Query 045022
Match_columns 77
No_of_seqs 142 out of 662
Neff 5.7
Searched_HMMs 13730
Date Mon Mar 25 15:51:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045022.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045022hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2gsva1 a.23.7.1 (A:3-69) Hypo 52.4 2.7 0.0002 22.8 1.3 9 62-70 26-34 (67)
2 d1i26a_ g.3.6.3 (A:) PTU-1 {As 29.5 13 0.00097 17.2 1.5 11 44-54 6-16 (34)
3 d1ijda_ f.3.1.1 (A:) Light-har 20.9 2.9 0.00021 21.4 -2.1 15 12-26 3-17 (46)
4 d1nkza_ f.3.1.1 (A:) Light-har 18.7 4.6 0.00033 21.1 -1.7 15 12-26 3-17 (53)
5 d1lr7a1 g.3.11.3 (A:64-88) Dom 17.4 19 0.0014 15.8 0.6 9 35-43 2-10 (26)
6 d1tf3a1 g.37.1.1 (A:1-40) Tran 16.6 19 0.0014 16.6 0.5 12 33-44 3-14 (31)
7 d1iq0a1 a.27.1.1 (A:467-592) A 15.5 22 0.0016 20.3 0.7 15 57-71 66-80 (126)
8 d2v5pc1 g.1.1.1 (C:6-63) Insul 13.4 44 0.0032 17.3 1.5 13 26-38 6-18 (58)
9 d1wqji1 g.1.1.1 (I:2-63) Insul 12.2 36 0.0026 17.9 1.0 14 25-38 6-19 (62)
10 d1w1oa2 d.145.1.1 (A:40-245) C 10.9 80 0.0058 18.8 2.5 20 15-35 30-49 (206)
No 1
>d2gsva1 a.23.7.1 (A:3-69) Hypothetical protein YvfG {Bacillus subtilis [TaxId: 1423]}
Probab=52.40 E-value=2.7 Score=22.84 Aligned_cols=9 Identities=33% Similarity=0.748 Sum_probs=7.3
Q ss_pred HHHHHHHHH
Q 045022 62 VVMHLFYRA 70 (77)
Q Consensus 62 yAfN~Yyq~ 70 (77)
-|||+||..
T Consensus 26 hAmNaYYrs 34 (67)
T d2gsva1 26 HAMNSYYRS 34 (67)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 379999975
No 2
>d1i26a_ g.3.6.3 (A:) PTU-1 {Assassin bug (Peirates turpis) [TaxId: 181095]}
Probab=29.48 E-value=13 Score=17.24 Aligned_cols=11 Identities=36% Similarity=1.117 Sum_probs=9.1
Q ss_pred cCCCCcCCCCC
Q 045022 44 IQPGGACYEPN 54 (77)
Q Consensus 44 I~~gg~C~~p~ 54 (77)
|.||.+||.-+
T Consensus 6 iapgapcfgtd 16 (34)
T d1i26a_ 6 IAPGAPCFGTD 16 (34)
T ss_dssp BCTTSCCTTTT
T ss_pred cCCCCCccCCC
Confidence 78999999863
No 3
>d1ijda_ f.3.1.1 (A:) Light-harvesting complex subunits {Rhodoblastus acidophilus [TaxId: 1074]}
Probab=20.88 E-value=2.9 Score=21.38 Aligned_cols=15 Identities=27% Similarity=0.572 Sum_probs=11.3
Q ss_pred CCceeEEeCCCCChH
Q 045022 12 GQTTWCIVKPSTGDE 26 (77)
Q Consensus 12 ~~~~wCVak~~~~~~ 26 (77)
.++.|+|+||.+..-
T Consensus 3 ~gkiW~VV~PtvG~P 17 (46)
T d1ijda_ 3 QGKIWTVVPPAFGLP 17 (46)
T ss_dssp TGGGGGTSCHHHHHH
T ss_pred CceEEEEECCCcCch
Confidence 467899999987443
No 4
>d1nkza_ f.3.1.1 (A:) Light-harvesting complex subunits {Purple bacterium (Rhodoblastus acidophilus) [TaxId: 1074]}
Probab=18.73 E-value=4.6 Score=21.15 Aligned_cols=15 Identities=27% Similarity=0.643 Sum_probs=11.3
Q ss_pred CCceeEEeCCCCChH
Q 045022 12 GQTTWCIVKPSTGDE 26 (77)
Q Consensus 12 ~~~~wCVak~~~~~~ 26 (77)
.++.|+|+||.+..-
T Consensus 3 qgkiW~VV~PtVG~P 17 (53)
T d1nkza_ 3 QGKIWTVVNPAIGIP 17 (53)
T ss_dssp CTTGGGTSCHHHHHH
