Query 045029
Match_columns 485
No_of_seqs 187 out of 1311
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 16:03:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045029.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045029hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 4.8E-74 1.6E-78 572.9 39.9 430 3-482 13-454 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 2.3E-67 8E-72 533.7 44.5 452 3-482 6-469 (480)
3 2c1x_A UDP-glucose flavonoid 3 100.0 1.4E-66 4.9E-71 524.6 38.5 433 2-482 6-452 (456)
4 2acv_A Triterpene UDP-glucosyl 100.0 1E-65 3.4E-70 519.8 39.9 442 2-481 8-462 (463)
5 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 2.2E-65 7.4E-70 521.1 38.2 443 1-482 6-479 (482)
6 2iya_A OLEI, oleandomycin glyc 100.0 4.1E-44 1.4E-48 360.0 31.3 395 1-483 10-422 (424)
7 4amg_A Snogd; transferase, pol 100.0 3.3E-44 1.1E-48 358.0 22.0 356 2-480 21-398 (400)
8 1iir_A Glycosyltransferase GTF 100.0 6.1E-43 2.1E-47 350.3 24.7 371 4-483 1-401 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 4.4E-42 1.5E-46 344.3 19.5 373 4-483 1-402 (416)
10 3h4t_A Glycosyltransferase GTF 100.0 1.1E-39 3.7E-44 325.2 23.5 345 4-460 1-366 (404)
11 3rsc_A CALG2; TDP, enediyne, s 100.0 1.7E-37 5.8E-42 310.9 31.6 374 3-481 20-412 (415)
12 3ia7_A CALG4; glycosysltransfe 100.0 3.7E-37 1.3E-41 307.1 33.2 376 1-481 2-397 (402)
13 2yjn_A ERYCIII, glycosyltransf 100.0 9.5E-37 3.3E-41 307.8 29.4 372 2-482 19-435 (441)
14 2iyf_A OLED, oleandomycin glyc 100.0 1.9E-36 6.5E-41 304.8 30.7 359 1-462 5-384 (430)
15 2p6p_A Glycosyl transferase; X 100.0 3.9E-36 1.3E-40 298.0 30.7 337 4-462 1-364 (384)
16 4fzr_A SSFS6; structural genom 100.0 8.8E-34 3E-38 282.4 24.5 340 3-461 15-384 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 9.4E-33 3.2E-37 274.9 24.8 349 3-481 20-396 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 4.5E-32 1.5E-36 269.4 25.1 355 3-482 1-388 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 3.5E-29 1.2E-33 250.2 31.2 365 3-482 20-408 (412)
20 2o6l_A UDP-glucuronosyltransfe 100.0 2.3E-28 8E-33 213.1 15.0 165 262-461 5-170 (170)
21 3s2u_A UDP-N-acetylglucosamine 100.0 8.9E-28 3E-32 235.4 19.5 343 1-481 1-355 (365)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 7.8E-18 2.7E-22 164.9 26.1 342 1-484 2-357 (364)
23 2jzc_A UDP-N-acetylglucosamine 99.6 3.5E-15 1.2E-19 133.1 8.1 139 276-441 26-196 (224)
24 3hbm_A UDP-sugar hydrolase; PS 99.3 1.4E-10 4.7E-15 107.8 18.6 114 278-414 157-273 (282)
25 3c48_A Predicted glycosyltrans 99.2 1.7E-08 5.9E-13 100.7 27.3 84 345-449 305-395 (438)
26 3okp_A GDP-mannose-dependent a 99.1 5.8E-08 2E-12 95.3 27.0 322 1-450 2-349 (394)
27 1vgv_A UDP-N-acetylglucosamine 99.1 1.7E-08 5.9E-13 98.9 22.5 83 346-451 263-348 (384)
28 3ot5_A UDP-N-acetylglucosamine 99.0 6.2E-09 2.1E-13 102.7 17.7 108 346-480 282-392 (403)
29 1v4v_A UDP-N-acetylglucosamine 99.0 1.3E-08 4.4E-13 99.5 18.9 85 346-453 255-342 (376)
30 3dzc_A UDP-N-acetylglucosamine 99.0 3.2E-08 1.1E-12 97.3 20.8 102 346-474 288-392 (396)
31 3fro_A GLGA glycogen synthase; 99.0 1.3E-07 4.5E-12 94.1 23.9 79 346-443 311-394 (439)
32 2iuy_A Avigt4, glycosyltransfe 98.9 2.5E-08 8.7E-13 96.1 15.8 127 281-443 164-307 (342)
33 2gek_A Phosphatidylinositol ma 98.9 4.7E-07 1.6E-11 89.2 24.2 88 345-451 262-355 (406)
34 3beo_A UDP-N-acetylglucosamine 98.8 4.4E-07 1.5E-11 88.4 20.8 83 346-451 263-348 (375)
35 2r60_A Glycosyl transferase, g 98.8 1.6E-06 5.3E-11 88.1 24.5 84 345-449 334-428 (499)
36 2jjm_A Glycosyl transferase, g 98.7 1E-05 3.5E-10 79.3 28.4 84 346-450 267-355 (394)
37 2iw1_A Lipopolysaccharide core 98.7 3.3E-05 1.1E-09 74.8 31.2 88 346-453 253-345 (374)
38 2x6q_A Trehalose-synthase TRET 98.7 1.2E-05 4.1E-10 79.4 26.6 83 346-451 293-385 (416)
39 4hwg_A UDP-N-acetylglucosamine 98.6 1.7E-07 5.8E-12 91.6 11.1 156 278-478 203-372 (385)
40 2f9f_A First mannosyl transfer 98.4 1.1E-06 3.8E-11 75.8 8.9 140 280-457 24-175 (177)
41 3s28_A Sucrose synthase 1; gly 98.2 0.00016 5.3E-09 76.9 23.5 77 346-442 640-728 (816)
42 3q3e_A HMW1C-like glycosyltran 97.5 0.0015 5.1E-08 66.4 14.3 142 278-451 440-594 (631)
43 4gyw_A UDP-N-acetylglucosamine 97.5 0.0019 6.3E-08 68.3 15.8 102 278-391 522-629 (723)
44 2vsy_A XCC0866; transferase, g 97.4 0.0041 1.4E-07 63.9 16.5 88 346-451 434-528 (568)
45 2bfw_A GLGA glycogen synthase; 97.2 0.0049 1.7E-07 53.5 13.1 76 347-443 96-179 (200)
46 3qhp_A Type 1 capsular polysac 97.2 0.0016 5.5E-08 54.8 9.5 132 279-450 2-145 (166)
47 3rhz_A GTF3, nucleotide sugar 97.1 0.00097 3.3E-08 63.6 8.0 109 347-480 215-337 (339)
48 2xci_A KDO-transferase, 3-deox 97.0 0.0034 1.2E-07 60.8 11.0 92 348-458 262-362 (374)
49 3oy2_A Glycosyltransferase B73 96.9 0.009 3.1E-07 58.4 12.6 83 348-451 256-361 (413)
50 3tov_A Glycosyl transferase fa 96.8 0.075 2.6E-06 50.7 18.6 107 2-139 7-115 (349)
51 1psw_A ADP-heptose LPS heptosy 96.2 0.47 1.6E-05 44.8 20.0 105 4-140 1-107 (348)
52 1rzu_A Glycogen synthase 1; gl 96.2 0.032 1.1E-06 55.8 11.9 85 346-451 346-449 (485)
53 2qzs_A Glycogen synthase; glyc 96.2 0.054 1.8E-06 54.1 13.5 85 346-451 347-450 (485)
54 2x0d_A WSAF; GT4 family, trans 95.6 0.011 3.9E-07 57.9 5.6 86 346-451 295-385 (413)
55 2hy7_A Glucuronosyltransferase 91.8 0.13 4.5E-06 50.1 4.5 77 346-447 265-354 (406)
56 3vue_A GBSS-I, granule-bound s 87.6 1.2 4E-05 45.1 7.7 90 344-443 380-476 (536)
57 3nb0_A Glycogen [starch] synth 80.0 5 0.00017 41.3 8.4 50 345-394 489-552 (725)
58 3t5t_A Putative glycosyltransf 73.6 14 0.00048 36.6 9.4 109 347-482 353-472 (496)
59 1uqt_A Alpha, alpha-trehalose- 71.9 16 0.00055 36.1 9.5 104 351-482 337-453 (482)
60 3vue_A GBSS-I, granule-bound s 63.6 3.7 0.00013 41.4 3.0 37 3-43 9-53 (536)
61 1ccw_A Protein (glutamate muta 63.6 9 0.00031 30.5 4.7 38 1-40 1-38 (137)
62 3qjg_A Epidermin biosynthesis 61.1 9.7 0.00033 31.8 4.6 38 1-42 4-41 (175)
63 3zqu_A Probable aromatic acid 60.9 11 0.00039 32.4 5.1 38 2-42 3-40 (209)
64 1id1_A Putative potassium chan 59.5 7 0.00024 31.6 3.5 34 1-41 1-34 (153)
65 2gt1_A Lipopolysaccharide hept 58.5 14 0.00048 34.0 5.9 39 4-42 1-39 (326)
66 2x0d_A WSAF; GT4 family, trans 58.3 4.6 0.00016 39.1 2.5 38 3-42 46-88 (413)
67 2hy7_A Glucuronosyltransferase 57.8 37 0.0013 32.4 8.9 35 3-41 14-51 (406)
68 3tl4_X Glutaminyl-tRNA synthet 53.9 19 0.00065 30.3 5.2 52 428-480 116-177 (187)
69 2wqk_A 5'-nucleotidase SURE; S 52.7 40 0.0014 29.9 7.4 35 5-43 3-37 (251)
70 3dm5_A SRP54, signal recogniti 52.3 96 0.0033 30.0 10.7 37 4-42 101-137 (443)
71 1q1v_A DEK protein; winged-hel 51.9 30 0.001 23.8 5.1 54 428-481 11-66 (70)
72 2iz6_A Molybdenum cofactor car 50.0 92 0.0032 25.8 8.9 44 350-393 93-140 (176)
73 4e5s_A MCCFLIKE protein (BA_56 49.7 21 0.00073 33.2 5.4 73 292-393 63-137 (331)
74 1rzu_A Glycogen synthase 1; gl 49.7 13 0.00043 36.5 4.2 37 4-42 1-43 (485)
75 2qzs_A Glycogen synthase; glyc 48.6 14 0.00047 36.2 4.2 37 4-42 1-43 (485)
76 1mvl_A PPC decarboxylase athal 47.9 20 0.00069 30.8 4.6 37 2-42 18-54 (209)
77 3sju_A Keto reductase; short-c 47.2 90 0.0031 27.8 9.3 34 1-39 21-54 (279)
78 2h31_A Multifunctional protein 46.7 1E+02 0.0036 29.5 9.7 138 278-463 265-413 (425)
79 1g63_A Epidermin modifying enz 46.6 21 0.00071 29.9 4.4 38 1-42 1-38 (181)
80 2ixd_A LMBE-related protein; h 46.0 1E+02 0.0035 26.9 9.1 39 1-40 1-40 (242)
81 1pfk_A Phosphofructokinase; tr 45.0 97 0.0033 28.5 9.0 71 360-442 159-239 (320)
82 2l82_A Designed protein OR32; 44.1 48 0.0017 24.6 5.4 35 279-317 2-36 (162)
83 3trh_A Phosphoribosylaminoimid 43.9 1.3E+02 0.0045 24.6 9.0 143 279-463 7-158 (169)
84 1p3y_1 MRSD protein; flavoprot 43.7 14 0.00049 31.4 2.9 38 2-42 7-44 (194)
85 1sbz_A Probable aromatic acid 42.1 30 0.001 29.4 4.7 35 5-42 2-37 (197)
86 3lqk_A Dipicolinate synthase s 41.7 23 0.00078 30.3 3.9 38 2-42 6-44 (201)
87 4h1h_A LMO1638 protein; MCCF-l 41.3 31 0.0011 31.9 5.2 72 292-392 63-136 (327)
88 1xmp_A PURE, phosphoribosylami 39.8 1.6E+02 0.0053 24.2 11.5 145 279-465 12-165 (170)
89 3mcu_A Dipicolinate synthase, 39.8 25 0.00085 30.2 3.9 38 2-42 4-42 (207)
90 1zl0_A Hypothetical protein PA 39.6 41 0.0014 30.9 5.5 75 290-393 63-139 (311)
91 3vot_A L-amino acid ligase, BL 39.0 1.9E+02 0.0065 27.5 10.7 26 112-137 74-101 (425)
92 3rg8_A Phosphoribosylaminoimid 38.7 1.6E+02 0.0053 23.9 10.2 141 280-463 4-150 (159)
93 1qzu_A Hypothetical protein MD 38.7 24 0.0008 30.3 3.6 38 2-42 18-56 (206)
94 2ejb_A Probable aromatic acid 38.4 52 0.0018 27.7 5.6 43 5-55 3-45 (189)
95 3to5_A CHEY homolog; alpha(5)b 38.2 40 0.0014 26.4 4.7 31 113-143 57-96 (134)
96 3fgn_A Dethiobiotin synthetase 38.1 2.1E+02 0.0071 25.1 12.1 27 12-40 36-62 (251)
97 4egb_A DTDP-glucose 4,6-dehydr 38.1 2.3E+02 0.0079 25.7 11.0 34 3-40 24-57 (346)
98 4dzz_A Plasmid partitioning pr 37.9 1.7E+02 0.0058 24.1 9.2 35 6-42 4-39 (206)
99 2q5c_A NTRC family transcripti 37.8 49 0.0017 28.0 5.5 43 95-145 129-171 (196)
100 3sr3_A Microcin immunity prote 36.6 40 0.0014 31.4 5.1 73 292-393 64-138 (336)
101 3sz8_A 2-dehydro-3-deoxyphosph 36.0 2.4E+02 0.0081 25.4 9.8 29 284-316 115-143 (285)
102 1e2b_A Enzyme IIB-cellobiose; 33.8 1E+02 0.0036 22.9 6.1 36 1-36 1-36 (106)
103 4e3z_A Putative oxidoreductase 33.5 2.4E+02 0.0081 24.7 9.8 31 1-34 23-53 (272)
104 3gpi_A NAD-dependent epimerase 33.2 50 0.0017 29.4 5.1 33 1-40 1-33 (286)
105 4dik_A Flavoprotein; TM0755, e 33.1 31 0.001 33.2 3.8 47 266-312 253-299 (410)
106 3s2u_A UDP-N-acetylglucosamine 33.1 79 0.0027 29.5 6.7 36 279-316 4-39 (365)
107 4ds3_A Phosphoribosylglycinami 32.7 2.3E+02 0.0079 24.1 9.4 112 1-143 5-117 (209)
108 3oid_A Enoyl-[acyl-carrier-pro 31.0 2.6E+02 0.009 24.2 10.6 32 1-35 1-32 (258)
109 2lpm_A Two-component response 30.8 39 0.0013 26.1 3.4 40 96-140 41-85 (123)
110 2yxb_A Coenzyme B12-dependent 30.6 2.1E+02 0.0072 23.0 11.4 36 3-40 18-53 (161)
111 3ksu_A 3-oxoacyl-acyl carrier 30.3 2.4E+02 0.0081 24.6 9.1 30 5-39 12-41 (262)
112 2hy6_A General control protein 30.3 45 0.0016 18.9 2.5 29 432-460 4-32 (34)
113 1kd8_B GABH BLL, GCN4 acid bas 30.2 64 0.0022 18.6 3.2 31 432-462 4-34 (36)
114 2d1p_B TUSC, hypothetical UPF0 30.1 79 0.0027 24.0 5.1 35 1-36 1-37 (119)
115 3tfo_A Putative 3-oxoacyl-(acy 29.9 2.1E+02 0.0072 25.1 8.7 35 1-40 1-35 (264)
116 3u9l_A 3-oxoacyl-[acyl-carrier 29.7 2E+02 0.0069 26.2 8.8 28 5-35 6-33 (324)
117 3gl9_A Response regulator; bet 29.7 80 0.0027 23.5 5.1 32 112-143 45-85 (122)
118 3u7q_A Nitrogenase molybdenum- 29.4 1.7E+02 0.0058 28.7 8.5 24 113-139 417-440 (492)
119 3bgw_A DNAB-like replicative h 28.8 1.7E+02 0.0059 28.2 8.4 39 5-45 199-237 (444)
120 2x5n_A SPRPN10, 26S proteasome 28.6 1.7E+02 0.0058 24.4 7.4 63 6-73 110-173 (192)
121 3tla_A MCCF; serine protease, 28.6 48 0.0016 31.4 4.1 74 291-393 93-168 (371)
122 2oxj_A Hybrid alpha/beta pepti 28.5 57 0.002 18.5 2.7 28 432-459 4-31 (34)
123 2r8r_A Sensor protein; KDPD, P 28.4 65 0.0022 28.0 4.7 33 3-35 6-38 (228)
124 1g5t_A COB(I)alamin adenosyltr 28.1 2.7E+02 0.0092 23.4 12.3 36 3-40 28-63 (196)
125 3ucx_A Short chain dehydrogena 27.8 2.8E+02 0.0094 24.1 9.1 30 5-39 12-41 (264)
126 2xxa_A Signal recognition part 27.8 2.6E+02 0.0088 26.9 9.4 36 5-42 102-138 (433)
127 1y80_A Predicted cobalamin bin 27.5 58 0.002 27.7 4.3 37 3-41 88-124 (210)
