Query 045022
Match_columns 77
No_of_seqs 142 out of 662
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 15:51:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045022.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045022hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jon_A Beta-1,3-glucanase; oli 100.0 9.3E-32 3.2E-36 171.9 7.0 66 11-76 8-74 (101)
2 2w61_A GAS2P, glycolipid-ancho 99.9 2.6E-23 9E-28 162.0 5.0 63 14-76 396-464 (555)
3 2gsv_A Hypothetical protein YV 47.0 7.8 0.00027 22.9 1.3 9 62-70 28-36 (80)
4 2juy_A Neopetrosiamide A; amph 21.7 35 0.0012 16.2 1.0 13 34-46 5-17 (28)
5 1b9g_A Protein (growth factor 18.5 1E+02 0.0034 17.0 2.6 36 26-62 8-47 (57)
6 2wfu_B Probable insulin-like p 15.8 82 0.0028 14.7 1.5 14 25-38 7-20 (26)
7 1m5a_B Insulin B chain; alpha 14.9 62 0.0021 15.8 1.0 14 25-38 8-21 (30)
8 1pq1_B BCL2-like protein 11; B 14.4 59 0.002 16.2 0.8 9 63-71 18-26 (33)
9 1k8v_A Neuropeptide F; moniezi 11.6 82 0.0028 16.4 0.9 11 63-73 26-36 (40)
10 4fp4_A Polyprenyl synthetase; 10.8 55 0.0019 23.2 0.0 18 55-73 257-274 (285)
No 1
>2jon_A Beta-1,3-glucanase; olive pollen, allergen; NMR {Olea europaea}
Probab=99.97 E-value=9.3e-32 Score=171.91 Aligned_cols=66 Identities=42% Similarity=0.976 Sum_probs=62.4
Q ss_pred CCCceeEEeCCCCChHHHHHHHHhccCc-cccCccCCCCcCCCCCCchhhhhHHHHHHHHHccCCCC
Q 045022 11 EGQTTWCIVKPSTGDERLIANIQYCCDH-VDCSIIQPGGACYEPNNNYSHASVVMHLFYRANNKLPH 76 (77)
Q Consensus 11 ~~~~~wCVak~~~~~~~l~~~ld~aC~~-~dC~~I~~gg~C~~p~t~~~haSyAfN~Yyq~~~~~~~ 76 (77)
..+++|||+|+++++++||++|||||++ +||++|++||+||.|+++++|||||||+|||++++.++
T Consensus 8 ~~~~~wCVak~~~~~~~l~~~ldyACg~gaDC~~I~~gg~Cy~p~t~~~haSyAfN~YYq~~~~~~~ 74 (101)
T 2jon_A 8 KAAGSWCVPKPGVSDDQLTGNINYACSQGIDCGPIQPGGACFEPNTVKAHAAYVMNLYYQHAGRNSW 74 (101)
T ss_dssp CCCSCEEEECTTSCHHHHHHHHHHHTTTSSSSSTTCCCSSSCSSCCTTHHHHHHHHHHHHHHTSSGG
T ss_pred CCCCcEEEECCCCCHHHHHHHHHHHcCCCCCccccCcCCcccCCCCHHHHHHHHHHHHHHHcCCCCC
Confidence 3467899999999999999999999999 89999999999999999999999999999999988764
No 2
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A*
Probab=99.87 E-value=2.6e-23 Score=161.96 Aligned_cols=63 Identities=19% Similarity=0.284 Sum_probs=60.3
Q ss_pred ceeEEeCCC-CChHHHHHHHHhccCccccCccCCCCc-----CCCCCCchhhhhHHHHHHHHHccCCCC
Q 045022 14 TTWCIVKPS-TGDERLIANIQYCCDHVDCSIIQPGGA-----CYEPNNNYSHASVVMHLFYRANNKLPH 76 (77)
Q Consensus 14 ~~wCVak~~-~~~~~l~~~ld~aC~~~dC~~I~~gg~-----C~~p~t~~~haSyAfN~Yyq~~~~~~~ 76 (77)
++|||+|++ +++++||++||||||++||++|++||+ ||+||++++|+|||||+|||+++++.+
T Consensus 396 ~~~Cv~~~~~~~~~~l~~~~~yaC~~~dC~~I~~~g~~g~yG~~~~~~~~~~~Sya~n~yyq~~~~~~~ 464 (555)
T 2w61_A 396 ILPCEIVPFGAESGKYEEYFSYLCSKVDCSDILANGKTGEYGEFSDCSVEQKLSLQLSKLYCKIGANDR 464 (555)
T ss_dssp HCSEEECCTTCCGGGHHHHHHHHTTTSCGGGGCEETTTTEECTTTTSCHHHHHHHHHHHHHHHHCCCSS
T ss_pred CCeeecCCCCCCHHHHHHHHHHHhCcCCCccccCCCcCCCccccCCCCHHHHHHHHHHHHHHHcCCCCC
Confidence 589999999 999999999999999999999999999 699999999999999999999998865
No 3
>2gsv_A Hypothetical protein YVFG; alpha-helical protein, structural genomics, PSI, protein structure initiative; 1.90A {Bacillus subtilis} SCOP: a.23.7.1 PDB: 2js1_A
Probab=47.04 E-value=7.8 Score=22.90 Aligned_cols=9 Identities=33% Similarity=0.748 Sum_probs=7.3
Q ss_pred HHHHHHHHH
Q 045022 62 VVMHLFYRA 70 (77)
Q Consensus 62 yAfN~Yyq~ 70 (77)
-|||+||..
