Query 045020
Match_columns 221
No_of_seqs 164 out of 582
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 15:49:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045020.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045020hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s8i_A Protein DDI1 homolog 1; 99.4 1.8E-12 6.3E-17 101.8 11.8 119 65-187 22-141 (148)
2 2i1a_A DNA damage-inducible pr 99.3 3.5E-11 1.2E-15 93.8 12.0 110 65-179 24-134 (148)
3 1fmb_A EIAV protease; hydrolas 98.1 2.4E-05 8.1E-10 57.5 10.1 92 69-168 10-101 (104)
4 3slz_A GAG-Pro-POL polyprotein 98.0 7E-06 2.4E-10 62.8 6.1 101 64-184 20-120 (132)
5 2hs1_A HIV-1 protease; ultra-h 97.6 0.00011 3.8E-09 53.4 6.0 87 69-168 10-96 (99)
6 3ec0_A Protease; HIV-2, inhibi 97.3 0.00078 2.7E-08 48.8 7.2 87 69-168 10-96 (99)
7 2hah_A Protease, retropepsin; 97.3 0.0014 4.6E-08 48.9 8.6 96 64-168 12-113 (116)
8 3ka2_A [L-Ala51;Gly51']HIV-1 p 96.0 0.031 1.1E-06 45.5 8.6 89 69-170 10-98 (203)
9 2pma_A Uncharacterized protein 93.9 0.098 3.4E-06 40.3 5.6 47 128-174 93-142 (146)
10 3sqf_A Protease; folded monome 93.1 0.29 9.9E-06 36.1 6.8 91 69-168 11-104 (114)
11 3ka2_A [L-Ala51;Gly51']HIV-1 p 92.5 0.88 3E-05 36.8 9.4 90 65-168 111-200 (203)
12 2rsp_A RSV protease; hydrolase 91.4 0.22 7.4E-06 37.3 4.3 89 74-169 27-121 (124)
13 3liy_A Protease; hydrolase, hy 79.5 2.1 7.3E-05 31.4 4.1 88 69-167 12-111 (116)
14 1lya_A Cathepsin D; lysosomal 45.7 24 0.00083 24.3 4.0 30 66-96 13-44 (97)
15 3pvk_A Candidapepsin-2; hydrol 45.4 1.1E+02 0.0039 25.3 9.0 96 64-161 10-128 (342)
16 3fv3_A SAPP1P-secreted asparti 44.3 89 0.003 26.0 8.2 96 64-161 10-122 (339)
17 3qvc_A Histo-aspartic protease 42.5 1E+02 0.0034 27.4 8.5 92 67-161 138-251 (451)
18 2qzx_A Candidapepsin-5; aspart 39.7 1.2E+02 0.0042 25.2 8.4 95 65-161 11-128 (342)
19 3psg_A Pepsinogen; hydrolase(a 38.3 92 0.0031 26.6 7.4 30 72-101 241-275 (370)
20 2apr_A Rhizopuspepsin; hydrola 36.4 1.3E+02 0.0044 24.9 7.9 33 63-96 12-46 (325)
21 2l7y_A Putative endo-beta-N-ac 36.1 76 0.0026 22.3 5.3 57 74-148 27-83 (98)
22 1j71_A Candidapepsin, aspartic 34.8 1.5E+02 0.005 24.6 8.0 95 65-161 11-128 (334)
23 2bju_A Plasmepsin II; aspartic 34.6 1.9E+02 0.0066 25.6 9.1 93 66-161 138-252 (453)
24 3qvc_A Histo-aspartic protease 28.5 2.3E+02 0.0078 25.0 8.5 35 68-102 318-354 (451)
25 1b5f_A Protein (cardosin A); h 28.0 52 0.0018 26.2 3.8 30 72-101 197-232 (239)
26 1wkr_A Polyporopepsin; hydrola 24.4 2E+02 0.0067 23.9 7.0 68 61-149 7-76 (340)
27 1lya_B Cathepsin D; lysosomal 23.9 70 0.0024 25.2 3.9 31 71-101 107-142 (241)
28 1q1o_A Cell division control p 23.4 1.7E+02 0.0057 20.5 5.2 67 125-192 2-76 (98)
29 1ibq_A Aspergillopepsin; aspar 22.9 77 0.0026 26.3 4.1 96 64-161 12-125 (325)
30 3pvk_A Candidapepsin-2; hydrol 22.4 89 0.003 25.9 4.4 31 71-101 200-234 (342)
31 4aa9_A Chymosin; hydrolase, as 21.5 3.3E+02 0.011 22.1 10.1 101 56-158 1-121 (320)
32 1izd_A Aspartic proteinase; su 21.2 70 0.0024 26.6 3.5 96 64-161 13-126 (323)
33 2jys_A Protease/reverse transc 21.0 2.2E+02 0.0076 20.0 5.7 83 70-164 10-95 (107)
34 3cms_A Chymosin B; hydrolase, 21.0 1E+02 0.0034 25.6 4.4 31 71-101 197-232 (323)
35 1bxo_A Protein (penicillopepsi 20.8 73 0.0025 26.5 3.5 96 64-161 13-126 (323)
36 3slz_A GAG-Pro-POL polyprotein 20.8 1.5E+02 0.005 21.9 4.8 36 70-105 76-112 (132)
37 2r2d_A AGR_PTI_140P, Zn-depend 20.8 2.6E+02 0.0088 21.9 6.8 12 81-92 54-65 (276)
38 1yg9_A Aspartic protease BLA G 20.6 74 0.0025 26.6 3.5 25 69-94 20-44 (330)
39 1mpp_A Pepsin; hydrolase(acid 20.5 95 0.0032 26.1 4.2 30 72-101 218-253 (361)
No 1
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=99.41 E-value=1.8e-12 Score=101.80 Aligned_cols=119 Identities=16% Similarity=0.221 Sum_probs=92.9
Q ss_pred CCceEEEEEEcCeeeeEEEecCCCccccccHHHHHhhccccccccccccceecccCCcccccceee-EEEEEcCeeEEEE
Q 045020 65 DDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVIT-LLVIAKSYSLLTD 143 (221)
Q Consensus 65 ~~~L~i~~~I~~~~v~riLVD~GSsvnil~~~~~~~mg~~~~~L~~~~~~l~gf~g~~~~~lG~i~-L~v~~g~~t~~~~ 143 (221)
...+++.+.|++.+++ +|||+||+.++|+.+..+++|+....-........|.+ .....|.+. +++++|+.++.+.
T Consensus 22 ~~~l~v~~~Ing~~v~-~LVDTGAs~s~Is~~~A~rlGL~~~~~~~~~~~a~g~G--~~~~~g~v~~~~I~Ig~~~~~~~ 98 (148)
T 3s8i_A 22 VTMLYINCKVNGHPLK-AFVDSGAQMTIMSQACAERCNIMRLVDRRWAGVAKGVG--TQRIIGRVHLAQIQIEGDFLQCS 98 (148)
T ss_dssp CCCCEEEEEETTEEEE-EEECTTCSSCEEEHHHHHHTTCGGGEEGGGCEECCC-----CEEEEEEEEEEEEETTEEEEEE
T ss_pred cCEEEEEEEECCEEEE-EEEeCCCCcEeeCHHHHHHcCCccccCcceeEEEEcCC--ccEEEEEEEEEEEEECCEEEEEE
Confidence 4568999999999986 99999999999999999999986531111222334432 345678775 8999999999999
Q ss_pred EEEEeeCCceeeEEcchhhhhccccccCccceeeeecCCcEEEE
Q 045020 144 FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGIEEI 187 (221)
Q Consensus 144 F~Vvd~~~~yn~ILGr~wL~~~~~i~st~~q~vk~~~~~g~i~l 187 (221)
|.|++ ...++.|||.+||.+++++......+|.+...+..+.-
T Consensus 99 ~~Vle-~~~~d~LLGmD~L~~~~~~ID~~~~~L~l~~~~~~~pf 141 (148)
T 3s8i_A 99 FSILE-DQPMDMLLGLDMLRRHQCSIDLKKNVLVIGTTGTQTYF 141 (148)
T ss_dssp EEEET-TCSSSEEECHHHHHHTTCEEETTTTEEECTTTCCEEEC
T ss_pred EEEeC-CCCcCeeccHHHHHhCCEEEEcCCCEEEEccCCeEEee
Confidence 99998 44579999999999999998888888877665555553
No 2
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=99.29 E-value=3.5e-11 Score=93.76 Aligned_cols=110 Identities=23% Similarity=0.244 Sum_probs=80.4
Q ss_pred CCceEEEEEEcCeeeeEEEecCCCccccccHHHHHhhccccccccccccceecccCCcccccceee-EEEEEcCeeEEEE
Q 045020 65 DDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVIT-LLVIAKSYSLLTD 143 (221)
Q Consensus 65 ~~~L~i~~~I~~~~v~riLVD~GSsvnil~~~~~~~mg~~~~~L~~~~~~l~gf~g~~~~~lG~i~-L~v~~g~~t~~~~ 143 (221)
...+++.+.|+|..+. +|||+||+.++++.+..+++|+....-........|.++. ...|.+. ..+++|+.+..+.
T Consensus 24 ~~~~~v~v~InG~~~~-~LvDTGAs~s~is~~~a~~lgl~~~~~~~~~~~a~g~g~~--~~~~~~~~~~i~ig~~~~~~~ 100 (148)
T 2i1a_A 24 VPMLYINIEINNYPVK-AFVDTGAQTTIMSTRLAKKTGLSRMIDKRFIGEARGVGTG--KIIGRIHQAQVKIETQYIPCS 100 (148)
T ss_dssp CCCCEEEEEETTEEEE-EEECTTCSSCEEEHHHHHHHTGGGGCBCCCC-------------CEEEEEEEEEETTEEEEEE
T ss_pred cceEEEEEEECCEEEE-EEEECCCCccccCHHHHHHcCCCccCCcceEEEEecCCCc--ccccEEEEEEEEECCEEecee
Confidence 3457999999999776 9999999999999999999998653211111123455443 2356665 5889999999999
Q ss_pred EEEEeeCCceeeEEcchhhhhccccccCccceeeee
Q 045020 144 FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQ 179 (221)
Q Consensus 144 F~Vvd~~~~yn~ILGr~wL~~~~~i~st~~q~vk~~ 179 (221)
|.|++ .+++.|||.+||.++++.......+|.+.