128 4fn4_A Short chain dehydrogena 27.3 2.8E+02 0.0097 24.2 8.9 29 3-34 6-34 (254)
129 3lyl_A 3-oxoacyl-(acyl-carrier 27.3 2.8E+02 0.0095 23.6 9.0 32 4-40 5-36 (247)
130 1u11_A PURE (N5-carboxyaminoim 27.2 2.7E+02 0.0091 23.1 11.3 145 279-466 22-176 (182)
131 2pju_A Propionate catabolism o 27.1 1.1E+02 0.0037 26.5 5.9 29 363-394 64-92 (225)
132 1qkk_A DCTD, C4-dicarboxylate 26.8 1.6E+02 0.0054 22.8 6.7 62 383-459 74-135 (155)
133 2i2x_B MTAC, methyltransferase 26.8 78 0.0027 28.0 5.1 38 3-42 123-160 (258)
134 2q5c_A NTRC family transcripti 26.8 78 0.0027 26.7 4.9 31 363-394 50-80 (196)
135 4b4k_A N5-carboxyaminoimidazol 26.7 2.7E+02 0.0093 23.0 10.4 148 278-465 22-176 (181)
136 1u0t_A Inorganic polyphosphate 26.4 73 0.0025 29.1 5.0 32 359-392 72-107 (307)
137 3osu_A 3-oxoacyl-[acyl-carrier 26.0 3.1E+02 0.011 23.4 10.4 32 1-35 1-32 (246)
138 3nxa_A Protein S100-A16; S100 25.9 53 0.0018 24.1 3.2 53 427-480 29-81 (100)
139 1tjn_A Sirohydrochlorin cobalt 25.7 79 0.0027 25.4 4.5 35 279-313 26-62 (156)
140 3c3g_A Alpha/beta peptide with 25.3 71 0.0024 18.0 2.7 28 432-459 3-30 (33)
141 1jx7_A Hypothetical protein YC 25.3 49 0.0017 24.8 3.1 36 1-36 1-39 (117)
142 2lnd_A De novo designed protei 25.1 1.1E+02 0.0037 21.3 4.3 49 382-443 49-100 (112)
143 3i6i_A Putative leucoanthocyan 24.8 3.9E+02 0.013 24.2 12.3 34 1-40 8-41 (346)
144 3imf_A Short chain dehydrogena 24.7 3.4E+02 0.011 23.4 9.4 30 5-39 7-36 (257)
145 3m1a_A Putative dehydrogenase; 24.7 3.3E+02 0.011 23.8 9.1 28 4-34 5-32 (281)
146 3ia7_A CALG4; glycosysltransfe 24.6 1.2E+02 0.0041 28.2 6.4 34 280-315 7-40 (402)
147 3v8b_A Putative dehydrogenase, 24.5 3.5E+02 0.012 23.8 9.3 31 5-40 29-59 (283)
148 1wma_A Carbonyl reductase [NAD 24.4 2.8E+02 0.0096 23.9 8.6 34 2-40 2-36 (276)
149 3gem_A Short chain dehydrogena 24.3 2.1E+02 0.0072 24.9 7.6 31 5-40 28-58 (260)
150 1ydn_A Hydroxymethylglutaryl-C 24.3 3.7E+02 0.013 24.0 9.4 26 290-315 22-47 (295)
151 1bg6_A N-(1-D-carboxylethyl)-L 24.3 46 0.0016 30.9 3.3 33 1-40 2-34 (359)
152 2pju_A Propionate catabolism o 24.2 77 0.0026 27.5 4.4 39 96-142 142-180 (225)
153 1j8m_F SRP54, signal recogniti 24.2 3.9E+02 0.013 23.9 9.5 36 5-42 100-135 (297)
154 3ghy_A Ketopantoate reductase 23.9 50 0.0017 30.5 3.4 33 1-40 1-33 (335)
155 1f9y_A HPPK, protein (6-hydrox 23.7 92 0.0032 25.3 4.4 32 280-311 2-34 (158)
156 3qiv_A Short-chain dehydrogena 23.7 3.2E+02 0.011 23.4 8.7 31 5-40 10-40 (253)
157 1wrd_A TOM1, target of MYB pro 23.6 1.3E+02 0.0045 22.3 5.0 37 428-469 2-38 (103)
158 2qx0_A 7,8-dihydro-6-hydroxyme 23.6 1.2E+02 0.0042 24.5 5.2 28 280-307 3-30 (159)
159 2yvq_A Carbamoyl-phosphate syn 23.5 1.7E+02 0.0059 23.0 6.1 44 268-316 12-58 (143)
160 4hn9_A Iron complex transport 23.3 68 0.0023 29.5 4.2 29 113-141 116-144 (335)
161 1o4v_A Phosphoribosylaminoimid 23.0 3.2E+02 0.011 22.6 11.9 142 279-465 14-165 (183)
162 3mc3_A DSRE/DSRF-like family p 22.8 99 0.0034 24.1 4.5 23 13-35 28-50 (134)
163 4dmm_A 3-oxoacyl-[acyl-carrier 22.5 3.8E+02 0.013 23.3 9.3 29 4-35 28-56 (269)
164 3kl4_A SRP54, signal recogniti 22.3 3.8E+02 0.013 25.7 9.3 36 5-42 99-134 (433)
165 3c3f_A Alpha/beta peptide with 22.3 87 0.003 17.8 2.7 28 432-459 4-31 (34)
166 2xws_A Sirohydrochlorin cobalt 22.2 72 0.0025 24.6 3.6 35 279-313 5-41 (133)
167 3rkr_A Short chain oxidoreduct 22.0 3.2E+02 0.011 23.6 8.4 31 5-40 30-60 (262)
168 1hdo_A Biliverdin IX beta redu 22.0 93 0.0032 25.7 4.5 34 1-40 1-34 (206)
169 3qbc_A 2-amino-4-hydroxy-6-hyd 22.0 1.1E+02 0.0038 24.9 4.6 33 279-311 5-38 (161)
170 2r85_A PURP protein PF1517; AT 22.0 79 0.0027 28.8 4.4 32 2-41 1-32 (334)
171 3ip0_A 2-amino-4-hydroxy-6-hyd 21.9 1.1E+02 0.0036 24.9 4.5 27 280-306 2-28 (158)
172 3t6k_A Response regulator rece 21.8 1.2E+02 0.0043 22.9 5.0 32 113-144 48-88 (136)
173 3h7a_A Short chain dehydrogena 21.6 3.6E+02 0.012 23.1 8.6 32 4-40 7-38 (252)
174 3gaf_A 7-alpha-hydroxysteroid 21.5 3.2E+02 0.011 23.6 8.2 31 5-40 13-43 (256)
175 4grd_A N5-CAIR mutase, phospho 21.4 3.4E+02 0.012 22.2 10.9 145 278-464 12-165 (173)
176 1o60_A 2-dehydro-3-deoxyphosph 21.1 3.7E+02 0.013 24.2 8.4 29 285-317 114-142 (292)
177 2bni_A General control protein 21.0 62 0.0021 18.4 1.9 28 432-459 4-31 (34)
178 3md9_A Hemin-binding periplasm 20.7 90 0.0031 27.2 4.3 29 113-141 59-89 (255)
179 3fs2_A 2-dehydro-3-deoxyphosph 20.7 4.7E+02 0.016 23.6 8.9 29 284-316 136-164 (298)
180 3zzm_A Bifunctional purine bio 20.6 1.2E+02 0.004 29.9 5.1 95 4-122 10-111 (523)
181 3u7q_B Nitrogenase molybdenum- 20.6 5.2E+02 0.018 25.4 10.2 31 4-41 365-395 (523)
182 1lss_A TRK system potassium up 20.4 82 0.0028 24.0 3.6 32 2-40 3-34 (140)
183 3hyw_A Sulfide-quinone reducta 20.3 61 0.0021 31.1 3.3 36 1-42 1-36 (430)
184 4fu0_A D-alanine--D-alanine li 20.2 49 0.0017 31.0 2.5 35 1-35 1-39 (357)
185 2qs7_A Uncharacterized protein 20.1 1.2E+02 0.004 24.1 4.4 35 5-41 10-44 (144)
186 3m6m_D Sensory/regulatory prot 20.0 1E+02 0.0036 23.6 4.2 31 113-143 58-99 (143)
187 1cbk_A Protein (7,8-dihydro-6- 20.0 1.2E+02 0.0041 24.6 4.4 28 280-307 3-30 (160)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=4.8e-74 Score=572.92 Aligned_cols=430 Identities=23% Similarity=0.419 Sum_probs=353.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcCCCCCchhhhhhhhhhcc--CCCCCeEEEECCCCCCCCCCC
Q 045029 3 KAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMKLPHDNTVATYTQSLAAS--NLSSRIKFINLPDDQPDKEST 80 (485)
Q Consensus 3 ~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~f~~l~~~~~~~~~~ 80 (485)
+.||+++|+|++||++|+++||+.|++||+.++|||++|+ ....++... ....+|+|+.++++. |++.+
T Consensus 13 ~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~--------~~~~~~~~~~~~~~~~i~~~~ipdgl-p~~~~ 83 (454)
T 3hbf_A 13 LLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTT--------TTNDTLFSRSNEFLPNIKYYNVHDGL-PKGYV 83 (454)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECH--------HHHHHSCSSSSCCCTTEEEEECCCCC-CTTCC
T ss_pred CCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCH--------HHHHhhhcccccCCCCceEEecCCCC-CCCcc
Confidence 6799999999999999999999999999966669999986 233333211 113579999999764 44433
Q ss_pred ---ChHhHHHHHHHhhhhhHHHHHHhhhhcCCCCCCccEEEECCCchhHHHHHHHcCCCeEEEechhHHHHHHHHHHhhh
Q 045029 81 ---PPKRFFGHFVESKKPHVKEVVANLTDESPDSPRLAGFVLDMFCTCMIEVADEFKVPSYLFFTSGAAFLGFMLRVQAL 157 (485)
Q Consensus 81 ---~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 157 (485)
+....+..+.+.+...+++.++++.++ ...++||||+|.+++|+..+|+++|||++.||+++++.++.+++++..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~ 161 (454)
T 3hbf_A 84 SSGNPREPIFLFIKAMQENFKHVIDEAVAE--TGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLI 161 (454)
T ss_dssp CCSCTTHHHHHHHHHHHHHHHHHHHHHHHH--HCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHH
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHH
Confidence 333445566666666777888776543 235899999999999999999999999999999999999888887665
Q ss_pred hccccccccccCCCCCc-cccCCCCCCCCCCCCCcccc-Cc--cHHHHHHHHHHhhcCCceEEEcChhhhhHHHHHHhhC
Q 045029 158 HDEENTTITELKDSDAV-LEVPGLVNSVPAKVWPSVVF-NK--EWAEVLNQQARTFRGTKGIMVNTFEELESHAVRSFSD 233 (485)
Q Consensus 158 ~~~~~~~~~~~~~~~~~-~~~P~~~~~~~~~~l~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~ 233 (485)
....+.. ....+.. .++||++ .++.++++..+. +. ..+..+.++.+...++.++++||+++||++++..+++
T Consensus 162 ~~~~~~~---~~~~~~~~~~iPg~p-~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~ 237 (454)
T 3hbf_A 162 REKTGSK---EVHDVKSIDVLPGFP-ELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNS 237 (454)
T ss_dssp HHTCCHH---HHTTSSCBCCSTTSC-CBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHT
T ss_pred HhhcCCC---ccccccccccCCCCC-CcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHh
Confidence 4331110 0011222 3589996 688888888765 22 2356667777888899999999999999999988887
Q ss_pred CCCCCCCeEEeccccCCCCCCCCCCCCCCCChhhHhhhhccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhcCCceEEE
Q 045029 234 GKSKTPPLYPMGPILNIKGENYDLGEGGADKKADIMAWLDDQPESSVVFLCFGSWGSFGEDQVKEIACALEQSGHRFLWS 313 (485)
Q Consensus 234 ~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vyvs~GS~~~~~~~~~~~~~~al~~~~~~~l~~ 313 (485)
..|++++|||++...... ....+++|.+||+.++++++|||||||+...+.+++.+++.+|++++++|||+
T Consensus 238 ---~~~~v~~vGPl~~~~~~~------~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~ 308 (454)
T 3hbf_A 238 ---KFKLLLNVGPFNLTTPQR------KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWS 308 (454)
T ss_dssp ---TSSCEEECCCHHHHSCCS------CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEE
T ss_pred ---cCCCEEEECCcccccccc------cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEE
Confidence 557899999997643311 12346789999999888899999999999889999999999999999999999
Q ss_pred EcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchhhhhccCCccccccccCchhhHHHHhhCCcEeecccc
Q 045029 314 LRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQIAVLAHPAIGGFVSHCGWNSTLESIWFGVPIATWPMY 393 (485)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~vL~h~~~~~~itHgG~~s~~eal~~GvP~v~~P~~ 393 (485)
++... ...+|++|.++.++|+++++|+||.+||+|+++++|||||||||++||+++|||+|++|++
T Consensus 309 ~~~~~--------------~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~ 374 (454)
T 3hbf_A 309 FRGDP--------------KEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFF 374 (454)
T ss_dssp CCSCH--------------HHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS
T ss_pred eCCcc--------------hhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCccc
Confidence 98752 2358899999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHhhceeEEeeecccccccccCCcccCHHHHHHHHHHHhcCCh---HHHHHHHHHHHHHHHhhhcCCChH
Q 045029 394 AEQQFNAFELVVELGLAVEIKMDYRNDIMIENPTVVNAEVIERGIRCLMEHNS---EMRKRVKEMSEKARKALSDGGSSF 470 (485)
Q Consensus 394 ~DQ~~na~r~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~---~~r~~a~~~~~~~~~~~~~gg~~~ 470 (485)
+||+.||+++++.||+|+.++.. .+++++|+++|+++|+ ++ +||+||+++++++++++++||||+
T Consensus 375 ~DQ~~Na~~v~~~~g~Gv~l~~~-----------~~~~~~l~~av~~ll~-~~~~~~~r~~a~~l~~~~~~a~~~gGsS~ 442 (454)
T 3hbf_A 375 GDQGLNTILTESVLEIGVGVDNG-----------VLTKESIKKALELTMS-SEKGGIMRQKIVKLKESAFKAVEQNGTSA 442 (454)
T ss_dssp TTHHHHHHHHHTTSCSEEECGGG-----------SCCHHHHHHHHHHHHS-SHHHHHHHHHHHHHHHHHHHHTSTTSHHH
T ss_pred ccHHHHHHHHHHhhCeeEEecCC-----------CCCHHHHHHHHHHHHC-CChHHHHHHHHHHHHHHHHHhhccCCCHH
Confidence 99999999988867999998743 7999999999999998 55 799999999999999999999999
Q ss_pred HHHHHHHHHHhh
Q 045029 471 SSMGRLIDDFLD 482 (485)
Q Consensus 471 ~~~~~~~~~~~~ 482 (485)
.++++||++|.+
T Consensus 443 ~~l~~~v~~i~~ 454 (454)
T 3hbf_A 443 MDFTTLIQIVTS 454 (454)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHHhC
Confidence 999999999863
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=2.3e-67 Score=533.69 Aligned_cols=452 Identities=34% Similarity=0.616 Sum_probs=337.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhC-CCCeEEEEEEcCCCCCchhhhhhhhhhccCCCCCeEEEECCCCCCCCCCC-
Q 045029 3 KAQLVFIPSPGAGHLVSTVEVARLLVDR-DDRLSVTVLIMKLPHDNTVATYTQSLAASNLSSRIKFINLPDDQPDKEST- 80 (485)
Q Consensus 3 ~~~i~~~~~~~~GH~~P~l~La~~L~~r-GH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~~- 80 (485)
++||+++|+|++||++|+++||++|++| ||+ |||++++... ....++.+. .....+++|+.+++...+....
