDPTRILQPHRDALILFLGIGDFDVRRILIDPGNSVDLLQASVINQMGLE---LS 423
Query: 110 LFEQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMR 166
E P L G +G T S G I L V +L FLVV SP+N ILGR W+H M+
Sbjct: 424 DLENPGLILSGFNGAATTSLGDIMLSVQVGPVTLNVQFLVVGDLSPFNAILGRTWLHYMK 483
Query: 167 AVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLALKETKRKDS 210
+PST HQ++ + T G ++ G Q A C +A + KD
Sbjct: 484 TIPSTYHQMVSFLTEDGQIDLYGSQLAARQCYQIAREVGSSKDG 527
>gi|147833423|emb|CAN68523.1| hypothetical protein VITISV_025156 [Vitis vinifera]
Length = 483
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 93/168 (55%), Gaps = 6/168 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RILID GSS +++ + + M +
Sbjct: 313 FPPVDPTWTLQPHRDALILSLEIGDFDVRRILIDPGSSADLVQASVMSHM---GHTLTGL 369
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A S +L F VV+ SP+NVILGR W+H M+A+
Sbjct: 370 ENPGRILSGFNGSSTTSLGDIVLPVQAGSVTLNVQFSVVQELSPFNVILGRTWLHYMKAI 429
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLALKETKRKDSNFENQA 216
PST HQ++ + T G ++ G Q A C +A + ++ F ++
Sbjct: 430 PSTYHQMVSFLTNDGQIDLYGSQLVARQCYQIAREAGANQEDAFPPES 477
>gi|147833356|emb|CAN66239.1| hypothetical protein VITISV_041839 [Vitis vinifera]
Length = 549
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 88/150 (58%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D I PH D L++S++IG+ V+RIL+D GSSV+++ + V M +++
Sbjct: 379 FPPVDPTRILQPHRDTLILSLEIGDFDVRRILVDPGSSVDLVQASVVSHMGHSLTRLENP 438
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G + TNS G I L V A +L F VV+ SP+NVILGR W+H M+A+PST
Sbjct: 439 GRILSGFNRSSTNSLGDIVLPVQASPVTLNVQFSVVQDLSPFNVILGRTWLHYMKAIPST 498
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 499 YHQMVSFLTKDGQIDLYGSQLAARQCYQIA 528
>gi|147769210|emb|CAN65075.1| hypothetical protein VITISV_008148 [Vitis vinifera]
Length = 512
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 87/150 (58%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RILID GSS +++ + + M ++
Sbjct: 342 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILIDPGSSADLVQASVMGHMGHTLTGLENP 401
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
E+ L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+PST
Sbjct: 402 ERILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 461
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 462 YHQMVSFLTNDGQIDLYGSQLAARQCYQIA 491
>gi|147772290|emb|CAN63006.1| hypothetical protein VITISV_038956 [Vitis vinifera]
Length = 527
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 85/150 (56%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S+ IG+ V+R+L+D GSS N++ + + M ++
Sbjct: 357 FPPVDPTRTLQPHRDALILSLGIGDFDVRRVLVDPGSSANLVQASVIGHMGHSLTGLENP 416
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+PST
Sbjct: 417 GRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 476
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 477 YHQMVSFLTNEGQTDLYGSQLAARQCYQIA 506
>gi|147822718|emb|CAN72694.1| hypothetical protein VITISV_005169 [Vitis vinifera]
Length = 549
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 86/153 (56%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + + M +
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHM---GHSLAGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+
Sbjct: 436 ENPGRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAI 495
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 496 PSTYHQMVSFLTDEGQTDLHGSQLAARQCYQIA 528
>gi|147778589|emb|CAN64616.1| hypothetical protein VITISV_036197 [Vitis vinifera]
Length = 539
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 86/150 (57%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M ++
Sbjct: 369 FPPIDPARTLQPHRDALILSLEIGDFDVRRILVDPGSSTDLVQASVVSHMGHSLTGLENP 428
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+N+ILGR W+H M+A+PST
Sbjct: 429 GRILSGFNGSSTTSXGDIVLPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPST 488
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 489 YHQMVSFLTNEGQIDLYGSQLVARQCYQIA 518
>gi|147844181|emb|CAN82688.1| hypothetical protein VITISV_006268 [Vitis vinifera]
Length = 531
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 86/153 (56%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M +
Sbjct: 361 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHM---GHSLAGL 417
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+
Sbjct: 418 ENPGRILSGFNGSSTTSIGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAI 477
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 478 PSTYHQMVSFLTNEGQTDLYGSQLAARQCYQIA 510
>gi|147838530|emb|CAN67675.1| hypothetical protein VITISV_020901 [Vitis vinifera]
Length = 508
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 86/153 (56%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL+JS++IG+ V+RIL+D GSS +++ + V M +
Sbjct: 338 FPPVDPTRTLQPHRDALIJSLEIGDFDVRRILVDPGSSADLVQASVVGHM---GHSLAGL 394
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+
Sbjct: 395 ENPGRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAI 454
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 455 PSTYHQMVSFLTNDGQTDLYGSQLAARQCYQIA 487
Score = 36.6 bits (83), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A ++E C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQIEACSMDAVLQIFKRSMCPGTPFFESLAK 158
>gi|147770371|emb|CAN73648.1| hypothetical protein VITISV_036842 [Vitis vinifera]
Length = 526
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 86/150 (57%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RILID GSS +++ + V M ++
Sbjct: 356 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILIDPGSSADLVQASVVGHMGHTLTGLENP 415
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+PST
Sbjct: 416 GRILSGFNGFSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 475
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 476 YHQMVSFLTNDGQIDLYGSQLAACQCYQIA 505
Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQVEACSMDAVLQIFKRSICPGTPFFESLAK 158
>gi|147854055|emb|CAN83396.1| hypothetical protein VITISV_021698 [Vitis vinifera]
Length = 467
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 88/150 (58%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V +M + ++
Sbjct: 297 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGRMGRSLEGLENP 356
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+PST
Sbjct: 357 GRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 416
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 417 YHQMVSFLTNDGQIDLYGSQLAARQCYQIA 446
>gi|147856422|emb|CAN82845.1| hypothetical protein VITISV_005762 [Vitis vinifera]
Length = 514
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 85/149 (57%), Gaps = 6/149 (4%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH D L++S+++G+ V+RIL+D GSS +++ + V M +
Sbjct: 344 FPPVDPTRTLQPHRDTLILSLEVGDFDVRRILVDPGSSADLVQASVVSHM---GHSLAGL 400
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I LLV A +L FL+V+ SP+N+ILGR W+H M+A+
Sbjct: 401 ENPGRILSGFNGSSTTSLGDIVLLVQAGPVTLNVQFLMVQELSPFNIILGRAWLHYMKAI 460
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
PST HQ++ + T G ++ G Q A C
Sbjct: 461 PSTYHQMVSFLTNEGQIDLYGSQLAARQC 489
>gi|147833921|emb|CAN75010.1| hypothetical protein VITISV_003558 [Vitis vinifera]
Length = 446
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 86/153 (56%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M +
Sbjct: 276 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHM---GHSLAGL 332
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+
Sbjct: 333 ENPGRILSGFNGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAI 392
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 393 PSTYHQMVSFLTDEGQTDLYGSQLAARQCYQIA 425
>gi|147765788|emb|CAN60191.1| hypothetical protein VITISV_038417 [Vitis vinifera]
Length = 449
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 86/150 (57%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M ++
Sbjct: 279 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDXGSSADLVQASVVGHMGHSLXGLENP 338
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+PST
Sbjct: 339 GRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 398
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 399 YHQMVSFLTNEGQTDLYGSQLAARQCYQIA 428
Score = 36.6 bits (83), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A ++E C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQIEACSMDAVLQIFKRSICPGTPFFESLAK 158
>gi|147863622|emb|CAN84034.1| hypothetical protein VITISV_016994 [Vitis vinifera]
Length = 535
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 86/153 (56%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M +
Sbjct: 365 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHM---GHSLAGL 421
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+
Sbjct: 422 ENPGRILSGFNGSSTTSLGNIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAI 481
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 482 PSTYHQMVSFLTNDGQTDLYGSQLVARQCYQIA 514
>gi|147862327|emb|CAN84020.1| hypothetical protein VITISV_032574 [Vitis vinifera]
Length = 543
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 86/153 (56%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + + M +
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHM---GHSLAGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+
Sbjct: 436 ENPGRILSGFNGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAI 495
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 496 PSTYHQMVSFLTNEGQTDLYGSQLAARQCYQIA 528
>gi|147769062|emb|CAN61407.1| hypothetical protein VITISV_039734 [Vitis vinifera]
Length = 549
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 86/150 (57%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSSV+++ V M ++
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSVDLVQALVVSHMGHSLTGLENP 438
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+N+ILGR W+H M+A+PST
Sbjct: 439 GRILSGFNGSSTTSLGDIVLPVQADPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPST 498
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 499 YHQMVSFLTNEGHIDLYGSQLAARQCYQVA 528
>gi|147840280|emb|CAN68426.1| hypothetical protein VITISV_022197 [Vitis vinifera]
Length = 503
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 84/139 (60%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIV 122
PH DAL++S++IG+ V+RIL+D GSS +++ + V MR ++ + L G +G
Sbjct: 344 PHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMRHTLTGLENPGRILSGFNGSS 403
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
T S G I L V A +L F VV+ SP+NVILGR W+H M+A+PST HQ++ + T
Sbjct: 404 TTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQMVSFLTND 463
Query: 183 GIEEIRGDQATAWACAVLA 201
G ++ G Q A C +A
Sbjct: 464 GQIDLYGSQLAARQCYQIA 482
Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 1 MGRVETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
M E+L+ +++RF A +VE C + FKR + PFFESL++
Sbjct: 67 MQENESLREFVKRFGQAVLQVEACSMDAVLQIFKRSICPGTPFFESLAK 115
>gi|147820022|emb|CAN64897.1| hypothetical protein VITISV_002236 [Vitis vinifera]
Length = 549
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 86/153 (56%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + + M +
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHM---GHSLAGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+N+ILGR W+H M+A+
Sbjct: 436 ENPGRILSGFNGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAI 495
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 496 PSTYHQMVSFLTNEGQTDLYGSQLAARQCYQIA 528
>gi|147840514|emb|CAN70567.1| hypothetical protein VITISV_010971 [Vitis vinifera]
Length = 549
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 86/153 (56%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + + M +
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHM---GHSLAGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+
Sbjct: 436 ENPGRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAI 495
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 496 PSTYHQMVSFLTDEGQTDLYGXQLAARQCYQIA 528
>gi|147854331|emb|CAN83421.1| hypothetical protein VITISV_034226 [Vitis vinifera]
Length = 549
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 86/153 (56%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + + M +
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHM---GHSLAGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+N+ILGR W+H M+A+
Sbjct: 436 ENPGRILSGFNGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAI 495
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 496 PSTYHQMVSFLTNEGQTDLYGSQLAARQCYQIA 528
>gi|147859537|emb|CAN83531.1| hypothetical protein VITISV_012857 [Vitis vinifera]
Length = 550
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 86/150 (57%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D I PH DAL++S++IG+ V+RIL+D GSS +++ + V M ++
Sbjct: 380 FPPVDPTRILQPHRDALILSLEIGDFDVRRILVDPGSSTDLVQASVVSHMGHSLTGLENP 439
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+ +PST
Sbjct: 440 GRILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQDLSPFNVILGRTWLHYMKVIPST 499
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 500 YHQMVSFLTKDGQIDLYGSQLAARQCYQIA 529
>gi|147867409|emb|CAN81179.1| hypothetical protein VITISV_004999 [Vitis vinifera]
Length = 549
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 85/153 (55%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ V M +
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQATVVSHM---GHSLAGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+N+ILGR W+H M+A+
Sbjct: 436 ENPGRILSGFNGSSTTSLGDIVLPVQASPVTLNVQFSVVQELSPFNIILGRTWLHYMKAI 495
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 496 PSTYHQMVSFLTNEGQIDLYGSQLAARQCYQIA 528
>gi|147783766|emb|CAN70257.1| hypothetical protein VITISV_024386 [Vitis vinifera]
Length = 1032
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 94/169 (55%), Gaps = 7/169 (4%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D I PH DAL++S++IG+ V+RIL+D GSS +++ + + M +
Sbjct: 862 FPPVDSTRILHPHRDALILSLEIGDFDVRRILVDPGSSADLIQASVISHM---GHSLTGL 918
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I LLV +L F VV+ SP+NVILGR W+H M+ +
Sbjct: 919 ENPVRILSGFNGSSTTSLGDIVLLVQVGPVTLNVRFSVVQDLSPFNVILGRTWLHYMKGI 978
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLALKE-TKRKDSNFENQA 216
PST HQ++ + T G ++ G Q A C +A + T ++D++ +
Sbjct: 979 PSTYHQMVSFLTKDGQIDLYGSQLAARQCYQIAREAGTSQEDASLPQSS 1027
>gi|147858515|emb|CAN83099.1| hypothetical protein VITISV_008534 [Vitis vinifera]
Length = 515
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 85/153 (55%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + + M +
Sbjct: 345 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHM---GHSLAGL 401
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A L F VV+ SP+N+ILGR W+H M+A+
Sbjct: 402 ENPGRILSGFNGSSTTSLGDIILPVRAGPVXLNVQFSVVQELSPFNIILGRTWLHYMKAI 461
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 462 PSTYHQMVSFLTNEGQTDLYGSQLAARQCYQIA 494
>gi|147827043|emb|CAN62280.1| hypothetical protein VITISV_036523 [Vitis vinifera]
Length = 549
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 89/154 (57%), Gaps = 1/154 (0%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + + M ++
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVMSHMGHTLTGLENP 438
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+PST
Sbjct: 439 GRILSGFNGSSTTSLGDIVLPVQASPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 498
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLALKET 205
HQ++ + T G ++ G Q A C +A +ET
Sbjct: 499 YHQMVSFLTNDGQIDLYGSQLAARQCYQIA-RET 531
Score = 37.0 bits (84), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQVEACSMDAVLQIFKRSICPGTPFFESLAK 158
>gi|147783039|emb|CAN61180.1| hypothetical protein VITISV_041927 [Vitis vinifera]
Length = 549
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 88/153 (57%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V +M +
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGRM---GHSLAGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+
Sbjct: 436 ENPGRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAI 495
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST H+++ + T G ++ G+Q A C +A
Sbjct: 496 PSTYHKMVSFLTNDGQIDLYGNQLAARQCYQIA 528
Score = 36.6 bits (83), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A ++E C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQIEXCSMDAVLQIFKRSICPGTPFFESLAK 158
>gi|147857191|emb|CAN79223.1| hypothetical protein VITISV_018836 [Vitis vinifera]
Length = 549
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 87/153 (56%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RI++D GSS +++ + V +M +
Sbjct: 379 FPPVDPTRTLQPHXDALILSLEIGDFDVRRIVVDPGSSADLVQASVVGRM---GHSLAGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+
Sbjct: 436 ENPGRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAI 495
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 496 PSTYHQMVSFLTNDGQIDLYGSQLAARQCYQIA 528
>gi|147765578|emb|CAN64747.1| hypothetical protein VITISV_041324 [Vitis vinifera]
Length = 533
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 85/150 (56%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S+ IG+ V+R+L+D GSS +++ + + M ++
Sbjct: 363 FPPVDPTRTLQPHRDALILSLGIGDFDVRRVLVDPGSSADLVQASVIGHMGHSLTGLENP 422
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+PST
Sbjct: 423 GRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 482
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 483 YHQMVSFLTNEGQTDLYGSQLAARQCYQIA 512
Score = 36.6 bits (83), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A ++E C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQIEACSMDAVLQIFKRSICPGTPFFESLAK 158
>gi|147775423|emb|CAN76097.1| hypothetical protein VITISV_005211 [Vitis vinifera]
Length = 500
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 88/158 (55%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M ++
Sbjct: 330 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVSHMGHSLTGLENP 389
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+ +PST
Sbjct: 390 RRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKDIPST 449
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLALKETKRKD 209
HQ++ + T G ++ G Q A C +A + +D
Sbjct: 450 YHQMVSFLTNEGQIDLYGSQLAARQCYQIAREAGTSQD 487
>gi|147866075|emb|CAN83046.1| hypothetical protein VITISV_015526 [Vitis vinifera]
Length = 549
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 86/150 (57%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + + M ++
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVMSHMGHTLTGLENP 438
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+PST
Sbjct: 439 GRILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 498
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 499 YHQMVSFLTNDGQIDLYGSQLAARQCYQIA 528
Score = 36.2 bits (82), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A ++E C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQIEACSMDAVLQIFKRSICPGTPFFESLAK 158
>gi|147787156|emb|CAN64648.1| hypothetical protein VITISV_006642 [Vitis vinifera]
Length = 385
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 86/153 (56%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + + M +
Sbjct: 215 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVMSHM---GHTLTGL 271
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+
Sbjct: 272 ENPGRILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAI 331
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 332 PSTYHQMVSFLTNDGQIDLYGSQLAARQCYQIA 364
>gi|147769079|emb|CAN63675.1| hypothetical protein VITISV_021680 [Vitis vinifera]
Length = 517
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 84/146 (57%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RILID GSS +++ + V M ++
Sbjct: 347 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILIDPGSSTDLVQASVVGHMGHTLTGLENP 406
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+PST
Sbjct: 407 GRILSGFNGSSTTSLGDIILSVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 466
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWAC 197
HQ++ + T G ++ G Q A C
Sbjct: 467 YHQMVSFLTNDGQIDLYGSQLAARQC 492
Score = 36.6 bits (83), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A ++E C + FKR + + PFFESL++
Sbjct: 102 ESLREFVKRFGQAVLQIEACSMDAVLQIFKRSICPSTPFFESLAK 146
>gi|147853078|emb|CAN79086.1| hypothetical protein VITISV_027045 [Vitis vinifera]
Length = 537
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 87/153 (56%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P + PH DAL++S++IG+ V+RIL+D GSS +++ + V +M +
Sbjct: 367 FPPVNPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGRM---GHSLAGL 423
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+
Sbjct: 424 ENPGRILSGFNGSSTTSLGDIILSVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAI 483
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 484 PSTYHQMVSFLTNEGQIDLYGSQLAARQCYQIA 516
>gi|147858403|emb|CAN81407.1| hypothetical protein VITISV_007847 [Vitis vinifera]
Length = 504
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 85/150 (56%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M +K
Sbjct: 334 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSTDLVQASVVSHMGHSLVGLKNP 393
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+N+ILGR W+H M+ +PST
Sbjct: 394 GRILSGFNGSSTTSLGDIVLSVQAGPVTLNVQFSVVQELSPFNIILGRAWLHYMKVIPST 453
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 454 YHQMVSFLTNEGQIDLYGSQLAARQCYQIA 483
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQVEACSMDVVLQIFKRSICPGTPFFESLAK 158
>gi|147857916|emb|CAN82528.1| hypothetical protein VITISV_028060 [Vitis vinifera]
Length = 549
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 91/165 (55%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+ IL+D GSS +++ + V M ++
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRHILVDPGSSADLVQASVVGHMGHTLTGLENP 438
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+PST
Sbjct: 439 GRILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 498
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLALKETKRKDSNFENQA 216
HQ++ + T G ++ G Q A C +A + ++ F ++
Sbjct: 499 YHQMVSFLTNDGQIDLYGSQLAARQCYQIAREAGANQEDAFPPES 543
Score = 37.0 bits (84), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQVEACSMDAVLQIFKRSICPGTPFFESLAK 158
>gi|147785767|emb|CAN62122.1| hypothetical protein VITISV_016419 [Vitis vinifera]
Length = 537
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M ++
Sbjct: 367 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLTGLENL 426
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ + G +G T S G I L V +L F VV+ SP+NVILGR W+H M+ +PST
Sbjct: 427 GRVMSGFNGSSTTSLGDIILPVQVGPVTLNVQFSVVQELSPFNVILGRTWLHYMKVIPST 486
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLALKE-TKRKDSNFENQA 216
HQ++ + T G ++ G Q A C +A + T ++D++ +Q+
Sbjct: 487 YHQMVSFLTDEGQIDLYGSQLAARQCYQIAREAGTSQEDASPPDQS 532
>gi|147812424|emb|CAN61874.1| hypothetical protein VITISV_031102 [Vitis vinifera]
Length = 543
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 85/153 (55%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M +
Sbjct: 379 FPPXDPXRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHM---GHSLAGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G + T S G I L V A +L F VV+ SP+NVILGR W+H M+A+
Sbjct: 436 ENPGRILSGFNXSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAI 495
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 496 PSTYHQMVSFLTDEGQTDLYGSQLAARQCYQIA 528
>gi|147765594|emb|CAN71503.1| hypothetical protein VITISV_021014 [Vitis vinifera]
Length = 510
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 87/150 (58%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V + ++
Sbjct: 340 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHIGHSLASLENP 399
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+N+ILGR W+H M+A+PST
Sbjct: 400 RRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPST 459
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G+Q A C +A
Sbjct: 460 YHQMVSFLTNEGQIDLYGNQLAACQCYQIA 489
>gi|147842411|emb|CAN73937.1| hypothetical protein VITISV_022710 [Vitis vinifera]
Length = 527
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 87/150 (58%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V +M ++
Sbjct: 357 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDLGSSADLVQASVVGRMGRSLAGLENP 416
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L + A +L F VV+ SP+NVILGR W+H M+A+PST
Sbjct: 417 GRILSGFNGSSTTSLGDIILSIQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 476
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 477 YHQMVSFLTNDGQIDLYGSQLAARQCYQIA 506
>gi|147776094|emb|CAN67707.1| hypothetical protein VITISV_038230 [Vitis vinifera]
Length = 549
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 88/157 (56%), Gaps = 7/157 (4%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + + M +
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHM---GHSLAGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+ +
Sbjct: 436 ENPGRILSGFNGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKVI 495
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLALKET 205
PST HQ++ + T G ++ G Q A C +A +ET
Sbjct: 496 PSTYHQMVSFLTNEGQTDLYGSQLAARQCYQIA-RET 531
>gi|47232550|dbj|BAD18985.1| GAG-POL precursor [Vitis vinifera]
Length = 549
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 86/150 (57%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M ++
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLTGLENP 438
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+N+ILGR W+H M+A+PST
Sbjct: 439 GRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPST 498
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 499 YHQMVIFLTHDGQIDLYGSQLAARQCYQIA 528
Score = 37.0 bits (84), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQVEACSMDAVLQIFKRSICPGTPFFESLAK 158
>gi|147794769|emb|CAN69144.1| hypothetical protein VITISV_027771 [Vitis vinifera]
Length = 635
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 83/142 (58%)
Query: 56 DLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPL 115
D + PH DAL++++ +G+ VKRIL+D GSS ++L A +++M ++ E+ L
Sbjct: 469 DPAQVLQPHRDALILTLGVGDFDVKRILVDPGSSADLLQVAVIKQMGFIPSSLENPERTL 528
Query: 116 IGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQV 175
G +G T S G +TL V A L F VV+ SP+N ILGR W+H M+ VPST HQ+
Sbjct: 529 FGFNGSSTTSLGDVTLPVQAGPVILNALFSVVEDLSPFNAILGRTWLHGMKVVPSTYHQM 588
Query: 176 LCYQTIYGIEEIRGDQATAWAC 197
+ + T G ++ G Q A C
Sbjct: 589 VSFITQDGQIDLYGSQLAARQC 610
>gi|147780874|emb|CAN74913.1| hypothetical protein VITISV_016245 [Vitis vinifera]
Length = 455
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 86/153 (56%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M +
Sbjct: 285 FPPVDPTQTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHM---GHNLAGL 341
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P + G +G T S G I L V A +L F VV+ SP+N+ILGR W+H M+A+
Sbjct: 342 ENPGRIMSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAI 401
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 402 PSTYHQMVSFLTNEGQIDLYGSQFAAHQCYQIA 434
>gi|147866371|emb|CAN81980.1| hypothetical protein VITISV_032722 [Vitis vinifera]
Length = 549
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 86/153 (56%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V +M +
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGRM---GHSLAGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+ +
Sbjct: 436 ENPGRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKVI 495
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 496 PSTYHQMVSFLTNDGQIDLYGSQLAARQCYQIA 528
Score = 36.6 bits (83), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A ++E C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQIEACSMDAVLQIFKRSICPGTPFFESLAK 158
>gi|147851958|emb|CAN82272.1| hypothetical protein VITISV_006243 [Vitis vinifera]
Length = 472
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 83/144 (57%), Gaps = 1/144 (0%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M ++
Sbjct: 318 FPPVDPTWTLQPHRDALILSLEIGDYDVRRILVDPGSSADLVQASVVSHMGHNLTGLENP 377
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L FLVV+ SP+NVILGR W+H M+A+PST
Sbjct: 378 GRILSGFNGSSTTSLGDIILSVQADPVTLNVQFLVVQELSPFNVILGRTWLHYMKAIPST 437
Query: 172 CHQVLCYQTIYGIEEIRG-DQATA 194
HQ+L + Y I G DQ A
Sbjct: 438 YHQMLVARQCYQIAREAGTDQEDA 461
Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + FKR + PFFESL++
Sbjct: 71 ESLREFVKRFGQAVLQVEACSMHAVLQIFKRSICPGTPFFESLAK 115
>gi|147858370|emb|CAN81414.1| hypothetical protein VITISV_027487 [Vitis vinifera]
Length = 534
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 84/150 (56%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RILID SS N++ V M ++
Sbjct: 364 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILIDPSSSANLVQALVVSHMGHSLTGLENP 423
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+PST
Sbjct: 424 GRILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQDLSPFNVILGRTWLHYMKAIPST 483
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 484 YHQMVSFLTKDGQIDLYGSQLAARQCYQIA 513
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C+ + + FKR + + PFFESL++
Sbjct: 99 ESLREFVKRFGQAVLQVEACNMDVVLQIFKRSICPDTPFFESLAK 143
>gi|147825269|emb|CAN71085.1| hypothetical protein VITISV_036778 [Vitis vinifera]
Length = 549
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 85/150 (56%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M ++
Sbjct: 379 FPPIDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLTGLENP 438
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V +L F VV+ SP+NVILGR W+H M+A+PST
Sbjct: 439 GRILSGFNGSSTTSLGDIVLPVQVGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 498
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 499 YHQIVSFLTNDGQIDLYGSQLAARQCYQIA 528
Score = 36.6 bits (83), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + FKR + + PFFESL++
Sbjct: 114 ESLREFVKRFGQAILQVEACSMDAVLQIFKRNICPSTPFFESLAK 158
>gi|147775903|emb|CAN77967.1| hypothetical protein VITISV_027331 [Vitis vinifera]
Length = 491
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 85/150 (56%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M ++
Sbjct: 336 FPPVDPTRTLQPHCDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLASLENP 395
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A L F VV+ SP+NVILGR W+H M+A+PST
Sbjct: 396 GRILSGFNGSSTTSLGDIILPVQAGPVILNVQFSVVQELSPFNVILGRTWLHYMKAIPST 455
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 456 YHQMVSFLTNEGQTDLYGSQLAARQCYQIA 485
>gi|147822340|emb|CAN68500.1| hypothetical protein VITISV_026903 [Vitis vinifera]
Length = 501
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 87/150 (58%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D I PH DAL++S++IG+ V+RIL+D GSSV+++ + + M ++
Sbjct: 352 FPPADPTQILQPHRDALILSLEIGDFDVRRILVDPGSSVDLVQASVISHMGRSLTGLENP 411
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G + T S G I L V A +L F VV+ SP+NVILGR W++ M+A+PST
Sbjct: 412 XRILSGFNXASTTSLGDIVLPVQAGPITLNVQFSVVQDLSPFNVILGRTWLYYMKAIPST 471
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 472 YHQMVSFLTKDGQIDLYGSQLAARQCYQIA 501
>gi|109659804|dbj|BAE96748.1| GAG-POL precursor [Vitis vinifera]
Length = 279
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 86/150 (57%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M ++
Sbjct: 109 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLTGLENP 168
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+N+ILGR W+H M+A+PST
Sbjct: 169 GRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPST 228
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 229 YHQMVIFLTHDGQIDLYGSQLAARQCYQIA 258
>gi|147837609|emb|CAN74763.1| hypothetical protein VITISV_010750 [Vitis vinifera]
Length = 549
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 85/150 (56%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M ++
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLAGLENP 438
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+ +PST
Sbjct: 439 RRILSGFNGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNVILGRIWLHYMKVIPST 498
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 499 YHQMVSFLTDEGQTDLYGSQLAARQCYQIA 528
>gi|147777538|emb|CAN71571.1| hypothetical protein VITISV_042954 [Vitis vinifera]
Length = 514
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 85/153 (55%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL+ S++IG+ V+RIL+D GSS +++ + + M +
Sbjct: 344 FPPVDPTRTLQPHCDALIXSLEIGDFDVRRILVDPGSSADLVQASVIGHM---GHSLAGL 400
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+
Sbjct: 401 ENPGRILSGFNGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAI 460
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 461 PSTYHQMVSFLTNEGQTDLYGSQLAARQCYQIA 493
>gi|221271541|dbj|BAH15076.1| GAG-POL precursor [Vitis vinifera]
Length = 309
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 86/150 (57%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M ++
Sbjct: 139 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLTGLENP 198
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+N+ILGR W+H M+A+PST
Sbjct: 199 GRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPST 258
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 259 YHQMVIFLTHDGQIDLYGSQLAARQCYQIA 288
>gi|147814809|emb|CAN72341.1| hypothetical protein VITISV_025653 [Vitis vinifera]
Length = 474
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 87/161 (54%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ V M ++
Sbjct: 304 FPPVDPTRTLQPHHDALILSLEIGDFDVRRILVDPGSSADLVQALVVSHMGHSLTGLENP 363
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
Q L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+ +PST
Sbjct: 364 GQILSGFNGSSTTSLGDIILSVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKVIPST 423
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLALKETKRKDSNF 212
HQ++ + T G ++ Q A C +A K ++ F
Sbjct: 424 YHQMVSFLTNDGQIDLYDSQLAARQCYQIAQKTGTSQEDAF 464
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + + FKR + PFFESL++
Sbjct: 104 ESLREFVKRFGQAVFQVEACSMDVVLQIFKRSICPGTPFFESLAK 148
>gi|147803268|emb|CAN71051.1| hypothetical protein VITISV_003718 [Vitis vinifera]
Length = 491
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 83/142 (58%), Gaps = 6/142 (4%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQP---LIGLS 119
PH DAL++S++IG+ V+RIL+D GSS +++ + + M + E P L G +
Sbjct: 332 PHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHM---GHSLAGLENPGRILSGFN 388
Query: 120 GIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQ 179
G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+PST HQ++ +
Sbjct: 389 GSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQMVSFL 448
Query: 180 TIYGIEEIRGDQATAWACAVLA 201
T G ++ G Q A C +A
Sbjct: 449 TNEGQTDLYGSQLAARQCYQIA 470
>gi|147843105|emb|CAN81206.1| hypothetical protein VITISV_020911 [Vitis vinifera]
Length = 549
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 85/153 (55%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D SS +++ + V M +
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPXSSADLVQASVVGHM---GHSLAGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+
Sbjct: 436 ENPGRILSGFNGSSTTSLGDIILPVQAGPITLNVQFSVVQELSPFNVILGRTWLHYMKAI 495
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 496 PSTYHQMVSFLTNEGQTDLYGSQLAARQCYQIA 528
>gi|147802261|emb|CAN70509.1| hypothetical protein VITISV_027903 [Vitis vinifera]
Length = 549
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 86/150 (57%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M ++
Sbjct: 379 FPPVDPIRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLVSLENP 438
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+PST
Sbjct: 439 GRILSGFNGSSTTSLGDIILSVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 498
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G+Q C +A
Sbjct: 499 YHQMVSFLTNDGQTDLYGNQLATRQCYQIA 528
>gi|147818536|emb|CAN67468.1| hypothetical protein VITISV_031394 [Vitis vinifera]
Length = 549
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 85/153 (55%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + + M +
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHM---GHGLAGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A L F VV+ SP+N+ILGR W+H M+A+
Sbjct: 436 ENPGRILSGFNGSSTTSLGDIILPVRAGPVILNVQFSVVQELSPFNIILGRTWLHYMKAI 495
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 496 PSTYHQMVSFLTNEGQTDLYGSQLAARQCYQIA 528
>gi|147788587|emb|CAN63201.1| hypothetical protein VITISV_042456 [Vitis vinifera]
Length = 534
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 86/154 (55%)
Query: 48 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDK 107
S + F P D I P+ DAL++S+KIG+ V+RIL+D SS +++ + + M
Sbjct: 360 STIIFPPVDPTRILRPYRDALILSLKIGDFDVRRILVDPDSSTDLVQASIISHMGRSLTG 419
Query: 108 IKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRA 167
+K Q L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+
Sbjct: 420 LKNPRQILPGFNGASTTSLGDIVLSVQADPVTLNIQFSVVQDLSPFNVILGRTWLHYMKV 479
Query: 168 VPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
+P T HQ++ + T G ++ G Q A C +A
Sbjct: 480 IPYTYHQMVSFLTKDGQVDLYGSQLVARQCYQIA 513
>gi|147769760|emb|CAN70062.1| hypothetical protein VITISV_025666 [Vitis vinifera]
Length = 491
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 86/150 (57%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D I PH +AL++S++IG+ V+RIL+D GSS +++ + + M ++
Sbjct: 342 FPPVDPTRILHPHRNALILSLEIGDFDVRRILVDPGSSTDLVQASIISHMGHNLTGLESP 401
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+ +PST
Sbjct: 402 GRILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQDLSPFNVILGRTWLHYMKVIPST 461
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 462 YHQMVSFLTKDGQIDLYGSQLAARQCYQIA 491
>gi|147775800|emb|CAN62718.1| hypothetical protein VITISV_035362 [Vitis vinifera]
Length = 549
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 89/161 (55%), Gaps = 6/161 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + + M +
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSTDLVQASVIGHM---GHSLVGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+NVILGR W++ M+A+
Sbjct: 436 ENPGRILSGFNGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNVILGRTWLNYMKAI 495
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLALKETKRKD 209
PST HQ++ + T G ++ G Q A C +A + +D
Sbjct: 496 PSTYHQMVSFLTNEGQTDLYGSQLAARQCYQIAREAVANQD 536
>gi|147863995|emb|CAN80938.1| hypothetical protein VITISV_035835 [Vitis vinifera]
Length = 484
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 87/150 (58%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P DL I PH DAL++S+++ + V+RIL+D GSS +++ + + ++
Sbjct: 314 FPPVDLTRILHPHRDALILSLEVEDFDVRRILVDPGSSTDLVQASVISHRGQSLTGLENP 373
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
++ L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+PST
Sbjct: 374 KRILSGFNGSSTTSLGDIVLPVQAGPIALNVQFSVVQDLSPFNVILGRTWLHYMKAIPST 433
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 434 YHQMVSFLTKDGQIDLYGSQLAARQCYQIA 463
>gi|147826524|emb|CAN68506.1| hypothetical protein VITISV_034994 [Vitis vinifera]
Length = 549
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 84/150 (56%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++ ++IG+ V+RILID GSS + + + V M ++
Sbjct: 379 FPPVDPTRTLQPHRDALILFLEIGDFDVRRILIDPGSSADFVQASVVSHMGHTLTGLENP 438
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+PST
Sbjct: 439 GRILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQKLSPFNVILGRTWLHYMKAIPST 498
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 499 YHQMVSFLTNDGQIDLYGSQLVARQCYQIA 528
Score = 36.2 bits (82), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A ++E C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQIEACSMDAVLQIFKRSICPGTPFFESLAK 158
>gi|147771297|emb|CAN76249.1| hypothetical protein VITISV_015056 [Vitis vinifera]
Length = 549
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 85/153 (55%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M +
Sbjct: 379 FPPADPIRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHM---GHSLAGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+
Sbjct: 436 ENPGRILSXFNGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAI 495
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 496 PSTYHQMVSFLTDEGQTDLYGSQLAARQCYQIA 528
>gi|147773586|emb|CAN65418.1| hypothetical protein VITISV_016768 [Vitis vinifera]
Length = 510
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 86/150 (57%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M ++
Sbjct: 340 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSTDLVQASVVGHMGHSLVGLENP 399
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+PST
Sbjct: 400 GRILSGFNGSSTTSLGDIILPVQAGLVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 459
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 460 YHQMVSFLTYDGQIDLYGSQLAARQCYQIA 489
>gi|147782920|emb|CAN76814.1| hypothetical protein VITISV_044115 [Vitis vinifera]
Length = 507
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 85/153 (55%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M +
Sbjct: 337 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHM---GHSLAGL 393
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+
Sbjct: 394 ENPGRILSGFNGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAI 453
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T ++ G Q A C +A
Sbjct: 454 PSTYHQMVSFLTNEWQTDLYGSQLAARQCYQIA 486
>gi|147843831|emb|CAN79445.1| hypothetical protein VITISV_042481 [Vitis vinifera]
Length = 549
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 84/150 (56%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S+ IG+ V+R+L+D GSS +++ + + M ++
Sbjct: 379 FPPVDPTRTLQPHRDALILSLGIGDFDVRRVLVDPGSSADLVQASVIGHMGHSLTGLENP 438
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+ +PST
Sbjct: 439 GRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKXIPST 498
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 499 YHQMVSFLTNEGQTDLYGSQLAARQCYQIA 528
Score = 36.2 bits (82), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A ++E C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQIEACSMDAVLQIFKRSICPGTPFFESLAK 158
>gi|147780794|emb|CAN77221.1| hypothetical protein VITISV_033122 [Vitis vinifera]
Length = 549
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 85/153 (55%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M +
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQTSVVGHM---GHSLAGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+NVILG W+H M+A+
Sbjct: 436 ENPGRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGCTWLHYMKAI 495
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 496 PSTYHQMVSFLTNEGQTDLYGSQLAARQCYQIA 528
>gi|147846798|emb|CAN82733.1| hypothetical protein VITISV_028707 [Vitis vinifera]
Length = 515
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 85/153 (55%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IGN V+ IL+D GSS +++ + V M +
Sbjct: 345 FPPVDPTRTLQPHRDALILSLEIGNFDVRHILVDPGSSADLVQASVVSHM---GHSLAGL 401
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+N+ILGR W+H M+A+
Sbjct: 402 ENPGRILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAI 461
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
P T HQ++ + T G ++ G+Q A C +A
Sbjct: 462 PFTYHQMVSFLTNDGQIDLYGNQLAACQCYQIA 494
>gi|147765426|emb|CAN78106.1| hypothetical protein VITISV_014414 [Vitis vinifera]
Length = 534
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 85/150 (56%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D P DAL++S++IG+ V+RIL+B GSS +++ + V M ++
Sbjct: 364 FPPVDPTRTLQPXRDALILSLEIGDFDVRRILVBPGSSADLVQASVVGHMGHSLTGLENP 423
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+PST
Sbjct: 424 GRILSGFNGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 483
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 484 YHQMVSFLTDEGQTDLYGSQLAARQCYQIA 513
Score = 36.2 bits (82), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 5 ETLKYYIRRFRLASAKVENC--DDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A ++E C DD L I FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQIEGCSMDDVLQI--FKRSICPGTPFFESLAK 158
>gi|147860808|emb|CAN81064.1| hypothetical protein VITISV_000727 [Vitis vinifera]
Length = 515
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 84/150 (56%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M ++
Sbjct: 345 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSTDLVQASVVSHMGHSLTGLENL 404
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V +L F VV+ P+NVILGR W+H M+A+PST
Sbjct: 405 GRILSGFNGSSTTSLGDIVLTVQVGPVTLNVQFSVVQDLLPFNVILGRTWLHYMKAIPST 464
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 465 YHQMVSFLTNDGQIDLYGSQLAARQCYQIA 494
>gi|147845985|emb|CAN84173.1| hypothetical protein VITISV_001473 [Vitis vinifera]
Length = 525
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 85/153 (55%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P + PH DAL++S++IG+ V+RIL+D GSS +++ + V M +
Sbjct: 357 FPPANPIRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHM---GHSLAGL 413
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+ +
Sbjct: 414 ENPGRILSGFNGSSTTSLGDIILPVRAGPITLNVQFSVVQELSPFNVILGRTWLHYMKVI 473
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 474 PSTYHQMVSFLTDEGQTDLYGSQLAARQCYQIA 506
>gi|147836394|emb|CAN68774.1| hypothetical protein VITISV_042251 [Vitis vinifera]
Length = 537
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 85/153 (55%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M +
Sbjct: 367 FPPADPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASIVGHM---GHSLAGL 423
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+N+ILGR W+ M+A+
Sbjct: 424 ENPGRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNIILGRTWLQYMKAI 483
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 484 PSTYHQMVSFLTNKGQIDLYGSQLAARQCYQIA 516
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGXAVLQVEACSMDVVLQIFKRSICPGTPFFESLAK 158
>gi|147811444|emb|CAN72220.1| hypothetical protein VITISV_020540 [Vitis vinifera]
Length = 549
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 85/153 (55%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG V+RIL++ GSS +++ + M + +
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGGFDVRRILVNPGSSADLIQASVASHM---GHSLTVL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+N+ILGR W+H M+A+
Sbjct: 436 ENPGQILSGFNGSSTISLGDIVLPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAI 495
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 496 PSTYHQMVSFITSEGQIDLYGSQLAARQCYQIA 528
>gi|147854944|emb|CAN82408.1| hypothetical protein VITISV_023300 [Vitis vinifera]
Length = 549
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 85/150 (56%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RILID GSS +++ + V M ++
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILIDPGSSADLVQASVVGHMGHTLTGLEDP 438
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+PST
Sbjct: 439 GRILSEFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 498
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 499 YHQMVSFLTNDGQIDLYGSQLAARQCYQIA 528
Score = 36.2 bits (82), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAILQVEACSMDAVLQIFKRSICPGTPFFESLAK 158
>gi|147818434|emb|CAN67289.1| hypothetical protein VITISV_006206 [Vitis vinifera]
Length = 549
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 88/157 (56%), Gaps = 7/157 (4%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + + M +
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVMGHM---GHSLAGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ P+N+ILGR W+H M+A+
Sbjct: 436 ENPGRILSGFNGSSTTSLGDIILPVRAGLVTLNVQFSVVQELPPFNIILGRTWLHYMKAI 495
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLALKET 205
PST HQ++ + T G ++ G Q A C +A +ET
Sbjct: 496 PSTYHQMVSFLTNEGQTDLYGSQLAARQCYQIA-RET 531
>gi|147821394|emb|CAN65667.1| hypothetical protein VITISV_026649 [Vitis vinifera]
Length = 549
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 85/153 (55%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D SS +++ + + M +
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPXSSXDLVXASVIGHM---GHSLAGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+
Sbjct: 436 ENPGRILSGFNGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAI 495
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 496 PSTYHQMVSFLTNEGQTDLYGSQLAARQCYQIA 528
>gi|147810881|emb|CAN62963.1| hypothetical protein VITISV_021800 [Vitis vinifera]
Length = 549
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 84/150 (56%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S+ IG+ V+R+L+D GSS +++ + + M ++
Sbjct: 379 FPPVDPTRTLQPHRDALILSLGIGDFDVRRVLVDPGSSADLVQASVIGHMGHSLTGLENP 438
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+NVILG W+H M+A+PST
Sbjct: 439 GRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGGTWLHYMKAIPST 498
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 499 YHQMVSFLTNEGQTDLYGSQLAARQCYQIA 528
Score = 36.2 bits (82), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A ++E C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQIEACSMDAVLQIFKRSICPGTPFFESLAK 158
>gi|147773059|emb|CAN69410.1| hypothetical protein VITISV_012162 [Vitis vinifera]
Length = 523
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 84/150 (56%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+ IL+D GSS +++ + V M ++
Sbjct: 353 FPPVDPTRTLQPHRDALILSLEIGDFDVRHILVDPGSSADLVQASVVGHMGHSLTSLENP 412
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+ +PST
Sbjct: 413 GRILSGFNGSYTTSLGDIILPVKAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKVIPST 472
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 473 YHQMVSFLTDEGQIDLYGSQLAARQCYQIA 502
Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESL 47
E+L+ +++RF A +VE C + + FKR + PFFESL
Sbjct: 88 ESLREFVKRFGQAVLQVEACSMDVVLQIFKRSIYPGTPFFESL 130
>gi|147818476|emb|CAN65181.1| hypothetical protein VITISV_007174 [Vitis vinifera]
Length = 549
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 84/150 (56%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D SS +++ + V MR ++
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPSSSADLVQASVVGHMRHSLAGLENP 438
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T G I L V A +L F VV+ SP+NVILGR W+H M+ +PST
Sbjct: 439 GRILSGFNGSSTTFLGDIILPVQAGPVTLNLQFSVVQELSPFNVILGRTWLHYMKVIPST 498
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 499 YHQMVSFLTNEGQTDLYGSQLAARQCYQIA 528
>gi|3695395|gb|AAC62796.1| contains similarity to reverse transcriptase (Pfam: PF00078 rvt,
E=4.3e-08) [Arabidopsis thaliana]
gi|7267135|emb|CAB80803.1| AT4g03800 [Arabidopsis thaliana]
Length = 637
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 79/143 (55%), Gaps = 14/143 (9%)
Query: 48 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDK 107
S VSF ++ + I+ PHDDAL+I++ + N + RIL+D GSSV+++
Sbjct: 183 SSVSFDEEETRHIERPHDDALIITLDVANFKISRILVDTGSSVDLIFLGP---------- 232
Query: 108 IKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRA 167
PL+ + S G I L V+A S + DF+V + YN+ILG WI +M+A
Sbjct: 233 ----PSPLVAFTSESAMSLGTIKLPVLAGKMSKIVDFVVFDKPATYNIILGTPWIFQMKA 288
Query: 168 VPSTCHQVLCYQTIYGIEEIRGD 190
VPST HQ L + T G+E I GD
Sbjct: 289 VPSTYHQWLKFPTSNGVETIWGD 311
>gi|147778224|emb|CAN76478.1| hypothetical protein VITISV_028118 [Vitis vinifera]
Length = 517
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 86/150 (57%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V+ M ++
Sbjct: 347 FPPVDPTWTLQPHRDALILSLEIGDFDVRRILVDLGSSADLVQASVVDHMGHSLTGLENP 406
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G + T S G I L V A +L F VV+ SP+NVILGR W+H M+A+PST
Sbjct: 407 GRILSGFNESSTTSLGDIVLPVQAGLVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 466
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 467 YHQMVSFLTNNGQIDLYGSQLAARQCYQIA 496
>gi|147779189|emb|CAN76798.1| hypothetical protein VITISV_031331 [Vitis vinifera]
Length = 549
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 86/153 (56%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D I H DAL++S++IG+ V+RIL+D GSS +++ + + M +
Sbjct: 379 FPPIDPTRILHLHRDALILSLEIGDFDVRRILVDPGSSADLVQTSVISHM---GHSLTGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+
Sbjct: 436 ENPGLILSGFNGSSTTSLGDIVLSVQAGPVTLNVQFSVVQDLSPFNVILGRTWLHYMKAI 495
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 496 PSTYHQMISFLTKDGQIDLYGSQLAARQCYQIA 528
>gi|147795811|emb|CAN76528.1| hypothetical protein VITISV_017594 [Vitis vinifera]
Length = 477
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 83/146 (56%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH D L++S++IG+ V+RILID GSS +++ + V M ++
Sbjct: 331 FPPVDPTRTLQPHRDTLILSLEIGDFDVRRILIDPGSSADLVQASVVSHMGHSLTGLENP 390
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V + +L F VV+ SP+N+ILGR W+H M+A+PST
Sbjct: 391 GRILSGFNGSSTTSLGDIVLPVQSGPVTLNVQFSVVQDLSPFNIILGRTWLHYMKAIPST 450
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWAC 197
HQ++ + T G ++ G Q A C
Sbjct: 451 YHQMVSFLTNDGQIDLYGSQLAARQC 476
>gi|147859142|emb|CAN80403.1| hypothetical protein VITISV_041866 [Vitis vinifera]
Length = 482
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 6/149 (4%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M +
Sbjct: 336 FPPVDPTRTLQPHRDALILSLEIGDFDVQRILVDLGSSADLVQASVVSHM---GHSLAGL 392
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+N+ILGR W+H M+ +
Sbjct: 393 ENPVRILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKVI 452
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
PST HQ++ + T G ++ G Q A C
Sbjct: 453 PSTYHQMVSFLTNEGQIDLYGSQLAARQC 481
>gi|147858903|emb|CAN80838.1| hypothetical protein VITISV_042541 [Vitis vinifera]
Length = 508
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 84/146 (57%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH AL++S++IG+ V+RIL+D GSSV+++ + V +M ++
Sbjct: 338 FPPVDPTWTLQPHRGALILSLEIGDFDVRRILVDPGSSVDLVQASVVGRMGHSLTSLENP 397
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ S +NVILGR W+H M+A+PST
Sbjct: 398 RRILPGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQDLSSFNVILGRTWLHYMKAIPST 457
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWAC 197
HQ++ + T G ++ G Q A C
Sbjct: 458 YHQMVSFLTKDGQIDLYGSQLAARQC 483
Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + FKR + PFFESL++
Sbjct: 100 ESLREFVKRFGQAVPQVEACSMDAVLQIFKRSICPGTPFFESLAK 144
>gi|147856658|emb|CAN80311.1| hypothetical protein VITISV_040994 [Vitis vinifera]
Length = 434
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 97/173 (56%), Gaps = 1/173 (0%)
Query: 29 AIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGS 88
A++ + G PS+ + +S + L + + + PH D L++S++IG+ V+RIL+D GS
Sbjct: 242 AVIKYINGGPSDEEY-DSKGKKQRLLRAASVREHPHRDVLILSLEIGDFDVRRILVDPGS 300
Query: 89 SVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVK 148
S +++ + + M ++ + L G +G T S G I L V A +L F VV+
Sbjct: 301 SADLVQISVISHMGHSLTGLENPGRILSGFNGASTTSLGDIVLPVQAGPVTLNVQFSVVQ 360
Query: 149 ATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
SP+NVILGR W+H M+ +PST HQ++ + T G ++ G Q A C +A
Sbjct: 361 DLSPFNVILGRTWLHYMKVIPSTYHQMVSFLTKDGQIDLYGSQLAALQCYQIA 413
>gi|147780457|emb|CAN72634.1| hypothetical protein VITISV_007594 [Vitis vinifera]
Length = 455
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 86/152 (56%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F P D I PH DAL++S+++ + V+RILID GSS ++L + + M + ++
Sbjct: 280 IVFPPVDPTWILQPHHDALILSLEMRDFDVRRILIDLGSSADLLQTSVIGHMGRDLSGLE 339
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ L G +G T S G I L V A +L FLVV+ SP+N ILGR W+H M+ +P
Sbjct: 340 NPGRILSGFNGATTTSLGDIVLPVQAGPVTLNVQFLVVQDLSPFNAILGRTWLHYMKVIP 399
Query: 170 STCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
ST HQ++ + T G ++ +Q C +A
Sbjct: 400 STYHQMVSFLTEDGQIDLHDNQLATRQCYQIA 431
>gi|147773580|emb|CAN65419.1| hypothetical protein VITISV_023203 [Vitis vinifera]
Length = 549
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 84/153 (54%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D SS +++ + + M +
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPSSSADLVQASVIGHM---GHSLAGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+ +
Sbjct: 436 ENPGRILSGFNGSSTTSLGDIILPVQADPITLNVQFSVVQELSPFNVILGRTWLHYMKVI 495
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 496 PSTYHQMVSFLTDEGQTDLYGSQLAARQCYQIA 528
>gi|147843985|emb|CAN79434.1| hypothetical protein VITISV_043196 [Vitis vinifera]
Length = 549
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 85/153 (55%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D G+S +++ + + M +
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGNSADLVQASVIGHM---GHSLAGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G + T S G I L V A +L F VV+ SP+NVILGR W+H M+A+
Sbjct: 436 ENPGRILSGFNRSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAI 495
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 496 PSTYHQMVSFLTDEGQTDLYGSQLAARQCYQIA 528
>gi|147810387|emb|CAN67629.1| hypothetical protein VITISV_040829 [Vitis vinifera]
Length = 490
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 88/153 (57%), Gaps = 7/153 (4%)
Query: 56 DLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQP- 114
D I PH DAL++S++I + V+RIL+D+GSS +++ + V M + + E P
Sbjct: 339 DPTRILQPHHDALILSLEIRDFDVRRILVDSGSSADLVQASVVNHM---EHSLTGLENPG 395
Query: 115 --LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTC 172
L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+ +PST
Sbjct: 396 RLLSGFNGSSTTSLGDIVLPVQAGPITLNVQFSVVQDLSPFNVILGRTWLHYMKVIPSTY 455
Query: 173 HQVLCYQTIYGIEEIRGDQATAWACAVLALKET 205
HQ++ + T G ++ G Q A C +A +ET
Sbjct: 456 HQMVSFLTKDGQIDLYGSQLAARQCYQIA-RET 487
>gi|147790282|emb|CAN63321.1| hypothetical protein VITISV_032615 [Vitis vinifera]
Length = 549
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 84/153 (54%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+B SS +++ + V M +
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVBPXSSADLVQASVVGHM---GHSLAGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+ +
Sbjct: 436 ENPGRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKXI 495
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 496 PSTYHQMVSFLTNEGQTDLYGSQLAARQCYQIA 528
Score = 36.2 bits (82), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A ++E C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQIEACSMDAVLQIFKRSICPGTPFFESLAK 158
>gi|109659800|dbj|BAE96745.1| GAG-POL precursor [Vitis vinifera]
Length = 167
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 83/139 (59%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIV 122
PH DAL++S++IG+ V+RIL+D GSS +++ + V M ++ + L G +G
Sbjct: 8 PHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLTGLENPGRILSGFNGSS 67
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
T S G I L V A +L F VV+ SP+N+ILGR W+H M+A+PST HQ++ + T
Sbjct: 68 TTSLGDIILPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPSTYHQMVIFLTHD 127
Query: 183 GIEEIRGDQATAWACAVLA 201
G ++ G Q A C +A
Sbjct: 128 GQIDLYGSQLAARQCYQIA 146
>gi|147812662|emb|CAN68370.1| hypothetical protein VITISV_027470 [Vitis vinifera]
Length = 549
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 84/153 (54%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DA ++S++IG+ V+RIL+D SS +++ + V M +
Sbjct: 379 FPPVDPTRTLQPHRDAHILSLEIGDLDVRRILVDPDSSADLVQASVVGHM---GHSLAGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+
Sbjct: 436 ENPGRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAI 495
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 496 PSTYHQMVSFLTNDGQTDLYGSQLAARQCYQIA 528
>gi|147840668|emb|CAN66268.1| hypothetical protein VITISV_003570 [Vitis vinifera]
Length = 512
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 84/150 (56%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + + M ++
Sbjct: 342 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVMSHMGHTLTGLENP 401
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+NVILG W+H M+ +PST
Sbjct: 402 GRILSGFNGSSTTSLGDIVLPVQAGPVTLKVQFSVVQELSPFNVILGHTWLHYMKTIPST 461
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 462 YHQMVSFLTNDGQIDLYGSQLAARQCYQIA 491
Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + FKR + PFFESL++
Sbjct: 77 ESLREFVKRFGQAVLQVEACSMDAVLQIFKRSICPGTPFFESLAK 121
>gi|147794165|emb|CAN64459.1| hypothetical protein VITISV_008319 [Vitis vinifera]
Length = 540
Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 85/146 (58%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
FLP D I PH DAL++S++IG+ V+RIL+D GSS +++ + + M ++
Sbjct: 370 FLPVDPTWILHPHCDALILSLEIGDFDVRRILVDPGSSTDLVQASVISHMGHSLTGLENP 429
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F +V+ SP+NVILGR W++ M+++PST
Sbjct: 430 GRILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSMVQDLSPFNVILGRTWLYYMKSIPST 489
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWAC 197
HQ++ + T G ++ G Q C
Sbjct: 490 YHQMVSFLTKDGQIDLYGSQLATRQC 515
>gi|147811784|emb|CAN68191.1| hypothetical protein VITISV_025043 [Vitis vinifera]
Length = 386
Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 84/150 (56%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D I PH DAL++S++IG+ V+RIL+D GSS +++ + + M +K
Sbjct: 216 FPPVDPTRILHPHRDALILSLEIGDFDVRRILVDPGSSTDLVQASVISHMGHSLTGLKNP 275
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L + A +L F VV+ S +N+ILGR W+H M+ +PST
Sbjct: 276 RRILSGFNGSSTTSLGDIVLPIQAGPVTLNVQFSVVQDLSTFNIILGRTWLHYMKVIPST 335
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G + G Q A C +A
Sbjct: 336 YHQMVSFLTKDGQINLYGSQLVARQCYQIA 365
>gi|147775887|emb|CAN66797.1| hypothetical protein VITISV_039228 [Vitis vinifera]
Length = 478
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 84/150 (56%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D I PH DAL++S++IG+ V+RIL+D GSS ++ + V M ++
Sbjct: 308 FPPLDPTRILQPHRDALIMSLEIGDFDVRRILVDPGSSADLXQASVVNHMGHSLTGLENP 367
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L +G T S G I L V A +L F V++ SP+NVILG W+H M+A+PST
Sbjct: 368 GRILSRFNGSSTTSLGDIILXVQASPVTLNVQFSVLQXLSPFNVILGXTWLHYMKAIPST 427
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 428 YHQMVSFLTKDGQIDLYGSQLAARQCYQIA 457
>gi|147776509|emb|CAN65131.1| hypothetical protein VITISV_005198 [Vitis vinifera]
Length = 494
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 84/143 (58%), Gaps = 1/143 (0%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIV 122
PH DAL++S++IG+ V+RIL+D GSS +++ + V M ++ + L G +G
Sbjct: 335 PHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVSHMGHSLTGLENPGRILSGFNGSS 394
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
T S G I L V A +L F VV+ SP+NVILGR W+H M+ +PST HQ++ + T
Sbjct: 395 TTSLGDILLPVQASPVTLNVQFSVVQELSPFNVILGRTWLHYMKVIPSTYHQMVSFLTKD 454
Query: 183 GIEEIRGDQATAWACAVLALKET 205
G I Q TA C +A +ET
Sbjct: 455 GQINIYDSQLTARQCYQIA-RET 476
>gi|147852879|emb|CAN83382.1| hypothetical protein VITISV_024224 [Vitis vinifera]
Length = 463
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 85/148 (57%)
Query: 56 DLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPL 115
D I PH DAL++S+ IG+ V+RIL+D GSS +++ + + M ++ + L
Sbjct: 305 DPTRILQPHRDALILSLDIGDFDVRRILVDPGSSTDLVQASVISHMGHSLTGLENPGRIL 364
Query: 116 IGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQV 175
G +G T S G I L V A +L FLVV+ SP+NVILG W++ M+A+PST HQ+
Sbjct: 365 SGFNGASTTSLGDIVLPVQASPVTLNVQFLVVEDLSPFNVILGWTWLYYMKAIPSTYHQM 424
Query: 176 LCYQTIYGIEEIRGDQATAWACAVLALK 203
+ + T G ++ G Q A C +A +
Sbjct: 425 VSFLTEDGQIDLYGSQLAARQCYQIATR 452
>gi|147839135|emb|CAN61391.1| hypothetical protein VITISV_014768 [Vitis vinifera]
Length = 549
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 102/200 (51%), Gaps = 15/200 (7%)
Query: 8 KYYIRRFR---LASAKVENCDDQLAIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPH 64
+Y RR R L +A + C I + + GL P + F P + PH
Sbjct: 338 EYDSRRKRQKLLRAASIREC-----INSIRPGLTGGGPH-PIDGTIIFPPINPTRTLQPH 391
Query: 65 DDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQP---LIGLSGI 121
DAL++S++IG+ V+RIL+D SS +++ + V M + E P L G +G
Sbjct: 392 LDALILSLEIGDFDVRRILVDPSSSADLVQASVVSHM---GHSLAGLENPGRILSGFNGS 448
Query: 122 VTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTI 181
T S G I L V A +L F VV+ SP+N+ILGR W+H M+A+PST HQ++ + T
Sbjct: 449 STTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNIILGRAWLHYMKAIPSTYHQMVSFLTN 508
Query: 182 YGIEEIRGDQATAWACAVLA 201
G ++ G Q A C +A
Sbjct: 509 EGQIDLYGSQLAARQCYQIA 528
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQVEACSMDVVLQIFKRSICPGTPFFESLAK 158
>gi|147791488|emb|CAN65609.1| hypothetical protein VITISV_036151 [Vitis vinifera]
Length = 549
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 84/153 (54%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M +
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHM---GHSLAGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G + T S G I L V A +L F VV+ SP+NVILGR W+H M+ +
Sbjct: 436 ENPGRILSGFNRSSTTSLGDIILPVRAGLVTLNVQFSVVQELSPFNVILGRTWLHYMKVI 495
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 496 PSTYHQMVSFLTNEGQTDLYGSQLAARQCYQIA 528
Score = 36.2 bits (82), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A ++E C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVPQIEVCSMDAVLQIFKRSICPGTPFFESLAK 158
>gi|8778610|gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
Length = 1838
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 79/142 (55%)
Query: 48 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDK 107
+ +SF DL+ + +PH+D LV+ + I + V R+LID GSSV+++ + M + +
Sbjct: 598 APISFTDVDLEGLDTPHNDPLVVELIISDSRVTRVLIDTGSSVDLIFKDVLTAMNITDRQ 657
Query: 108 IKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRA 167
IK +PL G G + G I L + F+V+ + YNVILG WIH+M+A
Sbjct: 658 IKPVSKPLAGFDGDFVMTIGTIKLPIFVGGLIAWVKFVVIGKPAVYNVILGTPWIHQMQA 717
Query: 168 VPSTCHQVLCYQTIYGIEEIRG 189
+PST HQ + + T GI +R
Sbjct: 718 IPSTYHQCVKFPTHNGIFTLRA 739
>gi|147857041|emb|CAN79655.1| hypothetical protein VITISV_001095 [Vitis vinifera]
Length = 455
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 91/167 (54%), Gaps = 7/167 (4%)
Query: 56 DLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPL 115
D + PH DAL++++++G+ VKRIL+D SS ++L A +++M ++ + L
Sbjct: 289 DPARVLQPHRDALILTLRVGDFDVKRILVDPSSSADLLQVAVIKQMSFIPSSLENLGRTL 348
Query: 116 IGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQV 175
G +G T S G +TL V A L F VV+ SP+N ILGR W+H M+ VPST HQ+
Sbjct: 349 SGFNGSSTTSLGDVTLPVQAGPVILNVLFSVVEDLSPFNAILGRTWLHGMKVVPSTYHQM 408
Query: 176 LCYQTIYGIEEIRGDQATAWACAVLAL-------KETKRKDSNFENQ 215
+ + T G ++ Q A C +A +E K++N +Q
Sbjct: 409 VSFITQDGQIDLYESQLAAQQCYQIAREAGPNADREHSPKEANASDQ 455
>gi|147818093|emb|CAN64725.1| hypothetical protein VITISV_003445 [Vitis vinifera]
Length = 508
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 83/150 (55%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH BAL++S++IG+ V+RIL+D GS +++ + V M ++
Sbjct: 283 FPPVDPTRTLXPHRBALILSLEIGDFDVRRILVDPGSXADLVQASVVAHMGHSLAGLENP 342
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A L F VV+ SP+N+ILG W+H M+A+PST
Sbjct: 343 XRILSGFNGSSTTSLGDIILPVQAGPVILNVQFSVVQELSPFNIILGHTWLHYMKAIPST 402
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 403 YHQMVSFLTNEGXIDLYGSQLAARQCYQIA 432
>gi|147841874|emb|CAN78099.1| hypothetical protein VITISV_019421 [Vitis vinifera]
Length = 498
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 94/178 (52%), Gaps = 17/178 (9%)
Query: 29 AIVTFKRGLPSN----------HPFFESLS-------EVSFLPQDLKLIQSPHDDALVIS 71
A++ + G PS+ HP +++ + F P D I PH +AL++S
Sbjct: 304 AVINYINGGPSDEDIXARACQLHPAWDNWGGPRPIDGTIIFPPVDPTXILQPHRNALILS 363
Query: 72 IKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITL 131
++IG+ V+RIL+D GSS +++ + + M ++ + L G + T S G I L
Sbjct: 364 LEIGDFDVRRILVDPGSSTDLVQASVISHMGHSLIGLENPGRILSGFNRASTTSLGDIVL 423
Query: 132 LVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRG 189
LV A +L F VV+ SP+NVILGR W+H M+A+PST HQ+L + Y I G
Sbjct: 424 LVQAGPVTLNVQFSVVQDLSPFNVILGRTWLHYMKAIPSTYHQMLAARQCYQIAREAG 481
>gi|147823326|emb|CAN64193.1| hypothetical protein VITISV_027122 [Vitis vinifera]
Length = 394
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 87/153 (56%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D I PH D+L++S+++G+ V+RIL+D GSS +++ + + M ++ I L
Sbjct: 244 FPPVDPTRILQPHRDSLILSLEMGDFDVRRILVDPGSSADLVQASVISHM--GRNLIGL- 300
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L +G T S G I L V A +L F VV+ SP+NVILGR W+H M+ +
Sbjct: 301 ENPGRILSRFNGATTTSLGDIVLPVQAGPVTLNVQFSVVQDLSPFNVILGRTWLHYMKVI 360
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G + G Q A C +A
Sbjct: 361 PSTYHQMVSFLTEDGQINLYGSQLAARQCYQIA 393
>gi|147828281|emb|CAN77711.1| hypothetical protein VITISV_039025 [Vitis vinifera]
Length = 480
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 84/150 (56%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GS +++ + V M ++
Sbjct: 310 FPPVDPTQTLQPHHDALILSLEIGDFDVRRILVDPGSLADLVQASVVSHMGHSLAGLENP 369
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+N+ILGR W+H M+A+PST
Sbjct: 370 GRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPST 429
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T ++ G Q A C +A
Sbjct: 430 YHQMVSFLTNEVQIDLYGSQLAAHQCYQIA 459
>gi|147845799|emb|CAN82192.1| hypothetical protein VITISV_017992 [Vitis vinifera]
Length = 549
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 84/150 (56%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M ++
Sbjct: 379 FPPIDPTRTLQPHHDALILSLEIGDFDVRRILVDPGSSADLVQASVVSYMGHSLTGLENP 438
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L + A +L F +V+ SP+NVILGR W+H M+A+PST
Sbjct: 439 GRILSGFNGSSTTSLGDIVLSIQAGPVTLNVQFSMVQDLSPFNVILGRTWLHYMKAIPST 498
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T ++ G Q C +A
Sbjct: 499 YHQMVSFLTKDAQIDLYGSQLATRQCYQIA 528
Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQVEACSMDVVLQIFKRSICPGTPFFESLAK 158
>gi|147798487|emb|CAN72191.1| hypothetical protein VITISV_037821 [Vitis vinifera]
Length = 549
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 83/150 (55%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH D L++S++IG+ V+RIL+D GSS +++ + + M ++
Sbjct: 379 FPPVDPTRKLQPHRDTLILSLEIGDFDVRRILVDPGSSADLIQASVISHMGHSLTSLENP 438
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T G I L V A +L F VV+ SP+N+ILGR W+H M+ +PST
Sbjct: 439 GRILSGFNGSSTTFLGDIVLPVQAGPITLNVQFSVVQELSPFNIILGRTWLHYMKVIPST 498
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 499 YHQMVSFLTNKGQIDLYGSQLAARQCYRIA 528
Score = 37.0 bits (84), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQVEACSMDXVLQIFKRSIYPGTPFFESLAK 158
>gi|147845203|emb|CAN79471.1| hypothetical protein VITISV_019587 [Vitis vinifera]
Length = 514
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 95/174 (54%), Gaps = 6/174 (3%)
Query: 29 AIVTF-KRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNG 87
AI+ + RG P HP + + F P D PH DAL++S++IG+ V+RIL+D G
Sbjct: 325 AIINYINRGGP--HPIDGT---IIFPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPG 379
Query: 88 SSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVV 147
SS +++ + V M ++ + L +G T S G I L V A +L F +V
Sbjct: 380 SSADLVQASVVSHMGHTLTGLENPGRILSEFNGSSTTSLGDIVLPVQAGPVTLNVQFSIV 439
Query: 148 KATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
+ SP+NVIL R W+H M+A+PST HQ++ + T G ++ G Q A C +A
Sbjct: 440 QELSPFNVILERTWLHYMKAIPSTYHQMVSFLTNDGQIDLYGSQLAARQCYQIA 493
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQVEACSMDVVLQIFKRSICPGTPFFESLAK 158
>gi|147765695|emb|CAN60197.1| hypothetical protein VITISV_019179 [Vitis vinifera]
Length = 486
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 85/152 (55%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++I + V+RIL+D GSS +++ + V M ++
Sbjct: 316 FPPVDPTRTLQPHRDALILSLEIRDFDVRRILVDPGSSADLIQASVVSHMGHSLTGLENP 375
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ S +N+ILGR W+H M+A+PST
Sbjct: 376 GRILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSLFNIILGRTWLHYMKAIPST 435
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLALK 203
HQ++ + T G ++ G Q A C +A K
Sbjct: 436 YHQMVSFLTNEGQIDLYGSQLAARQCYQIARK 467
>gi|147863549|emb|CAN81923.1| hypothetical protein VITISV_016003 [Vitis vinifera]
Length = 512
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 94/167 (56%), Gaps = 12/167 (7%)
Query: 52 FLPQD-LKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKL 110
F P D ++ +QS H DAL++S++IG+ V+RIL+D GS +++ + V M +
Sbjct: 342 FPPVDPIRTLQS-HRDALILSLEIGDFDVRRILVDPGSLADLVQASVVGHM---GHSLAG 397
Query: 111 FEQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRA 167
E P L G +G T S G I L V A +L F VV+ SP+N+ILGR W+H M+A
Sbjct: 398 LENPGRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKA 457
Query: 168 VPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLALKETKRKDSNFEN 214
+PST HQ++ + T G ++ G Q A C +A + +N EN
Sbjct: 458 IPSTYHQMVSFLTNEGQIDLYGSQLAARQCYQIA----REAGANQEN 500