T Consensus 101 ~~vl~--~~~d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 101 FTVLD--TDIDVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp EEEEC--SSCSEEECHHHHHHTTCEEETTTTEEEET
T ss_pred EEEec--CCCCeEecHHHHhhCCEEEECCCCEEEEc
Confidence 99998 46899999999999999877777777664
No 3
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=98.13 E-value=2.4e-05 Score=57.49 Aligned_cols=92 Identities=21% Similarity=0.350 Sum_probs=71.0
Q ss_pred EEEEEEcCeeeeEEEecCCCccccccHHHHHhhccccccccccccceecccCCcccccceeeEEEEEcCeeEEEEEEEEe
Q 045020 69 VISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVK 148 (221)
Q Consensus 69 ~i~~~I~~~~v~riLVD~GSsvnil~~~~~~~mg~~~~~L~~~~~~l~gf~g~~~~~lG~i~L~v~~g~~t~~~~F~Vvd 148 (221)
++++.|++..+. .|+|+||-..++.......|+.+..+.++ ..+.|.+|. ..+. .-.+++.+++......++|-
T Consensus 10 ~v~v~I~Gq~~e-~LLDTGAD~TVl~~~~w~~i~lp~~~w~p--~~i~GiGG~-i~v~-~~~i~i~i~g~~~~gtvlv~- 83 (104)
T 1fmb_A 10 TTIVLINDTPLN-VLLDTGADTSVLTTAHYNRLKYRGRKYQG--TGIGGVGGN-VETF-STPVTIKKKGRHIKTRMLVA- 83 (104)
T ss_dssp EEEEEETTEEEE-EEECTTCSSCEEEHHHHHHCSSCCCCEEC--CCEEETTEE-ECCE-EEEEEEEETTEEEEEEEEEE-
T ss_pred EEEEEECCEEEE-EEeccCCCcEEEccccCcccCCCCccCCc--cEEEeCCCe-EEee-EeeeEEEECCeEEEEEEEEC-
Confidence 578999999765 99999999999999999888876532333 567776554 3455 77799999887777776664
Q ss_pred eCCceeeEEcchhhhhcccc
Q 045020 149 ATSPYNVILGRQWIHKMRAV 168 (221)
Q Consensus 149 ~~~~yn~ILGr~wL~~~~~i 168 (221)
+.|.| |+||.||.++++.
T Consensus 84 -~tp~n-iiGRd~L~qlg~t 101 (104)
T 1fmb_A 84 -DIPVT-ILGRDILQDLGAK 101 (104)
T ss_dssp -SCSSC-EECHHHHHHTTCC
T ss_pred -CCCCC-EecHhHHhhcCcE
Confidence 45655 8999999999875
No 4
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=98.05 E-value=7e-06 Score=62.84 Aligned_cols=101 Identities=21% Similarity=0.282 Sum_probs=70.4
Q ss_pred CCCceEEEEEEcCeeeeEEEecCCCccccccHHHHHhhccccccccccccceecccCCcccccceeeEEEEEcCeeEEEE
Q 045020 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTD 143 (221)
Q Consensus 64 h~~~L~i~~~I~~~~v~riLVD~GSsvnil~~~~~~~mg~~~~~L~~~~~~l~gf~g~~~~~lG~i~L~v~~g~~t~~~~ 143 (221)
..+| ++++.|++..+. +|+|+||+.-++...-+. +......+.|.+|... ..-.-.+++++++......
T Consensus 20 ~~RP-~v~i~I~G~~~~-~LlDTGAd~tVl~~~~~p--------~~~~p~~I~GiGG~i~-vr~~~~i~IeI~g~~~~~~ 88 (132)
T 3slz_A 20 PPEP-RITLKVGGQPVT-FLVDTGAQHSVLTQNPGP--------LSDKSAWVQGATGGKR-YRWTTDRKVHLATGKVTHS 88 (132)
T ss_dssp CCSS-EEEEEETTEEEE-EEECTTCSSCEECSCCCS--------EEEEEEEEECSSCEEE-EEEECCEEEEETTEEEEEC
T ss_pred cCCC-EEEEEECCEEEE-EEEeCCCCeEEEccccCC--------CCCCceEEEccCCEEE-EEEEeeeEEEECCeeecce
Confidence 3344 678999999877 999999999888754221 2333467788888754 2222237899998887777
Q ss_pred EEEEeeCCceeeEEcchhhhhccccccCccceeeeecCCcE
Q 045020 144 FLVVKATSPYNVILGRQWIHKMRAVPSTCHQVLCYQTIYGI 184 (221)
Q Consensus 144 F~Vvd~~~~yn~ILGr~wL~~~~~i~st~~q~vk~~~~~g~ 184 (221)
|.|. ...|. .||||.||.++++. +.|+.+++.
T Consensus 89 ~lV~-~~tPv-nLLGrd~Ltqlg~t-------L~fp~~g~~ 120 (132)
T 3slz_A 89 FLHV-PDCPY-PLLGRDLLTKLKAQ-------IHFEGSGAQ 120 (132)
T ss_dssp CEEC-TTSSS-CEECHHHHHHHTCE-------EEEETTEEE
T ss_pred EEEE-CCCCc-cEECHhhHhhCCcE-------EECCCCCce
Confidence 7553 45665 46999999999987 446554444
No 5
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=97.61 E-value=0.00011 Score=53.38 Aligned_cols=87 Identities=25% Similarity=0.460 Sum_probs=62.7
Q ss_pred EEEEEEcCeeeeEEEecCCCccccccHHHHHhhccccccccccccceecccCCcccccceeeEEEEEcCeeEEEEEEEEe
Q 045020 69 VISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVK 148 (221)
Q Consensus 69 ~i~~~I~~~~v~riLVD~GSsvnil~~~~~~~mg~~~~~L~~~~~~l~gf~g~~~~~lG~i~L~v~~g~~t~~~~F~Vvd 148 (221)
++++.|++..+. .|+|+||-..++.. +..+. ..+| ..+.|.+| ...+...-.+++.+.+....-.++|
T Consensus 10 ~vtvkI~Gq~~e-aLLDTGAD~TVl~~-----~~~p~-~wkp--k~igGiGG-~i~v~qy~qi~iei~g~~~~gtvlV-- 77 (99)
T 2hs1_A 10 LVTIKIGGQLKE-ALLDTGADDTIIEE-----MSLPG-RWKP--KMIGGIGG-FIKVRQYDQIIIEIAGHKAIGTVLV-- 77 (99)
T ss_dssp EEEEEETTEEEE-EEECTTCSSEEESC-----CSSCC-CCEE--EEEEETTE-EEEEEEEEEEEEEETTEEEEEEEEE--
T ss_pred EEEEEECCEEEE-EEeccCCCcEEEec-----ccCCC-CCCC--cEEEeCCC-cEeeeEeccEEEEEeCCEEEEEEEe--
Confidence 578999998876 99999999888863 22221 1222 35666544 3566677788999988777777777
Q ss_pred eCCceeeEEcchhhhhcccc
Q 045020 149 ATSPYNVILGRQWIHKMRAV 168 (221)
Q Consensus 149 ~~~~yn~ILGr~wL~~~~~i 168 (221)
.+.|.| |+||.||.++++-
T Consensus 78 ~~tPvn-iiGRd~Ltqlg~t 96 (99)
T 2hs1_A 78 GPTPVN-IIGRNLLTQIGAT 96 (99)
T ss_dssp SCCSSC-EECHHHHTTTTCE
T ss_pred CCCccC-chhHhHHHHcCCE
Confidence 456665 8999999998874
No 6
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=97.30 E-value=0.00078 Score=48.83 Aligned_cols=87 Identities=18% Similarity=0.299 Sum_probs=61.3
Q ss_pred EEEEEEcCeeeeEEEecCCCccccccHHHHHhhccccccccccccceecccCCcccccceeeEEEEEcCeeEEEEEEEEe
Q 045020 69 VISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVK 148 (221)
Q Consensus 69 ~i~~~I~~~~v~riLVD~GSsvnil~~~~~~~mg~~~~~L~~~~~~l~gf~g~~~~~lG~i~L~v~~g~~t~~~~F~Vvd 148 (221)
++++.|+|..+. .|+|+||-..++. .+..+ ...+|. .+.|.+| ...+...-.+++.+.+....-.++|-
T Consensus 10 ~vti~I~Gq~~e-~LLDTGAD~TVl~-----~~~~P-g~w~pk--~igGiGG-~i~v~qy~~i~iei~g~~~~gtvlV~- 78 (99)
T 3ec0_A 10 VVTAYIEGQPVE-VLLDTGADDSIVA-----GIELG-NNYSPK--IVGGIGG-FINTKEYKNVEIEVLNKKVRATIMTG- 78 (99)
T ss_dssp EEEEEETTEEEE-EEECTTCSSCEES-----SCCCC-SCCEEE--EEEETTE-EEEEEEEEEEEEEETTEEEEEEEEEE-
T ss_pred eEEEEECCEEEE-EEEecCCCceEEc-----CcccC-CCCCce--EEEecCC-cEeeeEEeeEEEEECCeEEEEEEEeC-
Confidence 678999998877 9999999888883 22222 222222 4666544 44555666788999888877777774
Q ss_pred eCCceeeEEcchhhhhcccc
Q 045020 149 ATSPYNVILGRQWIHKMRAV 168 (221)
Q Consensus 149 ~~~~yn~ILGr~wL~~~~~i 168 (221)
+.|.| |+||.+|.++++-
T Consensus 79 -~tPvn-iiGRnlLtqlG~t 96 (99)
T 3ec0_A 79 -DTPIN-IFGRNILTALGMS 96 (99)
T ss_dssp -CCSSC-EECHHHHHHHTCE
T ss_pred -CCCcC-eeehhhHhhcCcE
Confidence 56664 6999999998874
No 7
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=97.29 E-value=0.0014 Score=48.94 Aligned_cols=96 Identities=19% Similarity=0.358 Sum_probs=61.2
Q ss_pred CCCceEEEEEEcCeeeeEEEecCCCccccccHHHHHhhccccccccccccceecccCCcccccceeeEEEEEcCee----
Q 045020 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYS---- 139 (221)
Q Consensus 64 h~~~L~i~~~I~~~~v~riLVD~GSsvnil~~~~~~~mg~~~~~L~~~~~~l~gf~g~~~~~lG~i~L~v~~g~~t---- 139 (221)
..+|++ +.|++..+. .|+|+||-..++...-+.. .+...++ ...+.|.+|. ..+.....+++++.+..