T Consensus 6 ~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~--Vt~~t~~~~~---~~~~~~~~~-~~~~~~i~~~~l~~~~~~~~~~~ 79 (480)
T 2vch_A 6 TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLT--VTFVIAGEGP---PSKAQRTVL-DSLPSSISSVFLPPVDLTDLSSS 79 (480)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCE--EEEEECCSSS---CC-CHHHHH-C-CCTTEEEEECCCCCCTTSCTT
T ss_pred CcEEEEecCcchhHHHHHHHHHHHHHhCCCCE--EEEEECCCcc---hhhhhhhhc-cccCCCceEEEcCCCCCCCCCCc
Confidence 4799999999999999999999999998 999 8899887421 112222221 0113589999998753222111
Q ss_pred -ChHhHHHHHHHhhhhhHHHHHHhhhhcCCCCCCc-cEEEECCCchhHHHHHHHcCCCeEEEechhHHHHHHHHHHhhhh
Q 045029 81 -PPKRFFGHFVESKKPHVKEVVANLTDESPDSPRL-AGFVLDMFCTCMIEVADEFKVPSYLFFTSGAAFLGFMLRVQALH 158 (485)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~-D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 158 (485)
+....+......+.+.++++++++.+. .++ ||||+|.++.|+..+|+++|||++.+++++++.++.+.+++...
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~ll~~~~~~----~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 155 (480)
T 2vch_A 80 TRIESRISLTVTRSNPELRKVFDSFVEG----GRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLD 155 (480)
T ss_dssp CCHHHHHHHHHHTTHHHHHHHHHHHHHT----TCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhhhHHHHHHHHHhccC----CCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHH
Confidence 222223233444555666666665322 477 99999999999999999999999999999988777777666443
Q ss_pred ccccccccccCCCCCccccCCCCCCCCCCCCCccccCc--cHHHHHHHHHHhhcCCceEEEcChhhhhHHHHHHhhCCCC
Q 045029 159 DEENTTITELKDSDAVLEVPGLVNSVPAKVWPSVVFNK--EWAEVLNQQARTFRGTKGIMVNTFEELESHAVRSFSDGKS 236 (485)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~ 236 (485)
.....+ +...+....+|+++ +++..+++..+... ..+..+.+..+.+++..|+++|++.++|...+..+.+..+
T Consensus 156 ~~~~~~---~~~~~~~~~~Pg~~-p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~ 231 (480)
T 2vch_A 156 ETVSCE---FRELTEPLMLPGCV-PVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGL 231 (480)
T ss_dssp HHCCSC---GGGCSSCBCCTTCC-CBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCT
T ss_pred hcCCCc---ccccCCcccCCCCC-CCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhccc
Confidence 221111 11112234567765 45555566554432 2355556667777888999999999999999888886322
Q ss_pred CCCCeEEeccccCCCCCCCCCCCCCCCChhhHhhhhccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhcCCceEEEEcC
Q 045029 237 KTPPLYPMGPILNIKGENYDLGEGGADKKADIMAWLDDQPESSVVFLCFGSWGSFGEDQVKEIACALEQSGHRFLWSLRR 316 (485)
Q Consensus 237 ~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vyvs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~ 316 (485)
.++++++|||++...... ..+..+++|.+|||+++++++|||||||+...+.+++.++++||+.++++|||++++
T Consensus 232 ~~~~v~~vGpl~~~~~~~-----~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~ 306 (480)
T 2vch_A 232 DKPPVYPVGPLVNIGKQE-----AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRS 306 (480)
T ss_dssp TCCCEEECCCCCCCSCSC-----C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCcEEEEeccccccccc-----cCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECC
Confidence 357899999997543210 002356789999999877899999999999889999999999999999999999987
Q ss_pred CCCCCC---CCCCCCCCCCCCCCChhhHhhhcCCcceEe-ecchhhhhccCCccccccccCchhhHHHHhhCCcEeeccc
Q 045029 317 PPSKDT---FEKPSDYEDPTEVLPEGFMDRTANIGKVIG-WAPQIAVLAHPAIGGFVSHCGWNSTLESIWFGVPIATWPM 392 (485)
Q Consensus 317 ~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~-~~pq~~vL~h~~~~~~itHgG~~s~~eal~~GvP~v~~P~ 392 (485)
....+. ++.+. ..++...+|++|.++++++++++. |+||.+||+|+++++|||||||||++||+++|||||++|+
T Consensus 307 ~~~~~~~~~~~~~~-~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~ 385 (480)
T 2vch_A 307 PSGIANSSYFDSHS-QTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPL 385 (480)
T ss_dssp CCSSTTTTTTCC---CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCC
T ss_pred cccccccccccccc-ccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccc
Confidence 531100 00000 011223589999999988888886 9999999999999999999999999999999999999999
Q ss_pred cccchhhHHHHHHhhceeEEeeecccccccccCCcccCHHHHHHHHHHHhcC--ChHHHHHHHHHHHHHHHhhhcCCChH
Q 045029 393 YAEQQFNAFELVVELGLAVEIKMDYRNDIMIENPTVVNAEVIERGIRCLMEH--NSEMRKRVKEMSEKARKALSDGGSSF 470 (485)
Q Consensus 393 ~~DQ~~na~r~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~l~~av~~vl~~--~~~~r~~a~~~~~~~~~~~~~gg~~~ 470 (485)
++||+.||+++++.+|+|+.++.. +++.+|+++|+++|+++|++ +++||+||+++++++++++.+||+|.
T Consensus 386 ~~DQ~~na~~l~~~~G~g~~l~~~--------~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~ 457 (480)
T 2vch_A 386 YAEQKMNAVLLSEDIRAALRPRAG--------DDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTST 457 (480)
T ss_dssp STTHHHHHHHHHHTTCCEECCCCC--------TTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHH
T ss_pred cccchHHHHHHHHHhCeEEEeecc--------cCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 999999999986557999998642 11268999999999999974 35899999999999999999999999
Q ss_pred HHHHHHHHHHhh
Q 045029 471 SSMGRLIDDFLD 482 (485)
Q Consensus 471 ~~~~~~~~~~~~ 482 (485)
.++++||+++.+
T Consensus 458 ~~~~~~v~~~~~ 469 (480)
T 2vch_A 458 KALSLVALKWKA 469 (480)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999864
No 3
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=1.4e-66 Score=524.56 Aligned_cols=433 Identities=23% Similarity=0.386 Sum_probs=329.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcCCCCCchhhhhhhhhhcc---CCCCCeEEEECCCCCCCCC
Q 045029 2 KKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMKLPHDNTVATYTQSLAAS---NLSSRIKFINLPDDQPDKE 78 (485)
Q Consensus 2 ~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~f~~l~~~~~~~~ 78 (485)
++.||+++|+|++||++|+++||+.|++|||+|+||+++++ .....+... ....+++|+.++++. |++
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~--------~~~~~~~~~~~~~~~~~i~~~~i~~gl-p~~ 76 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTS--------QSNASIFHDSMHTMQCNIKSYDISDGV-PEG 76 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECH--------HHHHHHC-------CTTEEEEECCCCC-CTT
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCc--------hhHHHhhccccccCCCceEEEeCCCCC-CCc
Confidence 45799999999999999999999999999999999999876 222222110 012589999998743 332
Q ss_pred CC---ChHhHHHHHHHhhhhhHHHHHHhhhhcCCCCCCccEEEECCCchhHHHHHHHcCCCeEEEechhHHHHHHHHHHh
Q 045029 79 ST---PPKRFFGHFVESKKPHVKEVVANLTDESPDSPRLAGFVLDMFCTCMIEVADEFKVPSYLFFTSGAAFLGFMLRVQ 155 (485)
Q Consensus 79 ~~---~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~ 155 (485)
.+ .....+..+...+...+++.++++.++ .+.++||||+|.++.|+..+|+++|||++.+++++++.+..+.+.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 154 (456)
T 2c1x_A 77 YVFAGRPQEDIELFTRAAPESFRQGMVMAVAE--TGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYID 154 (456)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHHHHHHHHHHH--HTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHH
T ss_pred ccccCChHHHHHHHHHHhHHHHHHHHHHHHhc--cCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhH
Confidence 21 233334444444445666677665432 1258999999999999999999999999999999887766654443
Q ss_pred hhhccccccccccCCCC-CccccCCCCCCCCCCCCCccccCc----cHHHHHHHHHHhhcCCceEEEcChhhhhHHHHHH
Q 045029 156 ALHDEENTTITELKDSD-AVLEVPGLVNSVPAKVWPSVVFNK----EWAEVLNQQARTFRGTKGIMVNTFEELESHAVRS 230 (485)
Q Consensus 156 ~~~~~~~~~~~~~~~~~-~~~~~P~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~ 230 (485)
......+.... ....+ ...++|+++ .++..+++..+... .....+.+......+..++++||++++|+.+...
T Consensus 155 ~~~~~~~~~~~-~~~~~~~~~~~pg~~-~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~ 232 (456)
T 2c1x_A 155 EIREKIGVSGI-QGREDELLNFIPGMS-KVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTND 232 (456)
T ss_dssp HHHHHHCSSCC-TTCTTCBCTTSTTCT-TCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHH
T ss_pred HHHhccCCccc-ccccccccccCCCCC-cccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHH
Confidence 32211111000 00111 123577875 35555666543311 1123334444555678899999999999998777
Q ss_pred hhCCCCCCCCeEEeccccCCCCCCCCCCCCCCCChhhHhhhhccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhcCCce
Q 045029 231 FSDGKSKTPPLYPMGPILNIKGENYDLGEGGADKKADIMAWLDDQPESSVVFLCFGSWGSFGEDQVKEIACALEQSGHRF 310 (485)
Q Consensus 231 ~~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vyvs~GS~~~~~~~~~~~~~~al~~~~~~~ 310 (485)
+++ .+|++++|||++...... ....+.+|.+||+.++++++|||||||....+.+++.+++++|+..+++|
T Consensus 233 ~~~---~~~~~~~vGpl~~~~~~~------~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~ 303 (456)
T 2c1x_A 233 LKS---KLKTYLNIGPFNLITPPP------VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPF 303 (456)
T ss_dssp HHH---HSSCEEECCCHHHHC---------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCE
T ss_pred HHh---cCCCEEEecCcccCcccc------cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeE
Confidence 776 456899999987543210 01224579999999878899999999998888899999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchhhhhccCCccccccccCchhhHHHHhhCCcEeec
Q 045029 311 LWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQIAVLAHPAIGGFVSHCGWNSTLESIWFGVPIATW 390 (485)
Q Consensus 311 l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~vL~h~~~~~~itHgG~~s~~eal~~GvP~v~~ 390 (485)
||+++... ...+|++|.++.++|+++++|+||.++|+|+++++|||||||||++||+++|||+|++
T Consensus 304 lw~~~~~~--------------~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~ 369 (456)
T 2c1x_A 304 IWSLRDKA--------------RVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICR 369 (456)
T ss_dssp EEECCGGG--------------GGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEEC
T ss_pred EEEECCcc--------------hhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEec
Confidence 99998652 2347888888888999999999999999999999999999999999999999999999
Q ss_pred cccccchhhHHHHHHhhceeEEeeecccccccccCCcccCHHHHHHHHHHHhcCCh---HHHHHHHHHHHHHHHhhhcCC
Q 045029 391 PMYAEQQFNAFELVVELGLAVEIKMDYRNDIMIENPTVVNAEVIERGIRCLMEHNS---EMRKRVKEMSEKARKALSDGG 467 (485)
Q Consensus 391 P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~---~~r~~a~~~~~~~~~~~~~gg 467 (485)
|+++||+.||+++++.||+|+.++.. .+++++|+++|+++|+ ++ +||+||+++++.+++++++||
T Consensus 370 P~~~dQ~~Na~~l~~~~g~g~~l~~~-----------~~~~~~l~~~i~~ll~-~~~~~~~r~~a~~l~~~~~~a~~~gG 437 (456)
T 2c1x_A 370 PFFGDQRLNGRMVEDVLEIGVRIEGG-----------VFTKSGLMSCFDQILS-QEKGKKLRENLRALRETADRAVGPKG 437 (456)
T ss_dssp CCSTTHHHHHHHHHHTSCCEEECGGG-----------SCCHHHHHHHHHHHHH-SHHHHHHHHHHHHHHHHHHHHTSTTC
T ss_pred CChhhHHHHHHHHHHHhCeEEEecCC-----------CcCHHHHHHHHHHHHC-CCcHHHHHHHHHHHHHHHHHhhhcCC
Confidence 99999999999999877999998643 6899999999999998 65 899999999999999999999
Q ss_pred ChHHHHHHHHHHHhh
Q 045029 468 SSFSSMGRLIDDFLD 482 (485)
Q Consensus 468 ~~~~~~~~~~~~~~~ 482 (485)
||+.++++||+++.+
T Consensus 438 sS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 438 SSTENFITLVDLVSK 452 (456)
T ss_dssp HHHHHHHHHHHHHTS
T ss_pred cHHHHHHHHHHHHHh
Confidence 999999999999854
No 4
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1e-65 Score=519.81 Aligned_cols=442 Identities=48% Similarity=0.868 Sum_probs=334.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCCeEEEEEEcCCCCCchhhhhhhhhhccCCCCCeEEEECCCCCCCCCC
Q 045029 2 KKAQLVFIPSPGAGHLVSTVEVARLLVDR--DDRLSVTVLIMKLPHDNTVATYTQSLAASNLSSRIKFINLPDDQPDKES 79 (485)
Q Consensus 2 ~~~~i~~~~~~~~GH~~P~l~La~~L~~r--GH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~ 79 (485)
+++||+++|+|++||++|+++||+.|++| ||+ |||++++..+.......++.+. ....+++|+.+++...+...