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+LK +++RF A +VE C+ + FKR + + PFFESL++
Sbjct: 114 ESLKEFVKRFGQAVLQVEACNMDAVLQIFKRSICPSTPFFESLAK 158
>gi|147777322|emb|CAN73692.1| hypothetical protein VITISV_042264 [Vitis vinifera]
Length = 539
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 88/162 (54%), Gaps = 11/162 (6%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH D L++S++I + V+RIL+D GSSV+++ + V +
Sbjct: 379 FPPVDPTRTLQPHRDTLILSLEIRDFDVRRILVDPGSSVDLVQASVVGHI---------- 428
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
L G +G T S G I L V +L F VV+ SP+NVILGR W+H M+A+PST
Sbjct: 429 GHILSGFNGSSTTSLGDIILPVQVGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 488
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLALKE-TKRKDSNF 212
HQ++ + T G + G Q A C +A + T R+D++F
Sbjct: 489 YHQMVSFLTNEGQINLYGSQLAARQCYQIARETGTSREDASF 530
>gi|147795070|emb|CAN67429.1| hypothetical protein VITISV_004709 [Vitis vinifera]
Length = 477
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 78/132 (59%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D I PH D L++S++IG+ V+ IL+D GSS +++ + + M ++
Sbjct: 341 FPPVDPTRILQPHRDTLILSLEIGDFDVRLILVDPGSSXDLVQASVISHMGRSLTGLENP 400
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L FLVV+ SP+NVILGR W+H M+A+PST
Sbjct: 401 RRILSGFNGASTTSLGDIVLPVQAXPVTLNVQFLVVQDLSPFNVILGRTWLHYMKAIPST 460
Query: 172 CHQVLCYQTIYG 183
HQ++ + T G
Sbjct: 461 YHQMVSFLTKDG 472
>gi|147818790|emb|CAN65037.1| hypothetical protein VITISV_007006 [Vitis vinifera]
Length = 271
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 86/161 (53%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F P DL + PH DAL++++ I N V++I +D SS+++L + ++M ++
Sbjct: 99 ITFPPVDLNRVLQPHQDALILTLGISNFDVRQIFVDPSSSIDLLQMSAFKQMEFPPSALE 158
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ L G +G T G I L V AK L FLV++ SP+N I+ R W+H M+++P
Sbjct: 159 NLGRILSGFNGAFTTFLGDIMLPVQAKPVILNIQFLVIEDLSPFNAIMERTWLHGMKSIP 218
Query: 170 STCHQVLCYQTIYGIEEIRGDQATAWACAVLALKETKRKDS 210
S HQ++ Y G + G Q A C +A + D+
Sbjct: 219 SIYHQMVSYLIEDGQINLYGSQLAAHQCYQVACESGFASDN 259
>gi|147852424|emb|CAN83773.1| hypothetical protein VITISV_043299 [Vitis vinifera]
Length = 497
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 84/150 (56%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D I PH DAL++S+++ + V+RIL+D G+S +++ + + M ++
Sbjct: 327 FPPVDPTRILQPHRDALIMSLEMEDFDVRRILVDPGNSADLVQPSAISHMGRNLTGLENP 386
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G + T S G I L V A +L F VV+ SP+NVILGR W+H M+ +PST
Sbjct: 387 RRILSGFNETATTSLGDIVLSVQANPVTLNVQFSVVQDLSPFNVILGRTWLHYMKVIPST 446
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 447 YHQMVSFLTEDGQIDLYGSQLAARQCYQIA 476
>gi|147863023|emb|CAN82985.1| hypothetical protein VITISV_030340 [Vitis vinifera]
Length = 534
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 84/150 (56%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D H DAL++S++IG+ V+RILID GSS +++ + V M ++
Sbjct: 379 FPPVDPTRTLQQHRDALILSLEIGDFDVRRILIDPGSSADLVQASVVGHMGHTLTGLENP 438
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+PST
Sbjct: 439 GRILSRFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 498
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 499 YHQMVSFLTNDGQIDLYGSQLAARQCYQIA 528
Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQVEACSMDVVLQIFKRSICPGTPFFESLAK 158
>gi|147834533|emb|CAN74139.1| hypothetical protein VITISV_038754 [Vitis vinifera]
Length = 1387
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 87/150 (58%)
Query: 55 QDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQP 114
Q L + SPH DAL++S++I + V+RIL+D GS +++ + + M ++ +
Sbjct: 346 QRLLRVASPHRDALILSLEIRDFDVRRILVDPGSLADLVQASVISHMGRNLAGLENPGRI 405
Query: 115 LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
L G +G T S G I L + A +L F VV+ SP++VILGR W+H M+A+PST HQ
Sbjct: 406 LSGFNGASTTSLGDIVLPIQAGPVTLNIQFSVVQGLSPFDVILGRTWLHYMKAIPSTYHQ 465
Query: 175 VLCYQTIYGIEEIRGDQATAWACAVLALKE 204
++ + T G ++ G Q A C +A ++
Sbjct: 466 MVSFLTKDGQIDLYGSQLAARQCYQIAREQ 495
>gi|147855528|emb|CAN79601.1| hypothetical protein VITISV_015421 [Vitis vinifera]
Length = 505
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 81/135 (60%), Gaps = 6/135 (4%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQP---LIGLS 119
PH DAL++S++IG+ V+RIL+D G+S +++ + V M ++ E P L G +
Sbjct: 348 PHRDALILSLEIGDFDVRRILVDPGNSADLVQASVVSHM---GHRLTGLENPGRILSGFN 404
Query: 120 GIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQ 179
G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+PST HQ++ +
Sbjct: 405 GSSTTSLGDIILPVQAGLVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQMVSFL 464
Query: 180 TIYGIEEIRGDQATA 194
T G ++ G Q A
Sbjct: 465 TNEGQIDLYGSQLVA 479
>gi|147779354|emb|CAN70083.1| hypothetical protein VITISV_008998 [Vitis vinifera]
Length = 514
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 79/135 (58%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIV 122
PH DAL++S++IG+ V+RIL+D GSS +++ + V M ++ + L G +
Sbjct: 379 PHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVSHMGHSLTGLENPGRILSGFNRSS 438
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
T S G I L V A +L FLVV+ P+N+ILGR W+H M+A+PST HQ++ + T
Sbjct: 439 TTSLGDIVLPVQAGPVTLNVQFLVVQELPPFNIILGRTWLHYMKAIPSTYHQMVSFLTND 498
Query: 183 GIEEIRGDQATAWAC 197
G ++ G Q C
Sbjct: 499 GQVDLYGSQLATRQC 513
>gi|147779459|emb|CAN69926.1| hypothetical protein VITISV_027209 [Vitis vinifera]
Length = 549
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 81/139 (58%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIV 122
PH DAL++S++IG+ V+RIL+D GSS +++ + V M ++ + L G +G
Sbjct: 390 PHRDALILSLEIGDFEVRRILVDPGSSADLIQASVVSHMGHTLIGLENPGRILSGFNGSS 449
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
T S G I L V A +L F +V+ SP+N+ILGR W+H M+ +PST HQ + + T
Sbjct: 450 TTSLGDIVLPVQAGPVTLNVQFSMVQELSPFNIILGRIWLHYMKVIPSTYHQTVSFLTNN 509
Query: 183 GIEEIRGDQATAWACAVLA 201
G ++ G Q A C +A
Sbjct: 510 GQIDLYGSQLAARQCYQIA 528
Score = 36.6 bits (83), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAILQVEACSMDAVLQIFKRSICPGTPFFESLAK 158
>gi|147805420|emb|CAN67442.1| hypothetical protein VITISV_020355 [Vitis vinifera]
Length = 537
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 83/150 (55%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M ++
Sbjct: 367 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDLGSSADLMQASVVGHMGHTLTGLENP 426
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+N ILG W+H M+A+PST
Sbjct: 427 GRILSGFNGSSTTSLGDIILSVQAGPVTLNVQFSVVQELSPFNFILGHTWLHYMKAIPST 486
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q C +A
Sbjct: 487 YHQMVSFLTNDGQIDLYGSQLAIRQCYQIA 516
Score = 36.2 bits (82), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESL 47
E+L+ +++RF A +VE C + FKR + PFFESL
Sbjct: 114 ESLREFVKRFGQAVLQVEACSMDAVLQIFKRSIYPGTPFFESL 156
>gi|147798698|emb|CAN67612.1| hypothetical protein VITISV_011155 [Vitis vinifera]
Length = 438
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 82/146 (56%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S +IG+ V+RIL+D SS +++ + V M ++
Sbjct: 292 FPPVDPTRTLQPHHDALILSQEIGDFDVRRILVDPVSSADLVQASVVSHMGHNLTGLENP 351
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S I L V A +L FLVV+ SP+N+ILGR W+H M+A+PST
Sbjct: 352 GRILSGFNGSSTTSLEDIVLSVQAGPVTLNVQFLVVQELSPFNIILGRTWLHYMKAIPST 411
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWAC 197
HQ++ + T G ++ G Q A C
Sbjct: 412 YHQMVSFLTNDGQIDLYGSQLAARQC 437
>gi|147805831|emb|CAN76027.1| hypothetical protein VITISV_031528 [Vitis vinifera]
Length = 527
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 86/154 (55%), Gaps = 1/154 (0%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+ IL+D GSS +++ + V +M ++
Sbjct: 357 FPPVDPTRTLQPHRDALILSLEIGDFDVRHILVDPGSSADLVQASVVGRMGHSLTGLENP 416
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+NVIL R W+H M+A+PST
Sbjct: 417 GRILSGFNGSSTTSLGNIILTVQAGPVTLNVQFSVVQDLSPFNVILRRTWLHYMKAIPST 476
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLALKET 205
HQ++ + G + G Q A C +A +ET
Sbjct: 477 YHQMVSFLIKDGQVNLYGSQLAARQCYQIA-RET 509
>gi|147838114|emb|CAN69666.1| hypothetical protein VITISV_013633 [Vitis vinifera]
Length = 446
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 76/127 (59%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D I PH DA ++S+ IG+ VKRIL+D+G+S ++L + +++M LE ++
Sbjct: 315 FPPVDPTRILQPHRDAFILSLGIGDFDVKRILVDSGNSTDLLQASIIKQMGLELSGLENP 374
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
Q L +G T S G + L V S L F VV+ SP+N ILGR W+H M+ +PST
Sbjct: 375 GQILSRFNGAATTSLGDVVLPVQVGSVILNVQFSVVEDLSPFNAILGRTWLHYMKVIPST 434
Query: 172 CHQVLCY 178
HQ++ +
Sbjct: 435 YHQMVSF 441
>gi|147856922|emb|CAN82831.1| hypothetical protein VITISV_005335 [Vitis vinifera]
Length = 531
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 85/150 (56%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL++ GSS +++ + V MR ++
Sbjct: 361 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVNPGSSADLVQASVVSHMRHSLIGLENP 420
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I LLV A +L F V++ SP+NVILGR W+H M+A+ ST
Sbjct: 421 RRILSGFNGSSTTSLGDIVLLVQAGPVTLNVQFSVIQDLSPFNVILGRTWLHHMKAILST 480
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T ++ Q A C +A
Sbjct: 481 YHQMVSFLTKDAQIDLYSIQLAARQCYQIA 510
>gi|147781053|emb|CAN65844.1| hypothetical protein VITISV_031777 [Vitis vinifera]
Length = 345
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 81/146 (55%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M ++
Sbjct: 158 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLTGLENP 217
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L +G T S G I L V +L F VV+ SP+NVILGR W+H M+A+PST
Sbjct: 218 GRILSRFNGSSTTSLGDIVLPVQTGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 277
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWAC 197
HQ++ + T G ++ G Q C
Sbjct: 278 YHQMVSFLTNDGQIDLHGSQLATRQC 303
>gi|147807779|emb|CAN68845.1| hypothetical protein VITISV_032037 [Vitis vinifera]
Length = 526
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 83/150 (55%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+ IL+D GSS +++ + V M ++
Sbjct: 356 FPPVDPTRTLQPHRDALILSLEIGDFDVRCILVDPGSSADLVQASVVGHMGHSLAGLENP 415
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+ +PST
Sbjct: 416 RRILSGFNGSSTTSLGDIILSVQAGPITLNVQFSVVQELSPFNVILGRTWLHYMKVIPST 475
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ Q A C +A
Sbjct: 476 YHQMVSFLTNEGQTDLYDSQLAARQCYQIA 505
>gi|147821431|emb|CAN72343.1| hypothetical protein VITISV_002338 [Vitis vinifera]
Length = 482
Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 82/142 (57%), Gaps = 6/142 (4%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQP---LIGLS 119
PH DAL++S++IG+ V+RIL+D GSS +++ + + M + E P L G +
Sbjct: 323 PHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHM---GHSLAGLENPGXILSGFN 379
Query: 120 GIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQ 179
G T S G I L V A +L F VV+ SP+N+ILGR +H M+A+PST HQ++ +
Sbjct: 380 GSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNIILGRTXLHYMKAIPSTYHQMVSFL 439
Query: 180 TIYGIEEIRGDQATAWACAVLA 201
T G ++ G Q A C +A
Sbjct: 440 TNEGQTDLYGSQLAARQCYQIA 461
>gi|147839217|emb|CAN70205.1| hypothetical protein VITISV_028313 [Vitis vinifera]
Length = 481
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 84/149 (56%), Gaps = 6/149 (4%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P DL I PH DAL++S++IG+ V+RIL+D GSS +++ + V M + I L
Sbjct: 335 FPPIDLTQILHPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVSHM--GHNLIGL- 391
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A L F VV+ SP+NVILG W+H M+ +
Sbjct: 392 ENPGRILFGFNGSSTTSLGDIVLPVQAGPVILNVQFSVVQDLSPFNVILGCTWLHYMKVI 451
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
PST HQ++ + T ++ G Q A C
Sbjct: 452 PSTYHQMVSFLTKDRQIDLYGSQLAARQC 480
>gi|147852095|emb|CAN82275.1| hypothetical protein VITISV_040384 [Vitis vinifera]
Length = 527
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 84/153 (54%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D G+S +++ + V M +
Sbjct: 357 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGNSTDLVQASVVGHM---GHSLAGL 413
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G + T S G I L V A +L F VV+ SP+NVILG W+H M+A+
Sbjct: 414 ENPGRILSGFNRSSTTSLGDIILSVQAGPVTLNVQFSVVQELSPFNVILGCTWLHYMKAI 473
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 474 PSTYHQMVSFLTNDGQTDLYGSQLAARQCYQIA 506
>gi|147855835|emb|CAN79633.1| hypothetical protein VITISV_038059 [Vitis vinifera]
Length = 549
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 82/148 (55%)
Query: 54 PQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQ 113
P D PH DAL++S++IG V+RIL+D GSS +++ + V M ++ +
Sbjct: 381 PVDSTRTLQPHRDALILSLEIGEFDVRRILVDPGSSTDLVQASVVGHMGHSLVGLENPGR 440
Query: 114 PLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCH 173
L G +G T S G I L V +L F VV+ SP+NVILG W+H M+A+PST H
Sbjct: 441 ILSGFNGSSTTSLGDIILPVQDGPVTLNVQFSVVQELSPFNVILGHTWLHYMKAIPSTYH 500
Query: 174 QVLCYQTIYGIEEIRGDQATAWACAVLA 201
Q++ + T G ++ G Q A C +A
Sbjct: 501 QMVSFLTNEGQIDLYGSQLAARQCYQIA 528
Score = 36.2 bits (82), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A ++E C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQIEACSMDAVLQIFKRSICPGTPFFESLAK 158
>gi|147844598|emb|CAN80065.1| hypothetical protein VITISV_035227 [Vitis vinifera]
Length = 471
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 84/146 (57%)
Query: 56 DLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPL 115
D I PH +AL++S+ +G+ V+RILID GSS ++L + + M + ++ + L
Sbjct: 305 DPTRILQPHREALILSLGMGDFDVRRILIDPGSSTDLLQTSVIGHMGRDLSGLENLGRIL 364
Query: 116 IGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQV 175
G +G+VT S I L V A S +L FLVV+ SP+N ILG W+H M+ +PST +Q+
Sbjct: 365 SGFNGVVTTSLRDIVLPVQAGSVTLNVQFLVVQDLSPFNAILGLTWLHYMKVIPSTYYQM 424
Query: 176 LCYQTIYGIEEIRGDQATAWACAVLA 201
+ + T G ++ G Q C +A
Sbjct: 425 VSFLTEDGQIDLHGSQLVVRQCYQIA 450
>gi|147769742|emb|CAN60950.1| hypothetical protein VITISV_000873 [Vitis vinifera]
Length = 509
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 84/150 (56%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M ++
Sbjct: 339 FPPVDPNRTLQPHCDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHTLTGLENP 398
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G + T S G I L V A +L F VV+ SP+NVILG W+H M+A+PST
Sbjct: 399 GRILSGFNRSSTTSLGDIVLSVQADPVTLNVQFSVVQELSPFNVILGCTWLHYMKAIPST 458
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 459 YHQMVSFLTNDGQIDLYGSQLAARQCYQIA 488
>gi|147853749|emb|CAN79563.1| hypothetical protein VITISV_020823 [Vitis vinifera]
Length = 536
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 81/139 (58%), Gaps = 6/139 (4%)
Query: 66 DALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQP---LIGLSGIV 122
+AL++S++IG+ V+RIL+D GSS +++ + V M + E P L G +G
Sbjct: 380 NALILSLEIGDFDVRRILVDPGSSADLIQASVVSHM---GHSLAGLENPGRILSGFNGSS 436
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
T S G I L V A +L F VV+ SP+N+ILGR W+H M+A+PST HQ++ + T
Sbjct: 437 TTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPSTYHQMVSFLTNE 496
Query: 183 GIEEIRGDQATAWACAVLA 201
G ++ G Q A C +A
Sbjct: 497 GQIDLYGSQLAARQCYQIA 515
Score = 37.0 bits (84), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQVEACSMDAVLQIFKRSICPGTPFFESLAK 158
>gi|147846809|emb|CAN82731.1| hypothetical protein VITISV_022899 [Vitis vinifera]
Length = 506
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 82/150 (54%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH +A ++S++IG+ V+RILID GSS +++ + V M ++
Sbjct: 336 FPPVDSTRTLQPHRNAFILSLEIGDFDVRRILIDPGSSADLVQASIVSHMGHSLTDLENP 395
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A + F VV+ SP+N+ILGR W+H M+A+PST
Sbjct: 396 RRILSGFNGSSTTSLGDIVLSVQAGPVTRNVQFSVVQKLSPFNIILGRTWLHYMKAIPST 455
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ Q C +A
Sbjct: 456 YHQLVSFLTNEGQIDLYSSQLAVRQCYQIA 485
Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + FKR + PFFESL++
Sbjct: 71 ESLREFVKRFGQAVLQVEACSMDAVLQIFKRSICPGTPFFESLAK 115
>gi|147844812|emb|CAN80646.1| hypothetical protein VITISV_028506 [Vitis vinifera]
Length = 378
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 6/175 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D + PH DAL++++ I V+RIL+D GS N+L + +++M ++
Sbjct: 173 FPPVDPVRVLQPHRDALILTLGIDGFDVRRILVDPGSLANLLQVSVIKQMGFMPSNLENL 232
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L+G + T S I L + +L FL+V+ SP+N ILGR W+H M+A+PST
Sbjct: 233 GRILLGFNEASTTSIEDIVLPIQVGPITLNVQFLMVEDLSPFNAILGRAWLHNMKAIPST 292
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLALK------ETKRKDSNFENQAKQDV 220
HQ++ + T G ++ G Q A C +A + KRK Q Q+V
Sbjct: 293 YHQMVSFITKNGQIDLYGIQLAARQCYQVAREVYIDDMVVKRKTREEHTQHLQEV 347
>gi|147802761|emb|CAN70850.1| hypothetical protein VITISV_039360 [Vitis vinifera]
Length = 501
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 80/141 (56%), Gaps = 6/141 (4%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M +
Sbjct: 363 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVSHM---GHSLACL 419
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A S +L F VV+ SP+N+IL R W+H M+ +
Sbjct: 420 ENPGRILSGFNGSSTTSLGDIVLPVQAGSITLNVQFSVVQELSPFNIILRRTWLHYMKVI 479
Query: 169 PSTCHQVLCYQTIYGIEEIRG 189
PST HQ++ + T G ++ G
Sbjct: 480 PSTYHQMVSFLTNEGQIDLYG 500
>gi|147819382|emb|CAN71221.1| hypothetical protein VITISV_043564 [Vitis vinifera]
Length = 1145
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 77/127 (60%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F P D + PH DAL++++ IG+ VKRIL+D+GSS ++L + V++M ++
Sbjct: 304 IVFSPIDPTRVLQPHRDALILTMGIGDFDVKRILVDSGSSADLLQVSMVKQMGFIPSSLE 363
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ L G +G T S G I L + A +L F VV+ SP+N IL R W+H M+A+P
Sbjct: 364 NLGRILSGFNGASTTSLGDIILPIQAGPVTLNVLFSVVEDLSPFNAILRRTWLHSMKAIP 423
Query: 170 STCHQVL 176
ST HQ++
Sbjct: 424 STYHQMI 430
>gi|147841593|emb|CAN64232.1| hypothetical protein VITISV_008999 [Vitis vinifera]
Length = 388
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 82/160 (51%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F D I PH DA ++ + I + V++IL+D GSS+N+L + +++M ++
Sbjct: 216 ITFPSVDPNRILQPHKDAFILMLGINDFDVRQILVDPGSSINLLQVSVIKQMGFSPSSLE 275
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q L G +G T S G I L V L F +V SP+N ILGR W+H M+ +P
Sbjct: 276 NLGQILSGFNGASTTSLGDIVLPVQVGPVILSVQFSIVNDLSPFNAILGRAWLHGMKVIP 335
Query: 170 STCHQVLCYQTIYGIEEIRGDQATAWACAVLALKETKRKD 209
ST HQ++ Y T ++ G Q C +A + D
Sbjct: 336 STYHQMVSYLTEDRQIDLYGSQLANRKCYQVAREAKSNSD 375
>gi|147789540|emb|CAN69591.1| hypothetical protein VITISV_001704 [Vitis vinifera]
Length = 429
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 80/142 (56%)
Query: 60 IQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLS 119
I PH DAL++ + IG+ V+RIL+ GSS ++L + +++M L ++ L G +
Sbjct: 267 ILQPHRDALIMFLGIGDFDVRRILVYPGSSADLLQVSAIKQMGLVPSSLENMRWILSGFN 326
Query: 120 GIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQ 179
G S G + L V A L F VV+ SP+N ILGR W+H M+A+PST HQ++ +
Sbjct: 327 GATITSLGDVVLSVQAGPIILNVQFSVVEDLSPFNAILGRTWLHYMKAIPSTYHQMVSFL 386
Query: 180 TIYGIEEIRGDQATAWACAVLA 201
T G ++ G Q A C +A
Sbjct: 387 TEDGHIDLYGSQLAARQCYQIA 408
>gi|147860446|emb|CAN80435.1| hypothetical protein VITISV_001562 [Vitis vinifera]
Length = 529
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 83/153 (54%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D H DAL++S++IG+ V RIL+D SS +++ + V M +
Sbjct: 359 FPPVDPTRTLQXHRDALILSLEIGDFDVWRILVDPDSSADLVQASVVGHM---GHSLXGL 415
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+
Sbjct: 416 ENPGXILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAI 475
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 476 PSTYHQMVSFLTNDGQIDLYGSQLXARQCYQIA 508
Score = 36.6 bits (83), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQVEACSMDAVLQIFKRSICPXTPFFESLAK 158
>gi|147835108|emb|CAN76905.1| hypothetical protein VITISV_005126 [Vitis vinifera]
Length = 477
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 81/139 (58%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIV 122
PH D L++S+++ + V+RIL+D GSS +++ + V M ++ ++ L G +G
Sbjct: 318 PHRDTLILSLEVVDFDVRRILVDPGSSADLVQASVVSHMGHSLAGLENPKRILSGFNGSS 377
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
T S G I L V A +L F VV+ SP+NVILGR W+H M+ +PST HQ++ + T
Sbjct: 378 TTSLGDIVLPVQAGPVTLNVQFSVVQDLSPFNVILGRTWLHYMKVIPSTYHQMVSFLTND 437
Query: 183 GIEEIRGDQATAWACAVLA 201
G ++ G Q A C +A
Sbjct: 438 GQIDLYGSQLAARQCYQIA 456
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + FKR + PFFESL++
Sbjct: 71 ESLREFVKRFGQAVLQVEACSMDXVLQIFKRSICPGTPFFESLAK 115
>gi|147803264|emb|CAN64381.1| hypothetical protein VITISV_024226 [Vitis vinifera]
Length = 471
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 85/156 (54%)
Query: 56 DLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPL 115
D + PH DAL++++ +G+ VKRIL+D GS ++L A +++M ++ + L
Sbjct: 316 DPTQVLQPHRDALILTLGVGDFDVKRILVDPGSFADLLQVAVIKQMGFIPSSLENPGRTL 375
Query: 116 IGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQV 175
G + T S G +TL V A L F VV+ SP+NVILGR W+H M+ +PST HQ+
Sbjct: 376 SGFNSSSTTSLGDVTLPVQAGPVILNVLFSVVEDLSPFNVILGRTWLHGMKVIPSTYHQM 435
Query: 176 LCYQTIYGIEEIRGDQATAWACAVLALKETKRKDSN 211
+ + T G ++ Q A C +A K D +
Sbjct: 436 VSFITQDGQIDLYRSQLAARQCYQIASKAGPSADRD 471
>gi|147815943|emb|CAN77143.1| hypothetical protein VITISV_038338 [Vitis vinifera]
Length = 605
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 90/167 (53%), Gaps = 7/167 (4%)
Query: 56 DLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPL 115
D + PH DAL++++ +G+ VKRIL+D GSS ++L A +++M ++ + L
Sbjct: 439 DPARVLHPHRDALILTLGVGDFDVKRILVDLGSSADLLQVAVIKQMGFIPSSLENPGRTL 498
Query: 116 IGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQV 175
G +G T S G +TLLV +L F VV+ SP+N ILG W+H M+ +PST HQ+
Sbjct: 499 SGFNGSSTTSLGDVTLLVQTGPVTLNVLFFVVEDLSPFNAILGCTWLHGMKDIPSTYHQM 558
Query: 176 LCYQTIYGIEEIRGDQATAWACAVL-------ALKETKRKDSNFENQ 215
+ + T G ++ Q A C + A +E K++ NQ
Sbjct: 559 VSFITQDGQIDLYRSQLAARQCYQIDREAGPSADREHSPKEATASNQ 605
>gi|147773532|emb|CAN76263.1| hypothetical protein VITISV_000566 [Vitis vinifera]
Length = 508
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 80/157 (50%), Gaps = 26/157 (16%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL +S++IG+ V+RIL+D GS
Sbjct: 357 FPPVDPTRTLQPHRDALTLSLQIGDFDVRRILVDPGS----------------------L 394
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+N+ILGR W+H M+A+
Sbjct: 395 ENPGRILSGFNGSSTTSLGDIVLPVQADPVTLNVQFSVVQELSPFNIILGRTWLHYMKAI 454
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLALKET 205
PST HQ++ + T G ++ G Q + C +A +ET
Sbjct: 455 PSTYHQMVSFLTNEGQTDLYGSQLASRQCYQIA-RET 490
>gi|147771452|emb|CAN73655.1| hypothetical protein VITISV_002495 [Vitis vinifera]
Length = 440
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 82/146 (56%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M ++
Sbjct: 294 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSTDLVQASVVSHMGHSLTGLENP 353
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L + A +L F VV+ SP+N+ILGR +H M+ +PST
Sbjct: 354 GRILSGFNGSSTTSLGDIVLQIQAGPITLNVQFSVVQELSPFNIILGRTCLHYMKVIPST 413
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWAC 197
H+++ + T G ++ G Q A C
Sbjct: 414 YHKMVSFLTNDGQIDLYGSQLAARQC 439
>gi|147816415|emb|CAN70763.1| hypothetical protein VITISV_028036 [Vitis vinifera]
Length = 506
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 83/150 (55%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + + + ++
Sbjct: 336 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDLGSSADLVQASVMSHIGHTLTGLENP 395
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L V + SP+NVILG W+H M+A+PST
Sbjct: 396 GRILSGFNGSSTTSLGDIVLPVQAGPVTLNVQSSVAQELSPFNVILGHTWLHYMKAIPST 455
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 456 YHQMVSFLTNDGQIDLYGSQLAARQCYQIA 485
>gi|147781482|emb|CAN64960.1| hypothetical protein VITISV_006740 [Vitis vinifera]
Length = 502
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 81/153 (52%), Gaps = 18/153 (11%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + + M + +
Sbjct: 344 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHM---EHSLAGL 400
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A S P+NVILGR W+H M+A+
Sbjct: 401 ENPGRILSGFNGSSTTSLGDIILPVQAGPLS------------PFNVILGRTWLHYMKAI 448
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 449 PSTYHQLVSFLTNEGQTDLYGSQLAARQCYQIA 481
>gi|147811674|emb|CAN72670.1| hypothetical protein VITISV_028693 [Vitis vinifera]
Length = 493
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 75/125 (60%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GS +++ + V +M ++
Sbjct: 339 FPPVDPTRTLQPHCDALILSLEIGDFDVRRILVDPGSLADLVQASVVGRMGHSLTGLENP 398
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+PST
Sbjct: 399 GEILSGFNGSSTTSLGDIILTVQAGPINLNVQFSVVQDLSPFNVILGRTWLHYMKAIPST 458
Query: 172 CHQVL 176
HQ++
Sbjct: 459 YHQMV 463
Score = 36.2 bits (82), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + FKR + PFFESL++
Sbjct: 74 ESLREFVKRFGQAVLQVEACSMVAVLQIFKRSICPGTPFFESLAK 118
>gi|147771526|emb|CAN62496.1| hypothetical protein VITISV_027484 [Vitis vinifera]
Length = 526
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 83/150 (55%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D I PH +A ++S++IG+ V+RIL+D GS +++ + V M ++
Sbjct: 356 FPPVDPTRILQPHRNAFILSLEIGDFDVRRILVDPGSLTDLVQASVVSHMGHSLTGLENP 415
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+NV+LGR +H M+ +PST
Sbjct: 416 GRILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQDLSPFNVVLGRTRLHYMKVIPST 475
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 476 YHQMVSFLTNDGQIDLYGSQLAARQCYQIA 505
>gi|147839825|emb|CAN70557.1| hypothetical protein VITISV_036328 [Vitis vinifera]
Length = 549
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 81/146 (55%)
Query: 56 DLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPL 115
D I PH D ++S++I + V+RIL+D GSS +++ + + M ++ + L
Sbjct: 383 DPTRILHPHRDVFILSLEIRDFDVRRILVDPGSSADLVQASVISHMGRSLTGLENPGRIL 442
Query: 116 IGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQV 175
G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+PST HQ+
Sbjct: 443 SGFNGSSTTSLGDIVLSVQADPVTLNVQFSVVQDLSPFNVILGRTWLHYMKAIPSTYHQM 502
Query: 176 LCYQTIYGIEEIRGDQATAWACAVLA 201
+ + T G ++ G Q C +A
Sbjct: 503 VSFLTKDGQIDLYGIQLAVRQCYQIA 528
>gi|147865017|emb|CAN83240.1| hypothetical protein VITISV_021676 [Vitis vinifera]
Length = 549
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 83/144 (57%), Gaps = 1/144 (0%)
Query: 58 KLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG 117
+++QS H D L++S++IG+ V+RIL+D GSS +++ + + M ++ + L G
Sbjct: 386 RILQS-HRDVLILSLEIGDFEVRRILVDPGSSTDLVQASVISHMGHSLTGLENPGRILSG 444
Query: 118 LSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLC 177
+G T S G L V A +L F VV+ SP+N+ILGR W+H M+ +PST HQ++
Sbjct: 445 FNGASTTSLGDTVLSVQAGLVTLNLQFSVVQDLSPFNIILGRTWLHYMKVIPSTYHQMVS 504
Query: 178 YQTIYGIEEIRGDQATAWACAVLA 201
+ T G + G Q A C +A
Sbjct: 505 FLTKDGQINLYGSQLAARQCYQIA 528
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 1 MGRVETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
M E+LK +++RF A +VE C + FKR + + PFFESL++
Sbjct: 110 MHNNESLKEFVKRFGQAVLQVEACSMDAVLQIFKRSICPSTPFFESLAK 158
>gi|147858743|emb|CAN82904.1| hypothetical protein VITISV_007040 [Vitis vinifera]
Length = 479
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 79/150 (52%), Gaps = 24/150 (16%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS N++
Sbjct: 333 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSANLVQ----------------- 375
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ + T S G I L V A S +L F VV+ SP+N+ILGR W+H M+A+PST
Sbjct: 376 -------ASVSTTSLGDIILPVQAGSITLNVQFSVVQELSPFNIILGRTWLHYMKAIPST 428
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
+Q++ + T G ++ G Q A C +A
Sbjct: 429 YYQMVSFLTNDGQVDLYGSQLAARQCYQIA 458
>gi|147862525|emb|CAN81502.1| hypothetical protein VITISV_030487 [Vitis vinifera]
Length = 682
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 81/143 (56%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D I PH DAL++S++IG+ V+RI + G+S +++ + + M +++
Sbjct: 539 FPPVDPTRILQPHRDALILSLEIGDFDVRRIRVYPGNSTDLVQASVISHMGRSLTGLEIP 598
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ S +NVILGR W+H M+ +PST
Sbjct: 599 GRILSGFNGASTTSLGDIVLPVQAGPVTLNVQFSVVQDLSSFNVILGRTWLHYMKVIPST 658
Query: 172 CHQVLCYQTIYGIEEIRGDQATA 194
HQ++ + T G ++ G Q A
Sbjct: 659 YHQMVSFLTKDGQVDLYGSQLAA 681
>gi|147835953|emb|CAN63969.1| hypothetical protein VITISV_007954 [Vitis vinifera]
Length = 451
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 80/142 (56%)
Query: 56 DLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPL 115
DL + PH DALV+++ I + VKRIL+D GSS ++L + V++M ++ + L
Sbjct: 285 DLARVLQPHRDALVMTLGIRDFDVKRILVDPGSSADLLQVSVVKQMGFIPSSLENPGRML 344
Query: 116 IGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQV 175
G +G T S G + L + A L F VV+ P+N ILGR W+H M+A+ ST HQ+
Sbjct: 345 SGFNGASTTSLGDVILSIQAGPVILNVLFSVVEDLFPFNAILGRMWLHSMKAISSTYHQM 404
Query: 176 LCYQTIYGIEEIRGDQATAWAC 197
+ + T G ++ G Q A C
Sbjct: 405 VSFITQDGQVDLYGSQLAARQC 426
>gi|147781722|emb|CAN76498.1| hypothetical protein VITISV_004732 [Vitis vinifera]
Length = 467
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 83/147 (56%), Gaps = 7/147 (4%)
Query: 58 KLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQP--- 114
+L+Q PH DAL++S++I N V+RIL+D GSS +++ + + M + E P
Sbjct: 304 RLLQ-PHRDALILSLEIRNFDVRRILVDPGSSTDLVQASVISHM---GHSLIGLENPGRI 359
Query: 115 LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
L G +G T S G I L V +L F VV+ SP+NVILGR W+H M+ + ST HQ
Sbjct: 360 LSGFNGASTTSLGDIVLPVQVGPVTLNVQFSVVQDLSPFNVILGRTWLHYMKVIHSTYHQ 419
Query: 175 VLCYQTIYGIEEIRGDQATAWACAVLA 201
++ + T G ++ G Q A C +A
Sbjct: 420 MVSFLTKDGQVDLYGSQLAARQCYQIA 446
>gi|147862848|emb|CAN78786.1| hypothetical protein VITISV_006287 [Vitis vinifera]
Length = 525
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 77/150 (51%), Gaps = 24/150 (16%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSSV+++ + V M
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSVDLVQASVVSHMGHN------- 431
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
I L V A +L F VV+ SP+N+ILGR W+H M+A+PST
Sbjct: 432 -----------------IVLPVQAGPVNLNVQFSVVQELSPFNIILGRAWLHDMKAIPST 474
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 475 YHQMVSFLTNEGQIDLYGSQLAARQCYQIA 504
>gi|359488149|ref|XP_003633709.1| PREDICTED: uncharacterized protein LOC100853021 [Vitis vinifera]
Length = 587
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 82/150 (54%)
Query: 60 IQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLS 119
I PH DAL+ S+ IG+ V+RIL++ SS ++L + V++M L ++ + L G +
Sbjct: 123 ILQPHQDALIPSLGIGDFDVRRILVNPSSSADLLQVSVVKQMGLVPSSLENPRRVLSGFN 182
Query: 120 GIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQ 179
G T G + L V A +L F +V+ SP+N IL R W+H M+A+PST HQ++ Y
Sbjct: 183 GASTTFLGDVVLPVQAGPITLNVQFPIVEDLSPFNAILRRTWLHYMKAIPSTYHQMVSYL 242
Query: 180 TIYGIEEIRGDQATAWACAVLALKETKRKD 209
T ++ G Q A C +A + D
Sbjct: 243 TEDEQIDLYGSQLAARQCYQIAREAGSSGD 272
>gi|147769223|emb|CAN71857.1| hypothetical protein VITISV_012968 [Vitis vinifera]
Length = 781
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 79/138 (57%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H DAL++S++IG+ V+RIL+D GSS +++ + V M ++ + L G +G T
Sbjct: 291 HHDALILSLEIGDFDVRRILVDPGSSTDLVQASVVSHMGHNLTGLENLGRILSGFNGSTT 350
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S I L V A +L F VV+ SP+NVILGR W+H M+ +PST +Q++ + T G
Sbjct: 351 TSLRDIVLPVKAGPVTLNLQFSVVQDLSPFNVILGRTWLHYMKVIPSTYYQMVSFLTKDG 410
Query: 184 IEEIRGDQATAWACAVLA 201
++ Q A C +A
Sbjct: 411 QIDLYDSQLAARQCYQIA 428
>gi|147801549|emb|CAN63601.1| hypothetical protein VITISV_010205 [Vitis vinifera]
Length = 295
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 76/129 (58%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F P D + PH DA++++++I + V++I +D SS+++L + ++M ++
Sbjct: 123 ITFPPVDPNRVLQPHQDAIILTLRISDFDVRQIFVDPSSSIDLLQMSAFKQMEFPPSALE 182
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ L G +G T S G I L V A+ L FLV++ SP+N I+ R W+H M+++P
Sbjct: 183 NLRRILSGFNGAFTTSLGDIMLPVQAEPVILNIQFLVIEDLSPFNAIMERTWLHGMKSIP 242
Query: 170 STCHQVLCY 178
S HQ++ Y
Sbjct: 243 SIYHQMVSY 251
>gi|147863289|emb|CAN80483.1| hypothetical protein VITISV_015090 [Vitis vinifera]
Length = 441
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 78/139 (56%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIV 122
PH DAL++S++IG+ V+RIL+D GSS +++ + M ++ + L G +
Sbjct: 282 PHRDALIMSLEIGDFDVRRILVDPGSSTDLIQASVASHMGHSLTGLENPGRILSGFNRSS 341
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
T S G I L V A +L F VV+ P+N+ILGR W+H M+ +PST HQ++ + T
Sbjct: 342 TTSLGDIVLPVQAGPVTLNVQFSVVQELLPFNIILGRTWLHYMKVIPSTYHQMVSFLTSE 401
Query: 183 GIEEIRGDQATAWACAVLA 201
G ++ Q A C +A
Sbjct: 402 GQIDLYDSQLAARQCYQIA 420
>gi|147823329|emb|CAN70869.1| hypothetical protein VITISV_029059 [Vitis vinifera]
Length = 501
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 85/153 (55%), Gaps = 6/153 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D I PH + L++S+ +G+ V+ IL+D G+S +++ + + M ++ I L
Sbjct: 331 FPPVDPTRILQPHRETLILSLGMGDFDVRGILVDPGNSADLVQASVISHM--GRNLIGL- 387
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L +G T S G I L V +L F VV+ SP+NVILGR W+H M+ +
Sbjct: 388 ENPGRILSRFNGTTTTSLGDIVLPVQGGPVTLNVQFSVVQDLSPFNVILGRIWLHHMKVI 447
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G+Q A C +A
Sbjct: 448 PSTYHQMVSFLTEDGQIDLYGNQLAARQCYQIA 480
>gi|147805360|emb|CAN71958.1| hypothetical protein VITISV_011548 [Vitis vinifera]
Length = 528
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 76/131 (58%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
AL++S+++G+ V+ IL+D GSSV+ L + + M + ++ + L G +G T S
Sbjct: 373 ALILSLEMGDFDVRCILVDPGSSVDFLQASVISHMGRDLTGLENLGRILSGFNGAATTSL 432
Query: 127 GVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEE 186
G I L V A +L F VV+ SP+NVILGR W+H M+ +PST HQ++ + G +
Sbjct: 433 GDIVLPVQADPVTLNVQFSVVQDLSPFNVILGRTWLHYMKVIPSTYHQMVSFLAEDGQID 492
Query: 187 IRGDQATAWAC 197
+ G Q A C
Sbjct: 493 LYGSQLAARQC 503
>gi|147788947|emb|CAN64846.1| hypothetical protein VITISV_014510 [Vitis vinifera]
Length = 729
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 84/151 (55%), Gaps = 6/151 (3%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIV 122
PH DAL++S++IG+ V+RIL+D GSS +++ + + M ++ + L G +G
Sbjct: 491 PHRDALILSLEIGDFDVRRILVDLGSSADLVQASVISHMGHSLTSLENPGRILSGFNGSS 550
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
T S I L V A +L F VV+ SP+NVILGR W+H M+ +PST HQ++ Y I
Sbjct: 551 TISLEDIVLSVQAGPVTLNIQFSVVQDLSPFNVILGRTWLHYMKVIPSTYHQMVVYPCIL 610
Query: 183 GIEEIR-----GDQATAWACAVLALKETKRK 208
+++R G Q W L++ +K
Sbjct: 611 A-QQLRNHLIGGLQGENWHLDNKYLRQNNKK 640
>gi|5262172|emb|CAB45815.1| putative protein [Arabidopsis thaliana]
gi|7268845|emb|CAB79049.1| putative protein [Arabidopsis thaliana]
Length = 853
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 42 PFFESLSE--VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVE 99
P E LS+ + F +D IQ PH+DALVI + + + V+RILID GSSVN++ T+
Sbjct: 453 PEAEPLSQEPIIFTSEDASGIQHPHNDALVIKLVMEDFDVERILIDTGSSVNLMFLKTLF 512
Query: 100 KMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGR 159
KM + + KI +P+ G G S G I L V + T F+V+ + YN ILG
Sbjct: 513 KMGISESKIMPKIRPMTGYDGEAKMSIGEIKLQVQVGGITQKTKFVVIDSEPIYNAILGS 572
Query: 160 QWIHKMRAVPST 171
WI+ M+A+PST
Sbjct: 573 PWIYSMKAIPST 584
>gi|147833065|emb|CAN77474.1| hypothetical protein VITISV_007258 [Vitis vinifera]
Length = 537
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 79/150 (52%), Gaps = 12/150 (8%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH D L++S++IG+ V+RIL+D GSS +++ + V M ++
Sbjct: 379 FPPVDPTRTLQPHRDTLILSLEIGDFDVRRILVDPGSSADLIQASVVSHMGHSLTGLENP 438
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A S P+N+ILGR W+H M+A+PST
Sbjct: 439 GRILSGFNGSSTTSLGDIVLPVQAGPLS------------PFNIILGRTWLHYMKAIPST 486
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 487 YHQMVSFLTKDGQIDLYGSQLAARQCYQIA 516
>gi|147766522|emb|CAN69878.1| hypothetical protein VITISV_015633 [Vitis vinifera]
Length = 502
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 80/150 (53%), Gaps = 24/150 (16%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V++M
Sbjct: 356 FPPVDPARTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVDRM---------- 405
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
G + I+ G +TL V F VV+ SP+NVILGR W+H M+ +PST
Sbjct: 406 -----GHNIILPVQAGPVTLNV---------QFSVVQELSPFNVILGRTWLHYMKVIPST 451
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 452 YHQMVSFLTNDGQIDLYGSQLAARQCYQIA 481
>gi|147855792|emb|CAN80728.1| hypothetical protein VITISV_034200 [Vitis vinifera]
Length = 422
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 79/150 (52%), Gaps = 12/150 (8%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D SS +++ + V M ++
Sbjct: 264 FAPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPSSSADLVQASVVAHMGHSLAGLENL 323
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A SP+N+ILGR W+H M+A+PST
Sbjct: 324 GRILSGFNGSSTTSLGDIILPVQAG------------PLSPFNIILGRTWLHYMKAIPST 371
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 372 YHQMVSFLTNEGQIDLYGSQLAARQCYQIA 401
>gi|147779381|emb|CAN65566.1| hypothetical protein VITISV_030138 [Vitis vinifera]
Length = 408
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIV 122
P D + + N V+RIL+D+GSS N+L +++M ++ + L+G +G
Sbjct: 249 PIDGVITFPPESMNFNVRRILVDSGSSANLLQVFVIKQMGFSPSNLENPGRILLGFNGAS 308
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
T S G I L A +L FLVV+ P+NVILG W+H M+ +PST HQ++ Y T
Sbjct: 309 TTSLGDIVLPAQAGLITLNMSFLVVEDLCPFNVILGHSWLHGMKVIPSTYHQMVSYLTED 368
Query: 183 GIEEIRGDQATAWACAVLALKETKRKDSN 211
G + G Q A C +A + +D++
Sbjct: 369 GHISLYGSQLAARQCYQVAPEVGSSRDND 397
>gi|147775563|emb|CAN78198.1| hypothetical protein VITISV_037292 [Vitis vinifera]
Length = 522
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 77/134 (57%), Gaps = 6/134 (4%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQP---LIGLSG 120
H DAL++S++IG+ V+RIL+D GSS +++ + V M + E P L +G
Sbjct: 391 HRDALILSLEIGDFDVRRILVDPGSSADLVQASVVSHM---GHSLAGLENPGRILSEFNG 447
Query: 121 IVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQT 180
T S G I L V A +L F VV+ SP+N+ILGR W++ M+ +PST HQ++ + T
Sbjct: 448 SSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNIILGRTWLYYMKVIPSTYHQMMSFLT 507
Query: 181 IYGIEEIRGDQATA 194
G ++ G Q A
Sbjct: 508 NEGQIDLYGSQLAA 521
Score = 37.0 bits (84), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQVEACSMDAVLQIFKRSICPGTPFFESLAK 158
>gi|38194929|gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
Length = 1859
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 92/162 (56%), Gaps = 5/162 (3%)
Query: 47 LSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQD 106
+ ++F +D I DD +VI+++I + ++L+D GSSV+IL T +KM++ +
Sbjct: 619 IPPITFTDEDFTAIDPSQDDPMVITVEIDKFAIAKVLVDQGSSVDILYWETFKKMKIPEA 678
Query: 107 KIKLFEQPLIGLSGIVTNSDGVITLLVIAK----SYSLLTDFLVVKATSPYNVILGRQWI 162
+I+ + + ++G S ++ G I L S ++ +L+V A + YN++LGR I
Sbjct: 679 EIQPYNEQIVGFSRERVDTKGFIDLYTTFGDDYLSKTINIRYLLVNANTSYNILLGRPSI 738
Query: 163 HKMRAVPSTCHQVLCYQTIYG-IEEIRGDQATAWACAVLALK 203
++++A+ ST H + + ++ G I + DQ TA C V +LK
Sbjct: 739 NRLKAIVSTPHLAMKFPSVNGDIATVHIDQKTARECYVASLK 780
>gi|147866484|emb|CAN79432.1| hypothetical protein VITISV_023379 [Vitis vinifera]
Length = 536
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 80/153 (52%), Gaps = 19/153 (12%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + + M +
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHM---GHGLAGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V V+ SP+N+ILGR W+H M+A+
Sbjct: 436 ENPGRILSGFNGSSTTSLGDIILPV-------------VQELSPFNIILGRTWLHYMKAI 482
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ Q A C +A
Sbjct: 483 PSTYHQMVSFLTNEGQTDLYXSQLAARQCYQIA 515
>gi|147819530|emb|CAN65354.1| hypothetical protein VITISV_012645 [Vitis vinifera]
Length = 381
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 79/148 (53%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F D + PH D L++++ I + V+RIL+D GSS ++L T +++ ++
Sbjct: 233 ITFPSIDPNRVLHPHQDVLILTLGINDFDVRRILVDLGSSADLLQMFTFKQIGFSSSALE 292
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ L+G +G S G + L V AK L F +V+ S +N I+ R W+H M+ +P
Sbjct: 293 NLRKILLGFNGASMTSLGDVVLPVQAKPVVLNVQFSIVEDLSLFNTIMERTWLHDMKTIP 352
Query: 170 STCHQVLCYQTIYGIEEIRGDQATAWAC 197
ST HQ++ Y T G + G Q A C
Sbjct: 353 STYHQMVSYLTKDGHVNLFGSQLAAQQC 380
>gi|147770553|emb|CAN73415.1| hypothetical protein VITISV_013267 [Vitis vinifera]
Length = 562
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 83/154 (53%), Gaps = 1/154 (0%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++I + ++RIL+ G+S N++ + V M ++
Sbjct: 392 FPPVDPTPTLQPHRDALILSLEIRDFNMRRILVYPGNSANLVQASVVSHMGHSLTNLENP 451
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V +L F V+ S +NVILGR W+H M+ +PST
Sbjct: 452 RRILSGFNGSSTMSLGDIVLPVQVDPITLNVQFSAVQDLSHFNVILGRTWLHYMKVIPST 511
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLALKET 205
HQ++ + T G ++ G Q A C +A +ET
Sbjct: 512 YHQMVSFLTKDGQIDLYGSQLVARQCYQIA-RET 544
>gi|147789466|emb|CAN66604.1| hypothetical protein VITISV_036968 [Vitis vinifera]
Length = 496
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 6/149 (4%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P + PH D L++S++ N ++ IL + GSS +++ + V M +
Sbjct: 326 FPPVNPTRTLHPHRDTLILSLEKRNFDMRCILXNPGSSTDLVQVSVVSHM---GHSLAXL 382
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+N+ILGR W+H M+A+
Sbjct: 383 ENPGRILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNIILGRAWLHYMKAI 442
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
PST HQ++ + T G ++ G Q A C
Sbjct: 443 PSTYHQMVSFLTNEGQIDLYGSQLAARQC 471
>gi|158828306|gb|ABW81181.1| gag-pol20 [Arabidopsis cebennensis]
Length = 498
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 79/136 (58%), Gaps = 1/136 (0%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIV 122
PH+D LVI + IG+ V R+LI+ GS+++++ T+ +M+++ ++ +P++G SG
Sbjct: 2 PHNDPLVIMLAIGDHDVSRVLIETGSTIDVIFRKTLRQMKIDISRVSPTPRPVLGFSGER 61
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
+ G I L V A + + DFLV + YNVI+G W++ MRA+ ST H + + +
Sbjct: 62 LMTLGTIQLPVRAGGITKIVDFLVTDQPTIYNVIMGTPWLNLMRAIASTYHLCVKFSSPN 121
Query: 183 GIEEIRGDQATAWACA 198
G++ G+ CA
Sbjct: 122 GVKRY-GESKRTPGCA 136
>gi|147781767|emb|CAN61299.1| hypothetical protein VITISV_027058 [Vitis vinifera]
Length = 434
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 74/129 (57%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D I H DA ++S++IG+ V+RIL+D GSS +++ + + M ++
Sbjct: 291 FPPVDPTRILQLHRDAFILSLEIGDFDVRRILVDLGSSTDLVQASVISHMGRNLTSLENP 350
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L + A +L F V++ SP+NVILG W+H M+ +PST
Sbjct: 351 GRILSGFNGASTTSLGDIVLPIQADPVTLNVQFSVIQDLSPFNVILGHTWLHYMKVIPST 410
Query: 172 CHQVLCYQT 180
HQ++ + T
Sbjct: 411 YHQMVSFLT 419
>gi|147861980|emb|CAN80914.1| hypothetical protein VITISV_039822 [Vitis vinifera]
Length = 671
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 86/158 (54%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D I PH D L++S+++G+ V+RIL+D+ SSV++L + + M ++
Sbjct: 501 FPPIDPTQILQPHCDTLILSLEMGDFDVRRILVDHSSSVDLLQASVISHMGRNLTGLENP 560
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G + T S G I L V A +L F VV+ S +NVILGR W+H M+ +PST
Sbjct: 561 GRILSGFNEATTTSLGDIVLPVQASLVTLNVQFSVVQNLSLFNVILGRTWLHYMKVIPST 620
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLALKETKRKD 209
HQ++ + T ++ Q A C +A + R++
Sbjct: 621 YHQMVSFLTEDRQIDLYSSQLAARQCYQIAREVGTRQE 658
>gi|116310100|emb|CAH67120.1| H0502G05.11 [Oryza sativa Indica Group]
Length = 2933
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
Query: 40 NHPFFESLSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVE 99
N+P F ++E++F +D + S H+ L I IG ++RILID GS+VNIL ++
Sbjct: 1460 NNPLF--VNEITFADEDNIIEGSDHNRPLYIEGNIGPAHLRRILIDPGSAVNILPVRSLT 1517
Query: 100 KMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGR 159
+ ++ + + G ++ G IT+ + ++S F V++A + Y+ +LGR
Sbjct: 1518 RAGFTTKDLEPTDMVICGFDNQGKSTLGAITVKIQMSTFSFKVHFFVIEANTSYSALLGR 1577
Query: 160 QWIHKMRAVPSTCHQVLCY 178
WIHK R VPST HQ L +
Sbjct: 1578 PWIHKYRVVPSTLHQCLKF 1596
>gi|218195281|gb|EEC77708.1| hypothetical protein OsI_16788 [Oryza sativa Indica Group]
gi|222629278|gb|EEE61410.1| hypothetical protein OsJ_15603 [Oryza sativa Japonica Group]
Length = 1108
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
Query: 40 NHPFFESLSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVE 99
N+P F ++E++F +D + S H+ L I IG ++RILID GS+VNIL ++
Sbjct: 866 NNPLF--VNEITFADEDNIIEGSDHNRPLYIEGNIGPAHLRRILIDPGSAVNILPVRSLT 923
Query: 100 KMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGR 159
+ ++ + + G ++ G IT+ + ++S F V++A + Y+ +LGR
Sbjct: 924 RAGFTTKDLEPTDMVICGFDNQGKSTLGAITVKIQMSTFSFKVHFFVIEANTSYSALLGR 983
Query: 160 QWIHKMRAVPSTCHQVLCY 178
WIHK R VPST HQ L +
Sbjct: 984 PWIHKYRVVPSTLHQCLKF 1002
>gi|38567867|emb|CAD41628.3| OSJNBa0091D06.8 [Oryza sativa Japonica Group]
Length = 2657
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
Query: 40 NHPFFESLSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVE 99
N+P F ++E++F +D + S H+ L I IG ++RILID GS+VNIL ++
Sbjct: 1438 NNPLF--VNEITFADEDNIIEGSDHNRPLYIEGNIGPAHLRRILIDPGSAVNILPVRSLT 1495
Query: 100 KMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGR 159
+ ++ + + G ++ G IT+ + ++S F V++A + Y+ +LGR
Sbjct: 1496 RAGFTTKDLEPTDMVICGFDNQGKSTLGAITVKIQMSTFSFKVHFFVIEANTSYSALLGR 1555
Query: 160 QWIHKMRAVPSTCHQVLCY 178
WIHK R VPST HQ L +
Sbjct: 1556 PWIHKYRVVPSTLHQCLKF 1574
>gi|4680208|gb|AAD27571.1|AF114171_12 polyprotein [Sorghum bicolor]
gi|4378066|gb|AAD19359.1| polyprotein [Sorghum bicolor]
Length = 1877
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 4/153 (2%)
Query: 46 SLSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQ 105
S + ++F +DL+L PH DALVI+ + V RIL+D+GSS +I+ T ++M+L +
Sbjct: 616 SRTPITFTEEDLRLESYPHTDALVITTNVAGWGVSRILVDSGSSADIIFAGTFDQMKLSR 675
Query: 106 DKIKLFEQPLIGLSGIVTNSDGVITLLV----IAKSYSLLTDFLVVKATSPYNVILGRQW 161
+++ E PLIG G ++ G + L V + + F VV PYN I GR +
Sbjct: 676 SQLQPSESPLIGFGGKQIHALGKVALPVSFGTTENARTEYVTFDVVDLHYPYNAIFGRGF 735
Query: 162 IHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATA 194
++K A + + ++G+ + G Q A
Sbjct: 736 LNKFNAAAHMGYLCMKIPALHGVITVHGSQKEA 768
>gi|147775628|emb|CAN67188.1| hypothetical protein VITISV_015934 [Vitis vinifera]
Length = 527
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 78/153 (50%), Gaps = 16/153 (10%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D + M +
Sbjct: 367 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVD----------PVIGHM---GHSLAGL 413
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+NVILGR +H M+A+
Sbjct: 414 ENPGRILSGFNGSSTTSLGDIILPVQAGPXTLNVQFSVVQELSPFNVILGRTXLHYMKAI 473
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
PST HQ++ + T G ++ G Q A C +A
Sbjct: 474 PSTYHQMVSFLTDEGQTDLYGSQLAARQCYQIA 506
>gi|224090917|ref|XP_002309115.1| predicted protein [Populus trichocarpa]
gi|222855091|gb|EEE92638.1| predicted protein [Populus trichocarpa]
Length = 477
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 4/122 (3%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F P D + I+ PH DALV SI + V RIL+D+GSS+NIL + M ++ ++
Sbjct: 181 ITFTPVDGQGIKYPHRDALVFSIIMEGHRVHRILVDSGSSMNILSTKAITNMGIDASRMT 240
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKS----YSLLTDFLVVKATSPYNVILGRQWIHKM 165
L PLIG+ G G L+VI + +L F+++ PYN I+GR +H++
Sbjct: 241 LVSTPLIGIEGSAVPVKGATRLIVIMGTAPCCVTLQKTFIIIDTHPPYNAIIGRPLLHQL 300
Query: 166 RA 167
A
Sbjct: 301 SA 302
>gi|147842207|emb|CAN73594.1| hypothetical protein VITISV_004696 [Vitis vinifera]
Length = 287
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 78/150 (52%), Gaps = 23/150 (15%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D P+ DAL++S+++G+ V+RIL+D GSS +++ + V M
Sbjct: 140 FPPVDSTRTLQPYRDALILSLEVGDFDVRRILVDPGSSADLVQASVVSHM---------- 189
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
G IV L + A +L F VV+ SP+N+ILGR W+H M+A+PST
Sbjct: 190 -----GHRDIV--------LSIQAGPVTLNVQFSVVQELSPFNIILGRAWLHYMKAIPST 236
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 237 YHQMVSFLTNEGQIDLYGSQLAACQCYQIA 266
>gi|147772906|emb|CAN64575.1| hypothetical protein VITISV_003432 [Vitis vinifera]
Length = 504
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 12/150 (8%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ ++ IL+D GSS +++ + V M ++
Sbjct: 367 FPPVDPTRTLQPHRDALILSLEIGDFDMRHILVDPGSSTDLVQASVVAHMGHSLAGLENP 426
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
Q L SG T S G I L V A SP+N+ILGR W+H M+ +PST
Sbjct: 427 RQILSEFSGSSTTSLGDIILPVQAG------------PLSPFNIILGRTWLHYMKVIPST 474
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 475 YHQMVSFLTNEGQIDLYGSQLAARQCYQIA 504
>gi|224129068|ref|XP_002328882.1| predicted protein [Populus trichocarpa]
gi|222839312|gb|EEE77649.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 15/157 (9%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F P D + I+ PH+ ALVIS + V RIL+DN S VNI+ + K+ ++ ++
Sbjct: 255 ITFTPTDGRGIEYPHEYALVISTVMERHKVHRILVDNDSLVNIMSAEAMMKIGIDDSRMT 314
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
L PLIG+ G T + + ++ F+V+ PYN I+GR +H++RA
Sbjct: 315 LVPTPLIGIEG---------TTVPVKET------FMVIITHHPYNAIIGRPLLHQLRAEV 359
Query: 170 STCHQVLCYQTIYGIEEIRGDQATAWACAVLALKETK 206
ST + L + T GI ++ +Q + CA LK K
Sbjct: 360 STKYLTLKFPTSKGIVAVKRNQEISRECANTCLKGKK 396
>gi|147798136|emb|CAN73896.1| hypothetical protein VITISV_032337 [Vitis vinifera]
Length = 410
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 77/146 (52%), Gaps = 11/146 (7%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D I PH DAL++S++IG+ V+ IL+D SS +++ + + M ++
Sbjct: 275 FPPVDPTRILQPHXDALILSLEIGDFDVRCILVDPDSSADLVQASVISHMGHSLTGLENP 334
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I LLV A SP+NVILGR W+H M+ +PST
Sbjct: 335 GRILSGFNGASTTSLGDIVLLVQAGP-----------DLSPFNVILGRTWLHYMKVIPST 383
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWAC 197
HQ++ + T G ++ G Q A C
Sbjct: 384 YHQMIRFLTKDGQIDLYGSQLAARQC 409
>gi|359485690|ref|XP_003633313.1| PREDICTED: uncharacterized protein LOC100854367 [Vitis vinifera]
Length = 955
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 74/132 (56%)
Query: 73 KIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLL 132
+IG+ VKRIL+D GSS ++L + V++M + + L G +G T S G + L
Sbjct: 419 RIGDFDVKRILVDPGSSTDLLQVSVVKQMGFIPSSQENPGRMLSGFNGASTTSLGDVILP 478
Query: 133 VIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQA 192
+ A L F VV+ SP+N ILGR W+H M+ +PST HQ++ + T G ++ G Q
Sbjct: 479 IQAGPVILNVLFSVVEDLSPFNAILGRTWLHSMKVIPSTYHQMVSFITHDGQVDLYGSQL 538
Query: 193 TAWACAVLALKE 204
A C +A +E
Sbjct: 539 VARQCYQIAREE 550
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 1 MGRVETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
M ETL+ +++RFR +VE+ + + + FKR + PFFESL++
Sbjct: 174 MQENETLREFVKRFRQVVLQVESYNMDVVLQIFKRSICPGTPFFESLAK 222
>gi|147865861|emb|CAN78972.1| hypothetical protein VITISV_006186 [Vitis vinifera]
Length = 481
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 70/125 (56%), Gaps = 6/125 (4%)
Query: 80 KRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQP---LIGLSGIVTNSDGVITLLVIAK 136
+RIL+D GSSV+++ + V M + E P L G +G T S G I L V A
Sbjct: 339 RRILVDPGSSVDLVQASVVAHM---GHSLAGLENPGRILSGFNGSSTTSLGDIILPVQAG 395
Query: 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
+L F VV+ SP+N+ILGR W+H M+A+PST HQ++ + T G ++ G Q A
Sbjct: 396 PVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPSTYHQMVSFLTNEGQIDLYGSQLAARQ 455
Query: 197 CAVLA 201
C +A
Sbjct: 456 CYQIA 460
>gi|77555058|gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1889
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 88/162 (54%), Gaps = 9/162 (5%)
Query: 39 SNHPFFESLSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATV 98
SN P + S + +SF P+D + I PH D LV+S++I C V+R+LID GSS ++L
Sbjct: 727 SNPPVY-SKTVISFGPEDAEGILFPHQDPLVVSVEIAQCEVQRVLIDGGSSADVLFYDAF 785
Query: 99 EKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITL-LVIAKSYSLLTD---FLVVKATSPYN 154
+KM++ +D++ PL G G ++ G I+L +V K ++ + F VV YN
Sbjct: 786 KKMQIPEDRLTNAGVPLQGFGGQQVHAIGKISLQVVFGKGTNVRKEEIVFDVVDMPYQYN 845
Query: 155 VILGRQWIHKMRAVPSTCHQVLCYQ--TIYGIEEIRGDQATA 194
ILGR I+ A+ H +C + G+ +RG+Q A
Sbjct: 846 AILGRSTINIFEAI--IHHNYICMKLPGPRGVITVRGEQLAA 885
>gi|9927274|dbj|BAB08213.2| unnamed protein product [Oryza sativa Japonica Group]
Length = 2876
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 80/147 (54%), Gaps = 2/147 (1%)
Query: 40 NHPFFESLSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVE 99
++P F ++E++F +D + H+ L I IG+ ++RILID GS+VNIL ++
Sbjct: 1356 DNPLF--VNEITFADEDNIIKGGDHNRPLYIEGNIGSAHLRRILIDLGSAVNILPVRSLT 1413
Query: 100 KMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGR 159
+ ++ + + G + G IT+ + ++S F V++A + Y+ +LGR
Sbjct: 1414 RAGFTTKDLEPIDVVICGFDNQGKPTLGAITIKIQMSTFSFKVRFFVIEANTSYSALLGR 1473
Query: 160 QWIHKMRAVPSTCHQVLCYQTIYGIEE 186
WIHK R VPST HQ L + G+++
Sbjct: 1474 PWIHKYRVVPSTLHQCLKFLDGNGVQQ 1500
>gi|147795700|emb|CAN61203.1| hypothetical protein VITISV_041580 [Vitis vinifera]
Length = 505
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 75/139 (53%), Gaps = 24/139 (17%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIV 122
PH DAL++S++IG+ V+RIL+D GSS +++ + + M G + I+
Sbjct: 370 PHRDALILSLEIGDFDVRRILVDLGSSADLVQASVISHM---------------GHNIIL 414
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G +TL V F VV+ SP+N+ILG W+H M+A+PST HQ++ + T
Sbjct: 415 PVQAGPVTLNV---------QFSVVQELSPFNIILGHTWLHYMKAIPSTYHQMVSFLTNE 465
Query: 183 GIEEIRGDQATAWACAVLA 201
G ++ G Q A C +A
Sbjct: 466 GQIDLYGSQLAARQCYQIA 484
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RFR A +VE C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFRQAVLQVEACSMDAVLQIFKRSICPGTPFFESLAK 158
>gi|147774488|emb|CAN70063.1| hypothetical protein VITISV_031483 [Vitis vinifera]
Length = 452
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 75/150 (50%), Gaps = 24/150 (16%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+ IL+D GSS +++ + V+ M
Sbjct: 324 FPPVDPTRTLQPHRDALILSLEIGDFNVRCILVDPGSSADLVQASVVDHMGYN------- 376
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
I L V A S +L F VV+ SP+NVILGR W+H ++ +PST
Sbjct: 377 -----------------IILPVQAGSVTLNVQFSVVQELSPFNVILGRTWLHYIKVIPST 419
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q C +A
Sbjct: 420 YHQMVSFLTNEGQIDLYGSQLATRQCYQIA 449
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + FKR + + PFFESL++
Sbjct: 95 ESLREFVKRFGQAVLQVEACSMDAVLQIFKRSICPDTPFFESLAK 139
>gi|147771539|emb|CAN62506.1| hypothetical protein VITISV_010654 [Vitis vinifera]
Length = 458
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 72/133 (54%), Gaps = 6/133 (4%)
Query: 72 IKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQP---LIGLSGIVTNSDGV 128
I G+ V RIL+D G+S +++ + V M + E P L G +G T S G
Sbjct: 314 INGGDFDVWRILVDPGNSADLVQASVVSHM---GHNLAGLENPGRILSGFNGSSTTSLGD 370
Query: 129 ITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIR 188
I L V A +L F VV+ SP+N+ILGR W+H M+A+PST HQ++ + T G ++
Sbjct: 371 IVLPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPSTYHQMVSFLTNEGQIDLY 430
Query: 189 GDQATAWACAVLA 201
G Q A C +A
Sbjct: 431 GSQLAARQCYQIA 443
Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + FKR + + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQVEACSMDTVLQIFKRSICPSTPFFESLAK 158
>gi|147836363|emb|CAN62093.1| hypothetical protein VITISV_034669 [Vitis vinifera]
Length = 483
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 14/136 (10%)
Query: 66 DALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNS 125
D ++I IG+ V+RIL+D GSS ++ A++ R+ L G +G S
Sbjct: 362 DGIIIFPLIGDFDVRRILVDPGSSADL---ASINPGRI-----------LSGFNGASXTS 407
Query: 126 DGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIE 185
G I L V A +L F VV+ SP+NVILGR W+H M+ +PST HQ++ + T G
Sbjct: 408 LGDIVLPVQAGPATLKVQFSVVQDLSPFNVILGRTWLHYMKVIPSTYHQMVSFLTKDGQI 467
Query: 186 EIRGDQATAWACAVLA 201
++ G Q A C +A
Sbjct: 468 DLYGSQLAARQCYQIA 483
>gi|147806335|emb|CAN72090.1| hypothetical protein VITISV_019913 [Vitis vinifera]
Length = 519
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 78/150 (52%), Gaps = 17/150 (11%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH +AL++S++IG+ V+ IL+D GSSV+++ + V M ++
Sbjct: 366 FPPVDPTRTLQPHRNALILSLEIGDFDVRHILVDPGSSVDLVQASVVGHMGHSLTGLENL 425
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L + SP+NVILGR W+H M+A+ ST
Sbjct: 426 GRILSGFNGSSTTSLGDIIL-----------------SLSPFNVILGRTWLHYMKAILST 468
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 469 YHQMVSFLTNDGQIDLYGSQLAARQCYQIA 498
>gi|147788833|emb|CAN68916.1| hypothetical protein VITISV_006670 [Vitis vinifera]
Length = 446
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 17/171 (9%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++ ++IG+ V+RIL+D G+S +++ K + +I+
Sbjct: 286 FPPVDPTRTLQPHRDALILFLEIGDFDVRRILVDPGNSADLVQPHKPRKPWMNPVRIQRV 345
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
++G S S+S T LVV+ SP+N+ILGR W+H M+ +PST
Sbjct: 346 VNYVLGRHCTAGPS---------WPSHSQRT-ILVVQELSPFNIILGRTWLHYMKVIPST 395
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLALKETKR-------KDSNFENQ 215
HQ++ + T G ++ G Q A C +A K K SN NQ
Sbjct: 396 YHQMVSFLTNDGQIDLYGSQLAARQCYQIARKAGTNQEDVPLPKPSNARNQ 446
>gi|147811798|emb|CAN74866.1| hypothetical protein VITISV_002409 [Vitis vinifera]
Length = 354
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 63/113 (55%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIV 122
PH++AL++ + +G V+RIL+D G SV+ L KM ++ + L G +G
Sbjct: 133 PHENALILMLGMGGFDVRRILVDPGGSVDHLQMLAYRKMGYSPSTLENPRRLLSGFNGTT 192
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQV 175
T S G + L V A ++ F +V SPYN I+G W+HKM+ +P T HQ+
Sbjct: 193 TTSIGDVMLHVQADPVTMSVRFSMVDDLSPYNAIMGHAWLHKMKVIPFTYHQM 245
>gi|77552432|gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1980
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 85/159 (53%), Gaps = 8/159 (5%)
Query: 42 PFFESLSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM 101
P S + +SF P+D + I PH D LV+S++I C V+R+LID GSS ++L +KM
Sbjct: 729 PPVYSKTVISFGPEDAEGILFPHQDPLVVSVEIAQCEVQRVLIDGGSSADVLFYDAFKKM 788
Query: 102 RLEQDKIKLFEQPLIGLSGIVTNSDGVITL-LVIAKSYSLLTD---FLVVKATSPYNVIL 157
++ +D++ PL G G ++ G I+L +V K ++ + F VV YN IL
Sbjct: 789 QIPEDRLTNAGVPLQGFGGQQVHAIGKISLQVVFGKGTNVRKEEIVFDVVDMPYQYNAIL 848
Query: 158 GRQWIHKMRAVPSTCHQVLCYQ--TIYGIEEIRGDQATA 194
GR I+ A+ H +C + G+ +RG+Q A
Sbjct: 849 GRSTINIFEAI--IHHNYICMKLPGPRGVITVRGEQLVA 885
>gi|147844599|emb|CAN80066.1| hypothetical protein VITISV_035228 [Vitis vinifera]
Length = 961
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 78/136 (57%)
Query: 74 IGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLV 133
+G+ V+RILID GSS ++L + + M + ++ + L G +G+VT S I L V
Sbjct: 1 MGDFDVRRILIDPGSSTDLLQTSVIGHMGRDLSGLENLGRILSGFNGVVTTSLRDIVLPV 60
Query: 134 IAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQAT 193
A S +L FLVV+ SP+N ILG W+H M+ +PST +Q++ + T G ++ G Q
Sbjct: 61 QAGSVTLNVQFLVVQDLSPFNAILGLTWLHYMKVIPSTYYQMVSFLTEDGQIDLHGSQEF 120
Query: 194 AWACAVLALKETKRKD 209
+++ L ++++
Sbjct: 121 TPPSSLIDLTSCQQRN 136
>gi|358345054|ref|XP_003636599.1| hypothetical protein MTR_047s0025 [Medicago truncatula]
gi|355502534|gb|AES83737.1| hypothetical protein MTR_047s0025 [Medicago truncatula]
Length = 346
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I KI V ++L+D G++VN+L + + K+ L +K L G
Sbjct: 208 HLKPLFIQAKINGVGVNKVLVDGGATVNLLPQSFLGKIGLYDSDLKPHNVILTNYEGTSG 267
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
NS G I L ++ S +T F+VV + + +NV LGR+WIH + AVPST HQ + G
Sbjct: 268 NSLGAIELELVVGSTRRITTFMVVPSKANFNVRLGREWIHGVGAVPSTVHQRIAIWKEDG 327
Query: 184 -IEEIRGDQA 192
+E + DQ+
Sbjct: 328 LVENVEADQS 337
>gi|147780890|emb|CAN61712.1| hypothetical protein VITISV_034503 [Vitis vinifera]
Length = 668
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 75/136 (55%)
Query: 66 DALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNS 125
D +I IG+ V+ IL+D GSS +++ + V + ++ + L G +G+ T S
Sbjct: 513 DGTIIFPPIGDFDVRCILVDLGSSTDLVQASVVSHIGHSLTGLENSGRILSGFNGLSTTS 572
Query: 126 DGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIE 185
G I L V A +L F VV+ SP+NVILGR W+H M+A+PST HQ++ + T G
Sbjct: 573 LGDIILPVQAGLVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQMVSFLTNEGQI 632
Query: 186 EIRGDQATAWACAVLA 201
++ Q A C +A
Sbjct: 633 DLYXSQLAARQCYQIA 648
>gi|147864947|emb|CAN79366.1| hypothetical protein VITISV_036684 [Vitis vinifera]
Length = 423
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 68/123 (55%)
Query: 75 GNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI 134
G+ V+RILID GSS +++ + + M +K + L+G + T S G I L V
Sbjct: 300 GDFDVRRILIDPGSSADLVQASVISHMGHSLTGLKNLGRILLGFNWSSTTSLGDIVLSVQ 359
Query: 135 AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATA 194
A +L F VV+ P+NVILGR W+H M+A+PST HQ++ + T G ++ G Q
Sbjct: 360 AGPVTLNVQFSVVQDLIPFNVILGRTWLHYMKAIPSTYHQMVSFLTKDGQIDLYGSQLPT 419
Query: 195 WAC 197
C
Sbjct: 420 RQC 422
>gi|147838579|emb|CAN72119.1| hypothetical protein VITISV_012998 [Vitis vinifera]
Length = 508
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 76/152 (50%), Gaps = 19/152 (12%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D I PH DAL++S+ +G+ D + V +M LE ++
Sbjct: 357 FPPVDPTRILQPHRDALILSLVMGD----------------FDASVVNQMGLELSDLENP 400
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
L+G +G+ T S G I L V +L F VV SP+NVILGR W++ M+A+PST
Sbjct: 401 GWVLLGFNGVATTSLGDIVLPV---QVTLNVQFSVVGDLSPFNVILGRAWLYYMKAIPST 457
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLALK 203
HQ++ + T G + G Q A C + L+
Sbjct: 458 YHQMVSFLTKDGQTNLYGSQLAARQCYQIVLE 489
>gi|147852044|emb|CAN82277.1| hypothetical protein VITISV_008350 [Vitis vinifera]
Length = 334
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 23/160 (14%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIV 122
PH DAL+++I +G+ VKRI +D SS ++L A +++M + ++ + L G +G
Sbjct: 191 PHRDALILTIGVGDYDVKRISVDPSSSADLLQVAVIKRMGFKPSNLENPRRTLSGFNGSS 250
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
T S G + +L+D SP N ILG W+H M+ +PST HQ + + T
Sbjct: 251 TTSLGDV----------ILSDL------SPSNAILGCTWLHGMKVIPSTYHQRVSFITQD 294
Query: 183 GIEEIRGDQATAWACAVLAL-------KETKRKDSNFENQ 215
G ++ G Q TA C +A +E K++N +Q
Sbjct: 295 GQIDLYGSQLTARQCYQIACEAEPSADREHSPKEANASDQ 334
>gi|147790885|emb|CAN72653.1| hypothetical protein VITISV_019105 [Vitis vinifera]
Length = 741
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 5/165 (3%)
Query: 60 IQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLS 119
I PH DAL+IS+ + + V+ I++D GSS ++L + +++M LE ++ L G +
Sbjct: 384 ILQPHRDALIISLGMRDFDVRWIIVDPGSSTDLLQASVIKQMGLELSDLENHGWILSGFN 443
Query: 120 GIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQ 179
S G + L V A +L F VV+ S +N ILGR W+H M+A+ ST HQ++ +
Sbjct: 444 EASITSLGDVVLPVQAGLVTLNVQFSVVEYLSSFNAILGRTWLHYMKAILSTYHQMVSFL 503
Query: 180 TIYGIEEIRGDQATAWACAVLALKETKRKD-----SNFENQAKQD 219
T ++ G Q A C + + KD +N N +D
Sbjct: 504 TKDEQIDLYGSQLAARQCYQIVREIRSNKDVCVDYTNLNNACPKD 548
>gi|147766937|emb|CAN72129.1| hypothetical protein VITISV_022471 [Vitis vinifera]
Length = 508
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 76/140 (54%), Gaps = 1/140 (0%)
Query: 66 DALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNS 125
D ++I I RIL++ GSS +++ + V M ++ + L G +G T S
Sbjct: 352 DGIIIFPPIDPTRTLRILVNPGSSDDLVQASFVSHMGHSLTGLENPGRILSGFNGSSTTS 411
Query: 126 DGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIE 185
G I L V A +L F VV+ SP+NVILGR W+H M+A+PST HQ++ + T G
Sbjct: 412 LGDIVLPVQADPVTLNVQFSVVQDLSPFNVILGRTWLHYMKAMPSTYHQMVSFLTNDGQI 471
Query: 186 EIRGDQATAWACAVLALKET 205
++ G Q A C +A +ET
Sbjct: 472 DLYGSQLAARQCYQIA-RET 490
Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + FKR + PFFESL++
Sbjct: 92 ESLREFVKRFGQAVLQVEACSMDAVLQIFKRSICPGTPFFESLAK 136
>gi|147861838|emb|CAN83182.1| hypothetical protein VITISV_037717 [Vitis vinifera]
Length = 566
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 68/119 (57%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F P D PH DAL++S++IG+ V+RIL+D SS +++ + V M ++
Sbjct: 377 ITFPPVDPTRTLQPHCDALILSLEIGDFDVRRILVDPSSSADLVQASVVGHMGHSLTDLE 436
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
+ L G +G T S G I L V +L F VV+ SP+NVILGR W+H M+A+
Sbjct: 437 NPGRILSGFNGSSTTSLGDIILPVQDGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAI 495
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + + FKR + + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQVEACTMDVVLQIFKRSICPDTPFFESLAK 158
>gi|147783947|emb|CAN70250.1| hypothetical protein VITISV_028040 [Vitis vinifera]
Length = 504
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 75/140 (53%), Gaps = 1/140 (0%)
Query: 66 DALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNS 125
D +I I RIL++ GSS +++ + V M ++ + L G +G T S
Sbjct: 348 DGTIIFPPIDPTRTLRILVNPGSSDDLVQASFVSHMGHSLTGLENPRRILSGFNGSSTTS 407
Query: 126 DGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIE 185
G I L V A +L F VV+ SP+NVILGR W+H M+A+PST HQ++ + T G
Sbjct: 408 LGDIVLPVQADPVTLNVQFSVVQDLSPFNVILGRIWLHYMKAMPSTYHQMVSFLTNDGQV 467
Query: 186 EIRGDQATAWACAVLALKET 205
++ G Q A C +A +ET
Sbjct: 468 DLYGSQLAARQCYQIA-RET 486
>gi|356502974|ref|XP_003520289.1| PREDICTED: uncharacterized protein LOC100784699 [Glycine max]
Length = 1826
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 85/174 (48%), Gaps = 5/174 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F +++ H+ AL +S+K + +V ++LIDNGSS+N++ +T+EK+ +K
Sbjct: 529 LAFAEEEIPAEGRGHNKALHVSVKCMDHIVAKVLIDNGSSLNVMPKSTLEKLPFNASHLK 588
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ G G I L V ++ F ++ PY+ +LGR WIH + VP
Sbjct: 589 PSSMVVRAFDGTRREVRGEIDLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVP 648
Query: 170 STCHQVLCYQTIYGIEEIRGDQATAWACA-----VLALKETKRKDSNFENQAKQ 218
ST HQ L + + + G++ +C V A +E+ +FE + Q
Sbjct: 649 STLHQKLKFVVEGHLVIVSGEEDILVSCPSSMPYVEAAEESWDPSIDFEQEMNQ 702
>gi|224100349|ref|XP_002311842.1| predicted protein [Populus trichocarpa]
gi|222851662|gb|EEE89209.1| predicted protein [Populus trichocarpa]
Length = 324
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 4/154 (2%)
Query: 57 LKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLI 116
+K ++ P++DALVISI + V +ILID+ + VNIL + KM + ++ L PLI
Sbjct: 97 IKGVRHPYEDALVISIVMKGHRVYKILIDDSNLVNILLAEAMTKMGMNASRMTLVPTPLI 156
Query: 117 GLSGIVTNSDGVITLLV---IAKSY-SLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTC 172
G+ G G + L + A Y +L F+V+ PYN I+ R +H++ V ST
Sbjct: 157 GIEGSAVPMKGAVGLTITIGTAPHYVTLQQTFMVIDTHLPYNAIIRRPLLHQISVVVSTK 216
Query: 173 HQVLCYQTIYGIEEIRGDQATAWACAVLALKETK 206
+ + + T+ + ++G+Q + CA LK K
Sbjct: 217 YLTMKFPTVKVVVVVKGNQEASRECANTCLKGKK 250
>gi|147782535|emb|CAN61917.1| hypothetical protein VITISV_027490 [Vitis vinifera]
Length = 475
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 68/126 (53%), Gaps = 6/126 (4%)
Query: 79 VKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQP---LIGLSGIVTNSDGVITLLVIA 135
++RIL+D GSS +++ + + M + E P L G +G T S G I L V A
Sbjct: 332 LQRILVDPGSSADLVQASVIGHM---GHSLAGLENPGRILSGFNGSSTTSLGDIILPVQA 388
Query: 136 KSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAW 195
+L F VV+ S +NVILGR W+H M+A+PST HQ++ + T G ++ G Q
Sbjct: 389 GPVTLNVQFSVVQELSSFNVILGRTWLHYMKAIPSTYHQMVSFLTDEGQTDLYGSQLATR 448
Query: 196 ACAVLA 201
C +A
Sbjct: 449 QCYQIA 454
>gi|356565902|ref|XP_003551175.1| PREDICTED: uncharacterized protein LOC100813923 [Glycine max]
Length = 1292
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 69/129 (53%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F +++ + H+ AL +S+K + +V ++LIDNGSS+N++ +T+EK+ +K
Sbjct: 312 LAFAEEEIPVEGRGHNKALHVSVKCMDHIVAKVLIDNGSSLNVMPKSTLEKLPFNASHLK 371
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ G G I L V ++ F ++ PY+ +LGR WIH + VP
Sbjct: 372 PSSMVVRAFDGTRREVRGEIDLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVP 431
Query: 170 STCHQVLCY 178
ST HQ L +
Sbjct: 432 STLHQKLKF 440
>gi|46981243|gb|AAT07561.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981311|gb|AAT07629.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1459
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 8/151 (5%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + I PH D LVIS++I C V+R+L+D GSS ++L +KM++ +D++
Sbjct: 254 ISFGPEDAEGILFPHQDPLVISVEIAQCEVQRVLVDGGSSADVLFYDAFKKMQIPEDRLT 313
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQWIHKM 165
PL G G ++ G I+L V+ F VV YN +LGR I+
Sbjct: 314 HAGIPLQGFGGHQVHTIGKISLQVVFGGGENKRREEVVFDVVDMPYQYNAVLGRSTINIF 373
Query: 166 RAVPSTCHQVLCYQ--TIYGIEEIRGDQATA 194
A+ H +C + G+ +RG Q A
Sbjct: 374 EAI--IHHNYICMKLPGPKGVISVRGGQLAA 402
>gi|356566094|ref|XP_003551270.1| PREDICTED: uncharacterized protein LOC100784162 [Glycine max]
Length = 1145
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 69/129 (53%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F +++ H+ AL +S+K + +V ++LIDNGSS+N++ +T+EK+ +K
Sbjct: 287 LAFAEEEIPAEGRGHNKALHVSVKCMDHIVAKVLIDNGSSLNVMPKSTLEKLPFNASHLK 346
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ +G G I L V ++ F ++ PY+ +LGR WIH + VP
Sbjct: 347 PSSMVVRAFNGTRREVRGEIDLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVP 406
Query: 170 STCHQVLCY 178
ST HQ L +
Sbjct: 407 STLHQKLKF 415
>gi|356566411|ref|XP_003551425.1| PREDICTED: uncharacterized protein LOC100794033 [Glycine max]
Length = 1199
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F +++ H+ AL +S+K + +V ++LIDNGSS+N++ +T+EK+ +K
Sbjct: 343 LAFAEEEIPAEGRGHNKALHVSVKCMDHIVAKVLIDNGSSLNVMPKSTLEKLPFNASHLK 402
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ G G I L V ++ F ++ PY+ +LGR WIH + VP
Sbjct: 403 PSSMVVRAFDGTRREVRGEIDLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVP 462
Query: 170 STCHQVLCY 178
ST HQ L +
Sbjct: 463 STLHQKLKF 471
>gi|108706251|gb|ABF94046.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 504
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 77/151 (50%), Gaps = 8/151 (5%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + I PH D LVIS++I C V+R+L+D GSS ++L +KM++ +D++
Sbjct: 88 ISFGPEDAEGILFPHQDPLVISVEITQCEVQRVLVDGGSSADVLFYDAFKKMQIPEDRLT 147
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQWIHKM 165
PL G G ++ G I+L V+ F VV YN ILGR I+
Sbjct: 148 HAGIPLQGFGGQQVHAIGKISLQVVFGGGENKRREEVVFDVVDMPYQYNAILGRSTINIF 207
Query: 166 RAVPSTCHQVLCYQ--TIYGIEEIRGDQATA 194
A+ H +C + G+ +RG Q A
Sbjct: 208 EAI--IHHNYICMKLPGPKGVISVRGGQLAA 236
>gi|147798506|emb|CAN74391.1| hypothetical protein VITISV_042652 [Vitis vinifera]
Length = 517
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 67/125 (53%), Gaps = 6/125 (4%)
Query: 80 KRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQP---LIGLSGIVTNSDGVITLLVIAK 136
+RIL+D S +++ + + M + E P L G +G T S G I L V A
Sbjct: 372 RRILVDPSISADLVQASVIGHM---GHSLTCLENPGRILSGFNGSSTTSLGDIVLPVQAG 428
Query: 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
+L F VV+ SP+N+ILGR W+H M+A+PST HQ++ + T G ++ G Q A
Sbjct: 429 PITLNVQFSVVQELSPFNIILGRTWLHYMKAIPSTYHQMVSFLTNEGQIDLYGSQLAARQ 488
Query: 197 CAVLA 201
C +A
Sbjct: 489 CYQIA 493
>gi|356523394|ref|XP_003530325.1| PREDICTED: uncharacterized protein LOC100777325 [Glycine max]
Length = 1159
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F +++ H+ AL +S+K + +V ++LIDNGSS+N++ +T+EK+ +K
Sbjct: 298 LAFAEEEIPAEGRGHNKALHVSVKCMDHIVAKVLIDNGSSLNVMPKSTLEKLPFNASHLK 357
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ G G I L V ++ F ++ PY+ +LGR WIH + VP
Sbjct: 358 PSSMVVRAFDGTRQEVRGEIDLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVP 417
Query: 170 STCHQVLCY 178
ST HQ L +
Sbjct: 418 STLHQKLKF 426
>gi|356551506|ref|XP_003544115.1| PREDICTED: uncharacterized protein LOC100783732 [Glycine max]
Length = 1229
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F +++ H+ AL +S+K + +V ++LIDNGSS+N++ +T+EK+ +K
Sbjct: 309 LAFAEEEIPAEGRGHNKALHVSVKCMDHIVAKVLIDNGSSLNVMPKSTLEKLPFNVSHLK 368
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ G G I L V ++ F ++ PY+ +LGR WIH + VP
Sbjct: 369 PSSMVVRAFDGTRREVRGEIDLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVP 428
Query: 170 STCHQVLCY 178
ST HQ L +
Sbjct: 429 STLHQKLKF 437
>gi|356565922|ref|XP_003551185.1| PREDICTED: uncharacterized protein LOC100779154 [Glycine max]
Length = 1946
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 67/127 (52%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F +++ H+ AL +S+K + +V ++LIDNGSS+N++ +T++K+ +K