T Consensus 12 ~~rP~v--ikI~Gq~~e-aLLDTGAD~TVi~~~~~~~---~p~~wkp-k~~igGiGG~-i~v~qy~qv~iei~g~~~~~~ 83 (116)
T 2hah_A 12 KRPEIL--IFVNGYPIK-FLLDTGADITVLNRRDFQV---KNSIENG-RQMIGGIGGF-IRGTNYINVHLEIRDENYKTQ 83 (116)
T ss_dssp SCCEEE--EEETTEEEE-EEECTTCSSCEEEGGGCCC---TTCEEEE-EEEEEETTEE-EEEEEEEEEEEEECCTTSCCE
T ss_pred cCCCEE--EEECCEEEE-EEecCCCCcEEEccccccc---CCCCCCC-ceEEecCCCc-eeeeEEccEEEEEeCCCCCcc
Confidence 346666 999998876 9999999998887532200 1122222 1226665553 34445556788776544
Q ss_pred -EEEEEEEEe-eCCceeeEEcchhhhhcccc
Q 045020 140 -LLTDFLVVK-ATSPYNVILGRQWIHKMRAV 168 (221)
Q Consensus 140 -~~~~F~Vvd-~~~~yn~ILGr~wL~~~~~i 168 (221)
..-.+.|.+ .+.+.| |+||.+|.++++.
T Consensus 84 ~~~gtvlV~p~tP~~vn-iiGRd~Ltqlg~t 113 (116)
T 2hah_A 84 CIFGNVCVLEDNSTPVN-ILGRDNMIKFNIR 113 (116)
T ss_dssp EEEEEEEEETTCCCSSE-EECHHHHTTTTCC
T ss_pred eeEEEEEECCCCCcccc-EecHHHHhHcCCE
Confidence 566666765 443365 8999999998874
No 8
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=96.00 E-value=0.031 Score=45.48 Aligned_cols=89 Identities=21% Similarity=0.393 Sum_probs=60.7
Q ss_pred EEEEEEcCeeeeEEEecCCCccccccHHHHHhhccccccccccccceecccCCcccccceeeEEEEEcCeeEEEEEEEEe
Q 045020 69 VISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVK 148 (221)
Q Consensus 69 ~i~~~I~~~~v~riLVD~GSsvnil~~~~~~~mg~~~~~L~~~~~~l~gf~g~~~~~lG~i~L~v~~g~~t~~~~F~Vvd 148 (221)
.+++.|++..+. .|+|+||...++. .+.++. ..+| ..+.|.+|. ..+.=.-.+++.+.+......+.|
T Consensus 10 ~vtv~I~Gq~~e-~LLDTGAD~TVl~-----~~~lpg-~w~p--k~igGIGG~-i~vrqy~~i~iei~g~~~~gtvlV-- 77 (203)
T 3ka2_A 10 LVTIRIGGQLKE-ALLDTGADDTVIE-----ELNLPG-XWKP--KLIGGIAGF-IKVRQYDQIPVEIXGHKAIGTVLV-- 77 (203)
T ss_dssp EEEEEETTEEEE-EEECTTCSSCEEC-----SCCCSS-CEEE--EEEEETTEE-EEEEEEEEEEEEETTEEEEEEEEE--
T ss_pred eEEEEECCEEEE-EEEecCCCceEEe-----cccCCC-CCCc--eEEEEccCc-EEEEEEcceeEEEcCeEEEEEEee--
Confidence 578999999766 9999999988875 233332 2222 246666543 222222357788888877777766
Q ss_pred eCCceeeEEcchhhhhcccccc
Q 045020 149 ATSPYNVILGRQWIHKMRAVPS 170 (221)
Q Consensus 149 ~~~~yn~ILGr~wL~~~~~i~s 170 (221)
.+.|.| |+||+.|.++++.-+
T Consensus 78 g~tPvn-IiGRd~LtqlG~tLn 98 (203)
T 3ka2_A 78 GPTPVN-IIGRNLLTQIGXTLN 98 (203)
T ss_dssp SCCSSC-EECHHHHTTTTCEEE
T ss_pred CCCCcC-ccchhhhhhcCceEE
Confidence 356877 799999999988643
No 9
>2pma_A Uncharacterized protein; APC86035.2, protein LPG0085, DUF785, legionella pneumophila pneumophila STR. philadelphia 1; 1.89A {Legionella pneumophila subsp} SCOP: b.50.1.3
Probab=93.92 E-value=0.098 Score=40.32 Aligned_cols=47 Identities=17% Similarity=0.156 Sum_probs=37.3
Q ss_pred eeeEEEEEcCeeEEEEEEEEeeCC-ceeeEEcchhhhh--ccccccCccc
Q 045020 128 VITLLVIAKSYSLLTDFLVVKATS-PYNVILGRQWIHK--MRAVPSTCHQ 174 (221)
Q Consensus 128 ~i~L~v~~g~~t~~~~F~Vvd~~~-~yn~ILGr~wL~~--~~~i~st~~q 174 (221)
.|.+.+++|+.+..+.|...|-.. .|.++|||.||.. +-+-|+.-|+
T Consensus 93 VV~~~i~lG~~~~~ie~tLtdRs~m~ypmLLGR~~L~~~~~lVD~s~~~l 142 (146)
T 2pma_A 93 VVLLNIKLGDKVRTIKVNLTNRKRFLYPLLLGRDAIIDFNGAVDPALTFT 142 (146)
T ss_dssp EEEEEEEETTEEEEEEEEEECCCCCSCSEEECHHHHHHTTEEEETTCCCT
T ss_pred EEEEEEEECCEEEEEEEEEcCCCcCCCCEEechhHHhhCCEEECCchhcc
Confidence 367999999999999999998555 7999999999954 4444655443
No 10
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=93.14 E-value=0.29 Score=36.08 Aligned_cols=91 Identities=18% Similarity=0.229 Sum_probs=53.3
Q ss_pred EEEEEEcCeeeeEEEecCCCccccccHHHHHhhccccccccc--cccceecccCCcccccceeeEEEE-EcCeeEEEEEE
Q 045020 69 VISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKL--FEQPLIGLSGIVTNSDGVITLLVI-AKSYSLLTDFL 145 (221)
Q Consensus 69 ~i~~~I~~~~v~riLVD~GSsvnil~~~~~~~mg~~~~~L~~--~~~~l~gf~g~~~~~lG~i~L~v~-~g~~t~~~~F~ 145 (221)
.+++.|++..+. .|+|+||-..++.. +.++ ...++ +...+.|.+|....-.-...+..+ +.+......-+
T Consensus 11 ~vti~I~Gq~~e-aLLDTGADdTVi~~-----~~lp-g~W~p~~~~k~igGIGG~i~v~qy~~~~~~~~i~g~k~i~tvl 83 (114)
T 3sqf_A 11 SLTLWLDDKMFT-GLINTGADVTIIKL-----EDWP-PNWPITDTLTNLRGIGQSNNPKQSSKYLTWRDKENNSGLIKPF 83 (114)
T ss_dssp EEEEEETTEEEE-EEECTTCSSCEEEG-----GGSC-TTSCEEECCCCCTTCCGGGCCEEESSCEEEECTTCCEEEECCE
T ss_pred eEEEEECCEEEE-EEEccCCCceEEec-----ccCC-CCcccCcCceEEEeccceEEEEEeccceEEEecCCCEEEEEEE
Confidence 577999998877 99999998887753 3333 23444 446677777653211111122232 32332222224
Q ss_pred EEeeCCceeeEEcchhhhhcccc
Q 045020 146 VVKATSPYNVILGRQWIHKMRAV 168 (221)
Q Consensus 146 Vvd~~~~yn~ILGr~wL~~~~~i 168 (221)
|. .+.|.| |+||.-|.++++-
T Consensus 84 V~-~ptPvN-IiGRn~LtqlG~t 104 (114)
T 3sqf_A 84 VI-PNLPVN-LWGRDLLSQMKIM 104 (114)
T ss_dssp EE-TTCSSC-EECHHHHTTSCC-
T ss_pred EC-CCCccc-EEchhhHhhcCcE
Confidence 43 245655 5899999998874
No 11
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=92.47 E-value=0.88 Score=36.83 Aligned_cols=90 Identities=21% Similarity=0.397 Sum_probs=57.8
Q ss_pred CCceEEEEEEcCeeeeEEEecCCCccccccHHHHHhhccccccccccccceecccCCcccccceeeEEEEEcCeeEEEEE
Q 045020 65 DDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDF 144 (221)
Q Consensus 65 ~~~L~i~~~I~~~~v~riLVD~GSsvnil~~~~~~~mg~~~~~L~~~~~~l~gf~g~~~~~lG~i~L~v~~g~~t~~~~F 144 (221)
.+| .+++.|++..+. .|+|+||-..++. .+..+ .+.+| ..+.|.+|.. .+.=.-.+++.+.+....-.|
T Consensus 111 ~rP-~~~iki~Gq~~e-~LlDTGAD~TVl~-----~~~lp-g~w~p--k~igGiGg~i-~v~qy~~i~iei~g~~~~~tv 179 (203)
T 3ka2_A 111 KRP-LVTIRIGGQLKE-ALLDTGADDTVIE-----ELNLP-GXWKP--KLIGGIGGFI-KVRQYDQIPVEIXGHKAIGTV 179 (203)
T ss_dssp SCC-EEEEEETTEEEE-EEECTTCSSCEEC-----SCCCC-SCCEE--EEEEETTEEE-EEEEEEEEEEEETTEEEEEEE
T ss_pred CCC-cEEEEECCEEEe-eeecccCCceeee-----cccCC-CCCCc--eEEeeccceE-EEEEeccEEEEECCeEEEEEE
Confidence 344 477999998766 9999999888873 22222 12222 2566665532 222223477777777766677
Q ss_pred EEEeeCCceeeEEcchhhhhcccc
Q 045020 145 LVVKATSPYNVILGRQWIHKMRAV 168 (221)
Q Consensus 145 ~Vvd~~~~yn~ILGr~wL~~~~~i 168 (221)
.|- +.|.| |+||..|.++++-
T Consensus 180 lVg--ptPvn-iiGRn~LtqlG~t 200 (203)
T 3ka2_A 180 LVG--PTPVN-IIGRNLLTQIGXT 200 (203)
T ss_dssp EES--CCSSC-EECHHHHGGGTCE
T ss_pred EEC--CCCcC-eechhhHHHhCCe
Confidence 774 45655 7899999998874
No 12
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=91.40 E-value=0.22 Score=37.34 Aligned_cols=89 Identities=17% Similarity=0.234 Sum_probs=42.9
Q ss_pred EcCeeeeEEEecCCCccccccHHHHHhhccccc--cccccccceecccCCcccccceeeEEEEEcCe--eEEEEEEEEee
Q 045020 74 IGNCLVKRILIDNGSSVNILDDATVEKMRLEQD--KIKLFEQPLIGLSGIVTNSDGVITLLVIAKSY--SLLTDFLVVKA 149 (221)
Q Consensus 74 I~~~~v~riLVD~GSsvnil~~~~~~~mg~~~~--~L~~~~~~l~gf~g~~~~~lG~i~L~v~~g~~--t~~~~F~Vvd~ 149 (221)
|++..+. .|+|+||-..++.. +..+.. .+......+.|.+|....-.-...+++.+-+. ...-.+.|...