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~--Vt~v~t~~~~~~~~~~~~~~~~--~~~~~i~~~~lp~~~~~~~~ 83 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLY--ITVFCIKFPGMPFADSYIKSVL--ASQPQIQLIDLPEVEPPPQE 83 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEE--EEEEECCCTTCCCCHHHHHHHH--CSCTTEEEEECCCCCCCCGG
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcE--EEEEEcCCcchhhhhhhhhhcc--cCCCCceEEECCCCCCCccc
Confidence 35799999999999999999999999999 987 8899988543222223333322 22368999999976433211
Q ss_pred --CChHhHHHHHHHhhhhhHHHHHHhhhhcCCCCCCccEEEECCCchhHHHHHHHcCCCeEEEechhHHHHHHHHHHhhh
Q 045029 80 --TPPKRFFGHFVESKKPHVKEVVANLTDESPDSPRLAGFVLDMFCTCMIEVADEFKVPSYLFFTSGAAFLGFMLRVQAL 157 (485)
Q Consensus 80 --~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 157 (485)
.+....+...+..+.+.++++++++ + ..++||||+|.++.|+..+|+++|||++++++++++.+..+.+++..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~ll~~~-~----~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 158 (463)
T 2acv_A 84 LLKSPEFYILTFLESLIPHVKATIKTI-L----SNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNR 158 (463)
T ss_dssp GGGSHHHHHHHHHHHTHHHHHHHHHHH-C----CTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGS
T ss_pred ccCCccHHHHHHHHhhhHHHHHHHHhc-c----CCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhh
Confidence 1111113333444555666666655 2 25899999999999999999999999999999999877777666544
Q ss_pred hccccccccccCCCCC---ccccCCCCCCCCCCCCCccccCc-cHHHHHHHHHHhhcCCceEEEcChhhhhHHHHHHhhC
Q 045029 158 HDEENTTITELKDSDA---VLEVPGLVNSVPAKVWPSVVFNK-EWAEVLNQQARTFRGTKGIMVNTFEELESHAVRSFSD 233 (485)
Q Consensus 158 ~~~~~~~~~~~~~~~~---~~~~P~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~ 233 (485)
.... + +...+. ...+|++..+++..+++..+... ..+..+.+..+.+++..++++||++++|+.....+.+
T Consensus 159 ~~~~--~---~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~ 233 (463)
T 2acv_A 159 QIEE--V---FDDSDRDHQLLNIPGISNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYD 233 (463)
T ss_dssp CTTC--C---CCCSSGGGCEECCTTCSSCEEGGGSCHHHHCTTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHH
T ss_pred cccC--C---CCCccccCceeECCCCCCCCChHHCchhhcCCchHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHh
Confidence 2110 0 111122 34567773355555555443321 2345555666777888999999999999999888776
Q ss_pred CCCCCCCeEEeccccCCCCCCCCCCCCCCCChhhHhhhhccCCCCcEEEEeecCcc-cCCHHHHHHHHHHHHhcCCceEE
Q 045029 234 GKSKTPPLYPMGPILNIKGENYDLGEGGADKKADIMAWLDDQPESSVVFLCFGSWG-SFGEDQVKEIACALEQSGHRFLW 312 (485)
Q Consensus 234 ~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vyvs~GS~~-~~~~~~~~~~~~al~~~~~~~l~ 312 (485)
..+..+++++|||++....... . ...+..+.++.+||+.++++++|||||||+. ..+.+++.+++++|+..+++|||
T Consensus 234 ~~~p~~~v~~vGpl~~~~~~~~-~-~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~ 311 (463)
T 2acv_A 234 HDEKIPPIYAVGPLLDLKGQPN-P-KLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLW 311 (463)
T ss_dssp HCTTSCCEEECCCCCCSSCCCB-T-TBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred ccccCCcEEEeCCCcccccccc-c-ccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEE
Confidence 3101567999999975431000 0 0001245789999999888899999999998 88888999999999999999999
Q ss_pred EEcCCCCCCCCCCCCCCCCCCCCCChhhHhhh--cCCcceEeecchhhhhccCCccccccccCchhhHHHHhhCCcEeec
Q 045029 313 SLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRT--ANIGKVIGWAPQIAVLAHPAIGGFVSHCGWNSTLESIWFGVPIATW 390 (485)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~~~v~~~~pq~~vL~h~~~~~~itHgG~~s~~eal~~GvP~v~~ 390 (485)
+++.+ ...+|++|.++. ++++++++|+||.++|+|+++++|||||||||++||+++|||+|++
T Consensus 312 ~~~~~---------------~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~ 376 (463)
T 2acv_A 312 SNSAE---------------KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTW 376 (463)
T ss_dssp ECCCC---------------GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEEC
T ss_pred EECCC---------------cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeec
Confidence 99863 123678888777 7899999999999999999999999999999999999999999999
Q ss_pred cccccchhhHHHHHHhhceeEEeeecccccccccCCc--ccCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHhhhcCCC
Q 045029 391 PMYAEQQFNAFELVVELGLAVEIKMDYRNDIMIENPT--VVNAEVIERGIRCLMEHNSEMRKRVKEMSEKARKALSDGGS 468 (485)
Q Consensus 391 P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~~~~~~~~--~~~~~~l~~av~~vl~~~~~~r~~a~~~~~~~~~~~~~gg~ 468 (485)
|+++||+.||+++++.+|+|+.+...+. .+ .+++++|.++|+++|+++++||+||+++++.+++++++|||
T Consensus 377 P~~~dQ~~Na~~lv~~~g~g~~l~~~~~-------~~~~~~~~~~l~~ai~~ll~~~~~~r~~a~~l~~~~~~a~~~gGs 449 (463)
T 2acv_A 377 PIYAEQQLNAFRLVKEWGVGLGLRVDYR-------KGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGS 449 (463)
T ss_dssp CCSTTHHHHHHHHHHTSCCEEESCSSCC-------TTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTSTTSH
T ss_pred cchhhhHHHHHHHHHHcCeEEEEecccC-------CCCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhcCCc
Confidence 9999999999997555799999831100 02 48999999999999974479999999999999999999999
Q ss_pred hHHHHHHHHHHHh
Q 045029 469 SFSSMGRLIDDFL 481 (485)
Q Consensus 469 ~~~~~~~~~~~~~ 481 (485)
|+.++++||+++.
T Consensus 450 s~~~l~~~v~~~~ 462 (463)
T 2acv_A 450 SLISVGKLIDDIT 462 (463)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999985
No 5
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=2.2e-65 Score=521.08 Aligned_cols=443 Identities=27% Similarity=0.460 Sum_probs=324.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcCCCCCchhhhhhhhhhccC-----C-CCCeEEEECCCCC
Q 045029 1 MKKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMKLPHDNTVATYTQSLAASN-----L-SSRIKFINLPDDQ 74 (485)
Q Consensus 1 m~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~i~f~~l~~~~ 74 (485)
|+++||+++|+|++||++|++.||++|++|||+ |||++++ .+...+.... . ..+++|+.+++..
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~--VT~v~t~--------~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l 75 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFH--ITFVNTE--------YNHKRLLKSRGPKAFDGFTDFNFESIPDGL 75 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCE--EEEEEEH--------HHHHHHC------------CEEEEEECCCC
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCe--EEEEeCC--------chhhhhccccccccccCCCceEEEECCCCC
Confidence 456799999999999999999999999999999 8899887 3333332110 0 1489999998643
Q ss_pred CCCC---C---CChHhHHHHHHHhhhhhHHHHHHhhhhcCCCCCCccEEEECCCchhHHHHHHHcCCCeEEEechhHHHH
Q 045029 75 PDKE---S---TPPKRFFGHFVESKKPHVKEVVANLTDESPDSPRLAGFVLDMFCTCMIEVADEFKVPSYLFFTSGAAFL 148 (485)
Q Consensus 75 ~~~~---~---~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~ 148 (485)
|+. . .+...++..+...+.+.++++++.+.++ ....++||||+|.++.|+..+|+++|||++.+++++++..
T Consensus 76 -p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~-~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~ 153 (482)
T 2pq6_A 76 -TPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHS-TNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSL 153 (482)
T ss_dssp -C---------CCHHHHHHHHTTSSHHHHHHHHHHHHTC-SSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHH
T ss_pred -CCcccccCcchhHHHHHHHHHHHhhHHHHHHHHHHhhh-ccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHH
Confidence 321 1 1222223332244555666666665421 0024899999999999999999999999999999988766
Q ss_pred HHHHHHhhhhccccccccccC--C----CCCccccCCCCCCCCCCCCCccccCc----cHHHHHHHHHHhhcCCceEEEc
Q 045029 149 GFMLRVQALHDEENTTITELK--D----SDAVLEVPGLVNSVPAKVWPSVVFNK----EWAEVLNQQARTFRGTKGIMVN 218 (485)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~P~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 218 (485)
..+.+++.....+..+..... . ......+|+++ .++..+++..+... .....+.+..+...+..++++|
T Consensus 154 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~n 232 (482)
T 2pq6_A 154 LNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLK-NFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLN 232 (482)
T ss_dssp HHHTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCC-SCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEES
T ss_pred HHHHHHHHHHhcCCCCCccccccccccccCccccCCCCC-CCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEc
Confidence 655444432222211110000 0 00111345653 34445555444321 1233444555666788899999
Q ss_pred ChhhhhHHHHHHhhCCCCCCCCeEEeccccCC-CCCCC-----CCCCCCCCChhhHhhhhccCCCCcEEEEeecCcccCC
Q 045029 219 TFEELESHAVRSFSDGKSKTPPLYPMGPILNI-KGENY-----DLGEGGADKKADIMAWLDDQPESSVVFLCFGSWGSFG 292 (485)
Q Consensus 219 s~~~le~~~~~~~~~~~~~~p~v~~vGpl~~~-~~~~~-----~~~~~~~~~~~~l~~~l~~~~~~~~vyvs~GS~~~~~ 292 (485)
|+++||++++..+++ .++++++|||++.. ..... ......++.+.+|.+|||+++++++|||||||....+
T Consensus 233 t~~~le~~~~~~~~~---~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~ 309 (482)
T 2pq6_A 233 TFNELESDVINALSS---TIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMT 309 (482)
T ss_dssp SCGGGGHHHHHHHHT---TCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCC
T ss_pred ChHHHhHHHHHHHHH---hCCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCC
Confidence 999999998888887 34789999999753 11100 0000001234579999999877899999999998888
Q ss_pred HHHHHHHHHHHHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchhhhhccCCcccccccc
Q 045029 293 EDQVKEIACALEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQIAVLAHPAIGGFVSHC 372 (485)
Q Consensus 293 ~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~vL~h~~~~~~itHg 372 (485)
.+++.+++.+|+.++++|||+++.+...+. ...+|++|.++.++|+++++|+||.++|+|+++++|||||
T Consensus 310 ~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~----------~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~ 379 (482)
T 2pq6_A 310 PEQLLEFAWGLANCKKSFLWIIRPDLVIGG----------SVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHC 379 (482)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCGGGSTTT----------GGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECC
T ss_pred HHHHHHHHHHHHhcCCcEEEEEcCCccccc----------cccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecC
Confidence 999999999999999999999986421110 1237889988888999999999999999999999999999
Q ss_pred CchhhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEeeecccccccccCCcccCHHHHHHHHHHHhcCCh---HHH
Q 045029 373 GWNSTLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYRNDIMIENPTVVNAEVIERGIRCLMEHNS---EMR 449 (485)
Q Consensus 373 G~~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~---~~r 449 (485)
||||++||+++|||+|++|+++||+.||+++++.+|+|+.++ . .+++++|.++|+++|+ |+ +||
T Consensus 380 G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~-----------~~~~~~l~~~i~~ll~-~~~~~~~r 446 (482)
T 2pq6_A 380 GWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-T-----------NVKREELAKLINEVIA-GDKGKKMK 446 (482)
T ss_dssp CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-S-----------SCCHHHHHHHHHHHHT-SHHHHHHH
T ss_pred CcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-C-----------CCCHHHHHHHHHHHHc-CCcHHHHH
Confidence 999999999999999999999999999999885569999986 4 6899999999999998 66 699
Q ss_pred HHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhh
Q 045029 450 KRVKEMSEKARKALSDGGSSFSSMGRLIDDFLD 482 (485)
Q Consensus 450 ~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~ 482 (485)
+||+++++.+++++.+||||..++++||+++.+
T Consensus 447 ~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~~ 479 (482)
T 2pq6_A 447 QKAMELKKKAEENTRPGGCSYMNLNKVIKDVLL 479 (482)
T ss_dssp HHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999854
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=4.1e-44 Score=360.04 Aligned_cols=395 Identities=18% Similarity=0.243 Sum_probs=256.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcCCCCCchhhhhhhhhhccCCCCCeEEEECCCCCCCCCC-
Q 045029 1 MKKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMKLPHDNTVATYTQSLAASNLSSRIKFINLPDDQPDKES- 79 (485)
Q Consensus 1 m~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~- 79 (485)
|+++||+|+++|++||++|+++||++|++|||+ ||+++++ .+.+.+. ..+++|+.++... +.+.