Sbjct: 623 LAFAEEEIPAEGRGHNKALHVSVKCMDHIVAKVLIDNGSSLNVMPKSTLDKLPFNASHLK 682
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ G G I L V ++ F ++ PY+ +LGR WIH + VP
Sbjct: 683 PSSMVVRAFDGTRREVRGEIDLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVP 742
Query: 170 STCHQVL 176
ST HQ L
Sbjct: 743 STLHQKL 749
>gi|147825145|emb|CAN73243.1| hypothetical protein VITISV_005388 [Vitis vinifera]
Length = 484
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 66/121 (54%)
Query: 81 RILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSL 140
RIL+D GSS +++ + V +M ++ E+ L G +G T S G + L V +L
Sbjct: 301 RILVDLGSSADLVQASVVGRMGHSLTSLENPERILSGFNGSSTTSLGDVILTVQVGPVTL 360
Query: 141 LTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVL 200
F VV+ SP+NVILG W+H M+A+PST HQ++ + T G + G Q C +
Sbjct: 361 NVQFSVVQDLSPFNVILGCTWLHYMKAIPSTYHQMVSFLTKDGQVNLYGSQLAVRQCYQI 420
Query: 201 A 201
A
Sbjct: 421 A 421
>gi|356541586|ref|XP_003539255.1| PREDICTED: uncharacterized protein LOC100809507 [Glycine max]
Length = 1322
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F +++ H+ AL +S+K + +V ++LIDNGSS+N++ +T+EK+ +K
Sbjct: 339 LAFAEEEIPTEGRGHNKALHVSVKCMDHIVAKVLIDNGSSLNVMPKSTLEKLPFNASHLK 398
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ G G I L V ++ F ++ PY+ +LGR W H + VP
Sbjct: 399 PSSMVVRAFDGTRREVRGEIDLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWFHSVGVVP 458
Query: 170 STCHQVLCY 178
ST HQ L +
Sbjct: 459 STLHQKLKF 467
>gi|356506670|ref|XP_003522099.1| PREDICTED: uncharacterized protein LOC100817680 [Glycine max]
Length = 1197
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 68/129 (52%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F +++ H+ AL +S+K + +V ++LIDNGSS+N++ +T++K+ +K
Sbjct: 342 LAFAEEEIPAEGRGHNKALHVSVKCMDHIVAKVLIDNGSSLNVMPKSTLDKLPFNASHLK 401
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ G G I L V ++ F ++ PY+ +LGR WIH + VP
Sbjct: 402 PSSMVVRAFDGTRREVRGEIDLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVP 461
Query: 170 STCHQVLCY 178
ST HQ L +
Sbjct: 462 STLHQKLKF 470
>gi|356551150|ref|XP_003543941.1| PREDICTED: uncharacterized protein LOC100803865 [Glycine max]
Length = 1207
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 68/129 (52%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F +++ H+ AL +S+K + +V ++LIDNGSS+N++ +T++K+ +K
Sbjct: 336 LAFAEEEIPAEGRGHNKALHVSVKCMDHIVAKVLIDNGSSLNVMPKSTLDKLPFNASHLK 395
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ G G I L V ++ F ++ PY+ +LGR WIH + VP
Sbjct: 396 PSSMVVRAFDGTRREVRGEIDLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVP 455
Query: 170 STCHQVLCY 178
ST HQ L +
Sbjct: 456 STLHQKLKF 464
>gi|356502987|ref|XP_003520295.1| PREDICTED: uncharacterized protein LOC100793173 [Glycine max]
Length = 1150
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 68/129 (52%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F +++ H+ AL +S+K + +V ++LIDNGSS+N++ +T++K+ +K
Sbjct: 290 LAFAEEEIPAEGRGHNKALHVSVKCMDHIVAKVLIDNGSSLNVMPKSTLDKLPFNASHLK 349
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ G G I L V ++ F ++ PY+ +LGR WIH + VP
Sbjct: 350 PSSMVVRAFDGTRREVRGEIDLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVP 409
Query: 170 STCHQVLCY 178
ST HQ L +
Sbjct: 410 STLHQKLKF 418
>gi|356510495|ref|XP_003523973.1| PREDICTED: uncharacterized protein LOC100812732 [Glycine max]
Length = 1456
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 68/129 (52%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F +++ H+ AL +S+K + +V ++LIDNGSS+N++ +T++K+ +K
Sbjct: 261 LAFAEEEIPAEGRGHNKALHVSVKCMDHIVAKVLIDNGSSLNVMPKSTLDKLPFNASHLK 320
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ G G I L V ++ F ++ PY+ +LGR WIH + VP
Sbjct: 321 PSSMVVRAFDGTRREVRGEIDLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVP 380
Query: 170 STCHQVLCY 178
ST HQ L +
Sbjct: 381 STLHQKLKF 389
>gi|356506918|ref|XP_003522220.1| PREDICTED: uncharacterized protein LOC100800605 [Glycine max]
Length = 1467
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 68/129 (52%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F +++ H+ AL +S+K + +V ++LIDNGSS+N++ +T++K+ +K
Sbjct: 294 LAFAEEEIPAEGRGHNKALHVSVKCMDHIVAKVLIDNGSSLNVMPKSTLDKLPFNASHLK 353
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ G G I L V ++ F ++ PY+ +LGR WIH + VP
Sbjct: 354 PSSMVVRAFDGTRREVRGEIDLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVP 413
Query: 170 STCHQVLCY 178
ST HQ L +
Sbjct: 414 STLHQKLKF 422
>gi|147865149|emb|CAN84123.1| hypothetical protein VITISV_005636 [Vitis vinifera]
Length = 505
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 64/123 (52%), Gaps = 6/123 (4%)
Query: 82 ILIDNGSSVNILDDATVEKMRLEQDKIKLFEQP---LIGLSGIVTNSDGVITLLVIAKSY 138
I GSS +++ + + M + E P L G +G T S G I L V A
Sbjct: 365 IFPPPGSSADLVQASVIGHM---GHSLAGLENPGRILSGFNGSSTTSLGDIILPVXAGPV 421
Query: 139 SLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACA 198
+L F VV+ SP+NVILGR W+H M+A+PST HQ++ + T G ++ G Q A C
Sbjct: 422 TLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQMVSFLTBEGQTDLYGSQLAARQCY 481
Query: 199 VLA 201
+A
Sbjct: 482 QIA 484
>gi|356503020|ref|XP_003520310.1| PREDICTED: uncharacterized protein LOC100811791 [Glycine max]
Length = 1289
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 68/129 (52%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F+ +++ H+ L +S+K + +V ++LIDNGSS+N++ +T+EK+ +K
Sbjct: 316 LAFVEEEIPAEGRGHNKDLHVSVKCMDHIVAKVLIDNGSSLNVMPKSTLEKLPFNASHLK 375
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ G G I L V ++ F ++ PY+ +LGR WIH + VP
Sbjct: 376 PSSMVVRAFDGTRREVRGEIDLPVQIGPHTCQVTFQIMDINPPYSYLLGRPWIHSVGVVP 435
Query: 170 STCHQVLCY 178
ST HQ L +
Sbjct: 436 STLHQKLKF 444
>gi|113205384|gb|ABI34371.1| Gag/pol polyprotein, 3'-partial, putative [Solanum demissum]
Length = 907
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 76/136 (55%), Gaps = 1/136 (0%)
Query: 44 FESLSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRL 103
FE ++ ++F +L + + H+ L I++K V R+LID GS NI +T++K+ +
Sbjct: 303 FE-VNRITFSDDELPVEGTGHNQGLHITVKCELSYVTRVLIDGGSGANICPLSTLQKLNV 361
Query: 104 EQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIH 163
++++ + G T++ G I L++ +F V+ + YN++LGR W+H
Sbjct: 362 NVERVRPNNVCVRAFDGTKTDAIGEIELILKIGHVDFTVNFQVLNINASYNLLLGRPWVH 421
Query: 164 KMRAVPSTCHQVLCYQ 179
+ AVPST HQ++ ++
Sbjct: 422 RAGAVPSTLHQMVKFE 437
>gi|147859417|emb|CAN81438.1| hypothetical protein VITISV_014972 [Vitis vinifera]
Length = 395
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 26/152 (17%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F P D + P+ DAL++++ I + ++RIL N +
Sbjct: 249 IVFSPIDHTRVLQPYRDALILTLGIRDFAIRRIL--NPRRI------------------- 287
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
L G +G+ T S G ITL + A+ L F +V+ SP+N ILGR W+H M+ +P
Sbjct: 288 -----LSGFNGVSTTSLGDITLPIQARPVILNAQFFIVEYLSPFNAILGRTWLHNMKVIP 342
Query: 170 STCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
S HQ++ + T G ++ G Q A C +A
Sbjct: 343 SIYHQMVSFITQDGQIDLYGSQLKARQCYQVA 374
>gi|358343197|ref|XP_003635693.1| hypothetical protein MTR_001s0012 [Medicago truncatula]
gi|355525248|gb|AET05642.1| hypothetical protein MTR_001s0012 [Medicago truncatula]
Length = 266
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 62/111 (55%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I KI V ++ +D+G++VN+L ++ V K+ L +K L G
Sbjct: 138 HLKPLFILAKINGVGVNKVPVDDGATVNLLPESFVGKIGLFDTDLKPHNVILTNYEGTTG 197
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
NS G + L ++ S S T F+VV + +N++LGR+WIH + AVPST HQ
Sbjct: 198 NSLGAVELDLVVGSVSRTTMFMVVPSKVNFNMLLGREWIHGVGAVPSTVHQ 248
>gi|147781099|emb|CAN69448.1| hypothetical protein VITISV_007849 [Vitis vinifera]
Length = 500
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 83/161 (51%), Gaps = 13/161 (8%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V M ++
Sbjct: 339 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQTSVVGHMGHSLTGLENP 398
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G +G T S G I L V A +L F VV+ SP+N + +PST
Sbjct: 399 GRVLSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQKLSPFN-----------KVIPST 447
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLALKE-TKRKDSN 211
HQ++ + T G ++ G Q A C +A + T R+D++
Sbjct: 448 YHQMVSFLT-EGHIDLYGSQLAARQCYQIAREAGTSREDAH 487
Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + FKR + PFFESL++
Sbjct: 96 ESLREFVKRFGQAVLQVEACSMDAVLQIFKRSICPGTPFFESLAK 140
>gi|147822691|emb|CAN63934.1| hypothetical protein VITISV_000168 [Vitis vinifera]
Length = 839
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 68/121 (56%)
Query: 61 QSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSG 120
+ PH+DAL+++++I + V+ IL+D S ++L T ++M ++ + + G +G
Sbjct: 246 EQPHEDALILTLRINDFDVRWILVDPDSLTDLLQMFTFKQMGFPPSALENPRRIISGFNG 305
Query: 121 IVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQT 180
+T S G + L V S F V++ SP+N I+G W+H M+ +PST HQ+ Q
Sbjct: 306 ALTTSLGDVLLPVQVGSVIQNAQFSVMEDLSPFNTIMGGTWLHGMKVIPSTYHQMPIRQK 365
Query: 181 I 181
+
Sbjct: 366 V 366
>gi|147807456|emb|CAN77423.1| hypothetical protein VITISV_032394 [Vitis vinifera]
Length = 498
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 66/150 (44%), Gaps = 51/150 (34%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS ++
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADL------------------- 419
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
F VV+ SP+NVILGR W+H M+A+PST
Sbjct: 420 --------------------------------FSVVQELSPFNVILGRTWLHYMKAIPST 447
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 448 YHQMVSFLTNDGQIDLYGSQLAARHCYQIA 477
Score = 36.2 bits (82), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQVEACSMDAVLQIFKRSICPGTPFFESLAK 158
>gi|13161535|emb|CAC33017.1| hypothetical protein [Antirrhinum hispanicum]
Length = 1455
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIV 122
PHDD ++I I V R+LID GSSV+++ T + L+ ++I PL+G G
Sbjct: 483 PHDDPIIIQATIHGAKVSRVLIDTGSSVDVMFLPTFLALGLKIEQIVPETTPLVGFDGST 542
Query: 123 TNSDGVITLLVIAKSYSLLTD----FLVVKA-TSPYNVILGRQWIHKMRAVPSTCHQVLC 177
+ + G I LL+ L F ++ A YNVI GR + AVPS H +
Sbjct: 543 SETLGSIPLLMSWGRGHLRRTKEIRFWIINALAKTYNVICGRPSLCLFEAVPSVLHLKVK 602
Query: 178 YQTIYGIEEIRGDQATAWAC 197
+ GI E++G+QA A C
Sbjct: 603 FPANNGIGEVKGNQARAREC 622
>gi|19881646|gb|AAM01047.1|AC091735_20 putative pol polyprotein [Oryza sativa Japonica Group]
Length = 505
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L + I V R+L+D G++VN++ + +++ D++K L G +G T
Sbjct: 318 HMKPLYLKGHIDGKPVSRMLVDRGAAVNLMPYSLFKRLGRGDDELKKTNMILNGFNGEPT 377
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
+ G+ ++ + + +L T F +V YNVILGR WIH VPST HQ L
Sbjct: 378 EAKGIFSVELTMGNKTLPTTFFIVDVQGSYNVILGRCWIHANCCVPSTLHQCLIQWDGDD 437
Query: 184 IEEIRGDQATAWACA 198
+E ++ D +T A A
Sbjct: 438 VEIVQADTSTEVAMA 452
>gi|242254054|gb|ACS88375.1| retrotransposon protein [Coix lacryma-jobi]
Length = 1902
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 4/152 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F +D+KL PH DA+VI + V +IL+D GSS +IL +T + M+L+++ ++
Sbjct: 645 ITFDSRDMKLRDYPHTDAMVIETNLAGWTVTKILVDTGSSADILFASTFDSMKLDRNLLQ 704
Query: 110 LFEQPLIGLSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKM 165
+ PL G G + G I+L V + T+ F VV PYN I GR +
Sbjct: 705 PADNPLYGFGGQQVRAVGKISLPVTFGDQINCRTEHITFDVVDMFYPYNAIFGRGVTNAF 764
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
AV + + G+ + GDQ A A
Sbjct: 765 NAVIHPAYLCMKLPAPKGVVAVYGDQDIARAA 796
>gi|356566034|ref|XP_003551240.1| PREDICTED: uncharacterized protein LOC100800043 [Glycine max]
Length = 1267
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H+ AL +S+K + +V ++LIDNGSS+N++ +T+EK+ +K +
Sbjct: 368 HNKALHVSVKCMDHIVAKVLIDNGSSLNVMPKSTLEKLPFNASHLKPSSMVVRAFDDTRQ 427
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCY 178
G I L V ++ F ++ PY+ +LGR WIH + VPST HQ L +
Sbjct: 428 EVRGEIDLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVPSTLHQKLKF 482
>gi|77555179|gb|ABA97975.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 849
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L + + V R+L+D G++VN++ + +K+ E D++K L G +G T
Sbjct: 662 HMKPLYLKGHVDGKPVSRMLVDAGAAVNLMPYSLFKKLGREDDELKKTNMILSGFNGEPT 721
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
+ G+ + + + +L T F +V YNVILGR WIH VPST HQ L
Sbjct: 722 GARGIFSAELTVGNKTLPTAFFIVDVQGNYNVILGRCWIHANCCVPSTLHQCLIQWDGDD 781
Query: 184 IEEIRGDQATAWACA 198
+E ++ D + A A
Sbjct: 782 VEIVQADTSAEVAMA 796
>gi|147822788|emb|CAN68292.1| hypothetical protein VITISV_044076 [Vitis vinifera]
Length = 529
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 64/115 (55%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
++DALV+++ +G ++R+L+D GSSV++ + +KM ++ L +G
Sbjct: 92 YEDALVLTLGVGKFDMRRLLVDPGSSVDLFKMSAYKKMSYSPSALENLRCLLSRFNGATM 151
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCY 178
S + L V +L FL+V SPYN I+ R W+ KM+ +PST HQ++ Y
Sbjct: 152 TSLSDVVLPVQVGPVTLNIQFLMVDDLSPYNPIMRRAWLRKMKVIPSTYHQMVSY 206
>gi|147777291|emb|CAN60289.1| hypothetical protein VITISV_011784 [Vitis vinifera]
Length = 884
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 63/106 (59%)
Query: 61 QSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSG 120
+ PH DAL++++ +G+ +KRIL+D GSS ++L A +++M ++ + L G +G
Sbjct: 441 EHPHRDALILALGVGDFDMKRILVDPGSSADLLQVAVIKQMGFIPSSLENPGRILSGFNG 500
Query: 121 IVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMR 166
T S G ITL V A L F VV+ S +N ILGR W+H M+
Sbjct: 501 SSTTSLGDITLPVQAGPVILNILFSVVEDLSHFNAILGRTWLHGMK 546
>gi|78708084|gb|ABB47059.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 310
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L + I V R+L+D G++VN++ + +++ D++K L G +G T
Sbjct: 123 HMKPLYLKGHIDGKPVSRMLVDRGAAVNLMPYSLFKRLGRGDDELKKTNMILNGFNGEPT 182
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
+ G+ ++ + + +L T F +V YNVILGR WIH VPST HQ L
Sbjct: 183 EAKGIFSVELTMGNKTLPTTFFIVDVQGSYNVILGRCWIHANCCVPSTLHQCLIQWDGDD 242
Query: 184 IEEIRGDQATAWACA 198
+E ++ D +T A A
Sbjct: 243 VEIVQADTSTEVAMA 257
>gi|147774655|emb|CAN67703.1| hypothetical protein VITISV_035851 [Vitis vinifera]
Length = 335
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 65/117 (55%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F P DL + PH AL++++ I + V+RIL+D GSS N+L + ++M ++
Sbjct: 187 ITFPPIDLNRVLQPHQYALILTLGINDFDVRRILVDPGSSANLLQMSAFKQMGFPLPALE 246
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMR 166
+ L+G +G+ T S + L V L F +V+ S +N I+GR W+H M+
Sbjct: 247 NLRRILLGFNGVSTTSLADVVLPVQDGPVILNIQFFMVEDLSLFNAIMGRTWLHDMK 303
>gi|222635554|gb|EEE65686.1| hypothetical protein OsJ_21305 [Oryza sativa Japonica Group]
Length = 1397
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 73/134 (54%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F +DL L H+ L++ +I + RI++D+GS++N+L T++K+ + +
Sbjct: 1087 MTFTEEDLLLGNKKHNRPLLMYGEIDDLPTNRIMVDDGSAINLLPLRTLKKIGYSRRDLN 1146
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ G + + G I+L++ + S F ++ A + YN +LGR W+H+ + VP
Sbjct: 1147 RSNVVIHGFNQAGQEALGTISLVLKLEPLSTYVTFHIIDAATSYNALLGRPWLHENQVVP 1206
Query: 170 STCHQVLCYQTIYG 183
ST HQ + Y+ G
Sbjct: 1207 STLHQCIKYKDKSG 1220
>gi|147810824|emb|CAN65034.1| hypothetical protein VITISV_041070 [Vitis vinifera]
Length = 475
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 63/120 (52%), Gaps = 23/120 (19%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S+ IG+ V+R+L+D GSS +++ + +
Sbjct: 379 FPPVDPTRTLQPHRDALILSLGIGDFDVRRVLVDPGSSADLVQASVI------------- 425
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
G + + D I L V A +L F VV+ SP+NVILGR W+H M+A+PST
Sbjct: 426 --------GHMGHRD--IILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 475
Score = 36.2 bits (82), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A ++E C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQIEACSMDAVLQIFKRSICPGTPFFESLAK 158
>gi|147775223|emb|CAN61598.1| hypothetical protein VITISV_013024 [Vitis vinifera]
Length = 510
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 52/87 (59%)
Query: 115 LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
L G +G T S G I L V A +L FLVV+ SP+NVILGR W+H M+A+PST HQ
Sbjct: 403 LSGFNGSSTTSLGDIILPVQAGPVTLNVQFLVVQELSPFNVILGRTWLHYMKAIPSTYHQ 462
Query: 175 VLCYQTIYGIEEIRGDQATAWACAVLA 201
++ + T G ++ G Q A C +A
Sbjct: 463 MVSFLTNDGQIDLYGSQLAARQCYQIA 489
>gi|147854117|emb|CAN78581.1| hypothetical protein VITISV_013553 [Vitis vinifera]
Length = 509
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 69/150 (46%), Gaps = 40/150 (26%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D P+ DAL++S++IG+ V+RIL+D G+
Sbjct: 379 FPPVDPARTLQPYSDALILSLEIGDFDVRRILVDPGN----------------------- 415
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
I L V A +L F VV+ SP+NVILGR W++ M+A+PST
Sbjct: 416 -----------------IILSVQAGPVTLNVQFSVVQELSPFNVILGRTWLYYMKAIPST 458
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 459 YHQMVSFLTNDGQIDLYGSQLAARQCYQIA 488
Score = 36.2 bits (82), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A ++E C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQIEACSMDAVLQIFKRSICPGTPFFESLAK 158
>gi|147800185|emb|CAN73110.1| hypothetical protein VITISV_013435 [Vitis vinifera]
Length = 500
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 51/87 (58%)
Query: 115 LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
L G +G T S G I L V A +L F VV+ SP+N+ILGR W+H M+A+PST HQ
Sbjct: 393 LSGFNGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPSTYHQ 452
Query: 175 VLCYQTIYGIEEIRGDQATAWACAVLA 201
++ + T G ++ G Q A C +A
Sbjct: 453 MVSFLTNEGQTDLYGSQLAARQCYQIA 479
>gi|356510620|ref|XP_003524035.1| PREDICTED: uncharacterized protein LOC100801712 [Glycine max]
Length = 1186
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H+ AL +S+K + +V ++LIDNGSS+N++ +T+EK+ +K +
Sbjct: 304 HNKALHVSVKCIDHVVAKVLIDNGSSLNVMPTSTLEKLPFNASHLKPSSMVVRAFDDTRR 363
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCY 178
G I L V ++ F ++ PY+ +LGR WIH + VPST HQ L +
Sbjct: 364 EVRGEIDLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVPSTLHQKLKF 418
>gi|356502140|ref|XP_003519879.1| PREDICTED: uncharacterized protein LOC100786989 [Glycine max]
Length = 2002
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 10/163 (6%)
Query: 37 LPSNHPFFESLSEVSFLPQDLKLIQSP------HDDALVISIKIGNCLVKRILIDNGSSV 90
LPS ++ SEV+ + + L + P H L I K+ N + ++LID G++V
Sbjct: 879 LPSE---YDVQSEVTEIEKQLAYFEKPDFQMKSHLKPLFIRAKVENIGINKVLIDGGAAV 935
Query: 91 NILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKAT 150
N++ + + K+ + L G S G I + V S T FLV+++
Sbjct: 936 NLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTGYSLGAIQVDVAVGSIVRPTLFLVIQSK 995
Query: 151 SPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGI-EEIRGDQA 192
+ +N++LGR+WIH + AVPST HQ L GI E I DQ+
Sbjct: 996 ANFNLLLGREWIHGVGAVPSTLHQKLIIWREDGIVENIEADQS 1038
>gi|147807393|emb|CAN66195.1| hypothetical protein VITISV_005139 [Vitis vinifera]
Length = 506
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%)
Query: 83 LIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLT 142
L+ SS +++ + V M ++ + L G +G T S G I + V A +L
Sbjct: 367 LVPGSSSADLVQASVVSHMGHNLAGLENLGRILSGFNGSSTTSLGDIVMSVQAGPVTLNI 426
Query: 143 DFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
F VV+ SP+N+ILGR W+H M+A+PST HQ + + T G ++ G Q A C +A
Sbjct: 427 QFSVVQELSPFNIILGRTWLHYMKAIPSTYHQKVSFLTNEGQIDLYGSQLAARQCYQIA 485
Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C+ + + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQVEACNMDVVLQIFKRSICPXTPFFESLAK 158
>gi|218198159|gb|EEC80586.1| hypothetical protein OsI_22922 [Oryza sativa Indica Group]
Length = 1510
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 72/134 (53%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F +DL L H+ L++ +I + RI++D GS++N+L T++K+ + +
Sbjct: 1195 MTFTEEDLLLGNKKHNRLLLMYGEIDDLPTNRIMVDGGSAINLLPLRTLKKIGYSRRDLN 1254
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ G + + G I+L++ + S F ++ A + YN +LGR W+H+ + VP
Sbjct: 1255 RSNVVIHGFNQAGQEALGTISLVLKLEPLSTYVTFHIIDAATSYNALLGRPWLHENQVVP 1314
Query: 170 STCHQVLCYQTIYG 183
ST HQ + Y+ G
Sbjct: 1315 STLHQCIKYKDKSG 1328
>gi|147815737|emb|CAN68206.1| hypothetical protein VITISV_019388 [Vitis vinifera]
Length = 466
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 54/95 (56%)
Query: 115 LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
L G +G T S G I L V A +L FLVV+ SP+NVILGR W+H M+A+P T HQ
Sbjct: 359 LSGFNGSSTTSLGDIVLSVQAGPVTLNVQFLVVQDLSPFNVILGRTWLHYMKAIPYTYHQ 418
Query: 175 VLCYQTIYGIEEIRGDQATAWACAVLALKETKRKD 209
++ + T G ++ G Q A C +A + +D
Sbjct: 419 MVSFLTKDGQIDLYGSQLAARQCYQIAREAGTSQD 453
>gi|356537315|ref|XP_003537174.1| PREDICTED: uncharacterized protein LOC100793719 [Glycine max]
Length = 2128
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N + ++LID G++VN++ + + K+ + L G
Sbjct: 934 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S G I + V+ S T FLV+++ + +N++LGR+WIH + AVPST HQ L G
Sbjct: 994 YSLGAIQVDVVVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1053
Query: 184 I-EEIRGDQA 192
I E I DQ+
Sbjct: 1054 IVENIEADQS 1063
>gi|356554623|ref|XP_003545644.1| PREDICTED: uncharacterized protein LOC100789762 [Glycine max]
Length = 2243
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N + ++LID G++VN++ + + K+ + L G
Sbjct: 919 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 978
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S G I + V+ S T FLV+++ + +N++LGR+WIH + AVPST HQ L G
Sbjct: 979 YSLGAIQVDVVVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1038
Query: 184 I-EEIRGDQA 192
I E I DQ+
Sbjct: 1039 IVENIEADQS 1048
>gi|356507082|ref|XP_003522300.1| PREDICTED: uncharacterized protein LOC100801149 [Glycine max]
Length = 2075
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N + ++LID G++VN++ + + K+ + L G
Sbjct: 934 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S G I + V+ S T FLV+++ + +N++LGR+WIH + AVPST HQ L G
Sbjct: 994 YSLGAIQVDVVVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1053
Query: 184 I-EEIRGDQA 192
I E I DQ+
Sbjct: 1054 IVENIEADQS 1063
>gi|89179378|gb|ABD63115.1| hypothetical protein 18.t00011 [Asparagus officinalis]
Length = 887
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%)
Query: 60 IQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLS 119
+++PHDD LVI++ I LVKRI+ID GS +++L + +M +++ + LF PL+G S
Sbjct: 125 VETPHDDPLVITVVINGYLVKRIMIDTGSLMDVLYTSAFNRMGIDKSHLLLFRGPLVGFS 184
Query: 120 GIVTNSDGVITLLVIAKSY 138
G+ +G+ITL + Y
Sbjct: 185 GLALLPEGMITLTFVLGEY 203
>gi|147787922|emb|CAN76129.1| hypothetical protein VITISV_043916 [Vitis vinifera]
Length = 340
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 23/173 (13%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F P + + PH+ LV+++ + V+R+LID GSS N+L + ++M ++
Sbjct: 184 ITFPPINASRVLQPHEYVLVLTLGMSGFDVRRVLIDPGSSANLLQMSAYKQMGYSLSTLE 243
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ L +G T S + V+ S +NVI+GR W+H+++ +P
Sbjct: 244 NPGRILSRFNGATTTSQXDV----------------VLPDLSHFNVIMGRAWLHRIKVIP 287
Query: 170 STCHQVLCYQTIYGIEEIRGDQATAWACAVLAL-------KETKRKDSNFENQ 215
S HQ++ Y T G + G Q C +AL +E + + SN Q
Sbjct: 288 SMYHQMVSYLTEEGQIDFLGSQLATHQCYQVALDSGHLASEEMRLESSNTRKQ 340
>gi|356507113|ref|XP_003522315.1| PREDICTED: uncharacterized protein LOC100818573 [Glycine max]
Length = 2203
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N + ++LID G++VN++ + + K+ + L G
Sbjct: 934 HLKPLFIRAKVENIGINKVLIDGGAAVNLMPRSMLHKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S G I + V S T FLV+++ + +N++LGR+WIH + AVPST HQ L G
Sbjct: 994 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1053
Query: 184 I-EEIRGDQA 192
I E I DQ+
Sbjct: 1054 IVENIEADQS 1063
>gi|356561598|ref|XP_003549068.1| PREDICTED: uncharacterized protein LOC100789798 [Glycine max]
Length = 2277
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N + ++LID G++VN++ + + K+ + L G
Sbjct: 902 HLKPLFIRAKVENIGINKVLIDGGAAVNLMPRSMLHKIGKHDTDLSAHNIVLSNYEGKTG 961
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S G I + V S T FLV+++ + +N++LGR+WIH + AVPST HQ L G
Sbjct: 962 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1021
Query: 184 I-EEIRGDQA 192
I E I DQ+
Sbjct: 1022 IVENIEADQS 1031
>gi|147821377|emb|CAN65668.1| hypothetical protein VITISV_022190 [Vitis vinifera]
Length = 451
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 115 LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
L G +G+ T S G I L V A +L F VV+ SP+NVILGR W+H M+ +PST HQ
Sbjct: 344 LSGFNGVTTTSLGDIVLSVQAGPITLNVQFSVVQDLSPFNVILGRTWLHYMKVIPSTYHQ 403
Query: 175 VLCYQTIYGIEEIRGDQATAWACAVLA 201
++ + T G + G Q A C +A
Sbjct: 404 MVSFLTEDGQINLYGSQLAARQCYQIA 430
>gi|356569582|ref|XP_003552978.1| PREDICTED: uncharacterized protein LOC100797050 [Glycine max]
Length = 2073
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N + ++LID G++VN++ + + K+ + L G
Sbjct: 879 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPQSMLYKIGKHDTDLSAHNIVLSNYEGKTG 938
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S G I + V S T FLV+++ + +N++LGR+WIH + AVPST HQ L G
Sbjct: 939 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 998
Query: 184 I-EEIRGDQA 192
I E I DQ+
Sbjct: 999 IVENIEADQS 1008
>gi|356574214|ref|XP_003555246.1| PREDICTED: uncharacterized protein LOC100788106 [Glycine max]
Length = 2203
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N + ++LID G++VN++ + + K+ + L G
Sbjct: 934 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S G I + V S T FLV+++ + +N++LGR+WIH + AVPST HQ L G
Sbjct: 994 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1053
Query: 184 I-EEIRGDQA 192
I E I DQ+
Sbjct: 1054 IVENIEADQS 1063
>gi|356569818|ref|XP_003553092.1| PREDICTED: uncharacterized protein LOC100807161 [Glycine max]
Length = 2650
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N + ++LID G++VN++ + + K+ + L G
Sbjct: 1266 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTD 1325
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S G I + V S T FLV+++ + +N++LGR+WIH + AVPST HQ L G
Sbjct: 1326 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1385
Query: 184 I-EEIRGDQA 192
I E I DQ+
Sbjct: 1386 IVENIEADQS 1395
>gi|356553674|ref|XP_003545178.1| PREDICTED: uncharacterized protein LOC100783555 [Glycine max]
Length = 2312
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N + ++LID G++VN++ + + K+ + L G
Sbjct: 934 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S G I + V S T FLV+++ + +N++LGR+WIH + AVPST HQ L G
Sbjct: 994 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1053
Query: 184 I-EEIRGDQA 192
I E I DQ+
Sbjct: 1054 IVENIEADQS 1063
>gi|356506259|ref|XP_003521904.1| PREDICTED: uncharacterized protein LOC100796526 [Glycine max]
Length = 2119
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N + ++LID G++VN++ + + K+ + L G
Sbjct: 893 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 952
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S G I + V S T FLV+++ + +N++LGR+WIH + AVPST HQ L G
Sbjct: 953 YSLGAIQVDVAVGSVVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1012
Query: 184 I-EEIRGDQA 192
I E I DQ+
Sbjct: 1013 IVENIEADQS 1022
>gi|356570574|ref|XP_003553460.1| PREDICTED: uncharacterized protein LOC100782050 [Glycine max]
Length = 2129
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N + ++LID G++VN++ + + K+ + L G
Sbjct: 934 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S G I + V S T FLV+++ + +N++LGR+WIH + AVPST HQ L G
Sbjct: 994 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1053
Query: 184 I-EEIRGDQA 192
I E I DQ+
Sbjct: 1054 IVENIEADQS 1063
>gi|356551699|ref|XP_003544211.1| PREDICTED: uncharacterized protein LOC100802634 [Glycine max]
Length = 2201
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N + ++LID G++VN++ + + K+ + L G
Sbjct: 899 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 958
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S G I + V S T FLV+++ + +N++LGR+WIH + AVPST HQ L G
Sbjct: 959 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1018
Query: 184 I-EEIRGDQA 192
I E I DQ+
Sbjct: 1019 IVENIEADQS 1028
>gi|356494941|ref|XP_003516339.1| PREDICTED: uncharacterized protein LOC100810819 [Glycine max]
Length = 2238
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N + ++LID G++VN++ + + K+ + L G
Sbjct: 934 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S G I + V S T FLV+++ + +N++LGR+WIH + AVPST HQ L G
Sbjct: 994 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1053
Query: 184 I-EEIRGDQA 192
I E I DQ+
Sbjct: 1054 IVENIEADQS 1063
>gi|356540662|ref|XP_003538805.1| PREDICTED: uncharacterized protein LOC100806642 [Glycine max]
Length = 1995
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N + ++LID G++VN++ + + K+ + L G
Sbjct: 851 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 910
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S G I + V S T FLV+++ + +N++LGR+WIH + AVPST HQ L G
Sbjct: 911 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 970
Query: 184 I-EEIRGDQA 192
I E I DQ+
Sbjct: 971 IVENIEADQS 980
>gi|356503115|ref|XP_003520357.1| PREDICTED: uncharacterized protein LOC100809115 [Glycine max]
Length = 2203
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N + ++LID G++VN++ + + K+ + L G
Sbjct: 934 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S G I + V S T FLV+++ + +N++LGR+WIH + AVPST HQ L G
Sbjct: 994 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1053
Query: 184 I-EEIRGDQA 192
I E I DQ+
Sbjct: 1054 IVENIEADQS 1063
>gi|356514268|ref|XP_003525828.1| PREDICTED: uncharacterized protein LOC100776741 [Glycine max]
Length = 2128
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N + ++LID G++VN++ + + K+ + L G
Sbjct: 934 HLKPLFIRAKVENVGINKVLIDEGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S G I + V S T FLV+++ + +N++LGR+WIH + AVPST HQ L G
Sbjct: 994 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1053
Query: 184 I-EEIRGDQA 192
I E I DQ+
Sbjct: 1054 IVENIEADQS 1063
>gi|356503081|ref|XP_003520340.1| PREDICTED: uncharacterized protein LOC100788952 [Glycine max]
Length = 2160
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N + ++LID G++VN++ + + K+ + L G
Sbjct: 934 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S G I + V S T FLV+++ + +N++LGR+WIH + AVPST HQ L G
Sbjct: 994 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1053
Query: 184 I-EEIRGDQA 192
I E I DQ+
Sbjct: 1054 IVENIEADQS 1063
>gi|356562251|ref|XP_003549385.1| PREDICTED: uncharacterized protein LOC100784663 [Glycine max]
Length = 2160
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N + ++LID G++VN++ + + K+ + L G
Sbjct: 934 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S G I + V S T FLV+++ + +N++LGR+WIH + AVPST HQ L G
Sbjct: 994 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1053
Query: 184 I-EEIRGDQA 192
I E I DQ+
Sbjct: 1054 IVENIEADQS 1063
>gi|356529936|ref|XP_003533542.1| PREDICTED: uncharacterized protein LOC100788921 [Glycine max]
Length = 2189
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N + ++LID G++VN++ + + K+ + L G
Sbjct: 919 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 978
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S G I + V S T FLV+++ + +N++LGR+WIH + AVPST HQ L G
Sbjct: 979 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1038
Query: 184 I-EEIRGDQA 192
I E I DQ+
Sbjct: 1039 IVENIEADQS 1048
>gi|224107098|ref|XP_002314375.1| predicted protein [Populus trichocarpa]
gi|222863415|gb|EEF00546.1| predicted protein [Populus trichocarpa]
Length = 1335
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 72/133 (54%), Gaps = 4/133 (3%)
Query: 48 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDK 107
+E+SF +DL L H+ L I + +V RIL+D+GS+VNIL T++++ + D
Sbjct: 733 TEISFNDEDLLLGSKLHNRPLFIKGYVDQKMVNRILVDDGSAVNILPLKTMKELGIPMD- 791
Query: 108 IKLFEQPLI--GLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKM 165
+LF L+ G + N+ G I L + + F V+ A + YN++LGR W+H+
Sbjct: 792 -ELFPSHLMIQGFNQGGQNAIGKIRLAMHMEDMESNALFHVIDAKTTYNMLLGRPWMHEN 850
Query: 166 RAVPSTCHQVLCY 178
+ ST HQ Y
Sbjct: 851 GIISSTLHQCFKY 863
>gi|356523519|ref|XP_003530385.1| PREDICTED: uncharacterized protein LOC100799804 [Glycine max]
Length = 2073
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N + ++LID G++VN++ + + K+ + L G
Sbjct: 890 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 949
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S G I + V S T FLV+++ + +N++LGR+WIH + AVPST HQ L G
Sbjct: 950 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1009
Query: 184 I-EEIRGDQA 192
I E I DQ+
Sbjct: 1010 IVENIEADQS 1019
>gi|356573839|ref|XP_003555063.1| PREDICTED: uncharacterized protein LOC100787746 [Glycine max]
Length = 2219
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N + ++LID G++VN++ + + K+ + L G
Sbjct: 884 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKRDTDLSAHNIVLSNYEGKTG 943
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S G I + V S T FLV+++ + +N++LGR+WIH + AVPST HQ L G
Sbjct: 944 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1003
Query: 184 I-EEIRGDQA 192
I E I DQ+
Sbjct: 1004 IVENIEADQS 1013
>gi|356551735|ref|XP_003544229.1| PREDICTED: uncharacterized protein LOC100817039 [Glycine max]
Length = 2179
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N + ++LID G++VN++ + + K+ + L G
Sbjct: 910 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 969
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S G I + V S T FLV+++ + +N++LGR+WIH + AVPST HQ L G
Sbjct: 970 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1029
Query: 184 I-EEIRGDQA 192
I E I DQ+
Sbjct: 1030 IVENIEADQS 1039
>gi|147859576|emb|CAN79252.1| hypothetical protein VITISV_038224 [Vitis vinifera]
Length = 479
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 51/87 (58%)
Query: 115 LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
L G +G T S G I L V A +L F VV+ SP+N+ILGR W+H M+A+PST HQ
Sbjct: 372 LSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQDLSPFNIILGRTWLHYMKAIPSTYHQ 431
Query: 175 VLCYQTIYGIEEIRGDQATAWACAVLA 201
++ + T G ++ G Q A C +A
Sbjct: 432 MVSFLTNNGQIDLYGSQLAARQCYQIA 458
>gi|356557646|ref|XP_003547126.1| PREDICTED: uncharacterized protein LOC100799454 [Glycine max]
Length = 1921
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N + ++LID G++VN++ + + K+ + L G
Sbjct: 652 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 711
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S G I + V S T FLV+++ + +N++LGR+WIH + AVPST HQ L G
Sbjct: 712 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 771
Query: 184 I-EEIRGDQA 192
I E I DQ+
Sbjct: 772 IVENIEADQS 781
>gi|356532475|ref|XP_003534798.1| PREDICTED: uncharacterized protein LOC100806767 [Glycine max]
Length = 2160
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N + ++LID G++VN++ + + K+ + L G
Sbjct: 934 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S G I + V S T FLV+++ + +N++LGR+WIH + AVPST HQ L G
Sbjct: 994 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1053
Query: 184 I-EEIRGDQA 192
I E I DQ+
Sbjct: 1054 IVENIEADQS 1063
>gi|18568275|gb|AAL76007.1|AF466646_15 prpol [Zea mays]
Length = 1317
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F +DL+L PH+DA+VIS I LV +L+D GS+ +I+ +M+ +DKI
Sbjct: 60 ITFSQEDLQLKDYPHNDAMVISCVIKGFLVHNVLVDTGSAADIIFAKAFRQMQEPEDKIH 119
Query: 110 LFEQPLIGLSGIVTNSDGVITLLV----IAKSYSLLTDFLVVKATSPYNVILGRQWIHKM 165
PL G G + G IT+ V I + + F +V PYN I+GR ++
Sbjct: 120 DATHPLCGFGGRQIVALGKITMSVTFGFINNTRTEQVVFDIVDMEYPYNAIIGRGTLNAF 179
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATA 194
A+ + + + G I G Q A
Sbjct: 180 EAILHPAYLCMKIPSDQGPIAIHGSQEAA 208
>gi|356570109|ref|XP_003553233.1| PREDICTED: uncharacterized protein LOC100808063 [Glycine max]
Length = 1626
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N V ++LID G++VN++ + + ++ + L G
Sbjct: 500 HLKPLFIRAKVENVGVNKVLIDGGAAVNLMPRSMLYRIGKHDTDLSAHNIVLSNYEGKTG 559
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S G I + V S T FLV+++ + +N++LGR+WIH + AVPST HQ L G
Sbjct: 560 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 619
Query: 184 I-EEIRGDQA 192
I E I DQ+
Sbjct: 620 IVENIEADQS 629
>gi|356510705|ref|XP_003524076.1| PREDICTED: uncharacterized protein LOC100807907 [Glycine max]
Length = 2060
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N + ++LID G+++N++ + + K+ + L G
Sbjct: 877 HLKPLFIRAKVENVGINKVLIDGGAAINLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 936
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S G I + V S T FLV+++ + +N++LGR+WIH + AVPST HQ L G
Sbjct: 937 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 996
Query: 184 I-EEIRGDQA 192
I E I DQ+
Sbjct: 997 IVENIEADQS 1006
>gi|356565827|ref|XP_003551138.1| PREDICTED: uncharacterized protein LOC100815866 [Glycine max]
Length = 1303
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 61/115 (53%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H+ AL +S++ + +V ++LIDNGSS+N++ T+EK+ ++K + G
Sbjct: 384 HNKALHVSVRCMDHVVAKVLIDNGSSLNVMPKTTLEKLPFSVSRLKPSSMVVRAFDGTRR 443
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCY 178
G I + + ++ F V+ Y+ +LGR WIH + VPST HQ L +
Sbjct: 444 EVMGEIDIPIQIGPHTCNVVFQVMDINPAYSCLLGRPWIHALGVVPSTLHQKLKF 498
>gi|356561548|ref|XP_003549043.1| PREDICTED: uncharacterized protein LOC100813354 [Glycine max]
Length = 2129
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N + ++LID G++VN++ + + K+ + L G
Sbjct: 934 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S G I + V S T FLV+++ + +N++LGR+WIH + AVPST HQ L G
Sbjct: 994 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1053
Query: 184 I-EEIRGDQA 192
I E + DQ+
Sbjct: 1054 IVENMEADQS 1063
>gi|18092334|gb|AAL59226.1|AF448416_3 Cinful1 polyprotein [Zea mays]
Length = 376
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F +DL+L PH+DA+VIS I LV +L+D GS+ +I+ +M+ +DKI
Sbjct: 60 ITFSQEDLQLKDYPHNDAMVISCVIKGFLVHNVLVDTGSAADIIFAKAFRQMQEPEDKIH 119
Query: 110 LFEQPLIGLSGIVTNSDGVITLLV----IAKSYSLLTDFLVVKATSPYNVILGRQWIHKM 165
PL G G + G IT+ + I + + F +V PYN I+GR ++
Sbjct: 120 DATHPLCGFGGRQIVALGKITMPITFGFINNTRTEQVVFDIVDMEYPYNAIIGRGTLNAF 179
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATA 194
A+ + + + G I G Q A
Sbjct: 180 EAILHPAYLCMKIPSDQGPIAIHGSQEAA 208
>gi|77553946|gb|ABA96742.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 553
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 70/141 (49%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I+ + + ++++D G++VN++ AT K+ D + L G +
Sbjct: 118 HLKPLYINGFVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNPDDLIKTNMVLKDFGGNPS 177
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
+ V+ + + S ++ T FLV+ Y+++LGR WIH R +PST HQ L
Sbjct: 178 ETKRVLNVELTVGSKTVPTTFLVIDGKGSYSLLLGRDWIHANRCIPSTMHQCLIQWQGDK 237
Query: 184 IEEIRGDQATAWACAVLALKE 204
IE + D++ A A LAL E
Sbjct: 238 IEIVPADRSVNVANADLALWE 258
>gi|4206306|gb|AAD11615.1| prpol [Zea mays]
Length = 1317
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F +DL+L PH+DA+VIS I LV +L+D GS+ +I+ +M+ +DKI
Sbjct: 60 ITFSQEDLQLKDYPHNDAMVISCVIKGFLVHNVLVDTGSAADIIFAKAFRQMQELEDKIH 119
Query: 110 LFEQPLIGLSGIVTNSDGVITLLV----IAKSYSLLTDFLVVKATSPYNVILGRQWIHKM 165
PL G G + G IT+ V I + + F +V PYN I+GR ++
Sbjct: 120 DATHPLCGFGGRQIVALGKITMSVTFGFINNTRTEQVVFDIVDMEYPYNAIIGRGTLNAF 179
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATA 194
A+ + + + G I G Q A
Sbjct: 180 EAILHPAYLCMKMPSDQGPIAIHGSQEAA 208
>gi|147859755|emb|CAN82920.1| hypothetical protein VITISV_029583 [Vitis vinifera]
Length = 354
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F P D I PH DAL++++ I + D + ++KM ++
Sbjct: 205 ITFSPIDPNCILRPHRDALILTLGISD----------------FDVSVIKKMGFVPTNLE 248
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ L+G +G T S G I L V +L F VV+ SP+N ILG W+H M+A+P
Sbjct: 249 NPGRILLGFNGAFTTSLGDIVLPVQVCLVTLNVQFSVVEDLSPFNAILGCAWLHGMKAIP 308
Query: 170 STCHQVLCYQTIYGIEEIRGDQATAW 195
ST HQ++ + D AT W
Sbjct: 309 STYHQMVI--------NWQPDSATKW 326
>gi|147854945|emb|CAN82409.1| hypothetical protein VITISV_023301 [Vitis vinifera]
Length = 985
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 53/91 (58%)
Query: 118 LSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLC 177
+G T S G I L V A +L F VV+ SP+NVILGR W+H M+A+PST HQ++
Sbjct: 18 FNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQMVS 77
Query: 178 YQTIYGIEEIRGDQATAWACAVLALKETKRK 208
+ T G ++ G Q A C +AL K++
Sbjct: 78 FLTNDGQIDLYGSQLAARQCYQIALVVPKKE 108
>gi|38347142|emb|CAD39495.2| OSJNBa0039G19.2 [Oryza sativa Japonica Group]
Length = 1136
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 2/142 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D G++VN++ AT K+ R +D IK L G
Sbjct: 373 HLKPLYINGYVNEKPMSKMMVDGGAAVNLMPYATFRKLGRNTEDLIKT-SMVLKDFGGNP 431
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
+ + GV+ L + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 432 SETKGVLNLELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCLIQWQGN 491
Query: 183 GIEEIRGDQATAWACAVLALKE 204
IE + D++ A A LAL E
Sbjct: 492 KIEIVLADKSVNVASADLALWE 513
>gi|21672041|gb|AAM74403.1|AC120497_3 Putative retroelement [Oryza sativa Japonica Group]
Length = 1844
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 62/120 (51%)
Query: 79 VKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSY 138
V R+L+D ++VN++ + + + E D++K L G +G T + G+ + + +
Sbjct: 1013 VSRMLVDGDAAVNLMPYSLFKMLGREDDELKKTNMILNGFNGEPTEAKGIFSAELTVGNK 1072
Query: 139 SLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACA 198
+L T F +V YNVILGR WIH VPST HQ L +E ++ D + A A
Sbjct: 1073 TLPTAFFIVNVQGNYNVILGRCWIHANCCVPSTLHQCLIQWDGDDVEIVQADTSAEVAMA 1132
>gi|224115960|ref|XP_002317171.1| predicted protein [Populus trichocarpa]
gi|222860236|gb|EEE97783.1| predicted protein [Populus trichocarpa]
Length = 1012
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 26/193 (13%)
Query: 10 YIRRFRLASAKVENC------------------DDQLA----IVTFKRGLPSNHPFFESL 47
Y + RL S VE C DD++A T SN
Sbjct: 399 YCKYHRLISHPVEKCFVLKDKIMRLHENGDIVFDDEIAASNITTTKSHDDSSNLSHGVCT 458
Query: 48 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDK 107
+E+SF +DL L H+ L I + +V RIL+D+GS+VNIL T++++ + D
Sbjct: 459 TEISFNDEDLLLGSKLHNRPLFIKGYVDEKIVNRILVDDGSAVNILPLKTMKELGIPMD- 517
Query: 108 IKLFEQPLI--GLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKM 165
+LF L+ G + N+ G I L + + F V+ A + YN++LGR WIH+
Sbjct: 518 -ELFPSHLMIQGFNQGGQNAIGKIRLAMHMEDMESNALFHVIDAKTTYNMLLGRPWIHEN 576
Query: 166 RAVPSTCHQVLCY 178
+ ST +Q Y
Sbjct: 577 GIISSTLYQCFKY 589
>gi|147835299|emb|CAN67790.1| hypothetical protein VITISV_041882 [Vitis vinifera]
Length = 387
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%)
Query: 69 VISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGV 128
V S +I + V+RIL+D SS ++L + +++M ++ L G +G T S G
Sbjct: 240 VDSNRIFDFDVRRILVDPSSSTDLLQVSVIKQMGFSPSNMEKPGWILSGFNGASTTSLGN 299
Query: 129 ITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQT 180
I L V A +L F +V+ SP+N ILG +H M+ +PST HQ++ Y T
Sbjct: 300 IVLPVQADPVTLNVQFSIVEDLSPFNAILGSTLLHGMKVIPSTYHQMVSYLT 351
>gi|89179403|gb|ABD63139.1| Reverse transcriptase family protein [Asparagus officinalis]
Length = 1181
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 3/143 (2%)
Query: 46 SLSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQ 105
SL +SF +D++ ++ HD L + IG+ + R+ +D GS+++I+ ++ + +
Sbjct: 160 SLPCISFTQEDMQ-VKHEHDRPLYYTGYIGSSEISRVQVDPGSALSIMPYRVMQVLGIPM 218
Query: 106 DKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKM 165
++ + + G + T G I L ++ A + YN++LGR WIH
Sbjct: 219 HRLHTTQTTIFGFNANSTRPLGKIKLRCQIGDLKSEVACYIIDADTSYNLLLGRPWIHAN 278
Query: 166 RAVPSTCHQVLCYQTIYGIEEIR 188
R VPST HQV+ Y G E+R
Sbjct: 279 RIVPSTLHQVMKYANDEG--EVR 299
>gi|356561618|ref|XP_003549078.1| PREDICTED: uncharacterized protein LOC100797724 [Glycine max]
Length = 2163
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N + + LID G++VN++ + + K+ + L G
Sbjct: 934 HLKPLFIRAKVENVGINKELIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
S G I + V S T FLV+++ + +N++LGR+WIH + AVPST HQ L G
Sbjct: 994 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLVIWREDG 1053
Query: 184 I-EEIRGDQA 192
I E I DQ+
Sbjct: 1054 IVENIEADQS 1063
>gi|38347673|emb|CAE05607.2| OSJNBa0054D14.8 [Oryza sativa Japonica Group]
Length = 1702
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L +I V R+ +D G VN++ + +K+ DK+K L G +G T
Sbjct: 775 HMKPLYRKGRIDGKPVSRMQVDGGVVVNLMPYSLFKKLGCGDDKLKKTNMILNGFNGEPT 834
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ G+ ++ + A + +L T F +V YNVILG WIH VPST HQ L
Sbjct: 835 EAKGIFSVELTAGNKTLPTGFFIVDVQGNYNVILGHCWIHANCCVPSTLHQCL 887
>gi|224150480|ref|XP_002336963.1| predicted protein [Populus trichocarpa]
gi|222837468|gb|EEE75847.1| predicted protein [Populus trichocarpa]
Length = 414
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 4/134 (2%)
Query: 47 LSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQD 106
++E+SF +DL L H+ I + +V RIL+D+GS+VNIL T++++ + D
Sbjct: 233 ITEISFNDEDLLLGSKLHNRLPFIKGYVDEKMVNRILVDDGSAVNILPLKTMKELGIPMD 292
Query: 107 KIKLFEQPLI--GLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHK 164
+ LF L+ G + N+ G I L + + F V+ + YN++LGR WIH+
Sbjct: 293 E--LFPSHLMIQGFNQEGQNAIGKIRLAIHMEDMKFNALFHVIDVKTTYNMLLGRPWIHE 350
Query: 165 MRAVPSTCHQVLCY 178
+ ST HQ Y
Sbjct: 351 NGIISSTLHQCFKY 364
>gi|147792271|emb|CAN68042.1| hypothetical protein VITISV_039276 [Vitis vinifera]
Length = 513
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 8/196 (4%)
Query: 11 IRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSEVSFLPQDLK--LIQSPHDDAL 68
+++F +VE+ + FKR + FFESL++ LP + L ++ L
Sbjct: 1 MKQFEKVXLQVESXSIDAILQIFKRNIXPGXSFFESLAKK--LPATMNDLLRRANKYSML 58
Query: 69 VISIKIGNCLVKRILIDN----GSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTN 124
G ++I +D GSS ++L + ++M ++ L +G T
Sbjct: 59 EDDTSDGQSRSRQIQLDEIGTKGSSTDLLQMSAYKQMGYSPSTLENLRCLLSEFNGATTT 118
Query: 125 SDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGI 184
S G + V A +L F +V YN I+GR W+HKM+ +P T HQ++ Y T G
Sbjct: 119 SLGDVXXPVQAXPITLNVQFSMVDDLXXYNAIMGRAWLHKMKVIPYTYHQMVSYLTEEGQ 178
Query: 185 EEIRGDQATAWACAVL 200
+ G+Q C L
Sbjct: 179 VNLXGNQLATRQCYQL 194
>gi|19881654|gb|AAM01055.1|AC091735_28 putative pol polyprotein [Oryza sativa Japonica Group]
Length = 1508
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 62/120 (51%)
Query: 79 VKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSY 138
V R+L+D ++VN++ + + + E D++K L G +G T + G+ + + +
Sbjct: 842 VSRMLVDGDAAVNLMPYSLFKMLGREDDELKKTNMILNGFNGEPTEAKGIFSAELTVGNK 901
Query: 139 SLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACA 198
+L T F +V YNVILGR WIH VPST HQ L +E ++ D + A A
Sbjct: 902 TLPTAFFIVNVQGNYNVILGRCWIHANCCVPSTLHQCLIQWDGDDVEIVQADTSAEVAMA 961
>gi|357513687|ref|XP_003627132.1| Coatomer subunit zeta-3 [Medicago truncatula]
gi|355521154|gb|AET01608.1| Coatomer subunit zeta-3 [Medicago truncatula]
Length = 1280
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F ++L + H+ AL IS+ + L+ +L+D GSS+N++ T++++ ++
Sbjct: 796 FSEEELPEVGKGHNLALHISVNCKSDLISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRS 855
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ G N G I L + + L F V+ + Y+ +LGR WIH AV ST
Sbjct: 856 TFLVKAFDGSRKNVLGEIDLPITIGPENFLITFQVMDINASYSCLLGRPWIHDAGAVTST 915
Query: 172 CHQVLCY------QTIYGIEEIRGDQATAWAC 197
HQ L + TI+G E Q T+++C
Sbjct: 916 LHQKLKFIRNGKLVTIHGEEAYLVSQLTSFSC 947
>gi|224139508|ref|XP_002323146.1| predicted protein [Populus trichocarpa]
gi|222867776|gb|EEF04907.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 73/134 (54%), Gaps = 4/134 (2%)
Query: 47 LSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQD 106
++E+SF ++L L H+ I + +V RIL+D+GS++NIL T++++ + D
Sbjct: 608 ITEISFNDENLLLGSKLHNRLSFIKGYVDEKMVNRILMDDGSAINILPLKTMKELGIPMD 667
Query: 107 KIKLFEQPLI--GLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHK 164
+ LF + L+ GL+ N+ G I L + + F V+ + YN++LGR WIH+
Sbjct: 668 E--LFPRHLMIQGLNQEGQNAIGKIRLAIHMEDMKFNALFHVIDVKTTYNMLLGRPWIHE 725
Query: 165 MRAVPSTCHQVLCY 178
+ ST HQ Y
Sbjct: 726 NGIISSTLHQCFKY 739
>gi|147810474|emb|CAN63220.1| hypothetical protein VITISV_020217 [Vitis vinifera]
Length = 355
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%)
Query: 79 VKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSY 138
V+ +L+D GSSV++L + ++M ++ + L G +G +T G I L V A
Sbjct: 219 VREVLVDLGSSVDLLQMSVYKQMGYSPFALENLGRFLFGFNGDMTTFLGDILLPVQAGPI 278
Query: 139 SLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACA 198
+L F + SPYN I+GR W+ +M+ + T HQ + Y G ++ G Q A C
Sbjct: 279 TLNLQFPMADDLSPYNAIMGRAWLRRMKVIHFTYHQRVSYPIEEGQVDLLGSQLVACQCY 338
Query: 199 VLALKETKRKD 209
+AL D
Sbjct: 339 QVALDSGHPTD 349
>gi|147799109|emb|CAN63705.1| hypothetical protein VITISV_013105 [Vitis vinifera]
Length = 516
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 62/109 (56%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F P D I PH DAL++S++IG+ V+RILID GSS ++ + V M ++
Sbjct: 363 IMFPPVDPTQILHPHLDALIMSLEIGDFDVRRILIDPGSSAYLVQASVVSHMGHSLIGLE 422
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILG 158
+ L G +G+ T S G I L V A +L F +V+ SP+NVILG
Sbjct: 423 NPGRILSGFNGLSTMSLGDIVLPVQAGPVALNVQFSMVQDLSPFNVILG 471
>gi|38344460|emb|CAE04931.2| OSJNBa0017P10.8 [Oryza sativa Japonica Group]
gi|38345445|emb|CAE03297.2| OSJNBb0046P18.13 [Oryza sativa Japonica Group]
Length = 766
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 2/142 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D G+ VN++ AT K+ R +D IK+ L G
Sbjct: 354 HLKPLYINGYVNGKPMSKMMVDGGAVVNLMPYATFRKLGRNAEDLIKM-NMALKDFGGNP 412
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
+ + GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 413 SETKGVLNVELSVGSKTVPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCLIQWQGD 472
Query: 183 GIEEIRGDQATAWACAVLALKE 204
IE + D++ A A LAL E
Sbjct: 473 KIEIVPADRSVNVASADLALWE 494
>gi|108864320|gb|ABG22463.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 870
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 60 IQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGL 118
I++ H L I+ + + ++++D G++VN++ AT K R +D IK L
Sbjct: 728 IENRHLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKFGRNAEDLIKT-NMVLKDF 786
Query: 119 SGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCY 178
G + + GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 787 GGNRSETKGVLNVELTVSSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCLIQ 846
Query: 179 QTIYGIEEIRGDQATAWACAVLAL 202
+E + D++ A A LAL
Sbjct: 847 WQGDKVEIMPADRSVNVASADLAL 870
>gi|343887294|dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu]
Length = 1542
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 4/146 (2%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H+DALVI + ++RIL+D GSSV+IL + ++ M + K++ L G G
Sbjct: 548 HEDALVIKAMVAAIELRRILVDTGSSVDILFKSALDDMGISDLKLERTNTSLKGFGGGRL 607
Query: 124 NSDGVITLLVIAKSYSL----LTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQ 179
G+ L + S + F+VV+ SPY +ILGR +I + V ST + L Y+
Sbjct: 608 TPMGINELPITVGSKPFERIVMLYFVVVEERSPYQMILGRPFIRISQCVISTHYLALKYR 667
Query: 180 TIYGIEEIRGDQATAWACAVLALKET 205
+ ++G Q +C A KET
Sbjct: 668 VNGVVGVVKGVQKMTRSCYATAAKET 693
>gi|356503011|ref|XP_003520306.1| PREDICTED: uncharacterized protein LOC100807511 [Glycine max]
Length = 736
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 67/129 (51%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F +++ + H+ AL + ++ + +V +++IDNGSS+N++ T+EK+ ++K
Sbjct: 453 IAFAEEEIPVEGRGHNKALHVLVRCMDHVVAKVIIDNGSSLNVMPKTTLEKLPFSVSRLK 512
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ G G I + + ++ F V+ Y+ +LGR WIH + VP
Sbjct: 513 PSSMVVRAFDGAQREVMGEIDIPIQIGPHTCNVVFQVMDINPAYSCLLGRPWIHALGVVP 572
Query: 170 STCHQVLCY 178
ST HQ L +
Sbjct: 573 STLHQKLKF 581
>gi|356533003|ref|XP_003535058.1| PREDICTED: uncharacterized protein LOC100797932 [Glycine max]
Length = 2105
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ N + ++LID G++VN++ + + K+ + L G
Sbjct: 934 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ-VLCYQTIY 182
S G I + V S T FLV+++ + +N++LGR+WIH + AVPST HQ ++ ++
Sbjct: 994 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKIIIWREDG 1053
Query: 183 GIEEIRGDQA 192
+ I DQ+
Sbjct: 1054 IVGNIEADQS 1063
>gi|94502647|ref|YP_588300.1| hypothetical protein ZeamMp038 [Zea mays subsp. mays]
gi|40795086|gb|AAR91130.1| hypothetical protein (mitochondrion) [Zea mays]
Length = 117
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%)
Query: 48 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDK 107
S +SF QD + IQ PHDDA+V+ +KIG VKR+L+D GSS +IL ++M LE
Sbjct: 18 SVISFSDQDSEGIQRPHDDAIVLVLKIGGNRVKRVLVDTGSSADILYKRAFDQMNLELRH 77
Query: 108 IKLFEQPLIGLSGIVTNSDGVITLLV 133
+ PL+G +G G I L V
Sbjct: 78 LGQVRTPLVGFTGDTLQPLGKIPLRV 103
>gi|147846098|emb|CAN84157.1| hypothetical protein VITISV_024468 [Vitis vinifera]
Length = 276
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 23/142 (16%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F P + + PH+D LV+++ I V++IL+ + +L A
Sbjct: 154 ITFPPINPNWVLQPHEDVLVLTLGISRFDVRKILMSAYKQMGLLSSA------------- 200
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
E P LSG N ++T V +S++ DF P+N I+GR W+H M+ +P
Sbjct: 201 -LENPRWTLSGFNGNDASLVTQNV---QFSIVEDFF------PFNAIMGRTWLHSMKLIP 250
Query: 170 STCHQVLCYQTIYGIEEIRGDQ 191
T HQ++ Y T G + G+Q
Sbjct: 251 FTYHQMVNYLTQDGHINLFGNQ 272
>gi|147834260|emb|CAN66024.1| hypothetical protein VITISV_028772 [Vitis vinifera]
Length = 294
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 5/128 (3%)
Query: 32 TFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVN 91
TFK G S +P ++ ++F P D+ + H+D L++ + + V+RIL+D GSS +
Sbjct: 171 TFKEG--SVYPVDDT---ITFPPIDVNRVLQSHEDILILMLGVSKFDVRRILVDLGSSFD 225
Query: 92 ILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATS 151
+L +T +M ++ L G +G T S G + L V A +L FLVV S
Sbjct: 226 LLQMSTYRQMGYSPSNLENLGHLLSGFNGATTTSLGDVVLPVQAGPITLSVRFLVVDDLS 285
Query: 152 PYNVILGR 159
PYN I+G
Sbjct: 286 PYNAIMGH 293
>gi|147838578|emb|CAN72118.1| hypothetical protein VITISV_012997 [Vitis vinifera]
Length = 798
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 115 LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
L+G +G+ T S G I L V +L F VV SP+NVILGR W++ M+A+PST HQ
Sbjct: 15 LLGFNGVATTSLGDIVLPV---QVTLNVQFSVVGDLSPFNVILGRAWLYYMKAIPSTYHQ 71
Query: 175 VLCYQTIYGIEEIRGDQATAWACAVLALK 203
++ + T G + G Q A C + L+
Sbjct: 72 MVSFLTKDGQTNLYGSQLAARQCYQIVLE 100
>gi|78708102|gb|ABB47077.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1663
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H +L I+ + + ++++D G++VN++ AT K+ + + L G +
Sbjct: 723 HLKSLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGGNSEDLIKTNMVLKDFGGNPS 782
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
+ GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 783 ENKGVLNVELTVDSKTVPTTFFVIDRKGSYSLLLGRDWIHANCCIPSTMHQSLIQWQGDK 842
Query: 184 IEEIRGDQATAWACAVLALKE 204
IE + D++ A A LAL E
Sbjct: 843 IEIVPADRSVNVASADLALWE 863
>gi|20043057|gb|AAM08865.1|AC113339_11 Putative retroelement [Oryza sativa Japonica Group]
Length = 1627
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H +L I+ + + ++++D G++VN++ AT K+ + + L G +
Sbjct: 723 HLKSLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGGNSEDLIKTNMVLKDFGGNPS 782
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
+ GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 783 ENKGVLNVELTVDSKTVPTTFFVIDRKGSYSLLLGRDWIHANCCIPSTMHQSLIQWQGDK 842
Query: 184 IEEIRGDQATAWACAVLALKE 204
IE + D++ A A LAL E
Sbjct: 843 IEIVPADRSVNVASADLALWE 863
>gi|224054366|ref|XP_002298224.1| predicted protein [Populus trichocarpa]
gi|222845482|gb|EEE83029.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 4/133 (3%)
Query: 48 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDK 107
+E+SF +DL L ++ I + +V RIL+D+GS+VNIL T++++ + D
Sbjct: 409 TEISFNDEDLLLGSKLYNRPFFIKGYVDQKMVNRILVDDGSAVNILPLKTMKELGIPMD- 467
Query: 108 IKLFEQPLI--GLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKM 165
+LF L+ G + N+ G I L + + F V+ A + YN++LGR W+H+
Sbjct: 468 -ELFPSHLMIQGFNQGGQNAIGKIRLAMHMEDMESNALFHVIDAKTTYNMLLGRPWMHEN 526
Query: 166 RAVPSTCHQVLCY 178
+ ST HQ Y
Sbjct: 527 GIISSTLHQCFKY 539
>gi|21672054|gb|AAM74416.1|AC120497_16 Putative retroelement [Oryza sativa Japonica Group]
Length = 1781
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H +L I+ + + ++++D G++VN++ AT K+ + + L G +
Sbjct: 716 HLKSLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGGNSEDLIKTNMVLKDFGGNPS 775
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
+ GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 776 ENKGVLNVELTVDSKTVPTTFFVIDRKGSYSLLLGRDWIHANCCIPSTMHQSLIQWQGDK 835
Query: 184 IEEIRGDQATAWACAVLALKE 204
IE + D++ A A LAL E
Sbjct: 836 IEIVPADRSVNVASADLALWE 856
>gi|147784166|emb|CAN70586.1| hypothetical protein VITISV_013306 [Vitis vinifera]
Length = 531
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 24/153 (15%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + + M +
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHM---GHSLAGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+N
Sbjct: 436 ENPGRILSGFNGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFN-------------- 481
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 482 ----HQMVSFLTNEGQTDLYGSQLAARQCYQIA 510
>gi|34015109|gb|AAQ56307.1| putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 1672
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 2/142 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H AL I+ + + ++++D G++VN++ A K+ R +D IK L G
Sbjct: 652 HLKALYINGYVNGKPMSKMMVDGGAAVNLIPYAKFRKLGRNAEDLIKT-NMVLKDFGGNP 710
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
+ + GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 711 SETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCLIQWQGD 770
Query: 183 GIEEIRGDQATAWACAVLALKE 204
+E + D++ A A LAL E
Sbjct: 771 KLEIVPADRSVNVASANLALWE 792
>gi|147821496|emb|CAN67783.1| hypothetical protein VITISV_004474 [Vitis vinifera]
Length = 531
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 24/153 (15%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + + M +
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHM---GHSLAGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
E P L G +G T S G I L V A +L F VV+ SP+N
Sbjct: 436 ENPGRILSGFNGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFN-------------- 481
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
HQ++ + T G ++ G Q A C +A
Sbjct: 482 ----HQMVSFLTNEGQTDLYGSQLAARQCYQIA 510
>gi|87241233|gb|ABD33091.1| Peptidase aspartic, active site [Medicago truncatula]
Length = 509
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F ++L + H+ AL IS+ + ++ +L+D GSS+N++ T++++ ++
Sbjct: 239 FSEEELPEVGKSHNLALHISVNCKSDMISNVLVDTGSSLNVMPKTTLDQLSYHGTPLRRS 298
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ G N G I L + + L F V+ + Y+ +LGR WIH AV ST
Sbjct: 299 TFLVKAFDGSRKNVLGEIDLPITIGPENFLVTFQVMDINASYSCLLGRPWIHDAGAVTST 358
Query: 172 CHQVLCY------QTIYGIEEIRGDQATAWAC 197
HQ L + TI+G E Q ++++C
Sbjct: 359 LHQKLKFVKNGKLVTIHGEEAYLVSQLSSFSC 390
>gi|8778245|gb|AAF79254.1|AC023279_3 F12K21.6 [Arabidopsis thaliana]
Length = 755
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 24 CDDQLA-IVTFKRGLPSNH----PFFESLSEVSFLPQDLKLIQSPHDDALVISIKIGNCL 78
C D A I ++R +N PF EV F D + PH+D LVI++ IG+
Sbjct: 296 CQDTAASIKAYQRKADANRNWARPFNGPNDEVIFHESDTNGLDRPHNDPLVITLTIGDFN 355
Query: 79 VKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKS 137
V+++L+D GS+++I+ T+ +M+++ +I +P++G SG T + G I L V AK
Sbjct: 356 VEQVLVDTGSTLDIVFLTTLREMKIDMTQIMPTPRPVLGFSGETTMTLGTIKLPVRAKG 414
>gi|20043066|gb|AAM08874.1|AC113339_20 Hypothetical protein with similarity to putative retroelements
[Oryza sativa Japonica Group]
Length = 821
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 7/166 (4%)
Query: 45 ESLSEVSFLPQDLKLIQSP------HDDALVISIKIGNCLVKRILIDNGSSVNILDDATV 98
ESL ++ P+ + +++ P H L + + + +IL+D G++VN++ AT
Sbjct: 605 ESLPKLVLSPKQV-VVEKPEGTEHWHLKPLYVKGFVNGKPMSKILVDGGAAVNLMPYATF 663
Query: 99 EKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILG 158
K+ + + L G T ++GV+ + + S ++ T F V+ Y ++ G
Sbjct: 664 RKLGKNAEYLMKTNMVLKDFGGNPTEANGVLKIKITVGSKTVPTTFFVIDGKGSYGLLHG 723
Query: 159 RQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLALKE 204
R WIH +PST HQ L IE + D++ A A L + E
Sbjct: 724 RDWIHANYCIPSTMHQSLIQWQGDQIEVVLADRSVNVANADLTIWE 769
>gi|78708107|gb|ABB47082.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 828
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 7/166 (4%)
Query: 45 ESLSEVSFLPQDLKLIQSP------HDDALVISIKIGNCLVKRILIDNGSSVNILDDATV 98
ESL ++ P+ + +++ P H L + + + +IL+D G++VN++ AT
Sbjct: 612 ESLPKLVLSPKQV-VVEKPEGTEHWHLKPLYVKGFVNGKPMSKILVDGGAAVNLMPYATF 670
Query: 99 EKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILG 158
K+ + + L G T ++GV+ + + S ++ T F V+ Y ++ G
Sbjct: 671 RKLGKNAEYLMKTNMVLKDFGGNPTEANGVLKIKITVGSKTVPTTFFVIDGKGSYGLLHG 730
Query: 159 RQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLALKE 204
R WIH +PST HQ L IE + D++ A A L + E
Sbjct: 731 RDWIHANYCIPSTMHQSLIQWQGDQIEVVLADRSVNVANADLTIWE 776
>gi|147777320|emb|CAN75943.1| hypothetical protein VITISV_016460 [Vitis vinifera]
Length = 499
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%)
Query: 127 GVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEE 186
G I L V A +L F VV+ SP+N+ILGR W+H M+A+PST HQ++ + T G +
Sbjct: 404 GDIILPVRAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPSTYHQMVSFLTNEGQTD 463
Query: 187 IRGDQATAWACAVLA 201
+ G Q A C +A
Sbjct: 464 LYGSQLAARQCYQIA 478
>gi|147766514|emb|CAN65401.1| hypothetical protein VITISV_005675 [Vitis vinifera]
Length = 463
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D H DAL++S++IG+ V+RIL+D GSS +++ + V M +
Sbjct: 355 FPPIDPTRTLQLHRDALILSLEIGDFDVQRILVDPGSSADLVQASVVSHM---GHSLAGL 411
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGR 159
E P L G +G T S G I L V A +L F VV+ SP+N+ILGR
Sbjct: 412 ENPGRILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNIILGR 462
Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + FKR + PFFESL++
Sbjct: 104 ESLREFVKRFGQAVLQVEACSMDAVLQIFKRSICPGTPFFESLAK 148
>gi|147766542|emb|CAN69696.1| hypothetical protein VITISV_012964 [Vitis vinifera]
Length = 538
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 115 LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
L G +G T S G I L V A +L F VV+ SP+NVILGR W+H M+ + ST HQ
Sbjct: 431 LSGFNGSSTTSLGDIVLPVQAGPITLNVQFSVVQDLSPFNVILGRTWLHYMKTISSTYHQ 490
Query: 175 VLCYQTIYGIEEIRGDQATAWACAVLALKET 205
++ + T G + G Q A C +A +ET
Sbjct: 491 MVSFLTKDGQVNLYGSQLAARQCYQIA-RET 520
>gi|77555405|gb|ABA98201.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2107
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Query: 60 IQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGL 118
I++ H L I+ + + ++++D G++VN++ AT K+ R +D IK L
Sbjct: 933 IENRHLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKT-NMVLKDF 991
Query: 119 SGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
G + S GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 992 GGNPSESKGVLNMELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 1049
>gi|68685649|gb|AAY99339.1| pol-polyprotein [Silene latifolia]
Length = 1307
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 90/188 (47%), Gaps = 14/188 (7%)
Query: 46 SLSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQ 105
++ +++ +D + + +PH D LV+ + I N LVKR LID G+ NI+ + L+
Sbjct: 43 TVPDITIGRKDYEGVVAPHSDPLVVHLDISNHLVKRCLIDTGAYTNIMFRECFLNLGLKI 102
Query: 106 DKIKLFEQPLIGLSGIVTNSDGVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQW 161
+ + PL SG G I L V+ + ++L++F+V+ +S YNV++GR
Sbjct: 103 EDLSPCTNPLYSFSGAGLVPLGSIRLPVMFGQTDAAKNVLSEFVVIDGSSAYNVLIGRVT 162
Query: 162 IHKMRAVPSTCHQVLCYQTIYG----------IEEIRGDQATAWACAVLALKETKRKDSN 211
+ + AV S L Y + G +E+ Q +A C + +LK K+ +
Sbjct: 163 LSEADAVMSIRALTLMYVSDQGEVQKLVSKDERDEVVNVQISARGCNMQSLKVAKKSEKG 222
Query: 212 FENQAKQD 219
+Q+
Sbjct: 223 KSPSLRQE 230
>gi|21672097|gb|AAM74459.1|AC124213_17 Putative retroelement [Oryza sativa Japonica Group]
Length = 858
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 2/142 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + +I++D G+ VN++ AT K+ R +D IK L G
Sbjct: 362 HLKPLYINGYVNGMPLSKIMVDGGAVVNLMPYATFRKLGRNSEDLIKT-NMVLKDFGGNP 420
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
+ + GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 421 SETKGVLNVELTVGSKTVPTTFFVIDRKGSYSLLLGRDWIHANCCIPSTMHQCLIQWQGD 480
Query: 183 GIEEIRGDQATAWACAVLALKE 204
I+ + D++ A A LAL E
Sbjct: 481 KIKIVPADRSVNVASADLALWE 502
>gi|32487629|emb|CAE04075.1| OSJNBb0032D24.5 [Oryza sativa Japonica Group]
Length = 1355
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 70/149 (46%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I+ + + ++++D G++VN++ AT K+ D + L G +
Sbjct: 349 HLKPLYINGYVNGKPLSKMIVDGGAAVNLMPYATFRKLGRSSDDLIKTNMVLKDFGGNQS 408
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
+ GV+ + + S ++ T F V+ Y+++LGR WIH +PST Q L
Sbjct: 409 ETKGVLNVELTVGSKTVPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMQQCLIQWQGDK 468
Query: 184 IEEIRGDQATAWACAVLALKETKRKDSNF 212
IE + D++ A A LAL E D F
Sbjct: 469 IEIVPADRSVNIASADLALWEMDGIDCLF 497
>gi|77552608|gb|ABA95405.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 431
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%)
Query: 79 VKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSY 138
+ ++L+D G++VN++ AT +K+ + + L G + + GV+ + + S
Sbjct: 129 ISKMLVDGGAAVNLMPYATFKKLGKTAEDLITTNMVLKDFGGNPSETKGVLNVELTIGSK 188
Query: 139 SLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACA 198
++ T F V+ YN++LGR WIH +PST HQ L +E + D++ A A
Sbjct: 189 TVPTTFFVIDGKGSYNLLLGRDWIHANCCIPSTMHQSLIQWQGDKVEVVPADKSVNVANA 248
Query: 199 VLALKE 204
L + E
Sbjct: 249 DLTIWE 254
>gi|449465691|ref|XP_004150561.1| PREDICTED: uncharacterized protein LOC101217069 [Cucumis sativus]
Length = 715
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H AL I +K + ++ R+L+DNGS++NI+ +T+ K+ ++ IK + G
Sbjct: 396 HIKALHIQVKYKDYVIARVLVDNGSALNIMPKSTLLKLPVDMSYIKSSTMVVRAFDGSRR 455
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
G I L + + F V++ T Y+ +LGR WIH VPST HQ L
Sbjct: 456 EVIGDIELPIKIGPCTFNIVFQVMEITPTYSFLLGRPWIHSAGVVPSTLHQKL 508
>gi|449472426|ref|XP_004153590.1| PREDICTED: uncharacterized protein LOC101218743 [Cucumis sativus]
Length = 625
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 60/115 (52%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H AL I +K + ++ R+L+DNGS++NI+ +T+ K+ ++ IK + G
Sbjct: 306 HIKALHIQVKYKDYVIARVLVDNGSALNIMPKSTLLKLPVDMSYIKSSTMVVRAFDGSRR 365
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCY 178
G I L + + F V++ T Y+ +LGR WIH VPST HQ L +
Sbjct: 366 EVIGDIELPIKIGPCTFNIVFQVMEITPTYSFLLGRPWIHSAGVVPSTLHQKLKF 420
>gi|55168117|gb|AAV43984.1| putative polyprotein [Oryza sativa Japonica Group]
gi|55168193|gb|AAV44059.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1681
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 60 IQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGL 118
+++ H L ++ + + ++++D G++VN++ AT K+ R +D IK L
Sbjct: 748 MENRHHKPLYVNGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKT-NMVLKHF 806
Query: 119 SGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCY 178
G + + GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 807 GGNPSETKGVLNVELTVGSKTIPTTFFVIDGKRSYSLLLGRDWIHTNCCIPSTMHQCLIQ 866
Query: 179 QTIYGIEEIRGD 190
+ IE + D
Sbjct: 867 WQGHKIEVVPAD 878
>gi|51038037|gb|AAT93841.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1739
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + L+ ++++D G++VN++ AT K+ R +D IK L G
Sbjct: 691 HLKPLYINGYVNGKLMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKT-NMVLKDFGGNP 749
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + GV+ + + S ++ T FLV+ Y++ LGR WIH +PST HQ L
Sbjct: 750 SETKGVLNVGLTVGSKTIPTTFLVIDGKGSYSLFLGRDWIHANCCIPSTMHQCL 803
>gi|21741600|emb|CAD39716.1| OSJNBa0052P16.15 [Oryza sativa Japonica Group]
Length = 858
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 67/141 (47%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I+ + + +++D G++VN++ AT K+ + + L G +
Sbjct: 564 HLKPLYINGFVNGKPMSNMMVDGGATVNLMPYATFRKLGRNAEDLSKTNMVLKDFGGNPS 623
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
+ GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 624 ETKGVLNVELTVGSKTIPTTFFVIDGKGCYSLLLGRDWIHANCCIPSTMHQCLIQWEGNK 683
Query: 184 IEEIRGDQATAWACAVLALKE 204
IE + D++ A LAL E
Sbjct: 684 IEIVPADRSVNVVNADLALWE 704
>gi|89179430|gb|ABD63165.1| F5M15.26, related [Asparagus officinalis]
Length = 320
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 60 IQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLS 119
++ HD L + IG+ + R+ +D GS+++I+ ++ + + ++ + + G +
Sbjct: 3 VKHEHDRPLYYTGYIGSSEISRVQVDPGSALSIMPYRVMQVLGIPMHRLHTTQTTIFGFN 62
Query: 120 GIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQ 179
T G I L ++ A + YN++LGR WIH R VPST HQV+ Y
Sbjct: 63 ANSTRPLGKIKLRCQIGDLKSEVACYIIDADTSYNLLLGRPWIHANRIVPSTLHQVMKYA 122
Query: 180 TIYGIEEIRGDQATAWACAVLALKETKRKDSNF--------ENQAKQDV 220
G E+R ++A K R NF E+Q K+DV
Sbjct: 123 NDEG--EVR---------TLIAEKYPFRGVENFHTDSVFYSESQEKEDV 160
>gi|20043007|gb|AAM08815.1|AC090486_25 Hypothetical protein [Oryza sativa Japonica Group]
Length = 983
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 6/157 (3%)
Query: 47 LSEVSFLPQDLKLIQSP-----HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM 101
+++ S P+D + + P H L + I V R+L+D G++VN++ + +KM
Sbjct: 775 VAQFSLGPKDA-VFEKPDESNRHMKPLYLKGHIDGKPVSRMLVDGGAAVNLMLYSLFKKM 833
Query: 102 RLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQW 161
D++K L G + T + G+ ++ + + +L T F +V YNVILGR W
Sbjct: 834 GRGVDELKKTNMILNGFNDEPTEAKGIFSVELTVGNKTLPTAFFIVDVQGNYNVILGRCW 893
Query: 162 IHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACA 198
IH PST +Q L +E ++ D + A A
Sbjct: 894 IHANCCAPSTLYQCLIQWDGDDVEIVQADTSADVAMA 930
>gi|147807927|emb|CAN62152.1| hypothetical protein VITISV_032404 [Vitis vinifera]
Length = 660
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%)
Query: 115 LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
L G +G T S G + L + A L F VV+ SP+N ILGR W+H M+ +PST HQ
Sbjct: 554 LSGFNGASTTSLGDVILPIQAGPVILNVLFSVVEDLSPFNAILGRTWLHSMKVIPSTYHQ 613
Query: 175 VLCYQTIYGIEEIRGDQATAWACAVLA 201
++ + T G ++ G Q A C +A
Sbjct: 614 MVSFITHDGQVDLYGSQLVARQCYQIA 640
>gi|108709239|gb|ABF97034.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1908
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 4/157 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D K + PH D LVIS +I V+RIL+D GSS +++ KM L +
Sbjct: 672 ISFGPEDTKGVLFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALT 731
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
L L G G G LL+ S ++ F VV YN I GR ++K
Sbjct: 732 LAPASLRGFGGEAVQVLGQALLLIAFGSGENRSEEQILFDVVNIPYNYNAIFGRATLNKF 791
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
+ + L G+ ++G Q +A + LA+
Sbjct: 792 EDISHHNYLKLKMPGPTGVIVVKGLQPSAASKCDLAI 828
>gi|31126674|gb|AAP44597.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1862
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 4/157 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D K + PH D LVIS +I V+RIL+D GSS +++ KM L +
Sbjct: 672 ISFGPEDTKGVLFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALT 731
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
L L G G G LL+ S ++ F VV YN I GR ++K
Sbjct: 732 LAPASLRGFGGEAVQVLGQALLLIAFGSGENRSEEQILFDVVNIPYNYNAIFGRATLNKF 791
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
+ + L G+ ++G Q +A + LA+
Sbjct: 792 EDISHHNYLKLKMPGPTGVIVVKGLQPSAASKCDLAI 828
>gi|20177627|gb|AAM14682.1|AC097446_11 Putative retrotransposon polyprotein [Oryza sativa Japonica Group]
gi|22725922|gb|AAN04932.1| Putative retrotransposon polyprotein [Oryza sativa Japonica Group]
gi|31430226|gb|AAP52172.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1094
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 48 SEVSFLPQDLKLIQSP------HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM 101
+ +S+L + + + P H L I+ + + ++++D G++VN++ AT +K+
Sbjct: 442 NRLSWLSPEQAVFEKPEGTENRHLKPLYINGYVNGKPMPKMMVDGGAAVNLMPYATFKKL 501
Query: 102 RLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQW 161
+ + L G + + GV+ + + S ++ T F V+ Y+++LGR W
Sbjct: 502 GRNAENLIKTNMVLKDFGGNPSETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDW 561
Query: 162 IHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLALKETKR 207
IH +PST HQ L IE + D+ W + L+ + R
Sbjct: 562 IHANCCIPSTMHQCLIQWQGNKIEIVPADR---WRTQAIILRASWR 604
>gi|20177620|gb|AAM14675.1|AC097446_4 Putative retrotransposon polyprotein [Oryza sativa Japonica Group]
gi|22725915|gb|AAN04925.1| Putative retrotransposon polyprotein [Oryza sativa Japonica Group]
gi|31430219|gb|AAP52165.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1094