T Consensus 27 i~gq~~e-aLLDTGAD~TVl~~-----~~lP~~W~k~~~~~~~igGIGG~i~v~qy~~~i~iei~g~~g~~~~tvlV~P~ 100 (124)
T 2rsp_A 27 QRSVYIT-ALLDSGADITIISE-----EDWPTDWPVMEAANPQIHGIGGGIPMRKSRDMIELGVINRDGSLERPLLLFPA 100 (124)
T ss_dssp CSEEEEE-EEECTTCSSCEEET-----TTSCTTSCEEECC---------CCCEEEESSCEEEEEECTTSCBCCCEEECCE
T ss_pred CCCEEEE-EEecCCCCcEEEec-----ccCCCcceeeccccceeeecCceEeeEEeCCceEEEEeCCCCcEEEEEEECcC
Confidence 7777666 99999999888863 222211 11111113777766432222222455555322 22222334321
Q ss_pred --CCceeeEEcchhhhhccccc
Q 045020 150 --TSPYNVILGRQWIHKMRAVP 169 (221)
Q Consensus 150 --~~~yn~ILGr~wL~~~~~i~ 169 (221)
..|.| |+||..|.++++.-
T Consensus 101 ~~~tPvn-IiGRdlLtqlG~tL 121 (124)
T 2rsp_A 101 VAMVRGS-ILGRDCLQGLGLRL 121 (124)
T ss_dssp EESCSSE-EECHHHHHHTTCEE
T ss_pred CCCCcee-EECHhHHhhCCcEE
Confidence 14555 89999999998754
No 13
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=79.46 E-value=2.1 Score=31.41 Aligned_cols=88 Identities=16% Similarity=0.231 Sum_probs=48.0
Q ss_pred EEEEEEc-----CeeeeEEEecCCCccccccHHHHHhhccccc-cccccccceecccCCcccccceeeEEEEE-c-----
Q 045020 69 VISIKIG-----NCLVKRILIDNGSSVNILDDATVEKMRLEQD-KIKLFEQPLIGLSGIVTNSDGVITLLVIA-K----- 136 (221)
Q Consensus 69 ~i~~~I~-----~~~v~riLVD~GSsvnil~~~~~~~mg~~~~-~L~~~~~~l~gf~g~~~~~lG~i~L~v~~-g----- 136 (221)
.+++.|+ +..+. .|+|+|+-..++.. +..+.. +.+++ ..+.|.+|.. .+.=....|+++ +
T Consensus 12 lvtikI~~~~~~Gq~~e-aLLDTGADdTVl~~-----~~lPg~Wkp~~t-kiiGGiGg~~-~~~qs~~~pv~i~lpfr~~ 83 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIE-ALLDTGADMTVIPI-----ALFSSNTPLKNT-SVLGAGGQTQ-DHFKLTSLPVLIRLPFRTT 83 (116)
T ss_dssp EEEEEEECSSSCCEEEE-EEECTTBSSCEEEG-----GGSCTTCCEEEC-CEEETTEEES-SSEEEESSCEEEECTTCCS
T ss_pred eEEEEEccccCCCeEeE-EEeccCCCccEEec-----ccCCCCCccccc-ceEeecccce-eeeEecCCCeEEEeccCCc
Confidence 5788888 88776 89999998888763 333321 22223 4455554432 222223344443 3
Q ss_pred CeeEEEEEEEEeeCCceeeEEcchhhhhccc
Q 045020 137 SYSLLTDFLVVKATSPYNVILGRQWIHKMRA 167 (221)
Q Consensus 137 ~~t~~~~F~Vvd~~~~yn~ILGr~wL~~~~~ 167 (221)
+++.. -..||...+. .||||+.|...+.
T Consensus 84 pv~l~--~~lv~~~~~w-~iigRd~l~q~q~ 111 (116)
T 3liy_A 84 PIVLT--SCLVDTKNNW-AIIGRDALQQCQG 111 (116)
T ss_dssp CEEES--SCEEETTSCC-CEECHHHHHHTTC
T ss_pred ceeec--eEEEcCCCce-eEechhHHhhhcc
Confidence 12222 2234433232 5899999877654
No 14
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=45.72 E-value=24 Score=24.34 Aligned_cols=30 Identities=23% Similarity=0.212 Sum_probs=22.7
Q ss_pred CceEEEEEEc--CeeeeEEEecCCCccccccHH
Q 045020 66 DALVISIKIG--NCLVKRILIDNGSSVNILDDA 96 (221)
Q Consensus 66 ~~L~i~~~I~--~~~v~riLVD~GSsvnil~~~ 96 (221)
-..++.+.|| ...+. +++|+||+.-.++..
T Consensus 13 ~~Y~~~i~iGTP~Q~~~-v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 13 AQYYGEIGIGTPPQCFT-VVFDTGSSNLWVPSI 44 (97)
T ss_dssp TEEEEEEEETTTTEEEE-EEEETTCCCEEEEBT
T ss_pred CeEEEEEEECCCCeEEE-EEEeCCCCceEEeEc
Confidence 3467788998 55554 999999998877643
No 15
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=45.40 E-value=1.1e+02 Score=25.26 Aligned_cols=96 Identities=23% Similarity=0.251 Sum_probs=51.5
Q ss_pred CCCceEEEEEEc--CeeeeEEEecCCCccccccHHH--H---------Hhh----cccccccc---ccccce-ecccCCc
Q 045020 64 HDDALVISIKIG--NCLVKRILIDNGSSVNILDDAT--V---------EKM----RLEQDKIK---LFEQPL-IGLSGIV 122 (221)
Q Consensus 64 h~~~L~i~~~I~--~~~v~riLVD~GSsvnil~~~~--~---------~~m----g~~~~~L~---~~~~~l-~gf~g~~ 122 (221)
..-..++.+.|| ...+ ++++|+||+.-.++.+- - ... .+.++.-. +.+... ..| |..
T Consensus 10 ~~~~Y~~~i~iGtP~q~~-~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Y-g~g 87 (342)
T 3pvk_A 10 EQVTYAADITVGSNNQKL-NVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLNTPFKIGY-GDG 87 (342)
T ss_dssp CSSSEEEEEEETTTTEEE-EEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEEEEEEEEC-SSS
T ss_pred CCcEEEEEEEEcCCCcEE-EEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecCCeEEEEe-cCC
Confidence 344577889998 4555 49999999988776331 0 000 11111100 000000 112 122
Q ss_pred ccccceee-EEEEEcCeeE-EEEEEEEeeCCceeeEEcchh
Q 045020 123 TNSDGVIT-LLVIAKSYSL-LTDFLVVKATSPYNVILGRQW 161 (221)
Q Consensus 123 ~~~lG~i~-L~v~~g~~t~-~~~F~Vvd~~~~yn~ILGr~w 161 (221)
....|.+. =.|++|+.+. +..|-++.....++-|||-.+
T Consensus 88 s~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~GilGLg~ 128 (342)
T 3pvk_A 88 SSSQGTLYKDTVGFGGVSIKNQVLADVDSTSIDQGILGVGY 128 (342)
T ss_dssp CEEEEEEEEEEEEETTEEEEEEEEEEEEEESSSSCEEECSC
T ss_pred CeEEEEEEEEEEEECCEEecceEEEEEEccCCCccEEEecC
Confidence 22445442 3456677654 588888887777788887653
No 16
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=44.32 E-value=89 Score=25.95 Aligned_cols=96 Identities=20% Similarity=0.167 Sum_probs=52.3
Q ss_pred CCCceEEEEEEc--CeeeeEEEecCCCccccccHHH---H------Hhhcccccccc---ccccce-ecccCCcccccce
Q 045020 64 HDDALVISIKIG--NCLVKRILIDNGSSVNILDDAT---V------EKMRLEQDKIK---LFEQPL-IGLSGIVTNSDGV 128 (221)
Q Consensus 64 h~~~L~i~~~I~--~~~v~riLVD~GSsvnil~~~~---~------~~mg~~~~~L~---~~~~~l-~gf~g~~~~~lG~ 128 (221)
+....++.+.|| ...+ ++++|+||+.-.++.+- - ..=.+.++.-. +.+... ..| |......|.