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~--V~~~~~~--------~~~~~~~----~~g~~~~~~~~~~-~~~~~ 74 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHR--VSYAITD--------EFAAQVK----AAGATPVVYDSIL-PKESN 74 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCE--EEEEECG--------GGHHHHH----HHTCEEEECCCCS-CCTTC
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCe--EEEEeCH--------HHHHHHH----hCCCEEEecCccc-ccccc
Confidence 667899999999999999999999999999999 7799887 4444443 3478888887642 2111
Q ss_pred ------CChHhHHHHHHHhhhhhHHHHHHhhhhcCCCCCCccEEEECCCchhHHHHHHHcCCCeEEEechhHHHHHHHHH
Q 045029 80 ------TPPKRFFGHFVESKKPHVKEVVANLTDESPDSPRLAGFVLDMFCTCMIEVADEFKVPSYLFFTSGAAFLGFMLR 153 (485)
Q Consensus 80 ------~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 153 (485)
.+....+..+........ +.+.++++. .+|||||+|.+..|+..+|+++|||++.+++.+..... +.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~----~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~-~~~ 148 (424)
T 2iya_A 75 PEESWPEDQESAMGLFLDEAVRVL-PQLEDAYAD----DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEG-FEE 148 (424)
T ss_dssp TTCCCCSSHHHHHHHHHHHHHHHH-HHHHHHTTT----SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTT-HHH
T ss_pred chhhcchhHHHHHHHHHHHHHHHH-HHHHHHHhc----cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccc-ccc
Confidence 122222222233222222 333444443 58999999998889999999999999999876642110 000
Q ss_pred HhhhhccccccccccCCCCCccccCCCCCCCCCCCCCccccCccH-HHHHHHHHHh----------hcCCceEEEcChhh
Q 045029 154 VQALHDEENTTITELKDSDAVLEVPGLVNSVPAKVWPSVVFNKEW-AEVLNQQART----------FRGTKGIMVNTFEE 222 (485)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~----------~~~~~~~~~~s~~~ 222 (485)
........ +.........|... ... ..+......... ...+...... ......+++++..+
T Consensus 149 ~~~~~~~~------~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~ 220 (424)
T 2iya_A 149 DVPAVQDP------TADRGEEAAAPAGT-GDA-EEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRT 220 (424)
T ss_dssp HSGGGSCC------CC-----------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTT
T ss_pred cccccccc------cccccccccccccc-ccc-hhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchh
Confidence 00000000 00000000000000 000 000000000000 0111111111 11345567777777
Q ss_pred hhHHHHHHhhCCCCCCCCeEEeccccCCCCCCCCCCCCCCCChhhHhhhhccCCCCcEEEEeecCcccCCHHHHHHHHHH
Q 045029 223 LESHAVRSFSDGKSKTPPLYPMGPILNIKGENYDLGEGGADKKADIMAWLDDQPESSVVFLCFGSWGSFGEDQVKEIACA 302 (485)
Q Consensus 223 le~~~~~~~~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vyvs~GS~~~~~~~~~~~~~~a 302 (485)
++... .. ..+++++|||++.... +..+|++..+++++|||+|||......+.+.+++++
T Consensus 221 l~~~~----~~---~~~~~~~vGp~~~~~~--------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~a 279 (424)
T 2iya_A 221 FQIKG----DT---VGDNYTFVGPTYGDRS--------------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSA 279 (424)
T ss_dssp TSTTG----GG---CCTTEEECCCCCCCCG--------------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHH
T ss_pred hCCCc----cC---CCCCEEEeCCCCCCcc--------------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHH
Confidence 66532 11 3346999999753211 124677665567899999999986667888999999
Q ss_pred HHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchhhhhccCCccccccccCchhhHHHHh
Q 045029 303 LEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQIAVLAHPAIGGFVSHCGWNSTLESIW 382 (485)
Q Consensus 303 l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~vL~h~~~~~~itHgG~~s~~eal~ 382 (485)
++..+++++|.++..... +.+ ...++|+.+++|+||.++|+|+++ ||||||+||++||++
T Consensus 280 l~~~~~~~~~~~g~~~~~-----------------~~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~ 339 (424)
T 2iya_A 280 VDGLDWHVVLSVGRFVDP-----------------ADL-GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALS 339 (424)
T ss_dssp HTTCSSEEEEECCTTSCG-----------------GGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHH
T ss_pred HhcCCcEEEEEECCcCCh-----------------HHh-ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHH
Confidence 998899999998764200 000 112356899999999999999998 999999999999999
Q ss_pred hCCcEeeccccccchhhHHHHHHhhceeEEeeecccccccccCCcccCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHh
Q 045029 383 FGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYRNDIMIENPTVVNAEVIERGIRCLMEHNSEMRKRVKEMSEKARKA 462 (485)
Q Consensus 383 ~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~r~~a~~~~~~~~~~ 462 (485)
+|||+|++|++.||+.||+++++ +|+|+.++.+ .++.++|.++|+++|+ |+++|++++++++.+++.
T Consensus 340 ~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~-----------~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~ 406 (424)
T 2iya_A 340 NAVPMVAVPQIAEQTMNAERIVE-LGLGRHIPRD-----------QVTAEKLREAVLAVAS-DPGVAERLAAVRQEIREA 406 (424)
T ss_dssp TTCCEEECCCSHHHHHHHHHHHH-TTSEEECCGG-----------GCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHTS
T ss_pred cCCCEEEecCccchHHHHHHHHH-CCCEEEcCcC-----------CCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999887 4999998754 6899999999999999 789999999999998763
Q ss_pred hhcCCChHHHHHHHHHHHhhc
Q 045029 463 LSDGGSSFSSMGRLIDDFLDN 483 (485)
Q Consensus 463 ~~~gg~~~~~~~~~~~~~~~~ 483 (485)
+|+ ..+.+.|.++..+
T Consensus 407 ---~~~--~~~~~~i~~~~~~ 422 (424)
T 2iya_A 407 ---GGA--RAAADILEGILAE 422 (424)
T ss_dssp ---CHH--HHHHHHHHHHHHH
T ss_pred ---CcH--HHHHHHHHHHHhc
Confidence 333 3445555555543
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=3.3e-44 Score=357.99 Aligned_cols=356 Identities=15% Similarity=0.173 Sum_probs=225.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcCCCCCchhhhhhhhhhccCCCCCeEEEECCCCCC------
Q 045029 2 KKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMKLPHDNTVATYTQSLAASNLSSRIKFINLPDDQP------ 75 (485)
Q Consensus 2 ~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~------ 75 (485)
+.|||+|+++|++||++|+++||++|++|||+ |||++++ .+.... ..++.+..+.....
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~--Vt~~t~~--------~~~~~~-----~~g~~~~~~~~~~~~~~~~~ 85 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHE--VRYATGG--------DIRAVA-----EAGLCAVDVSPGVNYAKLFV 85 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCE--EEEEECS--------STHHHH-----TTTCEEEESSTTCCSHHHHS
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCE--EEEEeCc--------chhhHH-----hcCCeeEecCCchhHhhhcc
Confidence 35799999999999999999999999999999 7799877 343333 34677777654321
Q ss_pred CCCCC----------ChHhHHHHHHHhhhhhHHHHHHhhhhcCCCCCCccEEEECCCchhHHHHHHHcCCCeEEEechhH
Q 045029 76 DKEST----------PPKRFFGHFVESKKPHVKEVVANLTDESPDSPRLAGFVLDMFCTCMIEVADEFKVPSYLFFTSGA 145 (485)
Q Consensus 76 ~~~~~----------~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~ 145 (485)
+.... ........+.......+..+++.+ +. .+||+||+|.+..++..+|+++|||++.+...+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~----~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~ 160 (400)
T 4amg_A 86 PDDTDVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTA-RS----WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPA 160 (400)
T ss_dssp CCC------------CHHHHHHHHHHHHHHHHHHHHHHH-HH----HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTT
T ss_pred ccccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-Hh----cCCCEEEECcchHHHHHHHHHcCCCceeeccccc
Confidence 00000 111111111122222333333333 32 4899999999999999999999999988755443
Q ss_pred HHHHHHHHHhhhhccccccccccCCCCCccccCCCCCCCCCCCCCccccCccHHHHHHHHHHhh----cCCceEEEcChh
Q 045029 146 AFLGFMLRVQALHDEENTTITELKDSDAVLEVPGLVNSVPAKVWPSVVFNKEWAEVLNQQARTF----RGTKGIMVNTFE 221 (485)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~s~~ 221 (485)
.....+..... +.+.....+. ............
T Consensus 161 ~~~~~~~~~~~-------------------------------------------~~l~~~~~~~~~~~~~~~~~~~~~~~ 197 (400)
T 4amg_A 161 DSEPGLGALIR-------------------------------------------RAMSKDYERHGVTGEPTGSVRLTTTP 197 (400)
T ss_dssp TCCHHHHHHHH-------------------------------------------HHTHHHHHHTTCCCCCSCEEEEECCC
T ss_pred ccccchhhHHH-------------------------------------------HHHHHHHHHhCCCcccccchhhcccC
Confidence 21111110000 0000000000 001111111111
Q ss_pred hhhHHHHHHhhCCCCCCCCeEEeccccCCCCCCCCCCCCCCCChhhHhhhhccCCCCcEEEEeecCcccCC--HHHHHHH
Q 045029 222 ELESHAVRSFSDGKSKTPPLYPMGPILNIKGENYDLGEGGADKKADIMAWLDDQPESSVVFLCFGSWGSFG--EDQVKEI 299 (485)
Q Consensus 222 ~le~~~~~~~~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vyvs~GS~~~~~--~~~~~~~ 299 (485)
.............+..+++.+... .....+.+|++..+++++|||||||+.... .+.+.++
T Consensus 198 ----~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~ 260 (400)
T 4amg_A 198 ----PSVEALLPEDRRSPGAWPMRYVPY-------------NGGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPL 260 (400)
T ss_dssp ----HHHHHTSCGGGCCTTCEECCCCCC-------------CCCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHH
T ss_pred ----chhhccCcccccCCcccCcccccc-------------cccccCcccccccCCCcEEEEeCCcccccCccHHHHHHH
Confidence 000111110001122333332211 123344568888888899999999986443 3568889
Q ss_pred HHHHHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchhhhhccCCccccccccCchhhHH
Q 045029 300 ACALEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQIAVLAHPAIGGFVSHCGWNSTLE 379 (485)
Q Consensus 300 ~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~vL~h~~~~~~itHgG~~s~~e 379 (485)
++++++.+.++||..++.... ....+| +|+++.+|+||.++|+|+++ |||||||||++|
T Consensus 261 ~~~l~~~~~~~v~~~~~~~~~-----------~~~~~~--------~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~E 319 (400)
T 4amg_A 261 FSEVADVDAEFVLTLGGGDLA-----------LLGELP--------ANVRVVEWIPLGALLETCDA--IIHHGGSGTLLT 319 (400)
T ss_dssp HHHGGGSSSEEEEECCTTCCC-----------CCCCCC--------TTEEEECCCCHHHHHTTCSE--EEECCCHHHHHH
T ss_pred HHHhhccCceEEEEecCcccc-----------ccccCC--------CCEEEEeecCHHHHhhhhhh--eeccCCccHHHH
Confidence 999999999999998765211 012234 56899999999999999888 999999999999
Q ss_pred HHhhCCcEeeccccccchhhHHHHHHhhceeEEeeecccccccccCCcccCHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 045029 380 SIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYRNDIMIENPTVVNAEVIERGIRCLMEHNSEMRKRVKEMSEKA 459 (485)
Q Consensus 380 al~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~r~~a~~~~~~~ 459 (485)
|+++|||+|++|+++||+.||+++++. |+|+.++.. .+++ ++|+++|+ |++||+||+++++++
T Consensus 320 al~~GvP~v~~P~~~dQ~~na~~v~~~-G~g~~l~~~-----------~~~~----~al~~lL~-d~~~r~~a~~l~~~~ 382 (400)
T 4amg_A 320 ALAAGVPQCVIPHGSYQDTNRDVLTGL-GIGFDAEAG-----------SLGA----EQCRRLLD-DAGLREAALRVRQEM 382 (400)
T ss_dssp HHHHTCCEEECCC---CHHHHHHHHHH-TSEEECCTT-----------TCSH----HHHHHHHH-CHHHHHHHHHHHHHH
T ss_pred HHHhCCCEEEecCcccHHHHHHHHHHC-CCEEEcCCC-----------CchH----HHHHHHHc-CHHHHHHHHHHHHHH
Confidence 999999999999999999999998885 999998744 5555 46778888 899999999999999
Q ss_pred HHhhhcCCChHHHHHHHHHHH
Q 045029 460 RKALSDGGSSFSSMGRLIDDF 480 (485)
Q Consensus 460 ~~~~~~gg~~~~~~~~~~~~~ 480 (485)
++. .|. ..+.+.|+.|
T Consensus 383 ~~~---~~~--~~~a~~le~l 398 (400)
T 4amg_A 383 SEM---PPP--AETAAXLVAL 398 (400)
T ss_dssp HTS---CCH--HHHHHHHHHH
T ss_pred HcC---CCH--HHHHHHHHHh
Confidence 875 333 3344455443
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=6.1e-43 Score=350.33 Aligned_cols=371 Identities=14% Similarity=0.112 Sum_probs=243.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcCCCCCchhhhhhhhhhccCCCCCeEEEECCCCCCC--CCCC-
Q 045029 4 AQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMKLPHDNTVATYTQSLAASNLSSRIKFINLPDDQPD--KEST- 80 (485)
Q Consensus 4 ~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~--~~~~- 80 (485)
+||+|++.|+.||++|+++||++|++|||+ ||+++++ .+.+.+. ..+++|+.++..... ....
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~--V~~~~~~--------~~~~~v~----~~g~~~~~i~~~~~~~~~~~~~ 66 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGAD--VRMCAPP--------DCAERLA----EVGVPHVPVGPSARAPIQRAKP 66 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCE--EEEEECG--------GGHHHHH----HTTCCEEECCC-------CCSC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCe--EEEEcCH--------HHHHHHH----HcCCeeeeCCCCHHHHhhcccc
Confidence 479999999999999999999999999999 7799887 3333333 357888888764211 0101
Q ss_pred ChHhHHHHHHHhhhhhHHHHHHhhhhcCCCCCCccEEEECC-Cchh--HHHHHHHcCCCeEEEechhHHHHHHHHHHhhh
Q 045029 81 PPKRFFGHFVESKKPHVKEVVANLTDESPDSPRLAGFVLDM-FCTC--MIEVADEFKVPSYLFFTSGAAFLGFMLRVQAL 157 (485)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~D~vI~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 157 (485)
.....+. ..+.......++++.+. ..+|||||+|. +..| +..+|+++|||++.+++++....