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 48 SEVSFLPQDLKLIQSP------HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM 101
+ +S+L + + + P H L I+ + + ++++D G++VN++ AT +K+
Sbjct: 442 NRLSWLSPEQAVFEKPEGTENRHLKPLYINGYVNGKPMPKMMVDGGAAVNLMPYATFKKL 501
Query: 102 RLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQW 161
+ + L G + + GV+ + + S ++ T F V+ Y+++LGR W
Sbjct: 502 GRNAENLIKTNMVLKDFGGNPSETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDW 561
Query: 162 IHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLALKETKR 207
IH +PST HQ L IE + D+ W + L+ + R
Sbjct: 562 IHANCCIPSTMHQCLIQWQGNKIEIVPADR---WRTQAIILRASWR 604
>gi|32489861|emb|CAE04028.1| OSJNBb0068N06.4 [Oryza sativa Japonica Group]
Length = 959
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
Query: 79 VKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKS 137
+ ++++D G+ VN++ AT K+ R +D IK L G + + GV+ + + S
Sbjct: 539 MSKMMVDGGAVVNLMPYATFRKLGRNAEDLIKT-NMVLKDFGGNPSETKGVLNVELTVGS 597
Query: 138 YSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
++ T F V+ Y+++LGR WIH +PST +Q L + IE + D++ A
Sbjct: 598 KTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMNQCLIQWQVDKIEIVPADRSVNVAS 657
Query: 198 AVLALKE 204
A LAL E
Sbjct: 658 ADLALWE 664
>gi|357488751|ref|XP_003614663.1| F-box/kelch-repeat protein [Medicago truncatula]
gi|355515998|gb|AES97621.1| F-box/kelch-repeat protein [Medicago truncatula]
Length = 1043
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H+ AL IS+ + ++ +L+D GSS+N++ +T++++ ++ + G
Sbjct: 788 HNLALHISVNCKSDMISNVLVDTGSSLNVMPKSTLDQLSYRGTPLRRSTFLVKAFDGTRK 847
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQ---- 179
+ G I L + + L F V+ + Y+ +LGR WIH AV ST HQ L +
Sbjct: 848 SVLGEIDLPITIGPETFLITFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLKFAKSGK 907
Query: 180 --TIYGIEEIRGDQATAWAC 197
TI+G E Q ++++C
Sbjct: 908 LVTIHGEEAYLVSQLSSFSC 927
>gi|62701723|gb|AAX92796.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|77550552|gb|ABA93349.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1163
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L ++ + + ++++D G++VN++ AT K+ R +D IK L G
Sbjct: 862 HLKPLYVNGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKT-NMALKDFGGNP 920
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
+ + GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 921 SETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHTNCCIPSTMHQCLIQWQGD 980
Query: 183 GIEEIRGDQATAWACAVLALKE 204
IE + D + A A L L E
Sbjct: 981 KIEIVPVDMSVNVASADLGLWE 1002
>gi|358343399|ref|XP_003635790.1| Receptor-like kinase [Medicago truncatula]
gi|355501725|gb|AES82928.1| Receptor-like kinase [Medicago truncatula]
Length = 2313
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F +L + H+ AL IS+ + ++ +L+D GSS+N++ +T++++ + ++
Sbjct: 2043 FGEDELPEVGKCHNLALHISVNCKSDMLSNVLVDTGSSLNVMPKSTLDQLSYREIPLRRS 2102
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ G N G I L + + L F V+ + Y+ +LGR WIH AV ST
Sbjct: 2103 TFLVKAFDGSRKNVLGEIDLPITVGPENFLVTFQVMDINASYSCLLGRPWIHDAGAVTST 2162
Query: 172 CHQVLCY------QTIYGIEEIRGDQATAWAC 197
HQ L + T++G E Q ++++C
Sbjct: 2163 LHQKLKFVKNGKLVTVHGEEAYLVSQLSSFSC 2194
>gi|147779777|emb|CAN72424.1| hypothetical protein VITISV_011054 [Vitis vinifera]
Length = 295
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 74/142 (52%), Gaps = 3/142 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F +DL L PH+ L ++ I + RILID GS++NI+ T++++ + K+
Sbjct: 113 ITFNYKDLHLGSKPHNQPLFVTGYIQEQNITRILIDGGSALNIMPKTTMKRLGIAMKKLT 172
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ G + + +I L ++ S T F V+ A YNV++ + W+H+ +P
Sbjct: 173 RSRLMIQGFNQRGQRAISMIHLELVMGELSSNTLFHVIDAKPSYNVLIXQPWLHENAVIP 232
Query: 170 STCHQVLCYQTIY-GIEEIRGD 190
ST +Q C++ G+ ++ D
Sbjct: 233 STLYQ--CFKFYRGGVNKVEAD 252
>gi|147771677|emb|CAN69287.1| hypothetical protein VITISV_035200 [Vitis vinifera]
Length = 439
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 58/98 (59%)
Query: 61 QSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSG 120
++PH AL++S++IG+ V+RIL+D GSS +++ + V M ++ + L G +G
Sbjct: 297 KAPHRHALILSLEIGDFDVRRILVDPGSSADLVQASVVSHMGHNLTGLENPGRILSGFNG 356
Query: 121 IVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILG 158
T S G I L V A +L F +V+ SP+NVILG
Sbjct: 357 SSTTSLGDIVLSVQAGPVTLNVQFSMVQDLSPFNVILG 394
>gi|77552305|gb|ABA95102.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2096
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
Query: 81 RILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYS 139
++L+D G++VN++ T K+ ++ +D IK L G + + GV+ + + S +
Sbjct: 870 KMLVDGGAAVNLMPYTTFRKLGKVPEDLIKT-NMVLKDFGGNASEAKGVLNVELTVGSKT 928
Query: 140 LLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAV 199
+ T F V Y+++LGR WIH VPST HQ L +E ++ D++ A A
Sbjct: 929 IPTTFFVFDGKGSYSLLLGRDWIHANCCVPSTMHQCLMQWQGDQVEIVQADRSVHVANAD 988
Query: 200 LALKE 204
LA+ E
Sbjct: 989 LAVWE 993
>gi|50540675|gb|AAT77832.1| putative gag-pol precursor [Oryza sativa Japonica Group]
gi|108709121|gb|ABF96916.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1631
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + PH D LVIS +I V+RIL+D GSS +++ KM L +
Sbjct: 534 ISFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALT 593
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
L G G G LL+ S + F VV YN I GR ++K
Sbjct: 594 PAPASLRGFGGEAVRVLGQALLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKF 653
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
A+ + L G+ ++G Q++A + + LA+
Sbjct: 654 EAISHHNYLKLKMPGPAGVIVVKGLQSSAASKSDLAI 690
>gi|31432029|gb|AAP53721.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1260
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 4/158 (2%)
Query: 49 EVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
++SF P+D + + PH D LVIS +I V+RIL+D GSS +++ KM L +
Sbjct: 387 QISFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTLAL 446
Query: 109 KLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHK 164
L G G G LLV + + F VV YN I GR ++K
Sbjct: 447 TPAPASLRGFGGKAVQVLGQAQLLVAFGTGENRREEQVLFDVVDIPYNYNAIFGRATLNK 506
Query: 165 MRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
A+ + L + G+ ++G Q +A + LA+
Sbjct: 507 FEAISHHNYLKLKMPSPTGVIVVKGLQPSAASKGDLAI 544
>gi|116309017|emb|CAH66133.1| H0622G10.2 [Oryza sativa Indica Group]
Length = 1224
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%)
Query: 55 QDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQP 114
+ L+ ++ H L I+ + + +++ D G++VN++ AT K+ + I
Sbjct: 144 EKLEGTENQHLKPLYINGYVNGKPMSKMMFDGGAAVNLMPYATFRKLGRNAEDIIKTNMV 203
Query: 115 LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
L G + + GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ
Sbjct: 204 LKDFGGNSSETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANGCIPSTMHQ 263
Query: 175 VL 176
L
Sbjct: 264 CL 265
>gi|147816367|emb|CAN70767.1| hypothetical protein VITISV_017696 [Vitis vinifera]
Length = 1801
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL L S H L I + V +L+DNGS++N+ T +R D +
Sbjct: 563 IVFSDDDLPLEGSNHVRPLFIDVACLGHRVPSVLLDNGSALNVCPLVTTIALRFSPDDFR 622
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G G ++ V+ S F V++ S +N++LGR WIH+ A+P
Sbjct: 623 PSTQTVRAYDGTQRTVMGTLSTHVMIGPVSYSIVFQVLRIQSSFNLLLGRPWIHEAGAIP 682
Query: 170 STCHQ 174
S+ HQ
Sbjct: 683 SSLHQ 687
>gi|440577271|emb|CCI55279.1| PH01B001G05.2 [Phyllostachys edulis]
Length = 2097
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 46 SLSEVSFLPQDLKLIQS-PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLE 104
S + +SF D + + P +V+ I NC V R+L+D GSS+NIL +E+M++
Sbjct: 887 SDTAISFSKDDCPIPSTRPGRFPIVVEPTINNCQVNRVLVDGGSSLNILFVRALEEMQIP 946
Query: 105 QDKIKLFEQPLIGL-SGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGR 159
K+K + + G G ++L V K + T+ F VV S YN ILGR
Sbjct: 947 MSKVKPVKYAFHSIVPGSTAKPIGQVSLPVTFGKPDNFRTERIPFDVVNFESAYNGILGR 1006
Query: 160 QWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
+ K +Q L G+ IRGDQ A+ C
Sbjct: 1007 PALAKFLIATHYGYQSLKMPGPKGVITIRGDQKMAYVC 1044
>gi|38343986|emb|CAD40452.2| OSJNBa0041M21.10 [Oryza sativa Japonica Group]
gi|38343994|emb|CAD40359.2| OSJNBa0093P23.5 [Oryza sativa Japonica Group]
Length = 2074
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + PH D LVIS +I V+RIL+D GSS +++ KM L +
Sbjct: 1450 ISFGPEDAEGVLFPHQDPLVISAEIAGFEVRRILVDGGSSADVIYAEAYAKMGLPTQALT 1509
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
L G SG G LL+ S + F VV YN I GR ++K+
Sbjct: 1510 PALTSLRGFSGEAVQVLGQALLLIAFGSGENRREEQILFDVVNIPYNYNAIFGRATLNKL 1569
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
A+ + L G+ ++G Q +A + LA+
Sbjct: 1570 EAISHHNYLKLKMPGPTGVIVVKGLQPSAASKCDLAI 1606
>gi|18254415|gb|AAL66756.1|AF464738_7 putative prpol [Zea mays]
Length = 969
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F +DL+L PH+DA+VIS I LV +L+D GS+ +I+ +M+ +DKI
Sbjct: 254 ITFSQEDLQLKDYPHNDAMVISCIIKGFLVHNVLVDTGSAADIIVAKAFRQMQEPEDKIH 313
Query: 110 LFEQPLIGLSG-IVTNSDGV---ITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKM 165
PL G G + D + +T + + + F +V PYN I+G ++
Sbjct: 314 DSTHPLCGFGGRQIVALDKIMMPVTFGFVNNTRTEQVVFDIVDMEYPYNAIIGHGTLNAF 373
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATA 194
A+ + + + G I G Q A
Sbjct: 374 EAILHPAYLYMKIPSDQGPIAIHGSQEAA 402
>gi|22711559|gb|AAM01165.2|AC113336_17 Hypothetical protein similar to putative retroelement [Oryza sativa
Japonica Group]
Length = 1001
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 8/158 (5%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V R+LID GSS+N+L +T++ M + Q ++ +QP G++ +++
Sbjct: 807 IVVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPQSELTPTDQPFYGITPQLSSRPL 866
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V ++ + T+ F V + + YN I+GR + K A +QVL
Sbjct: 867 GNITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTELTKFMAASHYAYQVLKMPGPK 926
Query: 183 GIEEIRGDQATAWACAVLAL---KETKRKDSNFENQAK 217
GI I+G+ A C +L ++T + FE K
Sbjct: 927 GIITIQGNAKLAVQCDKRSLDMVEQTPTPPATFEPPKK 964
>gi|110288686|gb|AAP52380.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 987
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 8/158 (5%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V R+LID GSS+N+L +T++ M + Q ++ +QP G++ +++
Sbjct: 793 IVVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPQSELTPTDQPFYGITPQLSSRPL 852
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V ++ + T+ F V + + YN I+GR + K A +QVL
Sbjct: 853 GNITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTELTKFMAASHYAYQVLKMPGPK 912
Query: 183 GIEEIRGDQATAWACAVLAL---KETKRKDSNFENQAK 217
GI I+G+ A C +L ++T + FE K
Sbjct: 913 GIITIQGNAKLAVQCDKRSLDMVEQTPTPPATFEPPKK 950
>gi|77555082|gb|ABA97878.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 493
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I+ + + ++++D G++VN++ AT K+ D + L +
Sbjct: 280 HLKPLYINGYVNGKPMSKMMVDGGATVNLMPYATFRKLGRNSDDLIKTNMVLKEFVDNPS 339
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
+ GV+ + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 340 ETRGVLNAELTVSSKTVPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCLIQWQGDK 399
Query: 184 IEEIRGDQATAWACAVLAL 202
IE + D++ A A LAL
Sbjct: 400 IEIVPADRSVNVASADLAL 418
>gi|147809940|emb|CAN67100.1| hypothetical protein VITISV_016811 [Vitis vinifera]
Length = 506
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 46/83 (55%)
Query: 115 LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
L G +G T S G I L V A +L F VV+ P+NVILGR W+H M+ +PST HQ
Sbjct: 420 LSGFNGASTTSLGDIVLPVQAGPVTLNVQFSVVQDLLPFNVILGRTWLHYMKVIPSTYHQ 479
Query: 175 VLCYQTIYGIEEIRGDQATAWAC 197
++ + T G ++ Q A C
Sbjct: 480 MVSFLTKDGQIDLYDSQLAARQC 502
>gi|108862615|gb|ABA97725.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 842
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIVTNSD 126
L I+ + + ++++D G+ VN++ AT+ K+ R +D IK L G + +
Sbjct: 236 LYINGYVNGKPMSKMMVDGGAVVNLMPYATLRKLGRNAEDLIKT-NMVLKDFGGNPSETK 294
Query: 127 GVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEE 186
GV+ + + + ++ T F V+ Y+++LGR WIH PST HQ L IE
Sbjct: 295 GVLNVELTVGNKTIPTTFFVIDGKGSYSLLLGRDWIHANCCFPSTMHQCLIQWQGDKIEI 354
Query: 187 IRGDQATAWACAVLALKE 204
+ D++ A A LAL E
Sbjct: 355 VPADRSVNVASADLALWE 372
>gi|31430656|gb|AAP52537.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|62733437|gb|AAX95554.1| Reverse transcriptase (RNA-dependent DNA polymerase), putative
[Oryza sativa Japonica Group]
gi|62733455|gb|AAX95572.1| Reverse transcriptase (RNA-dependent DNA polymerase), putative
[Oryza sativa Japonica Group]
Length = 1383
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 66/123 (53%), Gaps = 2/123 (1%)
Query: 55 QDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQ 113
++L+ ++ H L I+ + + ++++D G++VN++ AT K+ R +D IK
Sbjct: 637 ENLEGTENRHLKPLYINGYVNGKPMSKMIVDGGAAVNLMPYATFRKLGRNAEDLIKT-NM 695
Query: 114 PLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCH 173
L G + + GV+ + + S ++ T F V+ Y+++LGR WIH +PST H
Sbjct: 696 VLKDFGGNPSETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMH 755
Query: 174 QVL 176
Q L
Sbjct: 756 QCL 758
>gi|38347565|emb|CAE04998.2| OSJNBb0093G06.6 [Oryza sativa Japonica Group]
Length = 1165
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Query: 60 IQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGL 118
I++ H L ++ + + +++++ G++VN++ AT K+ R +D IK L
Sbjct: 272 IENRHVKPLYVNGYVNGKPMSKMMVNGGAAVNLMPYATFRKLGRNAEDLIKT-NMVLKNF 330
Query: 119 SGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
G + + GV+ + + A S ++ T F V+ YN++LG WIH +PST HQ L
Sbjct: 331 GGNPSETKGVLNVELTAGSKTIPTTFFVIDGKGSYNLLLGSDWIHANCCIPSTMHQCL 388
>gi|21671903|gb|AAM74265.1|AC083943_5 Putative retroelement [Oryza sativa Japonica Group]
gi|31431952|gb|AAP53658.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1170
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I+ + + ++++D G++VN++ AT K+ + + L G +
Sbjct: 446 HLKPLYINGYVNGKTMSKMMVDGGAAVNLMPYATFRKLGRNTEALIKTNMVLKDFGGNPS 505
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 506 ETRGVLNVELTVGSKTIPTTFFVINGNGSYSLLLGRDWIHANCCIPSTMHQCL 558
>gi|108862531|gb|ABA97828.2| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1644
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Query: 61 QSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLS 119
Q+ H L I+ + L+ ++++D G++VN++ AT K+ R D IK L
Sbjct: 761 QNRHLKPLYINGFVNGKLMSKMIVDGGAAVNLMPYATFRKLGRNPHDLIKT-NMVLKDFG 819
Query: 120 GIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
G + + GV+ + + S ++ T F V+ Y+++LGR WIH +PST H+ L
Sbjct: 820 GNPSETKGVLNVELTVGSKTVPTTFFVIDGKGSYSLLLGRDWIHATCCIPSTMHRCL 876
>gi|147836258|emb|CAN71008.1| hypothetical protein VITISV_025165 [Vitis vinifera]
Length = 269
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 21/152 (13%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F DL L+ PH+DAL++++ I V+RIL++ GSS N+L + ++M ++
Sbjct: 139 ITFPSVDLNLVLQPHEDALILTLGINEYDVRRILVNLGSSANLLQVSAFKQMGFPPFALE 198
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
E+ L G +G T S G I L V A+ L FL++
Sbjct: 199 NPERILSGFNGASTTSLGNIVLFVQARPVVLNVQFLIIS--------------------- 237
Query: 170 STCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
ST HQ++ Y T + G Q A C +A
Sbjct: 238 STYHQMISYLTEDEQINLYGSQLVACQCYQVA 269
>gi|77553999|gb|ABA96795.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1371
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L + I + R+L+D G++VN++ + +K+ +++K +G T
Sbjct: 841 HMKPLYLKGHIDGKPITRMLVDGGAAVNLMPYSLFKKLGRGDNELKKTNMIFNDFNGEPT 900
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + ++ + ++ +L T F +V YNVILGR WIH VPST HQ L
Sbjct: 901 EAKDIFSVELTVENKTLPTAFFIVDVQDNYNVILGRCWIHANCCVPSTLHQYL 953
>gi|62732692|gb|AAX94811.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 881
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
Query: 60 IQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGL 118
I++ H L I+ + + ++++D G++VN++ AT K R +D IK L
Sbjct: 703 IENRHLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKFGRNAEDLIKT-NMVLKDF 761
Query: 119 SGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
G + + GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 762 GGNRSETKGVLNVELTVSSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 819
>gi|116309170|emb|CAH66268.1| OSIGBa0136B09.4 [Oryza sativa Indica Group]
Length = 1348
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + PH D LVIS +I V+RIL+D GSS +++ KM L +
Sbjct: 724 ISFGPEDAEGVLFPHQDPLVISAEIAGFEVRRILVDGGSSADVIYAEAYAKMGLPTQALT 783
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
L G SG G LL+ S + F VV YN I GR ++K+
Sbjct: 784 PALTSLRGFSGEAVQVLGQALLLIAFGSGENRREEQILFDVVNIPYNYNAIFGRATLNKL 843
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
A+ + L G+ ++G Q +A + LA+
Sbjct: 844 EAISHHNYLKLKMPGPTGVIVVKGLQPSAASKCDLAI 880
>gi|38567649|emb|CAE75887.1| B1234D02.11 [Oryza sativa Japonica Group]
gi|38605876|emb|CAD40002.3| OSJNBb0052B05.5 [Oryza sativa Japonica Group]
Length = 1823
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 70/145 (48%)
Query: 60 IQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLS 119
I++ H L I+ + + ++++D G++VN++ AT K+ + + L
Sbjct: 779 IENQHLKPLYINGYVNRKPMSKMMVDGGAAVNLMPYATFRKLGKNAEDLIKKNMVLKDFG 838
Query: 120 GIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQ 179
G + + GV+ + + S ++ T F ++ Y+++LGR WIH +PST HQ L
Sbjct: 839 GNPSETKGVLNVELTVGSKTVPTTFFIIDGKGSYSLLLGRDWIHANCCIPSTMHQCLFQW 898
Query: 180 TIYGIEEIRGDQATAWACAVLALKE 204
IE + ++ A A LA E
Sbjct: 899 QGDKIEIVPAYRSVNVASADLAFWE 923
>gi|77555500|gb|ABA98296.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1312
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D G++VN++ AT K+ R +D IK L G
Sbjct: 795 HLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKT-NMVLKDFGGNP 853
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 854 SETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHASCCIPSTMHQCL 907
>gi|50540732|gb|AAT77888.1| putative retrotransposon gag protein [Oryza sativa Japonica Group]
gi|108710900|gb|ABF98695.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1251
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D G++VN++ AT +K+ R +D IK L G
Sbjct: 697 HLKPLYINGYVNGKSMSKMMVDGGAAVNLMPYATFKKLGRNAEDLIKT-NMVLKDFGGNP 755
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 756 SETRGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 809
>gi|410810514|emb|CCI61379.1| hypothetical protein (K45 marker), partial [Lens orientalis]
Length = 188
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 79 VKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSY 138
V ++ +D G+ VN++ + K ++ ++ L G+ + GVI + + +
Sbjct: 5 VNKVFVDGGAVVNLMPLTLLRKQGKSEEDLRPHNMVLSNYEGMTISILGVIQVELAVGTT 64
Query: 139 SLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGI-EEIRGDQA 192
S T F+V+K +N++LGR+WIH + AVPST HQ L GI + I DQ+
Sbjct: 65 SRHTLFMVIKYIENFNLLLGREWIHGIGAVPSTLHQRLIIWRKDGIVDNIEADQS 119
>gi|147801251|emb|CAN77115.1| hypothetical protein VITISV_016045 [Vitis vinifera]
Length = 480
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D I PH D L++S++IG+ V+RIL+D GSS +++ + V M ++
Sbjct: 337 FPPVDPTRILXPHCDXLIMSLEIGDFDVRRILVDXGSSADLVQASVVSHMGYNLTGLENP 396
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYN 154
+ L G +G T S G I L V A +L F VV+ SP+N
Sbjct: 397 RRILSGFNGSSTTSLGDIILPVQAHPVTLNVQFSVVQDLSPFN 439
>gi|77555936|gb|ABA98732.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1575
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Query: 60 IQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGL 118
I++ H L I+ + + ++++D G++VN++ AT ++ R +D IK L
Sbjct: 957 IENRHLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRELGRNAEDLIKT-NMVLKDF 1015
Query: 119 SGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
G + + GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 1016 GGNPSETKGVLNVELTVDSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 1073
>gi|110288898|gb|ABB47187.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 989
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D G++VN++ AT K+ R +D IK L G
Sbjct: 117 HLKPLYINGYVNGKPLSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKT-NMVLKDFGGNP 175
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 176 SETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 229
>gi|38347305|emb|CAE02300.2| OSJNBa0042F21.7 [Oryza sativa Japonica Group]
Length = 1711
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I+ + + +I+++ G++VN++ DAT K+ D + L G +
Sbjct: 921 HLKPLYINGYVNGKPMSKIMVEGGAAVNLMPDATFRKLGRNSDDLIKTNMVLKDFGGNPS 980
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ GV+ + + S + F V+ Y+++LGR WIH +PST HQ L
Sbjct: 981 ETKGVLNVELTVGSMIVPAIFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 1033
>gi|147778604|emb|CAN67043.1| hypothetical protein VITISV_037622 [Vitis vinifera]
Length = 90
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%)
Query: 115 LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
L G G+ T S G I L V +L F VV+ SP+N ILGR W+H M+A+PST HQ
Sbjct: 15 LSGFKGMATTSLGDIVLPVQEGPVTLNVQFSVVQDLSPFNAILGRTWLHYMKAIPSTYHQ 74
Query: 175 VLCYQTIYGIEEIRG 189
++ + T G ++ G
Sbjct: 75 MVSFLTENGQIDLYG 89
>gi|32480326|emb|CAE02458.1| OSJNBa0042D13.11 [Oryza sativa Japonica Group]
Length = 992
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 4/157 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + PH D LVIS +I V+RIL+D GSS +++ KM L +
Sbjct: 135 ISFGPEDAEEVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALT 194
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
L G G G LL+ S + F +V YN I GR ++K
Sbjct: 195 PAPASLRGFGGEAVQVLGQAFLLIAFGSGENKREEQILFDIVDIPYHYNAIFGRATLNKF 254
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
A+ + L G+ ++G Q +A + LA+
Sbjct: 255 EAISHHNYLKLKMLGPTGVIVVKGLQPSAASKGDLAI 291
>gi|14091845|gb|AAK53848.1|AC016781_2 Putative retroelement [Oryza sativa Japonica Group]
Length = 2014
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D G+ VN++ AT K+ R +D IK LI G +
Sbjct: 913 HLKPLYINGYVNGKPMSKMMVDGGAEVNLMPYATFRKLGRNVEDLIKT-NMVLIDFGGNL 971
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + GV + + + ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 972 SETKGVSNVELTVGNKTIPTTFFVIDGNGSYSLLLGRDWIHANCCIPSTMHQCL 1025
>gi|41393197|gb|AAS01920.1| putative reverse transcriptase [Oryza sativa Japonica Group]
gi|108709162|gb|ABF96957.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1149
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Query: 61 QSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLS 119
++ H L I+ + + ++++D G++VN++ AT K+ R +D IK L
Sbjct: 656 ENRHLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKT-NMVLEDFG 714
Query: 120 GIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
G + + GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 715 GNPSETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 771
>gi|147856035|emb|CAN78618.1| hypothetical protein VITISV_003661 [Vitis vinifera]
Length = 506
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P DL PH DAL++S++IG+ V+RIL+D SS +++ + V M ++
Sbjct: 363 FPPVDLTRTLQPHRDALILSLEIGDFDVRRILVDPSSSTDLVQASVVSHMGHSLTGLENP 422
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYN 154
+ L G +G T S G I L V A +L F VV+ SP+N
Sbjct: 423 GRILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQDLSPFN 465
>gi|61656643|emb|CAE75952.2| B1159F04.15 [Oryza sativa Japonica Group]
Length = 1823
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ I + ++++D G++VN++ AT K+ R +D IK L G
Sbjct: 883 HLKPLYINSYINGKPMSKMMVDGGAAVNLMPCATFRKLGRNSEDLIKT-NMVLKDFGGNP 941
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + GV+ + + S ++ T F V+ Y++ LGR WIH +PST HQ L
Sbjct: 942 SETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLFLGRDWIHANCFIPSTMHQCL 995
>gi|62734315|gb|AAX96424.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
Length = 1587
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + H D LVIS +I V+RIL+D GSS +++ KM L +
Sbjct: 583 ISFGPEDAEGVMFSHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMELPTQTLT 642
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
L G G G LL+ S + F VV YN I GR ++K
Sbjct: 643 PAPASLRGFGGEAVQVLGQALLLIAFGSGENGREEQILFDVVDIPYNYNAIFGRATLNKF 702
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
AV + L + G+ ++G Q++A + + LA+
Sbjct: 703 EAVSHHNYLKLKMPSPAGVIVVKGLQSSAASKSDLAI 739
>gi|62733490|gb|AAX95607.1| RNase H, putative [Oryza sativa Japonica Group]
gi|108709336|gb|ABF97131.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2282
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D G+ VN++ AT K+ R +D IK LI G +
Sbjct: 1166 HLKPLYINGYVNGKPMSKMMVDGGAEVNLMPYATFRKLGRNVEDLIKT-NMVLIDFGGNL 1224
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + GV + + + ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 1225 SETKGVSNVELTVGNKTIPTTFFVIDGNGSYSLLLGRDWIHANCCIPSTMHQCL 1278
>gi|38605822|emb|CAE05231.3| OSJNBa0011K22.13 [Oryza sativa Japonica Group]
Length = 1755
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ I + ++++D G++VN++ AT K+ R +D IK L G
Sbjct: 883 HLKPLYINSYINGKPMSKMMVDGGAAVNLMPCATFRKLGRNSEDLIKT-NMVLKDFGGNP 941
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + GV+ + + S ++ T F V+ Y++ LGR WIH +PST HQ L
Sbjct: 942 SETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLFLGRDWIHANCFIPSTMHQCL 995
>gi|77551749|gb|ABA94546.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1665
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L ++ + + ++++D G++VN++ AT K+ R +D IK L G
Sbjct: 756 HIKPLYVNGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKT-NMVLKDFGGNP 814
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 815 SETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRYWIHANCCIPSTMHQCL 868
>gi|13992677|gb|AAK51571.1|AC022352_7 Putative retroelement [Oryza sativa Japonica Group]
Length = 1497
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 69/157 (43%), Gaps = 4/157 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + PH D LVIS +I V+RIL+D GSS +I+ KM L +
Sbjct: 425 ISFGPEDAEGVLFPHQDPLVISAEIAGFEVRRILVDEGSSADIIFAEAYAKMGLPTQALT 484
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
L G G G LL+ S + F VV YN I GR ++K
Sbjct: 485 PAPASLRGFGGEPVQVLGQALLLIAFGSGDNRREEQILFDVVDIPYNYNAIFGRATLNKF 544
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
A+ + L G+ ++G Q +A LA+
Sbjct: 545 EAISHHNYLKLKMPGPTGVIVVKGLQPSASPKGDLAI 581
>gi|108864276|gb|ABA92927.2| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
[Oryza sativa Japonica Group]
Length = 1590
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + H D LVIS +I V+RIL+D GSS +++ KM L +
Sbjct: 583 ISFGPEDAEGVMFSHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMELPTQTLT 642
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
L G G G LL+ S + F VV YN I GR ++K
Sbjct: 643 PAPASLRGFGGEAVQVLGQALLLIAFGSGENGREEQILFDVVDIPYNYNAIFGRATLNKF 702
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
AV + L + G+ ++G Q++A + + LA+
Sbjct: 703 EAVSHHNYLKLKMPSPAGVIVVKGLQSSAASKSDLAI 739
>gi|77550214|gb|ABA93011.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1254
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 45 ESLSEVSFLPQDLKLIQSP------HDDALVISIKIGNCLVKRILIDNGSSVNILDDATV 98
E S FL + + + P H L I+ + + ++++D G++VN++ AT
Sbjct: 388 EEESAKLFLSPEQAVFEKPEGTENRHLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYATF 447
Query: 99 EKM-RLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVIL 157
K+ R +D IK L SG ++ GV+ + + + ++ T F V+ Y+ +L
Sbjct: 448 RKLGRNTEDLIKT-NMVLKDFSGNPSDIKGVLNVELTLGNKTIPTSFFVIDGKGSYSFLL 506
Query: 158 GRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQA 192
GR WIH +PST HQ L IE + D++
Sbjct: 507 GRDWIHANCCIPSTMHQCLIQWQADKIEIVPADRS 541
>gi|147787395|emb|CAN62340.1| hypothetical protein VITISV_035644 [Vitis vinifera]
Length = 507
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 139 SLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACA 198
+L F VV+ SP+NVILGR W+H M+A+PST HQ++ + T G ++ G Q A C
Sbjct: 424 TLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQMVSFLTDEGQTDLYGSQLAARQCY 483
Query: 199 VLA 201
+A
Sbjct: 484 QIA 486
>gi|38345984|emb|CAE01996.2| OSJNBb0033G08.12 [Oryza sativa Japonica Group]
Length = 1847
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 10/205 (4%)
Query: 3 RVETLKYYIRRFRLASAKVENCD-DQLAIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQ 61
R + K+ ++FR ++ N I + +G P + L +SF P+D + +
Sbjct: 723 REQLSKHPAKQFRSKHPQLNNAKMYSEGITSAGKGAPQ---YLNQL--ISFGPEDAEEVM 777
Query: 62 SPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGI 121
PH D LVIS +I V+RIL+D GSS +++ K+ L + L G G
Sbjct: 778 FPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKIGLPTQALTPAPASLRGFGGE 837
Query: 122 VTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLC 177
G LL+ S + F VV YN I GR ++K A+ + L
Sbjct: 838 AVQVLGQALLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKFEAIFHHNYLKLK 897
Query: 178 YQTIYGIEEIRGDQATAWACAVLAL 202
G+ ++G Q +A + LA+
Sbjct: 898 MPGPTGVIVVKGLQRSAASKGDLAI 922
>gi|147784030|emb|CAN72304.1| hypothetical protein VITISV_036274 [Vitis vinifera]
Length = 506
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 139 SLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACA 198
+L F VV+ SP+NVILGR W+H M+A+PST HQ++ + T G ++ G Q A C
Sbjct: 423 TLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQMVSFLTBEGQTDLYGSQLAARQCY 482
Query: 199 VLA 201
+A
Sbjct: 483 QIA 485
>gi|77556646|gb|ABA99442.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1767
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 76/176 (43%), Gaps = 6/176 (3%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + PH D LVIS +I V+RIL+D GSS +++ KM L +
Sbjct: 683 ISFGPEDAEGVLFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQTLA 742
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
L G G G LL+ S + F VV YN I GR ++K
Sbjct: 743 PAPTSLRGFGGEAVQVLGQALLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKF 802
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLALKETKRKDSNFENQAKQDVK 221
A+ + L G+ ++G Q +A + LA+ R N E + + K
Sbjct: 803 EAISHHNYLKLKMPGPTGVIVVKGLQPSAASKRDLAI--INRAVHNVETEPHERPK 856
>gi|147774635|emb|CAN76623.1| hypothetical protein VITISV_015232 [Vitis vinifera]
Length = 512
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%)
Query: 62 SPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGI 121
S H L IS+ V IL+DNGS++N+ AT +R Q +
Sbjct: 276 SDHTRPLYISVGCSGRRVPSILLDNGSALNVCPLATAIALRYAPSDFGPSTQTVRAYDST 335
Query: 122 VTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
G + + ++ + LT F V++ ++ +N++LGR WIH+ A+PS+ HQ
Sbjct: 336 RREVMGTLEIELLIGPATFLTVFQVLRISTSFNLLLGRPWIHRSGAIPSSLHQ 388
>gi|51038074|gb|AAT93877.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1418
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D G++VN++ AT K+ R +D IK L G
Sbjct: 853 HLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKT-NMVLKDFGGNP 911
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 912 SETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 965
>gi|78708117|gb|ABB47092.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1064
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 69/157 (43%), Gaps = 4/157 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + PH D LVIS +I V+RIL+D GSS +I+ KM L +
Sbjct: 24 ISFGPEDAEGVLFPHQDPLVISAEIAGFEVRRILVDEGSSADIIFAEAYAKMGLPTQALT 83
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
L G G G LL+ S + F VV YN I GR ++K
Sbjct: 84 PAPASLRGFGGEPVQVLGQALLLIAFGSGDNRREEQILFDVVDIPYNYNAIFGRATLNKF 143
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
A+ + L G+ ++G Q +A LA+
Sbjct: 144 EAISHHNYLKLKMPGPTGVIVVKGLQPSASPKGDLAI 180
>gi|18568255|gb|AAL75989.1|AF466204_4 putative GAG-POL precursor -orf1 protein [Sorghum bicolor]
Length = 841
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 46 SLSEVSFLPQD-LKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLE 104
S E+SF +D I P L++ I + +R+L+D GSS++IL ++ +++
Sbjct: 612 SHREISFSRKDQWAAIPEPGRFPLILDPCINSIRFERVLMDGGSSIDILFRNSLPALKIS 671
Query: 105 QDKIKLFEQPLIG-LSGIVTNSDGVITLLVIAKS----YSLLTDFLVVKATSPYNVILGR 159
++K ++ G L G + G ITL V + ++ +F+V Y+ ILGR
Sbjct: 672 PTQLKPYDAQFWGVLPGQSSVPLGQITLPVQFGTPDHFWTEFVNFVVADFDGTYHAILGR 731
Query: 160 QWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLALKETK 206
+ K AVP + VL T G+ +RG+ TA+ C + K T+
Sbjct: 732 PSLTKFMAVPHYSYLVLKMPTEKGVLTVRGNVYTAYTCEEESFKVTE 778
>gi|108709044|gb|ABF96839.1| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
[Oryza sativa Japonica Group]
Length = 406
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 4/157 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + PH D LVIS +I V RIL+D GSS +++ KM L +
Sbjct: 150 ISFGPEDAEGVMFPHQDPLVISAEIAGFEVWRILVDGGSSADVIFVEAYAKMGLPTQALT 209
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
+ G G G LL+ S + F VV YN ILGR ++K
Sbjct: 210 PAPASIRGFGGEAVQVLGQALLLIAFGSGENRREEQVLFDVVDIPYNYNAILGRATLNKF 269
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
A+ + L G+ ++G Q++A + LA+
Sbjct: 270 EAISHHNYLKLKMPGPAGVIVVKGLQSSAASKGDLAI 306
>gi|62734164|gb|AAX96273.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|77550579|gb|ABA93376.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1263
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D G++VN++ AT K+ R +D IK L G
Sbjct: 506 HLKPLYINGYVNGKPMSKMMVDGGAAVNLMSYATFWKLGRNAEDLIKT-NMVLKDFGGNP 564
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + GV+ + + S ++ T F V+ Y ++LGR WIH +PST HQ L
Sbjct: 565 SETKGVLNVELTVGSKTIPTTFFVIDGKGSYTLLLGRDWIHANCCIPSTMHQCL 618
>gi|147810674|emb|CAN76372.1| hypothetical protein VITISV_011468 [Vitis vinifera]
Length = 1342
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V ++++NGS++N+ AT +
Sbjct: 124 IVFSDDDLPPEGSDHTRPLYISVSCSGRRVPYVILENGSALNVCSLATAIALGDAPFDFD 183
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
F Q + G+I + ++ S + +T F ++ + +N++LGR WIH+ RA+P
Sbjct: 184 PFTQTVRASDSTRRKVMGIIEMELLIGSTTFVTVFQALRILTSFNLLLGRPWIHRARAIP 243
Query: 170 STCHQ 174
S+ HQ
Sbjct: 244 SSLHQ 248
>gi|78708458|gb|ABB47433.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1016
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + +I++D G+ VN++ AT K+ R +D IK L G
Sbjct: 373 HLKPLYINGYVNGMPLSKIMVDGGAVVNLMPYATFRKLGRNSEDLIKT-NMVLKDFGGNP 431
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 432 SETKGVLNVELTVGSKTVPTTFFVIDRKGSYSLLLGRDWIHANCCIPSTMHQCL 485
>gi|22539085|gb|AAN01257.1| Hypothetical protein similar to putative retroelement [Oryza sativa
Japonica Group]
gi|31431343|gb|AAP53138.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 908
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDG 127
+V+ I N V R+L+D GSS+N+L +T++ M + Q + +QP G++ + G
Sbjct: 715 IVVEPTIRNNKVVRVLVDGGSSINLLFASTLDAMGIPQSVLTPTDQPFHGITQFSSKPLG 774
Query: 128 VITLLVIAKSYSLLT----DFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
ITL V + S L F V + + YN I+GR + K A +QVL G
Sbjct: 775 KITLPVTFRQASNLRTQQITFDVAEFDTAYNAIIGRTALAKFMAASHYAYQVLKMPGPKG 834
Query: 184 IEEIRGDQATAWACAVLAL 202
I+G+ A C +L
Sbjct: 835 TITIQGNAKLAVQCDKRSL 853
>gi|147797776|emb|CAN69610.1| hypothetical protein VITISV_024102 [Vitis vinifera]
Length = 2037
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 4/124 (3%)
Query: 51 SFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKL 110
+F P + S H L I + C V +L+DNGS++N+ T + D
Sbjct: 480 AFWPH----LGSNHVRPLFIDVACLGCRVPSVLLDNGSALNVCPLVTATALGFSPDDFGP 535
Query: 111 FEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPS 170
Q + G G ++ V+ S F V++ S +N++LGR WIH+ A+PS
Sbjct: 536 STQTVRAYDGTQRTIMGTLSTHVMIGPVSYSIVFQVLRIQSSFNLLLGRPWIHEAGAIPS 595
Query: 171 TCHQ 174
+ HQ
Sbjct: 596 SLHQ 599
>gi|147837850|emb|CAN67148.1| hypothetical protein VITISV_008839 [Vitis vinifera]
Length = 1747
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%)
Query: 62 SPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGI 121
S H L IS+ V +L+DNGS++NI AT + Q +
Sbjct: 645 SDHTRPLYISVGCSGRRVPSVLLDNGSTLNICPLATAIALGYAPSDFGPSTQTVRAYDST 704
Query: 122 VTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
G + + ++ + +T F V++ + +N++LGR WIH+ RA+PS+ HQ
Sbjct: 705 RREVMGTLEIELLIGPTTFITVFQVLRIPTSFNLLLGRPWIHRARAIPSSLHQ 757
>gi|115453711|ref|NP_001050456.1| Os03g0439900 [Oryza sativa Japonica Group]
gi|113548927|dbj|BAF12370.1| Os03g0439900, partial [Oryza sativa Japonica Group]
Length = 420
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 4/157 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + PH D LVIS +I V RIL+D GSS +++ KM L +
Sbjct: 164 ISFGPEDAEGVMFPHQDPLVISAEIAGFEVWRILVDGGSSADVIFVEAYAKMGLPTQALT 223
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
+ G G G LL+ S + F VV YN ILGR ++K
Sbjct: 224 PAPASIRGFGGEAVQVLGQALLLIAFGSGENRREEQVLFDVVDIPYNYNAILGRATLNKF 283
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
A+ + L G+ ++G Q++A + LA+
Sbjct: 284 EAISHHNYLKLKMPGPAGVIVVKGLQSSAASKGDLAI 320
>gi|18581535|gb|AAK52540.2|AC078891_9 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
gi|110288541|gb|ABG65889.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1580
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D G++VN++ AT K+ R +D IK L G
Sbjct: 360 HLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKT-NMVLKDFGGNP 418
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 419 SETMGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTIHQCL 472
>gi|18057150|gb|AAL58173.1|AC093181_19 putative polyprotein [Oryza sativa Japonica Group]
Length = 1931
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 57/129 (44%), Gaps = 7/129 (5%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + PH D LVIS +I V+RIL+D GSS +++ M L +
Sbjct: 772 ISFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYATMGLPTQSLT 831
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
L G G G LL+ S + F VV YN I GR ++K
Sbjct: 832 PAPTSLHGFGGEAVQVLGQALLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKF 891
Query: 166 RAVPSTCHQ 174
A+ CH
Sbjct: 892 EAI---CHH 897
>gi|147801322|emb|CAN77032.1| hypothetical protein VITISV_015343 [Vitis vinifera]
Length = 2281
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL L S H L ISI V +L+DNGS++N+ TV +
Sbjct: 739 IVFSDDDLPLEGSGHTCPLYISIGCSGRRVPSVLLDNGSALNVCPLTTVIALGYAPSDFG 798
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + +T F V++ + +N++LGR WIH+ A+P
Sbjct: 799 PSTQTVRAYDSTRREVMGTLEIELLIGPTTFITIFQVLRIPASFNLLLGRPWIHRAGAIP 858
Query: 170 STCHQ 174
S+ HQ
Sbjct: 859 SSLHQ 863
>gi|110288971|gb|AAP53331.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 2035
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 57/129 (44%), Gaps = 7/129 (5%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + PH D LVIS +I V+RIL+D GSS +++ M L +
Sbjct: 849 ISFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYATMGLPTQSLT 908
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
L G G G LL+ S + F VV YN I GR ++K
Sbjct: 909 PAPTSLHGFGGEAVQVLGQALLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKF 968
Query: 166 RAVPSTCHQ 174
A+ CH
Sbjct: 969 EAI---CHH 974
>gi|77556346|gb|ABA99142.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1342
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 4/157 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D K + PH D LVIS +I V+RIL+D GSS +++ KM +
Sbjct: 553 ISFGPEDAKGVMLPHQDPLVISTEIAGFEVRRILVDGGSSADVIFAEAYAKMGFPTQALT 612
Query: 110 LFEQPLIGLSGIVTNSDG-VITLLVIAKSYSLLTD---FLVVKATSPYNVILGRQWIHKM 165
L G G G ++++ + + F VV YN I GR ++K
Sbjct: 613 PAPASLCGFGGEAVQVLGQALSMIAFGSGENRREEQVLFDVVDIPYNYNGIFGRATLNKF 672
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
A+ + L G+ ++G Q +A + LA+
Sbjct: 673 EAISHHNYLKLKMPGPAGVIVVKGLQPSAASKGDLAI 709
>gi|77551588|gb|ABA94385.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1700
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I+ + + ++++D G++VN++ AT K+ D + L G +
Sbjct: 809 HLKPLYINRFVNGKPMSKMMVDGGAAVNLMPYATFRKLGRSADDLIKMNMVLKDFGGNPS 868
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ GV+ + + + + T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 869 ETKGVLNVELTVGNKIVPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 921
>gi|77553849|gb|ABA96645.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1645
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I+ + + +I++D G++VN++ AT K+ + + L G +
Sbjct: 596 HLKPLYINGYVNGKPMSKIMVDGGAAVNLMPYATFRKLGRNAEDLIRTNMVLKDFGGNPS 655
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ GV+ + + S ++ T F V+ Y+++LGR WIH VPST Q L
Sbjct: 656 ETKGVLNVEMTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCVPSTMQQCL 708
>gi|38345832|emb|CAE01862.2| OSJNBa0070M12.15 [Oryza sativa Japonica Group]
Length = 1685
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I+ + + ++++D G++VN++ T K+ + + L G +
Sbjct: 736 HLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYTTFRKLGRTTEDLMKTNMVLKDFGGNPS 795
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 796 ETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 848
>gi|62732709|gb|AAX94828.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|62734472|gb|AAX96581.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|77550394|gb|ABA93191.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1205
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D G++VN++ AT K+ R +D IK L G
Sbjct: 816 HLKPLYINGYVNGKPMSKMMVDGGAAVNLIPYATFRKLGRNAEDLIKT-NMVLKDFGGNP 874
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + GV+ + + + ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 875 SETKGVLNVELTVGNKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 928
>gi|21743003|emb|CAD40096.1| OSJNBb0012A12.6 [Oryza sativa Japonica Group]
gi|38347024|emb|CAE02552.2| OSJNBb0069N01.26 [Oryza sativa Japonica Group]
Length = 243
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D G++VN++ AT K+ R D IK L G
Sbjct: 45 HLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNSYDLIKT-NMVLKDFGGNP 103
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 104 SETKGVLNVELTVGSKTVPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 157
>gi|14018058|gb|AAK52121.1|AC079936_17 Putative retroelement [Oryza sativa Japonica Group]
Length = 2079
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V R+LID GSS+N+L +T+E M + Q ++ +QP G++ ++
Sbjct: 872 IVVEPTIRNIKVARVLIDGGSSINLLFASTLEAMGIPQSELTPTDQPFHGITPQSSSRPL 931
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V ++ + T+ F V + + YN I+GR + K A +QVL
Sbjct: 932 GKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFVAASHYAYQVLKMPGPK 991
Query: 183 GIEEIRGDQATAWAC 197
G I+G+ A C
Sbjct: 992 GTITIQGNAKLAVQC 1006
>gi|29126356|gb|AAO66548.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
Length = 1380
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V R+LID GSS+N+L +T++ M + Q ++ +QP G++ ++
Sbjct: 643 IVVEPTIRNIKVARVLIDGGSSINLLFTSTLDAMGIPQSELTPTDQPFHGITPQSSSRPL 702
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V +S + T+ F V + + YN I+GR + K A +QVL
Sbjct: 703 GKITLPVTFGQSNNFRTEQITFDVAEFDTAYNAIIGRTALAKFMAASHYAYQVLKMPGPK 762
Query: 183 GIEEIRGDQATAWAC 197
G I+G+ A C
Sbjct: 763 GTITIQGNTKLAVQC 777
>gi|41393250|gb|AAS01973.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
Length = 1403
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V R+LID GSS+N+L +T++ M + Q ++ +QP G++ ++
Sbjct: 666 IVVEPTIRNIKVARVLIDGGSSINLLFTSTLDAMGIPQSELTPTDQPFHGITPQSSSRPL 725
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V +S + T+ F V + + YN I+GR + K A +QVL
Sbjct: 726 GKITLPVTFGQSNNFRTEQITFDVAEFDTAYNAIIGRTALAKFMAASHYAYQVLKMPGPK 785
Query: 183 GIEEIRGDQATAWAC 197
G I+G+ A C
Sbjct: 786 GTITIQGNTKLAVQC 800
>gi|13486715|dbj|BAB39950.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1579
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D ++ PH D LVIS +I V+RIL+D GSS +++ KM L +
Sbjct: 426 ISFGPEDAGVM-FPHQDLLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLSTQALT 484
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
L G G G LL+ S + F V+ YN I GR ++K+
Sbjct: 485 PAPASLRGFGGEAVQVLGQALLLIAFGSGENRREEQILFDVIDIPYNYNAIFGRASLNKL 544
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
A+ + L G+ ++G Q +A A LA+
Sbjct: 545 EAISHHNYLKLKMPGPTGVIVVKGLQPSAAAKGDLAI 581
>gi|78708515|gb|ABB47490.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1783
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V R+LID GSS+N+L +T+E M + Q ++ +QP G++ ++
Sbjct: 840 IVVEPTIRNIKVARVLIDGGSSINLLFASTLEAMGIPQSELTPTDQPFHGITPQSSSRPL 899
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V ++ + T+ F V + + YN I+GR + K A +QVL
Sbjct: 900 GKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFVAASHYAYQVLKMPGPK 959
Query: 183 GIEEIRGDQATAWAC 197
G I+G+ A C
Sbjct: 960 GTITIQGNAKLAVQC 974
>gi|108712180|gb|ABF99975.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1413
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V R+LID GSS+N+L +T++ M + Q ++ +QP G++ ++
Sbjct: 676 IVVEPTIRNIKVARVLIDGGSSINLLFTSTLDAMGIPQSELTPTDQPFHGITPQSSSRPL 735
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V +S + T+ F V + + YN I+GR + K A +QVL
Sbjct: 736 GKITLPVTFGQSNNFRTEQITFDVAEFDTAYNAIIGRTALAKFMAASHYAYQVLKMPGPK 795
Query: 183 GIEEIRGDQATAWAC 197
G I+G+ A C
Sbjct: 796 GTITIQGNTKLAVQC 810
>gi|38567643|emb|CAE75881.1| B1234D02.5 [Oryza sativa Japonica Group]
Length = 970
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D G++VN++ AT K+ R +D IK L G
Sbjct: 794 HLKPLNINGYVNGKPMSKMMVDGGTAVNLMPYATFRKLGRNAEDLIKT-NMVLKDFGGNP 852
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
+ GV+ + + + ++ T F V+ Y+++LGR WI+ +PS HQ L
Sbjct: 853 LETKGVLNVELTVGNKTITTTFFVIDGKGSYSLLLGRDWINANCCIPSIMHQCLIQWQGD 912
Query: 183 GIEEIRGDQATAWACAVLALKE 204
IE + D++ A A LAL E
Sbjct: 913 KIEIVPADRSVNVASADLALWE 934
>gi|147800365|emb|CAN62141.1| hypothetical protein VITISV_038647 [Vitis vinifera]
Length = 2068
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 59/125 (47%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 586 IVFSDDDLPPEGSGHTHPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSNFG 645
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + +T F V++ + +N++LGR WIH+ A+P
Sbjct: 646 PSTQTVRAYDSTRKEVMGTLEIELLIGTTTFITIFQVLRIPTSFNLLLGRPWIHRAGAIP 705
Query: 170 STCHQ 174
S+ HQ
Sbjct: 706 SSLHQ 710
>gi|22748420|gb|AAN05385.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 629
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 4/157 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + PH D LVIS +I V+RIL+D GSS +++ KM L +
Sbjct: 442 ISFGPEDAEGVIFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALT 501
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
L G S G LL+ S + F VV YN I GR ++K
Sbjct: 502 PAPASLRGFSREAVQVLGQTLLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKF 561
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
A+ + L G+ ++G Q +A + LA+
Sbjct: 562 EAISHHNYLKLKMPGPTGVIVVKGLQPSAASKGDLAI 598
>gi|24796790|gb|AAN64467.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108709267|gb|ABF97062.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1152
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D G++VN++ AT K+ R +D IK L G
Sbjct: 738 HLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKT-NMVLKDFGGNP 796
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ GV+ + + S ++ T F V+ Y+++LGR WIH +PST H L
Sbjct: 797 LETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANYCIPSTMHHCL 850
>gi|50881459|gb|AAT85304.1| reverse transcriptase (RNA-dependent DNA polymerase) domain
containing protein [Oryza sativa Japonica Group]
gi|108708517|gb|ABF96312.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1372
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D G++VN++ AT K+ R +D IK L G
Sbjct: 433 HLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNVEDLIKT-NMVLKDFGGNP 491
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + GV+ + + + ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 492 SETKGVLNVELTVGNKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 545
>gi|38567757|emb|CAE76044.1| B1248C03.3 [Oryza sativa Japonica Group]
gi|38569163|emb|CAE75872.1| OSJNBa0042N22.17 [Oryza sativa Japonica Group]
Length = 1436
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 55/109 (50%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDG 127
L I+ + + ++++D G++VN++ T K+ + + L G + + G
Sbjct: 889 LYINGYVNGKPMSKMMVDGGAAVNLMPYTTFRKLGRNAEDLIRMNMVLKDFGGNSSETKG 948
Query: 128 VITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
V+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 949 VLNVELTVGSKTIPTSFFVIDGKGSYSLLLGRDWIHVNCCIPSTMHQCL 997
>gi|449479777|ref|XP_004155704.1| PREDICTED: uncharacterized protein LOC101228241 [Cucumis sativus]
Length = 924
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 3/142 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F +DL L H+ L +S + V RILIDNGS+VNI+ +T+ ++ + D++
Sbjct: 334 IDFSDEDLLLGSKLHNRPLYVSGYVREQRVDRILIDNGSAVNIMPKSTMWQLGILMDELS 393
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ + G + + G+I L +I F V+ + + Y +LG WIH V
Sbjct: 394 NSKLVIQGFNQGSQRAIGMIRLELIIGDLKASALFHVIDSRTTYKSLLGCPWIHGNGVVT 453
Query: 170 STCHQVL-CYQTIYGIEEIRGD 190
ST HQ YQ G++++ D
Sbjct: 454 STLHQCFKFYQD--GVKKVEAD 473
>gi|38346489|emb|CAE03728.2| OSJNBa0021F22.22 [Oryza sativa Japonica Group]
gi|58532093|emb|CAD40054.3| OSJNBa0085C10.6 [Oryza sativa Japonica Group]
Length = 897
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIVTNSD 126
L I+ + L+ ++++D G++VN++ T K+ R +D IK L G +
Sbjct: 472 LYINSYVNGKLMTKMMVDGGAAVNLMPYVTFRKLGRNTEDLIKT-NMVLKDFGGNPSGKK 530
Query: 127 GVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
GV+ + + ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 531 GVLNVELTVSGKTVPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 580
>gi|147790279|emb|CAN67735.1| hypothetical protein VITISV_012279 [Vitis vinifera]
Length = 476
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 30 IVTFKRGLPSN----------HPFFESLSE---------VSFLPQDLKLIQSPHDDALVI 70
++ + G PS+ HP +++ E + F P DL I PH DAL++
Sbjct: 300 VINYINGGPSDEDIGTRAYQLHPAWDNWGEGRPRPIDGTIIFPPVDLTRILQPHRDALIM 359
Query: 71 SIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVIT 130
S++IG+ V+RIL+D GSS +++ + + M ++ + L G +G T S G I
Sbjct: 360 SLEIGDFDVRRILVDLGSSADLVQASVISHMGHSLTGLENLGRILSGFNGSSTTSLGDIV 419
Query: 131 LLVIAKSYSLLTDFLV 146
L V A S +L F V
Sbjct: 420 LPVQAGSVTLNVQFSV 435
>gi|260446986|emb|CBG76268.1| OO_Ba0005L10-OO_Ba0081K17.19 [Oryza officinalis]
Length = 1969
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 6/145 (4%)
Query: 53 LPQDLKLIQSPHDDA------LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQD 106
L D + P DD+ L I I + ++L+D G++VN++ T K+ +
Sbjct: 819 LSPDQAIFDKPVDDSYRHLRPLCIKGFINGRPMTKMLVDGGAAVNLMPYTTFRKLGKVPE 878
Query: 107 KIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMR 166
+ L G + + GV+ + + S ++ T F V Y+++LGR WIH
Sbjct: 879 HLIKTNMVLKDFGGNASEAKGVLNVELTVGSKTIPTTFFVFDGKGSYSLLLGRDWIHANC 938
Query: 167 AVPSTCHQVLCYQTIYGIEEIRGDQ 191
VPST HQ L +E ++ D+
Sbjct: 939 CVPSTMHQCLMQWQGDQVEIVQADR 963
>gi|21672028|gb|AAM74390.1|AC119149_5 Putative retroelement [Oryza sativa Japonica Group]
Length = 1123
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 4/158 (2%)
Query: 49 EVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
++SF P D + + PH D+LVIS +I V+RIL+D GSS +++ KM L +
Sbjct: 23 QISFGPGDAEGVMFPHQDSLVISAEIAGLEVQRILVDGGSSADVIFAEAYAKMGLSTLAL 82
Query: 109 KLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHK 164
L L G G+ LLV + + F VV YN I G ++K
Sbjct: 83 TLAPASLRGFDREAVQVLGLTQLLVAFGTGENRREEQVLFDVVDIPYNYNAIFGHATLNK 142
Query: 165 MRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
A+ + L G+ ++G Q++A + LA+
Sbjct: 143 FEAISHHNYPKLKTLGPAGVIVVKGLQSSASSKGDLAI 180
>gi|77553900|gb|ABA96696.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1287
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 86/196 (43%), Gaps = 24/196 (12%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPH 64
E+++ Y+RRF A +V++ + I + + + L +D + I PH
Sbjct: 278 ESIREYMRRFSQARCQVQDITEASVI---------------NAASIGLL-EDAEGIMFPH 321
Query: 65 DDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTN 124
D LVIS +I + V+RIL+D G+S +++ T KM L + L G G
Sbjct: 322 QDPLVISAEIASFEVRRILVDGGTSADVIFAGTYAKMGLPTLSLTQAPVSLRGFGGEAVQ 381
Query: 125 SDGVITLLVI------AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCY 178
G LLV + +L D + + YN I G ++K A+ + L
Sbjct: 382 VLGQAQLLVAFGTGENRREEQILFDMVDIPYN--YNAIFGGATLNKFEAISHHNYLELKM 439
Query: 179 QTIYGIEEIRGDQATA 194
+ G+ ++G QA+A
Sbjct: 440 PGLIGVIVVKGLQASA 455
>gi|29244661|gb|AAO73254.1| putative GAG-POL precursor [Oryza sativa Japonica Group]
gi|108709218|gb|ABF97013.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 908
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 4/157 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D K + PH D LVIS +I V+RIL+D GSS +++ KM L +
Sbjct: 696 ISFGPEDAKGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALT 755
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
+ L G G G L+ S + F VV YN I GR ++K
Sbjct: 756 PAPESLHGFGGEAVQILGQALFLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKF 815
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
A+ + L G+ ++G Q +A + LA+
Sbjct: 816 EAISHHNYLKLKMPGPTGVIVVKGLQPSAASKGDLAI 852
>gi|19881722|gb|AAM01123.1|AC108884_5 Putative retroelement [Oryza sativa Japonica Group]
gi|31431922|gb|AAP53628.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1292
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 4/157 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + PH D LVIS +I V+RIL+D GSS +++ KM L +
Sbjct: 345 ISFGPEDAEGVIFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALT 404
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
L G G G LL+ S + F VV YN I GR ++K
Sbjct: 405 PAPVSLRGFGGEAVQVLGQTLLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKF 464
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
A+ + L + ++G Q +A + LA+
Sbjct: 465 EAISHHNYLKLKMPGPTAVIVVKGLQPSATSKGDLAI 501
>gi|147815054|emb|CAN72336.1| hypothetical protein VITISV_038597 [Vitis vinifera]
Length = 184
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 58/108 (53%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F P D + PH D L++++ I + V++IL+D GSS+N+L +T +M +K
Sbjct: 57 ITFPPLDPNRVLHPHKDVLILTLGISDFDVRQILVDPGSSINLLQLSTYRQMGFSPSALK 116
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVIL 157
+ L +G T S G + LLV A F +V+ SP+N I+
Sbjct: 117 NLRRILSRFNGASTISLGDVVLLVQAGPVIQNVHFSMVEDLSPFNTIM 164
>gi|147800134|emb|CAN73207.1| hypothetical protein VITISV_009747 [Vitis vinifera]
Length = 163
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Query: 72 IKIGNCL-VKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVIT 130
++IGN V +ILID +S ++L + +M + ++ LIG +G S G +
Sbjct: 7 LEIGNFRDVCKILIDLRNSTDLLQMSAYRQMGYSLSTLDNLDRILIGFNGASIVSMGDVI 66
Query: 131 LLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCY 178
L + A +L F +V+ PYN I+G W+HKM+ + ST HQ++ Y
Sbjct: 67 LPIQASPVTLNVLFSIVEDLLPYNAIMGGVWLHKMKVISSTYHQMVSY 114
>gi|38346515|emb|CAE03810.2| OSJNBa0027H09.10 [Oryza sativa Japonica Group]
gi|38567795|emb|CAE76081.1| B1340F09.19 [Oryza sativa Japonica Group]
Length = 1570
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSD 126
LV+ + N ++R LID GS++NIL T++ M++ + ++K P +G + G+
Sbjct: 709 LVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFLGVIPGLSATPL 768
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V + T+ F V + Y+ ILGR + K AVP + ++
Sbjct: 769 GQITLPVTFGTRENFRTENICFEVADFETAYHAILGRPALAKFMAVPHYTYMIMKMPGPR 828
Query: 183 GIEEIRGDQATAWAC 197
G+ +R D A C
Sbjct: 829 GVSSLRSDIKQAVTC 843
>gi|13940598|gb|AAK50400.1|AC021891_1 Putative retroelement [Oryza sativa Japonica Group]
Length = 1291
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 4/157 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + PH D LVIS +I V+RIL+D GSS +++ KM L +
Sbjct: 412 ISFGPEDAEGVIFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALT 471
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
L G G G LL+ S + F VV YN I GR ++K
Sbjct: 472 PAPVSLRGFGGEAVQVLGQTLLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKF 531
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
A+ + L + ++G Q +A + LA+
Sbjct: 532 EAISHHNYLKLKMPGPTAVIVVKGLQPSATSKGDLAI 568
>gi|147768539|emb|CAN60625.1| hypothetical protein VITISV_027087 [Vitis vinifera]
Length = 2221
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 58/125 (46%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V + +DNGS++N+ AT +
Sbjct: 593 IVFSDDDLPPEGSDHTRPLYISVGFSGRRVPSVFLDNGSALNVCPLATAIALGYAPSDFG 652
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + +T F V++ +P+N++LGR WIH+ A+P
Sbjct: 653 PSTQTVRAYDSTRREVMGTLEIELLIGPTTFITIFQVLRIPTPFNLLLGRPWIHRAGAIP 712
Query: 170 STCHQ 174
S+ HQ
Sbjct: 713 SSLHQ 717
>gi|110288766|gb|AAP52584.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1486
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V R+LID GSS+N+L +T++ M L Q ++ +QP G++ ++
Sbjct: 673 IVVEPTIQNIKVARVLIDGGSSINLLCTSTLDAMGLPQSELTPTDQPFHGITPQSSSRPL 732
Query: 127 GVITL-LVIAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL + ++ + T+ F V + + YN I+GR + K A +QVL
Sbjct: 733 GKITLPMTFGQANNFRTEQITFDVAEFDTAYNTIIGRTALAKFMAASHYAYQVLKIPGPK 792
Query: 183 GIEEIRGDQATAWAC 197
G I+G+ A C
Sbjct: 793 GTIIIQGNAKLAVQC 807
>gi|22857591|gb|AAN09865.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1469
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V R+LID GSS+N+L +T++ M L Q ++ +QP G++ ++
Sbjct: 656 IVVEPTIQNIKVARVLIDGGSSINLLCTSTLDAMGLPQSELTPTDQPFHGITPQSSSRPL 715
Query: 127 GVITL-LVIAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL + ++ + T+ F V + + YN I+GR + K A +QVL
Sbjct: 716 GKITLPMTFGQANNFRTEQITFDVAEFDTAYNTIIGRTALAKFMAASHYAYQVLKIPGPK 775
Query: 183 GIEEIRGDQATAWAC 197
G I+G+ A C
Sbjct: 776 GTIIIQGNAKLAVQC 790
>gi|77551417|gb|ABA94214.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1917
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D G++VN++ AT K+ R +D IK L G
Sbjct: 844 HLKPLYINGYVNGNPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKT-NMVLKDFGGNT 902
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + GV+ + + S ++ T F V+ Y+++LGR WIH + ST HQ L
Sbjct: 903 SETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCISSTMHQCL 956
>gi|55168025|gb|AAV43893.1| putative polyprotein [Oryza sativa Japonica Group]
gi|55168066|gb|AAV43934.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1565
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 46 SLSEVSFLPQD-LKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLE 104
S ++ F QD K P +V+ I N V R+LID GSS+N+L +T++ M +
Sbjct: 648 SEQKIEFSEQDHPKTAVIPGQYPIVVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIP 707
Query: 105 QDKIKLFEQPLIGLSGIVTNSD-GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGR 159
Q ++ +QP G++ ++ G ITL V ++ + T+ F V + + YN I+GR
Sbjct: 708 QSELTPTDQPFHGITPQSSSRPLGKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGR 767
Query: 160 QWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
+ K A +QVL G ++G+ A C
Sbjct: 768 TALAKFMAASHYAYQVLKMSGPKGTITVQGNAKLAVQC 805
>gi|77549295|gb|ABA92092.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1658
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 5/140 (3%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSG-I 121
P +V+ I N V R+LID GSS+N+L +T++ M + Q ++ +QP+ G++
Sbjct: 638 PRRYPIVVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPQSELTPTDQPVHGITPQS 697
Query: 122 VTNSDGVITL-LVIAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLC 177
++ G ITL + ++ + T+ F V + + YN I+GR + K A +QVL
Sbjct: 698 LSRPLGKITLPMTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFMAASHYAYQVLK 757
Query: 178 YQTIYGIEEIRGDQATAWAC 197
G I+G+ A C
Sbjct: 758 MPGPKGTITIQGNTKLAVQC 777
>gi|147781100|emb|CAN62911.1| hypothetical protein VITISV_036452 [Vitis vinifera]
Length = 2129
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL L S H L IS+ V + +DNGS++N+ AT +
Sbjct: 619 IVFSDDDLPLEGSGHTRPLYISVGCSGRRVPSVFLDNGSALNVGPLATTIALGYAPSDFG 678
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + +T F V++ + +N++LGR WIH+ A+P
Sbjct: 679 PSTQTVRAYDSTRREVMGTLEIELLIGPTTFITIFQVLRIPTSFNLLLGRPWIHRAGAIP 738
Query: 170 STCHQ 174
S+ HQ
Sbjct: 739 SSLHQ 743
>gi|116308912|emb|CAH66043.1| OSIGBa0107A02.4 [Oryza sativa Indica Group]
Length = 1506
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D+G++VN++ AT K+ R +D IK L SG
Sbjct: 844 HLKPLYINDYVNGKPMSKMMVDSGAAVNLMPYATFRKLGRNAEDLIKT-NMVLKDFSGNP 902
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + GV+ + V S ++ T F V+ Y+++LGR IH +PST HQ L
Sbjct: 903 SETKGVLNVEVTVGSKTIPTTFFVIDGKGSYSLLLGRDRIHANCCIPSTMHQCL 956
>gi|62732770|gb|AAX94889.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 589
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Query: 55 QDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQ 113
+ L+ ++ H L I+ + + ++++D G++VN++ T K+ R +D IK
Sbjct: 304 EKLEGTENRHLKPLYINCYVNGKPMSKMMVDGGAAVNLMPYTTFRKLGRNAEDLIKT-NM 362
Query: 114 PLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCH 173
L G + + GV+ + + + ++ T F V+ Y++++GR WIH +PST H
Sbjct: 363 VLKDFGGNPSETKGVLNVGLTVGNKTIPTTFFVLDGKGSYSLLVGRDWIHANCCIPSTMH 422
Query: 174 QVL 176
Q L
Sbjct: 423 QCL 425
>gi|147811572|emb|CAN67636.1| hypothetical protein VITISV_031868 [Vitis vinifera]
Length = 432
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 66 DALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNS 125
+AL++S+ IG+ V++IL+D GS ++L + +++M ++ + L G + S
Sbjct: 292 NALILSLGIGDFDVRQILVDLGSLTDLLQVSVIKQMGFVSSSLENMGRILXGFNRASATS 351
Query: 126 DGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIE 185
G + L V A +L F V +H M+ +PSTCHQ++ + T G
Sbjct: 352 LGDVVLPVQAGLVTLNVQFSV---------------LHCMKTIPSTCHQMVSFLTKDGQI 396
Query: 186 EIRGDQATAWACAVLALKETKRKD 209
++ Q AW C +A + D
Sbjct: 397 DLYDSQLVAWQCYQIAREAGSSND 420
>gi|359481118|ref|XP_003632571.1| PREDICTED: uncharacterized protein LOC100854783 [Vitis vinifera]
Length = 2085
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L I++ V +L+DNGS++N+ AT +
Sbjct: 502 IVFFADDLPPEGSDHTRPLYITVVCSGHRVPSVLLDNGSALNVCPLATTIALGFAPSDFG 561
Query: 110 LFEQPLIGLSGIVTNSDGVIT--LLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRA 167
Q + G +T LL+ ++S+L F V++ + +N++LGR WIH+ A
Sbjct: 562 PSTQTVRAYDSTQREVMGTLTMDLLIDPTTFSIL--FQVLRIPASFNLLLGRPWIHQAGA 619
Query: 168 VPSTCHQ 174
+PS+ HQ
Sbjct: 620 IPSSLHQ 626
>gi|359477856|ref|XP_003632035.1| PREDICTED: uncharacterized protein LOC100854167 [Vitis vinifera]
Length = 2300
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 14/132 (10%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRL------ 103
+ F DL S H L I++ V +L+DNGS++N+ AT +
Sbjct: 682 IVFSADDLPSEGSDHTRPLYITVVCSGHRVPSVLLDNGSALNVCPLATAIALGFAPSDFG 741
Query: 104 -EQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWI 162
++ ++ G+ G +T I LL+ ++S+L F V++ + +N++LGR WI
Sbjct: 742 PSTQTVRAYDSTQRGVMGTLT-----IDLLIGPTTFSIL--FQVLRIPASFNLLLGRPWI 794
Query: 163 HKMRAVPSTCHQ 174
H+ A+PS+ HQ
Sbjct: 795 HQAGAIPSSLHQ 806
>gi|78708038|gb|ABB47013.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1475
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 4/157 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + PH D LVIS +I V+RI +D GSS +++ KM L +
Sbjct: 407 ISFGPEDAEGVMFPHQDPLVISAEIAGFEVRRIQVDGGSSADVIFAEAYAKMGLPTQALT 466
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
L G G LL+ S + F VV YN ILGR ++K
Sbjct: 467 PAPASLRGFGREAVQVLGQALLLIAFGSGESRREEQVLFDVVDIPYNYNAILGRATLNKF 526
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
A+ + +L G+ ++G Q A + LA+
Sbjct: 527 EAISHHNYLMLKMPGPVGVIVVKGLQPLAASKGDLAI 563
>gi|34761724|gb|AAQ82035.1| gag/pol polyprotein [Pisum sativum]
Length = 1105
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 6/144 (4%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
V F DL H+ AL I+++ ++ +L+D GSS+N+L + ++K+ +E +
Sbjct: 813 VGFTNLDLPPEGRNHNKALHITMECKGAVLSHVLVDTGSSLNVLPNQILKKIDVEGFVLT 872
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ + G + G +TL V F V+ Y+ +LGR WIH AV
Sbjct: 873 PSDLIVRAFDGSKRSVCGEVTLPVKIGPEVFDIIFYVMDIQPAYSCLLGRPWIHAAGAVS 932
Query: 170 STCHQVLCY------QTIYGIEEI 187
ST HQ L Y T+ G EEI
Sbjct: 933 STLHQKLKYVWNGQIVTVCGEEEI 956
>gi|52353720|gb|AAU44286.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1316
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I+ + + ++++D G++VN++ AT K+ D + L G +
Sbjct: 664 HLKPLYINGFVNGKPMSKMMVDRGAAVNLMPYATFRKLSRNPDDLIKNNMVLKDFGGNPS 723
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ GV + S ++ T F V+ Y+++LGR WI+ +PST HQ L
Sbjct: 724 ETKGVFNVEQTVDSKTVPTTFFVIDGKGSYSLLLGRDWINANYCIPSTMHQCL 776
>gi|77548425|gb|ABA91222.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1059
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 57/116 (49%)
Query: 61 QSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSG 120
++ H L I+ + + ++++D G+ VN++ T K+ D + L G
Sbjct: 406 ENRHLKPLYINGFVNGKPMSKMMVDGGAVVNLMPYTTFRKLGKNPDDLIKTNMILKDFGG 465
Query: 121 IVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 466 NPSETKGVLNVELTVGSKTVPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 521
>gi|62734310|gb|AAX96419.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 916
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D G++VN++ AT K+ R +D IK L L G
Sbjct: 130 HLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKT-NMVLKELCGNP 188
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
+ + GV+ + + S ++ T F V+ Y+++L R WIH +PST HQ L +
Sbjct: 189 SETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLERDWIHANCCIPSTMHQCLIHWQGD 248
Query: 183 GIEEIRGD 190
IE + D
Sbjct: 249 RIEIVPAD 256
>gi|147838301|emb|CAN74448.1| hypothetical protein VITISV_042601 [Vitis vinifera]
Length = 2254
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 707 IVFSDDDLPPEGSGHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSNFG 766
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + +T F V++ + +N++LGR WIH+ A+P
Sbjct: 767 PSTQTVRAYDSTRREVMGTLEIELLIGPTTFITIFQVLRIPTSFNLLLGRPWIHRAGAIP 826
Query: 170 STCHQ 174
S+ HQ
Sbjct: 827 SSLHQ 831
>gi|147775414|emb|CAN64945.1| hypothetical protein VITISV_019048 [Vitis vinifera]
Length = 1929
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 58/125 (46%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL L S H L +S+ V +L+DNGS++N+ AT +
Sbjct: 554 IVFSDDDLSLEGSDHTRPLYVSVGCSGRRVPSVLLDNGSALNVCPLATAITLGYAPSNFG 613
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + +T F V++ + +N++LGR WIH+ +P
Sbjct: 614 PSTQTVQAYDSTRREVMGTLEIELLIGPTTFITIFQVLRIPTSFNLLLGRPWIHRAGVIP 673
Query: 170 STCHQ 174
S+ HQ
Sbjct: 674 SSLHQ 678
>gi|37991888|gb|AAR06334.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1782
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D ++VN++ AT K+ R +D IK L G
Sbjct: 923 HLKPLYINGYVNGKPMSKMMVDGRAAVNLMPYATFRKLGRNAEDLIKT-NMVLKDFGGNP 981
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 982 SETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 1035
>gi|108864277|gb|ABA92934.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 586
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Query: 55 QDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQ 113
+ L+ ++ H L I+ + + ++++D G++VN++ T K+ R +D IK
Sbjct: 301 EKLEGTENRHLKPLYINCYVNGKPMSKMMVDGGAAVNLMPYTTFRKLGRNAEDLIKT-NM 359
Query: 114 PLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCH 173
L G + + GV+ + + + ++ T F V+ Y++++GR WIH +PST H
Sbjct: 360 VLKDFGGNPSETKGVLNVGLTVGNKTIPTTFFVLDGKGSYSLLVGRDWIHANCCIPSTMH 419
Query: 174 QVL 176
Q L
Sbjct: 420 QCL 422
>gi|62732772|gb|AAX94891.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|77550135|gb|ABA92932.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1032
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D G++VN++ AT K+ R +D IK L L G
Sbjct: 130 HLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKT-NMVLKELCGNP 188
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
+ + GV+ + + S ++ T F V+ Y+++L R WIH +PST HQ L +
Sbjct: 189 SETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLERDWIHANCCIPSTMHQCLIHWQGD 248
Query: 183 GIEEIRGD 190
IE + D
Sbjct: 249 RIEIVPAD 256
>gi|147767517|emb|CAN66714.1| hypothetical protein VITISV_041527 [Vitis vinifera]
Length = 2066
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L I++ V +L+DNGS++N+ AT +
Sbjct: 567 IXFSADDLPPEGSDHTRPLYITVXCSGHRVPSVLLDNGSALNVCPLATAIALGFAPSDFG 626
Query: 110 LFEQPLIGLSGIVTNSDGVIT--LLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRA 167
Q + G +T LL+ ++S+L F V++ + +N++LGR WIH+ A
Sbjct: 627 PSTQTVRAYDXTQREVMGTLTIDLLIGPTTFSIL--FQVLRIPASFNLLLGRPWIHQAGA 684
Query: 168 VPSTCHQ 174
+PS+ HQ
Sbjct: 685 IPSSLHQ 691
>gi|90265091|emb|CAH67763.1| H0124E07.10 [Oryza sativa Indica Group]
Length = 1761
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 4/157 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + PH D LVIS +I V+RIL+D GSS +++ KM L +
Sbjct: 714 ISFGPEDAEEVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALT 773
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
L G G LL+ S + F VV YN I GR ++K
Sbjct: 774 PAPASLRGFGREEVQVLGQALLLIAFGSGKNRREEQILFDVVDIPYNYNAIFGRATLNKF 833
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
A+ + L G+ ++G Q +A + LA+
Sbjct: 834 EAISHHNYLKLKMPGPTGVIVVKGLQPSAASKGDLAI 870
>gi|116308914|emb|CAH66045.1| OSIGBa0107A02.6 [Oryza sativa Indica Group]
Length = 1009
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 40 NHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVN 91
N P + SE++ +K +S H D LV+ + N ++R LID GS++N
Sbjct: 164 NTPQYLRWSEIA-----IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALN 218
Query: 92 ILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLV 146
IL T++ M++ + ++K P G + G+ G ITL V + T+ F V
Sbjct: 219 ILFAKTLDDMQIPRTELKPSNAPFHGVIPGLSATPLGQITLPVTFGTQENFRTEKVCFEV 278
Query: 147 VKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
+ YN ILGR + K AVP + ++ G+ +R D A C
Sbjct: 279 ADFETAYNAILGRPALAKFMAVPHYTYMMMKMPGPRGVISLRSDIKQAVTC 329
>gi|108709592|gb|ABF97387.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1618
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D ++VN++ AT K+ R +D IK L G
Sbjct: 746 HLKPLYINGYVNGKPMSKMMVDGRAAVNLMPYATFRKLGRNAEDLIKT-NMVLKDFGGNP 804
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 805 SETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 858
>gi|50838960|gb|AAT81721.1| putative retrotransposon protein [Oryza sativa Japonica Group]
gi|108710481|gb|ABF98276.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1002
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 5/140 (3%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIV 122
P + +V+ I N V R+LID GSS+N+L +T++ M + + ++ +QP G++
Sbjct: 803 PGRNPIVVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPRSELTPTDQPFHGITPQS 862
Query: 123 TNSD-GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLC 177
++ G ITL V ++ + T+ F V + + YN I+GR + K A +QVL
Sbjct: 863 SSKPLGKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFMAASHYAYQVLK 922
Query: 178 YQTIYGIEEIRGDQATAWAC 197
G I+G+ A C
Sbjct: 923 MPGPKGTITIQGNAKLAVQC 942
>gi|32487595|emb|CAE04481.1| OSJNBa0029L02.22 [Oryza sativa Japonica Group]
Length = 774
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + +++++ G++VN++ AT K+ R +D IK L G +
Sbjct: 201 HLKPLYINGYVNGKPMSKMMVNGGATVNLMPYATFRKLGRNAEDLIKT-NMVLKDFGGNL 259
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + GV+ + + S ++ F V+ Y+++LGR WIH +PST HQ L
Sbjct: 260 SKTKGVLNVELTVGSKTIPAIFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 313
>gi|38346469|emb|CAE03708.2| OSJNBa0021F22.2 [Oryza sativa Japonica Group]
gi|38346740|emb|CAE04305.2| OSJNBa0083I11.15 [Oryza sativa Japonica Group]
Length = 1563
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L ++ I + ++++D G++VN++ AT K+ R +D IK L
Sbjct: 891 HLKPLYVNGYINGKPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKT-NMVLKDFGSNP 949
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + GV+ + + + ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 950 SETKGVLNVELTVGNKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 1003
>gi|38567736|emb|CAE76024.1| B1292H11.10 [Oryza sativa Japonica Group]
Length = 1326
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 49 EVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
++SF P+D++ + PH D LVIS K+ V+RIL+D GSS +++ KM L +
Sbjct: 697 QISFGPEDVEGVLFPHQDPLVISAKVAGFEVRRILVDRGSSADVIFAEAYAKMGL--PTL 754
Query: 109 KLFEQP--LIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWI 162
L E P L G G G + L++ + + F VV YN I GR +
Sbjct: 755 ALTEAPASLRGFGGKAVQVLGQVQLVIAFGTGENRREEQILFDVVNIPYNYNAIFGRATL 814
Query: 163 HKMRAV 168
+ A+
Sbjct: 815 NMFEAI 820
>gi|32483243|emb|CAE02544.1| OSJNBb0069N01.4 [Oryza sativa Japonica Group]
gi|38344507|emb|CAE05186.2| OSJNBa0013A04.23 [Oryza sativa Japonica Group]
Length = 1235
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 60/119 (50%)