T Consensus 10 ~~~~Y~~~i~iGtP~Q~~-~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Y-g~gs~~~G~ 87 (339)
T 3fv3_A 10 EGPSYASKVSVGSNKQQQ-TVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNLGAAFTIRY-GDGSTSQGT 87 (339)
T ss_dssp CSSSEEEEEEETTTTEEE-EEEEETTCCCEEEEEEEEEECTTCCTTTTCCBCGGGCTTCEEEEEEEEEEC-TTSCEEEEE
T ss_pred CCCEEEEEEEEcCCCcEE-EEEEeCCCCceEEecCCCCCCCCCCCCCCCcCCCccCcceeeCCceEEEEE-CCCceEEEE
Confidence 344578899998 4555 49999999988776321 0 00011111100 001111 112 222234555
Q ss_pred ee-EEEEEcCeeE-EEEEEEEeeCCceeeEEcchh
Q 045020 129 IT-LLVIAKSYSL-LTDFLVVKATSPYNVILGRQW 161 (221)
Q Consensus 129 i~-L~v~~g~~t~-~~~F~Vvd~~~~yn~ILGr~w 161 (221)
+. =.|++|+.+. +..|-++.....++-|||-.+
T Consensus 88 ~~~D~v~~g~~~v~~~~fg~~~~~~~~~GilGLg~ 122 (339)
T 3fv3_A 88 WGKDTVTINGVSITGQQIADVTQTSVDQGILGIGY 122 (339)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEEESSSSCEEECSC
T ss_pred EEEEEEEECCEEECceEEEEEEecCCCceeEEecC
Confidence 43 4466777654 588888887777778887644
No 17
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=42.52 E-value=1e+02 Score=27.38 Aligned_cols=92 Identities=18% Similarity=0.227 Sum_probs=50.3
Q ss_pred ceEEEEEEc--CeeeeEEEecCCCccccccHHHHH--hh----cccccccc---ccccce-ecccCCcccccceee-EEE
Q 045020 67 ALVISIKIG--NCLVKRILIDNGSSVNILDDATVE--KM----RLEQDKIK---LFEQPL-IGLSGIVTNSDGVIT-LLV 133 (221)
Q Consensus 67 ~L~i~~~I~--~~~v~riLVD~GSsvnil~~~~~~--~m----g~~~~~L~---~~~~~l-~gf~g~~~~~lG~i~-L~v 133 (221)
..++.+.|| ...+ ++++|+||+.-.++...-. .. .+.++.-. +.+... ..|. ... ..|.+. =.|
T Consensus 138 ~Y~~~I~IGTPpQ~~-~vi~DTGSs~lWV~s~~C~s~~C~~~~~ydps~SsT~~~~~~~f~i~Yg-dGs-~~G~~~~Dtv 214 (451)
T 3qvc_A 138 LSFGEAKLGDNGQKF-NFLFHTASSNVWVPSIKCTSESCESKNHYDSSKSKTYEKDDTPVKLTSK-AGT-ISGIFSKDLV 214 (451)
T ss_dssp EEEEEEEETTTTEEE-EEEEESSBCSEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEEEEEEEECS-SEE-EEEEEEEEEE
T ss_pred EEEEEEEECCCCcEE-EEEEcCCCccEEEecCCCCccccCCCCCCCCCCCcccccCCCEEEEEEC-CCE-EEEEEEEEEE
Confidence 467899999 4555 4999999998888753110 01 11111100 011111 1122 222 455543 346
Q ss_pred EEcCeeEEEEEEEEee----C-----CceeeEEcchh
Q 045020 134 IAKSYSLLTDFLVVKA----T-----SPYNVILGRQW 161 (221)
Q Consensus 134 ~~g~~t~~~~F~Vvd~----~-----~~yn~ILGr~w 161 (221)
++|+.+....|.+++. . .+++-|||-.+
T Consensus 215 ~igg~~v~~~Fg~a~~t~~~~~~f~~~~~dGILGLg~ 251 (451)
T 3qvc_A 215 TIGKLSVPYKFIEMTEIVGFEPFYSESDVDGVFGLGW 251 (451)
T ss_dssp EETTEEEEEEEEEEEEEEECTTHHHHSCCCEEEECSS
T ss_pred EECCEEEEEEEEEEEeccccCCCccCCCCCEEEecCC
Confidence 6788776688888876 2 35677887644
No 18
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=39.68 E-value=1.2e+02 Score=25.15 Aligned_cols=95 Identities=21% Similarity=0.157 Sum_probs=51.0
Q ss_pred CCceEEEEEEc--CeeeeEEEecCCCccccccHH--HHH---------hh----cccccccc---ccccce-ecccCCcc
Q 045020 65 DDALVISIKIG--NCLVKRILIDNGSSVNILDDA--TVE---------KM----RLEQDKIK---LFEQPL-IGLSGIVT 123 (221)
Q Consensus 65 ~~~L~i~~~I~--~~~v~riLVD~GSsvnil~~~--~~~---------~m----g~~~~~L~---~~~~~l-~gf~g~~~ 123 (221)
.-..++.+.|| ...+. +++|+||+.-.++.+ .-. .. .+.++.-. +.++.. ..| |...
T Consensus 11 ~~~Y~~~i~iGtP~q~~~-v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Y-g~Gs 88 (342)
T 2qzx_A 11 AITYTADITVGSDNQKLN-VIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLNTRFDIKY-GDGS 88 (342)
T ss_dssp SSCEEEEEEETTTTEEEE-EEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEEEEEEEEC-TTSC
T ss_pred CeEEEEEEEECCCCcEEE-EEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCCCcEEEEe-CCCC
Confidence 34567889998 55555 999999998777633 000 00 11111110 001111 112 2222
Q ss_pred cccceee-EEEEEcCee-EEEEEEEEeeCCceeeEEcchh
Q 045020 124 NSDGVIT-LLVIAKSYS-LLTDFLVVKATSPYNVILGRQW 161 (221)
Q Consensus 124 ~~lG~i~-L~v~~g~~t-~~~~F~Vvd~~~~yn~ILGr~w 161 (221)
...|.+. =.|++|+.+ .+..|-++.....++-|||-.+
T Consensus 89 ~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~GilGLg~ 128 (342)
T 2qzx_A 89 YAKGKLYKDTVGIGGVSVRDQLFANVWSTSARKGILGIGF 128 (342)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEEECSSSCEEECSC
T ss_pred eEEEEEEEEEEEECCEEecceEEEEEEecCCCcCEEEEcc
Confidence 2345442 345667665 4678888887677788887544
No 19
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=38.34 E-value=92 Score=26.57 Aligned_cols=30 Identities=13% Similarity=0.295 Sum_probs=23.7
Q ss_pred EEEcCeee-----eEEEecCCCccccccHHHHHhh
Q 045020 72 IKIGNCLV-----KRILIDNGSSVNILDDATVEKM 101 (221)
Q Consensus 72 ~~I~~~~v-----~riLVD~GSsvnil~~~~~~~m 101 (221)
+.+++..+ ..++||+|++.-.+|...++.+
T Consensus 241 i~v~g~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i 275 (370)
T 3psg_A 241 ITMDGETIACSGGCQAIVDTGTSLLTGPTSAIANI 275 (370)
T ss_dssp EESSSSEEECTTCEEEEECTTCCSEEEEHHHHHHH
T ss_pred EEECCEEEecCCCceEEEcCCCCcEECCHHHHHHH
Confidence 35666544 2589999999999999988886
No 20
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=36.38 E-value=1.3e+02 Score=24.90 Aligned_cols=33 Identities=21% Similarity=0.176 Sum_probs=24.9
Q ss_pred CCCCceEEEEEEc--CeeeeEEEecCCCccccccHH
Q 045020 63 PHDDALVISIKIG--NCLVKRILIDNGSSVNILDDA 96 (221)
Q Consensus 63 ~h~~~L~i~~~I~--~~~v~riLVD~GSsvnil~~~ 96 (221)
.++-..++.+.|| ...+. +++|+||+.-.++.+
T Consensus 12 ~~~~~Y~~~i~iGTP~q~~~-v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 12 GNDIEYYGQVTIGTPGKKFN-LDFDTGSSDLWIAST 46 (325)
T ss_dssp TTTTEEEEEEEETTTTEEEE-EEEETTCCCCEEEBT
T ss_pred CCCCEEEEEEEECCCCeEEE-EEEcCCCCCEEEccC
Confidence 3444567899999 66665 999999998877643
No 21
>2l7y_A Putative endo-beta-N-acetylglucosaminidase; putative surface protein, structural protein; NMR {Streptococcus pneumoniae}
Probab=36.05 E-value=76 Score=22.34 Aligned_cols=57 Identities=14% Similarity=0.066 Sum_probs=39.6
Q ss_pred EcCeeeeEEEecCCCccccccHHHHHhhccccccccccccceecccCCcccccceeeEEEEEcCeeEEEEEEEEe
Q 045020 74 IGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVK 148 (221)
Q Consensus 74 I~~~~v~riLVD~GSsvnil~~~~~~~mg~~~~~L~~~~~~l~gf~g~~~~~lG~i~L~v~~g~~t~~~~F~Vvd 148 (221)
+.|-.|. +.-+.|++.-+ .|...+..++||+.+. .|.-+|.|++++.+......|.+
T Consensus 27 ltGl~v~-~~YsDgt~~~~--------------~lt~~~v~VsGfDs~~---~G~QtlTVtY~G~t~~f~V~V~~ 83 (98)
T 2l7y_A 27 LSEGRFA-VAYSNDTMEEH--------------SFTDEGVEISGYDAQK---TGRQTLTLHYQGHEVSFDVLVSP 83 (98)
T ss_dssp CCSCEEE-EEETTSCEEEE--------------ESCCTTSEEESCCTTS---CSSEEEEEEETTEEEEEEEEEEC
T ss_pred cCCCEEE-EEEcCCCEEEE--------------ecccCCcEEEccCCCC---CCcEEEEEEECCEEEEEEEEEEe
Confidence 3344444 66777775421 3566777999999764 79999999999988665555554
No 22
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=34.76 E-value=1.5e+02 Score=24.62 Aligned_cols=95 Identities=23% Similarity=0.187 Sum_probs=50.7
Q ss_pred CCceEEEEEEc--CeeeeEEEecCCCccccccHH---HHH--------hh----cccccccc---ccccce-ecccCCcc
Q 045020 65 DDALVISIKIG--NCLVKRILIDNGSSVNILDDA---TVE--------KM----RLEQDKIK---LFEQPL-IGLSGIVT 123 (221)
Q Consensus 65 ~~~L~i~~~I~--~~~v~riLVD~GSsvnil~~~---~~~--------~m----g~~~~~L~---~~~~~l-~gf~g~~~ 123 (221)
.-..++.+.|| ...+. +++|+||+.-.++.+ .-. .. .+.++.-. +.++.. ..| |...