T Consensus 67 ~~~~~~~---~~~~~~~~~~~~~l~~~---~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~--------- 131 (415)
T 1iir_A 67 LTAEDVR---RFTTEAIATQFDEIPAA---AEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP--------- 131 (415)
T ss_dssp CCHHHHH---HHHHHHHHHHHHHHHHH---TTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC---------
T ss_pred cchHHHH---HHHHHHHHHHHHHHHHH---hcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCC---------
Confidence 1111111 22222334455555431 25899999998 6778 88999999999999987765310
Q ss_pred hccccccccccCCCCCccccCCCCCCCCCCCCCcc-ccCccH--------HHHHHHHHHhhcCCc---------------
Q 045029 158 HDEENTTITELKDSDAVLEVPGLVNSVPAKVWPSV-VFNKEW--------AEVLNQQARTFRGTK--------------- 213 (485)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~l~~~-~~~~~~--------~~~~~~~~~~~~~~~--------------- 213 (485)
..++|.....+ .++.. ..+... +..+....+.+++..
T Consensus 132 ----------------~~~~p~~~~~~---~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 192 (415)
T 1iir_A 132 ----------------SPYYPPPPLGE---PSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD 192 (415)
T ss_dssp ----------------CSSSCCCC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS
T ss_pred ----------------CcccCCccCCc---cccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC
Confidence 00111110000 01000 111100 111111111121111
Q ss_pred eEEEcChhhhhHHHHHHhhCCCCCCCCeEEeccccCCCCCCCCCCCCCCCChhhHhhhhccCCCCcEEEEeecCcccCCH
Q 045029 214 GIMVNTFEELESHAVRSFSDGKSKTPPLYPMGPILNIKGENYDLGEGGADKKADIMAWLDDQPESSVVFLCFGSWGSFGE 293 (485)
Q Consensus 214 ~~~~~s~~~le~~~~~~~~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vyvs~GS~~~~~~ 293 (485)
.++.++...+++. .++.+ ++++|||++.... +..++++.+||++++ ++|||+|||.. ...
T Consensus 193 ~~l~~~~~~l~~~-------~~~~~-~~~~vG~~~~~~~---------~~~~~~~~~~l~~~~--~~v~v~~Gs~~-~~~ 252 (415)
T 1iir_A 193 HPWVAADPVLAPL-------QPTDL-DAVQTGAWILPDE---------RPLSPELAAFLDAGP--PPVYLGFGSLG-APA 252 (415)
T ss_dssp SCEECSCTTTSCC-------CCCSS-CCEECCCCCCCCC---------CCCCHHHHHHHHTSS--CCEEEECC----CCH
T ss_pred CEEEeeChhhcCC-------CcccC-CeEeeCCCccCcc---------cCCCHHHHHHHhhCC--CeEEEeCCCCC-CcH
Confidence 1233333333220 00022 6899999865322 345678999998753 59999999987 567
Q ss_pred HHHHHHHHHHHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchhhhhccCCccccccccC
Q 045029 294 DQVKEIACALEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQIAVLAHPAIGGFVSHCG 373 (485)
Q Consensus 294 ~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~vL~h~~~~~~itHgG 373 (485)
+.+..++++|+..+.++||++|+... + ...+| +|+.+++|+||.++|+++++ ||||||
T Consensus 253 ~~~~~~~~al~~~~~~~v~~~g~~~~-----------~-~~~~~--------~~v~~~~~~~~~~~l~~~d~--~v~~~G 310 (415)
T 1iir_A 253 DAVRVAIDAIRAHGRRVILSRGWADL-----------V-LPDDG--------ADCFAIGEVNHQVLFGRVAA--VIHHGG 310 (415)
T ss_dssp HHHHHHHHHHHHTTCCEEECTTCTTC-----------C-CSSCG--------GGEEECSSCCHHHHGGGSSE--EEECCC
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCCcc-----------c-ccCCC--------CCEEEeCcCChHHHHhhCCE--EEeCCC
Confidence 77888999999999999999886520 0 01122 46888999999999976666 999999
Q ss_pred chhhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEeeecccccccccCCcccCHHHHHHHHHHHhcCChHHHHHHH
Q 045029 374 WNSTLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYRNDIMIENPTVVNAEVIERGIRCLMEHNSEMRKRVK 453 (485)
Q Consensus 374 ~~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~r~~a~ 453 (485)
+||++||+++|||+|++|+++||+.||+++++. |+|+.++.+ .++.++|.++|+++ + |+++|++++
T Consensus 311 ~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~~-----------~~~~~~l~~~i~~l-~-~~~~~~~~~ 376 (415)
T 1iir_A 311 AGTTHVAARAGAPQILLPQMADQPYYAGRVAEL-GVGVAHDGP-----------IPTFDSLSAALATA-L-TPETHARAT 376 (415)
T ss_dssp HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-TSEEECSSS-----------SCCHHHHHHHHHHH-T-SHHHHHHHH
T ss_pred hhHHHHHHHcCCCEEECCCCCccHHHHHHHHHC-CCcccCCcC-----------CCCHHHHHHHHHHH-c-CHHHHHHHH
Confidence 999999999999999999999999999998775 999988654 68999999999999 7 899999999
Q ss_pred HHHHHHHHhhhcCCChHHHHHHHHHHHhhc
Q 045029 454 EMSEKARKALSDGGSSFSSMGRLIDDFLDN 483 (485)
Q Consensus 454 ~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~ 483 (485)
++++.+++ ..+...+.++|+++.++
T Consensus 377 ~~~~~~~~-----~~~~~~~~~~i~~~~~~ 401 (415)
T 1iir_A 377 AVAGTIRT-----DGAAVAARLLLDAVSRE 401 (415)
T ss_dssp HHHHHSCS-----CHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhh-----cChHHHHHHHHHHHHhc
Confidence 99988753 22234555666665543
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=4.4e-42 Score=344.30 Aligned_cols=373 Identities=14% Similarity=0.101 Sum_probs=244.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcCCCCCchhhhhhhhhhccCCCCCeEEEECCCCCC---CCCCC
Q 045029 4 AQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMKLPHDNTVATYTQSLAASNLSSRIKFINLPDDQP---DKEST 80 (485)
Q Consensus 4 ~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~---~~~~~ 80 (485)
+||+|++.++.||++|+++||++|+++||+ ||+++++ .+.+.+. ..|++|+.++.... .....
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~--V~~~~~~--------~~~~~v~----~~g~~~~~~~~~~~~~~~~~~~ 66 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQ--TRMCAPP--------AAEERLA----EVGVPHVPVGLPQHMMLQEGMP 66 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCE--EEEEECG--------GGHHHHH----HHTCCEEECSCCGGGCCCTTSC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCe--EEEEeCH--------HHHHHHH----HcCCeeeecCCCHHHHHhhccc
Confidence 479999999999999999999999999999 7799876 3444333 34788888875421 10011
Q ss_pred -ChHhHHHHHHHhhhhhHHHHHHhhhhcCCCCCCccEEEECC-Cchh--HHHHHHHcCCCeEEEechhHHHHHHHHHHhh
Q 045029 81 -PPKRFFGHFVESKKPHVKEVVANLTDESPDSPRLAGFVLDM-FCTC--MIEVADEFKVPSYLFFTSGAAFLGFMLRVQA 156 (485)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~D~vI~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 156 (485)
.....+..++. ......++.+.+. ..+||+||+|. +..+ +..+|+++|||++.+++.+....
T Consensus 67 ~~~~~~~~~~~~---~~~~~~~~~l~~~---~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~-------- 132 (416)
T 1rrv_A 67 PPPPEEEQRLAA---MTVEMQFDAVPGA---AEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA-------- 132 (416)
T ss_dssp CCCHHHHHHHHH---HHHHHHHHHHHHH---TTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC--------
T ss_pred cchhHHHHHHHH---HHHHHHHHHHHHH---hcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC--------
Confidence 11111222221 2224444444421 24899999997 4566 78899999999999887764210
Q ss_pred hhccccccccccCCCCCccccC-CCCCCCCCCCCCccccCc----cHHHHHHHHHHhhcCCc---------------eEE
Q 045029 157 LHDEENTTITELKDSDAVLEVP-GLVNSVPAKVWPSVVFNK----EWAEVLNQQARTFRGTK---------------GIM 216 (485)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~P-~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~---------------~~~ 216 (485)
..++| .+..++...++.+.+... ..+..+....+.+++.. .++
T Consensus 133 -----------------~~~~p~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l 195 (416)
T 1rrv_A 133 -----------------SPHLPPAYDEPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGERPL 195 (416)
T ss_dssp -----------------CSSSCCCBCSCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCSSCE
T ss_pred -----------------CcccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCCCeE
Confidence 00111 110000000011111000 00011111111111111 234
Q ss_pred EcChhhhhHHHHHHhhCCCCCCCCeEEeccccCCCCCCCCCCCCCCCChhhHhhhhccCCCCcEEEEeecCccc-CCHHH
Q 045029 217 VNTFEELESHAVRSFSDGKSKTPPLYPMGPILNIKGENYDLGEGGADKKADIMAWLDDQPESSVVFLCFGSWGS-FGEDQ 295 (485)
Q Consensus 217 ~~s~~~le~~~~~~~~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vyvs~GS~~~-~~~~~ 295 (485)
+++..+++++. +.+ ++++|||+..... +..++++.+||++++ ++|||+|||... ...+.
T Consensus 196 ~~~~~~l~~~~--------~~~-~~~~vG~~~~~~~---------~~~~~~~~~~l~~~~--~~v~v~~Gs~~~~~~~~~ 255 (416)
T 1rrv_A 196 LAADPVLAPLQ--------PDV-DAVQTGAWLLSDE---------RPLPPELEAFLAAGS--PPVHIGFGSSSGRGIADA 255 (416)
T ss_dssp ECSCTTTSCCC--------SSC-CCEECCCCCCCCC---------CCCCHHHHHHHHSSS--CCEEECCTTCCSHHHHHH
T ss_pred EccCccccCCC--------CCC-CeeeECCCccCcc---------CCCCHHHHHHHhcCC--CeEEEecCCCCccChHHH
Confidence 44444443210 012 6899999865322 335678999998753 699999999864 34566
Q ss_pred HHHHHHHHHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchhhhhccCCccccccccCch
Q 045029 296 VKEIACALEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQIAVLAHPAIGGFVSHCGWN 375 (485)
Q Consensus 296 ~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~vL~h~~~~~~itHgG~~ 375 (485)
+.+++++++..+.++||++|+... ++ ..+ ++|+.+++|+||.++|+++++ ||||||+|
T Consensus 256 ~~~~~~al~~~~~~~v~~~g~~~~-----------~~-~~~--------~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~ 313 (416)
T 1rrv_A 256 AKVAVEAIRAQGRRVILSRGWTEL-----------VL-PDD--------RDDCFAIDEVNFQALFRRVAA--VIHHGSAG 313 (416)
T ss_dssp HHHHHHHHHHTTCCEEEECTTTTC-----------CC-SCC--------CTTEEEESSCCHHHHGGGSSE--EEECCCHH
T ss_pred HHHHHHHHHHCCCeEEEEeCCccc-----------cc-cCC--------CCCEEEeccCChHHHhccCCE--EEecCChh
Confidence 888999999999999999886520 00 112 356889999999999977777 99999999
Q ss_pred hhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEeeecccccccccCCcccCHHHHHHHHHHHhcCChHHHHHHHHH
Q 045029 376 STLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYRNDIMIENPTVVNAEVIERGIRCLMEHNSEMRKRVKEM 455 (485)
Q Consensus 376 s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~r~~a~~~ 455 (485)
|++||+++|||+|++|++.||+.||+++++. |+|+.++.+ .++.++|.++|+++ + |++||++++++
T Consensus 314 t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~~-----------~~~~~~l~~~i~~l-~-~~~~~~~~~~~ 379 (416)
T 1rrv_A 314 TEHVATRAGVPQLVIPRNTDQPYFAGRVAAL-GIGVAHDGP-----------TPTFESLSAALTTV-L-APETRARAEAV 379 (416)
T ss_dssp HHHHHHHHTCCEEECCCSBTHHHHHHHHHHH-TSEEECSSS-----------CCCHHHHHHHHHHH-T-SHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEccCCCCcHHHHHHHHHC-CCccCCCCC-----------CCCHHHHHHHHHHh-h-CHHHHHHHHHH
Confidence 9999999999999999999999999998875 999988654 68999999999999 7 89999999999
Q ss_pred HHHHHHhhhcCCChHHHHHHHH-HHHhhc
Q 045029 456 SEKARKALSDGGSSFSSMGRLI-DDFLDN 483 (485)
Q Consensus 456 ~~~~~~~~~~gg~~~~~~~~~~-~~~~~~ 483 (485)
++.+++ .++. . +.+.| +++.++
T Consensus 380 ~~~~~~----~~~~-~-~~~~i~e~~~~~ 402 (416)
T 1rrv_A 380 AGMVLT----DGAA-A-AADLVLAAVGRE 402 (416)
T ss_dssp TTTCCC----CHHH-H-HHHHHHHHHHC-
T ss_pred HHHHhh----cCcH-H-HHHHHHHHHhcc
Confidence 887664 2333 3 44444 666543
No 10
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=1.1e-39 Score=325.24 Aligned_cols=345 Identities=14% Similarity=0.125 Sum_probs=232.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcCCCCCchhhhhhhhhhccCCCCCeEEEECCCCCCCC-CC--C
Q 045029 4 AQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMKLPHDNTVATYTQSLAASNLSSRIKFINLPDDQPDK-ES--T 80 (485)
Q Consensus 4 ~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~-~~--~ 80 (485)
+||+|++.++.||++|+++||++|++|||+ |++++++ .+.+.+. ..++.|..++...... .. .