Query: 58 KLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG 117
+++++ H L + + + ++++D G++VN++ AT K+ D + L
Sbjct: 196 EVVENRHLKPLYVKGFVNGKPMSKMMVDGGAAVNLMPYATFRKLGKNADDLIKTNVVLND 255
Query: 118 LSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
G + + GV+ + + S + T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 256 FGGNPSENKGVLNVELTIGSKTDPTTFFVIDGKGSYSMLLGRDWIHANCCIPSTMHQSL 314
>gi|108864539|gb|ABA94416.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1714
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 11/138 (7%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V R+LID GSS+N+L +T++ M + Q ++ QP GI+ S
Sbjct: 744 IVVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPQSELTPTNQP---FHGIIPQSSS 800
Query: 127 ---GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQ 179
G ITL V ++ + T+ F V + + YN I+GR + K A +QVL
Sbjct: 801 RPLGKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFMAASHYAYQVLKMS 860
Query: 180 TIYGIEEIRGDQATAWAC 197
+ G I+G+ A C
Sbjct: 861 GLKGTITIQGNAKLAVQC 878
>gi|19697445|gb|AAL93080.1|AC093180_27 putative polyprotein [Oryza sativa Japonica Group]
Length = 415
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 4/124 (3%)
Query: 49 EVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
++SF P D + + PH D LVIS +I V+RIL+D G+S +++ KM L +
Sbjct: 266 QISFRPGDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGTSADVIFAEAYAKMGLATQAL 325
Query: 109 KLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHK 164
L SG G L+V ++ + F VV YN I GR ++K
Sbjct: 326 TPAPASLRRFSGEAVQVLGQAQLMVAFRTAENRREEQVLFDVVDIPYNYNAIFGRATLNK 385
Query: 165 MRAV 168
A+
Sbjct: 386 FEAI 389
>gi|116317846|emb|CAH65879.1| OSIGBa0160I04.5 [Oryza sativa Indica Group]
Length = 1221
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I+ + L+ ++++D G++VN++ AT K+ + + + G ++
Sbjct: 451 HLKPLYINGYVNGKLMSKMMVDVGAAVNLMPFATFRKLGRNAEGLIKTNMVIKDFGGNLS 510
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
+ G++ + + S ++ T F V Y+++L R WIH +PST HQ L
Sbjct: 511 ETKGILNVELTVGSKTISTTFFVTDGKGSYSLLLRRDWIHANCCIPSTMHQCLIQWQGDK 570
Query: 184 IEEIRGDQATAWACAVLALKETKR 207
IE + D+ W + L+ + R
Sbjct: 571 IEIVPADR---WRTQAIILRASWR 591
>gi|147803555|emb|CAN68715.1| hypothetical protein VITISV_004899 [Vitis vinifera]
Length = 2452
Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 58/125 (46%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ C V +++DNGS++N+ AT +
Sbjct: 9 IVFSDDDLPPEGSGHTRPLYISVGCSGCRVPSVILDNGSALNVCPLATAIALGYAPSDFG 68
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR WIH+ A+P
Sbjct: 69 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 128
Query: 170 STCHQ 174
S+ HQ
Sbjct: 129 SSLHQ 133
>gi|147775039|emb|CAN68244.1| hypothetical protein VITISV_023682 [Vitis vinifera]
Length = 1232
Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 57/125 (45%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F DL S H L I + V +L+DNGS++N+ T + D
Sbjct: 409 IAFCNDDLPPKGSNHVRPLFIDVACLGRRVSSVLLDNGSALNVCPLVTAIALGFSPDDFG 468
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G G ++ V+ S F V++ S +N++LGR WIH+ A+P
Sbjct: 469 PSTQTVRAYDGTQRTDMGTLSTHVMIGPVSYSIVFQVLRIQSSFNLLLGRPWIHEAGAIP 528
Query: 170 STCHQ 174
S+ HQ
Sbjct: 529 SSLHQ 533
>gi|147801383|emb|CAN68057.1| hypothetical protein VITISV_020837 [Vitis vinifera]
Length = 504
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S+KIG+ V+RIL+D GSS +++ + V M ++
Sbjct: 379 FPPVDPTRTLQPHRDALILSLKIGDFDVRRILVDPGSSADLVQTSVVSHMGHSLTGLENP 438
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNV 155
+ L G +G T S G I L V A +L F V+ A Y +
Sbjct: 439 GRILSGFNGSSTTSLGNIILPVQAGPVTLNVQFSVLAARQCYQI 482
Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFSQAVFQVEACSMDAVLQIFKRSICPGTPFFESLAK 158
>gi|147780530|emb|CAN60330.1| hypothetical protein VITISV_015028 [Vitis vinifera]
Length = 711
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%)
Query: 96 ATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNV 155
+ + M LE ++ + L +G T S G I L V A +L F VV+ SP+N
Sbjct: 292 SVINHMGLELSGLENLGKILSRFNGAATTSLGDIVLSVQAGPVTLNVQFSVVEDLSPFNA 351
Query: 156 ILGRQWIHKMRAVPSTCHQV 175
ILGR W+H M+ +PST HQ+
Sbjct: 352 ILGRMWLHYMKVIPSTYHQM 371
>gi|53981366|gb|AAV24920.1| putative polyprotein [Oryza sativa Japonica Group]
gi|55733857|gb|AAV59364.1| unknown protein [Oryza sativa Japonica Group]
Length = 1279
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 68/157 (43%), Gaps = 4/157 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + PH D LVIS +I V+RIL+D GSS +++ KM +
Sbjct: 632 ISFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGFPTQALT 691
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
L G G G LL+ S + F VV YN I R ++K
Sbjct: 692 PAPASLRGFGGEAVQVLGQALLLIAFGSGENRREEQILFDVVDILYNYNAIFSRATLNKF 751
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
A+ + L G+ ++G Q +A + LA+
Sbjct: 752 EAISHHNYLKLKMPGPAGVIVVKGLQPSAASKGDLAI 788
>gi|55733826|gb|AAV59333.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 923
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 5/140 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V R+LID GSS+N+L +T++ M + + ++ +QP G++ ++
Sbjct: 729 IVVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPRSELTPTDQPFHGITPQSSSEPL 788
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V ++ + T+ F V + + YN I+GR + K A +QVL
Sbjct: 789 GKITLPVTFGQASNFRTEQITFHVTEFDTAYNAIIGRTALAKYMAASHYAYQVLNMPGPK 848
Query: 183 GIEEIRGDQATAWACAVLAL 202
G I+G+ A C +L
Sbjct: 849 GTITIQGNAKLAVQCDKRSL 868
>gi|77553881|gb|ABA96677.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1412
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 49 EVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
++SF P+D + + PH + LVIS ++ V++IL+D GSS N++ KM L +
Sbjct: 240 QISFGPEDAEGVLFPHQEPLVISAEVAGFEVRQILVDGGSSANVIFAEAYAKMGLPTLAL 299
Query: 109 KLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD---------FLVVKATSPYNVILGR 159
L G G G + L V + TD F +V YN I GR
Sbjct: 300 TQAPTSLRGFGGEAVQVLGQVQLAV-----AFGTDENRREEQILFDIVDIPYNYNAIFGR 354
Query: 160 QWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
++K A+ + L G+ I+G Q +A + LA
Sbjct: 355 ATLNKFEAISHHNYLKLKMPGPAGVIMIKGLQPSATSKGDLA 396
>gi|147834845|emb|CAN68307.1| hypothetical protein VITISV_034582 [Vitis vinifera]
Length = 1881
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 58/125 (46%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L ISI V +L+DNGS++N+ AT +
Sbjct: 471 IVFSDDDLPPEGSGHTRPLYISIGCSGRRVPSVLLDNGSALNVCLLATAIALEYAPSDFG 530
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + +T F V++ + +N++LGR WIH+ A+P
Sbjct: 531 PSTQTVRAYDSTRREVMGTLEIELLIGPSTFITIFQVLRIPTSFNLLLGRPWIHQAGAIP 590
Query: 170 STCHQ 174
S+ HQ
Sbjct: 591 SSLHQ 595
>gi|108708300|gb|ABF96095.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 719
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIV 122
P +V+ I N V R+LID GSS+N+L +T++ M + + ++ +QP G++
Sbjct: 256 PGRYPIVVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPRSELTPTDQPFHGITPQS 315
Query: 123 TNSD-GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLC 177
++ G ITL V ++ + T+ F V + + YN I+GR + K A +QVL
Sbjct: 316 SSKPMGKITLHVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFMAASHYAYQVLK 375
Query: 178 YQTIYGIEEIRGDQATAWAC 197
G I+G+ A C
Sbjct: 376 MPGPKGTITIQGNAKLAVQC 395
>gi|34761721|gb|AAQ82033.1| gag/pol polyprotein [Pisum sativum]
Length = 1814
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
V F DL H+ AL I+++ ++ +L+D GSS+N+L ++K+ +E +
Sbjct: 813 VGFTNLDLTPEGRNHNKALHITMECKGAVLSHVLVDTGSSLNVLPKQILKKIDVEGFVLT 872
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
+ + G + G +TL V F V+ Y+ +LGR WIH AV
Sbjct: 873 PSDLIVRAFDGSKRSVCGEVTLPVKIGPEVFDIIFYVMDIQPAYSCLLGRPWIHAAGAVS 932
Query: 170 STCHQVLCY------QTIYGIEEI 187
ST HQ L Y T+ G EEI
Sbjct: 933 STLHQKLKYVWNGQIVTVCGEEEI 956
>gi|224097044|ref|XP_002334646.1| predicted protein [Populus trichocarpa]
gi|222873876|gb|EEF11007.1| predicted protein [Populus trichocarpa]
Length = 572
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 16/131 (12%)
Query: 48 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDK 107
+E+SF +D L ++ +L I + ++ RIL+D+GS+VNIL T++++ + D+
Sbjct: 408 TEISFNNEDSLLGSKLYNQSLFIKGYVDEKMMNRILVDDGSAVNILPLKTMKELGIPIDE 467
Query: 108 IKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRA 167
LF + I L + + F V+ A + YN++LGR WIH+
Sbjct: 468 --LFSRK--------------IRLAIHMEDMKFNAFFHVIDAKTTYNMLLGRPWIHENGI 511
Query: 168 VPSTCHQVLCY 178
+ ST HQ Y
Sbjct: 512 ISSTLHQCFKY 522
>gi|62701758|gb|AAX92831.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1497
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H I+ + + ++++D G++VN++ A K+ R +D IK L G
Sbjct: 509 HLKPFYINGYVNGKPMSKMIVDGGAAVNLMPYAMFRKLGRNVEDLIKT-NMVLKDFGGNP 567
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
+ + GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 568 SETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCLIQWQGD 627
Query: 183 GIEEIRGDQATAWACAVLALKE 204
E + D++ A LAL E
Sbjct: 628 KREIVPADRSVNVASFDLALWE 649
>gi|147798270|emb|CAN76859.1| hypothetical protein VITISV_001665 [Vitis vinifera]
Length = 522
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++ ++IG+ V+RIL+D GSS +++ + + M + +
Sbjct: 379 FPPVDPTRTLQPHRDALILFLEIGDFDVRRILVDLGSSADLMQASVISHM---GNSLTGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYN 154
E P L G +G+ T G I L V A +L F VV+ SP+N
Sbjct: 436 ENPGRILSGFNGLSTTLLGDIVLPVQAGPVTLNVQFSVVQDLSPFN 481
>gi|110288780|gb|ABG65975.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1565
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 4/123 (3%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + PH D LVIS +I V+RIL+D GSS +++ KM L +
Sbjct: 528 ISFGPEDAEGVIFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALT 587
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
L G S G LL+ S + F VV YN I GR ++K
Sbjct: 588 PAPASLRGFSREAVQVLGQTLLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKF 647
Query: 166 RAV 168
A+
Sbjct: 648 EAI 650
>gi|356519836|ref|XP_003528575.1| PREDICTED: uncharacterized protein LOC100807419 [Glycine max]
Length = 2270
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 73/147 (49%)
Query: 46 SLSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQ 105
+ + +SF ++L H+ AL IS+ + + +L+D GSS+N++ +T++++ +
Sbjct: 826 ACNNLSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLSYQG 885
Query: 106 DKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKM 165
++ + G + G + L + + F V+ + Y+ +LGR WIH+
Sbjct: 886 PPMRRSGVVVKAFDGSRKSVIGEVDLPITIGPFVFQITFQVMDIQAAYSCLLGRPWIHEA 945
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQA 192
AV ST HQ L + + + G++A
Sbjct: 946 GAVTSTLHQKLKFVRNGSLITVSGEEA 972
>gi|34015095|gb|AAQ56293.1| putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 1311
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Query: 40 NHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVN 91
N P + SE++ +K +S H D LV+ + + N ++R LID GS++N
Sbjct: 276 NTPQYLRWSEIA-----IKFDRSDHPDRVVHPGRYPLVLDLVVRNVKLRRTLIDGGSALN 330
Query: 92 ILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLV 146
IL T++ M++ + ++K P G + G+ G ITL V + T+ F V
Sbjct: 331 ILFAKTLDDMQIPRTELKPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENVCFEV 390
Query: 147 VKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
+ Y+ ILGR + K AVP + ++ G+ +R D A C
Sbjct: 391 ADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPRGVISLRSDIKQAVTC 441
>gi|356506842|ref|XP_003522184.1| PREDICTED: uncharacterized protein LOC100786848 [Glycine max]
Length = 2243
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 75/153 (49%), Gaps = 16/153 (10%)
Query: 48 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDK 107
+ +SF ++L H+ AL IS+ + + +L+D GSS+N++ +T++++
Sbjct: 833 NNLSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQL------ 886
Query: 108 IKLFEQPLIGLSGIVTNSD--------GVITLLVIAKSYSLLTDFLVVKATSPYNVILGR 159
++ P + SG+V + G + L + + F V+ + Y+ +LGR
Sbjct: 887 --FYQGPPMRRSGVVVKAFDGSRKSVIGEVDLPITIGPFVFQITFQVMDIQAAYSCLLGR 944
Query: 160 QWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQA 192
WIH+ AV ST HQ L + + + G++A
Sbjct: 945 PWIHEAGAVTSTLHQKLKFVRNGRLITVSGEEA 977
>gi|38344341|emb|CAD40163.2| OSJNBa0061A09.2 [Oryza sativa Japonica Group]
gi|38346853|emb|CAD39935.2| OSJNBa0091C12.13 [Oryza sativa Japonica Group]
Length = 637
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Query: 55 QDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQ 113
+ L+ ++ H L ++ + + ++++D G++VN++ AT K+ R +D IK
Sbjct: 84 EKLEGTENRHLKPLYVNGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKT-NM 142
Query: 114 PLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCH 173
L G + + GV+ + + S ++ T F V+ Y+++LGR WI +PST H
Sbjct: 143 VLKDYGGNPSETKGVLNVELTVSSKTIPTTFFVIDGKGSYSLLLGRDWIDANCCIPSTMH 202
Query: 174 QVL 176
Q L
Sbjct: 203 QCL 205
>gi|49328062|gb|AAT58762.1| putative polyprotein [Oryza sativa Japonica Group]
gi|49328085|gb|AAT58784.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1178
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V R+LID GSS+N+L +T++ M + Q K+ +QP G++ ++
Sbjct: 439 IVVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPQSKLTPTDQPFHGITPQSSSRPL 498
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V ++ + T+ F V + + YN I+GR + K A +QVL
Sbjct: 499 GKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFMAASHYAYQVLKMPGPK 558
Query: 183 GIEEIRGDQATAWACAVLALKETKRKDS 210
I I+G+ C +L K+ S
Sbjct: 559 RIITIQGNAKLEVQCDKRSLDMVKQTPS 586
>gi|356551859|ref|XP_003544290.1| PREDICTED: uncharacterized protein LOC100815788 [Glycine max]
Length = 2270
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 75/153 (49%), Gaps = 16/153 (10%)
Query: 48 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDK 107
+ +SF ++L H+ AL IS+ + + +L+D GSS+N++ +T++++
Sbjct: 828 NNLSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQL------ 881
Query: 108 IKLFEQPLIGLSGIVTNSD--------GVITLLVIAKSYSLLTDFLVVKATSPYNVILGR 159
++ P + SG+V + G + L + + F V+ + Y+ +LGR
Sbjct: 882 --FYQGPPMRRSGVVVKAFDGSRKSVIGEVDLPITIGPFVFQITFQVMDIQAAYSCLLGR 939
Query: 160 QWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQA 192
WIH+ AV ST HQ L + + + G++A
Sbjct: 940 PWIHEAGAVTSTLHQKLKFVRNGRLITVSGEEA 972
>gi|19920077|gb|AAM08509.1|AC068654_11 Putative retroelement [Oryza sativa Japonica Group]
Length = 2058
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D G+++N++ AT K+ R +D IK L G
Sbjct: 1082 HLKPLYINDYVNGKPMSKMMVDGGAALNLMLYATFRKLGRNAEDLIKT-NMVLKDFGGNP 1140
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + GV+ + + ++ T F V+ Y+++LGR W+H +PST HQ L
Sbjct: 1141 SETKGVLNVELTVGGKTIPTTFFVIDGKGSYSLLLGRDWVHANCCIPSTMHQCL 1194
>gi|62733846|gb|AAX95955.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550301|gb|ABA93098.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1731
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 665 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRSLIDGGSALNILFAKTLDDMQIPRTEL 724
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V PY+ ILGR +
Sbjct: 725 KPSNAPFHGVIPGLSAMPLGQITLPVTFGTRENFRTENVCFEVADFEKPYHAILGRPALA 784
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ + G+ +R D A C
Sbjct: 785 KFMAVPHYTYMMMKMPSPRGVISLRSDIKQAITC 818
>gi|359474674|ref|XP_003631510.1| PREDICTED: uncharacterized protein LOC100243172 [Vitis vinifera]
Length = 2076
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 58/125 (46%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 753 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 812
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR WIH++ A+P
Sbjct: 813 PTTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRVGAIP 872
Query: 170 STCHQ 174
S+ HQ
Sbjct: 873 SSLHQ 877
>gi|28273421|gb|AAO38507.1| putative GAG-POL precursor [Oryza sativa Japonica Group]
Length = 831
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V R+LID GSS+N+L T++ M + + ++ +QP G++ ++
Sbjct: 637 IVVEPTIRNIKVTRVLIDGGSSINLLFAITLDAMGIPRSELTPTDQPFHGITPQSSSKPL 696
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V ++ + T+ F V + + YN I+GR + K A +QVL +
Sbjct: 697 GKITLPVTFGQANNFRTEQITFDVAEFNTTYNAIIGRTALAKFMAASHYAYQVLKMPGLK 756
Query: 183 GIEEIRGDQATAWAC 197
G I+G+ A C
Sbjct: 757 GTITIQGNAKLAVQC 771
>gi|62732811|gb|AAX94930.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|77550198|gb|ABA92995.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1765
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 18/171 (10%)
Query: 40 NHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVN 91
N P + SE++ +K +S H D LV+ + N ++R LID+GS++N
Sbjct: 628 NTPQYLRWSEIA-----IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDSGSALN 682
Query: 92 ILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLV 146
IL T++ M++ + ++K P G + G++ G ITL V + T+ F V
Sbjct: 683 ILFAKTLDDMQIPRTELKPSNAPFHGVIPGLLATPLGQITLPVTFGTRENFRTENVCFEV 742
Query: 147 VKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
+ Y+ ILGR + K AVP + ++ G+ +R D A C
Sbjct: 743 ADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPRGVISLRSDIKQAVTC 793
>gi|21671971|gb|AAM74333.1|AC114474_25 Hypothetical protein similar to putative retroelements [Oryza
sativa Japonica Group]
Length = 597
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 13/153 (8%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + PH D LVIS +I V RIL+D GSS +++ KMRL +
Sbjct: 398 ISFGPEDAEGVMFPHQDPLVISAEIAGFEVLRILVDGGSSADVIFAEAYAKMRLPTQALT 457
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
L + I VI Y+ YN I GR ++K A+
Sbjct: 458 PAPASLRAFGSGENRREEQILFDVIDIPYN-------------YNAIFGRATLNKFEAIS 504
Query: 170 STCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
+ L G+ ++G Q +A + LA+
Sbjct: 505 HHNYLKLKMPGPKGVIVVKGLQPSAASKGNLAI 537
>gi|108710522|gb|ABF98317.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1375
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V R+LID GSS+N+L T++ M + + ++ +QP G++ ++
Sbjct: 637 IVVEPTIRNIKVTRVLIDGGSSINLLFAITLDAMGIPRSELTPTDQPFHGITPQSSSKPL 696
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V ++ + T+ F V + + YN I+GR + K A +QVL +
Sbjct: 697 GKITLPVTFGQANNFRTEQITFDVAEFNTTYNAIIGRTALAKFMAASHYAYQVLKMPGLK 756
Query: 183 GIEEIRGDQATAWAC 197
G I+G+ A C
Sbjct: 757 GTITIQGNAKLAVQC 771
>gi|38344685|emb|CAD40251.2| OSJNBb0096E05.7 [Oryza sativa Japonica Group]
Length = 1271
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIVTNSD 126
L I+ + + ++++D ++VN++ AT K+ R +D IK L G + +
Sbjct: 443 LYINGYVNGKPMSKMMVDGEAAVNLMPYATFRKLGRNAEDFIKT-NMMLKDFGGNPSETK 501
Query: 127 GVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
GV+ + + S ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 502 GVLNVELTVDSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 551
>gi|147773282|emb|CAN69296.1| hypothetical protein VITISV_019593 [Vitis vinifera]
Length = 446
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
T S G I L V +L F VV+ SP+N+ILGR W+H M+ +P T HQ++ + T
Sbjct: 371 TTSLGDIVLPVQVGLVTLNVQFSVVQYLSPFNIILGRTWLHYMKVIPFTYHQMVSFLTKD 430
Query: 183 GIEEIRGDQATAWAC 197
G ++ G Q A C
Sbjct: 431 GQVDLYGSQLAARQC 445
>gi|50897345|gb|AAT85796.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108709086|gb|ABF96881.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 712
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 54 PQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQ 113
P +++ P LV+ + + N ++R LID+GS++NIL T++ M++ + ++K
Sbjct: 525 PWHDRIMVHPGRYPLVLDLVVHNVKLRRTLIDDGSALNILFAKTLDDMQIPRTELKPSNA 584
Query: 114 PLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAV 168
P G + G+ G ITL V + T+ F V + Y+ ILGR + K AV
Sbjct: 585 PFHGVIPGLSATPLGQITLPVTFGTRENFRTENVCFEVADFETAYHAILGRPALAKFMAV 644
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
P + ++ G+ +R D A C
Sbjct: 645 PHYTYMMMKMPGPRGVISLRSDIKQAVTC 673
>gi|32488767|emb|CAE04320.1| OSJNBb0016D16.11 [Oryza sativa Japonica Group]
Length = 1748
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + K+
Sbjct: 759 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSKL 818
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 819 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVTDFETAYHAILGRPALA 878
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 879 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 912
>gi|147768722|emb|CAN62676.1| hypothetical protein VITISV_002828 [Vitis vinifera]
Length = 1762
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 58/125 (46%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H +L IS+ V +L+DNGS++N+ AT +
Sbjct: 152 IVFSDDDLPQEGSDHTRSLYISVGCSGRRVPFVLLDNGSALNVCPLATAIALGYAPSDFG 211
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR WIH+ A+P
Sbjct: 212 PSTQTIRAYDSTRREVMGTLEIELLIGPTTFVAVFQVLRIPTSFNLLLGRPWIHRAEAIP 271
Query: 170 STCHQ 174
S+ HQ
Sbjct: 272 SSLHQ 276
>gi|147814908|emb|CAN68066.1| hypothetical protein VITISV_035817 [Vitis vinifera]
Length = 511
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 61/122 (50%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D I PH BAL++S++IG+ V+RIL+D GSS++++ + + M +K
Sbjct: 386 FPPVDPTRILQPHRBALILSLEIGDFDVRRILVDPGSSIDLVQASVISHMGRNLTGLKNP 445
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ L G + T S G I L V A +L F V+ A Y + + + +P +
Sbjct: 446 GRILSGFNEXSTTSLGDIVLSVQAGPVTLNVQFSVLAARQCYQIAXEVGTSQEDKPLPES 505
Query: 172 CH 173
H
Sbjct: 506 TH 507
>gi|356522885|ref|XP_003530073.1| PREDICTED: uncharacterized protein LOC100789592 [Glycine max]
Length = 2315
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 71/145 (48%)
Query: 48 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDK 107
+ +SF ++L H+ AL IS+ + + +L+D GSS+N++ +T++++
Sbjct: 873 NNLSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLSYRGPP 932
Query: 108 IKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRA 167
++ + G + G + L V + F V+ + Y+ +LGR WIH+ A
Sbjct: 933 MRRSGVVVKAFDGSRKSVIGEVDLPVTIGPFVFQITFQVMDIQAAYSCLLGRPWIHEAGA 992
Query: 168 VPSTCHQVLCYQTIYGIEEIRGDQA 192
V ST HQ L + + + G++A
Sbjct: 993 VTSTLHQKLKFVRNGKLITVSGEEA 1017
>gi|116309190|emb|CAH66285.1| OSIGBa0161P06.2 [Oryza sativa Indica Group]
Length = 1987
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 755 IKFDRSDHPDRVVHPGRYPLVLDLVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 814
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 815 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 874
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 875 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 908
>gi|356570351|ref|XP_003553353.1| PREDICTED: uncharacterized protein LOC100790215 [Glycine max]
Length = 2317
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 72/147 (48%)
Query: 46 SLSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQ 105
+ + +SF ++L H+ AL IS+ + + +L+D GSS+N++ +T++++
Sbjct: 873 AYNNLSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLSYRG 932
Query: 106 DKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKM 165
++ + G + G + L + + F V+ + Y+ +LGR WIH+
Sbjct: 933 PPMRRSGVVVKAFDGSRKSVIGEVDLPITIGPFVFQITFQVMDIQAAYSCLLGRPWIHEA 992
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQA 192
AV ST HQ L + + + G++A
Sbjct: 993 GAVTSTLHQKLKFVRNGSLITVSGEEA 1019
>gi|356561241|ref|XP_003548891.1| PREDICTED: uncharacterized protein LOC100803738 [Glycine max]
Length = 2190
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 72/145 (49%)
Query: 48 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDK 107
+ +SF ++L H+ AL IS+ + + +L+D GSS+N++ +T++++ +
Sbjct: 748 NNLSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLSYQGPP 807
Query: 108 IKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRA 167
++ + G + G + L + + F V+ + Y+ +LGR WIH+ A
Sbjct: 808 MRRSGVVVKAFDGSRKSVIGEVDLPITIGPFVFQITFQVMDIQAAYSCLLGRPWIHEAGA 867
Query: 168 VPSTCHQVLCYQTIYGIEEIRGDQA 192
V ST HQ L + + + G++A
Sbjct: 868 VTSTLHQKLKFVRNGRLITVSGEEA 892
>gi|356551968|ref|XP_003544344.1| PREDICTED: uncharacterized protein LOC100804218 [Glycine max]
Length = 2290
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 71/145 (48%)
Query: 48 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDK 107
+ +SF ++L H+ AL IS+ + + +L+D GSS+N++ +T++++
Sbjct: 848 NNLSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLSYRGPP 907
Query: 108 IKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRA 167
++ + G + G + L V + F V+ + Y+ +LGR WIH+ A
Sbjct: 908 MRRSGVVVKAFDGSRKSVIGEVDLPVTIGPFVFQITFQVMDIQAAYSCLLGRPWIHEAGA 967
Query: 168 VPSTCHQVLCYQTIYGIEEIRGDQA 192
V ST HQ L + + + G++A
Sbjct: 968 VTSTLHQKLKFVRNGKLITVSGEEA 992
>gi|284434716|gb|ADB85414.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1429
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 79 VKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGL-SGIVTNSDGVITLLV-IAK 136
V R+L+D GSS+NIL +E+M++ K+K + P G+ G G ++L V +
Sbjct: 660 VNRVLVDGGSSLNILFAGALEEMQVPMSKVKPVKYPFHGIVPGSTAKPIGQVSLPVTFGR 719
Query: 137 SYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQAT 193
+ T+ F VV S Y+ ILG+ + K +Q L G+ IRGDQ
Sbjct: 720 PDNFRTEKIPFDVVNLESAYSGILGQSALAKFLIATHYGYQSLKMPGPKGVITIRGDQKM 779
Query: 194 AWAC 197
A+ C
Sbjct: 780 AYVC 783
>gi|77550989|gb|ABA93786.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1498
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 5/140 (3%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG-LSGI 121
P LV+ + + N ++R LID GS++NIL T++ M++ + ++K P + G+
Sbjct: 633 PGRYPLVLDLVVRNVKLQRTLIDGGSALNILFAKTLDDMQIPRTELKPSNAPFHSVIPGL 692
Query: 122 VTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLC 177
G ITLLV S T+ F V + Y+ ILGR + K AVP + ++
Sbjct: 693 SATPLGQITLLVTFGTRESFRTENVCFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 752
Query: 178 YQTIYGIEEIRGDQATAWAC 197
G+ +R D A C
Sbjct: 753 MPGPRGVISLRSDIKQAVTC 772
>gi|19881664|gb|AAM01065.1|AC092748_3 Putative retroelement [Oryza sativa Japonica Group]
Length = 1174
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 79 VKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKS 137
+ ++++D G++V+++ AT +K+ R +D IK L G + + GV+ + + S
Sbjct: 416 MSKMMVDGGATVHLMQYATFKKLGRNAKDLIKT-NMVLKDFGGNPSENKGVLNVELTIGS 474
Query: 138 YSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
++ T F V+ Y+++LGR WIH +PST HQ +
Sbjct: 475 KTVPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCM 513
>gi|147841472|emb|CAN62100.1| hypothetical protein VITISV_033308 [Vitis vinifera]
Length = 498
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D I PH DAL++S++IG+ V+ IL+D GSS +++ + V M ++
Sbjct: 349 FPPVDPTRILQPHRDALIMSLEIGDFDVRCILVDPGSSADLVQASVVSHMGHNLTGLENP 408
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNV 155
+ L +G T S G I L + A +L F VV+ SP+NV
Sbjct: 409 GRILSEFNGSSTTSLGDIILPIQAGPVTLNVQFSVVQDLSPFNV 452
>gi|38346866|emb|CAE02216.2| OSJNBb0002N06.6 [Oryza sativa Japonica Group]
gi|116309528|emb|CAH66592.1| OSIGBa0092G14.3 [Oryza sativa Indica Group]
Length = 1607
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 68/157 (43%), Gaps = 4/157 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + H D LVIS +I V+RIL+D GSS +++ KM L
Sbjct: 675 ISFGPEDAEGVMFLHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQAFT 734
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
L L G G LL+ S + F VV YN I GR ++K
Sbjct: 735 LAPASLRGFGGETVQVLSQALLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKF 794
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
A+ + L G+ ++G Q +A + LA+
Sbjct: 795 EAISHHNYLKLKMPGPIGVIVVKGLQPSAASKGDLAI 831
>gi|147810276|emb|CAN64705.1| hypothetical protein VITISV_029007 [Vitis vinifera]
Length = 604
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%)
Query: 100 KMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGR 159
KM+L ++ + L G G T I L ++ +L+ FLV K PYN ILG+
Sbjct: 126 KMKLPMTTLESLGRALKGFKGSTTIFLCDIILSMVVGLVTLMAQFLVFKDPFPYNTILGQ 185
Query: 160 QWIHKMRAVPSTCHQ 174
WI+KM+AVPST HQ
Sbjct: 186 AWINKMKAVPSTYHQ 200
>gi|356519007|ref|XP_003528166.1| PREDICTED: uncharacterized protein LOC100792217 [Glycine max]
Length = 2265
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 71/145 (48%)
Query: 48 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDK 107
+ +SF ++L H+ AL IS+ + + +L+D GSS+N++ +T++++
Sbjct: 823 NNLSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLSYRGPP 882
Query: 108 IKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRA 167
++ + G + G + L V + F V+ + Y+ +LGR WIH+ A
Sbjct: 883 MRRSGVVVKAFDGSRKSVIGEVDLPVTIGPFVFQITFQVMDIQAAYSCLLGRPWIHEAGA 942
Query: 168 VPSTCHQVLCYQTIYGIEEIRGDQA 192
V ST HQ L + + + G++A
Sbjct: 943 VTSTLHQKLKFVRNGKLITVSGEEA 967
>gi|147781249|emb|CAN74038.1| hypothetical protein VITISV_028523 [Vitis vinifera]
Length = 2317
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V I++DNGS++N+ AT +
Sbjct: 706 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSIILDNGSALNVCHLATAIALGYAPSDFG 765
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR WIHK A+P
Sbjct: 766 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHKAGAIP 825
Query: 170 STCHQ 174
S+ HQ
Sbjct: 826 SSLHQ 830
>gi|147852075|emb|CAN80167.1| hypothetical protein VITISV_018430 [Vitis vinifera]
Length = 94
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%)
Query: 115 LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
L G + T S G I L V A +L F VV+ SP+N ILG W+ M+A+PST HQ
Sbjct: 15 LSGFNEASTTSLGDIVLPVQADPVTLNVQFSVVENLSPFNDILGHTWLDGMKAIPSTYHQ 74
Query: 175 VLCYQTIYGIEEIRGDQATA 194
++ Y T G ++ G Q A
Sbjct: 75 MVSYLTEDGQIDLYGSQLVA 94
>gi|21672089|gb|AAM74451.1|AC124213_9 Putative retroelement [Oryza sativa Japonica Group]
gi|78708454|gb|ABB47429.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1077
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 79 VKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKS 137
+ ++++D G++V+++ AT +K+ R +D IK L G + + GV+ + + S
Sbjct: 319 MSKMMVDGGATVHLMQYATFKKLGRNAKDLIKT-NMVLKDFGGNPSENKGVLNVELTIGS 377
Query: 138 YSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
++ T F V+ Y+++LGR WIH +PST HQ +
Sbjct: 378 KTVPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCM 416
>gi|62733054|gb|AAX95171.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group]
gi|77549581|gb|ABA92378.1| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
[Oryza sativa Japonica Group]
Length = 2041
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 70/135 (51%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V R+LI+ GSS+N+L +T++ M + + ++ +QP G++ ++
Sbjct: 1133 IVVEPTIRNIKVARVLINGGSSINLLFASTLDAMGIPRSELTPTDQPFHGITPQSSSKPL 1192
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V ++ + T+ F V + + YN I+GR + K A +QVL +
Sbjct: 1193 GKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFMAASHYAYQVLKMPGLK 1252
Query: 183 GIEEIRGDQATAWAC 197
G I+G+ A C
Sbjct: 1253 GTITIQGNAKLAVQC 1267
>gi|356573867|ref|XP_003555077.1| PREDICTED: uncharacterized protein LOC100811111 [Glycine max]
Length = 2265
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 71/145 (48%)
Query: 48 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDK 107
+ +SF ++L H+ AL IS+ + + +L+D GSS+N++ +T++++
Sbjct: 823 NNLSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLSYRGPP 882
Query: 108 IKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRA 167
++ + G + G + L + + F V+ + Y+ +LGR WIH+ A
Sbjct: 883 MRRSGVVVKAFDGSRKSVIGEVDLPITIGPFVFQITFQVMDIQAAYSCLLGRPWIHEAGA 942
Query: 168 VPSTCHQVLCYQTIYGIEEIRGDQA 192
V ST HQ L + + + G++A
Sbjct: 943 VTSTLHQKLKFVRNGSLITVSGEEA 967
>gi|224091749|ref|XP_002309340.1| predicted protein [Populus trichocarpa]
gi|222855316|gb|EEE92863.1| predicted protein [Populus trichocarpa]
Length = 411
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 63 PHDDALVISIKIGNCLVKR------ILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLI 116
P+ AL+ I I + + +L+D+G++VNIL + +M + K+ + L+
Sbjct: 180 PNKTALLEEIPIPRGIRRNQPGNVWVLVDDGTTVNILFAEVMVQMGIPSSKLTPVKTFLV 239
Query: 117 GLSGIVTNSDGVITLLVIAKSYS----LLTDFLVVKATSPYNVILGRQWIHKMRAVPSTC 172
G+ G G + L ++ + S L F+V+ YN ILGR +H++ A+ ST
Sbjct: 240 GIEGPGVLVKGALKLPIVMGTSSKCVLLQQSFMVIYMALAYNAILGRPLLHQINAIISTR 299
Query: 173 HQVLCYQTIYGIEEIRGDQATAWACAVLALKETKRKDSNFE 213
+ L + T G + GDQ + A LK K + E
Sbjct: 300 YLALKFPTQKG-ATVSGDQTISRQFATTCLKGKKERAEAVE 339
>gi|27764661|gb|AAO23086.1| putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 971
Score = 56.6 bits (135), Expect = 7e-06, Method: Composition-based stats.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 4/157 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + PH D LVIS +I V RIL+D GSS +++ KM L +
Sbjct: 715 ISFGPEDAEGVMFPHQDPLVISAEIAGFEVWRILVDGGSSADVIFVEAYAKMGLPTQALT 774
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
+ G G G LL+ S + F VV YN ILGR ++K
Sbjct: 775 PAPASIRGFGGEAVQVLGQALLLIAFGSGENRREEQVLFDVVDIPYNYNAILGRATLNKF 834
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
A+ + L G+ ++G Q++A + LA+
Sbjct: 835 EAISHHNYLKLKMPGPAGVIVVKGLQSSAASKGDLAI 871
>gi|50511475|gb|AAT77397.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1194
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V R+LID GSS+N+L +T++ M + Q ++ +QP G++ ++
Sbjct: 788 IVVEPTIRNFKVARVLIDGGSSINLLFASTLDTMGIPQSELTPTDQPFHGITPQSSSRPL 847
Query: 127 GVITL-LVIAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L + ++ + T+ F V + + YN I+GR + K A +QVL
Sbjct: 848 GKIMLPMTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFMAASHYAYQVLKMPGPK 907
Query: 183 GIEEIRGDQATAWACAVLAL 202
G I+G+ A C +L
Sbjct: 908 GTITIQGNTKLAVQCDKRSL 927
>gi|54291771|gb|AAV32140.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIV 122
P +V+ I N V R+L+D GSS+N+L +T++ M + + ++ +QP G++
Sbjct: 254 PGRYPIVVEPTIRNIKVARVLVDRGSSINLLFASTLDAMGIPRSELTPTDQPFHGITPQS 313
Query: 123 TNSD-GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLC 177
++ G ITL V ++ + T+ F V + + YN I+GR + K A +QVL
Sbjct: 314 SSKPLGKITLPVTFGRASNFRTEQITFDVAEFDTAYNAIIGRTALAKFMAASHYAYQVLK 373
Query: 178 YQTIYGIEEIRGDQATAWAC 197
G I+G+ A C
Sbjct: 374 MPGPKGTITIQGNAKLAVQC 393
>gi|50511459|gb|AAT77381.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1672
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIV 122
P +V+ I N V R+L+D GSS+N+L +T++ M + + ++ +QP G++
Sbjct: 546 PGRYPIVVEPTIRNIKVARVLVDRGSSINLLFASTLDAMGIPRSELTPTDQPFHGITPQS 605
Query: 123 TNSD-GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLC 177
++ G ITL V ++ + T+ F V + + YN I+GR + K A +QVL
Sbjct: 606 SSKPLGKITLPVTFGRASNFRTEQITFDVAEFDTAYNAIIGRTALAKFMAASHYAYQVLK 665
Query: 178 YQTIYGIEEIRGDQATAWAC 197
G I+G+ A C
Sbjct: 666 MPGPKGTITIQGNAKLAVQC 685
>gi|38346966|emb|CAE02263.2| OSJNBb0049I21.2 [Oryza sativa Japonica Group]
Length = 1843
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 760 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 819
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 820 KPSNTPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 879
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ + G+ +R D A C
Sbjct: 880 KFMAVPHYTYMMMKMPGLRGVLTLRSDIKQAVTC 913
>gi|356560472|ref|XP_003548516.1| PREDICTED: uncharacterized protein LOC100811554 [Glycine max]
Length = 1998
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 16/153 (10%)
Query: 48 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDK 107
+ +SF ++L H+ AL IS+ + + +L+D GSS+N++ +T++++
Sbjct: 894 NNLSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLS----- 948
Query: 108 IKLFEQPLIGLSGIVTNSD--------GVITLLVIAKSYSLLTDFLVVKATSPYNVILGR 159
+ P + SG+V + G + L V + F V+ + Y+ +LGR
Sbjct: 949 ---YRGPPMRRSGVVVKAFDGSRKSVIGEVDLPVTIGPFVFQITFQVMDIQAAYSCLLGR 1005
Query: 160 QWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQA 192
WIH+ AV ST HQ L + + + G++A
Sbjct: 1006 PWIHEAGAVTSTLHQKLKFVRNGKLITVSGEEA 1038
>gi|77554529|gb|ABA97325.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 236
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIV 122
P +V+ I N V R+LID GSS+N+L +T++ M + + ++ +QP G++
Sbjct: 37 PGRYPIVVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPRSELTPTDQPFHGITPQS 96
Query: 123 TNSD-GVITL-LVIAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLC 177
++ G ITL + ++ + T+ F V K + YN I+GR + K A +QVL
Sbjct: 97 SSKPMGKITLPMTFGQANNFRTEQITFDVAKFDTAYNAIIGRTALVKFMAASHYAYQVLK 156
Query: 178 YQTIYGIEEIRGDQATAWAC 197
G I+G+ A C
Sbjct: 157 MPGPKGTIIIQGNAKRAVQC 176
>gi|356524006|ref|XP_003530624.1| PREDICTED: uncharacterized protein LOC100785887 [Glycine max]
Length = 2320
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 71/145 (48%)
Query: 48 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDK 107
+ +SF ++L H+ AL IS+ + + +L+D GSS+N++ +T++++
Sbjct: 878 NNLSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLSYRGPP 937
Query: 108 IKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRA 167
++ + G + G + L + + F V+ + Y+ +LGR WIH+ A
Sbjct: 938 MRRSGVVVKAFDGSRKSVIGEVDLPITIGPFVFQITFQVMDIQAAYSCLLGRPWIHEAGA 997
Query: 168 VPSTCHQVLCYQTIYGIEEIRGDQA 192
V ST HQ L + + + G++A
Sbjct: 998 VTSTLHQKLKFVRNGKLITVSGEEA 1022
>gi|19225035|gb|AAL86511.1|AC099040_15 putative polyprotein [Oryza sativa Japonica Group]
Length = 1722
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 4/157 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F P+D + + PH D LVIS +I V+RIL+D GSS +++ KM L +
Sbjct: 518 IYFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLTSQALT 577
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
L G G G LL+ S + F VV YN I GR ++
Sbjct: 578 PAPASLRGFGGEAVQVLGQALLLIAFGSGENRREEQVLFDVVDIPYNYNTIFGRATLNMF 637
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
+ + L G+ ++G Q +A + LA+
Sbjct: 638 EVISHHNYLELKMPGPTGVIVVKGLQPSAASKGDLAI 674
>gi|110288815|gb|AAP52706.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1735
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 4/157 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F P+D + + PH D LVIS +I V+RIL+D GSS +++ KM L +
Sbjct: 531 IYFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLTSQALT 590
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
L G G G LL+ S + F VV YN I GR ++
Sbjct: 591 PAPASLRGFGGEAVQVLGQALLLIAFGSGENRREEQVLFDVVDIPYNYNTIFGRATLNMF 650
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
+ + L G+ ++G Q +A + LA+
Sbjct: 651 EVISHHNYLELKMPGPTGVIVVKGLQPSAASKGDLAI 687
>gi|147791735|emb|CAN68353.1| hypothetical protein VITISV_022217 [Vitis vinifera]
Length = 2168
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 557 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAFALGYAPSDFG 616
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR WIH+ A+P
Sbjct: 617 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVVVFQVLRIPTSFNLLLGRPWIHRAGAIP 676
Query: 170 STCHQ 174
S+ HQ
Sbjct: 677 SSLHQ 681
>gi|77554860|gb|ABA97656.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 874
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V R+LID GSS+N+L +T++ M + Q ++ +QP G++ ++
Sbjct: 528 IVVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGILQSELTPTDQPFHGITPQSSSRPL 587
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V ++ + T+ F V + + YN I+G+ + K A +QVL
Sbjct: 588 GKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGKTALAKFMAASHYAYQVLKMPGPK 647
Query: 183 GIEEIRGDQATAWAC 197
G I+G+ A C
Sbjct: 648 GTITIQGNAKLAVQC 662
>gi|147818826|emb|CAN60724.1| hypothetical protein VITISV_019060 [Vitis vinifera]
Length = 2004
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 647 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 706
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR WIH+ A+P
Sbjct: 707 PTTQTVRAYDSTRREVMGTLEIELLIGPXTFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 766
Query: 170 STCHQ 174
S+ HQ
Sbjct: 767 SSLHQ 771
>gi|356498995|ref|XP_003518330.1| PREDICTED: uncharacterized protein LOC100818337 [Glycine max]
Length = 2323
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 71/145 (48%)
Query: 48 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDK 107
+ +SF ++L H+ AL IS+ + + +L+D GSS+N++ +T++++
Sbjct: 881 NNLSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLSYRGPP 940
Query: 108 IKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRA 167
++ + G + G + L + + F V+ + Y+ +LGR WIH+ A
Sbjct: 941 MRRSGVVVKAFDGSRKSVIGEVDLPITIGPFVFQITFQVMDIQAAYSCLLGRPWIHEAGA 1000
Query: 168 VPSTCHQVLCYQTIYGIEEIRGDQA 192
V ST HQ L + + + G++A
Sbjct: 1001 VTSTLHQKLKFVRNGKLITVSGEEA 1025
>gi|147775045|emb|CAN59913.1| hypothetical protein VITISV_030726 [Vitis vinifera]
Length = 1957
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%)
Query: 48 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDK 107
+ + F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 573 TXIVFSDDDLPPEGSGHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSD 632
Query: 108 IKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRA 167
Q + G + + ++ + +T F V++ + +N+ LGR WIH+ A
Sbjct: 633 FGPSTQTVRAYDSTRREVMGTLEIELLIGPTTFITIFQVLRIPTSFNLRLGRPWIHRAGA 692
Query: 168 VPSTCHQ 174
+PS+ HQ
Sbjct: 693 IPSSLHQ 699
>gi|359483561|ref|XP_003632976.1| PREDICTED: uncharacterized protein LOC100852629 [Vitis vinifera]
Length = 2289
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 697 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 756
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR WIH+ A+P
Sbjct: 757 PTTQTVRAYDSTRREVMGTLEIELLIDPATFVVVFQVLRIPTSFNLLLGRPWIHRAGAIP 816
Query: 170 STCHQ 174
S+ HQ
Sbjct: 817 SSLHQ 821
>gi|147845704|emb|CAN79906.1| hypothetical protein VITISV_034933 [Vitis vinifera]
Length = 1882
Score = 56.2 bits (134), Expect = 9e-06, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 58/125 (46%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 681 IVFSDDDLPPEGSDHTRPLYISVXCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 740
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ S + + F V++ + +N++LGR WIH+ A+P
Sbjct: 741 PSTQTVRAYDSTRREVMGTLEIELLIGSATFVAIFQVLRIPTSFNLLLGRPWIHRAGAIP 800
Query: 170 STCHQ 174
S+ HQ
Sbjct: 801 SSLHQ 805
>gi|147804834|emb|CAN78057.1| hypothetical protein VITISV_022118 [Vitis vinifera]
Length = 1504
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ FL DL L S L I++ V +L+DNG ++N+ AT +
Sbjct: 277 IVFLDDDLPLEGSDRTHPLYITVGCSGHRVPSVLLDNGLTLNVCPLATAIALGYAPSDFD 336
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + + + T F V++ + +N++LGR WIHK+ A+P
Sbjct: 337 PSTQTIRAYDNTKREVMGTLIVEFLIGPTTFPTLFQVLRIPTSFNLLLGRPWIHKVGAIP 396
Query: 170 STCHQ 174
S+ HQ
Sbjct: 397 SSLHQ 401
>gi|53981175|gb|AAV24815.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1304
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L + + + ++L+D G++VN++ T +K D + + L G T
Sbjct: 534 HFKPLCVKGFVNGKPMSKMLVDGGAAVNLMPYVTFKKSGRSADDLIKTKMVLKDFGGNHT 593
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ GV+ + + S + T F V+ Y+++LGR WIH +PST H L
Sbjct: 594 ETKGVLNVELTVGSKIVPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHHSL 646
>gi|147802357|emb|CAN77127.1| hypothetical protein VITISV_003358 [Vitis vinifera]
Length = 402
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 36/133 (27%)
Query: 71 SIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVIT 130
SI++G+ V+RIL+D GSS ++L A+V+ G +T
Sbjct: 287 SIRMGDFDVRRILVDLGSSTDLLQ-ASVQV--------------------------GPVT 319
Query: 131 LLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGD 190
L V F V++ SP+NVIL W++ M+ +PST HQ++ + T G ++ G
Sbjct: 320 LNV---------QFSVIQDLSPFNVILECTWLYYMKVIPSTYHQMVSFLTEDGQIDLHGS 370
Query: 191 QATAWACAVLALK 203
Q A C +A K
Sbjct: 371 QLPARQCYQIARK 383
>gi|38344494|emb|CAE05173.2| OSJNBa0013A04.10 [Oryza sativa Japonica Group]
Length = 1230
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Query: 40 NHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVN 91
N P + SE++ +K +S H D +LV+ + N ++R LID GS++N
Sbjct: 398 NTPQYLRWSEIA-----IKFDRSDHPDRVVHPGRYSLVLDPVVRNVKLQRTLIDGGSALN 452
Query: 92 ILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLV 146
IL T++ +++ + ++K P G + G+ G ITL V + T+ F V
Sbjct: 453 ILFAKTLDDIQIPRTELKPSNAPFHGVIPGLSATPLGQITLSVTFGTQENFRTEKVCFEV 512
Query: 147 VKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
+ YN ILGR + K AVP + ++ G+ +R D A C
Sbjct: 513 ADFETAYNAILGRPALAKFMAVPHYTYMMMKMPGPRGVISLRSDIKQAVTC 563
>gi|359472600|ref|XP_003631172.1| PREDICTED: uncharacterized protein LOC100852915 [Vitis vinifera]
Length = 2212
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 58/125 (46%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 659 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 718
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ S + + F V++ + +N++LGR WIH+ A+P
Sbjct: 719 PSTQTVRAYDSTRREVMGTLEIELLIGSATFVAIFQVLRIPTSFNLLLGRPWIHRAGAIP 778
Query: 170 STCHQ 174
S+ HQ
Sbjct: 779 SSLHQ 783
>gi|62733720|gb|AAX95830.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|108864305|gb|ABG22462.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 971
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 82 ILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSL 140
+++D G++VN++ A K+ R +D IK L G + + GV+ + + S ++
Sbjct: 1 MIVDGGAAVNLMPYAMFRKLGRNVEDLIKT-NMVLKDFGGNPSETKGVLNVELTVGSKTI 59
Query: 141 LTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVL 200
T F V+ Y+++LGR WIH +PST HQ L E + D++ A L
Sbjct: 60 PTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCLIQWQGDKREIVPADRSVNVASFDL 119
Query: 201 ALKE 204
AL E
Sbjct: 120 ALWE 123
>gi|359475743|ref|XP_003631748.1| PREDICTED: uncharacterized protein LOC100854902 [Vitis vinifera]
Length = 1829
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 58/125 (46%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ + V +L+DNGS++N+ AT +
Sbjct: 285 IVFSDDDLPPEGSGHTRPLYISVGCSSRRVSSVLLDNGSALNVCPLATAIALGYAPSDFG 344
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR WIH+ A+P
Sbjct: 345 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 404
Query: 170 STCHQ 174
S+ HQ
Sbjct: 405 SSLHQ 409
>gi|359497336|ref|XP_003635486.1| PREDICTED: uncharacterized protein LOC100853954, partial [Vitis
vinifera]
Length = 1549
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 86 IVFSDDDLPPEGSGHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 145
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR WIH+ A+P
Sbjct: 146 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 205
Query: 170 STCHQ 174
S+ HQ
Sbjct: 206 SSLHQ 210
>gi|52353363|gb|AAU43931.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 927
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 754 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 813
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 814 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 873
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 874 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 907
>gi|32489969|emb|CAE05586.1| OSJNBa0032N05.14 [Oryza sativa Japonica Group]
Length = 598
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 4/157 (2%)
Query: 49 EVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
++SF P D + + PH D L+I +I V+RIL+D GSS +++ +M L +
Sbjct: 68 QISFGPDDAEGVLFPHQDPLIILAEIVGFEVRRILVDGGSSADVIIAEAYARMGLPTLAL 127
Query: 109 KLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHK 164
L G G G + L V + + F VV YN I GR ++K
Sbjct: 128 TQAPTSLQGFGGEAVQVLGQVQLAVAFGTSDNRREEQILFDVVDIPYNYNTIFGRATLNK 187
Query: 165 MRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLA 201
+A+ + L + G+ ++G Q +A + LA
Sbjct: 188 FKAISHHNYLKLKMPGLAGVIMVKGLQPSATSKGDLA 224
>gi|147790268|emb|CAN74495.1| hypothetical protein VITISV_026191 [Vitis vinifera]
Length = 2172
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%)
Query: 61 QSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSG 120
+S H L IS+ V +L+DNGS++N+ AT + Q +
Sbjct: 599 RSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSBFGPSTQTVRAYDS 658
Query: 121 IVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
G + + ++ + + F V++ + +N++LGR WIH+ A+PS+ HQ
Sbjct: 659 TRREVMGTLEIELLIGPATFVAXFQVLRIPTSFNLLLGRPWIHRAGAIPSSLHQ 712
>gi|46391121|gb|AAS90648.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46485807|gb|AAS98432.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 2000
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 755 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 814
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 815 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVANFETAYHAILGRPALA 874
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 875 KFMAVPHYTYMMMKMSGPRGVLSLRSDIKQAVTC 908
>gi|356570299|ref|XP_003553327.1| PREDICTED: uncharacterized protein LOC100814838 [Glycine max]
Length = 2284
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 18/154 (11%)
Query: 48 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDK 107
+ +SF ++L H+ AL IS+ + + +L+D GSS+N++ +T++++
Sbjct: 842 NNLSFSDEELPEEGRNHNLALHISVNYKSDALSNVLVDTGSSLNVMAKSTLDQL------ 895
Query: 108 IKLFEQPLIGLSGIVTNS-DG--------VITLLVIAKSYSLLTDFLVVKATSPYNVILG 158
++ P + SG+V + DG V + I S +T F V+ + Y+ +LG
Sbjct: 896 --FYQGPPMRRSGVVVKAFDGSRKAVIGEVDLPITIGPSVFQIT-FQVMDIQAAYSCLLG 952
Query: 159 RQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQA 192
R WIH+ AV ST HQ L + + + G++A
Sbjct: 953 RPWIHEAGAVTSTLHQKLKFVRNGRLITVSGEEA 986
>gi|147819827|emb|CAN67305.1| hypothetical protein VITISV_031130 [Vitis vinifera]
Length = 392
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%)
Query: 85 DNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDF 144
++ SS N+L ++M +K L G +G T S G + L + A +L
Sbjct: 169 ESCSSANLLQMLAYKQMDHLTSTLKNPGXLLFGFNGDTTTSLGDVMLPIQADLVTLSMRX 228
Query: 145 LVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
LVV S YN I+GR W+HKM+ +P T HQ+L
Sbjct: 229 LVVDDLSXYNAIMGRAWLHKMKVIPYTYHQML 260
>gi|5902444|dbj|BAA84457.1| GAG-POL precursor [Oryza sativa Japonica Group]
Length = 983
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 18/169 (10%)
Query: 42 PFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNIL 93
P + SE++ +K +S H D LV+ + N ++R LID GS++NIL
Sbjct: 750 PHYLRWSEIA-----IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNIL 804
Query: 94 DDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVK 148
T++ M++ + ++K P G + G+ G ITL V + T+ F V
Sbjct: 805 FAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVAD 864
Query: 149 ATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
+ Y+ ILGR + K AVP + ++ G+ +R D A C
Sbjct: 865 FETAYHAILGRPALAKFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 913
>gi|224117414|ref|XP_002331706.1| predicted protein [Populus trichocarpa]
gi|222874312|gb|EEF11443.1| predicted protein [Populus trichocarpa]
Length = 302
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F P D + I+ PH+DALVIS + V +IL+DN SSVNIL + KM ++ ++
Sbjct: 234 ITFTPTDGQRIEYPHEDALVISPVMEGHRVYKILMDNDSSVNILSTEAMMKMGIDASRMT 293
Query: 110 LFEQPLIGL 118
P IG+
Sbjct: 294 PVPTPFIGI 302
>gi|108706114|gb|ABF93909.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 882
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSD 126
LV+ + N ++R LID GS++NIL T++ M++ + ++K P G + G+
Sbjct: 728 LVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRTELKPSNAPFHGVIPGLSATPL 787
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V + T+ F V + Y+ ILGR + K AVP + ++
Sbjct: 788 GQITLPVTFGTRENFRTENVCFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPR 847
Query: 183 GIEEIRGDQATAWAC 197
G+ +R D A C
Sbjct: 848 GVISLRSDVKQAVTC 862
>gi|110288793|gb|ABG65980.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 975
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 752 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 811
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 812 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 871
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 872 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 905
>gi|77555382|gb|ABA98178.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1271
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 759 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 818
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 819 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 878
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 879 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 912
>gi|77555070|gb|ABA97866.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1760
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 88 SSVNILDDATVE--KMRLEQDKIKLFEQPLI--GLSGIVTNSDGVITLLVIAKSYSLLTD 143
S V + DD + K +L ++ L + ++ G G + + GV+ + + S ++ T
Sbjct: 712 SQVPVADDVAADEAKRKLGRNAEDLIKTNMVLKGFGGNPSETKGVLNVELTVGSKTIPTT 771
Query: 144 FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLALK 203
F V Y+++LGR WIH +PST HQ L IE + D++ A A LAL
Sbjct: 772 FFVSDGKGSYSLLLGRDWIHANCCIPSTMHQCLIQWQGDKIEIVPADRSVNVASADLALW 831
Query: 204 E 204
E
Sbjct: 832 E 832
>gi|46575948|gb|AAT01309.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|51451363|gb|AAU03118.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1149
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 752 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 811
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 812 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 871
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 872 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 905
>gi|19881548|gb|AAM00949.1|AC021892_13 Putative retroelement [Oryza sativa Japonica Group]
gi|31431082|gb|AAP52913.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1945
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 705 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 764
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 765 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 824
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 825 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 858
>gi|77554253|gb|ABA97049.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1399
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 633 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRSLIDGGSALNILFAKTLDDMQIPRTEL 692
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
KL P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 693 KLSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENVCFEVADFETAYHGILGRPALA 752
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 753 KFMAVPHYTYMMMKMPGPRGVISLRSDIKQAITC 786
>gi|147783484|emb|CAN72956.1| hypothetical protein VITISV_002875 [Vitis vinifera]
Length = 1391
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +J+DNGS++N+ AT +
Sbjct: 9 IVFSDDDLPPEGSGHTRPLYISVGCSGRRVPSVJLDNGSALNVCPLATAIALGYAPSDFG 68
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR WIH+ A+P
Sbjct: 69 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 128
Query: 170 STCHQ 174
S+ HQ
Sbjct: 129 SSLHQ 133
>gi|38346695|emb|CAE02180.2| OSJNBa0080E14.11 [Oryza sativa Japonica Group]
Length = 2001
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 759 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 818
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 819 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 878
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 879 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 912
>gi|359489281|ref|XP_003633904.1| PREDICTED: uncharacterized protein LOC100852807 [Vitis vinifera]
Length = 2158
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L I++ V +L+DNGS++N+ AT +
Sbjct: 667 IVFSDDDLPPEGSDHTHPLYITVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 726
Query: 110 LFEQPLIGLSGIVTNSDG--VITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRA 167
Q + G +I L++ ++ +L F V++ + +N++LGR WIHK A
Sbjct: 727 TSTQTVRAYDSTKREVMGTLMIELMIGPTTFPIL--FQVLRIPTSFNLLLGRPWIHKAGA 784
Query: 168 VPSTCHQ 174
+PS+ HQ
Sbjct: 785 IPSSLHQ 791
>gi|22725926|gb|AAN04936.1| Putative retroelement [Oryza sativa Japonica Group]
Length = 1479
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 705 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 764
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 765 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 824
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 825 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 858
>gi|77554831|gb|ABA97627.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 2010
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 752 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 811
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 812 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 871
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 872 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 905
>gi|77555338|gb|ABA98134.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1956
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 759 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 818
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 819 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 878
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 879 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 912
>gi|77552232|gb|ABA95029.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1995
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 759 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 818
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 819 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 878
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 879 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 912
>gi|38344596|emb|CAE05341.2| OSJNBa0079M09.16 [Oryza sativa Japonica Group]
Length = 1601
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 741 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 800
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 801 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 860
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 861 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 894
>gi|32480044|emb|CAE01788.1| OSJNBa0039K24.7 [Oryza sativa Japonica Group]
Length = 1818
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 759 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 818
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 819 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 878
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 879 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 912
>gi|359482754|ref|XP_003632828.1| PREDICTED: uncharacterized protein LOC100852681 [Vitis vinifera]
Length = 1965
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F DL S H L IS+ V +L+DNGS +N+ AT +
Sbjct: 408 FSDDDLPPEGSGHARPLYISVGCSGRRVPSVLLDNGSVLNVCPLATAIALGYAPSDFGPS 467
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
Q + G + + ++ + +T F V++ + +N++LGR WIH+ AVPS+
Sbjct: 468 TQTVRAYDITRREVMGTLEIELLIGPTTFITIFQVLRIPTSFNLLLGRPWIHRAGAVPSS 527
Query: 172 CHQ 174
HQ
Sbjct: 528 LHQ 530
>gi|356561959|ref|XP_003549243.1| PREDICTED: uncharacterized protein LOC100795062 [Glycine max]
Length = 2323
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 70/145 (48%)
Query: 48 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDK 107
+ +SF ++L H+ AL IS+ + + +L+D GSS+N++ +T++++
Sbjct: 881 NNLSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLSYRGPP 940
Query: 108 IKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRA 167
++ + G + G + L + + F V+ + Y+ +LGR WIH A
Sbjct: 941 MRRSGVVVKAFDGSRKSVIGEVDLPITIGPFVFQITFQVMDIQAAYSCLLGRPWIHGAGA 1000
Query: 168 VPSTCHQVLCYQTIYGIEEIRGDQA 192
V ST HQ L + + + G++A
Sbjct: 1001 VTSTLHQKLKFVRNGKLITVSGEEA 1025
>gi|116309081|emb|CAH66189.1| OSIGBa0144J05.1 [Oryza sativa Indica Group]
Length = 1601
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 741 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 800
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 801 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 860
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 861 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 894
>gi|40882693|gb|AAR96234.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708469|gb|ABF96264.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 2004
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 759 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 818
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 819 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 878
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 879 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 912
>gi|38344628|emb|CAE02527.2| OSJNBb0003A12.14 [Oryza sativa Japonica Group]
Length = 1863
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 740 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 799
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 800 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 859
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 860 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 893
>gi|356523173|ref|XP_003530216.1| PREDICTED: uncharacterized protein LOC100814220 [Glycine max]
Length = 2280
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 71/145 (48%)
Query: 48 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDK 107
+ +SF ++L H+ AL IS+ + + +L+D GSS+N++ +T+ ++ +
Sbjct: 838 NNLSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLGQLSYQGPP 897
Query: 108 IKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRA 167
++ + G + G + L + + F V+ + Y+ +LGR WIH+ A
Sbjct: 898 MRRSGVVVKAFDGSRKSVIGEVDLPITIGPFVFQITFQVMDIQAAYSCLLGRPWIHEAGA 957
Query: 168 VPSTCHQVLCYQTIYGIEEIRGDQA 192
V ST HQ L + + + G++A
Sbjct: 958 VTSTLHQKLKFVRNGRLITVSGEEA 982
>gi|116309752|emb|CAH66795.1| H0215F08.6 [Oryza sativa Indica Group]
Length = 1991
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 733 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 792
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 793 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 852
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 853 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 886
>gi|77554274|gb|ABA97070.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1988
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 752 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 811
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 812 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 871
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 872 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 905
>gi|108862820|gb|ABA98926.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1991
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 755 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 814
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 815 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 874
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 875 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 908
>gi|38346188|emb|CAD39529.2| OSJNBa0027O01.4 [Oryza sativa Japonica Group]
Length = 2013
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 755 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 814
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 815 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 874
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 875 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 908
>gi|356524171|ref|XP_003530705.1| PREDICTED: uncharacterized protein LOC100812971 [Glycine max]
Length = 2270
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 70/145 (48%)
Query: 48 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDK 107
+ +SF ++L H+ AL IS+ + + +L+D GSS+N++ +T++++
Sbjct: 828 NNLSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLSYRGPP 887
Query: 108 IKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRA 167
++ + G + G + L + + F V+ + Y+ +LGR WIH A
Sbjct: 888 MRRSGVVVKAFDGSRKSVIGEVDLPITIGPFVFQITFQVMDIQAAYSCLLGRPWIHGAGA 947
Query: 168 VPSTCHQVLCYQTIYGIEEIRGDQA 192
V ST HQ L + + + G++A
Sbjct: 948 VTSTLHQKLKFVRNGKLITVSGEEA 972
>gi|38347562|emb|CAE04995.2| OSJNBb0093G06.3 [Oryza sativa Japonica Group]
Length = 1986
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 754 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 813
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 814 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 873
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 874 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 907
>gi|356566612|ref|XP_003551524.1| PREDICTED: uncharacterized protein LOC100805548 [Glycine max]
Length = 2323
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 70/145 (48%)
Query: 48 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDK 107
+ +SF ++L H+ AL IS+ + + +L+D GSS+N++ +T++++
Sbjct: 881 NNLSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLSYRGPP 940
Query: 108 IKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRA 167
++ + G + G + L + + F V+ + Y+ +LGR WIH A
Sbjct: 941 MRRSGVVVKAFDGSRKSVIGEVDLPITIGPFVFQITFQVMDIQAAYSCLLGRPWIHGAGA 1000
Query: 168 VPSTCHQVLCYQTIYGIEEIRGDQA 192
V ST HQ L + + + G++A
Sbjct: 1001 VTSTLHQKLKFVRNGKLITVSGEEA 1025
>gi|110288733|gb|AAP52499.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1995
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 759 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 818
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 819 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 878
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 879 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 912
>gi|77554306|gb|ABA97102.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1233
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 759 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 818
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 819 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 878
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 879 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 912
>gi|147858290|emb|CAN83915.1| hypothetical protein VITISV_022301 [Vitis vinifera]
Length = 2174
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 57/125 (45%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL L S H L IS+ V + +DNGS++N+ AT +
Sbjct: 643 IVFSDDDLPLEGSDHTRPLYISVGCSGRRVPSVFLDNGSALNVCPLATAIALGYAPSDFG 702
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR WIH+ A+P
Sbjct: 703 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 762
Query: 170 STCHQ 174
S+ HQ
Sbjct: 763 SSLHQ 767
>gi|38347303|emb|CAE02298.2| OSJNBa0042F21.5 [Oryza sativa Japonica Group]
Length = 1950
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 692 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 751
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 752 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 811
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 812 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 845
>gi|356551733|ref|XP_003544228.1| PREDICTED: uncharacterized protein LOC100816508 [Glycine max]
Length = 2311
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 72/147 (48%)
Query: 46 SLSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQ 105
+ + +SF ++L H+ AL IS+ + + +L+D GSS+N++ +T++++ +
Sbjct: 867 ACNNLSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLSYQG 926
Query: 106 DKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKM 165
++ + G + G + L + + F V+ Y+ +LGR WIH+
Sbjct: 927 PPMRRSGVVVKAFDGSRKSVIGEVDLPITIGPFVFQITFQVMDIQVAYSCLLGRPWIHEA 986
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQA 192
AV ST HQ L + + + G++A
Sbjct: 987 GAVTSTLHQKLKFVRNGRLITVSGEEA 1013
>gi|54291754|gb|AAV32123.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1242
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 24/167 (14%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + PH D LVIS +I V+RIL+D GSS +++ KM L
Sbjct: 610 ISFGPEDAEGVLFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGL------ 663
Query: 110 LFEQPLIGLSGIVTNSDGVI--TLLVIAKSYSLLTD------------FLVVKATSPYNV 155
P L+ T+ G I + V+ +++ L+ F VV YN
Sbjct: 664 ----PTQALTPAPTSLRGFIVEAVQVLGQAFLLIAFGSGENRRVEQILFDVVNIPYNYNA 719
Query: 156 ILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
I GR ++K A+ + L G+ ++G Q +A + LA+
Sbjct: 720 IFGRATLNKFEAISHHNYLKLKMPGPTGVIVVKGLQPSAASKRDLAI 766
>gi|77555778|gb|ABA98574.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1984
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 737 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 796
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 797 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 856
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 857 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 890
>gi|31432435|gb|AAP54065.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1995
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 759 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 818
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 819 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 878
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 879 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 912
>gi|116309829|emb|CAH66866.1| H0307D04.11 [Oryza sativa Indica Group]
Length = 2017
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 759 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 818
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 819 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 878
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 879 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 912
>gi|78707624|gb|ABB46599.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 962
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 79 VKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKS 137
+ ++++D G+++N++ AT K+ R +D IK L G + + GV+ + +
Sbjct: 1 MSKMMVDGGAALNLMLYATFRKLGRNAEDLIKT-NMVLKDFGGNPSETKGVLNVELTVGG 59
Query: 138 YSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
++ T F V+ Y+++LGR W+H +PST HQ L
Sbjct: 60 KTIPTTFFVIDGKGSYSLLLGRDWVHANCCIPSTMHQCL 98
>gi|22128689|gb|AAM92802.1| putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 2017
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 759 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 818
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 819 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 878
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 879 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 912
>gi|78708235|gb|ABB47210.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1995
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 759 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 818
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 819 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 878
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 879 KFMAVPHYTYMMMKLPGPRGVLSLRSDIKQAVTC 912
>gi|38346888|emb|CAE03913.2| OSJNBb0015G09.7 [Oryza sativa Japonica Group]
Length = 1991
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 755 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 814
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 815 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 874
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 875 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 908
>gi|18071370|gb|AAL58229.1|AC084762_3 putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 2026
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 759 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 818
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 819 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 878
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 879 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 912
>gi|21741410|emb|CAD40114.1| OSJNBa0035O13.3 [Oryza sativa Japonica Group]
Length = 2008
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 755 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 814
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 815 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 874
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 875 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 908
>gi|51854356|gb|AAU10736.1| putative polyprotein [Oryza sativa Japonica Group]
gi|52353374|gb|AAU43942.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1995
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 757 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 816
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 817 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPTLA 876
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 877 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 910