T Consensus 28 hAmNaYYrs 36 (80)
T 2gsv_A 28 HAMNSYYRS 36 (80)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 379999975
No 4
>2juy_A Neopetrosiamide A; amphipathic, antitumor protein; HET: SME; NMR {Neopetrosia SP}
Probab=21.74 E-value=35 Score=16.20 Aligned_cols=13 Identities=38% Similarity=0.925 Sum_probs=8.9
Q ss_pred hccCccccCccCC
Q 045022 34 YCCDHVDCSIIQP 46 (77)
Q Consensus 34 ~aC~~~dC~~I~~ 46 (77)
|.|..+||.|-.|
T Consensus 5 fgcalvdcgpnrp 17 (28)
T 2juy_A 5 FGCALVDCGPNRP 17 (28)
T ss_dssp SSSTTTTSCTTSC
T ss_pred ccceEeecCCCCc
Confidence 4577789976543
No 5
>1b9g_A Protein (growth factor IGF-1); NMR {Homo sapiens} SCOP: g.1.1.1
Probab=18.53 E-value=1e+02 Score=16.97 Aligned_cols=36 Identities=14% Similarity=0.370 Sum_probs=22.8
Q ss_pred HHHHHHHHhccCccccCccCCCCc----CCCCCCchhhhhH
Q 045022 26 ERLIANIQYCCDHVDCSIIQPGGA----CYEPNNNYSHASV 62 (77)
Q Consensus 26 ~~l~~~ld~aC~~~dC~~I~~gg~----C~~p~t~~~haSy 62 (77)
+.|.++|.++|+.--= -....|. |+.++|+..-.+|
T Consensus 8 ~~L~~aL~~vC~~rgf-~~~k~GIvdECC~~~Ct~~~L~~Y 47 (57)
T 1b9g_A 8 AELVDALQFVCGDRGF-YFNKPGIVDECCFRSCDLRRLEMY 47 (57)
T ss_dssp TTHHHHHHTTCSSSSC-CTTCCSHHHHHTTSSCCSSSGGGT
T ss_pred HHHHHHHHHHHcCCCc-cCCCCCcHhhhcCCCCCHHHHHHh
Confidence 5688999999996100 0112233 8888887766555
No 6
>2wfu_B Probable insulin-like peptide 5 B chain; cleavage on PAIR of basic residues, signaling protein; 1.85A {Drosophila melanogaster} PDB: 2wfv_B
Probab=15.75 E-value=82 Score=14.74 Aligned_cols=14 Identities=14% Similarity=0.446 Sum_probs=11.4
Q ss_pred hHHHHHHHHhccCc
Q 045022 25 DERLIANIQYCCDH 38 (77)
Q Consensus 25 ~~~l~~~ld~aC~~ 38 (77)
.++|.++|..+|+.
T Consensus 7 G~~L~eaL~~vC~~ 20 (26)
T 2wfu_B 7 GPALMDMLRVACPN 20 (26)
T ss_dssp HHHHHHHHHHHCSS
T ss_pred hHHHHHHHHHHHhc
Confidence 36788999999974
No 7
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=14.87 E-value=62 Score=15.81 Aligned_cols=14 Identities=14% Similarity=0.496 Sum_probs=11.6
Q ss_pred hHHHHHHHHhccCc
Q 045022 25 DERLIANIQYCCDH 38 (77)
Q Consensus 25 ~~~l~~~ld~aC~~ 38 (77)
-+.|.++|-++|+.
T Consensus 8 Gs~LVdaL~~vCgd 21 (30)
T 1m5a_B 8 GSHLVEALYLVCGE 21 (30)
T ss_dssp THHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHhcc
Confidence 36789999999985
No 8
>1pq1_B BCL2-like protein 11; BCL-XL/BIM, apoptosis; 1.65A {Mus musculus}
Probab=14.41 E-value=59 Score=16.16 Aligned_cols=9 Identities=11% Similarity=0.121 Sum_probs=6.3
Q ss_pred HHHHHHHHc
Q 045022 63 VMHLFYRAN 71 (77)
Q Consensus 63 AfN~Yyq~~ 71 (77)
-||.||-..
T Consensus 18 eFNa~ypRR 26 (33)
T 1pq1_B 18 EFNETYTRR 26 (33)
T ss_dssp HHHHHHHHH
T ss_pred HhhcccchH
Confidence 488888653
No 9
>1k8v_A Neuropeptide F; moniezia expansa, NPF, unknown function; NMR {Synthetic} SCOP: j.6.1.1
Probab=11.58 E-value=82 Score=16.36 Aligned_cols=11 Identities=0% Similarity=0.259 Sum_probs=8.4
Q ss_pred HHHHHHHHccC
Q 045022 63 VMHLFYRANNK 73 (77)
Q Consensus 63 AfN~Yyq~~~~ 73 (77)
.+|.||+..+|
T Consensus 26 ~LneYyai~GR 36 (40)
T 1k8v_A 26 QINEYFAIIGR 36 (40)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhcC
Confidence 47889887765
No 10
>4fp4_A Polyprenyl synthetase; isoprenoid synthesis, isoprenoid diphosphate synthase, trans; HET: GER UNL; 2.00A {Pyrobaculum calidifontis}
Probab=10.75 E-value=55 Score=23.18 Aligned_cols=18 Identities=11% Similarity=0.425 Sum_probs=0.0
Q ss_pred CchhhhhHHHHHHHHHccC
Q 045022 55 NNYSHASVVMHLFYRANNK 73 (77)
Q Consensus 55 t~~~haSyAfN~Yyq~~~~ 73 (77)
+..++ |||=|.|||.+-.
T Consensus 257 ~~~~~-~~~~~~~~~~~~~ 274 (285)
T 4fp4_A 257 LTVSR-TIAENLYFQSHHH 274 (285)
T ss_dssp -------------------
T ss_pred chHHH-HHHHHHhhhhccc
Confidence 44555 9999999998744
Done!