T ss_pred CceEEEEECCCcCch
Confidence 467899999987443
No 5
>d1lr7a1 g.3.11.3 (A:64-88) Domain of follistatin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=17.44 E-value=19 Score=15.80 Aligned_cols=9 Identities=44% Similarity=1.195 Sum_probs=6.1
Q ss_pred ccCccccCc
Q 045022 35 CCDHVDCSI 43 (77)
Q Consensus 35 aC~~~dC~~ 43 (77)
.|.++||.|
T Consensus 2 tcdnvdcgp 10 (26)
T d1lr7a1 2 TCENVDCGP 10 (26)
T ss_dssp CSTTCCCCT
T ss_pred cccccccCC
Confidence 477788864
No 6
>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}
Probab=16.60 E-value=19 Score=16.58 Aligned_cols=12 Identities=33% Similarity=0.977 Sum_probs=9.0
Q ss_pred HhccCccccCcc
Q 045022 33 QYCCDHVDCSII 44 (77)
Q Consensus 33 d~aC~~~dC~~I 44 (77)
.|+|+-.||++-
T Consensus 3 ~~iCsf~dC~A~ 14 (31)
T d1tf3a1 3 RYICSFADCGAA 14 (31)
T ss_dssp CEECSSGGGCCE
T ss_pred ceEeeCCCcchh
Confidence 378888888753
No 7
>d1iq0a1 a.27.1.1 (A:467-592) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]}
Probab=15.54 E-value=22 Score=20.27 Aligned_cols=15 Identities=13% Similarity=0.273 Sum_probs=10.9
Q ss_pred hhhhhHHHHHHHHHc
Q 045022 57 YSHASVVMHLFYRAN 71 (77)
Q Consensus 57 ~~haSyAfN~Yyq~~ 71 (77)
...++=+||+||+..
T Consensus 66 l~~La~~F~~fY~~~ 80 (126)
T d1iq0a1 66 LLDLAASWNAYYNAR 80 (126)
T ss_dssp HHHHHHHHHHHHHCE
T ss_pred HHHHHHHHHHHHHhc
Confidence 345667899999854
No 8
>d2v5pc1 g.1.1.1 (C:6-63) Insulin-like growth factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.36 E-value=44 Score=17.33 Aligned_cols=13 Identities=23% Similarity=0.756 Sum_probs=11.7
Q ss_pred HHHHHHHHhccCc
Q 045022 26 ERLIANIQYCCDH 38 (77)
Q Consensus 26 ~~l~~~ld~aC~~ 38 (77)
+.|.++|-++||.
T Consensus 6 s~LVdaL~~VCg~ 18 (58)
T d2v5pc1 6 GELVDTLQFVCGD 18 (58)
T ss_dssp HHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHcC
Confidence 5799999999996
No 9
>d1wqji1 g.1.1.1 (I:2-63) Insulin-like growth factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.23 E-value=36 Score=17.86 Aligned_cols=14 Identities=21% Similarity=0.705 Sum_probs=12.1
Q ss_pred hHHHHHHHHhccCc
Q 045022 25 DERLIANIQYCCDH 38 (77)
Q Consensus 25 ~~~l~~~ld~aC~~ 38 (77)
-+.|.++|-++||.
T Consensus 6 Gs~LvdaL~~VCG~ 19 (62)
T d1wqji1 6 GAELVDALQFVCGD 19 (62)
T ss_dssp HHHHHHHHHHHHGG
T ss_pred hHHHHHHHHHHHcc
Confidence 36799999999996
No 10
>d1w1oa2 d.145.1.1 (A:40-245) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]}
Probab=10.90 E-value=80 Score=18.84 Aligned_cols=20 Identities=20% Similarity=0.280 Sum_probs=16.8
Q ss_pred eeEEeCCCCChHHHHHHHHhc
Q 045022 15 TWCIVKPSTGDERLIANIQYC 35 (77)
Q Consensus 15 ~wCVak~~~~~~~l~~~ld~a 35 (77)
-.||++|. +.+++++.+.||
T Consensus 30 P~~Vv~P~-s~~ev~~iv~~a 49 (206)
T d1w1oa2 30 PAAVLYPS-STGDLVALLSAA 49 (206)
T ss_dssp CSEEECCS-SHHHHHHHHHHH
T ss_pred CCEEEEcC-CHHHHHHHHHHH
Confidence 36899988 788999999886
Done!