>gi|50300537|gb|AAT73678.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1992
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 747 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 806
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 807 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 866
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 867 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 900
>gi|77555035|gb|ABA97831.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1564
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 5/136 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
ALV+S I N +KR+L+D G+S+NI+ A + ++ K++ P+IG++ T
Sbjct: 360 ALVVSPTIHNVKMKRVLVDGGASLNIISPAAFDALKAPGMKLQP-SLPIIGVTPGHTWPL 418
Query: 127 GVITLLV-IAKSYSLLT---DFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G + LLV S + T DF V PYN +LGR + K A + +
Sbjct: 419 GHVELLVTFGDSTNFRTERIDFDVADLNLPYNAVLGRPALVKFMAATHYAYLQMKMPGPA 478
Query: 183 GIEEIRGDQATAWACA 198
G I D A ACA
Sbjct: 479 GPITIFSDVKVALACA 494
>gi|77552546|gb|ABA95343.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 2289
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 1027 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 1086
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 1087 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 1146
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 1147 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 1180
>gi|46575993|gb|AAT01354.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 602
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Query: 88 SSVNILDDATVEKMRLE-----QDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLT 142
+ V + D+AT ++ R + +D IK L+ G + + GV+ + + + ++ T
Sbjct: 446 NQVPVADEATDDEARRKLGRNAKDLIKT-NMVLMDFGGNPSETKGVLNVELTVSNKTIPT 504
Query: 143 DFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
F V+ Y+++LGR WIH +PST HQ L IE + D++ A A LAL
Sbjct: 505 TFFVIDGKGSYSLLLGRDWIHANYCIPSTMHQCLIQWQDDKIEIVPADRSVNVASADLAL 564
Query: 203 KE 204
E
Sbjct: 565 WE 566
>gi|21741950|emb|CAD40441.1| OSJNBa0035B13.14 [Oryza sativa Japonica Group]
Length = 1736
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 660 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 719
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 720 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 779
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 780 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 813
>gi|32488668|emb|CAE03595.1| OSJNBa0087O24.18 [Oryza sativa Japonica Group]
Length = 1512
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V R+LID GSS+N+L + ++ M + + ++ +QP G++ ++
Sbjct: 511 IVVEPTIRNIKVARVLIDGGSSINLLFASALDAMGIPRSELTPTDQPFHGITPQSSSKPL 570
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V ++ + T+ F V + + YN I+GR + K A +QVL
Sbjct: 571 GKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFMAASHYAYQVLKMPGPK 630
Query: 183 GIEEIRGDQATAWACAVLAL 202
G I+G+ A C +L
Sbjct: 631 GTITIQGNAKLAVQCDKRSL 650
>gi|147790735|emb|CAN59929.1| hypothetical protein VITISV_023498 [Vitis vinifera]
Length = 1839
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Query: 62 SPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGI 121
S H L I++ V +L+DNGS++N+ AT + Q +
Sbjct: 643 SDHTRPLYITVVCSGHRVPSVLLDNGSALNVCPLATTIALGFAPSDFGPSTQTVRAYDNT 702
Query: 122 VTNSDGVIT--LLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
G +T LL+ ++S+L F V++ + +N++LGR WIH+ A+PS+ HQ
Sbjct: 703 QREVMGTLTIDLLIGPTAFSIL--FQVLRIPTSFNLLLGRPWIHQAGAIPSSLHQ 755
>gi|77553887|gb|ABA96683.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1844
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 759 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 818
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 819 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 878
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 879 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 912
>gi|38344380|emb|CAE02238.2| OSJNBb0054B09.2 [Oryza sativa Japonica Group]
gi|116309070|emb|CAH66179.1| OSIGBa0130O15.3 [Oryza sativa Indica Group]
gi|116309097|emb|CAH66204.1| OSIGBa0148D14.10 [Oryza sativa Indica Group]
Length = 1992
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSD 126
LV+ + N ++R LID GS++NIL T++ M++ + ++K P G + G+
Sbjct: 773 LVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPL 832
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V + T+ F V + Y+ ILGR + K AVP + ++
Sbjct: 833 GQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPR 892
Query: 183 GIEEIRGDQATAWAC 197
G+ +R D A C
Sbjct: 893 GVLSLRSDIKQAVTC 907
>gi|77555386|gb|ABA98182.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1940
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 759 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 818
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 819 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 878
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 879 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 912
>gi|108708718|gb|ABF96513.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 564
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSD 126
LV+ + + N ++R LID+GS++NIL T++ M++ + ++K P G + G+
Sbjct: 410 LVLDLVVRNVKLRRTLIDDGSALNILFAKTLDDMQIPRTELKPSNAPFHGVILGLSATPL 469
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V + T+ F V + Y+ ILGR + K AVP + ++
Sbjct: 470 GQITLPVTFGTRENFRTENVCFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPR 529
Query: 183 GIEEIRGDQATAWAC 197
G+ +R D A C
Sbjct: 530 GVISLRSDIKQAVTC 544
>gi|38343987|emb|CAD40453.2| OSJNBa0041M21.11 [Oryza sativa Japonica Group]
gi|38343995|emb|CAD40360.2| OSJNBa0093P23.6 [Oryza sativa Japonica Group]
gi|116309171|emb|CAH66269.1| OSIGBa0136B09.5 [Oryza sativa Indica Group]
Length = 1770
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V I N V R+LID GSS+N+L + ++ M + + ++ +QP G++ ++
Sbjct: 682 IVFEPTIQNIKVARVLIDGGSSINLLFASALDAMGIPRSELTPTDQPFHGITPQSSSKPF 741
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V ++ + T+ F V + + YN I+GR + K +A +QVL
Sbjct: 742 GKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFKAASHYAYQVLKMPRPK 801
Query: 183 GIEEIRGDQATAWAC 197
G ++G+ A C
Sbjct: 802 GTITVQGNAKLAVQC 816
>gi|19881590|gb|AAM00991.1|AC090482_20 Putative retroelement [Oryza sativa Japonica Group]
Length = 2017
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 759 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 818
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 819 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 878
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 879 KFMAVPHYTYMMMKLPGPRGVLSLRSDIKQAVTC 912
>gi|38344177|emb|CAE03508.2| OSJNBa0053K19.16 [Oryza sativa Japonica Group]
Length = 2010
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ ++
Sbjct: 752 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPHSEL 811
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 812 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 871
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 872 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 905
>gi|22795275|gb|AAN08247.1| putative GAG-POL precursor [Oryza sativa Japonica Group]
Length = 1696
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 710 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 769
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 770 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 829
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 830 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 863
>gi|147792148|emb|CAN72987.1| hypothetical protein VITISV_005625 [Vitis vinifera]
Length = 447
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 89 SVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVK 148
+++I +DA + KM ++ L G +G T S G I L + + L V
Sbjct: 149 TLDIENDALLCKMGFLPSALENSGHVLSGFNGASTTSLGDIVLPIKVE----LVILNVQL 204
Query: 149 ATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLALKETKRK 208
SP+NVI+GR W+H M+ +PST HQ+ + + IR + W V+ + + RK
Sbjct: 205 DLSPFNVIMGRTWLHDMKVIPSTYHQMAKVDKLLAVGFIREVEYPYWLANVVVVPKKGRK 264
>gi|77555933|gb|ABA98729.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1964
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSD 126
LV+ + N ++R LID GS++NIL T++ M++ + ++K P G + G+
Sbjct: 773 LVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPL 832
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V + T+ F V + Y+ ILGR + K AVP + ++
Sbjct: 833 GQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPR 892
Query: 183 GIEEIRGDQATAWAC 197
G+ +R D A C
Sbjct: 893 GVLTLRSDIKQAVTC 907
>gi|77552282|gb|ABA95079.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1966
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 754 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 813
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 814 KSSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 873
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 874 KFMAVPHYTYMMMKMPGPRGVLTLRSDIKQAVTC 907
>gi|260401292|gb|ACX37123.1| gag-pro [Pisum sativum]
Length = 1107
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 16/137 (11%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF DL H+ AL IS+ + + +L+D GSS+N+L +T+ ++
Sbjct: 827 LSFCDADLPEEGRDHNMALHISLNCKSDALSNVLVDTGSSLNVLPKSTLSRLS------- 879
Query: 110 LFEQPLIGLSGIVTNSD--------GVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQW 161
++ P + SG+V + G + L + F V+ Y+ +LGR W
Sbjct: 880 -YQGPPMRQSGVVVKAFDGSRKTVIGEVDLPIKIGPSDFQVTFQVMDIHPSYSCLLGRPW 938
Query: 162 IHKMRAVPSTCHQVLCY 178
IH+ AV ST HQ L +
Sbjct: 939 IHEAGAVTSTLHQKLKF 955
>gi|38346013|emb|CAE03952.2| OSJNBb0085H11.1 [Oryza sativa Japonica Group]
Length = 1605
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 4/157 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF +D + + PH D LVIS + V+RIL+ GSS +++ KM L +
Sbjct: 481 ISFGSEDAEGVMFPHQDPLVISAERAGFEVRRILVGRGSSADVIFAEAYAKMGLPTQALT 540
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
L G G G LL+ S + F VV YN I GR ++K
Sbjct: 541 PAPASLRGFGGEAVQVLGQALLLIALGSGENRREEQVLFDVVDIPYNYNAIFGRATLNKF 600
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
A+ + L + G+ ++G Q +A + LA+
Sbjct: 601 EAISHHNYLKLKMPGLTGVIVVKGLQPSAASKGDLAI 637
>gi|77554754|gb|ABA97550.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1541
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 5/146 (3%)
Query: 57 LKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLI 116
L + P LV+ + N ++R LID GS++NIL T++ M++ + ++K P
Sbjct: 536 LDRVVHPRRYPLVLDPVVRNIKLRRSLIDGGSALNILFAKTLDDMQIPRTELKPSNAPFH 595
Query: 117 G-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPST 171
G + G+ G ITL V + T+ F V + Y+ ILGR + K AVP
Sbjct: 596 GVIPGLSATPLGQITLPVTFGTRENFRTENICFEVADFETAYHAILGRPALAKFMAVPHY 655
Query: 172 CHQVLCYQTIYGIEEIRGDQATAWAC 197
+ ++ GI +R D A C
Sbjct: 656 TYMMMKMPGPRGIISLRSDIKQAVTC 681
>gi|77552111|gb|ABA94908.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1994
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSD 126
LV+ + N ++R LID GS++NIL T++ M++ + ++K P G + G+
Sbjct: 773 LVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPL 832
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V + T+ F V + Y+ ILGR + K AVP + ++
Sbjct: 833 GQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPR 892
Query: 183 GIEEIRGDQATAWAC 197
G+ +R D A C
Sbjct: 893 GVLTLRSDIKQAVTC 907
>gi|32489223|emb|CAE03842.1| OSJNBb0013J13.19 [Oryza sativa Japonica Group]
gi|38346029|emb|CAE01897.2| OSJNBa0059D20.1 [Oryza sativa Japonica Group]
Length = 1557
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 58/119 (48%)
Query: 58 KLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG 117
K ++ H L I+ + L+ ++++D G++VN++ A K+ + + L
Sbjct: 707 KGTENRHLKPLYINGYVNGKLMSKMMVDVGAAVNLMPFAMFRKLGRNAEGLIKTNMVLKD 766
Query: 118 LSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
G + + G++ + + S ++ T F V Y+++L R WIH +PST HQ L
Sbjct: 767 FGGNPSETKGILNVELTVGSKTIPTTFFVTDGKGSYSLLLRRDWIHANCCIPSTMHQCL 825
>gi|58531958|emb|CAE03068.2| OSJNBa0089E12.6 [Oryza sativa Japonica Group]
Length = 1939
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 5/140 (3%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG-LSGI 121
P LV+ + N ++R LID GS++NIL T++ M++ + ++K P G + G+
Sbjct: 773 PGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKSSNAPFHGVIPGL 832
Query: 122 VTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLC 177
G ITL V + T+ F V + Y+ ILGR + K AVP + ++
Sbjct: 833 SATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 892
Query: 178 YQTIYGIEEIRGDQATAWAC 197
G+ +R D A C
Sbjct: 893 MPGPRGVLTLRSDIKQAVTC 912
>gi|77553077|gb|ABA95873.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 856
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Query: 49 EVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
++SF P+D + + PH D LVIS ++ V+RIL+D GSS +++ KM L +
Sbjct: 23 QISFGPEDAEGVLFPHQDPLVISAEVVGFEVRRILVDGGSSADVIFAEAYVKMGLPTLAL 82
Query: 109 KLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHK 164
L G G G + L+V + + F V+ YN I GR ++K
Sbjct: 83 TQAPASLRGFGGEAVQVLGQVQLVVAFGTSENRREEQILFDVIDIPYNYNAIFGRATLNK 142
Query: 165 MRAV 168
A+
Sbjct: 143 FEAI 146
>gi|242092320|ref|XP_002436650.1| hypothetical protein SORBIDRAFT_10g006610 [Sorghum bicolor]
gi|241914873|gb|EER88017.1| hypothetical protein SORBIDRAFT_10g006610 [Sorghum bicolor]
Length = 303
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 78/183 (42%), Gaps = 26/183 (14%)
Query: 23 NCDDQLAIVTFKRGLPSNHPFFESLSEVSFLPQD-LKLIQSPHDDALVISIKIGNCLVKR 81
N D ++ + + P +H E+SF +D I P L++ I N R
Sbjct: 79 NIDSIDGLIAYPKFPPWSH------REISFNRKDQWAAIPEPGRFPLILDPCINNIRFVR 132
Query: 82 ILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSDGVITLLVIAKSYSL 140
+L+D GSS++IL ++ +++ ++K ++ G L G
Sbjct: 133 VLVDGGSSIDILFRNSLPALKISPAQLKPYDAQFWGVLPG------------------QK 174
Query: 141 LTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVL 200
+F+V Y+ ILGR + K AVP + VL T G+ +RG+ TA+ C
Sbjct: 175 FVNFVVADFDGTYHAILGRPSLTKFMAVPHYSYLVLKMPTEKGVLTVRGNVYTAYTCEEE 234
Query: 201 ALK 203
+ K
Sbjct: 235 SFK 237
>gi|53982138|gb|AAV25234.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1953
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 5/140 (3%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG-LSGI 121
P LV+ + N ++R LID GS++NIL T++ M++ + ++K P G + G+
Sbjct: 768 PGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGL 827
Query: 122 VTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLC 177
G ITL V + T+ F V + Y+ ILGR + K AVP + ++
Sbjct: 828 SATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 887
Query: 178 YQTIYGIEEIRGDQATAWAC 197
G+ +R D A C
Sbjct: 888 MPGPRGVLTLRSDIKQAVTC 907
>gi|77555417|gb|ABA98213.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1964
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSD 126
LV+ + N ++R LID GS++NIL T++ M++ + ++K P G + G+
Sbjct: 773 LVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPL 832
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V + T+ F V + Y+ ILGR + K AVP + ++
Sbjct: 833 GQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPR 892
Query: 183 GIEEIRGDQATAWAC 197
G+ +R D A C
Sbjct: 893 GVLTLRSDIKQAVTC 907
>gi|147774448|emb|CAN63397.1| hypothetical protein VITISV_010233 [Vitis vinifera]
Length = 355
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%)
Query: 100 KMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGR 159
KM ++ + L +G S G + L V +L F VV+ S + I+GR
Sbjct: 106 KMSYSPSALENLGRLLFEFNGATKTSQGDVVLPVQVGPVTLNVQFSVVEDLSHFCAIMGR 165
Query: 160 QWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
W+HKM+ VPST H+++ Y T G ++ G A C
Sbjct: 166 AWLHKMKVVPSTYHEMVSYLTENGQVDLLGSHLAACQC 203
>gi|108709395|gb|ABF97190.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1773
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 40 NHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVN 91
N P + SE + +K +S H D LV+ + N ++R LID GS++N
Sbjct: 788 NTPQYLRWSETA-----IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALN 842
Query: 92 ILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLV 146
IL T++ M++ + ++K P G + G+ G ITL V + T+ F V
Sbjct: 843 ILFAKTLDDMQIPRTELKPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENVCFEV 902
Query: 147 VKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
+ Y+ ILGR + K AVP + ++ G+ +R D A C
Sbjct: 903 ADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPRGVISLRSDIKQAVTC 953
>gi|18958679|gb|AAL82662.1|AC092387_10 retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|20270061|gb|AAM18149.1|AC092172_9 Putative gag-pol precursor [Oryza sativa Japonica Group]
gi|31430891|gb|AAP52743.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1964
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSD 126
LV+ + N ++R LID GS++NIL T++ M++ + ++K P G + G+
Sbjct: 773 LVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKSSNAPFHGVIPGLSATPL 832
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V + T+ F V + Y+ ILGR + K AVP + ++
Sbjct: 833 GQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPR 892
Query: 183 GIEEIRGDQATAWAC 197
G+ +R D A C
Sbjct: 893 GVLTLRSDIKQAVTC 907
>gi|46391119|gb|AAS90646.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1991
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 5/140 (3%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG-LSGI 121
P LV+ + N ++R LID GS++NIL T++ M++ + ++K P G + G+
Sbjct: 773 PGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKSSNAPFHGVIPGL 832
Query: 122 VTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLC 177
G ITL V + T+ F V + Y+ ILGR + K AVP + ++
Sbjct: 833 SATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 892
Query: 178 YQTIYGIEEIRGDQATAWAC 197
G+ +R D A C
Sbjct: 893 MPGPRGVLTLRSDIKQAVTC 912
>gi|12583803|gb|AAG59655.1|AC084319_13 putative gypsy-type retrotransposon [Oryza sativa Japonica Group]
Length = 1185
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 40 NHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVN 91
N P + SE + +K +S H D LV+ + N ++R LID GS++N
Sbjct: 650 NTPQYLRWSETA-----IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALN 704
Query: 92 ILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLV 146
IL T++ M++ + ++K P G + G+ G ITL V + T+ F V
Sbjct: 705 ILFAKTLDDMQIPRTELKPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENVCFEV 764
Query: 147 VKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
+ Y+ ILGR + K AVP + ++ G+ +R D A C
Sbjct: 765 ADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPRGVISLRSDIKQAVTC 815
>gi|108709390|gb|ABF97185.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1767
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D G++VN++ T K+ R +D IK L G
Sbjct: 771 HLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYTTFRKLGRNAEDLIKT-NLVLKDFGGNP 829
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + GV+ + + + ++ T V+ Y+++LGR WIH +PST HQ L
Sbjct: 830 SETKGVLNVELTVGNKTIPTTLFVIDGKGSYSLLLGRDWIHTNCCIPSTMHQCL 883
>gi|147854838|emb|CAN82416.1| hypothetical protein VITISV_039154 [Vitis vinifera]
Length = 402
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 79 VKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVIT--LLVIAK 136
V+ +L++NGS++N+ ATV + Q L + G +T LL+
Sbjct: 299 VQSVLLNNGSALNVYPLATVVTLDFAPSDFGSSTQTLRAYNSTQREVMGTLTIDLLIGLT 358
Query: 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
++S+L F V++ S ++++LGR WIH+ RA+PS+ HQ
Sbjct: 359 TFSIL--FQVLRIPSFFDLLLGRPWIHQARAIPSSLHQ 394
>gi|41393217|gb|AAS01940.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 680
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + PH D LVIS +I V+RIL+D GSS +++ M L +
Sbjct: 24 ISFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAKAYANMGLPTHALT 83
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGR 159
L G G LL+ S+ + F VV YN I GR
Sbjct: 84 PAPASLRSFGGEAVQVLGQALLLIAFGSWENRREEQVLFDVVDIPYNYNAIFGR 137
>gi|77550740|gb|ABA93537.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1405
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D G +VN++ AT K R +D IK L G
Sbjct: 791 HLKPLYINGYVNGKPMSKMMVDGGVTVNLMPYATFRKFGRNAEDLIKT-NMVLKNFGGNP 849
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + G + + + S ++ T F V+ Y+++LGR WIH +P T HQ L
Sbjct: 850 SETKGALNVELTVGSKTIPTMFFVIDGKGSYSLLLGRDWIHANCCIPLTMHQCL 903
>gi|147819110|emb|CAN71226.1| hypothetical protein VITISV_034453 [Vitis vinifera]
Length = 1769
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 56/125 (44%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F DL S H L I + V +L+DNGS++N+ T + D
Sbjct: 511 IAFSDDDLPPEGSNHVRPLFIDVACLGRRVPSVLLDNGSALNVCPLVTAIVLGFSPDDFG 570
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G G ++ V+ S F V++ S +N++LGR WIH+ A+P
Sbjct: 571 PSTQTVRAYDGTQKTVMGTLSTHVMIGPVSYSIVFQVLRIQSSFNLLLGRPWIHEAGAIP 630
Query: 170 STCHQ 174
+ HQ
Sbjct: 631 YSLHQ 635
>gi|46485805|gb|AAS98430.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 2004
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 5/140 (3%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG-LSGI 121
P LV+ + N ++R LID GS++NIL T++ M++ + ++K P G + G+
Sbjct: 773 PGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKSSNAPFHGVIPGL 832
Query: 122 VTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLC 177
G ITL V + T+ F V + Y+ ILGR + K AVP + ++
Sbjct: 833 SATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 892
Query: 178 YQTIYGIEEIRGDQATAWAC 197
G+ +R D A C
Sbjct: 893 MPGPRGVLTLRSDIKQAVTC 912
>gi|77555161|gb|ABA97957.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1984
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 752 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 811
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 812 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 871
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 872 KFMAVPHYTYMMMKMLGPRGVLSLRSDIKQAVTC 905
>gi|147864490|emb|CAN82635.1| hypothetical protein VITISV_008545 [Vitis vinifera]
Length = 1811
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%)
Query: 62 SPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGI 121
S H L IS+ V IL+DN S++N+ AT + Q +
Sbjct: 557 SDHTRPLYISVGCSGRRVPSILLDNSSTLNVCPLATTIALGYAPSDFGPSTQTVRAYDST 616
Query: 122 VTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
G + + ++ + +T F V++ + +N++LGR WIH++ A+PS+ HQ
Sbjct: 617 RREVMGTLEIELLISPATFVTVFQVLRIPTSFNLLLGRPWIHRVGAIPSSLHQ 669
>gi|38344492|emb|CAE05171.2| OSJNBa0013A04.8 [Oryza sativa Japonica Group]
gi|38347297|emb|CAE02473.2| OSJNBa0042D13.26 [Oryza sativa Japonica Group]
Length = 1374
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D+G++VN++ AT K+ R +D IK L G
Sbjct: 860 HLKPLYINGYVNGKPMSKMMVDSGAAVNLMPYATFRKLGRNAEDLIKT-NMVLKDFGGNP 918
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ GV+ + + S ++ T F V+ Y+++LGR IH +PST HQ L
Sbjct: 919 WETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDRIHANCCIPSTMHQCL 972
>gi|77556935|gb|ABA99731.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1752
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 15/168 (8%)
Query: 40 NHPFFESLSEVSFLPQDLKLIQSPHDD-----ALVISIKIGNCLVKRILIDNGSSVNILD 94
N P + SE++ +K +S H D LV+ + N ++R ID G+++NIL
Sbjct: 660 NTPQYLRWSEIA-----IKFDRSDHPDRVVRYPLVLDPVVRNVKLRRTFIDGGNALNILF 714
Query: 95 DATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKA 149
T++ M++ + ++K P G + G+ G ITL V + T+ F V
Sbjct: 715 AKTLDDMQIPRTELKPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENVCFEVADF 774
Query: 150 TSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
+ Y+ ILGR + K AVP + + G+ +R D A C
Sbjct: 775 ETAYHAILGRPALAKFMAVPHYTYMTMKMPGPRGVISLRSDIKQALTC 822
>gi|357498509|ref|XP_003619543.1| hypothetical protein MTR_6g057800 [Medicago truncatula]
gi|355494558|gb|AES75761.1| hypothetical protein MTR_6g057800 [Medicago truncatula]
Length = 155
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 58/111 (52%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I K+ + ++L+D G++VN++ + ++ + +K L G
Sbjct: 41 HLKTLFIQAKVDEIGINKVLVDGGAAVNLMPQSLLKMIGKTDKDLKPHNVILSNYEGKDG 100
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
+S G + + + + T F+VV + + +N++LGR+WIH + VPS+ HQ
Sbjct: 101 HSLGALQVSLTVGTVVRPTLFMVVPSKANFNLLLGREWIHGIGIVPSSMHQ 151
>gi|116311116|emb|CAH68043.1| OSIGBa0139N19-OSIGBa0137L10.12 [Oryza sativa Indica Group]
Length = 1650
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 4/157 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF +D + + PH D LVIS + V+RIL+ GSS +++ KM L +
Sbjct: 526 ISFGSEDAEGVMFPHQDPLVISAERAGFEVRRILVGRGSSADVIFAEAYAKMGLPTQALT 585
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
L G G G LL+ S + F VV YN I GR ++K
Sbjct: 586 PAPASLRGFGGEAVQVLGQALLLIAFGSGENRREEQVLFDVVDIPYNYNAIFGRATLNKF 645
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
A+ + L + G+ ++G Q +A + LA+
Sbjct: 646 EAISHHNYLKLKMPGLTGVIVVKGLQPSAASKGDLAI 682
>gi|28927675|gb|AAO62321.1| putative GAG-POL precursor [Oryza sativa Japonica Group]
Length = 1665
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIV 122
P + + I N V R+LID GSS+N+L +T++ M + Q+++ +QP G++
Sbjct: 488 PGRYPIAVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPQNELTPTDQPFHGITPQS 547
Query: 123 TNSD-GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLC 177
++ G ITL V ++ + T+ F V + + YN I+GR + K A +Q+L
Sbjct: 548 SSRPLGKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFMAASHYAYQMLK 607
Query: 178 YQTIYGIEEIRGDQATAWAC 197
G I+G+ C
Sbjct: 608 MPGPKGTITIQGNTKLVVQC 627
>gi|147864002|emb|CAN78804.1| hypothetical protein VITISV_002368 [Vitis vinifera]
Length = 325
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 17/120 (14%)
Query: 72 IKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITL 131
+++G+ +K + GSSV++L +KM ++ Q L G + T S G
Sbjct: 189 VRLGH--LKHYVRLEGSSVDLLQMFAFKKMGFPPSTLENPRQILPGFNRASTTSLG---- 242
Query: 132 LVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQ 191
+F VV+ SP+N I+G W+H M+A+PS H+++ Y T+ G + G Q
Sbjct: 243 -----------NFSVVEDLSPFNAIMGCTWLHGMKAIPSMYHKMVSYLTLDGHINLYGSQ 291
>gi|108708395|gb|ABF96190.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1602
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIV 122
P + + I N V R+LID GSS+N+L +T++ M + Q+++ +QP G++
Sbjct: 425 PGRYPIAVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPQNELTPTDQPFHGITPQS 484
Query: 123 TNSD-GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLC 177
++ G ITL V ++ + T+ F V + + YN I+GR + K A +Q+L
Sbjct: 485 SSRPLGKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFMAASHYAYQMLK 544
Query: 178 YQTIYGIEEIRGDQATAWAC 197
G I+G+ C
Sbjct: 545 MPGPKGTITIQGNTKLVVQC 564
>gi|147817100|emb|CAN66440.1| hypothetical protein VITISV_035237 [Vitis vinifera]
Length = 466
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 24/163 (14%)
Query: 58 KLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG 117
+++QS H+D L++++ I D +T ++M L ++ L
Sbjct: 320 RVLQS-HEDVLILTLGISK----------------FDMSTYKQMGLPPSALENPGWILSX 362
Query: 118 LSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLC 177
+G +T S G + L + + F VV+ SP+ I+G W+H M+ +PST HQ++
Sbjct: 363 FNGAMTISLGDVVLPIQVGPITQNVQFSVVEELSPFKAIMGCAWLHSMKVIPSTYHQMVS 422
Query: 178 YQTIYGIEEIRGDQ-------ATAWACAVLALKETKRKDSNFE 213
Y T G +I G Q A+ + + E++ + SN E
Sbjct: 423 YLTKBGQIDIFGSQLAXCXXYQVAFESELPSNSESRPEPSNME 465
>gi|116308854|emb|CAH65991.1| H1005F08.20 [Oryza sativa Indica Group]
Length = 1571
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V R+LID GSS+N+L + ++ M + + ++ +QP G++ ++
Sbjct: 618 IVVEPTIRNIKVARVLIDGGSSINLLFASALDAMGIPRSELTPTDQPFHGITPQSSSKPL 677
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V ++ + T+ F V + + YN I+GR + K A +QVL
Sbjct: 678 GKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALVKFMAASHYAYQVLKMPGPK 737
Query: 183 GIEEIRGDQATAWACAVLAL 202
G I+G+ A C +L
Sbjct: 738 GTITIQGNAKLAVQCDKRSL 757
>gi|48475214|gb|AAT44283.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1741
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 711 IKFDRSDHPDRVVHPGRYPLVLDPVVHNVKLRRSLIDGGSALNILFAKTLDDMQIPRTEL 770
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 771 KPSNAPFHGVIPGLSAKPLGQITLPVTFGTRENFRTENVYFEVADFETAYHAILGRSALA 830
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 831 KFMAVPHYTYMMMKMPGPRGVISLRSDIKQAVTC 864
>gi|62733316|gb|AAX95433.1| Reverse transcriptase (RNA-dependent DNA polymerase), putative
[Oryza sativa Japonica Group]
gi|77549989|gb|ABA92786.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1414
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 27 QLAIVTFKRGLPSNHPFFESLSEVSFLPQD-LKLIQSPHDDALVISIKIGNCLVKRILID 85
QLA+ KRG S + E ++ F +D K P +V+ I N V R+L+D
Sbjct: 486 QLALEKGKRGTASKMKWSEQ--KIEFSDEDHPKAAVIPGRYPIVVEPTIWNVKVARVLVD 543
Query: 86 NGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD-GVITL-LVIAKSYSLLTD 143
G+S+N+L +T++ M + + ++ +QP G++ ++ G ITL + +++ + T+
Sbjct: 544 GGNSINLLFASTLDAMGIPRGELTPTDQPFHGITPQSSSKPLGKITLPMTFSQASNFRTE 603
Query: 144 ---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
F V + + YN I+G+ + K A +QVL
Sbjct: 604 QITFDVAEFDTAYNAIIGKTALAKFMAASHYAYQVL 639
>gi|32489471|emb|CAE05825.1| OSJNBa0028M15.17 [Oryza sativa Japonica Group]
Length = 1218
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D G+ VN++ AT K+ R +D IK L G
Sbjct: 336 HLKPLYINGYVNGKPMSKMMVDGGAVVNLMPYATFRKLGRNAEDLIKT-NMVLKDFGGNP 394
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + G + + + + ++ T F V+ Y+++LGR WIH +PS HQ L
Sbjct: 395 SETKGGLNVELTVGNKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSAMHQCL 448
>gi|34761728|gb|AAQ82037.1| gag/pol polyprotein [Pisum sativum]
Length = 2262
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 20/151 (13%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLE----- 104
V F DL H+ AL I+++ ++ +L+D GSS+N+L ++K+ +E
Sbjct: 811 VGFTNLDLPPEGRNHNKALHITMECKGAVLSHVLVDTGSSLNVLPKQILKKIDVEGFVLT 870
Query: 105 -QDKI-KLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWI 162
D I + F++ + G VT + + + + + ++ F V+ Y+ +LGR WI
Sbjct: 871 PSDLIVRAFDRSKRSVCGEVT-----LPVKIGPEVFDII--FYVMDIQPAYSCLLGRPWI 923
Query: 163 HKMRAVPSTCHQVLCY------QTIYGIEEI 187
H AV ST HQ L Y T+ G EEI
Sbjct: 924 HAAGAVSSTLHQKLKYVWNGQIVTVCGEEEI 954
>gi|108705936|gb|ABF93731.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1953
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 717 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 776
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 777 KPSNAPFHGVILGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 836
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 837 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 870
>gi|108709069|gb|ABF96864.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 738
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 4/124 (3%)
Query: 49 EVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
++SF P D + + PH D LVIS +I V+RIL+D G+S +++ KM L +
Sbjct: 589 QISFRPGDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGTSADVIFAEAYAKMGLATQAL 648
Query: 109 KLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHK 164
L SG G L+V ++ + F VV YN I GR ++K
Sbjct: 649 TPAPASLRRFSGEAVQVLGQAQLMVAFRTAENRREEQVLFDVVDIPYNYNAIFGRATLNK 708
Query: 165 MRAV 168
A+
Sbjct: 709 FEAI 712
>gi|147859498|emb|CAN79257.1| hypothetical protein VITISV_031980 [Vitis vinifera]
Length = 496
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D I PH D L++S++IG+ V+RIL+D GSS +++ + + M ++
Sbjct: 361 FPPVDPTRILQPHRDTLILSLEIGDFDVRRILVDPGSSADLVQASVISHMGRSLTGLENP 420
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLV 146
+ + G +G T S G I LLV A +L F V
Sbjct: 421 GRIIFGFNGASTTSLGDIVLLVQAGLVTLNVQFSV 455
>gi|62734763|gb|AAX96872.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77549715|gb|ABA92512.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1945
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 709 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 768
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 769 KPSNVPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPVLA 828
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 829 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 862
>gi|57834068|emb|CAD40314.2| OSJNBb0013O03.9 [Oryza sativa Japonica Group]
Length = 507
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 5/137 (3%)
Query: 66 DALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNS 125
+ +V+ I N V R+L+D GSS+N+L +T++ M + ++ +QP G++ ++
Sbjct: 311 NPIVVEPTIRNIKVARVLVDGGSSINLLFASTLDAMGIPLGELTPTDQPFHGITPQSSSK 370
Query: 126 D-GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQT 180
G I L V ++ + T+ F VV+ + YN I+GR + K A +QVL
Sbjct: 371 PLGKIMLPVTFGQASNFRTEQITFHVVEFDTAYNAIIGRTALAKFMAASHYAYQVLKMPG 430
Query: 181 IYGIEEIRGDQATAWAC 197
G I+G+ A C
Sbjct: 431 PKGTITIQGNAKLAVQC 447
>gi|147852267|emb|CAN80129.1| hypothetical protein VITISV_018340 [Vitis vinifera]
Length = 2285
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 57/125 (45%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 707 IVFSDDDLPPEGSAHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 766
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR WIH+ A+P
Sbjct: 767 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRXGAIP 826
Query: 170 STCHQ 174
S+ HQ
Sbjct: 827 SSLHQ 831
>gi|77551059|gb|ABA93856.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1427
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 68/157 (43%), Gaps = 4/157 (2%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + PH D LVIS +I V+RIL+D GSS +++ KM L +
Sbjct: 606 ISFGPEDTEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALT 665
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKM 165
L G G LL+ S + F VV YN I G ++K
Sbjct: 666 PAPASLRGFGREPVQVLGQALLLIAFGSGENRREEQILFDVVDIPYNYNAIFGCATLNKF 725
Query: 166 RAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
A+ + L G+ ++G Q +A + LA+
Sbjct: 726 EAISHHNYLKLKMPGPIGVIVVKGLQPSAASKGDLAI 762
>gi|13876521|gb|AAK43497.1|AC020666_7 gag-pol precursor [Oryza sativa Japonica Group]
Length = 2017
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 759 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 818
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 819 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVDDFETAYHAILGRPALA 878
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 879 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 912
>gi|147865536|emb|CAN81563.1| hypothetical protein VITISV_019697 [Vitis vinifera]
Length = 522
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH + L++S++IG+ V+RIL+D GSS +++ + V R I L
Sbjct: 379 FPPVDPTRTLQPHCNVLILSLEIGDFDVRRILVDPGSSADLVQASVVG--RTGHSLIGL- 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYN 154
E P L G +G T S G I L V A +L F VV+ SP+N
Sbjct: 436 ENPGRILSGFNGSSTTSLGDIILTVQAGPVTLNVQFSVVQDLSPFN 481
Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A +VE C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQVEACSMDAVLQIFKRSICPGTPFFESLAK 158
>gi|110289529|gb|AAP54912.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1995
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 759 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 818
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 819 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVDDFETAYHAILGRPALA 878
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 879 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 912
>gi|77554434|gb|ABA97230.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1807
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 40 NHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVN 91
N P + SE++ +K +S H D LV+ + N ++R LID GS++N
Sbjct: 568 NTPQYLRWSEIA-----IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALN 622
Query: 92 ILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLV 146
IL T++ M++ + ++K P G + G+ G ITL V + T+ F V
Sbjct: 623 ILFAKTLDDMQIPRTELKPSNAPFHGVIPGLSATPLGHITLPVTFGTRENFRTENVCFEV 682
Query: 147 VKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
+ Y+ ILGR + K AVP + ++ G+ +R D A C
Sbjct: 683 ADFETAYHAILGRLALAKFVAVPHYTYMMIKMPGPRGVISLRNDIKQAVTC 733
>gi|108708807|gb|ABF96602.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1727
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V R+LID GSS+N+L +T++ M + Q ++ +QP G++ ++
Sbjct: 757 IVVEATIRNIKVARVLIDGGSSINLLFASTLDAMGIPQSELTPTDQPFHGITPQSSSRPL 816
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
G ITL V ++ + T+ F V + + YN I+GR K A +QVL
Sbjct: 817 GKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTAHAKFMAASHYAYQVL 870
>gi|359475724|ref|XP_003631741.1| PREDICTED: uncharacterized protein LOC100260551 [Vitis vinifera]
Length = 1856
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L I++ V +L+DNGS++N+ AT +
Sbjct: 269 IVFSADDLPPEGSDHTRPLYITVVCSGHRVLSVLLDNGSALNVCPLATAIVLGFAPSDFG 328
Query: 110 LFEQPLIGLSGIVTNSDGVIT--LLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRA 167
Q + G +T LL+ ++S+L F V++ +N++LGR WIH+ A
Sbjct: 329 PSTQTVRAYDSTQREVMGTLTIDLLIGPTTFSIL--FQVLRIPVSFNLLLGRPWIHQAGA 386
Query: 168 VPSTCHQ 174
+PS+ HQ
Sbjct: 387 IPSSLHQ 393
>gi|147836100|emb|CAN62090.1| hypothetical protein VITISV_013805 [Vitis vinifera]
Length = 2463
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 57/125 (45%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 620 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 679
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR WIH+ A+P
Sbjct: 680 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAIFQVLRIPTSFNLLLGRPWIHRAGAIP 739
Query: 170 STCHQ 174
S+ HQ
Sbjct: 740 SSLHQ 744
>gi|359474418|ref|XP_003631459.1| PREDICTED: uncharacterized protein LOC100853395 [Vitis vinifera]
Length = 2434
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 57/125 (45%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 807 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 866
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR WIH+ A+P
Sbjct: 867 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 926
Query: 170 STCHQ 174
S+ HQ
Sbjct: 927 SSLHQ 931
>gi|147867376|emb|CAN83278.1| hypothetical protein VITISV_009181 [Vitis vinifera]
Length = 2129
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 57/125 (45%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 644 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 703
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR WIH+ A+P
Sbjct: 704 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 763
Query: 170 STCHQ 174
S+ HQ
Sbjct: 764 SSLHQ 768
>gi|147819107|emb|CAN75602.1| hypothetical protein VITISV_018938 [Vitis vinifera]
Length = 1588
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 57/125 (45%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 668 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 727
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR WIH+ A+P
Sbjct: 728 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 787
Query: 170 STCHQ 174
S+ HQ
Sbjct: 788 SSLHQ 792
>gi|77556423|gb|ABA99219.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 2360
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 2137 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 2196
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 2197 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETTYHAILGRPALA 2256
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + + G+ +R D A C
Sbjct: 2257 KFMAVPHYTYMMTKMPGPRGVLSLRSDIKQAVTC 2290
>gi|147844453|emb|CAN80009.1| hypothetical protein VITISV_024812 [Vitis vinifera]
Length = 825
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%)
Query: 98 VEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVIL 157
+ +M LE +K + L G +G T S I L V A +L F +V+ P+NV L
Sbjct: 362 INQMGLELSGLKNPGRILSGFNGAATTSFIDIVLSVQAGPITLNVQFSMVEDLPPFNVSL 421
Query: 158 GRQWIHKMRAVPSTCHQVLCYQTIY 182
GR W+H M+ +PST HQ+ I+
Sbjct: 422 GRTWLHYMKTIPSTYHQMRLMTKIF 446
>gi|147768439|emb|CAN73637.1| hypothetical protein VITISV_020488 [Vitis vinifera]
Length = 2301
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 57/125 (45%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 706 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 765
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR WIH+ A+P
Sbjct: 766 PSTQTVRAYDSTRREVMGTLXIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 825
Query: 170 STCHQ 174
S+ HQ
Sbjct: 826 SSLHQ 830
>gi|224117514|ref|XP_002317595.1| predicted protein [Populus trichocarpa]
gi|222860660|gb|EEE98207.1| predicted protein [Populus trichocarpa]
Length = 238
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
Query: 55 QDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQP 114
+D+K + HDDALVI + N V R L++ G +VNIL + + ++ + ++ L + P
Sbjct: 119 RDMKGMTFLHDDALVIFTILYNYRVYRELVNEGRAVNILFNKIMAQIEINPLRLTLMKTP 178
Query: 115 LIGLSGI-VTNSDGVITLLVIA---KSYSLLTDFLVVKATSPYNVIL 157
LIG+ G+ + D + TL+ I+ K +L F+V+ + YN I+
Sbjct: 179 LIGIIGLRILMKDALETLITISTYPKCLTLQQTFMVIDMSLVYNAII 225
>gi|38344129|emb|CAD39841.2| OSJNBb0072N21.8 [Oryza sativa Japonica Group]
Length = 1790
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V R+LID GSS+N+L + ++ M + + K+ +QP G++ ++
Sbjct: 793 IVVEPTIRNIKVARVLIDGGSSINLLFASALDAMGIPRSKLTPTDQPFHGITPQSSSKPL 852
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V ++ + T+ F V + + YN I+GR + K A +QVL
Sbjct: 853 GKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRIALAKFMAASHYTYQVLKMPGPK 912
Query: 183 GIEEIRGDQATAWAC 197
G I G+ A C
Sbjct: 913 GTITILGNTKLAIQC 927
>gi|147863985|emb|CAN80489.1| hypothetical protein VITISV_039325 [Vitis vinifera]
Length = 2093
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L I++ V +L+DNG ++N+ AT +
Sbjct: 619 IVFSADDLPPEGSDHTRPLYITVVCSGHRVPSVLLDNGFALNVCPLATAMALGFAPSDFG 678
Query: 110 LFEQPLIGLSGIVTNSDGVIT--LLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRA 167
Q + G +T LL+ ++S+L F V++ + +N++LGR WIH+ A
Sbjct: 679 PSTQTVRAYDNTQREVMGTLTIDLLIGPTTFSIL--FQVLRIPASFNLLLGRPWIHQAGA 736
Query: 168 VPSTCHQ 174
+PS HQ
Sbjct: 737 IPSFLHQ 743
>gi|12583800|gb|AAG59652.1|AC084319_10 putative polyprotein [Oryza sativa Japonica Group]
Length = 340
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D G++VN++ T K+ R +D IK L G
Sbjct: 108 HLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYTTFRKLGRNAEDLIKT-NLVLKDFGGNP 166
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + GV+ + + + ++ T V+ Y+++LGR WIH +PST HQ L
Sbjct: 167 SETKGVLNVELTVGNKTIPTTLFVIDGKGSYSLLLGRDWIHTNCCIPSTMHQCL 220
>gi|41469127|gb|AAS07078.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1724
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V R+LID GSS+N+L +T++ M + Q ++ +QP G++ ++
Sbjct: 754 IVVEATIRNIKVARVLIDGGSSINLLFASTLDAMGIPQSELTPTDQPFHGITPQSSSRPL 813
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
G ITL V ++ + T+ F V + + YN I+GR K A +QVL
Sbjct: 814 GKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTAHAKFMAASHYAYQVL 867
>gi|147865890|emb|CAN78842.1| hypothetical protein VITISV_015163 [Vitis vinifera]
Length = 2177
Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 57/125 (45%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 706 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 765
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR WIH+ A+P
Sbjct: 766 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAIFQVLRIPTSFNLLLGRPWIHRAGAIP 825
Query: 170 STCHQ 174
S+ HQ
Sbjct: 826 SSLHQ 830
>gi|41469087|gb|AAS07061.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
Length = 971
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V R+LID GSS+N+L +T++ M + Q ++ +QP G++ ++
Sbjct: 777 IVVEATIRNIKVARVLIDGGSSINLLFASTLDAMGIPQSELTPTDQPFHGITPQSSSRPL 836
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
G ITL V ++ + T+ F V + + YN I+GR K A +QVL
Sbjct: 837 GKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTAHAKFMAASHYAYQVL 890
>gi|147791320|emb|CAN61329.1| hypothetical protein VITISV_014250 [Vitis vinifera]
Length = 566
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDG 127
L IS+ V +L+DNGS++N+ AT + Q + G G
Sbjct: 215 LYISVACSGHRVLIVLLDNGSTLNVYPLATTIALGFSPSNFGPSTQTVRAYDGTQRTVMG 274
Query: 128 VITLLVIAKS--YSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
+IT V+ YS+L F V+K S +N++LG WIH+ A+PS+ HQ
Sbjct: 275 IITTHVMIGPVRYSVL--FQVLKIQSSFNLLLGCPWIHEADAIPSSLHQ 321
>gi|147798949|emb|CAN61732.1| hypothetical protein VITISV_008285 [Vitis vinifera]
Length = 2237
Score = 53.9 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 57/125 (45%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 650 IVFSDDDLPPEGSGHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 709
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR WIH+ A+P
Sbjct: 710 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 769
Query: 170 STCHQ 174
S+ HQ
Sbjct: 770 SSLHQ 774
>gi|147776381|emb|CAN74201.1| hypothetical protein VITISV_036912 [Vitis vinifera]
Length = 1896
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 56/125 (44%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 505 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVSSVLLDNGSALNVCPLATAIALGYAPSDFG 564
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR WIH+ +P
Sbjct: 565 PSTQTVRAYDSTRREVMGTLKIELLIGPATFVVVFQVLRIPTSFNLLLGRPWIHRAGVIP 624
Query: 170 STCHQ 174
S+ HQ
Sbjct: 625 SSLHQ 629
>gi|147815071|emb|CAN74570.1| hypothetical protein VITISV_034081 [Vitis vinifera]
Length = 1998
Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 57/125 (45%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 566 IVFSDDDLPPEGSGHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 625
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR WIH+ A+P
Sbjct: 626 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 685
Query: 170 STCHQ 174
S+ HQ
Sbjct: 686 SSLHQ 690
>gi|147860177|emb|CAN82919.1| hypothetical protein VITISV_008801 [Vitis vinifera]
Length = 2318
Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 57/125 (45%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 707 IVFSDDDLPPEGSGHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 766
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR WIH+ A+P
Sbjct: 767 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 826
Query: 170 STCHQ 174
S+ HQ
Sbjct: 827 SSLHQ 831
>gi|359485628|ref|XP_003633300.1| PREDICTED: uncharacterized protein LOC100854777 [Vitis vinifera]
Length = 2323
Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 57/125 (45%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 723 IVFSDDDLPPEGSGHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 782
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR WIH+ A+P
Sbjct: 783 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 842
Query: 170 STCHQ 174
S+ HQ
Sbjct: 843 SSLHQ 847
>gi|147862160|emb|CAN82601.1| hypothetical protein VITISV_038468 [Vitis vinifera]
Length = 522
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + V MR ++
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMRHSLAGLENP 438
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVK 148
+ L G + T S G I L V A +L F VV+
Sbjct: 439 GRILSGFNRSSTTSLGDIILPVRAGPVTLNVQFSVVQ 475
>gi|54287556|gb|AAV31300.1| putative polyprotein [Oryza sativa Japonica Group]
gi|54291739|gb|AAV32108.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1988
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 759 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 818
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 819 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 878
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R + A C
Sbjct: 879 KFMAVPHYTYMMMKMPGPRGVLSLRSNIKQAVTC 912
>gi|147791400|emb|CAN76855.1| hypothetical protein VITISV_007394 [Vitis vinifera]
Length = 2130
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 56/125 (44%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V L+DNGS++N+ AT +R
Sbjct: 644 IVFSDDDLPPEGSDHTRHLYISVGFSGRRVPSALLDNGSALNVCPLATAIALRYAPSDFS 703
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR WIH+ A+P
Sbjct: 704 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 763
Query: 170 STCHQ 174
+ HQ
Sbjct: 764 FSLHQ 768
>gi|38345918|emb|CAE04522.2| OSJNBb0076A11.6 [Oryza sativa Japonica Group]
Length = 1453
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 5/140 (3%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG-LSGI 121
P LV+ + N ++R LID GS++NIL T+ M++ + ++K P G + G+
Sbjct: 319 PGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLVDMQIPRTELKPSNSPFHGVIPGL 378
Query: 122 VTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLC 177
G ITL V + T+ F V + Y+ ILGR + K AVP + ++
Sbjct: 379 SATPLGQITLPVTFGTRENFRTENICFKVADFETAYHTILGRPALAKFMAVPHYTYMMMK 438
Query: 178 YQTIYGIEEIRGDQATAWAC 197
G+ +R D A C
Sbjct: 439 MPGPRGVISLRSDIKQAITC 458
>gi|147805417|emb|CAN67439.1| hypothetical protein VITISV_020352 [Vitis vinifera]
Length = 929
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L I + + V IL+DNGS++N+ AT +
Sbjct: 180 IVFSYDDLPPEGSDHTHRLYIFVSCSSRRVPSILLDNGSALNVCPLATTIAIGYAPFDFG 239
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + +T F V++ + +N++LGR W HK RA+P
Sbjct: 240 PSTQTVRAYDNTRKKVMGTLEIELLIGPATFITVFQVLRIPTSFNLLLGRPWNHKARAIP 299
Query: 170 STCHQ 174
S+ H+
Sbjct: 300 SSLHR 304
>gi|147779182|emb|CAN69921.1| hypothetical protein VITISV_040638 [Vitis vinifera]
Length = 466
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P DL PH DAL++S++IG+ V+RIL+D GSS +++ + + M +
Sbjct: 346 FPPVDLTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHM---GHSLAGL 402
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLV 146
E P L G +G T S G I L V A +L F V
Sbjct: 403 ENPGXILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSV 440
>gi|38347264|emb|CAE05311.2| OSJNBa0056L23.9 [Oryza sativa Japonica Group]
Length = 836
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 613 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 672
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
+ P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 673 RPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENICFEVADFETAYHAILGRLALA 732
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 733 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 766
>gi|147814822|emb|CAN65803.1| hypothetical protein VITISV_014920 [Vitis vinifera]
Length = 1187
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%)
Query: 56 DLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPL 115
DL S H L IS+ + V +L+DNGS++N+ A + Q +
Sbjct: 682 DLPPEGSDHTCPLHISVGCSSRRVPSVLLDNGSALNVCPLAIAITIGYVPFDFGPSTQTV 741
Query: 116 IGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
+ G + + ++ S S +T F V++ + +N++LGR WIHK + +PS HQ
Sbjct: 742 RAYDSTRSEVMGTLEVELLIGSTSFITVFQVLRIPTSFNLLLGRPWIHKAKVIPSFFHQ 800
>gi|147818319|emb|CAN73538.1| hypothetical protein VITISV_012619 [Vitis vinifera]
Length = 225
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F P D + PH+DALV+++ +G V +ILID G+S ++L + +M ++
Sbjct: 14 ITFPPIDSNRVILPHEDALVLTLGVGGFDVHKILIDLGNSTDLLQMSAYRQMGYSLSALE 73
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGR 159
L +G S G + L V +L F +V+ SPYN I+G+
Sbjct: 74 NIVLILTSFNGASIVSLGDVILPVQVGPITLNVRFSIVEDLSPYNTIMGQ 123
>gi|147820364|emb|CAN69840.1| hypothetical protein VITISV_008391 [Vitis vinifera]
Length = 1996
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I++ V +L+DNGS++N+ AT + L Q +
Sbjct: 607 HVRPLYITVGCSGRRVPSVLLDNGSALNVCLLATAIALGFASSDFGLSTQTVRAYDSTKK 666
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
G + + + + T F V++ + +N++LGR WIH RA+PS+ HQ
Sbjct: 667 EVMGTLMIDLQIGPTTFSTLFQVLRIPTSFNLLLGRPWIHVARAIPSSLHQ 717
>gi|242036341|ref|XP_002465565.1| hypothetical protein SORBIDRAFT_01g041205 [Sorghum bicolor]
gi|241919419|gb|EER92563.1| hypothetical protein SORBIDRAFT_01g041205 [Sorghum bicolor]
Length = 1072
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSD 126
L++ I +R+L+D GSS++IL ++ +++ ++K ++ G L +
Sbjct: 866 LILDPCINGVRFERVLVDGGSSIDILFRNSLPALKISPAQLKPYDAQFWGVLPSQSSVPL 925
Query: 127 GVITLLVIAKS----YSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V + + +F+V Y+ ILGR + K AVP + VL T
Sbjct: 926 GQITLPVQFGTPDHFRTEFVNFVVADFDGTYHAILGRPSLTKFMAVPHYSYLVLKIPTEK 985
Query: 183 GIEEIRGDQATAWACAVLALKETKRKD-----SNFENQAKQ 218
G+ +RG+ TA+ C + K T+ D + NQA Q
Sbjct: 986 GVLTVRGNVYTAYTCEEESFKITEAIDLSIRMAETANQAAQ 1026
>gi|51038246|gb|AAT94049.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1844
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 759 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 818
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
+ P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 819 RPSNAPFHGAIPGLSATPLGQITLPVTFGTRENFRTENICFEVTDFETAYHAILGRPALA 878
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 879 KFMAVPHYTYIMMKMPGPRGVLSLRSDIKQAVTC 912
>gi|38345754|emb|CAE03482.2| OSJNBa0065O17.7 [Oryza sativa Japonica Group]
Length = 3331
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 29 AIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVK 80
++ + KR L + P E+ + L Q+ H A+V+S + N +
Sbjct: 2260 SLKSMKRELLAAAPTHEATRRARWSEVALTFDQTDHPPCVARGGQIAMVVSPTVCNVKLG 2319
Query: 81 RILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSL 140
R+LID G+++NIL A + ++ + ++L QP+IG++ T G I L V S +
Sbjct: 2320 RVLIDGGAALNILSPAAFDAIKAPRMVLRL-SQPIIGVTPGHTWPLGHIDLPVTFGSSAN 2378
Query: 141 L----TDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
DF VV + PYN +LGR + K A + + G + GD A A
Sbjct: 2379 FRTDRVDFDVVDLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPGGPITVHGDLKVALA 2438
Query: 197 C 197
C
Sbjct: 2439 C 2439
>gi|77550802|gb|ABA93599.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1912
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 755 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 814
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILG +
Sbjct: 815 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGHPALA 874
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 875 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 908
>gi|34015355|gb|AAQ56544.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1378
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N ++LID SS+N+L T++ M + + ++ +QP G++ ++
Sbjct: 587 IVVEPTIRNIKAAQVLIDGSSSINLLIANTLDAMGIPRSELTPTDQPFHGITPQSSSKPL 646
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V ++ + LT+ F V + + YN I+GR + K A +QVL +
Sbjct: 647 GKITLPVTFGQANNFLTEQITFDVAEFDTAYNAIIGRTALAKFMAASHYTYQVLKMPGLK 706
Query: 183 GIEEIRGDQATAWAC 197
G I+G+ A C
Sbjct: 707 GTITIQGNAMLAVQC 721
>gi|62733242|gb|AAX95359.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
Length = 635
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 10/174 (5%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSEVSFLPQDLKLI--QS 62
E+L+ YIRRF + D I FK G+ ++ E ++ + L I +
Sbjct: 460 ESLRDYIRRFNECRNTIPEITDASVIRVFKSGVRDHYTTQELATKRIVTARKLFEIVDRC 519
Query: 63 PH-DDAL--VISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLS 119
H DDAL S +I V R+LID+GSS+N+L +T++ M + + ++ +QP G++
Sbjct: 520 AHVDDALRRKKSGEISQGRVARVLIDSGSSINLLFASTLDVMGIPRSELTPTDQPFHGIT 579
Query: 120 GIVTNSD-GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAV 168
+++ G ITL V +++ + T+ F V + YN I+GR + K A
Sbjct: 580 PELSSKPLGKITLPVTFSQANNFQTEQITFDVAEFDMAYNAIIGRTALAKFMAA 633
>gi|147807325|emb|CAN66312.1| hypothetical protein VITISV_027164 [Vitis vinifera]
Length = 836
Score = 53.1 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 59/125 (47%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H +L IS+ + V +L+DNGS++N+ AT +
Sbjct: 480 IVFSEDDLPPGGSNHTRSLYISVGCSSRRVPSVLLDNGSALNVCPLATAIALGYALFNFG 539
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR WIH+ A+P
Sbjct: 540 PSTQTVRAYDSTRREVMGTLEIELLIGPTTFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 599
Query: 170 STCHQ 174
S+ HQ
Sbjct: 600 SSFHQ 604
>gi|89179457|gb|ABD63192.1| Reverse transcriptase family protein [Asparagus officinalis]
Length = 1146
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%)
Query: 62 SPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGI 121
S HD L IG+ V RI +D GS+V+I+ + + + K+ + G +
Sbjct: 6 SNHDRPLYFIGYIGSNKVNRIQVDPGSAVSIMPLRLMHSLGIPVSKLASTGTVIYGFNSS 65
Query: 122 VTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCY 178
+ G I + V+ A + YN++LGR WIH +PST HQ L Y
Sbjct: 66 GSRPLGKIRIKCQMGDLKTEVTCYVIDAETSYNLLLGRPWIHSNVIIPSTLHQCLKY 122
>gi|78708111|gb|ABB47086.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 949
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 53/108 (49%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L ++ + + ++++D G++VN++ AT K + + L G +
Sbjct: 410 HLKPLYVNGFVNGKPMSKMMVDGGAAVNLMPYATFRKQGRNAEVLIKTNMVLKDFGGTPS 469
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ GV+ + + S ++ T F V+ Y+++LGR WIH +PST
Sbjct: 470 ETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPST 517
>gi|57863837|gb|AAS75250.2| putative polyprotein [Oryza sativa Japonica Group]
Length = 1744
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 40 NHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVN 91
N P + SE++ +K +S H D LV+ + N ++R LID GS++N
Sbjct: 597 NTPQYLRWSEIA-----IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLQRTLIDGGSALN 651
Query: 92 ILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLV 146
IL T++ M++ + ++K P G + G+ G ITL V + T+ F V
Sbjct: 652 ILFAKTLDDMQIPRMELKPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENVCFEV 711
Query: 147 VKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
Y+ ILGR + K AVP + ++ G+ +R D A C
Sbjct: 712 ADFEIAYHAILGRPALAKFMAVPHYTYMMMKMPGPRGVISLRSDIKQAVTC 762
>gi|51854462|gb|AAU10841.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1528
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 6/154 (3%)
Query: 49 EVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
++ F P+D + + PH D LVIS +I V+RIL++ GSS +++ KM L +
Sbjct: 485 QIFFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVNGGSSADVIFAEAYAKMGLTTQAL 544
Query: 109 KLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAV 168
L G G G L+V ++ + + YN I GR ++K A+
Sbjct: 545 TPALTSLRGFGGEAVQVLGQAHLIV---AFGTGEN---RREEQNYNTIFGRATLNKFEAI 598
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
+ L G+ ++G Q +A + LA+
Sbjct: 599 SHHNYLKLKMPGPAGVIVVKGLQPSAASKGDLAI 632
>gi|62734137|gb|AAX96246.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550511|gb|ABA93308.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 936
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 5/140 (3%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIV 122
P +V+ I N V R+LID GSS+ +L +T++ M + + ++ +QP G++
Sbjct: 542 PGQYPIVVEPTIRNIKVTRVLIDGGSSIKLLFASTLDAMGIPRSELTPTDQPFHGITPQS 601
Query: 123 TNSD-GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLC 177
++ G ITL V ++ + T+ F V + + YN I+GR + K A +QVL
Sbjct: 602 SSKPLGKITLPVTFGQANNFRTEQITFDVAELDTAYNAIIGRTALAKFMAASHYAYQVLK 661
Query: 178 YQTIYGIEEIRGDQATAWAC 197
G I+G+ C
Sbjct: 662 MSGPKGTITIQGNAKLEVQC 681
>gi|13992671|gb|AAK51565.1|AC022352_1 Putative retroelement [Oryza sativa Japonica Group]
Length = 1175
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 53/108 (49%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L ++ + + ++++D G++VN++ AT K + + L G +
Sbjct: 683 HLKPLYVNGFVNGKPMSKMMVDGGAAVNLMPYATFRKQGRNAEVLIKTNMVLKDFGGTPS 742
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
+ GV+ + + S ++ T F V+ Y+++LGR WIH +PST
Sbjct: 743 ETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPST 790
>gi|147791751|emb|CAN66056.1| hypothetical protein VITISV_020755 [Vitis vinifera]
Length = 1529
Score = 53.1 bits (126), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 57/125 (45%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 651 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 710
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR WIH+ A+P
Sbjct: 711 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 770
Query: 170 STCHQ 174
S+ HZ
Sbjct: 771 SSLHZ 775
>gi|32487832|emb|CAE05063.1| OSJNBa0094P09.2 [Oryza sativa Japonica Group]
gi|39546270|emb|CAD39817.3| OSJNBa0079F16.18 [Oryza sativa Japonica Group]
Length = 1802
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 759 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 818
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G I L V + T+ F V + Y+ ILGR +
Sbjct: 819 KPSNAPFHGVIPGLSATPLGQIILPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 878
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 879 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 912
>gi|347952214|gb|AEP33252.1| pepsin-like aspartate proteases [Posidonia oceanica]
Length = 144
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 59/121 (48%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF +L + H+ L ++++ + + L+DNGSS+N+ K+ + + I
Sbjct: 16 ISFSSDELPPTGTNHNQPLFVTVQFKSFRIPLSLVDNGSSLNVCPLRIALKLGFKAEDIT 75
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
E+ + +S G++ + + + +F +V +N++LGR W+HK + +P
Sbjct: 76 SAEKGMTSFDNTHQDSLGILVIPLSIDPFVFNVEFYIVNLEPSFNLLLGRPWLHKHQVIP 135
Query: 170 S 170
Sbjct: 136 G 136
>gi|356570125|ref|XP_003553241.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
K02A2.6-like [Glycine max]
Length = 985
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 47 LSEVSFLP--QDLKLIQSPHDDA------LVISIKIGNCLVKRILIDNGSSVNILDDATV 98
+++VS+ +++ + P DD L ++ + N ++ +IL+D G++ NIL + +
Sbjct: 85 VTQVSYFTPHRNVAVFDPPTDDMRCYVKLLHLTAIVQNQIINKILVDGGAAFNILPRSML 144
Query: 99 EKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILG 158
K + + + G +S+ ++ L V+ T FLV+ + + + ++L
Sbjct: 145 RKFCKSVEDLIPHNIVVSDFCGKPLDSERLVCLDVLVGCRERPTVFLVISSQANFYMLLV 204
Query: 159 RQWIHKMRAVPSTCHQVLCY 178
R+WIHK+ AVPS HQ L +
Sbjct: 205 REWIHKVGAVPSLVHQKLFF 224
>gi|147839005|emb|CAN77064.1| hypothetical protein VITISV_032535 [Vitis vinifera]
Length = 501
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D I PH DAL++S++IG+ V+ IL+D+GSS +++ + V M ++
Sbjct: 366 FPPVDPTRILQPHRDALIMSLEIGDFDVRCILVDSGSSADLVQASVVSHMGHNLIGLENP 425
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLV 146
+ L G +G T S G I L V A +L FLV
Sbjct: 426 GRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFLV 460
>gi|147794995|emb|CAN76325.1| hypothetical protein VITISV_011886 [Vitis vinifera]
Length = 460
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P + PH DAL++S++IG+ V+RIL+D GSS +++ + V+ M +
Sbjct: 328 FPPVNPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVDHM---GHSLAGL 384
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVV 147
E P L G +G T S G I L V A +L F V+
Sbjct: 385 ENPGRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVI 423
>gi|54287555|gb|AAV31299.1| putative polyprotein [Oryza sativa Japonica Group]
gi|54291738|gb|AAV32107.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1857
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 40 NHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVN 91
N P + SE++ +K +S H D LV+ + N ++R LID GS+++
Sbjct: 704 NTPQYLQWSEIA-----IKFDRSDHPDRVVHPGQYPLVLDPVVRNVKLRRTLIDGGSALD 758
Query: 92 ILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLV 146
IL T++ M++ + ++K P G + G+ G ITL V + T+ F V
Sbjct: 759 ILFSKTLDDMQIPRTELKPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENVCFEV 818
Query: 147 VKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
+ Y+ ILGR + K AVP + ++ G+ ++ D A C
Sbjct: 819 ADLETAYHAILGRPALAKFMAVPYYTYMMMKMPGPRGVISLQSDIKQAVTC 869
>gi|62732765|gb|AAX94884.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|62732792|gb|AAX94911.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|77550142|gb|ABA92939.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1080
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 82 ILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSL 140
+++D+G++VN++ AT K+ R +D IK L G + + GV+ + + S ++
Sbjct: 1 MMVDSGAAVNLMPYATFRKLGRNAEDLIKT-NMVLKDFGGNPSETKGVLNVELTVGSKTI 59
Query: 141 LTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
T F V+ Y+++LGR IH +PST HQ L
Sbjct: 60 PTTFFVIDGKGSYSLLLGRDCIHANCCLPSTMHQCL 95
>gi|147866425|emb|CAN84140.1| hypothetical protein VITISV_033160 [Vitis vinifera]
Length = 224
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%)
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
T +D +T+ + S L+VK SPYN I+ W+HKM+ +PST HQ++ Y
Sbjct: 125 TGNDDALTIKSMDIPRSSARPTLLVKDLSPYNTIMEWVWLHKMKVIPSTYHQMVSYLIES 184
Query: 183 GIEEIRGDQATAWACAVLALK 203
G ++ G Q A C + +K
Sbjct: 185 GQVDLLGSQLVAQQCYQVTVK 205
>gi|110288734|gb|AAP52501.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1964
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 754 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 813
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILG +
Sbjct: 814 KSSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGHPALA 873
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 874 KFMAVPHYTYMMMKMPGPRGVLTLRSDIKQAVTC 907
>gi|22128685|gb|AAM92798.1| putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 1986
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 754 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 813
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILG +
Sbjct: 814 KSSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGHPALA 873
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 874 KFMAVPHYTYMMMKMPGPRGVLTLRSDIKQAVTC 907
>gi|147786974|emb|CAN60085.1| hypothetical protein VITISV_012518 [Vitis vinifera]
Length = 1119
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L ISI V +L+DNGS++N+ AT +
Sbjct: 9 IVFSDDDLPPEGSDHTRPLYISICCSGRRVPSVLLDNGSALNVCPLATAITLGYALSDFC 68
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q G + + ++ + + F V++ + +N++LG+ WIH++ A+P
Sbjct: 69 PSTQTFRTYDSTKRKVMGTLEIELLIGPATFIAVFQVLRIPTSFNLLLGQPWIHRVGAIP 128
Query: 170 STCHQ 174
S+ HQ
Sbjct: 129 SSLHQ 133
>gi|147772367|emb|CAN73430.1| hypothetical protein VITISV_031216 [Vitis vinifera]
Length = 1206
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L I++ V +L+DNGS++N+ AT +
Sbjct: 596 IVFSADDLPPEGSDHTRPLYITVVCSGHRVLSVLLDNGSALNVCPLATAIVLGFAPSDFG 655
Query: 110 LFEQPLIGLSGIVTNSDGVIT--LLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRA 167
Q + G +T LL+ ++S+L F V++ +N++LGR WIH+ A
Sbjct: 656 PSTQTVRAYDSTQREVMGTLTIDLLIGPTTFSIL--FQVLRIPVSFNLLLGRPWIHQAGA 713
Query: 168 VPSTCHQ 174
+PS+ HQ
Sbjct: 714 IPSSLHQ 720
>gi|51038039|gb|AAT93843.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1723
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIV 122
P +V+ I N V R+L+D GSS+N+L +T++ M + + +++ +QP G++
Sbjct: 662 PGRYPIVVKPTIRNIKVARVLVDGGSSINLLFASTLDAMGIPRGELRPTDQPFHGITPQS 721
Query: 123 TNSD-GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLC 177
++ G ITL V ++ + T+ F V + + YN I+GR + K A +QVL
Sbjct: 722 SSKPLGKITLPVTFGQASNFRTEQITFDVAEFDTTYNAIIGRTALTKFMAASYYVYQVLK 781
Query: 178 YQTIYGIEEIRGDQATAWAC 197
I+G+ A C
Sbjct: 782 MPGPNETITIQGNAKLAVQC 801
>gi|260447019|emb|CBG76432.1| OO_Ba0013J05-OO_Ba0033A15.19 [Oryza officinalis]
Length = 1336
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 81 RILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYS 139
++L+D G+SVN++ T K ++ +D IK L + GV+ + + + +
Sbjct: 717 KMLVDGGASVNLMPYTTFRKFGKVPEDLIKT-SMVLKDFGDNTSEGKGVLNVELTVGNKT 775
Query: 140 LLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ T F V Y+++ GR WIH VPST HQ L
Sbjct: 776 IPTTFFVFDGKGSYSLLWGRDWIHANCCVPSTMHQCL 812
>gi|147845557|emb|CAN82723.1| hypothetical protein VITISV_004793 [Vitis vinifera]
Length = 2115
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 56/125 (44%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 707 IVFSDDDLPPEGSSHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 766
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ +N++LGR WIH+ A+P
Sbjct: 767 PSTQTVRAYDSTRREVMGTLEIELLIGPTTFVVVFQVLRIPISFNLLLGRPWIHRAGAIP 826
Query: 170 STCHQ 174
S+ HQ
Sbjct: 827 SSLHQ 831
>gi|38346605|emb|CAD39796.2| OSJNBa0071G03.9 [Oryza sativa Japonica Group]
Length = 625
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSD 126
LV+ + + N ++R LID GS++NIL T++ M++ + ++K P G + G+
Sbjct: 483 LVLDLVVRNVKLRRSLIDGGSALNILFTKTLDDMQIPRTELKPSNAPFHGVIPGLSATPL 542
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V + T+ F V + Y+ IL R + K AVP + ++
Sbjct: 543 GQITLPVTFGTRENFRTENVCFKVADFKTAYHAILRRPALAKFMAVPHYTYMMMKMPGPR 602
Query: 183 GIEEIRGDQATAWAC 197
G+ +R D A C
Sbjct: 603 GVISLRSDIKQAVTC 617
>gi|147768456|emb|CAN71668.1| hypothetical protein VITISV_002492 [Vitis vinifera]
Length = 1146
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%)
Query: 62 SPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGI 121
S H L ISI V +L+DNGS++ I AT + Q +
Sbjct: 451 SDHTRPLYISIGCLGRRVPSVLLDNGSALKICHLATAIALGYAPSNFGPSTQTVRAYDST 510
Query: 122 VTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
G + + ++ + +T F V++ + +N++LGR WIH++ +PS+ HQ
Sbjct: 511 RREVIGTLKIELLIDPTTFVTVFQVLRIPTSFNLLLGRPWIHRVEVIPSSLHQ 563
>gi|19881674|gb|AAM01075.1|AC092748_13 Hypothetical protein with similarity to putative retroelement
[Oryza sativa Japonica Group]
Length = 818
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 13/153 (8%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + PH D LVIS +I V RIL+D GSS +++ KMRL +
Sbjct: 538 ISFGPEDAEGVMFPHQDPLVISAEIAGFEVLRILVDGGSSADVIFAEAYAKMRLPTQALT 597
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
L + I VI Y+ YN I GR ++K A+
Sbjct: 598 PAPASLRAFGSGENRREEQILFDVIDIPYN-------------YNAIFGRATLNKFEAIS 644
Query: 170 STCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
+ L G+ ++G Q +A + LA+
Sbjct: 645 HHNYLKLKMPGPKGVIVVKGLQPSAASKGNLAI 677
>gi|34015138|gb|AAQ56335.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 638
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 5/114 (4%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+++ I N V R+LID GSS+N+L +T++ M + + ++ +QP G++ ++
Sbjct: 515 IMVKPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPRSELTPTDQPFHGITPQSSSKPL 574
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
G ITL V ++ + T+ F V + + YN I+GR + K A +QVL
Sbjct: 575 GKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFMAASHYAYQVL 628
>gi|147832775|emb|CAN65896.1| hypothetical protein VITISV_027695 [Vitis vinifera]
Length = 2204
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 54/123 (43%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F DL S H IS+ V +L+DNGS++N+ A +
Sbjct: 623 FSDDDLPPEGSDHTRPFYISVGCSGRRVPSVLLDNGSALNVCPLAIAIALGYAPSDFGPS 682
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPST 171
Q + G + + ++ + + F V++ + +N++LGR WIH+ A+PS+
Sbjct: 683 TQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIPSS 742
Query: 172 CHQ 174
HQ
Sbjct: 743 LHQ 745
>gi|297720109|ref|NP_001172416.1| Os01g0554100 [Oryza sativa Japonica Group]
gi|255673357|dbj|BAH91146.1| Os01g0554100, partial [Oryza sativa Japonica Group]
Length = 169
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%)
Query: 118 LSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLC 177
G + + GV+ + + S ++ T V+ YN++LGR WIH +PST HQ L
Sbjct: 47 FGGNPSETKGVLNVELTVGSKTIPTTIFVIDGKGSYNLLLGRDWIHANCCIPSTMHQCLI 106
Query: 178 YQTIYGIEEIRGDQATAWACAVLALKETKRKD 209
IE + D++ A A LAL E D
Sbjct: 107 QWQGDKIEVVPADRSVNVASADLALWEMDGLD 138
>gi|62733892|gb|AAX96001.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|77550275|gb|ABA93072.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 884
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 13/170 (7%)
Query: 10 YIRRFRLASAKVE--NCD-DQLAIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD 66
Y RRF AK E D D + V+ + L FE P+ ++ H
Sbjct: 39 YQRRFCWNEAKFEPRQADVDDVEEVSARLVLSPEQAIFEK-------PEG---TENRHLK 88
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
L I+ + + ++++D G++VN++ T K+ D + L G + +
Sbjct: 89 PLYINGFVKGKPMSKMMVDGGAAVNLMPYTTFRKLDRNSDDLIKTNMVLKDFGGNPSETK 148
Query: 127 GVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
GV+ + + S ++ T F V+ Y+++LGR WIH + ST H L
Sbjct: 149 GVLNVELTVSSKTVPTIFFVIDGKGSYSLLLGRDWIHANFCIHSTMHYQL 198
>gi|224128574|ref|XP_002329037.1| predicted protein [Populus trichocarpa]
gi|222839708|gb|EEE78031.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L + KI + L+DNG++VNIL +E + + + G SG V
Sbjct: 79 HIKPLYLCAKIKGEETGKELVDNGTAVNILPRNMLEVIEKTVGDLTPTRVVISGFSGKVL 138
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ +I + S + T F +V YNV+L WIH +PST HQ+L
Sbjct: 139 QAKRMIEVSFKLDSLTAQTMFFIVDTVPNYNVLLENDWIHVNDCIPSTLHQML 191
>gi|32489468|emb|CAE05822.1| OSJNBa0028M15.14 [Oryza sativa Japonica Group]
Length = 1123
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 5/140 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V R+LID GSS+N+L +T++ M + + ++ +QP G++ ++