T Consensus 11 ~~~Y~~~i~iGtP~q~~~-v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Y-g~Gs 88 (334)
T 1j71_A 11 GPSYAADIVVGSNQQKQT-VVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLNQDFSIEY-GDLT 88 (334)
T ss_dssp SSSEEEEEEETTTTEEEE-EEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEEEEEEEEB-TTSC
T ss_pred CcEEEEEEEEcCCCcEEE-EEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCCCceEEEE-CCCC
Confidence 34567889998 55555 999999998877633 100 00 01111100 001110 112 2222
Q ss_pred cccceee-EEEEEcCee-EEEEEEEEeeCCceeeEEcchh
Q 045020 124 NSDGVIT-LLVIAKSYS-LLTDFLVVKATSPYNVILGRQW 161 (221)
Q Consensus 124 ~~lG~i~-L~v~~g~~t-~~~~F~Vvd~~~~yn~ILGr~w 161 (221)
...|.+. =.|++|+.+ .+..|-++.....++-|||-.+
T Consensus 89 ~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~GilGLg~ 128 (334)
T 1j71_A 89 SSQGSFYKDTVGFGGISIKNQQFADVTTTSVDQGIMGIGF 128 (334)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEEESSSSCEEECSC
T ss_pred EEEEEEEEEEEEECCEEEccEEEEEEEecCCCccEEEEcC
Confidence 2345442 345567664 4678888877667788887544
No 23
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=34.63 E-value=1.9e+02 Score=25.56 Aligned_cols=93 Identities=19% Similarity=0.227 Sum_probs=50.5
Q ss_pred CceEEEEEEc--CeeeeEEEecCCCccccccHHHHH--hh----cccccccc---ccccc-eecccCCcccccceee-EE
Q 045020 66 DALVISIKIG--NCLVKRILIDNGSSVNILDDATVE--KM----RLEQDKIK---LFEQP-LIGLSGIVTNSDGVIT-LL 132 (221)
Q Consensus 66 ~~L~i~~~I~--~~~v~riLVD~GSsvnil~~~~~~--~m----g~~~~~L~---~~~~~-l~gf~g~~~~~lG~i~-L~ 132 (221)
-..++.+.|| ...+. +++|+||+.-.++...-. .. .+.++.-. +.++. -..|. ... ..|.+. =.
T Consensus 138 ~~Y~~~I~IGTP~Q~~~-vi~DTGSs~lWV~~~~C~~~~C~~~~~ydps~SsT~~~~~~~~~i~Yg-dGs-~~G~~~~Dt 214 (453)
T 2bju_A 138 IMFYGDAEVGDNQQPFT-FILDTGSANLWVPSVKCTTAGCLTKHLYDSSKSRTYEKDGTKVEMNYV-SGT-VSGFFSKDL 214 (453)
T ss_dssp TEEEEEEEETTTTEEEE-EEEETTCCCEEEEBTTCCSTTGGGSCCBCGGGCTTCEEEEEEEEEECS-SSE-EEEEEEEEE
T ss_pred CEEEEEEEECCCCeEEE-EEEECCCcceEEeccCCCccccCCCCcCCCccCCceeECCcEEEEEcC-CCC-eEEEEEEEE
Confidence 3467788898 55555 999999998887754111 01 01111100 00111 11222 111 345553 34
Q ss_pred EEEcCeeEEEEEEEEeeCC---------ceeeEEcchh
Q 045020 133 VIAKSYSLLTDFLVVKATS---------PYNVILGRQW 161 (221)
Q Consensus 133 v~~g~~t~~~~F~Vvd~~~---------~yn~ILGr~w 161 (221)
|++|+.+....|-++.... +++-|||-.+
T Consensus 215 v~ig~~~v~~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~ 252 (453)
T 2bju_A 215 VTVGNLSLPYKFIEVIDTNGFEPTYTASTFDGILGLGW 252 (453)
T ss_dssp EEETTEEEEEEEEEEEECGGGTTHHHHSSCCEEEECSC
T ss_pred EEEeCcEEEEEEEEEEEecccCccccccCCceeEeccC
Confidence 6677776668888887653 4678887654
No 24
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=28.53 E-value=2.3e+02 Score=24.97 Aligned_cols=35 Identities=14% Similarity=0.315 Sum_probs=26.0
Q ss_pred eEEEEEEcCe--eeeEEEecCCCccccccHHHHHhhc
Q 045020 68 LVISIKIGNC--LVKRILIDNGSSVNILDDATVEKMR 102 (221)
Q Consensus 68 L~i~~~I~~~--~v~riLVD~GSsvnil~~~~~~~mg 102 (221)
+.+++.+++. .-..+++|+|++.-.+|...++++-
T Consensus 318 v~l~I~Vgg~~~~~~~aiiDSGTt~i~lP~~~~~~i~ 354 (451)
T 3qvc_A 318 VDLDVHFGNVSSKKANVILDSATSVITVPTEFFNQFV 354 (451)
T ss_dssp EEEEEEETTEEEEEEEEEECTTBSSEEECHHHHHHHH
T ss_pred EEEEEEECCccCCCceEEEeCCCccccCCHHHHHHHH
Confidence 3334556654 2245999999999999999998873
No 25
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=28.03 E-value=52 Score=26.19 Aligned_cols=30 Identities=23% Similarity=0.278 Sum_probs=24.3
Q ss_pred EEEcCeee------eEEEecCCCccccccHHHHHhh
Q 045020 72 IKIGNCLV------KRILIDNGSSVNILDDATVEKM 101 (221)
Q Consensus 72 ~~I~~~~v------~riLVD~GSsvnil~~~~~~~m 101 (221)
+.|++..+ ..++||+|++.-.+|.++++++
T Consensus 197 i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~~~~~i 232 (239)
T 1b5f_A 197 VLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQI 232 (239)
T ss_dssp EEETTEECCTTTTCEEEEECTTCSSEEECHHHHHHH
T ss_pred EEECCEEecccCCCCEEEEecCcchhhCCHHHHHHH
Confidence 45677654 3689999999999999998876
No 26
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=24.39 E-value=2e+02 Score=23.85 Aligned_cols=68 Identities=19% Similarity=0.143 Sum_probs=0.0
Q ss_pred cCCCCCceEEEEEEc--CeeeeEEEecCCCccccccHHHHHhhccccccccccccceecccCCcccccceeeEEEEEcCe
Q 045020 61 QSPHDDALVISIKIG--NCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFEQPLIGLSGIVTNSDGVITLLVIAKSY 138 (221)
Q Consensus 61 ~~~h~~~L~i~~~I~--~~~v~riLVD~GSsvnil~~~~~~~mg~~~~~L~~~~~~l~gf~g~~~~~lG~i~L~v~~g~~ 138 (221)
..+.....++.+.|| ...+. +++|+||+.-.++.. ..|+.+...........+++|..
T Consensus 7 l~n~~~~Y~~~i~iGTP~q~~~-v~~DTGSs~lWv~~~-------------------~~y~~s~Ss~~~~~~~~i~Yg~G 66 (340)
T 1wkr_A 7 ATNQLVDYVVNVGVGSPATTYS-LLVDTGSSNTWLGAD-------------------KSYVKTSTSSATSDKVSVTYGSG 66 (340)
T ss_dssp EEECSSCEEEEEEETTTTEEEE-EEEETTCCCCEECSS-------------------SCCCCCTTCEEEEEEEEEECSSC
T ss_pred eeccCcEEEEEEEECCCCcEEE-EEEeCCChhheecCC-------------------CccCCcCCccccCceEEEEECCc
Q ss_pred eEEEEEEEEee
Q 045020 139 SLLTDFLVVKA 149 (221)
Q Consensus 139 t~~~~F~Vvd~ 149 (221)
+ ..=+++-|.