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~--V~v~~~~--------~~~~~v~----~~g~~~~~l~~~~~~~~~~~~~ 66 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGAD--ARMCLPP--------DYVERCA----EVGVPMVPVGRAVRAGAREPGE 66 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCC--EEEEECG--------GGHHHHH----HTTCCEEECSSCSSGGGSCTTC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCe--EEEEeCH--------HHHHHHH----HcCCceeecCCCHHHHhccccC
Confidence 469999999999999999999999999999 6788876 5555554 4688888887543210 00 0
Q ss_pred ChHhHHHHHHHhhhhhHHHHHHhhhhcCCCCCCccEEEECCCchhH---HHHHHHcCCCeEEEechhHHHHHHHHHHhhh
Q 045029 81 PPKRFFGHFVESKKPHVKEVVANLTDESPDSPRLAGFVLDMFCTCM---IEVADEFKVPSYLFFTSGAAFLGFMLRVQAL 157 (485)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~D~vI~D~~~~~~---~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 157 (485)
........+.......++.+ .++. .++|+||+|.....+ ..+|+++|||++.+..++....+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~l-~~~~------~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~-------- 131 (404)
T 3h4t_A 67 LPPGAAEVVTEVVAEWFDKV-PAAI------EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPS-------- 131 (404)
T ss_dssp CCTTCGGGHHHHHHHHHHHH-HHHH------TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGG--------
T ss_pred CHHHHHHHHHHHHHHHHHHH-HHHh------cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCC--------
Confidence 11111111111112222222 2221 379999999765544 68899999999988766652100
Q ss_pred hccccccccccCCCCCccccCCCCCCCCCCCCCccccCccHHHHHHHHHHhhcCCceE---------------EEcChhh
Q 045029 158 HDEENTTITELKDSDAVLEVPGLVNSVPAKVWPSVVFNKEWAEVLNQQARTFRGTKGI---------------MVNTFEE 222 (485)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~s~~~ 222 (485)
+.+ ...+...+...+..+....+..+...|+ +.+....
T Consensus 132 --------------------~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~ 184 (404)
T 3h4t_A 132 --------------------EQS-------QAERDMYNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPV 184 (404)
T ss_dssp --------------------GSC-------HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTT
T ss_pred --------------------hhH-------HHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcc
Confidence 000 0000000001111222222222111111 1111111
Q ss_pred hhHHHHHHhhCCCCCCCCeEEeccccCCCCCCCCCCCCCCCChhhHhhhhccCCCCcEEEEeecCcccCCHHHHHHHHHH
Q 045029 223 LESHAVRSFSDGKSKTPPLYPMGPILNIKGENYDLGEGGADKKADIMAWLDDQPESSVVFLCFGSWGSFGEDQVKEIACA 302 (485)
Q Consensus 223 le~~~~~~~~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vyvs~GS~~~~~~~~~~~~~~a 302 (485)
+ ...++..+++.++|+++.... ..+++++.+|++.. +++|||+|||+.. ..+.+..++++
T Consensus 185 l--------~p~~~~~~~~~~~G~~~~~~~---------~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~a 244 (404)
T 3h4t_A 185 L--------SPLRPTDLGTVQTGAWILPDQ---------RPLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEA 244 (404)
T ss_dssp T--------SCCCTTCCSCCBCCCCCCCCC---------CCCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHH
T ss_pred e--------eCCCCCCCCeEEeCccccCCC---------CCCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHH
Confidence 1 111112345788998754322 45678899999864 4699999999876 66778889999
Q ss_pred HHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchhhhhccCCccccccccCchhhHHHHh
Q 045029 303 LEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQIAVLAHPAIGGFVSHCGWNSTLESIW 382 (485)
Q Consensus 303 l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~vL~h~~~~~~itHgG~~s~~eal~ 382 (485)
+++.++++||+.++.... .... ++|+.+++|+||.++|+++++ ||||||+||++||++
T Consensus 245 l~~~~~~vv~~~g~~~~~------------~~~~--------~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~ 302 (404)
T 3h4t_A 245 VRAQGRRVVLSSGWAGLG------------RIDE--------GDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTR 302 (404)
T ss_dssp HHHTTCCEEEECTTTTCC------------CSSC--------CTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHH
T ss_pred HHhCCCEEEEEeCCcccc------------cccC--------CCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHH
Confidence 999999999998865210 0011 357899999999999988777 999999999999999
Q ss_pred hCCcEeeccccccchhhHHHHHHhhceeEEeeecccccccccCCcccCHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 045029 383 FGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYRNDIMIENPTVVNAEVIERGIRCLMEHNSEMRKRVKEMSEKAR 460 (485)
Q Consensus 383 ~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~r~~a~~~~~~~~ 460 (485)
+|||+|++|+++||+.||.++++. |+|+.+... .++.++|.++|+++++ ++|+++++++++.++
T Consensus 303 ~GvP~v~~p~~~dQ~~na~~~~~~-G~g~~l~~~-----------~~~~~~l~~ai~~ll~--~~~~~~~~~~~~~~~ 366 (404)
T 3h4t_A 303 AGAPQVVVPQKADQPYYAGRVADL-GVGVAHDGP-----------TPTVESLSAALATALT--PGIRARAAAVAGTIR 366 (404)
T ss_dssp HTCCEEECCCSTTHHHHHHHHHHH-TSEEECSSS-----------SCCHHHHHHHHHHHTS--HHHHHHHHHHHTTCC
T ss_pred cCCCEEEcCCcccHHHHHHHHHHC-CCEeccCcC-----------CCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHh
Confidence 999999999999999999999886 999998754 6899999999999997 789999999988754
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=1.7e-37 Score=310.95 Aligned_cols=374 Identities=14% Similarity=0.196 Sum_probs=243.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcCCCCCchhhhhhhhhhccCCCCCeEEEECCCCCCCCCC---
Q 045029 3 KAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMKLPHDNTVATYTQSLAASNLSSRIKFINLPDDQPDKES--- 79 (485)
Q Consensus 3 ~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~--- 79 (485)
++||+|++.++.||++|++.||++|+++||+ |++++++ .+.+.+. ..++.|..++........
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~--V~v~~~~--------~~~~~~~----~~G~~~~~~~~~~~~~~~~~~ 85 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRRGHR--VSYVTAG--------GFAEPVR----AAGATVVPYQSEIIDADAAEV 85 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHTTCE--EEEEECG--------GGHHHHH----HTTCEEEECCCSTTTCCHHHH
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHCCCE--EEEEeCH--------HHHHHHH----hcCCEEEeccccccccccchh
Confidence 4699999999999999999999999999999 7799876 5555554 457889888754211100
Q ss_pred ---CChHhHHHH-HHHhhhhhHHHHHHhhhhcCCCCCCccEEEEC-CCchhHHHHHHHcCCCeEEEechhHHHHHHHHHH
Q 045029 80 ---TPPKRFFGH-FVESKKPHVKEVVANLTDESPDSPRLAGFVLD-MFCTCMIEVADEFKVPSYLFFTSGAAFLGFMLRV 154 (485)
Q Consensus 80 ---~~~~~~~~~-~~~~~~~~~~~~l~~l~~~~~~~~~~D~vI~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 154 (485)
......+.. +.......+..+ .++++. .+||+||+| ....++..+|+++|||++.+.+....... +...
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l-~~~l~~----~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~ 159 (415)
T 3rsc_A 86 FGSDDLGVRPHLMYLRENVSVLRAT-AEALDG----DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH-YSFS 159 (415)
T ss_dssp HHSSSSCHHHHHHHHHHHHHHHHHH-HHHHSS----SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS-CCHH
T ss_pred hccccHHHHHHHHHHHHHHHHHHHH-HHHHhc----cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc-cccc
Confidence 011112222 233333233333 333433 599999999 77888889999999999987643321000 0000
Q ss_pred hhhhccccccccccCCCCCccccCCCCCCCCCCCCCccccCccHHHHHHHHHHhh----------cCC-ceEEEcChhhh
Q 045029 155 QALHDEENTTITELKDSDAVLEVPGLVNSVPAKVWPSVVFNKEWAEVLNQQARTF----------RGT-KGIMVNTFEEL 223 (485)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----------~~~-~~~~~~s~~~l 223 (485)
+.. .+... . ..+. .. ......+.+..... ... ...+......+
T Consensus 160 ~~~-------------------~~~~~-~----~~p~-~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~ 213 (415)
T 3rsc_A 160 QDM-------------------VTLAG-T----IDPL-DL-PVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAF 213 (415)
T ss_dssp HHH-------------------HHHHT-C----CCGG-GC-HHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTT
T ss_pred ccc-------------------ccccc-c----CChh-hH-HHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCccc
Confidence 000 00000 0 0000 00 00011111111111 001 22232222222
Q ss_pred hHHHHHHhhCCCCCCCCeEEeccccCCCCCCCCCCCCCCCChhhHhhhhccCCCCcEEEEeecCcccCCHHHHHHHHHHH
Q 045029 224 ESHAVRSFSDGKSKTPPLYPMGPILNIKGENYDLGEGGADKKADIMAWLDDQPESSVVFLCFGSWGSFGEDQVKEIACAL 303 (485)
Q Consensus 224 e~~~~~~~~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vyvs~GS~~~~~~~~~~~~~~al 303 (485)
+.. ... ...++.++||++.... +..+|+...+++++|||++||......+.+..+++++
T Consensus 214 ~~~-----~~~--~~~~~~~vGp~~~~~~--------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al 272 (415)
T 3rsc_A 214 QIA-----GDT--FDDRFVFVGPCFDDRR--------------FLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAF 272 (415)
T ss_dssp STT-----GGG--CCTTEEECCCCCCCCG--------------GGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHH
T ss_pred CCC-----ccc--CCCceEEeCCCCCCcc--------------cCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHH
Confidence 211 110 2334889998764221 2234554445567999999998776777888999999
Q ss_pred HhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchhhhhccCCccccccccCchhhHHHHhh
Q 045029 304 EQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQIAVLAHPAIGGFVSHCGWNSTLESIWF 383 (485)
Q Consensus 304 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~vL~h~~~~~~itHgG~~s~~eal~~ 383 (485)
++.+.+++|.++..... +. ....++|+.+.+|+||.++|+++++ ||||||+||++||+++
T Consensus 273 ~~~~~~~v~~~g~~~~~-----------------~~-l~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~ 332 (415)
T 3rsc_A 273 DGQPWHVVMTLGGQVDP-----------------AA-LGDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYW 332 (415)
T ss_dssp TTSSCEEEEECTTTSCG-----------------GG-GCCCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHT
T ss_pred hcCCcEEEEEeCCCCCh-----------------HH-hcCCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHh
Confidence 99899999998864200 01 1112357899999999999999988 9999999999999999
Q ss_pred CCcEeeccccccchhhHHHHHHhhceeEEeeecccccccccCCcccCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHhh
Q 045029 384 GVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYRNDIMIENPTVVNAEVIERGIRCLMEHNSEMRKRVKEMSEKARKAL 463 (485)
Q Consensus 384 GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~r~~a~~~~~~~~~~~ 463 (485)
|+|+|++|+..||+.||.++++. |+|+.+..+ .++.++|.++|+++++ |++++++++++++.+.+.
T Consensus 333 G~P~v~~p~~~~q~~~a~~l~~~-g~g~~~~~~-----------~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~- 398 (415)
T 3rsc_A 333 GRPLVVVPQSFDVQPMARRVDQL-GLGAVLPGE-----------KADGDTLLAAVGAVAA-DPALLARVEAMRGHVRRA- 398 (415)
T ss_dssp TCCEEECCCSGGGHHHHHHHHHH-TCEEECCGG-----------GCCHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHS-
T ss_pred CCCEEEeCCcchHHHHHHHHHHc-CCEEEcccC-----------CCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHhc-
Confidence 99999999999999999999886 999988755 6899999999999999 799999999999998763
Q ss_pred hcCCChHHHHHHHHHHHh
Q 045029 464 SDGGSSFSSMGRLIDDFL 481 (485)
Q Consensus 464 ~~gg~~~~~~~~~~~~~~ 481 (485)
++..+.+ +.|.+++
T Consensus 399 ---~~~~~~~-~~i~~~~ 412 (415)
T 3rsc_A 399 ---GGAARAA-DAVEAYL 412 (415)
T ss_dssp ---CHHHHHH-HHHHHHH
T ss_pred ---CHHHHHH-HHHHHHh
Confidence 4434444 4444443
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=3.7e-37 Score=307.07 Aligned_cols=376 Identities=15% Similarity=0.202 Sum_probs=244.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcCCCCCchhhhhhhhhhccCCCCCeEEEECCCCCCCC---
Q 045029 1 MKKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMKLPHDNTVATYTQSLAASNLSSRIKFINLPDDQPDK--- 77 (485)
Q Consensus 1 m~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~--- 77 (485)
|.++||+|++.++.||++|++.||++|+++||+ |++++++ .+.+.+. ..++.|..++......
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~Ghe--V~v~~~~--------~~~~~~~----~~G~~~~~~~~~~~~~~~~ 67 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHR--ITYVTTP--------LFADEVK----AAGAEVVLYKSEFDTFHVP 67 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTTCE--EEEEECH--------HHHHHHH----HTTCEEEECCCGGGTSSSS
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCCCE--EEEEcCH--------HHHHHHH----HcCCEEEeccccccccccc
Confidence 666799999999999999999999999999999 7788876 5666555 4578888887532100
Q ss_pred --CC-CChHhHHHH-HHHhhhhhHHHHHHhhhhcCCCCCCccEEEEC-CCchhHHHHHHHcCCCeEEEechhHHHHHHHH
Q 045029 78 --ES-TPPKRFFGH-FVESKKPHVKEVVANLTDESPDSPRLAGFVLD-MFCTCMIEVADEFKVPSYLFFTSGAAFLGFML 152 (485)
Q Consensus 78 --~~-~~~~~~~~~-~~~~~~~~~~~~l~~l~~~~~~~~~~D~vI~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 152 (485)
.. .+....+.. +.......+..+ .++++. .+||+||+| .+..++..+|+++|||++.+.+........ .
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~l~~----~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~-~ 141 (402)
T 3ia7_A 68 EVVKQEDAETQLHLVYVRENVAILRAA-EEALGD----NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHY-S 141 (402)
T ss_dssp SSSCCTTHHHHHHHHHHHHHHHHHHHH-HHHHTT----CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTB-C
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHH-HHHHhc----cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccc-c
Confidence 01 123333333 333333333333 333333 599999999 778888899999999998876433210000 0
Q ss_pred HHhhhhccccccccccCCCCCccccCCCCCCCCCCCCCccccCccHHHHHHHHHHhh----------cCC-ceEEEcChh
Q 045029 153 RVQALHDEENTTITELKDSDAVLEVPGLVNSVPAKVWPSVVFNKEWAEVLNQQARTF----------RGT-KGIMVNTFE 221 (485)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----------~~~-~~~~~~s~~ 221 (485)
..+... +... .. .+... ......+.+..... ... ...+...-.