Sbjct: 641 IVVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPRSELTPTDQPFHGITSQSSSKPL 700
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V ++ + T+ F V + YN I GR + K A +QV
Sbjct: 701 GKITLRVTFGQANNFRTEQITFDVAEFDIAYNAISGRTALVKFMATSHYAYQVFKMPGPK 760
Query: 183 GIEEIRGDQATAWACAVLAL 202
G I+G+ A C +L
Sbjct: 761 GTITIQGNAKLAVQCDKRSL 780
>gi|78708446|gb|ABB47421.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 678
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 13/153 (8%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + PH D LVIS +I V RIL+D GSS +++ KMRL +
Sbjct: 398 ISFGPEDAEGVMFPHQDPLVISAEIAGFEVLRILVDGGSSADVIFAEAYAKMRLPTQALT 457
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
L + I VI Y+ YN I GR ++K A+
Sbjct: 458 PAPASLRAFGSGENRREEQILFDVIDIPYN-------------YNAIFGRATLNKFEAIS 504
Query: 170 STCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
+ L G+ ++G Q +A + LA+
Sbjct: 505 HHNYLKLKMPGPKGVIVVKGLQPSAASKGNLAI 537
>gi|108862185|gb|ABA96443.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1472
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 49 EVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
++SF P+D + + PH D LVIS ++ V+RIL+D GS +++ KM L +
Sbjct: 510 KISFEPEDAEGVLFPHQDPLVISAEVAGFEVRRILVDGGSLADVIFAEAYAKMGL--PTL 567
Query: 109 KLFEQP--LIGLSGIVTNSDGVITLLVI------AKSYSLLTDFLVVKATSPYNVILGRQ 160
L + P L G G V G + L+V + +L D + + YN I R
Sbjct: 568 ALTQAPALLRGFGGEVVQVLGQVQLVVAFGISENRREEQILFDIVDIPYN--YNAIFSRA 625
Query: 161 WIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQAT 193
++K A+ + L G+ ++G Q +
Sbjct: 626 TLNKFEAISHHNYLKLTMPGPIGVIVVKGLQPS 658
>gi|30089739|gb|AAP20843.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|108708895|gb|ABF96690.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1547
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 12/183 (6%)
Query: 21 VENCDDQLAIVTFKRGLPSNHPFFESLSEVSFLPQDL-KLIQSPHDDALVISIKIGNCLV 79
+E+C + FK+ L + + ++ F +D K P +V+ I N
Sbjct: 510 LEDC------LVFKKSLAKHMALEKGKRKIEFSEEDRPKTAVIPERYPIVVEPTIRNIKF 563
Query: 80 KRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD-GVITLLV-IAKS 137
R+LID SS+N+L +T++ M + + ++ QP G++ ++ G ITL V +++
Sbjct: 564 ARVLIDGDSSINLLFASTLDAMGIPRSELTPTGQPFHGITPQSSSKPLGKITLRVTFSQA 623
Query: 138 YSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATA 194
+ T+ F V + + YN I+GR + + A +QVL GI I+G+ A
Sbjct: 624 NNFRTEQITFDVAEFDTTYNAIIGRTALARFMAASHYAYQVLKMPGPKGIITIQGNVKLA 683
Query: 195 WAC 197
C
Sbjct: 684 IQC 686
>gi|11967913|dbj|BAB19768.1| putative gypsy-type retrotransposon RIRE2 [Oryza sativa Japonica
Group]
Length = 983
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 88/215 (40%), Gaps = 48/215 (22%)
Query: 40 NHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVN 91
N P + SE++ +K +S H D LV+ + N ++R LID GS++N
Sbjct: 748 NTPQYLRWSEIA-----IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALN 802
Query: 92 ILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSDGVITLLVI----AKSYSLLTDFLV 146
IL T++ M++ + ++K P G + G+ G ITL V S + F V
Sbjct: 803 ILFAKTLDDMQIPRTELKPSNAPFHGVIPGLSATPLGQITLPVTFGTRENSRTKNVCFEV 862
Query: 147 VKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGI---------------------- 184
+ Y+ ILGR + K AVP + ++ G+
Sbjct: 863 ADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPRGVISLWSDIKQAVTCDKESCEMAQ 922
Query: 185 --------EEIRGDQATAWACAVLALKETKRKDSN 211
EEIR D TA V A K TK ++S+
Sbjct: 923 IRKITLAREEIRLDATTASEGEVPATKLTKTEESD 957
>gi|224112685|ref|XP_002332728.1| predicted protein [Populus trichocarpa]
gi|222833012|gb|EEE71489.1| predicted protein [Populus trichocarpa]
Length = 150
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F P D + I+ PH+DALVIS + V + L+D+ S +NIL + K+ ++ ++
Sbjct: 29 ITFTPADGQGIKYPHEDALVISTVMEGHRVHKTLVDDDSLMNILSAEAMTKIGMDAFRMT 88
Query: 110 LFEQPLIGLSG---IVTNSDGVITLLVIA 135
+ PLIG+ G ++ ++G+I + A
Sbjct: 89 IVPTPLIGIEGSAVLMKGAEGLIVTMGTA 117
>gi|52353533|gb|AAU44099.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1645
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 49 EVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
++ F P+D + + PH D LVIS +I V+RIL+D GSS N++ KM E
Sbjct: 671 QIFFGPEDAEGVMFPHHDPLVISAEIAGFEVRRILVDGGSSANVIFAEAYAKMGRE---- 726
Query: 109 KLFEQPLIGLSGIVTNSDGVITLLVIAKSYSL-LTDFLVVKATSPYNVIL 157
EQ L + I N + + + K ++ ++L +K P VI+
Sbjct: 727 ---EQVLFDVVDIPYNYNAIFGRATLNKFEAISHHNYLKLKMPGPAGVIV 773
>gi|147805290|emb|CAN69360.1| hypothetical protein VITISV_029446 [Vitis vinifera]
Length = 757
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 4/127 (3%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL H L I++ V +L+DNGS++NI AT +
Sbjct: 479 IVFSDDDLPPEGPDHVRPLYITVGCSGRRVPSVLLDNGSALNIFPLATAIALGFAPSDFG 538
Query: 110 LFEQPLIGLSGIVTNSDG--VITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRA 167
Q + G VI L + +S L F V++ + +N++LGR WIH+ RA
Sbjct: 539 PSTQTVRAYDSTKGEVMGTLVIDLQIGPAIFSTL--FQVLRIPASFNLLLGRPWIHRARA 596
Query: 168 VPSTCHQ 174
+PS+ HQ
Sbjct: 597 IPSSLHQ 603
>gi|147843786|emb|CAN79456.1| hypothetical protein VITISV_004376 [Vitis vinifera]
Length = 2080
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 57/125 (45%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 544 IVFSDDDLPPEGSGHMRPLYISVGCSGRRVLSVLLDNGSALNVCPLATAIALGYAPSDFG 603
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR WIH+ A+P
Sbjct: 604 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 663
Query: 170 STCHQ 174
S+ HQ
Sbjct: 664 SSLHQ 668
>gi|108862798|gb|ABA98874.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 893
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+VI I N V R+LID GSS+N+L +T++ M + Q ++ +QP G++ ++
Sbjct: 783 IVIEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPQSELTPTDQPFHGITPQSSSRPL 842
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAV 168
G ITL V ++ + T+ F V + + YN I+GR + K A
Sbjct: 843 GKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFMAA 888
>gi|62732823|gb|AAX94942.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550210|gb|ABA93007.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 646
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 9/131 (6%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V R+LID GSS+N+ T++ M + + ++ QP G++ ++
Sbjct: 464 IVVEPTIRNIKVARVLIDGGSSINLFFACTLDVMGIPRSELTPTNQPFHGITPQSSSKPL 523
Query: 127 GVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEE 186
G ITL I F V + + YN I+GR + K A +QVL G
Sbjct: 524 GKITLPHIT--------FDVAEFDTAYNAIIGRNALAKFMAASHYAYQVLKMPGPKGTIT 575
Query: 187 IRGDQATAWAC 197
I+G+ A C
Sbjct: 576 IQGNAKLAVQC 586
>gi|32488514|emb|CAE03266.1| OSJNBa0011J08.21 [Oryza sativa Japonica Group]
Length = 452
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 5/137 (3%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIV 122
P +V+ I N V R+L+D GSS+N+L T++ M + + ++ +QP G++
Sbjct: 22 PGRYPIVVEPTIRNIKVARVLVDGGSSINLLFAGTLDAMGIPRSELTPTDQPFHGITPQS 81
Query: 123 TNSD-GVITLLVI---AKSYSL-LTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLC 177
++ G ITL V A ++ + F V + + YN I+GR + K A +QVL
Sbjct: 82 SSKPLGKITLPVTFGQANNFRMEQITFDVAEFDTAYNAIIGRTALTKFMAASHYAYQVLK 141
Query: 178 YQTIYGIEEIRGDQATA 194
G I+G+ A
Sbjct: 142 MPGPKGTIIIQGNTKLA 158
>gi|54287609|gb|AAV31353.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1799
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 554 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 613
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 614 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 673
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ + +R D A C
Sbjct: 674 KFMAVPHYTYMMMKMPGPRRVLSLRSDIKQAVTC 707
>gi|147795510|emb|CAN67750.1| hypothetical protein VITISV_034322 [Vitis vinifera]
Length = 1347
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL L S H L I++ V +L+DNGS +NI T + +
Sbjct: 459 IVFSDYDLPLEGSNHTRPLYITVGCSGHRVPSVLLDNGSVLNICPLTTTIALSYALLEFS 518
Query: 110 LFEQPLIGLSGIVTNSDG--VITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRA 167
Q + G +I LL+ ++ +L F V K + +N++LGR WIH++
Sbjct: 519 PSAQTVKAYDSTKRKVMGTLMIELLIGPTTFPIL--FQVFKIPTSFNLLLGRPWIHRVGD 576
Query: 168 VPSTCHQ 174
+PS+ HQ
Sbjct: 577 IPSSLHQ 583
>gi|46063437|gb|AAS79740.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1756
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 498 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 557
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 558 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 617
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ + +R D A C
Sbjct: 618 KFMAVPHYTYMMMKMPGPRRVLSLRSDIKQAVTC 651
>gi|77556325|gb|ABA99121.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 1681
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+++ I N V R+LID GSS+N+L +T++ + Q ++ +QP G++ ++
Sbjct: 702 IMVEPTIRNIKVARVLIDGGSSINLLFASTLDATGIPQSELTPTDQPFHGITPQSSSRPL 761
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V ++ + T+ F VV+ + N I+GR + K A +QVL
Sbjct: 762 GKITLPVTFGQANNFRTEQITFDVVEFDTACNAIIGRTALVKFMAAFHYVYQVLKMPGPK 821
Query: 183 GIEEIRGDQATAWAC 197
G IRG+ A C
Sbjct: 822 GTITIRGNAKLAVQC 836
>gi|20303586|gb|AAM19013.1|AC084748_3 putative gag-pol precursor protein [Oryza sativa Japonica Group]
Length = 1497
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 40 NHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVN 91
N P + SE + +K +S H D LV+ + N ++R LID GS++N
Sbjct: 459 NTPQYLRWSETA-----IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALN 513
Query: 92 ILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLV 146
IL T++ M++ + ++K P G + G+ G ITL V + T+ F V
Sbjct: 514 ILFANTLDDMQIPRTELKPSNAPFHGVIPGLSATPLGQITLPVTFGTQENFRTENVCFEV 573
Query: 147 VKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
+ Y+ ILGR + + AVP + ++ G+ ++ D A C
Sbjct: 574 ADFETAYHAILGRPALAEFMAVPHYTYMMMKMPGPRGVISLQSDIKQAVTC 624
>gi|147841478|emb|CAN62106.1| hypothetical protein VITISV_033315 [Vitis vinifera]
Length = 2351
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 56/125 (44%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 459 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 518
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + + + ++ + + F V++ + +N++LGR WIH+ A+P
Sbjct: 519 PSTQTVRAYDSTRREVMSTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 578
Query: 170 STCHQ 174
S+ HQ
Sbjct: 579 SSLHQ 583
>gi|21741359|emb|CAD39982.1| OSJNBa0032B23.2 [Oryza sativa Japonica Group]
Length = 337
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 52/123 (42%), Gaps = 4/123 (3%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D PH D LVIS +I V RIL D GSS +++ KM L +
Sbjct: 50 ISFGPEDAVGFMFPHQDPLVISAEIAGFEVPRILDDGGSSADVIFAEAYTKMGLLTQALT 109
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKS----YSLLTDFLVVKATSPYNVILGRQWIHKM 165
L G G G LLV S + F VV YN I GR ++K
Sbjct: 110 PAPASLRGFGGEAVQVLGQALLLVAFGSGENRHEEQVLFDVVDIPYNYNAIFGRATLNKF 169
Query: 166 RAV 168
A+
Sbjct: 170 DAI 172
>gi|147845877|emb|CAN80080.1| hypothetical protein VITISV_002679 [Vitis vinifera]
Length = 503
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D SS +++ + V +M ++
Sbjct: 367 FPPVDPTXTLQPHRDALILSLEIGDFDVRRILVDPSSSADLVQASVVGRMGHSLTGLENP 426
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLV 146
+ L G +G T S G I L V A +L FL
Sbjct: 427 GRILSGFNGSSTTSLGDIILPVQAGPVTLNVHFLT 461
>gi|147784827|emb|CAN68567.1| hypothetical protein VITISV_013174 [Vitis vinifera]
Length = 1241
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 55/137 (40%), Gaps = 35/137 (25%)
Query: 39 SNHPFFESLSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATV 98
S HP E ++F P D I PH D L++++ I + V+ L
Sbjct: 1078 SAHPIDEV---ITFPPVDPNRILQPHRDVLILTLGISDFDVRWTLS-------------- 1120
Query: 99 EKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILG 158
G + T S G I L V A L F +V SP+N ILG
Sbjct: 1121 ------------------GFNEASTTSLGDIVLPVQAGPVILNVQFSMVANLSPFNAILG 1162
Query: 159 RQWIHKMRAVPSTCHQV 175
W+H M+A PST HQ+
Sbjct: 1163 CAWLHGMKATPSTYHQM 1179
>gi|31432019|gb|AAP53711.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1725
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 659 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRTEL 718
Query: 109 KLFEQPLIG-LSGIVTNSDGVITL-LVIAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL L + T+ F V + Y+ ILGR +
Sbjct: 719 KPSNAPFHGVIPGLSAMPLGQITLPLTFGTRENFRTENICFEVADFETEYHAILGRPALA 778
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ + +R D A C
Sbjct: 779 KFMAVPHYTYMMMKMPGPREVISLRSDIKQAVTC 812
>gi|108711348|gb|ABF99143.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1318
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 40 NHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVN 91
N P + SE + +K +S H D LV+ + N ++R LID GS++N
Sbjct: 554 NTPQYLRWSETA-----IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALN 608
Query: 92 ILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLV 146
IL T++ M++ + ++K P G + G+ G ITL V + T+ F V
Sbjct: 609 ILFANTLDDMQIPRTELKPSNAPFHGVIPGLSATPLGQITLPVTFGTQENFRTENVCFEV 668
Query: 147 VKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
+ Y+ ILGR + + AVP + ++ G+ ++ D A C
Sbjct: 669 ADFETAYHAILGRPALAEFMAVPHYTYMMMKMPGPRGVISLQSDIKQAVTC 719
>gi|20451040|gb|AAM22011.1|AC093178_6 Putative gag-pol precursor [Oryza sativa Japonica Group]
gi|31430828|gb|AAP52687.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1933
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 759 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 818
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ ITL V + T+ F V + Y+ ILGR +
Sbjct: 819 KPSNAPFHGVIPGLSATPLCQITLPVTFGTRENFRTENISFEVADFETTYHAILGRPALA 878
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 879 KFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTC 912
>gi|38567751|emb|CAE76039.1| B1292H11.25 [Oryza sativa Japonica Group]
Length = 1610
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 46 SLSEVSFLPQDLKLIQSPHDDA--------LVISIKIGNCLVKRILIDNGSSVNILDDAT 97
+ S++ +L Q ++ + + H +V+ I N V R+L+D GSS+N+L +T
Sbjct: 507 AASKMKWLGQKVEFLDADHHKTAVTQGRYPIVVEPTIRNINVARVLVDGGSSINLLFAST 566
Query: 98 VEKMRLEQDKIKLFEQPLIGLSGIVTNSD-GVITLLVIAKSYSLLTDFLVVKATSPYNVI 156
++ M + + ++ +QP G++ ++ G ITL + F V + + YN I
Sbjct: 567 LDAMGIPRGELTPTDQPFHGITPQSSSKPLGKITLPIT---------FDVAEFDTAYNAI 617
Query: 157 LGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
+GR + K A +QVL I+G+ A C
Sbjct: 618 IGRTALAKFMAASHYVYQVLKMPGPKETITIQGNAKLAVQC 658
>gi|77554143|gb|ABA96939.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 389
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 4/124 (3%)
Query: 49 EVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
++SF P+D + + PH D LVIS ++ V+RIL+D GSS +++ KM L +
Sbjct: 179 QISFGPEDAEGVLFPHQDPLVISAEVAGFEVRRILVDGGSSADVIFAEAYAKMGLPTLAL 238
Query: 109 KLFEQPLIGLSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHK 164
L G G G + L+V S + + F V YN I R ++K
Sbjct: 239 TQAPASLRGFGGEAVQVLGQVQLVVAFGTSENRRKEQILFDAVDIPYNYNAIFCRTTLNK 298
Query: 165 MRAV 168
A+
Sbjct: 299 FDAI 302
>gi|147833610|emb|CAN61770.1| hypothetical protein VITISV_041898 [Vitis vinifera]
Length = 530
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D SS +++ + V M +
Sbjct: 388 FPPVDPTRTLEPHRDALILSLEIGDFDVRRILVDPSSSADLVQASVVAHM---GHNLMGL 444
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVK 148
E P L G +G T S G I L V A +L F VV+
Sbjct: 445 ENPGRILSGFNGSSTTSLGDIILPVQAGPITLNVQFSVVQ 484
>gi|22953960|gb|AAN11193.1| Putative gag-pol precursor [Oryza sativa Japonica Group]
gi|31430035|gb|AAP52006.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 927
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 40 NHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVN 91
N P + SE++ +K +S H D LV+ + N ++R LID GS++N
Sbjct: 692 NTPQYLRWSEIA-----IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALN 746
Query: 92 ILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLV 146
IL T++ M++ + ++K P G + G+ G ITL V + T+ F V
Sbjct: 747 ILFVKTLDDMQIPRTELKPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENVCFEV 806
Query: 147 VKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
+ Y+ ILG + K AVP + ++ G+ +R D A C
Sbjct: 807 ADFETAYHAILGGPALAKFMAVPHYTYMMIKMPGPRGVISLRSDIKQAVTC 857
>gi|24899466|gb|AAN65036.1| putative RIRE2 retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1300
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 40 NHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVN 91
N P + SE + +K +S H D LV+ + N ++R LID GS++N
Sbjct: 536 NTPQYLRWSETA-----IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALN 590
Query: 92 ILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLV 146
IL T++ M++ + ++K P G + G+ G ITL V + T+ F V
Sbjct: 591 ILFANTLDDMQIPRTELKPSNAPFHGVIPGLSATPLGQITLPVTFGTQENFRTENVCFEV 650
Query: 147 VKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
+ Y+ ILGR + + AVP + ++ G+ ++ D A C
Sbjct: 651 ADFETAYHAILGRPALAEFMAVPHYTYMMMKMPGPRGVISLQSDIKQAVTC 701
>gi|77553737|gb|ABA96533.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 770
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V I N V R++ID GSS+N+L +T++ M + + K+ +QP G++ ++
Sbjct: 576 IVAEPTIRNIKVARVVIDGGSSINLLFASTLDVMGIPRSKLTPTDQPFHGITPQSSSKPL 635
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V ++ + T+ F V + + YN I+GR + K A +QVL
Sbjct: 636 GKITLPVTFGQANNFRTEQITFGVAEFDTEYNTIIGRTALAKFMAASYYAYQVLKMPGPK 695
Query: 183 GIEEIRGDQATAWACAVLAL 202
I+G+ A C +L
Sbjct: 696 ETITIQGNAKLAVQCDKWSL 715
>gi|147800846|emb|CAN73211.1| hypothetical protein VITISV_040705 [Vitis vinifera]
Length = 1187
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL L S H L ISI V +L++NGS++N+ AT +
Sbjct: 129 IVFSYDDLPLEGSNHTRPLYISIDCSGHRVSSVLLNNGSALNVYPLATAIALGYAPSDFG 188
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + + + ++ + +T F V++ +N +LGR WIH++ A+P
Sbjct: 189 PSNQIVRAYDNTRREVMSTLEIELLIDPTTFITVFQVLRIPISFNPLLGRPWIHRVGAIP 248
Query: 170 STCHQ 174
+ HQ
Sbjct: 249 YSLHQ 253
>gi|147791936|emb|CAN72441.1| hypothetical protein VITISV_032854 [Vitis vinifera]
Length = 2089
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I++ V +L+DNGS++N+ AT + L Q +
Sbjct: 677 HVRPLYITVGCSGRRVPSVLLDNGSALNVCPLATAIALGFAPSDFGLSTQTIRAYDSTKR 736
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
G + + + + T F V++ + +N++LGR WIH A+PS+ HQ
Sbjct: 737 EVLGTLMIDLQIGPATFSTLFQVLRIPTSFNLLLGRPWIHVAGAIPSSLHQ 787
>gi|147770964|emb|CAN60961.1| hypothetical protein VITISV_013253 [Vitis vinifera]
Length = 434
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH D L++S++IG+ V+RIL+D GSS +++ + V M ++
Sbjct: 314 FPPVDPTRTLQPHRDTLILSLEIGDFDVRRILVDPGSSTDLVQASVVSHMGHSLTGLENP 373
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSL 140
+ L G +G+ T S G I L V A +L
Sbjct: 374 GRILSGFNGLSTTSLGDIVLPVQADPVTL 402
>gi|147841863|emb|CAN66924.1| hypothetical protein VITISV_011828 [Vitis vinifera]
Length = 294
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 57 LKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLI 116
+ ++QS H+DAL++++++ V+RIL+D GS N+L + ++M +K + L
Sbjct: 192 VSVLQS-HEDALILTLRVCGFDVRRILVDPGSLANLLQMSAYKQMGYLPSTLKNSGRLLS 250
Query: 117 GLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILG 158
+ T S G + L V S +L FLVV PYN I+G
Sbjct: 251 RFNEATTTSLGDVVLPVKTGSVTLNVRFLVVDDLFPYNAIIG 292
>gi|62733374|gb|AAX95491.1| hypothetical protein [Oryza sativa Japonica Group]
gi|77550247|gb|ABA93044.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 640
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSD 126
LV+ + N ++R LID GS++NIL ++ M++ + ++K P G + G+ +
Sbjct: 438 LVLDPVVRNVKLRRSLIDGGSALNILFAKMLDDMQIPRTELKPSNAPFHGVIPGLSSTPL 497
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
ITL V + T+ F VV + Y+ ILGR + K AVP + ++
Sbjct: 498 SQITLPVAFGTRENFRTENICFEVVDFETAYHAILGRPALAKFMAVPYYTYMMMKMPGPR 557
Query: 183 GIEEIRGDQATAWAC 197
G+ +R D A C
Sbjct: 558 GVISLRSDIKQAVTC 572
>gi|358343522|ref|XP_003635850.1| hypothetical protein MTR_012s0030 [Medicago truncatula]
gi|355501785|gb|AES82988.1| hypothetical protein MTR_012s0030 [Medicago truncatula]
Length = 328
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%)
Query: 98 VEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVIL 157
++K+ L +K + L G +S G I + ++ T FLVV + S YN++L
Sbjct: 39 LKKIGLSDYDLKPHDVVLSNYEGKYGSSFGAINVDLVVGITKRETLFLVVASKSNYNLLL 98
Query: 158 GRQWIHKMRAVPSTCHQVL 176
GR+WIH + AVPST HQ L
Sbjct: 99 GREWIHGVGAVPSTMHQRL 117
>gi|147775389|emb|CAN62720.1| hypothetical protein VITISV_028838 [Vitis vinifera]
Length = 472
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 70 ISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVI 129
I + C V +L+DNG ++N+ T + Q + G G +
Sbjct: 142 IDVACSGCRVPSVLLDNGFALNVCPLVTAIALGFSPSDFGPSIQTVRAYDGTQRTVMGTL 201
Query: 130 TLLVIAKS--YSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
T V+ YS+L F V++ S +N++LGR WIH+ A+PS HQ
Sbjct: 202 TAHVMIGPVRYSVL--FQVLRIRSSFNLLLGRPWIHEAGAIPSYLHQ 246
>gi|77551287|gb|ABA94084.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1756
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 40 NHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVN 91
N P + SE++ +K +S H D LV+ + N ++R LID S++N
Sbjct: 719 NTPQYLRWSEIA-----IKFDRSDHPDRVVHPGRYPLVLYPVVRNVKLQRTLIDGSSALN 773
Query: 92 ILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLV 146
IL T++ M++ + ++K P G + G+ G ITL V + T+ F V
Sbjct: 774 ILFAKTLDDMQIPRTELKPSNAPFHGVILGLSATPLGQITLPVTFGTRENFRTENVCFEV 833
Query: 147 VKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
+ Y+ ILGR + K AVP + ++ G+ +R D A C
Sbjct: 834 ADFETTYHAILGRPALAKFMAVPHYTYMMMKMPGPRGVISLRSDIKQAVTC 884
>gi|108709708|gb|ABF97503.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1172
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 4/152 (2%)
Query: 55 QDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQP 114
+D + + PH D LVIS +I V+RIL+D GSS +++ KM L +
Sbjct: 362 EDAEGVTFPHQDPLVISAEIAGFEVRRILVDGGSSTDVIFAEAYAKMGLTTQALTPAPTS 421
Query: 115 LIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKMRAVPS 170
L G G G L+V + + F VV YN I GR ++K +
Sbjct: 422 LRGFGGEAVQVLGQAQLIVAFGTGENRREEQVLFDVVDIPYNYNAIFGRATLNKFEVISH 481
Query: 171 TCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
+ L G+ I+G +A + LA+
Sbjct: 482 HNYLKLKMSGPAGVIVIKGLHPSAASKGDLAI 513
>gi|33113963|gb|AAP94585.1| putative gag-pol precursor [Zea mays]
Length = 1833
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 14/187 (7%)
Query: 25 DDQLAIVTFKRGLPSNHPFFESLSEVSFLPQDLKL-IQSPHDDALVISIKIGNCLVKRIL 83
D Q+ + T G P+ P+ S ++F +D L P L++ I VK++L
Sbjct: 647 DRQILVAT--TGPPA--PYRWSEHPITFTREDQWLNFDHPGKYPLLVDPVIRESRVKKVL 702
Query: 84 IDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD---GVITLLV-IAKSYS 139
+D GSS+N+ T++ + + ++ + P G+ + T + G I + V +
Sbjct: 703 VDGGSSINVTFPRTLQGLGVHLKELHESDTPFFGI--VPTEGEYPLGHIYMPVTFGTPEN 760
Query: 140 LLTDFL---VVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
T+FL V YN I+GR + K A+P + +L GI +R D A
Sbjct: 761 YRTEFLRFEVANFDCGYNAIIGRSGLAKFMAIPHYTYMILKMPGPRGIITVRADFQGAAE 820
Query: 197 CAVLALK 203
C +A++
Sbjct: 821 CFRVAIQ 827
>gi|147795639|emb|CAN61210.1| hypothetical protein VITISV_014941 [Vitis vinifera]
Length = 1180
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I+I V +L+DNGS++N+ AT + Q +
Sbjct: 23 HIRPLYITIGCSGRRVPSVLLDNGSALNVCPLATAIALGFAPSDFGPSTQTVRAYDSTKR 82
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
G + + + + T F V++ + +N++LGR WIH +R +PS+ HQ
Sbjct: 83 KVMGTLMIDLQNSPATFSTLFQVLRIPTSFNLLLGRPWIHIVRVIPSSLHQ 133
>gi|147774137|emb|CAN65549.1| hypothetical protein VITISV_001618 [Vitis vinifera]
Length = 1553
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 56/125 (44%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNG ++N+ AT +
Sbjct: 600 IVFSDDDLPPEGSDHTHPLYISVGCSGRRVSSVLLDNGLALNVCPLATAIALEYAPSDFG 659
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + +T F V++ + +N++LG+ WIH+ A+P
Sbjct: 660 PSTQTVRAYDNTRREVMGTLEIELLISPTTFVTVFQVLRILTSFNLLLGQPWIHRAGAIP 719
Query: 170 STCHQ 174
+ HQ
Sbjct: 720 YSLHQ 724
>gi|224130326|ref|XP_002328581.1| predicted protein [Populus trichocarpa]
gi|222838563|gb|EEE76928.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 8 KYYIRRFRLASAKVENCDDQLA---------IVTFKRGLPSNHPFFESLSE----VSFLP 54
K Y++RF VEN + +A I+T +RG N F SL + + F
Sbjct: 74 KAYLKRFNKEMLMVENLIELIASKALISEGVILTMERGSMGNKSFTRSLGQCHKPIVFTL 133
Query: 55 QDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNIL 93
+D +++ PH+DAL+IS I N V +L+D+ VNIL
Sbjct: 134 EDREVVAFPHEDALIISTVISNHRVHWVLVDDDGVVNIL 172
>gi|50838920|gb|AAT81681.1| putative retrotransposon protein [Oryza sativa Japonica Group]
Length = 1168
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 4/152 (2%)
Query: 55 QDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQP 114
+D + + PH D LVIS +I V+RIL+D GSS +++ KM L +
Sbjct: 358 EDAEGVTFPHQDPLVISAEIAGFEVRRILVDGGSSTDVIFAEAYAKMGLTTQALTPAPTS 417
Query: 115 LIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKMRAVPS 170
L G G G L+V + + F VV YN I GR ++K +
Sbjct: 418 LRGFGGEAVQVLGQAQLIVAFGTGENRREEQVLFDVVDIPYNYNAIFGRATLNKFEVISH 477
Query: 171 TCHQVLCYQTIYGIEEIRGDQATAWACAVLAL 202
+ L G+ I+G +A + LA+
Sbjct: 478 HNYLKLKMSGPAGVIVIKGLHPSAASKGDLAI 509
>gi|15217214|gb|AAK92558.1|AC051624_16 Putative retroelement [Oryza sativa Japonica Group]
Length = 1429
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 5/122 (4%)
Query: 74 IGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSDGVITLL 132
+ N + R LI GS++NIL T+E M++ + ++KL P G + G+ G ITL
Sbjct: 625 VRNIKLPRTLIGGGSALNILFAKTLEDMQIPRTELKLSNAPFHGVIPGLSATPLGQITLP 684
Query: 133 VIAKSYSLL----TDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIR 188
V + F VV + Y+ ILGR + K+ AVP + ++ G+ +R
Sbjct: 685 VTFGTRENFRIENVCFEVVDFETAYHAILGRPALAKLMAVPHYTYMMMKMPGPQGVISLR 744
Query: 189 GD 190
D
Sbjct: 745 SD 746
>gi|147783641|emb|CAN61609.1| hypothetical protein VITISV_042499 [Vitis vinifera]
Length = 2112
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 55/117 (47%)
Query: 58 KLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG 117
+L S H L IS+ V +L+DNGS++N+ AT + Q +
Sbjct: 227 QLRGSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFGPSTQIVRA 286
Query: 118 LSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
G + + ++ + + F V++ + +N++L R WIH+ RA+PS+ +Q
Sbjct: 287 YDSTRREVMGTLEIELLIGPATFVAVFQVLRILTSFNLLLSRPWIHRARAIPSSLNQ 343
>gi|37700339|gb|AAR00629.1| putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1445
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V R+LID GSS+N+L + ++ M + + ++ +QP G++ + ++
Sbjct: 490 IVVEPTIRNINVARVLIDGGSSMNLLFASALDAMGIPRSELTPTDQPFHGITPLSSSKPL 549
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V ++ + T+ F V + YN I+GR + K +A +Q+L
Sbjct: 550 GKITLPVTFRQANNFRTEQITFDVAEFVIAYNAIIGRTALAKFKAASHYTYQMLKMLGPK 609
Query: 183 GIEEIRGDQATAWAC 197
G I+G+ C
Sbjct: 610 GTITIQGNAKLTVQC 624
>gi|147781714|emb|CAN60825.1| hypothetical protein VITISV_027420 [Vitis vinifera]
Length = 1918
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I++ V +L+DNGS++N+ AT + Q ++
Sbjct: 510 HVRPLYITVGCSGRRVPSVLLDNGSALNVCPLATAIALGFAPSDFGPSTQTVMAYDSTKR 569
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
G + + + + T F V++ + +N++LGR WIH + A+PS+ HQ
Sbjct: 570 EVMGTLMIDLQIGPATFSTLFQVLRIPTSFNLLLGRPWIHVVVAIPSSLHQ 620
>gi|34015123|gb|AAQ56321.1| putative polyprotein [Oryza sativa Japonica Group]
gi|34015133|gb|AAQ56330.1| hypothetical protein OSJNBa0095C12.21 [Oryza sativa Japonica Group]
Length = 760
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D G++VN++ T K+ R +D IK L
Sbjct: 418 HLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYTTFRKLGRNAEDLIKT-NMVLKDFGSNP 476
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + V+ + + + ++ T F V+ Y+++LGR WIH +PST HQ L
Sbjct: 477 SETKEVLNVELTVGNKTIPTTFSVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 530
>gi|38346106|emb|CAE04584.2| OSJNBb0006N15.1 [Oryza sativa Japonica Group]
gi|38346685|emb|CAD40563.2| OSJNBa0069D17.16 [Oryza sativa Japonica Group]
Length = 647
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 69 VISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD-G 127
V+ + N +KR LID G ++NIL T+++M++ + +++L P G+ + +++ G
Sbjct: 444 VLDPVVRNVKLKRTLIDGGRALNILFAKTLDEMQISRIELRLRNAPFHGVFLVFSSTPLG 503
Query: 128 VITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
IT+ V + TD F V + Y+ +LGR + K A+P + ++ G
Sbjct: 504 QITMPVTFGTGENFHTDNVCFEVADFETAYHAMLGRPALAKFMAIPHYTYMMMKMPRPRG 563
Query: 184 IEEIRGDQATAWAC 197
+ +R D A C
Sbjct: 564 VISLRSDVKQAITC 577
>gi|147785235|emb|CAN77389.1| hypothetical protein VITISV_013681 [Vitis vinifera]
Length = 2282
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 695 IVFSDDDLPPEGSGHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 754
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + V++ + +N++LGR WIH A+P
Sbjct: 755 PSTQTVRXYDSTRREVMGTLEIELLIGPATFVAVVQVLRIPTSFNLLLGRPWIHXAGAIP 814
Query: 170 STCHQ 174
S+ HQ
Sbjct: 815 SSLHQ 819
>gi|110288531|gb|ABB46607.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 537
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V +L+D GSS+N+L +T++ M + + ++ +QP G++ ++
Sbjct: 343 IVVEPTIRNIKVALVLVDGGSSINLLFASTLDAMGIPRSELTPTDQPFHGITPQSSSKPL 402
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V ++ + T F V + + YN I+GR + K A ++VL
Sbjct: 403 GKITLPVTFGQASNFRTKQITFHVAEFDTAYNAIIGRTALVKFMAASHYAYEVLKMPGPK 462
Query: 183 GIEEIRGDQATAWAC 197
G I+G+ A C
Sbjct: 463 GTITIQGNAKLAVQC 477
>gi|32480097|emb|CAE01988.1| OSJNBb0033G08.4 [Oryza sativa Japonica Group]
Length = 701
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 79 VKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD-GVITLLVI--- 134
V +LID GSS+N+L +T++ M + + + +QP G++ ++ G ITLLV
Sbjct: 519 VTPVLIDGGSSINLLFASTLDVMGIPRSDLTPTDQPFHGITPQSSSKPLGKITLLVTFGQ 578
Query: 135 AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATA 194
A ++ V + + YN I+GR + K A +QVL G I+G+ A
Sbjct: 579 ANNFRTEQITFVAEFDTAYNAIIGRTALAKFMAASHYAYQVLKMPGPKGTITIQGNAKLA 638
Query: 195 WACAVLAL 202
C + +L
Sbjct: 639 VQCDMRSL 646
>gi|147860317|emb|CAN79703.1| hypothetical protein VITISV_040677 [Vitis vinifera]
Length = 1305
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
+L I I V +L+DNGS++N+ T + Q +I
Sbjct: 283 SLYIIIGCSGHRVPXVLLDNGSTLNVCPLTTTIALSFASSNFGPSTQIVIAYDNTKREVM 342
Query: 127 G--VITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCY 178
G VI LL+ ++S L F V++ + +N++LGR WIH++ +PS+ HQ + +
Sbjct: 343 GTLVIDLLIGTTTFSTL--FQVLRISISFNLLLGRPWIHRVVXIPSSLHQQMKF 394
>gi|108862562|gb|ABA97602.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 721
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSD 126
LV+ + N ++R LID GS++NIL T++ M++ + ++K P G + G+
Sbjct: 579 LVLDPVVRNVKLRRSLIDGGSALNILFAKTLDDMQIPRTELKPSNAPFHGVIPGLSATPL 638
Query: 127 GVITL-LVIAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL + + T+ F V + Y+ ILGR + AVP + ++ +
Sbjct: 639 GQITLPITFGARENFRTENVYFEVADFETAYHAILGRPALVMFMAVPHYTYMMMKMPSPR 698
Query: 183 GIEEIRGDQATAWAC 197
G+ +R D A C
Sbjct: 699 GVISLRSDIKQAVTC 713
>gi|108862341|gb|ABA96229.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1850
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 13/181 (7%)
Query: 29 AIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVK 80
++ KR L + P E+ + L Q+ H A+V+S + N +
Sbjct: 547 SLKAMKRELLAAAPTHEATRRARWSEVALTFDQTDHPPCIARGGQIAMVVSPTVCNVKLG 606
Query: 81 RILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AK 136
R+LID G+++NIL A + ++ ++L QP+IG++ T G I L V A
Sbjct: 607 RVLIDGGAALNILSPAAFDAIKAPGMVLRL-SQPIIGVTPGHTWPLGHIDLPVTFGGSAN 665
Query: 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
+ +F V + PYN +LGR + K A + + ++ G + GD A A
Sbjct: 666 FRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPSLGGPITVHGDLKVALA 725
Query: 197 C 197
C
Sbjct: 726 C 726
>gi|108864374|gb|ABA93602.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1761
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 13/136 (9%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 759 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSEL 818
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 819 KPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALA 878
Query: 164 KMRAVPSTCHQVLCYQ 179
K AVP + + Q
Sbjct: 879 KFMAVPHYTYTIRTRQ 894
>gi|32488502|emb|CAE03254.1| OSJNBa0011J08.9 [Oryza sativa Japonica Group]
Length = 878
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 18/150 (12%)
Query: 40 NHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVN 91
N P + SE++ +K +S H D LV+ + + N ++R LID GS++N
Sbjct: 729 NTPQYLRWSEIA-----IKFDRSDHPDRVVHPGRYPLVLDLVVRNVKLRRTLIDGGSALN 783
Query: 92 ILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLV 146
IL T++ M++ + ++K P G + G+ G IT+ V + T+ F V
Sbjct: 784 ILFAKTLDDMQIPRTELKPSNAPFHGVIPGLSATPLGQITIPVTFGTRENFRTENICFEV 843
Query: 147 VKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ Y+ ILGR + K AVP + ++
Sbjct: 844 ADFETAYHAILGRPALAKFMAVPHYTYMMM 873
>gi|19920096|gb|AAM08528.1|AC068654_30 Hypothetical protein with similarity to putative retroelement
[Oryza sativa Japonica Group]
Length = 548
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V +L+D GSS+N+L +T++ M + + ++ +QP G++ ++
Sbjct: 354 IVVEPTIRNIKVALVLVDGGSSINLLFASTLDAMGIPRSELTPTDQPFHGITPQSSSKPL 413
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V ++ + T F V + + YN I+GR + K A ++VL
Sbjct: 414 GKITLPVTFGQASNFRTKQITFHVAEFDTAYNAIIGRTALVKFMAASHYAYEVLKMPGPK 473
Query: 183 GIEEIRGDQATAWAC 197
G I+G+ A C
Sbjct: 474 GTITIQGNAKLAVQC 488
>gi|50540733|gb|AAT77889.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108710909|gb|ABF98704.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1851
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 13/181 (7%)
Query: 29 AIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVK 80
++ KR L + P E+ V + L Q+ H A+V+S + N +
Sbjct: 566 SLKAMKRELLAAAPTHEATRRVRWSEVALTFDQTDHPPCVARGGQIAMVVSPTVCNVKLG 625
Query: 81 RILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AK 136
R+LID G+++NIL A + ++ ++ QP+IG++ T G I L V A
Sbjct: 626 RVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSAN 684
Query: 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
+ DF V + PYN +LGR + K AV + + G + GD A A
Sbjct: 685 FRTEQVDFDVADLSMPYNAVLGRPALVKFMAVVHYAYLQMKMPGPGGPITVHGDLKVALA 744
Query: 197 C 197
C
Sbjct: 745 C 745
>gi|147765948|emb|CAN60602.1| hypothetical protein VITISV_022279 [Vitis vinifera]
Length = 1046
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 51/98 (52%)
Query: 79 VKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSY 138
V +++DNGS++NI AT + F Q + G + + ++
Sbjct: 196 VLSVILDNGSALNICPLATTIALGYASSDFGPFTQTVKAYDNTKREVIGTLEIELLIGLT 255
Query: 139 SLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
T F V++ + +N++LGR +IH++RA+PS+ HQ++
Sbjct: 256 IFPTMFQVLRIPTSFNLLLGRPYIHRVRAIPSSLHQMV 293
>gi|359484844|ref|XP_003633174.1| PREDICTED: uncharacterized protein LOC100855346 [Vitis vinifera]
Length = 1966
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 56/125 (44%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 388 IVFSDDDLPPEGSGHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 447
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR IH+ A+P
Sbjct: 448 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPRIHRAGAIP 507
Query: 170 STCHQ 174
S+ HQ
Sbjct: 508 SSLHQ 512
>gi|15217240|gb|AAK92584.1|AC074354_18 Putative retroelement [Oryza sativa Japonica Group]
Length = 1705
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 54/124 (43%), Gaps = 4/124 (3%)
Query: 49 EVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
++SF D + + PH D LVIS +I V+RIL+D SS +++ KM L I
Sbjct: 639 QISFGLGDAEGVMFPHQDPLVISAEIAGFEVRRILVDGESSADVIFAEAYAKMGLTTQAI 698
Query: 109 KLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHK 164
L G G G L+V + + F VV YN I GR ++K
Sbjct: 699 TPAPALLRGFGGEAVQVLGQAQLMVAFGTGENRREEQVLFDVVDIPYNYNAIFGRATLNK 758
Query: 165 MRAV 168
A+
Sbjct: 759 FEAI 762
>gi|19920117|gb|AAM08549.1|AC092749_2 Hypothetical protein with similarity to putative retroelement
[Oryza sativa Japonica Group]
gi|21672074|gb|AAM74436.1|AC123594_19 Hypothetical protein similar to putative retroelements [Oryza
sativa Japonica Group]
gi|31431423|gb|AAP53204.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 483
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSD 126
LV+ + N ++R LID GS++NIL T++ M++ + ++K P + G+ +
Sbjct: 287 LVLDPVVRNVKLRRSLIDGGSALNILFAKTLDDMQIPRTELKPSSAPFHRFIPGLSSTPL 346
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITLLV + T+ F V + Y+ ILGR + K VP ++++
Sbjct: 347 GQITLLVTFGTRENFRTENICFEVADFETAYHAILGRPALAKFMVVPHYIYRMMKMPGPR 406
Query: 183 GIEEIRGDQATAWAC 197
G+ +R D C
Sbjct: 407 GVISLRSDIKQTVTC 421
>gi|147823143|emb|CAN73027.1| hypothetical protein VITISV_016263 [Vitis vinifera]
Length = 2270
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 53/113 (46%)
Query: 62 SPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGI 121
S H L + + V +L+DNGS++N+ AT + Q +
Sbjct: 569 SNHTRPLYTFVGCSSRRVPTVLLDNGSTLNVCPLATTIVLGYVPSNFSPSTQTVHLYDST 628
Query: 122 VTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
G + + ++ + +T F V++ + +N++LGR WIHK R +PS+ HQ
Sbjct: 629 RREVMGTLEIELLIGLATFVTVFQVLRIPTSFNLLLGRPWIHKARPIPSSLHQ 681
>gi|116309688|emb|CAH66736.1| H0404F02.12 [Oryza sativa Indica Group]
Length = 780
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 18/150 (12%)
Query: 40 NHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVN 91
N P + SE++ +K +S H D LV+ + + N ++R LID GS++N
Sbjct: 631 NTPQYLRWSEIA-----IKFDRSDHPDRVVHPGRYPLVLDLVVRNVKLRRTLIDGGSALN 685
Query: 92 ILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLV 146
IL T++ M++ + ++K P G + G+ G IT+ V + T+ F V
Sbjct: 686 ILFAKTLDDMQIPRTELKPSNAPFHGVIPGLSATPFGQITIPVTFGTRENFRTENICFEV 745
Query: 147 VKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ Y+ ILGR + K AVP + ++
Sbjct: 746 ADFETAYHAILGRLALTKFMAVPHYTYMMM 775
>gi|50838904|gb|AAT81665.1| putative retrotransposon protein [Oryza sativa Japonica Group]
gi|108709836|gb|ABF97631.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 2784
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 6/171 (3%)
Query: 33 FKRGLPSNHPFFESLSEVSFLPQD-LKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVN 91
FK L + ++ FL D K +P +V+ I N V +LID GSS++
Sbjct: 249 FKNALTKQLALEKGKRKIEFLEADHPKTPVTPGRYPIVVEPTIRNIKVAWVLIDGGSSID 308
Query: 92 ILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD-GVITLLV-IAKSYSLLTD---FLV 146
+L +T++ M + + ++ +Q G++ ++ G ITL V ++ + T+ F V
Sbjct: 309 LLFASTLDAMGIPRSELTPTDQTFHGITPQSSSKPLGKITLPVTFGQANNFRTEQITFDV 368
Query: 147 VKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
+ + YN I+GR + K A HQVL G I+G+ C
Sbjct: 369 AEFDTTYNAIIGRNALAKFMAASHYAHQVLKMPGPKGTITIQGNTKLVVQC 419
>gi|147853704|emb|CAN79568.1| hypothetical protein VITISV_005820 [Vitis vinifera]
Length = 246
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H DALV+++ + V +ILID GSS ++L +T +M ++ + L +G T
Sbjct: 150 HGDALVLTLGVNGFDVHKILIDLGSSTDLLQMSTYRQMGYFPSALENIVRILTNFNGAST 209
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGR 159
S G + LLV +L F VV+ SPYN +G
Sbjct: 210 VSLGNVILLVQVSPITLNVRFSVVEDLSPYNTTMGH 245
>gi|62732751|gb|AAX94870.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|77549365|gb|ABA92162.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 498
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S + N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 43 AMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPL 101
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V S + T+ F V + PYN +LGR + K A + +
Sbjct: 102 GHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPG 161
Query: 183 GIEEIRGDQATAWAC 197
G + GD A AC
Sbjct: 162 GPISVHGDLKVALAC 176
>gi|147864331|emb|CAN83000.1| hypothetical protein VITISV_003694 [Vitis vinifera]
Length = 184
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 127 GVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
G+I L ++ S T F V+ A + YNV+LGR W+H+ A+PST HQ C++ G
Sbjct: 79 GMIRLRLVTGELSSNTLFYVIDAKTSYNVLLGRPWLHENGAIPSTLHQ--CFKFYKG 133
>gi|110289223|gb|AAP54205.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1734
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 75/171 (43%), Gaps = 18/171 (10%)
Query: 40 NHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVN 91
N P + SE + +K +S H D LV+ + N ++R LID GS++N
Sbjct: 635 NTPQYLQWSETA-----IKFDRSDHPDRVVHPGWYPLVLDPVVRNVKLRRTLIDGGSALN 689
Query: 92 ILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLV 146
IL T++ M++ + ++K P G + G+ G ITL V + T+ F V
Sbjct: 690 ILFAKTLDDMQIPRTELKPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENVCFEV 749
Query: 147 VKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
Y+ IL R + K AVP + ++ G+ +R D A C
Sbjct: 750 ADFEIAYHAILRRPALAKFMAVPHYTYMMMKMSGPRGVISLRSDIKQAVTC 800
>gi|19881697|gb|AAM01098.1|AC098682_2 Putative retroelement [Oryza sativa Japonica Group]
gi|31431128|gb|AAP52950.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1367
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 54/124 (43%), Gaps = 4/124 (3%)
Query: 49 EVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
++SF D + + PH D LVIS +I V+RIL+D SS +++ KM L I
Sbjct: 497 QISFGLGDAEGVMFPHQDPLVISAEIAGFEVRRILVDGESSADVIFAEAYAKMGLTTQAI 556
Query: 109 KLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHK 164
L G G G L+V + + F VV YN I GR ++K
Sbjct: 557 TPAPALLRGFGGEAVQVLGQAQLMVAFGTGENRREEQVLFDVVDIPYNYNAIFGRATLNK 616
Query: 165 MRAV 168
A+
Sbjct: 617 FEAI 620
>gi|147820124|emb|CAN60550.1| hypothetical protein VITISV_040254 [Vitis vinifera]
Length = 1494
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I++ V +L+DNGS++N+ AT + Q +
Sbjct: 23 HVHPLYITVGCSGHRVSSVLLDNGSALNVCPLATAIALGFAPSDFGPSTQTVRAYDSTKR 82
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
G + + + + T F V++ + +N++LGR WIH + A+PS+ HQ
Sbjct: 83 EVMGTLMIDLHIGPATFSTLFQVLRIPTSFNLLLGRPWIHVVGAIPSSLHQ 133
>gi|13489188|gb|AAK27822.1|AC022457_25 putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 1720
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 75/171 (43%), Gaps = 18/171 (10%)
Query: 40 NHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVN 91
N P + SE + +K +S H D LV+ + N ++R LID GS++N
Sbjct: 600 NTPQYLQWSETA-----IKFDRSDHPDRVVHPGWYPLVLDPVVRNVKLRRTLIDGGSALN 654
Query: 92 ILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLV 146
IL T++ M++ + ++K P G + G+ G ITL V + T+ F V
Sbjct: 655 ILFAKTLDDMQIPRTELKPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENVCFEV 714
Query: 147 VKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
Y+ IL R + K AVP + ++ G+ +R D A C
Sbjct: 715 ADFEIAYHAILRRPALAKFMAVPHYTYMMMKMSGPRGVISLRSDIKQAVTC 765
>gi|77552906|gb|ABA95702.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1619
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S + N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 398 AMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPL 456
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V S + T+ F V + PYN +LGR + K A + +
Sbjct: 457 GHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPG 516
Query: 183 GIEEIRGDQATAWAC 197
G + GD A AC
Sbjct: 517 GPISVHGDLKVALAC 531
>gi|19551092|gb|AAL91597.1|AC099400_3 Putative gag-pol precursor [Oryza sativa Japonica Group]
gi|31429752|gb|AAP51761.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 586
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 6/138 (4%)
Query: 46 SLSEVSFLPQD-LKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLE 104
S ++ FL +D K P +V+ I N V R+LID GSS+N+L + ++ M +
Sbjct: 405 SEQKIEFLEEDHPKTAVIPRRYPIVVEPTIRNIKVARVLIDGGSSINLLFASALDAMGIP 464
Query: 105 QDKIKLFEQPLIGLSGIVTNSD-GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGR 159
+ ++ +QP G++ ++ G IT V ++ + T+ F VV+ + YN I+GR
Sbjct: 465 RSELTPTDQPFHGITPQSSSKPLGKITSPVTFGQANNFRTEQITFDVVEFDTAYNAIIGR 524
Query: 160 QWIHKMRAVPSTCHQVLC 177
+ K +QVL
Sbjct: 525 TALAKFMVASHYAYQVLS 542
>gi|218190632|gb|EEC73059.1| hypothetical protein OsI_07016 [Oryza sativa Indica Group]
Length = 537
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 13/178 (7%)
Query: 32 TFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRIL 83
KR L + P E++ + L Q+ H A+V+S I N + R+L
Sbjct: 298 AMKRELLAAAPTHEAMRRARWSEVALTFDQTDHPPCVARGGQIAMVVSPTICNVKLGRVL 357
Query: 84 IDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AKSYS 139
ID G+++NIL A + ++ ++ QP+IG++ T G I L V A +
Sbjct: 358 IDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGPANFRT 416
Query: 140 LLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
+F V + PYN +LGR + K A + + G + GD A AC
Sbjct: 417 ERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPSGPISVHGDLKVALAC 474
>gi|38346851|emb|CAD39933.2| OSJNBa0091C12.11 [Oryza sativa Japonica Group]
Length = 1992
Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 34 KRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILID 85
KR L + P E++ + L Q+ H A+V+S I N + R+LID
Sbjct: 572 KRELLTMAPTHEAMRRARWSEVALTFDQTDHPPCIARGGQVAMVVSPTICNVKLGRVLID 631
Query: 86 NGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AKSYSLL 141
G+++NIL A + ++ ++ QP+IG++ T G I L V A +
Sbjct: 632 GGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPLGHIDLPVTFGGPANFRTER 690
Query: 142 TDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
F VV + PYN +LGR + K A + + G +RGD A AC
Sbjct: 691 VSFDVVDLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPGGPISVRGDLKVALAC 746
>gi|16924036|gb|AAL31648.1|AC079179_3 Putative polyprotein [Oryza sativa]
gi|17047042|gb|AAL34947.1|AC079037_20 Putative polyprotein [Oryza sativa]
gi|31429902|gb|AAP51891.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1210
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S + N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 490 AMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPL 548
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V S + T+ F V + PYN +LGR + K A + +
Sbjct: 549 GHINLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPTLVKFMAAVHYAYLQMKMPGPG 608
Query: 183 GIEEIRGDQATAWAC 197
G + GD A AC
Sbjct: 609 GPISVHGDLKVALAC 623
>gi|147805667|emb|CAN67275.1| hypothetical protein VITISV_042514 [Vitis vinifera]
Length = 501
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 4/122 (3%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F P D + PH+D LV+++ +G V ILID GS VN+L + +M ++
Sbjct: 76 IAFSPIDSNRVILPHEDVLVLTLGVGGFDVHIILIDLGSFVNLLQMSAYRQMGYSLSALE 135
Query: 110 LFEQPLIGLSG--IVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRA 167
+ L +G IV+ D ++T+ V + ++L F +V+ SPYN I HK+
Sbjct: 136 NPGRILTSFNGASIVSLGDDILTVQVDPITLNVL--FSIVEDLSPYNEIDPFVVTHKLNI 193
Query: 168 VP 169
+P
Sbjct: 194 LP 195
>gi|55168030|gb|AAV43898.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1190
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 13/181 (7%)
Query: 29 AIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVK 80
++ KR L + P E+ + L Q+ H A+V+S + N +
Sbjct: 566 SLKAMKRELLAAAPTHEATRRARWSEVALTFDQTDHTPCVARGGQIAMVVSPTVCNVKLG 625
Query: 81 RILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AK 136
R+LID G+++NIL A E ++ ++ QP+IG++ T G I L V A
Sbjct: 626 RVLIDGGAALNILSPAAFEAIKAPGMVLRP-SQPIIGVTPGHTRPLGHIDLPVTFGGSAN 684
Query: 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
+ DF V + PYN +LGR + K A + + G + GD A A
Sbjct: 685 FRTERVDFDVADLSLPYNAVLGRPSLVKFMAAVHYAYLQMKMPGSGGPITVHGDLKVALA 744
Query: 197 C 197
C
Sbjct: 745 C 745
>gi|147867434|emb|CAN81175.1| hypothetical protein VITISV_000818 [Vitis vinifera]
Length = 1118
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%)
Query: 56 DLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPL 115
DL S H L I + V +L+DNGS++N+ AT + K L Q +
Sbjct: 324 DLPPEGSDHTCPLYIIVGCSGHRVPSVLLDNGSALNVHPLATTIALGYASSKFGLSTQMV 383
Query: 116 IGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
G + + ++ + T F V++ + +N++LG+ WIH+ +PS+ H+
Sbjct: 384 RAYDSTKGEVVGTLMIELLIGPATFSTLFQVLRIPTFFNLLLGQPWIHRAGVIPSSLHR 442
>gi|77550764|gb|ABA93561.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 682
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 5/126 (3%)
Query: 56 DLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPL 115
D K +P +V+ I N R+LID GSS+N+ +T++ M + + ++ +QP
Sbjct: 546 DPKTAVTPGRYPIVVEPTIRNIKFARVLIDGGSSINLHFASTLDAMGIPRSELTPTDQPF 605
Query: 116 IGLSGIVTNSD-GVITL-LVIAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPS 170
G++ ++ G ITL + +++ + T+ F V + + YN I+GR + K A
Sbjct: 606 HGITPQSSSKPLGKITLPMTFSQANNFRTEQITFDVAEFDTAYNAIIGRIALAKFMAASH 665
Query: 171 TCHQVL 176
+Q+L
Sbjct: 666 YAYQIL 671
>gi|147776753|emb|CAN61427.1| hypothetical protein VITISV_031730 [Vitis vinifera]
Length = 2196
Score = 49.7 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 55/125 (44%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +J+DN S++N+ AT +
Sbjct: 706 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSVJLDNXSALNVCPLATAIALGYAPSDFG 765
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q + G + + ++ + + F V++ + +N++LGR WIH+ A+P
Sbjct: 766 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 825
Query: 170 STCHQ 174
S HQ
Sbjct: 826 SXLHQ 830
>gi|32487383|emb|CAE03136.1| OJ000114_01.17 [Oryza sativa Japonica Group]
Length = 1916
Score = 49.7 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 13/181 (7%)
Query: 29 AIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVK 80
++ KR L + P E+ + L Q+ H A+V+S + N +
Sbjct: 509 SLKAMKRELLAAAPTHEATRRARWSEVALTFDQTDHPPCVARGGQIAMVVSPTVCNVKLG 568
Query: 81 RILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AK 136
R+LID G+++NIL A + ++ ++L QP+IG++ T G I L V A
Sbjct: 569 RVLIDGGAALNILSPAAFDAIKAPGMVLRL-SQPIIGVTPGHTWPLGHIDLPVTFGGSAN 627
Query: 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
+ +F V + PYN +LGR + K A + + + G + GD A A
Sbjct: 628 FRTERVNFDVADLSLPYNAVLGRPALVKFMAALHYAYLQMKMPGLGGPISVHGDLKVALA 687
Query: 197 C 197
C
Sbjct: 688 C 688
>gi|147815585|emb|CAN65973.1| hypothetical protein VITISV_000704 [Vitis vinifera]
Length = 703
Score = 49.7 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 77 CLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVIT--LLVI 134
C V +L+DNGS++N+ T + Q + G G +T +++
Sbjct: 387 CRVPSVLLDNGSALNVYPLVTAIALGFSPSDFGSSTQTVRAYDGTQRTVMGTLTTHVMIG 446
Query: 135 AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
YS+L F V++ S +N++LG WIH+ +PS+ HQ
Sbjct: 447 PVRYSIL--FQVLRIQSSFNLLLGHPWIHEAGVIPSSLHQ 484
>gi|77551564|gb|ABA94361.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1342
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 647 IKFDRSDHPDRVVHPGRYPLVLDPMVRNVKLRRSLIDGGSALNILFAKTLDDMQIPRTEL 706
Query: 109 KLFEQPLIGLSGIVTNSD-GVITLLVIAKSYSLL----TDFLVVKATSPYNVILGRQWIH 163
K P + ++ + G ITL V + F V +PY+ ILGR +
Sbjct: 707 KPSNTPFHRVIPRLSATPLGQITLPVTFGTRENFRIENVCFEVADFETPYHAILGRPALA 766
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 767 KFMAVPHYTYMMMKMPGPRGVISLRSDIKQAVTC 800
>gi|54291807|gb|AAV32176.1| putative polyprotein [Oryza sativa Japonica Group]
gi|55168086|gb|AAV43954.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1230
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S + N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 612 AMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPL 670
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V S + T+ F V + PYN +LGR + K A + +
Sbjct: 671 GHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPG 730
Query: 183 GIEEIRGDQATAWAC 197
G + GD A AC
Sbjct: 731 GPISVHGDLKVALAC 745
>gi|147821872|emb|CAN68212.1| hypothetical protein VITISV_004060 [Vitis vinifera]
Length = 328
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++FLP L + PH++AL++ + + + RIL+D GSS ++L +M ++
Sbjct: 201 ITFLPIYLNRVLQPHEEALILKLGVDEFDLLRILVDPGSSTDLLQMLAYRQMGYSPSALE 260
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVIL 157
+ L G +G T S G + L V A +L F ++ A Y V L
Sbjct: 261 NPGRLLSGFNGATTTSLGNVVLPVQANPITLSMQFSMLAALQWYQVAL 308
>gi|62734445|gb|AAX96554.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550443|gb|ABA93240.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1701
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M + + ++
Sbjct: 635 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMLIPRSEL 694
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F + + Y+ ILGR +
Sbjct: 695 KSSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENICFQIADFETAYHAILGRPALA 754
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ + D A C
Sbjct: 755 KFMAVPYYTYMMMKMPGPQGVLSLWSDIKQAVTC 788
>gi|255552457|ref|XP_002517272.1| conserved hypothetical protein [Ricinus communis]
gi|223543535|gb|EEF45065.1| conserved hypothetical protein [Ricinus communis]
Length = 127
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F + + I + H+DALV+ I N LV+ ILID+ SS+N++ M L+ + +
Sbjct: 39 IKFSDANSQGILNSHNDALVVKAYINNFLVRWILIDDKSSINMITMPVFLSMGLKHNHLT 98
Query: 110 LFEQPLIGLSGIVTNSDGVITL 131
L P IGL G +G I L
Sbjct: 99 LVSTPFIGLGGKTILVEGSIHL 120
>gi|38344604|emb|CAD39962.2| OSJNBa0072D08.9 [Oryza sativa Japonica Group]
Length = 880
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 11/127 (8%)
Query: 58 KLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG 117
K + +P +V+ I N V R+LID G+S+N+L T++ M + + ++ +QP
Sbjct: 727 KTVVTPGRYPIVVEPTIRNIKVARVLIDGGNSINLLFANTLDAMGILRSELTPTDQP--- 783
Query: 118 LSGIVTNSD----GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVP 169
GI+ S G ITL V ++ + T+ F V + + YN I+GR + K A
Sbjct: 784 FHGIIPQSSSKPLGKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFMAAS 843
Query: 170 STCHQVL 176
+QVL
Sbjct: 844 YYAYQVL 850
>gi|108864359|gb|ABA93438.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1129
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V R+LID+ SS+N+L + ++ M + + ++ +QP G++ ++
Sbjct: 94 IVVEPTIRNIKVARVLIDDRSSINLLFASALDAMGIPRSELTPTDQPFHGITPQSSSKPL 153
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V ++ + T+ F V + + YN I+GR + K A +QVL
Sbjct: 154 GKITLPVTFDQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFMAASHYAYQVLKMPGPK 213
Query: 183 GIEEIRGDQATAWAC 197
G I+G A C
Sbjct: 214 GTITIQGYTKLAVQC 228
>gi|147835075|emb|CAN67948.1| hypothetical protein VITISV_002484 [Vitis vinifera]
Length = 484
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM 101
F P D K I PH DAL++S+++G+ V+RIL+D GSS ++L + + M
Sbjct: 379 FPPIDPKRILQPHRDALILSLEMGDFDVRRILVDPGSSADLLQASVISHM 428
>gi|224056907|ref|XP_002299083.1| predicted protein [Populus trichocarpa]
gi|222846341|gb|EEE83888.1| predicted protein [Populus trichocarpa]
Length = 180
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
Query: 78 LVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAK- 136
+V RIL+D+ + VNIL + K+ + K+ L P IG+ V G I L V
Sbjct: 5 MVYRILVDHDNLVNILLAEAMTKIGIHASKMALVLTPFIGIEKSVMPVKGAIELTVTVGI 64
Query: 137 ---SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQ 191
++ F+V+ N I+ R +H++ A+ ST + + + T+ G+ ++G+Q
Sbjct: 65 APYCVTIQHTFMVIITHLLCNAIIRRPLLHQISAMVSTKYLTMKFPTVKGVAAMKGNQ 122
>gi|62734463|gb|AAX96572.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
gi|77552665|gb|ABA95462.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 2027
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 34 KRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILID 85
KR L + P E++ + L Q+ H A+V+S I N + R+LID
Sbjct: 571 KRELLAMAPTHEAMRRARWSEVALTFDQTDHPPCIARGGQVAMVVSPTICNVKLGRVLID 630
Query: 86 NGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AKSYSLL 141
G+++NIL A + ++ ++ QP+IG++ T G I L V A +
Sbjct: 631 GGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGPANFRTER 689
Query: 142 TDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
F V + PYN +LGR + K A + + G +RGD A AC
Sbjct: 690 VSFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGAGGPISVRGDLKVALAC 745
>gi|4115365|gb|AAD03367.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1329
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 127 GVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
G + L V A+ + +F V + YNVILG W+++M+ VPST HQ + + T G
Sbjct: 354 GTVVLPVTAQGVVKMVEFTVFDRPAAYNVILGTPWLYEMKVVPSTYHQCVKFPTPVG 410
>gi|108709277|gb|ABF97072.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1590
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D ++VN++ T K+ R +D IK L
Sbjct: 772 HLKPLYINGYVNEKPMSKMMVDGRAAVNLMPYTTFRKLGRNAEDLIKT-NMVLKDFGSNP 830
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + GV+ + + + ++ T F V+ Y+++ GR WIH +PST HQ L
Sbjct: 831 SETKGVLNVELTVGNKTIPTMFFVIDGKGSYSLLRGRDWIHANCCIPSTMHQCL 884
>gi|77552008|gb|ABA94805.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1659
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 13/181 (7%)
Query: 29 AIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVK 80
++ T KR L + P E+ + L Q+ H A+V+S + N +
Sbjct: 273 SLKTMKRELLAAAPTHEATRRARWSEVALTFDQTDHPPYVARGGQIAMVVSPTVCNVKLG 332
Query: 81 RILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AK 136
R+LID G+++NIL A + ++ ++ QP+IG++ T G I L V A
Sbjct: 333 RVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPQGHIDLPVTFGGSAN 391
Query: 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
+ +F V + PYN +LGR + K A + + G + GD A A
Sbjct: 392 FRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPSGPISVHGDLKVALA 451
Query: 197 C 197
C
Sbjct: 452 C 452
>gi|38344136|emb|CAE01816.2| OSJNBa0041A02.3 [Oryza sativa Japonica Group]
gi|38345781|emb|CAD41821.2| OSJNBa0083N12.19 [Oryza sativa Japonica Group]
Length = 2027
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S I N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 612 AMVVSPTICNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPL 670
Query: 127 GVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V A + +F V + PYN +LGR + K A + ++
Sbjct: 671 GHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLLMKMPGPG 730
Query: 183 GIEEIRGDQATAWAC 197
G +RGD A AC
Sbjct: 731 GPISVRGDLKVALAC 745
>gi|359488408|ref|XP_003633755.1| PREDICTED: uncharacterized protein LOC100852570 [Vitis vinifera]
Length = 2061
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 50/111 (45%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I++ V +L+DNGS++N+ AT + Q +
Sbjct: 582 HVRPLYITVGCSGRRVPSVLLDNGSALNVCPLATAIALGFAPSDFGPSTQTVRAYDSTKR 641
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
G + + + + T F V++ + +N++LGR WIH A+PS+ HQ
Sbjct: 642 EVMGTLMIDLQIGPATFSTLFQVLRIPASFNLLLGRPWIHVAGAIPSSLHQ 692
>gi|147860822|emb|CAN78906.1| hypothetical protein VITISV_006738 [Vitis vinifera]
Length = 462
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D I PH DAL++S++IG+ V+RIL+D GSS N++ V M ++
Sbjct: 369 FPPADPTRILQPHRDALILSLEIGDFDVRRILVDPGSSANLVQALVVSYMGHSLTGLENP 428
Query: 112 EQPLIGLSGIVTNSDGVITL 131
+ L +G DG I L
Sbjct: 429 RRILSRFNGSFLTKDGQIDL 448
>gi|38344641|emb|CAE05074.2| OSJNBa0094P09.13 [Oryza sativa Japonica Group]
Length = 2027
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 34 KRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILID 85
KR L + P E++ + L Q+ H A+V+S I N + R+LID
Sbjct: 571 KRELLAMAPTHEAMRRARWSEVALTFDQTDHPPCVARGGQIAMVVSPTICNVKLGRVLID 630
Query: 86 NGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AKSYSLL 141
G+++NIL A + ++ ++ QP+IG++ T G I L V A +
Sbjct: 631 GGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPLGHIDLSVTFGGSANFRTER 689
Query: 142 TDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
+F V + PYN +LGR + K A + + G +RGD A AC
Sbjct: 690 VNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPGGPISVRGDLKVALAC 745
>gi|147865111|emb|CAN79817.1| hypothetical protein VITISV_006609 [Vitis vinifera]
Length = 2155
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 28/128 (21%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNIL---DDATVEKMRLEQD 106
+ F DL S H L IS+ V +L+DNGS++N + D E M
Sbjct: 410 IVFSDDDLPSEGSDHTRPLYISVGCSGRRVPSVLLDNGSALNTIRAYDSTRREVM----- 464
Query: 107 KIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMR 166
G + + ++ + +T F V++ + +N++LGR WIH++
Sbjct: 465 --------------------GTLEIELLIGPATFVTVFQVLRIPTSFNLLLGRPWIHRVG 504
Query: 167 AVPSTCHQ 174
+PS+ HQ
Sbjct: 505 VIPSSLHQ 512
>gi|359490135|ref|XP_003634039.1| PREDICTED: uncharacterized protein LOC100249206 [Vitis vinifera]
Length = 2085
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 50/111 (45%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I++ V +L+DNGS++N+ AT + Q +
Sbjct: 641 HVRPLYITVGCSGRRVPSVLLDNGSALNVCPLATAIALGFAPSDFGPSTQTVRAYDSTKR 700
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
G + + + + T F V++ + +N++LGR WIH A+PS+ HQ
Sbjct: 701 EVMGTLMIDLQIGPATFSTLFQVLRIPASFNLLLGRPWIHVAGAIPSSLHQ 751
>gi|147778034|emb|CAN69736.1| hypothetical protein VITISV_041904 [Vitis vinifera]
Length = 1633
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 50/111 (45%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I++ V +L+DNGS++N+ AT + Q +
Sbjct: 192 HVRPLYITVGCSGRRVPSVLLDNGSALNVCPLATAIALGFAPSDFGPSTQTVRAYDSTKR 251
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
G + + + + T F V++ + +N++LGR WIH A+PS+ HQ
Sbjct: 252 EVMGTLMIDLQIGPATFSTLFQVLRIPASFNLLLGRPWIHVAGAIPSSLHQ 302
>gi|14018089|gb|AAK52152.1|AC084831_6 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1538
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM-RLEQDKIKLFEQPLIGLSGIV 122
H L I+ + + ++++D ++VN++ T K+ R +D IK L
Sbjct: 720 HLKPLYINGYVNEKPMSKMMVDGRAAVNLMPYTTFRKLGRNAEDLIKT-NMVLKDFGSNP 778
Query: 123 TNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
+ + GV+ + + + ++ T F V+ Y+++ GR WIH +PST HQ L
Sbjct: 779 SETKGVLNVELTVGNKTIPTMFFVIDGKGSYSLLRGRDWIHANCCIPSTMHQCL 832
>gi|147772419|emb|CAN69538.1| hypothetical protein VITISV_021002 [Vitis vinifera]
Length = 495
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG+ V+RIL+D GSS +++ + + M +
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHM---GHSLAGL 435
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIA 135
E P L G +G T S G I L V A
Sbjct: 436 ENPGRILSGFNGSSTTSLGDIILPVRA 462
>gi|54287566|gb|AAV31310.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 2027
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 34 KRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILID 85
KR L + P E++ + L Q+ H A+V+S I N + R+LID
Sbjct: 571 KRELLAMAPTHEAMRRARWSEVALTFDQTDHPPCIARGGQVAMVVSPTICNVKLGRVLID 630
Query: 86 NGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AKSYSLL 141
G+++NIL A + ++ ++ QP+IG++ T G I L V A +
Sbjct: 631 GGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPLGHIDLPVTFGGSANFRTER 689
Query: 142 TDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
+F V + PYN +LGR + K A + + G +RGD A AC
Sbjct: 690 VNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPGGPISVRGDLKVALAC 745
>gi|32483247|emb|CAE02548.1| OSJNBb0069N01.14 [Oryza sativa Japonica Group]
Length = 722
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Query: 32 TFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRIL 83
T +R L + P E+ + + L QS H ALV+S I N +KR+L
Sbjct: 307 TMRRELLAAVPTHEAARKARWSEVKLTFDQSDHPTVLTRGGKLALVVSPTIHNVKMKRVL 366
Query: 84 IDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITL-LVIAKSYSLLT 142
+D G+S++I+ AT + ++ K++ P+IG++ G + L L S + T
Sbjct: 367 VDEGASLSIISPATFDALKAPGMKLQP-SLPIIGVTPGHRWPLGHVELPLTFGDSTNFRT 425
Query: 143 ---DFLVVKATSPYNVILGRQWIHKMRAV 168
DF V PYN +LGR + K A
Sbjct: 426 ERIDFDVADLNLPYNAVLGRPSLVKFMAA 454
>gi|77552214|gb|ABA95011.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 2028
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 34 KRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILID 85
KR L + P E++ + L Q+ H A+V+S I N + R+LID
Sbjct: 572 KRELLAMAPTHEAMRRARWSEVALTFDQTDHPPCIARGGQVAMVVSPTICNVKLGRVLID 631
Query: 86 NGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AKSYSLL 141
G+++NIL A + ++ ++ QP+IG++ T G I L V A +
Sbjct: 632 GGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPLGHIDLPVTFGGPANFRTER 690
Query: 142 TDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
F V + PYN +LGR + K A + + G +RGD A AC
Sbjct: 691 VSFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMSGPGGPISVRGDLKVALAC 746
>gi|147804865|emb|CAN78055.1| hypothetical protein VITISV_001308 [Vitis vinifera]
Length = 1901
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I++ V +L+DNGS++N+ AT + Q +
Sbjct: 689 HVRPLYITVGCSGRRVPSVLLDNGSALNVCPLATAIALGFAPSDFGPSTQTVRAYDSTKR 748
Query: 124 NSDG--VITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
G VI L + +S L F V++ + +N++LGR WIH A+PS+ HQ
Sbjct: 749 EVMGTLVIDLQIGPTRFSTL--FQVLRIPTSFNLLLGRPWIHVAGAIPSSLHQ 799
>gi|32489193|emb|CAE04378.1| OSJNBa0027G07.20 [Oryza sativa Japonica Group]
gi|38347087|emb|CAE02559.2| OSJNBa0006M15.2 [Oryza sativa Japonica Group]
Length = 462
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S I N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 266 AMVVSPTICNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPL 324
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V S + T+ F V + PYN +LGR + K A + +
Sbjct: 325 GHIDLPVNFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMSGPG 384
Query: 183 GIEEIRGDQATAWAC 197
G + GD A AC
Sbjct: 385 GPITVHGDLQVALAC 399
>gi|52353673|gb|AAU44239.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1568
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 5/136 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
AL++S I N +KR+L+D G+S++I+ A + ++ K++ P+IG++ T
Sbjct: 511 ALLVSPTIYNVKIKRVLVDGGASLSIISPAAFDALKAPGMKLQP-SLPIIGVTPGHTWPL 569
Query: 127 GVITLLV-IAKSYSLLT---DFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G + L V S + T DF V PYN +LGR + K A + +
Sbjct: 570 GHVELPVTFGDSTNFRTERIDFDVADLNHPYNAVLGRPALVKFMAATHYAYLQMKMPGPA 629
Query: 183 GIEEIRGDQATAWACA 198
G I GD A ACA
Sbjct: 630 GPITIFGDVKVALACA 645
>gi|147770279|emb|CAN65082.1| hypothetical protein VITISV_012370 [Vitis vinifera]
Length = 1734
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 79 VKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAK-- 136
V +L+DNGS++++ + D Q + G G ++ V+
Sbjct: 342 VPSVLLDNGSALSVCPLVIAIALGFSPDDFGPSTQTVRAYDGTQRTVMGTLSTHVMIGLV 401
Query: 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
SYS++ F V++ S +N++LGR WIH+ A+PS+ HQ
Sbjct: 402 SYSIV--FQVLRIQSSFNLLLGRPWIHEAGAIPSSLHQ 437
>gi|53749265|gb|AAU90124.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1796
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 13/181 (7%)
Query: 29 AIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVK 80
++ KR L + P E+ + L Q+ H A+V+S + N +
Sbjct: 577 SLKAMKRELLAAAPTHEATRRARWSEVALTFDQTDHPPCVARGGQIAMVVSPTVCNVKLG 636
Query: 81 RILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AK 136
R+LID G+++NIL A + ++ ++ QP+IG++ T G I L V A
Sbjct: 637 RVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSAN 695
Query: 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
+ DF V + PYN +LGR + K A + + G+ + GD A A
Sbjct: 696 FRTERVDFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPGGLITVHGDLKVALA 755
Query: 197 C 197
C
Sbjct: 756 C 756
>gi|297721157|ref|NP_001172941.1| Os02g0455725 [Oryza sativa Japonica Group]
gi|255670866|dbj|BAH91670.1| Os02g0455725 [Oryza sativa Japonica Group]
Length = 752
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 37/71 (52%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF P+D + + PH D LVIS +I V+RIL+D GSS +++ KM L +
Sbjct: 428 ISFRPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALT 487
Query: 110 LFEQPLIGLSG 120
L G G
Sbjct: 488 PAPASLRGFGG 498
>gi|13957634|gb|AAK50589.1|AC084404_14 putative gag-pol precursor [Oryza sativa Japonica Group]
gi|108709362|gb|ABF97157.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 627
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQP---LIGLSGIVT 123
ALV+S I N +KR+L+D G+S++I+ A + ++ K+ QP +IG++ T
Sbjct: 435 ALVVSPTIYNVKMKRVLVDGGASLSIISPAAFDVLKAPGMKL----QPSLLIIGVTPGHT 490
Query: 124 NSDGVITLLV-IAKSYSLLT---DFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQ 179
G + L V S + T DF V PYN +LGR + K A + +
Sbjct: 491 WPLGHVELPVTFGDSTNFRTERIDFDVADLNLPYNAVLGRPALVKFMAATHYAYLQMKMP 550
Query: 180 TIYGIEEIRGDQATAWACA 198
G I GD A ACA
Sbjct: 551 GPAGPITIFGDVKVALACA 569
>gi|147766002|emb|CAN76933.1| hypothetical protein VITISV_024663 [Vitis vinifera]
Length = 1211
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D I PH DAL++S++IG+ V+RIL+D SS +++ + V M ++
Sbjct: 1130 FPPVDPTRILQPHHDALIMSLEIGDFNVRRILVDPSSSADLVQASVVSHMGHSLIGLENP 1189
Query: 112 EQPLIGLSGIVTNSDGVITLLV 133
+ L G +G T S G I L V
Sbjct: 1190 GRILSGFNGSSTTSLGDIILPV 1211
>gi|38605802|emb|CAE05270.2| OSJNBb0014D23.4 [Oryza sativa Japonica Group]
Length = 1684
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 13/181 (7%)
Query: 29 AIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVK 80
++ KR L + P E+ + L Q+ H A+V+S + N +
Sbjct: 566 SLKAMKRELLAAAPTHEATRRARWSEVALTFDQTDHPPCVARGGQIAMVVSPTVCNVKLG 625
Query: 81 RILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AK 136
R+LID G+++NIL A + ++ ++ QP+IG++ T G I L V A
Sbjct: 626 RVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSAN 684
Query: 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
+ DF V + PYN +LGR + K AV + + G + GD A A
Sbjct: 685 FRTERVDFDVADLSLPYNAVLGRPALVKFMAVVHYAYLQMKMPGPGGPITVHGDLKVALA 744
Query: 197 C 197
C
Sbjct: 745 C 745
>gi|147836186|emb|CAN75430.1| hypothetical protein VITISV_009273 [Vitis vinifera]
Length = 1842
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I++ V +L+DNGS++N+ AT + Q +
Sbjct: 461 HVRPLYITVGCSGRRVXSVLLDNGSALNVCPLATAIALGFAPSDFGPSTQTVRAYDSTKR 520
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
G + + + + T F V++ +N++LGR WIH A+PS+ HQ
Sbjct: 521 EVMGTLMIDLQIGPATFSTLFQVLRIPXSFNLLLGRPWIHVAGAIPSSLHQ 571
>gi|147805489|emb|CAN65175.1| hypothetical protein VITISV_029768 [Vitis vinifera]
Length = 1622
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 50/111 (45%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I++ C V +L+DN S++N+ AT + Q +
Sbjct: 258 HVRPLYITVGCLGCRVPSVLLDNDSTLNVCPLATAIALGFAPSDFGPSTQTVREYDSTKR 317
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
G + + + + T F V++ + +N++LGR WIH A+PS+ HQ
Sbjct: 318 EVMGTLMIDLQIGPATFSTLFQVLRIPTSFNLLLGRPWIHVAGAIPSSLHQ 368
>gi|39546230|emb|CAE04479.3| OSJNBa0029L02.20 [Oryza sativa Japonica Group]
Length = 1518
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 47 LSEVSFLPQDLKLIQSP-----HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM 101
+++ SF P+D + + P H L + + V R+L+D G++VN++ + +K+
Sbjct: 560 VAQFSFGPKDA-VFEKPDESNRHMKPLYLKGHVDGKPVSRMLVDGGAAVNLMPYSLFKKL 618
Query: 102 RLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVV 147
R E D++K L GL+G T + G+ + + + +L T F +V
Sbjct: 619 RREDDELKKTNMILNGLNGEPTEARGIFSAELTVGNKTLPTAFFIV 664
>gi|77555466|gb|ABA98262.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 2013
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 34 KRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILID 85
KR L + P E++ + L Q+ H A+V+S I N + R+L+D
Sbjct: 571 KRELLAMAPTHEAMRRARWSEVALTFDQTDHPPCIARGGQVAMVVSPTICNVKLGRVLVD 630
Query: 86 NGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AKSYSLL 141
G+++NIL A + ++ ++ QP+IG++ T G I L V A +
Sbjct: 631 GGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGPANFRTER 689
Query: 142 TDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
+F V + PYN +LGR + K A + + G +RGD A AC
Sbjct: 690 VNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKIPGPGGPISVRGDLKVALAC 745
>gi|147839255|emb|CAN76917.1| hypothetical protein VITISV_027709 [Vitis vinifera]
Length = 773
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 22/130 (16%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DNGS++N I+
Sbjct: 281 IVFSDDDLPPEGSGHIHHLYISVACSGHRVPTVLLDNGSALN---------------TIR 325
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
++ + G +T +++ YS+L V++ S +N++LGR WIH+ A+P
Sbjct: 326 AYDGTQRTIMGTLTAH-----IMIRPVRYSVLVQ--VLRIQSSFNILLGRPWIHEAGAIP 378
Query: 170 STCHQVLCYQ 179
S HQ L Q
Sbjct: 379 SFLHQKLVLQ 388
>gi|108862575|gb|ABA97917.2| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
[Oryza sativa Japonica Group]
Length = 1846
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 19/157 (12%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D +V+ + + N ++R L+D GS++NIL T++ M++ ++
Sbjct: 1423 IKFDRSDHPDRVVHPGRYPMVLDLVVRNVKLRRSLVDGGSALNILFAKTLDDMQIPNTEL 1482
Query: 109 KLFEQP----LIGLSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQ 160
KL P ++GLS G ITL V + T+ F V + Y+ ILG
Sbjct: 1483 KLSNAPFHRVILGLSSTPL---GQITLPVTFGTRENFRTENICFEVADFETAYHAILGLP 1539
Query: 161 WIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
+ K AVP + ++ G+ +R D A C
Sbjct: 1540 ALAKFMAVPHYTYMMMKMPGPQGVISLRSDIKQAVTC 1576
>gi|32492248|emb|CAE03745.1| OSJNBa0019D11.11 [Oryza sativa Japonica Group]
Length = 1770
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S + N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 589 AMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPL 647