T Consensus 67 s-~~G~~~~Dt 76 (340)
T 1wkr_A 67 S-FSGTEYTDT 76 (340)
T ss_dssp E-EEEEEEEEE
T ss_pred E-EEEEEEEEE
No 27
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=23.94 E-value=70 Score=25.18 Aligned_cols=31 Identities=16% Similarity=0.338 Sum_probs=24.7
Q ss_pred EEEEcCeee-----eEEEecCCCccccccHHHHHhh
Q 045020 71 SIKIGNCLV-----KRILIDNGSSVNILDDATVEKM 101 (221)
Q Consensus 71 ~~~I~~~~v-----~riLVD~GSsvnil~~~~~~~m 101 (221)
.+.+++..+ ..+++|+|++.-.+|.+.++++
T Consensus 107 ~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l 142 (241)
T 1lya_B 107 QVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVREL 142 (241)
T ss_dssp EEEETTSCEESTTCEEEEECTTCSSEEECHHHHHHH
T ss_pred EEEECCeeEeccCCCEEEEECCCccccCCHHHHHHH
Confidence 356777653 3589999999999999988876
No 28
>1q1o_A Cell division control protein 24; PB1 domain, PCCR, PC motif, OPCA motif, yeast, cell polarity, protein-protein interaction; NMR {Saccharomyces cerevisiae} SCOP: d.15.2.2 PDB: 2kfj_A 2kfk_B
Probab=23.42 E-value=1.7e+02 Score=20.52 Aligned_cols=67 Identities=15% Similarity=0.048 Sum_probs=38.3
Q ss_pred ccceeeEEEEEcCee-----EEEEEEEEeeCCceeeEEcchhhhhcccc--ccC-ccceeeeecCCcEEEEecCHH
Q 045020 125 SDGVITLLVIAKSYS-----LLTDFLVVKATSPYNVILGRQWIHKMRAV--PST-CHQVLCYQTIYGIEEIRGDQA 192 (221)
Q Consensus 125 ~lG~i~L~v~~g~~t-----~~~~F~Vvd~~~~yn~ILGr~wL~~~~~i--~st-~~q~vk~~~~~g~i~l~g~~~ 192 (221)
|+|.+.+.|.+++.+ -.+...+|...-.|+-++.+= -.+++.- .+. --.++||..++|-...-+++.
T Consensus 2 ~~~sikVKv~y~~~~~~~~~~d~~~i~V~~~i~f~~L~~kI-~~Kl~~~~~~~i~~~~klkYkDEdGD~Vtl~sdd 76 (98)
T 1q1o_A 2 PLGSILFRISYNNNSNNTSSSEIFTLLVEKVWNFDDLIMAI-NSKISNTHNNNISPITKIKYQDEDGDFVVLGSDE 76 (98)
T ss_dssp CSSCEEEEEEECSSCSSCCCCEEEEEEECTTCCHHHHHHHH-HHHHHHHCSSCCCCCCCEEEECSSSCEEEECSHH
T ss_pred CCccEEEEEEecCcccccccCcEEEEEecCCCCHHHHHHHH-HHHHcCCccccccceeEEEEEcCCCCEEEEcCHH
Confidence 678888999988432 345555666566665444321 0122221 111 346899999998655445554
No 29
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=22.89 E-value=77 Score=26.32 Aligned_cols=96 Identities=13% Similarity=0.144 Sum_probs=51.8
Q ss_pred CCCceEEEEEEcCeeeeEEEecCCCccccccHHHHHhh------cccccccc--ccccce-ecccCCcccccceee-EEE
Q 045020 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM------RLEQDKIK--LFEQPL-IGLSGIVTNSDGVIT-LLV 133 (221)
Q Consensus 64 h~~~L~i~~~I~~~~v~riLVD~GSsvnil~~~~~~~m------g~~~~~L~--~~~~~l-~gf~g~~~~~lG~i~-L~v 133 (221)
++-..++.+.||...+ ++++|+||+.-.++.+--... .+.++.-. ..+... ..| |......|.+. =.|
T Consensus 12 ~~~~Y~~~i~iG~Q~~-~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss~~~~~~~~~i~Y-g~Gs~~~G~~~~D~v 89 (325)
T 1ibq_A 12 NDEEYLTPVTVGKSTL-HLDFDTGSADLWVFSDELPSSEQTGHDLYTPSSSATKLSGYSWDISY-GDGSSASGDVYRDTV 89 (325)
T ss_dssp TTSCEEEEEEEBTEEE-EEEEETTCCCEEEECTTSCHHHHTTSCCCBCCSSCEECTTCBEEEEC-SSSCEEEEEEEEEEE
T ss_pred CCCEEEEEEEECCEEE-EEEEeCCCccceEeeCCCCccccCCCCCCCchhcCCccCCCEEEEEe-CCCCEEEEEEEEeEE
Confidence 4445678899995555 499999999888775321111 12221111 011111 112 22222345442 346
Q ss_pred EEcCeeE-EEEEEEEeeC-------CceeeEEcchh
Q 045020 134 IAKSYSL-LTDFLVVKAT-------SPYNVILGRQW 161 (221)
Q Consensus 134 ~~g~~t~-~~~F~Vvd~~-------~~yn~ILGr~w 161 (221)
++|+.+. +..|-++... ..++-|||-.+
T Consensus 90 ~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 125 (325)
T 1ibq_A 90 TVGGVTTNKQAVEAASKISSEFVQDTANDGLLGLAF 125 (325)
T ss_dssp EETTEEEEEEEEEEEEEECHHHHTSTTCCEEEECSC
T ss_pred EECCEEEcceEEEEEEecCccccccCCCceEEEeCc
Confidence 6677654 5778888653 25678888654
No 30
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=22.44 E-value=89 Score=25.94 Aligned_cols=31 Identities=16% Similarity=0.500 Sum_probs=25.6
Q ss_pred EEEEcCeee----eEEEecCCCccccccHHHHHhh
Q 045020 71 SIKIGNCLV----KRILIDNGSSVNILDDATVEKM 101 (221)
Q Consensus 71 ~~~I~~~~v----~riLVD~GSsvnil~~~~~~~m 101 (221)
.+.+++..+ ..+++|+|++.-.+|..+++++
T Consensus 200 ~i~v~g~~~~~~~~~~iiDSGtt~~~lP~~~~~~i 234 (342)
T 3pvk_A 200 SVEVSGKTINTDNVDVLLDSGTTITYLQQDLADQI 234 (342)
T ss_dssp EEEETTEEEEEEEEEEEECTTCSSEEECHHHHHHH
T ss_pred EEEECCEEecCCCceEEEeCCCCCeecCHHHHHHH
Confidence 356777765 3689999999999999998887
No 31
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=21.54 E-value=3.3e+02 Score=22.11 Aligned_cols=101 Identities=20% Similarity=0.165 Sum_probs=0.0
Q ss_pred CCCCCcCCCCCceEEEEEEc--CeeeeEEEecCCCccccccH------HHHHhhccccccccccccceeccc---CCccc
Q 045020 56 DLKLIQSPHDDALVISIKIG--NCLVKRILIDNGSSVNILDD------ATVEKMRLEQDKIKLFEQPLIGLS---GIVTN 124 (221)
Q Consensus 56 d~~~~~~~h~~~L~i~~~I~--~~~v~riLVD~GSsvnil~~------~~~~~mg~~~~~L~~~~~~l~gf~---g~~~~ 124 (221)
+......-.+-..++.+.|| ...+. +++|+||+.-.++. .....-.+.++.-......=..|. |...
T Consensus 1 ~~~~l~n~~d~~Y~~~i~iGtP~Q~~~-v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs- 78 (320)
T 4aa9_A 1 AREPLTSYLDSQYFGKIYIGTPPQEFT-VVFDTGSSDLWVPSIYCKSNVCKNHHRFDPRKSSTFRNLGKPLSIHYGTGS- 78 (320)
T ss_dssp -------CCCCCCEEEEEETTTTEEEE-EEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEE-
T ss_pred CCccceeccCCEEEEEEEECCCCeEEE-EEEeCCCCceEEcCCCCCccccCCCCCCCCCCCcCeEcCCcEEEEEECCcE-
Q ss_pred ccceee-EEEEEcCeeEE-EEEEEEeeCCc-------eeeEEc
Q 045020 125 SDGVIT-LLVIAKSYSLL-TDFLVVKATSP-------YNVILG 158 (221)
Q Consensus 125 ~lG~i~-L~v~~g~~t~~-~~F~Vvd~~~~-------yn~ILG 158 (221)
..|.+. =.|++|+.+.. ..|-++..... ++-|||
T Consensus 79 ~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilG 121 (320)
T 4aa9_A 79 MEGFLGYDTVTVSNIVDPNQTVGLSTEQPGEVFTYSEFDGILG 121 (320)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEECCSHHHHSCCCSEEEE
T ss_pred EEEEEEEEEEEECCEeecCeEEEEEEEcccccccccCcccEEe
No 32
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=21.18 E-value=70 Score=26.61 Aligned_cols=96 Identities=13% Similarity=0.135 Sum_probs=51.2
Q ss_pred CCCceEEEEEEcCeeeeEEEecCCCccccccHHHHHhh------cccccccc--ccccce-ecccCCcccccceee-EEE
Q 045020 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM------RLEQDKIK--LFEQPL-IGLSGIVTNSDGVIT-LLV 133 (221)
Q Consensus 64 h~~~L~i~~~I~~~~v~riLVD~GSsvnil~~~~~~~m------g~~~~~L~--~~~~~l-~gf~g~~~~~lG~i~-L~v 133 (221)
++-..++.+.||...+ ++++|+||+.-.++.+--... .+.++.-. ..+... ..| |......|.+. =.|
T Consensus 13 ~~~~Y~~~i~iG~q~~-~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss~~~~~~~~~i~Y-g~Gs~~~G~~~~D~v 90 (323)
T 1izd_A 13 NDEEYITQVTVGDDTL-GLDFDTGSADLWVFSSQTPSSERSGHDYYTPGSSAQKIDGATWSISY-GDGSSASGDVYKDKV 90 (323)
T ss_dssp GGCCEEEEEEETTEEE-EEEEETTCCCEEECBTTSCHHHHTTCCCBCCCTTCEEEEEEEEEEEC-TTSCEEEEEEEEEEE
T ss_pred CCCEEEEEEEECCEEE-EEEEcCCCcceEEecCCCCcccccCCCCCCccccCCccCCCeEEEEc-CCCCeEEEEEEEEEE
Confidence 3444678899995555 599999999888775421111 12221111 001111 112 22222345443 345
Q ss_pred EEcCeeE-EEEEEEEeeC-------CceeeEEcchh
Q 045020 134 IAKSYSL-LTDFLVVKAT-------SPYNVILGRQW 161 (221)
Q Consensus 134 ~~g~~t~-~~~F~Vvd~~-------~~yn~ILGr~w 161 (221)
++|+.+. +..|-++... ..++-|||-.+
T Consensus 91 ~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 126 (323)
T 1izd_A 91 TVGGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAF 126 (323)
T ss_dssp EETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSC
T ss_pred EECCEEECceEEEEEEeccccccccCCCceEEecCc
Confidence 6677654 5788888754 35678887544
No 33
>2jys_A Protease/reverse transcriptase; retroviral protease, hydrolase; NMR {Simian foamy virus type 1}
Probab=21.05 E-value=2.2e+02 Score=19.96 Aligned_cols=83 Identities=14% Similarity=0.204 Sum_probs=47.4
Q ss_pred EEEEEcCeeeeEEEecCCCccccccHHHHHhhccccccccccc-cceecccCCcccccceeeEEEEEcCeeEEEEEEEEe
Q 045020 70 ISIKIGNCLVKRILIDNGSSVNILDDATVEKMRLEQDKIKLFE-QPLIGLSGIVTNSDGVITLLVIAKSYSLLTDFLVVK 148 (221)
Q Consensus 70 i~~~I~~~~v~riLVD~GSsvnil~~~~~~~mg~~~~~L~~~~-~~l~gf~g~~~~~lG~i~L~v~~g~~t~~~~F~Vvd 148 (221)
+.++|.|.++. .-.|+|+.+.-+|.+.+... +|-+ ..+...+|......=. |..++.+. .+.-.|+.
T Consensus 10 L~vEiKg~kLk-g~WDsGA~ITCiP~~fL~~E-------~PI~~~~I~TIHG~k~q~vYY--l~fKv~GR--KveaEVi~ 77 (107)
T 2jys_A 10 LEAEIKGTKLK-AHWDSGATITCVPEAFLEDE-------RPIQTMLIKTIHGEKQQDVYY--LTFKVQGR--KVEAEVLA 77 (107)
T ss_dssp EEEEETTEEEE-EEECTTCSSEEEEGGGTTTC-------CCSEEEEEECSSCEEEEEEEE--EEEEESSC--EEEEEEEE
T ss_pred eeEEEeCcEEE-EEecCCCeEEEcchHHhccc-------ccccceEEEEecCceeceEEE--EEEEEcCe--EEEEEEec
Confidence 68889999987 88999999999998866442 1222 3444556655443322 33333333 23344554
Q ss_pred eCCceeeEE--cchhhhh
Q 045020 149 ATSPYNVIL--GRQWIHK 164 (221)
Q Consensus 149 ~~~~yn~IL--Gr~wL~~ 164 (221)
..-.|-.|- --||+..
T Consensus 78 sp~dYvli~P~DiPW~~~ 95 (107)
T 2jys_A 78 SPYDYILLNPSDVPWLMK 95 (107)
T ss_dssp ESSSSEEECTTTCHHHHS
T ss_pred CcccEEEEcCcCcccccc
Confidence 444442221 3467654
No 34
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=20.99 E-value=1e+02 Score=25.55 Aligned_cols=31 Identities=19% Similarity=0.355 Sum_probs=25.2
Q ss_pred EEEEcCeee-----eEEEecCCCccccccHHHHHhh
Q 045020 71 SIKIGNCLV-----KRILIDNGSSVNILDDATVEKM 101 (221)
Q Consensus 71 ~~~I~~~~v-----~riLVD~GSsvnil~~~~~~~m 101 (221)
.+.+++..+ ..+++|+|++.-.+|..+++++
T Consensus 197 ~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l 232 (323)
T 3cms_A 197 SVTISGVVVACEGGCQAILDTGTSKLVGPSSDILNI 232 (323)
T ss_dssp EEEETTEEEESTTCEEEEECTTCCSEEECHHHHHHH
T ss_pred eEEECCEEeecCCCcEEEEecCCccEeCCHHHHHHH
Confidence 456787665 3699999999999999888776
No 35
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=20.84 E-value=73 Score=26.47 Aligned_cols=96 Identities=14% Similarity=0.152 Sum_probs=51.1
Q ss_pred CCCceEEEEEEcCeeeeEEEecCCCccccccHHHHHhh------cccccccc--ccccce-ecccCCcccccceee-EEE
Q 045020 64 HDDALVISIKIGNCLVKRILIDNGSSVNILDDATVEKM------RLEQDKIK--LFEQPL-IGLSGIVTNSDGVIT-LLV 133 (221)
Q Consensus 64 h~~~L~i~~~I~~~~v~riLVD~GSsvnil~~~~~~~m------g~~~~~L~--~~~~~l-~gf~g~~~~~lG~i~-L~v 133 (221)
++-..++.+.||...+ ++++|+||+.-.++.+--... .+.++.-. ..+... ..| |......|.+. =.|
T Consensus 13 ~~~~Y~~~i~iG~Q~~-~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss~~~~~~~~~i~Y-g~Gs~~~G~~~~D~v 90 (323)
T 1bxo_A 13 NDEEYITPVTIGGTTL-NLNFDTGSADLWVFSTELPASQQSGHSVYNPSATGKELSGYTWSISY-GDGSSASGNVFTDSV 90 (323)
T ss_dssp GGSCEEEEEEETTEEE-EEEEETTCCCEEECBTTSCHHHHTTSCCBCHHHHCEEEEEEEEEEEC-TTSCEEEEEEEEEEE
T ss_pred CCCEEEEEEEECCEEE-EEEEeCCCcceEEecCCCCchhccCCCCCCcccCCcccCCCeEEEEe-CCCCeEEEEEEEEEE
Confidence 3444678899995555 499999999887765321111 11111111 011111 112 22222345442 346
Q ss_pred EEcCeeE-EEEEEEEeeC-------CceeeEEcchh
Q 045020 134 IAKSYSL-LTDFLVVKAT-------SPYNVILGRQW 161 (221)
Q Consensus 134 ~~g~~t~-~~~F~Vvd~~-------~~yn~ILGr~w 161 (221)
++|+.+. +..|-++... ..++-|||-.+
T Consensus 91 ~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 126 (323)
T 1bxo_A 91 TVGGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAF 126 (323)
T ss_dssp EETTEEEEEEEEEEEEEECHHHHTCTTCSEEEECSC
T ss_pred EECCEEECcEEEEEEEecCcccccCCCCceEEEeCc
Confidence 6677653 5788888753 35678888654
No 36
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=20.81 E-value=1.5e+02 Score=21.88 Aligned_cols=36 Identities=11% Similarity=0.158 Sum_probs=27.7
Q ss_pred EEEEEcCeeeeE-EEecCCCccccccHHHHHhhcccc
Q 045020 70 ISIKIGNCLVKR-ILIDNGSSVNILDDATVEKMRLEQ 105 (221)
Q Consensus 70 i~~~I~~~~v~r-iLVD~GSsvnil~~~~~~~mg~~~ 105 (221)
+.+.|+++++.. +||.+...+||+=++.+.++|...
T Consensus 76 i~IeI~g~~~~~~~lV~~~tPvnLLGrd~Ltqlg~tL 112 (132)
T 3slz_A 76 RKVHLATGKVTHSFLHVPDCPYPLLGRDLLTKLKAQI 112 (132)
T ss_dssp EEEEETTEEEEECCEECTTSSSCEECHHHHHHHTCEE
T ss_pred eEEEECCeeecceEEEECCCCccEECHhhHhhCCcEE
Confidence 356677776643 377777889999999999998765
No 37
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=20.76 E-value=2.6e+02 Score=21.89 Aligned_cols=12 Identities=25% Similarity=0.443 Sum_probs=10.0
Q ss_pred EEEecCCCcccc
Q 045020 81 RILIDNGSSVNI 92 (221)
Q Consensus 81 riLVD~GSsvni 92 (221)
.+|||+|.....
T Consensus 54 ~iLiD~G~~~~~ 65 (276)
T 2r2d_A 54 TVLYDTGCHPEC 65 (276)
T ss_dssp EEEECCCSCTTC
T ss_pred CEEEECCCCccc
Confidence 599999988764
No 38
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=20.56 E-value=74 Score=26.57 Aligned_cols=25 Identities=24% Similarity=0.170 Sum_probs=0.0
Q ss_pred EEEEEEcCeeeeEEEecCCCcccccc
Q 045020 69 VISIKIGNCLVKRILIDNGSSVNILD 94 (221)
Q Consensus 69 ~i~~~I~~~~v~riLVD~GSsvnil~ 94 (221)
++.+.||...+. +++|+||+.-.++
T Consensus 20 ~~~i~iG~Q~~~-v~~DTGSs~lWv~ 44 (330)
T 1yg9_A 20 AGITKIGNQNFL-TVFDSTSCNVVVA 44 (330)
T ss_dssp EEEEEETTEEEE-EEEETTCCCEEEE
T ss_pred EEEEEECCEEEE-EEEeCCCcceEEe
No 39
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=20.52 E-value=95 Score=26.13 Aligned_cols=30 Identities=27% Similarity=0.385 Sum_probs=24.4
Q ss_pred EEEcCeee-----eEEE-ecCCCccccccHHHHHhh
Q 045020 72 IKIGNCLV-----KRIL-IDNGSSVNILDDATVEKM 101 (221)
Q Consensus 72 ~~I~~~~v-----~riL-VD~GSsvnil~~~~~~~m 101 (221)
+.|++..+ ..++ +|+|++.-.+|..+++++
T Consensus 218 i~v~~~~~~~~~~~~ai~iDSGTt~~~lP~~~~~~l 253 (361)
T 1mpp_A 218 VKIDGSDAVSFDGAQAFTIDTGTNFFIAPSSFAEKV 253 (361)
T ss_dssp EEETTEEEEEEEEEEEEEEETTCCSEEEEHHHHHHH
T ss_pred EEECCeeeccCCCCEEEEECCCCCceeCCHHHHHHH
Confidence 46777655 3478 999999999999988876
Done!