Query: 127 GVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V A + DF VV + PYN +LGR + K A + +
Sbjct: 648 GHIDLPVTFGGSANFRTERVDFDVVDLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPS 707
Query: 183 GIEEIRGDQATAWAC 197
G + GD A AC
Sbjct: 708 GPITVYGDLKVALAC 722
>gi|116310725|emb|CAH67521.1| OSIGBa0131L05.2 [Oryza sativa Indica Group]
Length = 1770
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S + N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 589 AMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPL 647
Query: 127 GVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V A + DF VV + PYN +LGR + K A + +
Sbjct: 648 GHIDLPVTFGGSANFRTERVDFDVVDLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPS 707
Query: 183 GIEEIRGDQATAWAC 197
G + GD A AC
Sbjct: 708 GPITVYGDLKVALAC 722
>gi|78708484|gb|ABB47459.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 361
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H D ++ + N ++R LID GS +NIL T++ ++ + ++K P G+ ++
Sbjct: 154 HKDRKLLDPVVRNVKLRRSLIDGGSGLNILFAKTLDDTQIPRTELKPSSAPFHGVILRLS 213
Query: 124 NSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQ 179
+ G ITL V + T+ F V + Y+ ILGR + K VP + ++
Sbjct: 214 SPLGQITLPVTFGTRENFRTENICFEVADFETAYHAILGRPALAKFMVVPHYTYMMMKMP 273
Query: 180 TIYGIEEIRGDQATAWAC 197
G+ +R D A C
Sbjct: 274 GPRGVISLRSDIKQAVTC 291
>gi|110289037|gb|ABG66060.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 542
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 74/172 (43%), Gaps = 19/172 (11%)
Query: 42 PFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNIL 93
P E+ + +L L QS H ALV+S I N +KR+L+D G S++I+
Sbjct: 317 PTHEAARKARWLEVKLTFDQSDHPTVLSRGGKLALVVSPTIHNVKMKRVLVDGGDSLSII 376
Query: 94 DDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD---GVITLLV-IAKSYSLLT---DFLV 146
A+ + ++ K+ QP + + G+ G + L V S + T DF V
Sbjct: 377 SPASFDALKAPGMKL----QPSLSIIGVTPGHMWPLGHVELPVTFGDSTNFRTERIDFDV 432
Query: 147 VKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACA 198
PYNV+LGR + K A + + + G + GD A A A
Sbjct: 433 ADLNLPYNVVLGRPALVKFMAATHYAYLQMKMPGLAGPITVFGDVKVALAYA 484
>gi|57863833|gb|AAW56879.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 2050
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S + N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 598 AMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPL 656
Query: 127 GVITLLV-IAKSYSLLT---DFLVVKATSPYNVILGRQWIHKMRAV 168
G I L V S + T DF V + PYN +LGR + K A
Sbjct: 657 GHIDLPVTFGGSANFRTERVDFDVADLSLPYNAVLGRPALVKFMAA 702
>gi|147778920|emb|CAN69319.1| hypothetical protein VITISV_032662 [Vitis vinifera]
Length = 385
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D P+ DAL++S++IG+ V+RIL+D GSS +++ + V M ++
Sbjct: 238 FPPVDPTRTLQPYRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLTGLENP 297
Query: 112 EQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVK 148
+ L +G T S G I L V A +L F VV+
Sbjct: 298 GRILSEFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQ 334
>gi|77552494|gb|ABA95291.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 1972
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 34 KRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILID 85
KR L + P E++ + L Q+ H A+V+S I N + R+LID
Sbjct: 571 KRELLTMAPTHEAMRRARWSEVALTFDQTDHPPCIARGGQVAMVVSPTICNVKLGRVLID 630
Query: 86 NGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AKSYSLL 141
G+++NIL A + ++ ++ QP+IG++ T G I L V A +
Sbjct: 631 GGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPLGHIDLPVTFGGPANFRTER 689
Query: 142 TDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
F V + PYN +LGR + K A + + G +RGD A AC
Sbjct: 690 VSFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPGGPISVRGDLKVALAC 745
>gi|147862955|emb|CAN82997.1| hypothetical protein VITISV_013264 [Vitis vinifera]
Length = 982
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I+I + V +L+DNGS++N+ AT + Q +
Sbjct: 597 HVRPLYITIGCSSRRVPSVLLDNGSALNVCPLATAIALGFAPSDFGPSTQTVRAYDSTKR 656
Query: 124 NSDG--VITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
G VI L + ++S L F V++ + +N++LGR WIH A+PS+ HQ
Sbjct: 657 EVMGTLVIDLQIGPATFSTL--FQVLRIPTSFNLLLGRPWIHVAGAIPSSLHQ 707
>gi|108708250|gb|ABF96045.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 2027
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 34 KRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILID 85
KR L + P E++ + L Q+ H A+V+S I N + R+LID
Sbjct: 571 KRELLTMAPTHEAMRRARWSEVALTFDQTDHPPCIARGGQVAMVVSPTICNVKLGRVLID 630
Query: 86 NGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AKSYSLL 141
G+++NIL A + ++ ++ QP+IG++ T G I L V A +
Sbjct: 631 GGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPLGHIDLPVTFGGPANFRTER 689
Query: 142 TDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
F V + PYN +LGR + K A + + G +RGD A AC
Sbjct: 690 VSFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPGGPISVRGDLKVALAC 745
>gi|38345903|emb|CAE03547.2| OSJNBa0060D06.13 [Oryza sativa Japonica Group]
Length = 1909
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S I N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 494 AMVVSPTICNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPL 552
Query: 127 GVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V A + +F V + PYN +LGR + K A + +
Sbjct: 553 GHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMSGPG 612
Query: 183 GIEEIRGDQATAWAC 197
G +RGD A AC
Sbjct: 613 GPISVRGDLKVALAC 627
>gi|218201795|gb|EEC84222.1| hypothetical protein OsI_30637 [Oryza sativa Indica Group]
Length = 520
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S + N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 324 AMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPL 382
Query: 127 GVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V A + +F V + PYN +LGR + K+ A + +
Sbjct: 383 GHIDLPVTFGGPANFRTERVNFDVADLSLPYNAVLGRPALVKIMAAVYYAYLQMKMPGPG 442
Query: 183 GIEEIRGDQATAWAC 197
G + GD A AC
Sbjct: 443 GPISVNGDLKVALAC 457
>gi|77555096|gb|ABA97892.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 544
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 4/121 (3%)
Query: 88 SSVNILDDATVE--KMRLEQDKIKLFEQPLI--GLSGIVTNSDGVITLLVIAKSYSLLTD 143
+ V + DD + K +L ++ L + ++ G + + G++ + + S ++
Sbjct: 213 NQVPVADDVAADEAKRKLGRNAEDLIKTNMVFKDFGGNPSETKGILNVELTVGSKTIPNM 272
Query: 144 FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACAVLALK 203
F + Y+++LGR WIH +PST HQ L IE + D++ A A LAL
Sbjct: 273 FFAIDGKGSYSLLLGRDWIHANCCIPSTMHQCLIQWQGDKIEIVPADRSVNVASADLALW 332
Query: 204 E 204
E
Sbjct: 333 E 333
>gi|24796778|gb|AAN64455.1| putative GAG-POL precursor [Oryza sativa Japonica Group]
gi|108709262|gb|ABF97057.1| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
[Oryza sativa Japonica Group]
Length = 798
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSD 126
LV+ + N ++R LID GS++NIL ++ M++ + +++ P G + G+
Sbjct: 594 LVLDPVVRNVRLRRSLIDGGSALNILFAKILDDMQIPRAELRPSNAPFHGVIPGLSATPL 653
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V + T+ F V + Y+ ILGR + K AVP + ++
Sbjct: 654 GQITLPVTFGTRENFRTENVCFEVADFETAYHAILGRLALAKFMAVPHYTYMMMKMLGPR 713
Query: 183 GIEEIRGDQATAWAC 197
G+ +R D A C
Sbjct: 714 GVISLRSDIKQAIIC 728
>gi|77556143|gb|ABA98939.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 2027
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 34 KRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILID 85
KR L + P E++ + L Q+ H A+V+S I N + R+LID
Sbjct: 571 KRELLAMAPTHEAMRRARWSEVALTFDQTDHPPCIARGGQVAMVVSPTICNVKLGRVLID 630
Query: 86 NGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AKSYSLL 141
G+++NIL A + ++ ++ QP+IG++ T G I L V A +
Sbjct: 631 GGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPLGHIDLPVTFGGPANFRTER 689
Query: 142 TDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
F V + PYN +LGR + K A + + G +RGD A AC
Sbjct: 690 VSFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPGGPISVRGDLKVALAC 745
>gi|38344591|emb|CAE05339.2| OSJNBa0079M09.11 [Oryza sativa Japonica Group]
Length = 2028
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 34 KRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILID 85
KR L + P E++ + L Q+ H A+V+S I N + R+LID
Sbjct: 572 KRELLAMAPTHEAMRRARWSEVALTFDQTDHPPCIARGGQVAMVVSPTICNVKLGRVLID 631
Query: 86 NGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AKSYSLL 141
G+++NIL A + ++ ++ QP+IG++ T G I L V A +
Sbjct: 632 GGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPLGHIDLPVTFGGPANFRTER 690
Query: 142 TDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
F V + PYN +LGR + K A + + G +RGD A AC
Sbjct: 691 VSFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPGGPISVRGDLKVALAC 746
>gi|147770996|emb|CAN71312.1| hypothetical protein VITISV_015012 [Vitis vinifera]
Length = 456
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%)
Query: 115 LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
L G +G T S G L V +L FLVV SPYN I+GR W + M+ + T +Q
Sbjct: 115 LFGFNGATTTSLGDXVLXVQVGPVTLNVQFLVVNDLSPYNAIMGRAWFYIMKFIRFTYYQ 174
Query: 175 VLC 177
+L
Sbjct: 175 MLA 177
>gi|52353748|gb|AAU44314.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 2027
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 34 KRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILID 85
KR L + P E++ + L Q+ H A+V+S I N + R+LID
Sbjct: 571 KRELLAMAPTHEAMRRARWSEVALTFDQTDHPPCIARGGQVAMVVSPTICNVKLGRVLID 630
Query: 86 NGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AKSYSLL 141
G+++NIL A + ++ ++ QP+IG++ T G I L V A +
Sbjct: 631 GGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPLGHIDLPVTFGGPANFRTER 689
Query: 142 TDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
F V + PYN +LGR + K A + + G +RGD A AC
Sbjct: 690 VSFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPGGPISVRGDLKVALAC 745
>gi|46575987|gb|AAT01348.1| putative polyprotein [Oryza sativa Japonica Group]
gi|50878388|gb|AAT85163.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1680
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID S++NIL T + M++ + ++
Sbjct: 623 IKFDRSDHPDRVVHLGRYPLVLDPVVRNVKLRRTLIDGASALNILFAKTPDDMQIPRTEL 682
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 683 KPSNAPFHDVIPGLSATPVGQITLPVTFGTRENFRTENVCFEVADFETAYHAILGRPALA 742
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R D A C
Sbjct: 743 KFMAVPHYTYMMMKMPGPGGVISLRSDIKQAVTC 776
>gi|147766102|emb|CAN72382.1| hypothetical protein VITISV_026665 [Vitis vinifera]
Length = 166
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 65 DDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTN 124
+D LV+++ + + V + LI++G V++L + +MR L ++
Sbjct: 65 EDTLVMTLGLDDFNVYKXLINSGHFVDLLQMSAYNQMRYSX-------VALXNPGCVLFR 117
Query: 125 SDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCH 173
+ IT+ + L F VV+ S YN ILG+ W++KM+ +PST H
Sbjct: 118 FNETITISLRDXVLPLNVRFFVVEDLSXYNAILGQSWLNKMKVIPSTYH 166
>gi|147798288|emb|CAN72313.1| hypothetical protein VITISV_037424 [Vitis vinifera]
Length = 1159
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 56/127 (44%), Gaps = 4/127 (3%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L IS+ V +L+DN ++N+ A +
Sbjct: 115 IVFSDDDLPPKGSGHIRPLYISVACSGHRVPIVLLDNDFALNVCPLAIAIALGFSPFDFG 174
Query: 110 LFEQPLIGLSGIVTNSDGVIT--LLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRA 167
F Q I G IT +++ YS+L F V++ S +N++LGR WIHK A
Sbjct: 175 SFTQTDTVYDRIQRTVMGTITAHVMIGPVRYSVL--FQVLRIQSSFNLLLGRHWIHKAGA 232
Query: 168 VPSTCHQ 174
+P HQ
Sbjct: 233 IPFFLHQ 239
>gi|147770598|emb|CAN69031.1| hypothetical protein VITISV_000841 [Vitis vinifera]
Length = 95
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 146 VVKATSPYNVILGRQWIHKMRAVPSTCHQVLCY 178
VV+ SP+N I+GR W+H M+ +PST HQ++ Y
Sbjct: 46 VVEDLSPFNAIMGRTWLHGMKVIPSTYHQMVSY 78
>gi|38347370|emb|CAE04960.2| OSJNBa0070D17.11 [Oryza sativa Japonica Group]
Length = 1646
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 13/181 (7%)
Query: 29 AIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVK 80
++ KR L + P E++ + L Q+ H A+V+S + N +
Sbjct: 453 SLKAMKRELLAAAPTHEAIRRARWSEVALTFDQTDHPPCVARGGQIAMVVSPTVCNVKLG 512
Query: 81 RILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLV-IAKSYS 139
R+LID G+++NIL A + ++ ++ QP+IG++ T G I L V S +
Sbjct: 513 RVLIDGGAALNILSPAAFDTIKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSTN 571
Query: 140 LLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
T+ F V + PYN +LGR + K A + + G + GD A
Sbjct: 572 FRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPGGPITVHGDLKAVLA 631
Query: 197 C 197
C
Sbjct: 632 C 632
>gi|113205246|gb|AAT39963.2| Polyprotein, putative [Solanum demissum]
Length = 1504
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 90 VNILDDATVEK----MRLEQDKIKLFEQPLIGLSG---IVTNSDGVITLLVIAKSYSLLT 142
+ IL++A V +LE+ ++FE I S V ++ G I L++
Sbjct: 183 MKILNEAHVPNEGTMSQLEKIAGRIFEVNCITFSDDELPVEDAIGEIELILKIGPVDFTV 242
Query: 143 DFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQ 179
+F V+ + YN++LGR W+H+ AVPST HQ++ ++
Sbjct: 243 NFQVLNINASYNLLLGRPWVHRAGAVPSTLHQMVKFE 279
>gi|21671881|gb|AAM74243.1|AC074355_5 Putative retroelement [Oryza sativa Japonica Group]
Length = 1233
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 5/134 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDG 127
+V+S I N + R+LID G+++NIL A + +++ ++ QP+IG++ T G
Sbjct: 1 MVVSPTICNVKLGRVLIDGGAALNILSPAAFDAIKVPGMVLRP-SQPIIGVTPGHTWPLG 59
Query: 128 VITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
I L V S + T+ F V + PYN +LGR + K + + G
Sbjct: 60 HIDLPVTFGGSANFRTERVSFDVADLSLPYNAVLGRPALVKFMVAVHYAYLQMKMPGPGG 119
Query: 184 IEEIRGDQATAWAC 197
+ GD A AC
Sbjct: 120 PITVHGDLKVALAC 133
>gi|77551359|gb|ABA94156.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1627
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S+ + N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 612 AMVVSLTVCNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPL 670
Query: 127 GVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V A + +F V + PYN +LGR + K A + +
Sbjct: 671 GHINLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYTYLQMKMPGPG 730
Query: 183 GIEEIRGDQATAWAC 197
G + GD A AC
Sbjct: 731 GPITVHGDHKVALAC 745
>gi|359479112|ref|XP_003632219.1| PREDICTED: uncharacterized protein LOC100853628 [Vitis vinifera]
Length = 1821
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 50/111 (45%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I++ V +L+DNGS++N+ AT + Q +
Sbjct: 414 HVRPLYITVGCSGRRVPSVLLDNGSALNVCPLATAIALGFAPSDFGPSTQTVRAYDSTKR 473
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
G + + + + T F V++ + +N++LGR WIH A+PS+ HQ
Sbjct: 474 EVIGTLMIDLQIGPATFSTLFQVLRIPAFFNLLLGRPWIHVAGAIPSSLHQ 524
>gi|31430746|gb|AAP52619.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|62733623|gb|AAX95740.1| RNase H, putative [Oryza sativa Japonica Group]
Length = 2025
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S I N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 610 AMVVSPTICNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPL 668
Query: 127 GVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V A + +F V + PYN +LGR + K A + +
Sbjct: 669 GHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPG 728
Query: 183 GIEEIRGDQATAWAC 197
G +RGD A AC
Sbjct: 729 GPISVRGDLKVALAC 743
>gi|38344712|emb|CAE05254.2| OSJNBb0115I09.16 [Oryza sativa Japonica Group]
Length = 808
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 13/181 (7%)
Query: 29 AIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVK 80
++ KR L + P E+ + L Q+ H A+V+S + N +
Sbjct: 566 SLKAMKRELLAAAPTHEATRRARWSEVALTFDQTDHPPCVAWGGQIAMVVSPTVCNVKLG 625
Query: 81 RILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AK 136
R+LID G+++NIL A + ++ ++ QP+IG++ T G I L V A
Sbjct: 626 RVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSAN 684
Query: 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
+ DF V + PYN +LGR + K A + + G + GD A A
Sbjct: 685 FRTERVDFDVADLSLPYNAVLGRPVLVKFMAAVHYAYHQMKMPGPGGPITVHGDLKVALA 744
Query: 197 C 197
C
Sbjct: 745 C 745
>gi|32488934|emb|CAE04515.1| OSJNBb0059K02.25 [Oryza sativa Japonica Group]
gi|38345897|emb|CAE03541.2| OSJNBa0060D06.7 [Oryza sativa Japonica Group]
Length = 1831
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S I N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 612 AMVVSPTICNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPL 670
Query: 127 GVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V A + +F V + PYN +LGR + K A + +
Sbjct: 671 GHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPG 730
Query: 183 GIEEIRGDQATAWAC 197
G +RGD A AC
Sbjct: 731 GPISVRGDLKVALAC 745
>gi|147793104|emb|CAN73091.1| hypothetical protein VITISV_041303 [Vitis vinifera]
Length = 1065
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 76 NCL---VKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLL 132
CL V +L+DNGS++N+ AT + Q + G + +
Sbjct: 16 GCLGHKVPSVLLDNGSALNVCPLATTVALGFAPSDFGPSTQTVRAYDSTKREVIGTLVID 75
Query: 133 VIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
+ + T F V++ + +N++LGR WIH+ +PS+ HQ
Sbjct: 76 LQIGPTAFFTLFQVLRIPTSFNLLLGRPWIHRAGVIPSSLHQ 117
>gi|116310901|emb|CAH67840.1| OSIGBa0159H11-OSIGBa0137A07.3 [Oryza sativa Indica Group]
Length = 2027
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S I N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 612 AMVVSPTICNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPL 670
Query: 127 GVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V A + +F V + PYN +LGR + K A + +
Sbjct: 671 GHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPG 730
Query: 183 GIEEIRGDQATAWAC 197
G +RGD A AC
Sbjct: 731 GPISVRGDLKVALAC 745
>gi|116310028|emb|CAH67052.1| OSIGBa0127A14.4 [Oryza sativa Indica Group]
Length = 1983
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S I N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 612 AMVVSPTICNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPL 670
Query: 127 GVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V A + +F V + PYN +LGR + K A + +
Sbjct: 671 GHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPG 730
Query: 183 GIEEIRGDQATAWAC 197
G +RGD A AC
Sbjct: 731 GPISVRGDLKVALAC 745
>gi|108706364|gb|ABF94159.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2025
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S I N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 612 AMVVSPTICNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPL 670
Query: 127 GVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V A + +F V + PYN +LGR + K A + +
Sbjct: 671 GHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPG 730
Query: 183 GIEEIRGDQATAWAC 197
G +RGD A AC
Sbjct: 731 GPISVRGDLKVALAC 745
>gi|51038116|gb|AAT93919.1| putative polyprotein [Oryza sativa Japonica Group]
gi|55168063|gb|AAV43931.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1989
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S I N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 612 AMVVSPTICNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPL 670
Query: 127 GVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V A + +F V + PYN +LGR + K A + +
Sbjct: 671 GHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPG 730
Query: 183 GIEEIRGDQATAWAC 197
G +RGD A AC
Sbjct: 731 GPISVRGDLKVALAC 745
>gi|46485872|gb|AAS98497.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 2027
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S I N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 612 AMVVSPTICNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPL 670
Query: 127 GVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V A + +F V + PYN +LGR + K A + +
Sbjct: 671 GHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPG 730
Query: 183 GIEEIRGDQATAWAC 197
G +RGD A AC
Sbjct: 731 GPISVRGDLKVALAC 745
>gi|34015289|gb|AAQ56480.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 2027
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S I N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 612 AMVVSPTICNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPL 670
Query: 127 GVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V A + +F V + PYN +LGR + K A + +
Sbjct: 671 GHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPG 730
Query: 183 GIEEIRGDQATAWAC 197
G +RGD A AC
Sbjct: 731 GPISVRGDLKVALAC 745
>gi|38344645|emb|CAE05078.2| OSJNBa0094P09.17 [Oryza sativa Japonica Group]
Length = 2027
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S I N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 612 AMVVSPTICNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPL 670
Query: 127 GVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V A + +F V + PYN +LGR + K A + +
Sbjct: 671 GHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPG 730
Query: 183 GIEEIRGDQATAWAC 197
G +RGD A AC
Sbjct: 731 GPISVRGDLKVALAC 745
>gi|38345112|emb|CAE01613.2| OSJNBa0067G20.11 [Oryza sativa Japonica Group]
Length = 2027
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S I N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 612 AMVVSPTICNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPL 670
Query: 127 GVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V A + +F V + PYN +LGR + K A + +
Sbjct: 671 GHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPG 730
Query: 183 GIEEIRGDQATAWAC 197
G +RGD A AC
Sbjct: 731 GPISVRGDLKVALAC 745
>gi|29126347|gb|AAO66539.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|108712176|gb|ABF99971.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2027
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S I N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 612 AMVVSPTICNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPL 670
Query: 127 GVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V A + +F V + PYN +LGR + K A + +
Sbjct: 671 GHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPG 730
Query: 183 GIEEIRGDQATAWAC 197
G +RGD A AC
Sbjct: 731 GPISVRGDLKVALAC 745
>gi|110288778|gb|AAP52608.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1008
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 104 IKFYRSDHPDRVVHPGRYPLVLDPVVRNVKLRRSLIDGGSALNILFAKTLDDMQIPRTEL 163
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 164 KPSNAPFHGVIPGLSATPLGQITLRVTFGTRENFRTENVCFKVADFDTAYHDILGRPALA 223
Query: 164 KMRAVP 169
K AVP
Sbjct: 224 KFMAVP 229
>gi|108862577|gb|ABA97931.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1082
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 9/131 (6%)
Query: 74 IGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK----LFEQPLIGLSGIVTNSDGVI 129
+ N ++R LID GS++NIL T++ M++ + ++K LF + GLS T +I
Sbjct: 718 VRNVKLRRTLIDGGSALNILFAKTLDDMQIPRTELKPSNALFHGVIPGLS--ATPLGQII 775
Query: 130 TLLVIAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEE 186
+ + T+ F V + Y+ ILGR + K AVP + ++ G+
Sbjct: 776 LPVTFGTRENFHTENVYFKVADFGTAYHAILGRPALAKFMAVPHYTYMMMKMPGPRGVIS 835
Query: 187 IRGDQATAWAC 197
+R D A C
Sbjct: 836 LRSDIKQAVTC 846
>gi|22748431|gb|AAN05396.1| putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 1030
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 104 IKFYRSDHPDRVVHPGRYPLVLDPVVRNVKLRRSLIDGGSALNILFAKTLDDMQIPRTEL 163
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ G ITL V + T+ F V + Y+ ILGR +
Sbjct: 164 KPSNAPFHGVIPGLSATPLGQITLRVTFGTRENFRTENVCFKVADFDTAYHDILGRPALA 223
Query: 164 KMRAVP 169
K AVP
Sbjct: 224 KFMAVP 229
>gi|77554334|gb|ABA97130.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1503
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S + N + R+LID G+++NIL + + ++ ++ QP+IG++ T
Sbjct: 359 AMVVSPTVCNVKLGRVLIDGGAALNILSSSAFDAIKAPGMVLRP-SQPIIGVTPRHTWPL 417
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V S + T+ F V + PYN +LGR + + A + +
Sbjct: 418 GHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVRFMAAVHYAYLQMKMPGPG 477
Query: 183 GIEEIRGDQATAWAC 197
G + GD A AC
Sbjct: 478 GPITVHGDLKVALAC 492
>gi|77556771|gb|ABA99567.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2027
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S I N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 612 AMVVSPTICNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPL 670
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V S + T+ F V + PYN +LGR + K A + +
Sbjct: 671 GHIDLPVTFGGSANFCTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPG 730
Query: 183 GIEEIRGDQATAWAC 197
G +RGD A AC
Sbjct: 731 GPISVRGDLKVALAC 745
>gi|77556535|gb|ABA99331.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1452
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S I N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 621 AMVVSPTICNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPL 679
Query: 127 GVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V A + +F V + PYN +LGR + K A + +
Sbjct: 680 GHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPVLVKFMAAVHYAYLQMKMPGPG 739
Query: 183 GIEEIRGDQATAWAC 197
G +RGD A AC
Sbjct: 740 GPISVRGDLKVALAC 754
>gi|147787541|emb|CAN66599.1| hypothetical protein VITISV_039272 [Vitis vinifera]
Length = 441
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F P + I PH DAL++S+++G+ V+RIL+D GSS ++L + + M + ++
Sbjct: 304 IVFPPVNPTRILQPHLDALILSLEMGDFNVRRILVDLGSSADLLQASIIGHMGRDLSGLE 363
Query: 110 LFEQPLIGLSGIVTNSDGVITLLV 133
+ L G +G T S G I L V
Sbjct: 364 NPGRILSGFNGASTTSLGDIVLPV 387
>gi|32489155|emb|CAE04107.1| OSJNBa0096F01.15 [Oryza sativa Japonica Group]
gi|32489171|emb|CAE04552.1| OSJNBa0052P16.1 [Oryza sativa Japonica Group]
Length = 1384
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 5/134 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDG 127
+V+S I N + R+LID G+++NI+ A + ++ ++ QP+IG++ T G
Sbjct: 1 MVVSPTICNVKLGRVLIDGGAALNIISPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPLG 59
Query: 128 VITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYG 183
I L V S + T+ F V + PYN +LGR + K A + + G
Sbjct: 60 HIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAIHYAYLQMKMSGPGG 119
Query: 184 IEEIRGDQATAWAC 197
+ GD A AC
Sbjct: 120 PISVHGDLKVALAC 133
>gi|108708813|gb|ABF96608.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 828
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 6/149 (4%)
Query: 54 PQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQ 113
PQ L+ P + LV+ + N ++R LID G+++NIL T++ +++ + +++
Sbjct: 611 PQYLRC-GPPGEVPLVLDPVVRNVKLRRTLIDGGNALNILFAKTLDNIQIPRTELQPSNA 669
Query: 114 PLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAV 168
P G + G+ G ITL V + T+ F V + Y+ ILGR + K AV
Sbjct: 670 PFHGVIPGLSATPLGQITLPVTFGTRENFRTENICFEVADFETAYHAILGRPALAKFMAV 729
Query: 169 PSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
P + ++ + +R D A C
Sbjct: 730 PHYTYMMMKMPGPREVISLRSDIKQAVTC 758
>gi|77549440|gb|ABA92237.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1646
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 13/159 (8%)
Query: 52 FLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRL 103
+L +K +S H D LV+ + N ++R LID GS +NIL ++ M++
Sbjct: 721 WLETTIKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSVLNILFAKILDDMQI 780
Query: 104 EQDKIKLFEQPLIG-LSGIVTNSDGVITLLVIAKSYSLLTD----FLVVKATSPYNVILG 158
+ ++K P G + G+ G ITL V + F V + Y+ ILG
Sbjct: 781 PRTELKPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRMENICFEVADFETAYHAILG 840
Query: 159 RQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
R + K AVP + ++ G+ +R + A C
Sbjct: 841 RPALAKFMAVPHYTYMMIKKPGPRGVLSLRSNIKQAVTC 879
>gi|38344347|emb|CAD40169.2| OSJNBa0061A09.8 [Oryza sativa Japonica Group]
Length = 872
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 80 KRILIDNGS-SVNILD--DATVEKMRLEQDKIKLFEQPLI--GLSGIVTNSDGVITLLVI 134
K + ID S VN++ D T + +L ++ L + ++ G + + GV+ + +
Sbjct: 154 KPMRIDGNSFPVNMVHRADRTADTGKLGRNAEDLMKTNMVLKDFGGNPSETKGVLNVELT 213
Query: 135 AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
S ++ T F ++ Y+++LGR WIH +PST HQ L
Sbjct: 214 VGSKTIPTTFFIIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 255
>gi|90265064|emb|CAH67689.1| H0510A06.14 [Oryza sativa Indica Group]
gi|116309934|emb|CAH66966.1| H0525D09.6 [Oryza sativa Indica Group]
Length = 2027
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 34 KRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILID 85
KR L + P E++ + L Q+ H A+V+S + N + R+LID
Sbjct: 571 KRELLATAPTHEAMRRARWSEVALTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLID 630
Query: 86 NGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AKSYSLL 141
G+++NIL A + ++ ++ QP+IG++ T G I L V A +
Sbjct: 631 GGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGPANFRTER 689
Query: 142 TDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
+F V + PYN +LGR + K A + + G + GD A AC
Sbjct: 690 VNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPAGPISVHGDLKVALAC 745
>gi|38346291|emb|CAE04174.2| OSJNBa0029C04.4 [Oryza sativa Japonica Group]
Length = 2027
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 34 KRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILID 85
KR L + P E++ + L Q+ H A+V+S I N + R+LID
Sbjct: 571 KRELLAMAPTHEAMRRARWSEVALTFDQTDHPPCIARGGQVAMVVSPTICNVKLGRVLID 630
Query: 86 NGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AKSYSLL 141
G+++NIL A + ++ ++ QP+IG++ T G + L V A +
Sbjct: 631 GGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPLGHVDLPVTFGGPANFRTER 689
Query: 142 TDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
F V + PYN +LGR + K A + + G +RGD A AC
Sbjct: 690 VSFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPGGPISVRGDLKVALAC 745
>gi|147833067|emb|CAN66355.1| hypothetical protein VITISV_004959 [Vitis vinifera]
Length = 500
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 52 FLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLF 111
F P D PH DAL++S++IG V+RIL+D SS +++ + M +
Sbjct: 358 FPPVDPTRTLXPHRDALILSLEIGXFDVRRILVDPDSSADLVQALVIGHM---GHSLAGL 414
Query: 112 EQP---LIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVK 148
E P L G +G T S G I L V A +L F VV+
Sbjct: 415 ENPGRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQ 454
Score = 36.6 bits (83), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 5 ETLKYYIRRFRLASAKVENCDDQLAIVTFKRGLPSNHPFFESLSE 49
E+L+ +++RF A ++E C + FKR + PFFESL++
Sbjct: 114 ESLREFVKRFGQAVLQIEACSMDAVLQIFKRSICPGTPFFESLAK 158
>gi|31432134|gb|AAP53804.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1765
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 13/181 (7%)
Query: 29 AIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVK 80
++ KR L + P E+ + L Q+ H A+V+S + N +
Sbjct: 502 SLKAMKRELLTAAPTHEATRRARWSEVALTFDQTDHPPCVARGGQIAMVVSPTVCNVKLG 561
Query: 81 RILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AK 136
R+LID G+++NIL A + ++ ++ QP+IG++ T G I L V A
Sbjct: 562 RVLIDGGAALNILSPAAFDAIK-APGMVRRPSQPIIGVTPGHTWLLGHIDLPVTFGGSAN 620
Query: 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
+ DF V + PYN +LGR + K A + + G + GD A A
Sbjct: 621 FRTERVDFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPGGPITVHGDLKVALA 680
Query: 197 C 197
C
Sbjct: 681 C 681
>gi|18568247|gb|AAL75984.1|AF466203_13 putative prpol [Zea mays]
Length = 1850
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 13/175 (7%)
Query: 60 IQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG-L 118
+ SP LV+ +GN + ++L+D GS +NI+ T++ +R++ ++ P G +
Sbjct: 872 VPSPGKYPLVVDPVVGNVRLTKVLMDGGSCLNIIYAETLKLLRVDLSSVRAGAAPFHGII 931
Query: 119 SGIVTNSDGVITLLVIAKSYSLLT----DFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
G G + L V + S F VV Y+ +LGR K AVP+ +
Sbjct: 932 PGKRVQPLGRLDLPVCFGTPSNFRRETLTFEVVGFRGTYHAVLGRPCYAKFMAVPNYTYL 991
Query: 175 VLCYQTIYGIEEIRGDQATAWACAV------LALKETKRKDSNFENQAKQ--DVK 221
L G+ + A+ C V AL E++ ++ EN +K+ DVK
Sbjct: 992 KLKMPGPNGVITVGPTYKHAFECDVECVEYAEALAESEALIADLENLSKEVPDVK 1046
>gi|116308907|emb|CAH66039.1| H0515C11.15 [Oryza sativa Indica Group]
gi|116309145|emb|CAH66246.1| OSIGBa0101A01.2 [Oryza sativa Indica Group]
Length = 1369
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Query: 63 PHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIV 122
P +V+ I N V R+LID GSS+N+L +T++ M + Q ++ QP G++
Sbjct: 421 PGRYPIVVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPQSELTPTNQPFHGITPQS 480
Query: 123 TNSD-GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
++ G I L V ++ + T F V + + YN I+GR + K A +Q
Sbjct: 481 SSRPLGKIMLPVTFGQANNFRTKQITFDVAEFDTAYNAIIGRTALAKFMATSHYAYQ 537
>gi|53749349|gb|AAU90208.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1862
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 13/181 (7%)
Query: 29 AIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVK 80
++ KR L + P E+ + L Q+ H A+V+S + N +
Sbjct: 552 SLKAMKRELLAAAPTHEATRRARWSEVALTFDQTDHPPCVARGGQIAMVVSPTVCNVKLG 611
Query: 81 RILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AK 136
R+LID G+++NIL A + ++ ++ QP+IG++ T G I L V A
Sbjct: 612 RVLIDGGAALNILSPAAFDAIKATGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSAN 670
Query: 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
+ DF V + PYN +LGR + K A + + G + GD A A
Sbjct: 671 FRTERVDFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPAGPITVHGDLKVALA 730
Query: 197 C 197
C
Sbjct: 731 C 731
>gi|147845703|emb|CAN79903.1| hypothetical protein VITISV_019550 [Vitis vinifera]
Length = 438
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 79 VKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDG--VITLLVIAK 136
V +L+DNGS +NI ATV Q + + G VI L +
Sbjct: 159 VPSVLLDNGSDLNICPLATVVAFGFAPSDFGSSTQIVRAYNSTKREVMGTLVIDLQIGPA 218
Query: 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
++S L F V++ + +N++LGR WIH+ +PS+ HQ
Sbjct: 219 TFSTL--FPVLRIPTSFNLLLGRPWIHRAGVIPSSLHQ 254
>gi|147845510|emb|CAN80607.1| hypothetical protein VITISV_033525 [Vitis vinifera]
Length = 1357
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I++ V +L+DNGS++N+ AT + Q +
Sbjct: 409 HVRPLYITVGCSGRKVPSVLLDNGSALNVCPLATTIALGFAPSDFGPSTQTVRAYDSTKR 468
Query: 124 NSDG--VITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTI 181
G +I L + ++S+L F +++ + +N++LGR WIH A+P + HQ I
Sbjct: 469 EVMGTLMIDLRIGPATFSIL--FQILRIPTSFNLLLGRPWIHIAGAIPFSLHQKCGLPGI 526
Query: 182 Y 182
Y
Sbjct: 527 Y 527
>gi|20503036|gb|AAM22724.1|AC092388_8 putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 1112
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 19/180 (10%)
Query: 34 KRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILID 85
+R L + P E+ + +L L QS H ALV+S I N +KR+L+D
Sbjct: 501 RRELLAAVPTHEAARKARWLEVKLTFDQSDHPTVLSRGGKLALVVSPTIHNVKMKRVLVD 560
Query: 86 NGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD---GVITLLV-IAKSYSLL 141
G S++I+ A+ + ++ K+ QP + + G+ G + L V S +
Sbjct: 561 GGDSLSIISPASFDALKAPGMKL----QPSLSIIGVTPGHMWPLGHVELPVTFGDSTNFR 616
Query: 142 T---DFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACA 198
T DF V PYNV+LGR + K A + + + G + GD A A A
Sbjct: 617 TERIDFDVADLNLPYNVVLGRPALVKFMAATHYAYLQMKMPGLAGPITVFGDVKVALAYA 676
>gi|116310368|emb|CAH67380.1| OSIGBa0159F11.4 [Oryza sativa Indica Group]
gi|116634846|emb|CAH67296.1| OSIGBa0103O01.14 [Oryza sativa Indica Group]
Length = 1965
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S + N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 550 AMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPL 608
Query: 127 GVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I LLV A + F V + PYN +LGR + K A + +
Sbjct: 609 GHIDLLVTFGGPANFRTERVSFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPG 668
Query: 183 GIEEIRGDQATAWAC 197
G + GD A AC
Sbjct: 669 GPISVHGDLKVALAC 683
>gi|77549344|gb|ABA92141.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1929
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 18/162 (11%)
Query: 40 NHPFFESLSEVSFLPQDLKLIQSPHDDALVISIK--------IGNCLVKRILIDNGSSVN 91
N P + SE++ +K +S H D +V S + + N ++R LID GS++N
Sbjct: 718 NTPQYLRWSEIA-----IKFNRSDHPDRVVHSGRYPLVLDPVVRNVKLRRTLIDGGSALN 772
Query: 92 ILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLV 146
IL T++ M++ ++K P G + G+ G IT+ V + + T+ F +
Sbjct: 773 ILFAKTLDDMQIPCTELKPSNAPFHGVIPGLSATPLGQITVPVTLGTRENFRTENVCFEI 832
Query: 147 VKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIR 188
+ Y ILGR + K AVP + ++ G+ +R
Sbjct: 833 ADFETAYYAILGRPALAKFMAVPHYTYMMMKMPGPRGVISLR 874
>gi|4263831|gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 44 FESLSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM 101
F+S S + F ++ + ++ HDDALV+++ + N V RILID GSSV+++ +T+E+M
Sbjct: 404 FQSTS-ILFDEKETQHLERSHDDALVVTLDVANFEVSRILIDTGSSVDLIFLSTLERM 460
>gi|147805865|emb|CAN62780.1| hypothetical protein VITISV_014121 [Vitis vinifera]
Length = 434
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 25/155 (16%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
++F P D + H+DAL+++ I + V+R+LID G+S+++L + +M L ++
Sbjct: 272 ITFSPIDPNRVLQSHEDALILTPGISSFDVRRVLIDPGNSIDLLQMSVYSQMGLLPSTLE 331
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
L G +G +T S G I L V A + NVIL
Sbjct: 332 NXGWILSGFNGALTISLGDIVLPVQAGPIT-------------QNVIL------------ 366
Query: 170 STCHQVLCYQTIYGIEEIRGDQATAWACAVLALKE 204
T HQ++ Y G ++ G+Q + C+ + L+
Sbjct: 367 FTYHQMVSYLXXDGHIDLFGNQLSIXQCSQVVLES 401
>gi|77552457|gb|ABA95254.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 823
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 5/114 (4%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
LV+ + N ++R LID GS++NIL T++ M++ + ++K P G+ ++ +
Sbjct: 705 LVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKTSNAPFHGVIPRLSATPL 764
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVL 176
G ITL V + T+ F V + Y+ ILGR + K AVP + ++
Sbjct: 765 GQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMM 818
>gi|147838753|emb|CAN69509.1| hypothetical protein VITISV_012512 [Vitis vinifera]
Length = 443
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 37/146 (25%)
Query: 56 DLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPL 115
D I P+ DAL++S IG+ V+RIL+D GSS ++L Q + QPL
Sbjct: 334 DPTRILQPYRDALILSFGIGDFDVRRILVDPGSSADLL-----------QASDSMERQPL 382
Query: 116 IGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQV 175
+ TL +K +A S L R W+H M+A+PST HQ+
Sbjct: 383 -----------SLETLCYWSK-----------QAQS----SLIRTWLHYMKAIPSTYHQM 416
Query: 176 LCYQTIYGIEEIRGDQATAWACAVLA 201
+ + T ++ Q A C +A
Sbjct: 417 VSFLTEDVQIDLYDSQLAAHQCYQIA 442
>gi|147765636|emb|CAN73604.1| hypothetical protein VITISV_027524 [Vitis vinifera]
Length = 1250
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 13/142 (9%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L I + + V +L+DNG ++N+ TV + +
Sbjct: 272 IVFSDDDLPPEGSNHVRPLFIDVVCSDRRVPSVLLDNGFALNVCPLVTVIALGFSPADFR 331
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
Q IV DG ++ S V++ S +N++LGR WIH+ A+P
Sbjct: 332 ASTQ-------IVRAYDGTQRTVMGTLSTH------VLRIQSSFNLLLGRPWIHEAGAIP 378
Query: 170 STCHQVLCYQTIYGIEEIRGDQ 191
S+ HQ + + GI I+ D+
Sbjct: 379 SSLHQKVKFIHEGGIITIQSDR 400
>gi|38346963|emb|CAE03902.2| OSJNBb0026I12.10 [Oryza sativa Japonica Group]
Length = 2009
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 13/181 (7%)
Query: 29 AIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVK 80
++ T KR L + P E+ + L Q+ H A+V+S + N +
Sbjct: 552 SLKTMKRELLAAAPTHEATRRARWSEVALTFDQTDHPPCVARGGQIAMVVSPTVCNVKLG 611
Query: 81 RILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AK 136
R+LID G+++NIL A + ++ ++ QP+IG++ T G I L V A
Sbjct: 612 RVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSAN 670
Query: 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
+ +F V + PYN +LGR + K A + + G + GD A A
Sbjct: 671 FRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPGGPISVHGDLKVALA 730
Query: 197 C 197
C
Sbjct: 731 C 731
>gi|77553980|gb|ABA96776.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 1990
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S I N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 612 AMVVSPTICNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPL 670
Query: 127 GVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V A + F V + PYN +LGR + K A + +
Sbjct: 671 GHIDLPVTFGGPANFRTERVSFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPG 730
Query: 183 GIEEIRGDQATAWAC 197
G +RGD A AC
Sbjct: 731 GPISVRGDLKVALAC 745
>gi|38344134|emb|CAD39844.2| OSJNBb0072N21.13 [Oryza sativa Japonica Group]
gi|38344525|emb|CAE05407.2| OSJNBa0036B17.1 [Oryza sativa Japonica Group]
Length = 1070
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
ALV+S I N +KR+L+D +S++I+ A + ++ K++ P+IG++ T
Sbjct: 623 ALVVSPTIHNVKMKRVLVDGRASLSIISPAAFDALKAPGMKLQ-SSLPIIGVTPGHTWPL 681
Query: 127 GVITLLV-IAKSYSLLT---DFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G + L V S + T DF V PYN +LGR + K A + +
Sbjct: 682 GHVELPVTFGDSTNFRTERIDFDVADFNLPYNAVLGRPALVKFMAATHYAYLQMKMPGPA 741
Query: 183 GIEEIRGDQATAWACA 198
G I GD A CA
Sbjct: 742 GPITIFGDVKVALTCA 757
>gi|55168013|gb|AAV43881.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1551
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 79 VKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSDGVITLLV-IAK 136
++R LID GS++NIL T++ M++ + ++K P G + G+ G ITL V
Sbjct: 740 LRRSLIDGGSALNILFAKTLDDMQIPRTELKPSNSPFHGVIPGLSATPLGQITLPVTFGT 799
Query: 137 SYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQAT 193
+ T+ F V + Y+ ILGR + K AVP + ++ G+ + D
Sbjct: 800 GENFRTENVCFEVADFETVYHAILGRPALAKFMAVPHYTYMMMKMPGPRGVISLWSDIKQ 859
Query: 194 AWAC 197
A C
Sbjct: 860 AVTC 863
>gi|62734631|gb|AAX96740.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77549145|gb|ABA91942.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1372
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 5/140 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD- 126
+V+ I N V +LID GSS+N+L + ++ M + + ++ +Q G++ ++
Sbjct: 536 IVVEPTIRNIKVAWVLIDGGSSINLLFASALDAMGISRSELTPTDQSFHGITPQSSSKPL 595
Query: 127 GVITLLVI---AKSYSL-LTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V A ++ + F V + + YN I+GR + K A +QVL
Sbjct: 596 GKITLPVTFGQANNFRMEQITFDVAEFDTAYNAIIGRTALAKFMATSHYAYQVLKMPGPK 655
Query: 183 GIEEIRGDQATAWACAVLAL 202
G I+G+ A C +L
Sbjct: 656 GTITIQGNTKLAVQCDKWSL 675
>gi|38344571|emb|CAE05529.2| OSJNBa0053B21.3 [Oryza sativa Japonica Group]
gi|38347235|emb|CAE05030.2| OSJNBa0044M19.17 [Oryza sativa Japonica Group]
Length = 1802
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 13/181 (7%)
Query: 29 AIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVK 80
++ KR L + P E+ + L Q+ H A+V+S I N ++
Sbjct: 479 SLKAMKRELLAAAPTHEATRRARWSEVALTFDQTDHPPCVARGGQIAMVVSPTICNVKLR 538
Query: 81 RILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AK 136
R+LID G+++NIL A + ++ ++ QP+IG++ T G I L V A
Sbjct: 539 RVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSAN 597
Query: 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
+ +F V + PYN +LGR + K A + + G + GD A A
Sbjct: 598 FRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPGGPITVHGDLQVALA 657
Query: 197 C 197
C
Sbjct: 658 C 658
>gi|108710260|gb|ABF98055.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1890
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 13/181 (7%)
Query: 29 AIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVK 80
++ KR L + P E+ + + L Q+ H A+V+S + N +
Sbjct: 504 SLKAMKRELLAAAPTHEATRQARWSEVALTFDQTDHPPCVARGGQIAMVVSPTVCNVKLG 563
Query: 81 RILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AK 136
R+LID G+++NIL A + ++ ++ QP+IG++ T G I L V A
Sbjct: 564 RVLIDGGAALNILSPAAFDAIKTPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSAN 622
Query: 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
+ DF V + PYN +LGR + K A + + G + GD A A
Sbjct: 623 FRTERVDFDVAGLSLPYNAVLGRPALVKYMAAVHYAYLQMKMPGPGGPITVHGDLKVALA 682
Query: 197 C 197
C
Sbjct: 683 C 683
>gi|41469575|gb|AAS07318.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 968
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 13/181 (7%)
Query: 29 AIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVK 80
++ KR L + P E+ + + L Q+ H A+V+S + N +
Sbjct: 504 SLKAMKRELLAAAPTHEATRQARWSEVALTFDQTDHPPCVARGGQIAMVVSPTVCNVKLG 563
Query: 81 RILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AK 136
R+LID G+++NIL A + ++ ++ QP+IG++ T G I L V A
Sbjct: 564 RVLIDGGAALNILSPAAFDAIKTPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSAN 622
Query: 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
+ DF V + PYN +LGR + K A + + G + GD A A
Sbjct: 623 FRTERVDFDVAGLSLPYNAVLGRPALVKYMAAVHYAYLQMKMPGPGGPITVHGDLKVALA 682
Query: 197 C 197
C
Sbjct: 683 C 683
>gi|40714700|gb|AAR88606.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1871
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 13/181 (7%)
Query: 29 AIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVK 80
++ KR L + P E+ + + L Q+ H A+V+S + N +
Sbjct: 504 SLKAMKRELLAAAPTHEATRQARWSEVALTFDQTDHPPCVARGGQIAMVVSPTVCNVKLG 563
Query: 81 RILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AK 136
R+LID G+++NIL A + ++ ++ QP+IG++ T G I L V A
Sbjct: 564 RVLIDGGAALNILSPAAFDAIKTPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSAN 622
Query: 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
+ DF V + PYN +LGR + K A + + G + GD A A
Sbjct: 623 FRTERVDFDVAGLSLPYNAVLGRPALVKYMAAVHYAYLQMKMPGPGGPITVHGDLKVALA 682
Query: 197 C 197
C
Sbjct: 683 C 683
>gi|147823161|emb|CAN75280.1| hypothetical protein VITISV_012467 [Vitis vinifera]
Length = 799
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 5/149 (3%)
Query: 30 IVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSS 89
I FK+ + + PFF SL++ D Q+ D ++ + + + N S
Sbjct: 215 IKIFKQSIDXSTPFFXSLAKKXPATMDBLFRQA--DKYFMLKDDVQDNEARSFKPSNQSR 272
Query: 90 VNILDDATVEKMRLEQDKIKLFEQP--LIGLSGIVT-NSDGVITLLVIAKSYSLLTDFLV 146
A+ ++ + E P L+ + T S G + L V +L F +
Sbjct: 273 QASKRRASHQQQNQMGYSPSVLENPGRLLSRFNVATMTSLGDVVLPVQVGPITLNVQFSM 332
Query: 147 VKATSPYNVILGRQWIHKMRAVPSTCHQV 175
V SPYN I+G W+H+M+ +PST HQ+
Sbjct: 333 VDDLSPYNAIMGHAWLHRMKVIPSTYHQM 361
>gi|38346194|emb|CAD39523.2| OSJNBa0027O01.10 [Oryza sativa Japonica Group]
Length = 2020
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S+ + N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 612 AMVVSLTVCNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPL 670
Query: 127 GVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V A + +F V + PYN +LGR + K A + +
Sbjct: 671 GHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPG 730
Query: 183 GIEEIRGDQATAWAC 197
G + GD A AC
Sbjct: 731 GPISVHGDLKVALAC 745
>gi|147801164|emb|CAN66547.1| hypothetical protein VITISV_036484 [Vitis vinifera]
Length = 881
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 49/111 (44%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I++ + V +L+DN S++N+ AT + F Q +
Sbjct: 522 HVHPLYITVGFSSHRVPSVLLDNDSALNVCPLATAIALGFAPSDFGPFTQTVRAYDSTKR 581
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
G + + + + T F V + S +N++LGR WIH +PS+ HQ
Sbjct: 582 EVMGTLMVDLQIGPTTFSTLFQVFRIPSSFNLLLGRPWIHIAGVIPSSLHQ 632
>gi|28269476|gb|AAO38019.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 761
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
ALV+S I N +KR+L+D G+S++I+ A + ++ K++ P+I ++ T
Sbjct: 350 ALVVSPTIHNVKMKRVLVDGGASLSIISPAAFDALKAPGMKLQP-SLPIISVTPGHTWPL 408
Query: 127 GVITLLV-IAKSYSLLT---DFLVVKATSPYNVILGRQWIHKMRAV 168
G + L V S + T DF VV PYN +LGR + K A
Sbjct: 409 GHVELSVTFGDSTNFRTERIDFDVVDLNLPYNAVLGRPALVKFMAA 454
>gi|77553507|gb|ABA96303.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 796
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 16/153 (10%)
Query: 78 LVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD-GVITL-LVIA 135
L K++ ++ G+S+N+L +T++ M + + ++ +QP G++ ++ G ITL
Sbjct: 357 LAKQLALEKGNSINLLFASTLDTMGIPRSELTPTDQPFHGITPQSSSKPLGKITLPRTFG 416
Query: 136 KSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQA 192
++ + T+ F V + + YN I+GR + K A +QVL G I+G+
Sbjct: 417 QANNFRTEQITFDVAEVDTAYNAIIGRNALAKFMATSHYAYQVLKMSGPKGTITIQGN-- 474
Query: 193 TAWACAVLALKETKRKD----SNFENQAKQDVK 221
A LA++ T S+ N AK+D K
Sbjct: 475 -----AKLAVQSTHPAHLSQLSHPRNMAKEDEK 502
>gi|15217352|gb|AAK92690.1|AC090714_23 putative polyprotein [Oryza sativa Japonica Group]
gi|108709313|gb|ABF97108.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 706
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSD 126
LV+ + N ++R ID GS++NIL T++ M++ + ++K P G + G+ +
Sbjct: 502 LVLDPLVRNVKLRRSHIDGGSALNILFAKTLDDMQIPRTELKPSIAPFHGVIPGLSSTPL 561
Query: 127 GVITLLVIAKSYSLLTD----FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL V + F V Y+ ILGR + K AVP + ++
Sbjct: 562 GHITLPVTFGTRENFRTKNICFKVADFEMAYDAILGRPALAKFMAVPHYTYMMIKMPGPQ 621
Query: 183 GIEEIRGDQATAWAC 197
G+ +R D C
Sbjct: 622 GVISLRSDIKQGITC 636
>gi|108709636|gb|ABF97431.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 795
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
ALV+S I N +KR+L+D G+S++I+ A + ++ K++ P+I ++ T
Sbjct: 384 ALVVSPTIHNVKMKRVLVDGGASLSIISPAAFDALKAPGMKLQP-SLPIISVTPGHTWPL 442
Query: 127 GVITLLV-IAKSYSLLT---DFLVVKATSPYNVILGRQWIHKMRAV 168
G + L V S + T DF VV PYN +LGR + K A
Sbjct: 443 GHVELSVTFGDSTNFRTERIDFDVVDLNLPYNAVLGRPALVKFMAA 488
>gi|108862665|gb|ABA98419.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1316
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID GS++NIL T++ M++ + ++
Sbjct: 454 IKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRSLIDGGSALNILFAKTLDDMQIPRTEL 513
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTDFLVVKAT---SPYNVILGRQWIH 163
K G + G+ G ITL V + T+ + ++ + Y+ ILGR +
Sbjct: 514 KSSNASFHGVIPGLCATPLGQITLPVTFGTRENFCTENVCIEVADFETAYHAILGRPALA 573
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ +R + A C
Sbjct: 574 KFMAVPHYTYMMMKMPGPQGVISLRSNIKKAVTC 607
>gi|108710404|gb|ABF98199.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1887
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 13/181 (7%)
Query: 29 AIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVK 80
++ KR L + P E+ + L Q+ H A+V+S + N +
Sbjct: 524 SLKAMKRELLAAAPTHEATRRARWSEVALTFDQTDHPPCVARGGQIAMVVSPTVCNVKLG 583
Query: 81 RILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AK 136
R+LID G+++NIL A + ++ ++ QP+IG++ T G I L V A
Sbjct: 584 RVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSAN 642
Query: 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
+ DF V + PYN +LGR + K A + + G + GD A A
Sbjct: 643 FRTERVDFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPGGPITVHGDLKVALA 702
Query: 197 C 197
C
Sbjct: 703 C 703
>gi|108708549|gb|ABF96344.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1841
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 13/181 (7%)
Query: 29 AIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVK 80
++ KR L + P E+ + L Q+ H A+V+S + N +
Sbjct: 566 SLKAMKRELLAAAPTHEATRRARWSEVALTFDQTDHPPCVARGGQIAMVVSPTVCNVKLG 625
Query: 81 RILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AK 136
R+LID G+++NIL A + ++ ++ QP+IG++ T G I L V A
Sbjct: 626 RVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSAN 684
Query: 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
+ DF V + PYN +LGR + K A + + G + GD A A
Sbjct: 685 FRTERVDFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPGGPITVHGDLKVALA 744
Query: 197 C 197
C
Sbjct: 745 C 745
>gi|37991909|gb|AAR06355.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1809
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 13/181 (7%)
Query: 29 AIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVK 80
++ KR L + P E+ + L Q+ H A+V+S + N +
Sbjct: 566 SLKAMKRELLAAAPTHEATRRARWSEVALTFDQTDHPPCVARGGQIAMVVSPTVCNVKLG 625
Query: 81 RILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AK 136
R+LID G+++NIL A + ++ ++ QP+IG++ T G I L V A
Sbjct: 626 RVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSAN 684
Query: 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
+ DF V + PYN +LGR + K A + + G + GD A A
Sbjct: 685 FRTERVDFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPGGPITVHGDLKVALA 744
Query: 197 C 197
C
Sbjct: 745 C 745
>gi|13435244|gb|AAK26119.1|AC084406_2 putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 1901
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 13/181 (7%)
Query: 29 AIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVK 80
++ KR L + P E+ + L Q+ H A+V+S + N +
Sbjct: 524 SLKAMKRELLAAAPTHEATRRARWSEVALTFDQTDHPPCVARGGQIAMVVSPTVCNVKLG 583
Query: 81 RILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AK 136
R+LID G+++NIL A + ++ ++ QP+IG++ T G I L V A
Sbjct: 584 RVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSAN 642
Query: 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
+ DF V + PYN +LGR + K A + + G + GD A A
Sbjct: 643 FRTERVDFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPGGPITVHGDLKVALA 702
Query: 197 C 197
C
Sbjct: 703 C 703
>gi|77554214|gb|ABA97010.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1335
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 13/181 (7%)
Query: 29 AIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVK 80
++ KR L + P E++ + L Q+ H A+V+S + N +
Sbjct: 109 SLKAMKRELLAAAPTHEAMRRARWSEVALTFNQTDHPPCVARGGQIAMVVSPTVCNVKLG 168
Query: 81 RILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLV-IAKSYS 139
R+LID G+++NIL + ++ ++ QP+IG++ T G I L V S +
Sbjct: 169 RVLIDGGAALNILSPTAFDAIKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSAN 227
Query: 140 LLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
T+ F V + PYN +LGR K A + + G + GD A A
Sbjct: 228 FRTERVNFDVADLSLPYNAVLGRPAFVKFIAAVHYAYLQMKMPGPGGPISVHGDIKVALA 287
Query: 197 C 197
C
Sbjct: 288 C 288
>gi|55168172|gb|AAV44039.1| putatve polyprotein [Oryza sativa Japonica Group]
Length = 1905
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S I N + R+LID G+++NI+ A + ++ ++ QP+IG++ T
Sbjct: 612 AMVVSPTICNVKLGRVLIDGGAALNIISPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPL 670
Query: 127 GVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V A + +F V + PYN +LGR + K A + +
Sbjct: 671 GHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPG 730
Query: 183 GIEEIRGDQATAWAC 197
G +RGD A AC
Sbjct: 731 GPISVRGDLKVALAC 745
>gi|38567701|emb|CAE75991.1| B1160F02.22 [Oryza sativa Japonica Group]
Length = 392
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 68 LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSD 126
LV+ + N ++R LI+ GS++NIL T++ +++ + ++K P G + G+ +
Sbjct: 229 LVLDPVVRNVKLRRSLINGGSALNILFAKTLDDIQIPRTELKPSNAPFHGVIPGLSSTRL 288
Query: 127 GVITLLVIAKSY-SLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G ITL ++ + T+ F V + Y+VI GR + K VP + ++
Sbjct: 289 GQITLPDTFDTWENFRTENICFEVADFETVYHVIFGRPALAKFMVVPHYTYMMMKMPGPR 348
Query: 183 GIEEIRGDQATAWAC 197
G+ +R D A C
Sbjct: 349 GVISLRSDIKQAVTC 363
>gi|147806152|emb|CAN76697.1| hypothetical protein VITISV_009720 [Vitis vinifera]
Length = 1003
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 50/111 (45%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I++ V +L+DNGS++N+ AT + Q +
Sbjct: 569 HVRPLYITVGCSGRRVPSVLLDNGSALNVCPLATAIALGFAPSDFGPSTQTVRAYDSTKR 628
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
G + + + + T F V++ + +N++LGR WIH A+PS+ HQ
Sbjct: 629 EVMGTLMIDLQIGPATFSTLFQVLRIPTSFNLLLGRPWIHVAGAIPSSLHQ 679
>gi|62733358|gb|AAX95475.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|62733703|gb|AAX95813.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|77550263|gb|ABA93060.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1367
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 69/171 (40%), Gaps = 35/171 (20%)
Query: 27 QLAIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDN 86
QLA+ KRG S + E E S LK +P +V+ I N V R+LID+
Sbjct: 513 QLALEKGKRGAASKMKWSEQKIEFSEA-DHLKTAVTPGRYPIVVEPTIQNIKVARVLIDD 571
Query: 87 GSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLV 146
GSS+N+L +T++ M + + +I F V
Sbjct: 572 GSSINLLFASTLDAMGIPRKQIT----------------------------------FDV 597
Query: 147 VKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
+ + YN I+GR + K A +QVL G I+G++ A C
Sbjct: 598 AEFDAAYNAIIGRTALTKFIAASHYAYQVLKMPGPKGTITIQGNEKLAVQC 648
>gi|147859709|emb|CAN78889.1| hypothetical protein VITISV_029416 [Vitis vinifera]
Length = 286
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+SF L + ++DALV+ + + N V RILI+ SS+N+L + +M ++
Sbjct: 133 ISFSVHSLTKVDPTYEDALVLKVGVDNFDVHRILINPRSSINLLQMSAYRQMGYSSSTLE 192
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGR 159
+ LI + S G + L V +L FLVV S YN I+G
Sbjct: 193 NPGRILISFNKASIVSIGDVVLPVQVGPVTLNVYFLVVDDLSSYNAIMGH 242
>gi|108711045|gb|ABF98840.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1068
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 49/177 (27%), Positives = 78/177 (44%), Gaps = 13/177 (7%)
Query: 34 KRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILID 85
+R L + P E+ + +L L QS H ALV+S I N +KR+L+D
Sbjct: 440 RRELLAAVPTHEAARKARWLEVKLTFDQSDHPTVLARGGKLALVVSPTIHNVRMKRVLVD 499
Query: 86 NGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLV-IAKSYSLLTD- 143
G+S++I+ A + ++ K++ P+IG++ T G + L V S + T+
Sbjct: 500 GGASLSIISPAAFDALKAPAMKLQP-SLPIIGVTPGHTWPLGHVELPVTFGDSTNFRTER 558
Query: 144 --FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACA 198
F V PY +LGR + K A + + G + GD A ACA
Sbjct: 559 IVFDVADLNLPYYAVLGRPALVKFMAATHYAYLQMKMPGPSGPITVFGDVKVALACA 615
>gi|14626290|gb|AAK71558.1|AC087852_18 putative gag-pol protein precursor [Oryza sativa Japonica Group]
Length = 1049
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 49/177 (27%), Positives = 78/177 (44%), Gaps = 13/177 (7%)
Query: 34 KRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILID 85
+R L + P E+ + +L L QS H ALV+S I N +KR+L+D
Sbjct: 421 RRELLAAVPTHEAARKARWLEVKLTFDQSDHPTVLARGGKLALVVSPTIHNVRMKRVLVD 480
Query: 86 NGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLV-IAKSYSLLTD- 143
G+S++I+ A + ++ K++ P+IG++ T G + L V S + T+
Sbjct: 481 GGASLSIISPAAFDALKAPAMKLQP-SLPIIGVTPGHTWPLGHVELPVTFGDSTNFRTER 539
Query: 144 --FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACA 198
F V PY +LGR + K A + + G + GD A ACA
Sbjct: 540 IVFDVADLNLPYYAVLGRPALVKFMAATHYAYLQMKMPGPSGPITVFGDVKVALACA 596
>gi|147815296|emb|CAN61240.1| hypothetical protein VITISV_016131 [Vitis vinifera]
Length = 1755
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 10/125 (8%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F DL S H L I++ V +L+DNGS++N+ A +
Sbjct: 593 IVFSDDDLPPEGSDHVRPLYITVVCLGRKVPSVLLDNGSALNVYPLAIAIALG------- 645
Query: 110 LFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVP 169
F G S + + + ++S L F V++ + +N++LGR WIH++R +P
Sbjct: 646 -FAPSDFGPSTQIVRAYDSTKREIGPTTFSTL--FQVLRILASFNLLLGRPWIHRVRVIP 702
Query: 170 STCHQ 174
S+ HQ
Sbjct: 703 SSLHQ 707
>gi|108864597|gb|ABA94871.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1965
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S I N ++R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 612 AMVVSPTICNVKLRRVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPL 670
Query: 127 GVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V A + L F V + PYN +LGR + K A H +
Sbjct: 671 GHIDLPVTFGGSANFRTELVSFDVADLSLPYNAVLGRPALVKFMA---AVHYAYLQMKMP 727
Query: 183 GIEEIRGDQATAWAC 197
G GD A AC
Sbjct: 728 G----HGDLKVALAC 738
>gi|147834404|emb|CAN63244.1| hypothetical protein VITISV_028809 [Vitis vinifera]
Length = 1399
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 13/111 (11%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L IS+ V +L+DNGS++N+ AT L D + ++G S I
Sbjct: 313 HTSPLYISVSCLGHRVPFVLLDNGSTLNVCPLATTIATILAYDSTS---RKVMGTSEI-- 367
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
LL+ ++ L F V++ + +N++LGR WIH+ A+ S HQ
Sbjct: 368 ------ELLIGPTTFPTL--FQVLRILTSFNLLLGRPWIHRAGAILSFLHQ 410
>gi|57834077|emb|CAE02845.4| OSJNBa0014F04.11 [Oryza sativa Japonica Group]
Length = 991
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 96 ATVEKM-RLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVKATSPYN 154
AT K+ R +D+IK L SG + G++ + + + ++ T F V+ Y+
Sbjct: 404 ATFRKLGRNTEDRIKT-NLVLKDFSGNPLETKGILNVELTVGNKTIPTSFFVIDLKGSYS 462
Query: 155 VILGRQWIHKMRAVPSTCHQVL 176
++LGR WIH +PST HQ L
Sbjct: 463 LLLGRDWIHANCCIPSTMHQCL 484
>gi|116309405|emb|CAH66481.1| OSIGBa0076I14.2 [Oryza sativa Indica Group]
Length = 710
Score = 46.6 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 61 QSPHDDA-LVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLS 119
++P DD V+S I N +KR+L+D G+S++I+ A + ++ K++ P+IG++
Sbjct: 511 KAPADDGGDVVSPTIHNVKMKRVLVDGGASLSIISPAAFDALKAPGMKLQP-SLPIIGVT 569
Query: 120 GIVTNSDGVITLLV-IAKSYSLLT---DFLVVKATSPYNVILGRQWIHKMRAVPSTCHQV 175
T G + L V S + T DF V PYN +LGR + K +
Sbjct: 570 PGHTWPLGHVELPVTFGDSTNFRTERIDFDVADLNLPYNAVLGRPALVKFMVATHYAYLQ 629
Query: 176 LCYQTIYGIEEIRGDQATAWACA 198
+ G I GD A ACA
Sbjct: 630 MKMSGPAGPITIFGDVKVALACA 652
>gi|77550747|gb|ABA93544.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 615
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Query: 57 LKLIQSPHDD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKI 108
+K +S H D LV+ + N ++R LID+GS +NIL T++ M++ ++
Sbjct: 146 IKFDRSDHPDRVVHPGRYPLVLDPVVRNIKLRRYLIDDGSVLNILFPKTLDDMQIPHTEL 205
Query: 109 KLFEQPLIG-LSGIVTNSDGVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIH 163
K P G + G+ + ITL V + T+ F V + Y+ ILGR +
Sbjct: 206 KPSNAPFHGVIPGLSSTPLSQITLPVTFGTRENFRTENICFEVADFETAYHAILGRLALA 265
Query: 164 KMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
K AVP + ++ G+ + D A C
Sbjct: 266 KFIAVPHYTYMMMKMPGPRGVISLWSDIKQAVTC 299
>gi|51854361|gb|AAU10741.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1510
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S + N + R+LID G+++NIL A + ++ ++ QP++G++ T
Sbjct: 410 AMVVSPTVSNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIVGVTQGHTWPL 468
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGR 159
G I L V S + T+ F V + PYN +LGR
Sbjct: 469 GHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGR 505
>gi|38344801|emb|CAE03002.2| OSJNBa0043L09.21 [Oryza sativa Japonica Group]
Length = 2028
Score = 46.6 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 48/176 (27%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 34 KRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILID 85
KR L + P E++ + L Q+ H A+ +S I N + R+LID
Sbjct: 571 KRELLAMAPTHEAMRRARWSEVALTFDQTDHPPCIARGGQVAMAVSPTICNVKLGRVLID 630
Query: 86 NGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AKSYSLL 141
G+++NIL A + ++ ++ QP+IG++ T G I L V A +
Sbjct: 631 GGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPLGHIDLPVTFGGPANFRTER 689
Query: 142 TDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
F V + PYN +LGR + K A + + G +RGD A AC
Sbjct: 690 VSFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPGGPISVRGDLKVALAC 745
>gi|147859767|emb|CAN81055.1| hypothetical protein VITISV_032525 [Vitis vinifera]
Length = 1548
Score = 46.6 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 50/111 (45%)
Query: 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVT 123
H L I++ V +L+DNGS++N+ AT + Q +
Sbjct: 726 HVRPLYITVGCSGRRVPSVLLDNGSALNVCPLATAIALGFAPSDFGPSTQTVRAYDSTKR 785
Query: 124 NSDGVITLLVIAKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQ 174
G + + + + T F V++ + +N++LGR WIH A+PS+ HQ
Sbjct: 786 EVMGTLMIDLQIGPATFSTLFQVLRIPASFNLLLGRPWIHVAGAIPSSLHQ 836
>gi|108705673|gb|ABF93468.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1800
Score = 46.6 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 20/205 (9%)
Query: 12 RRFRLASAKVENCDD-------QLAIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPH 64
RRF+ A + D + ++ KR L + P E+ + L Q+ H
Sbjct: 523 RRFQEPRATIATVDGGACAHACRRSLKAMKRELLAAAPTHEATRRARWSEVALTFDQTDH 582
Query: 65 DD--------ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLI 116
A+V+S + N + R+LID G+++NIL A + ++ ++ QP+I
Sbjct: 583 PPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPII 641
Query: 117 GLSGIVTNSDGVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTC 172
G++ T G I L V A + +F V + PYN +LGR + K A
Sbjct: 642 GVTPGHTWPLGHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYA 701
Query: 173 HQVLCYQTIYGIEEIRGDQATAWAC 197
+ + G + GD A AC
Sbjct: 702 YLQMKMPGPGGPISVYGDLKVALAC 726
>gi|38344350|emb|CAD40172.2| OSJNBa0061A09.11 [Oryza sativa Japonica Group]
Length = 2030
Score = 46.6 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 13/181 (7%)
Query: 29 AIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVK 80
+I KR L + P E+ + L Q+ H A+V+S + N +
Sbjct: 566 SIKAMKRELLAAAPTHEATRRARWSEVALTFDQTDHPPCVARGGQIAMVVSPTVCNVKLG 625
Query: 81 RILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AK 136
R+LID G+++NIL A V+ ++ ++ QP+IG++ T G I L V A
Sbjct: 626 RVLIDGGAALNILSPAAVDAIKAPGMMLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGPAN 684
Query: 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
+ +F V + PY+ +LGR + K A + + G + GD A A
Sbjct: 685 FRTERVNFDVADLSLPYSAVLGRPALVKFMAAVHYAYLQMKMPGPDGPISVHGDLKVALA 744
Query: 197 C 197
C
Sbjct: 745 C 745
>gi|77555125|gb|ABA97921.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 421
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 66/124 (53%), Gaps = 5/124 (4%)
Query: 58 KLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG 117
K+ P ++V+ I N + R+LID+GSS+N+L +T++ + + + ++ +QP G
Sbjct: 17 KIATIPGRYSIVVEPTIRNIKLTRVLIDDGSSINLLFASTLDAIGIPRSELTPTDQPFHG 76
Query: 118 LSGIVTNSD-GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAVPSTC 172
++ ++ G ITL V ++ + T+ F V + + YN I+GR + A
Sbjct: 77 ITPESSSKTLGKITLPVTFGQADNFQTEQITFDVKEFDTAYNAIIGRGSLAMFMAASHYT 136
Query: 173 HQVL 176
+QVL
Sbjct: 137 YQVL 140
>gi|116310476|emb|CAH67479.1| H0805A05.9 [Oryza sativa Indica Group]
Length = 1930
Score = 46.6 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 13/181 (7%)
Query: 29 AIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVK 80
++ KR L + P E+ + L Q+ H A+V+S I N +
Sbjct: 491 SLKAMKRELLAAAPTHEATRRARWSEVALTFDQTDHPPCVARGGQIAMVVSPTICNVKLG 550
Query: 81 RILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AK 136
R+LID G+++NIL A + ++ ++ QP+IG++ T G I L V A
Sbjct: 551 RVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSAN 609
Query: 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
+ +F V + PYN +LGR + K A + + G I GD A A
Sbjct: 610 FRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPGGPISIHGDLKVALA 669
Query: 197 C 197
C
Sbjct: 670 C 670
>gi|51854384|gb|AAU10764.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1743
Score = 46.6 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 13/181 (7%)
Query: 29 AIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVK 80
++ KR L + P E+ + L Q+ H A+V+S + N +
Sbjct: 439 SLKAMKRELLAAAPTHEATRRARWSEVALTFDQTDHPPCVARGGQIAMVVSPTVCNVKLG 498
Query: 81 RILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AK 136
R+LID G+++NIL A + ++ ++ QP+IG++ T G I L V A
Sbjct: 499 RVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSAN 557
Query: 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
+ DF V + PYN +LGR + K A + + G + GD A A
Sbjct: 558 FRTERVDFDVADLSLPYNAVLGRPALVKFMAAVHYAYLHMKMPGPGGPITVHGDLKVALA 617
Query: 197 C 197
C
Sbjct: 618 C 618
>gi|77548466|gb|ABA91263.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2030
Score = 46.6 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 13/181 (7%)
Query: 29 AIVTFKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVK 80
++ KR L + P E+ + + L Q+ H A+V+S + N +
Sbjct: 566 SLKAMKRELLAAAPTHEATRQARWSEVALTFDQTDHPPCVARGGQIAMVVSPTVCNVKLG 625
Query: 81 RILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AK 136
R+LID G+++NIL A + ++ ++ QP+IG++ T G I L V A
Sbjct: 626 RVLIDGGAALNILSPAAFDAIKAPGMMLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGPAN 684
Query: 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWA 196
+ +F V + PYN +LGR + K A + + G + GD A A
Sbjct: 685 FRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPDGPISVHGDLKVALA 744
Query: 197 C 197
C
Sbjct: 745 C 745
>gi|116309766|emb|CAH66808.1| OSIGBa0135C13.3 [Oryza sativa Indica Group]
Length = 1911
Score = 46.6 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 48/176 (27%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 34 KRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILID 85
KR L + P E++ + L Q+ H A+V+S I N + R+LID
Sbjct: 458 KRELLAVAPTHEAMRRARWSEVALTFDQTDHPPCVARGGQIAMVVSPTICNVKLGRVLID 517
Query: 86 NGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVI----AKSYSLL 141
G+++NIL A + ++ ++ QP+IG++ T G I L V A +
Sbjct: 518 GGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGPANFRTER 576
Query: 142 TDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWAC 197
F V + PYN +LGR + K A + + G + GD A AC
Sbjct: 577 VSFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPRGPISVHGDLKVALAC 632
>gi|77556683|gb|ABA99479.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1322
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S + N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 422 AMVVSPTVCNVKLGRVLIDRGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPL 480
Query: 127 GVITLLV-IAKSYSLLTD---FLVVKATSPYNVILGRQWIHKMRAV 168
G I L V S + T+ F V + PYN +LGR + K A
Sbjct: 481 GHIDLPVTFGGSANFRTERVKFDVADLSLPYNAVLGRPALVKFMAA 526
>gi|147838338|emb|CAN69864.1| hypothetical protein VITISV_032438 [Vitis vinifera]
Length = 387
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%)
Query: 50 VSFLPQDLKLIQSPHDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIK 109
+ F +DL + PH+D L+++++I V+RIL+D SS NIL M E +++
Sbjct: 157 IKFTSKDLYDVSLPHEDPLIVTLQIEKYQVQRILVDTRSSSNILFHHCFRSMYREHEELC 216
Query: 110 LFEQPLIGLSGIVTNS 125
L + L+G + T++
Sbjct: 217 LSQTLLVGFNRKTTHA 232
>gi|108862668|gb|ABA98473.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 830
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 77/178 (43%), Gaps = 13/178 (7%)
Query: 33 FKRGLPSNHPFFESLSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVKRILI 84
+R L + P E+ + + L QS H ALV+S I N +KR+L+
Sbjct: 304 MRRELLAAVPTHEAARKARWSEVKLTFDQSDHPTVLARGGKLALVVSPTIHNVRMKRVLV 363
Query: 85 DNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITL-LVIAKSYSLLT- 142
+ +S++I+ A + ++ K++ P+IG++ T G + L + S + T
Sbjct: 364 EWRASLSIISPAAFDALKAPGMKLQP-SLPIIGVTPGHTWPLGHVELPMTFGDSTNFRTE 422
Query: 143 --DFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQATAWACA 198
DF V PYN +LGR + K A + + Q G + GD A CA
Sbjct: 423 RNDFDVADLNLPYNAVLGRPTLVKFMAATHYAYLQMKMQGPAGPITVFGDVKVALTCA 480
>gi|77551438|gb|ABA94235.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1800
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S + N + R+LID G+++NIL A + ++ ++ QP+IG++ T
Sbjct: 499 AMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPL 557
Query: 127 GVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V A + +F V + PYN +LGR + K A + +
Sbjct: 558 GHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMTMPGPG 617
Query: 183 GIEEIRGDQATAWAC 197
G I GD A AC
Sbjct: 618 GPITIHGDLKVALAC 632
>gi|62734552|gb|AAX96661.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|77549477|gb|ABA92274.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2027
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 5/135 (3%)
Query: 67 ALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSD 126
A+V+S I N + R+LID G+++NIL + ++ ++ QP+IG++ T
Sbjct: 612 AMVVSPTICNVKLGRVLIDGGAALNILSPVAFDAIKAPGMVLQP-SQPIIGVTPGHTWPL 670
Query: 127 GVITLLVI----AKSYSLLTDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIY 182
G I L V A + +F V + PYN +LGR + K A + +
Sbjct: 671 GHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPC 730
Query: 183 GIEEIRGDQATAWAC 197
G +RGD A AC
Sbjct: 731 GPISVRGDLKVALAC 745
>gi|62733898|gb|AAX96007.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550195|gb|ABA92992.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 516
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
Query: 79 VKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIG-LSGIVTNSDGVITLLVIAKS 137
+KR LID G ++NIL T+++M++ + ++K P G + G+ + G ITL V +
Sbjct: 116 LKRSLIDGGDALNILFAKTLDEMQIPRTELKPSIAPFHGVIPGLSSTPLGQITLPVTFST 175
Query: 138 YSLL----TDFLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEIRGDQAT 193
F V + Y+ ILG + K AVP + ++ G+ +R D
Sbjct: 176 RENFRTENVSFEVADFETAYHAILGHPALAKFMAVPHYTYMMMKMPVQRGVISLRSDNKQ 235
Query: 194 A 194
A
Sbjct: 236 A 236
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,207,065,653
Number of Sequences: 23463169
Number of extensions: 123125966
Number of successful extensions: 316414
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 723
Number of HSP's that attempted gapping in prelim test: 314299
Number of HSP's gapped (non-prelim): 1988
length of query: 221
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 84
effective length of database: 9,144,741,214
effective search space: 768158261976
effective search space used: 768158261976
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 74 (33.1 bits)