T Consensus 142 ~~~~~~-------------------~~~~-~~----~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~ 195 (402)
T 3ia7_A 142 LFKELW-------------------KSNG-QR----HPADV--EAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPK 195 (402)
T ss_dssp HHHHHH-------------------HHHT-CC----CGGGS--HHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCG
T ss_pred cccccc-------------------cccc-cc----ChhhH--HHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCh
Confidence 000000 0000 00 00000 00011111111111 001 222222222
Q ss_pred hhhHHHHHHhhCCCCCCCCeEEeccccCCCCCCCCCCCCCCCChhhHhhhhccCCCCcEEEEeecCcccCCHHHHHHHHH
Q 045029 222 ELESHAVRSFSDGKSKTPPLYPMGPILNIKGENYDLGEGGADKKADIMAWLDDQPESSVVFLCFGSWGSFGEDQVKEIAC 301 (485)
Q Consensus 222 ~le~~~~~~~~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vyvs~GS~~~~~~~~~~~~~~ 301 (485)
.++.. ... ...++.++||++.... +...|+...+++++|||++||......+.+..+++
T Consensus 196 ~~~~~-----~~~--~~~~~~~vGp~~~~~~--------------~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~ 254 (402)
T 3ia7_A 196 SFQPF-----AET--FDERFAFVGPTLTGRD--------------GQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQ 254 (402)
T ss_dssp GGSTT-----GGG--CCTTEEECCCCCCC------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHH
T ss_pred HhCCc-----ccc--CCCCeEEeCCCCCCcc--------------cCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHH
Confidence 22211 110 2344899998764321 12335444445679999999998777778889999
Q ss_pred HHHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchhhhhccCCccccccccCchhhHHHH
Q 045029 302 ALEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQIAVLAHPAIGGFVSHCGWNSTLESI 381 (485)
Q Consensus 302 al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~vL~h~~~~~~itHgG~~s~~eal 381 (485)
+++..+.+++|.++..... +. ..+.++|+.+.+|+||.++|+++++ ||||||+||++||+
T Consensus 255 ~~~~~~~~~~~~~g~~~~~-----------------~~-~~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~ 314 (402)
T 3ia7_A 255 AFADTPWHVVMAIGGFLDP-----------------AV-LGPLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAF 314 (402)
T ss_dssp HHTTSSCEEEEECCTTSCG-----------------GG-GCSCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHH
T ss_pred HHhcCCcEEEEEeCCcCCh-----------------hh-hCCCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHH
Confidence 9999899999988764200 11 1112367899999999999999988 99999999999999
Q ss_pred hhCCcEeeccc-cccchhhHHHHHHhhceeEEeeecccccccccCCcccCHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 045029 382 WFGVPIATWPM-YAEQQFNAFELVVELGLAVEIKMDYRNDIMIENPTVVNAEVIERGIRCLMEHNSEMRKRVKEMSEKAR 460 (485)
Q Consensus 382 ~~GvP~v~~P~-~~DQ~~na~r~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~r~~a~~~~~~~~ 460 (485)
++|+|+|++|. ..||+.||.++++. |+|+.+..+ .++.++|.++|+++++ |++++++++++++.+.
T Consensus 315 ~~G~P~v~~p~~~~~q~~~a~~~~~~-g~g~~~~~~-----------~~~~~~l~~~~~~ll~-~~~~~~~~~~~~~~~~ 381 (402)
T 3ia7_A 315 AAGVPLVLVPHFATEAAPSAERVIEL-GLGSVLRPD-----------QLEPASIREAVERLAA-DSAVRERVRRMQRDIL 381 (402)
T ss_dssp HTTCCEEECGGGCGGGHHHHHHHHHT-TSEEECCGG-----------GCSHHHHHHHHHHHHH-CHHHHHHHHHHHHHHH
T ss_pred HhCCCEEEeCCCcccHHHHHHHHHHc-CCEEEccCC-----------CCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHh
Confidence 99999999999 99999999998886 999988754 6899999999999999 7999999999998876
Q ss_pred HhhhcCCChHHHHHHHHHHHh
Q 045029 461 KALSDGGSSFSSMGRLIDDFL 481 (485)
Q Consensus 461 ~~~~~gg~~~~~~~~~~~~~~ 481 (485)
+ ++++...+ +.|.+++
T Consensus 382 ~----~~~~~~~~-~~i~~~~ 397 (402)
T 3ia7_A 382 S----SGGPARAA-DEVEAYL 397 (402)
T ss_dssp T----SCHHHHHH-HHHHHHH
T ss_pred h----CChHHHHH-HHHHHHH
Confidence 5 34444444 4444444
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=9.5e-37 Score=307.80 Aligned_cols=372 Identities=14% Similarity=0.144 Sum_probs=231.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcCCCCCchhhhhhhhhhccCCCCCeEEEECCCCCCCCCC--
Q 045029 2 KKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMKLPHDNTVATYTQSLAASNLSSRIKFINLPDDQPDKES-- 79 (485)
Q Consensus 2 ~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~-- 79 (485)
+.+||+|++.++.||++|+++||++|+++||+ |++++++ .+.+.+. ..|+.|+.++......+.
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~Ghe--V~~~~~~--------~~~~~v~----~~G~~~~~i~~~~~~~~~~~ 84 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHE--VRVVASP--------ALTEDIT----AAGLTAVPVGTDVDLVDFMT 84 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCE--EEEEECG--------GGHHHHH----TTTCCEEECSCCCCHHHHHH
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHCCCe--EEEEeCc--------hhHHHHH----hCCCceeecCCccchHHHhh
Confidence 35799999999999999999999999999999 7799876 4555554 568899988764210000
Q ss_pred ------------CC-----hH----hHHHH----HHHhhh-----h-hHHHHHHhhhhcCCCCCCccEEEECCCchhHHH
Q 045029 80 ------------TP-----PK----RFFGH----FVESKK-----P-HVKEVVANLTDESPDSPRLAGFVLDMFCTCMIE 128 (485)
Q Consensus 80 ------------~~-----~~----~~~~~----~~~~~~-----~-~~~~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~ 128 (485)
.+ .. ..+.. +..... . .+.++++.+.+ .+||+||+|.+..++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~pDlVv~d~~~~~~~~ 159 (441)
T 2yjn_A 85 HAGHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK-----WRPDLVIWEPLTFAAPI 159 (441)
T ss_dssp HTTHHHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH-----HCCSEEEECTTCTHHHH
T ss_pred hhhcccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh-----cCCCEEEecCcchhHHH
Confidence 00 10 11111 111111 1 33444333322 38999999998788899
Q ss_pred HHHHcCCCeEEEechhHHHHHHHHHHhhhhccccccccccCCCCCccccCCCCCCCCCCCCCccccCccHHHHHHHHHHh
Q 045029 129 VADEFKVPSYLFFTSGAAFLGFMLRVQALHDEENTTITELKDSDAVLEVPGLVNSVPAKVWPSVVFNKEWAEVLNQQART 208 (485)
Q Consensus 129 ~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 208 (485)
+|+++|||++.+...+.........+.... .+.|.. .+.. ...+.+......
T Consensus 160 aA~~lgiP~v~~~~~~~~~~~~~~~~~~~~----------------~~~~~~-------~~~~-----~~~~~l~~~~~~ 211 (441)
T 2yjn_A 160 AAAVTGTPHARLLWGPDITTRARQNFLGLL----------------PDQPEE-------HRED-----PLAEWLTWTLEK 211 (441)
T ss_dssp HHHHHTCCEEEECSSCCHHHHHHHHHHHHG----------------GGSCTT-------TCCC-----HHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEecCCCcchhhhhhhhhhc----------------cccccc-------cccc-----hHHHHHHHHHHH
Confidence 999999999998654432111100000000 000100 0000 011112222221
Q ss_pred hcC---------CceEEEcChhhhhHHHHHHhhCCCCCCCCeEEeccccCCCCCCCCCCCCCCCChhhHhhhhccCCCCc
Q 045029 209 FRG---------TKGIMVNTFEELESHAVRSFSDGKSKTPPLYPMGPILNIKGENYDLGEGGADKKADIMAWLDDQPESS 279 (485)
Q Consensus 209 ~~~---------~~~~~~~s~~~le~~~~~~~~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 279 (485)
+.. ....+.+....++. .. .++. ..+++.. ...+.++.+|++..++++
T Consensus 212 ~g~~~~~~~~~~~~~~l~~~~~~~~~-------~~--~~~~-~~~~~~~-------------~~~~~~~~~~l~~~~~~~ 268 (441)
T 2yjn_A 212 YGGPAFDEEVVVGQWTIDPAPAAIRL-------DT--GLKT-VGMRYVD-------------YNGPSVVPEWLHDEPERR 268 (441)
T ss_dssp TTCCCCCGGGTSCSSEEECSCGGGSC-------CC--CCCE-EECCCCC-------------CCSSCCCCGGGSSCCSSC
T ss_pred cCCCCCCccccCCCeEEEecCccccC-------CC--CCCC-CceeeeC-------------CCCCcccchHhhcCCCCC
Confidence 111 11112111111110 00 1110 1222210 011234668998666678
Q ss_pred EEEEeecCcccC---CHHHHHHHHHHHHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecch
Q 045029 280 VVFLCFGSWGSF---GEDQVKEIACALEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQ 356 (485)
Q Consensus 280 ~vyvs~GS~~~~---~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq 356 (485)
+|||++||.... ..+.+..++++++..++++||+.++.. .+.+. .+ ++|+.+++|+||
T Consensus 269 ~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~----------~~~l~-~~--------~~~v~~~~~~~~ 329 (441)
T 2yjn_A 269 RVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQ----------LEGVA-NI--------PDNVRTVGFVPM 329 (441)
T ss_dssp EEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTT----------TSSCS-SC--------CSSEEECCSCCH
T ss_pred EEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcc----------hhhhc-cC--------CCCEEEecCCCH
Confidence 999999998753 335577799999989999999987542 01111 12 356889999999
Q ss_pred hhhhccCCccccccccCchhhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEeeecccccccccCCcccCHHHHHH
Q 045029 357 IAVLAHPAIGGFVSHCGWNSTLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYRNDIMIENPTVVNAEVIER 436 (485)
Q Consensus 357 ~~vL~h~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~l~~ 436 (485)
.++|+++++ ||||||+||++||+++|||+|++|+..||+.||+++++. |+|+.++.+ .++.++|.+
T Consensus 330 ~~ll~~ad~--~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~~-----------~~~~~~l~~ 395 (441)
T 2yjn_A 330 HALLPTCAA--TVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEF-GAGIALPVP-----------ELTPDQLRE 395 (441)
T ss_dssp HHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH-TSEEECCTT-----------TCCHHHHHH
T ss_pred HHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHc-CCEEEcccc-----------cCCHHHHHH
Confidence 999988777 999999999999999999999999999999999998886 999988754 689999999
Q ss_pred HHHHHhcCChHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhh
Q 045029 437 GIRCLMEHNSEMRKRVKEMSEKARKALSDGGSSFSSMGRLIDDFLD 482 (485)
Q Consensus 437 av~~vl~~~~~~r~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~ 482 (485)
+|+++++ |++++++++++++.+++. + +. ..+.+.|.++.+
T Consensus 396 ~i~~ll~-~~~~~~~~~~~~~~~~~~---~-~~-~~~~~~i~~~~~ 435 (441)
T 2yjn_A 396 SVKRVLD-DPAHRAGAARMRDDMLAE---P-SP-AEVVGICEELAA 435 (441)
T ss_dssp HHHHHHH-CHHHHHHHHHHHHHHHTS---C-CH-HHHHHHHHHHHH
T ss_pred HHHHHhc-CHHHHHHHHHHHHHHHcC---C-CH-HHHHHHHHHHHH
Confidence 9999999 799999999999988753 3 33 344455555543
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.9e-36 Score=304.79 Aligned_cols=359 Identities=17% Similarity=0.208 Sum_probs=236.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcCCCCCchhhhhhhhhhccCCCCCeEEEECCCCCCCCCC-
Q 045029 1 MKKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMKLPHDNTVATYTQSLAASNLSSRIKFINLPDDQPDKES- 79 (485)
Q Consensus 1 m~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~- 79 (485)
|+++||++++.++.||++|++.|+++|+++||+ |++++++ .+.+.+. ..++.++.++... +...
T Consensus 5 m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~--V~~~~~~--------~~~~~~~----~~g~~~~~~~~~~-~~~~~ 69 (430)
T 2iyf_A 5 TTPAHIAMFSIAAHGHVNPSLEVIRELVARGHR--VTYAIPP--------VFADKVA----ATGPRPVLYHSTL-PGPDA 69 (430)
T ss_dssp ---CEEEEECCSCHHHHGGGHHHHHHHHHTTCE--EEEEECG--------GGHHHHH----TTSCEEEECCCCS-CCTTS
T ss_pred cccceEEEEeCCCCccccchHHHHHHHHHCCCe--EEEEeCH--------HHHHHHH----hCCCEEEEcCCcC-ccccc
Confidence 444699999999999999999999999999999 7788876 3444443 4578888887642 1111
Q ss_pred ------CChHhHHHHHHHhhhhhHHHHHHhhhhcCCCCCCccEEEECCCchhHHHHHHHcCCCeEEEechhHHHHHHHHH
Q 045029 80 ------TPPKRFFGHFVESKKPHVKEVVANLTDESPDSPRLAGFVLDMFCTCMIEVADEFKVPSYLFFTSGAAFLGFMLR 153 (485)
Q Consensus 80 ------~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 153 (485)
.+....+..+...+...+.. +.++++. .+||+||+|.+..++..+|+++|||++.+++....... +..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~l~~----~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~-~~~ 143 (430)
T 2iyf_A 70 DPEAWGSTLLDNVEPFLNDAIQALPQ-LADAYAD----DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKG-YEE 143 (430)
T ss_dssp CGGGGCSSHHHHHHHHHHHHHHHHHH-HHHHHTT----SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTT-HHH
T ss_pred cccccchhhHHHHHHHHHHHHHHHHH-HHHHhhc----cCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccc-ccc
Confidence 12222222222222222333 3344443 58999999988778889999999999998765431000 000
Q ss_pred Hh--hhhccccccccccCCCCCccccCCCCCCCCCCCCCccccCccHHHHHHHHHH----------hhcCCceEEEcChh
Q 045029 154 VQ--ALHDEENTTITELKDSDAVLEVPGLVNSVPAKVWPSVVFNKEWAEVLNQQAR----------TFRGTKGIMVNTFE 221 (485)
Q Consensus 154 ~~--~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~s~~ 221 (485)
.. ..... . ...+++ ......+.+... .......+++++..
T Consensus 144 ~~~~~~~~~-------~------~~~~~~---------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~ 195 (430)
T 2iyf_A 144 EVAEPMWRE-------P------RQTERG---------------RAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPK 195 (430)
T ss_dssp HTHHHHHHH-------H------HHSHHH---------------HHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCG
T ss_pred ccccchhhh-------h------ccchHH---------------HHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcH
Confidence 00 00000 0 000000 000000111111 11134567777776
Q ss_pred hhhHHHHHHhhCCCCCCCC-eEEeccccCCCCCCCCCCCCCCCChhhHhhhhccCCCCcEEEEeecCcccCCHHHHHHHH
Q 045029 222 ELESHAVRSFSDGKSKTPP-LYPMGPILNIKGENYDLGEGGADKKADIMAWLDDQPESSVVFLCFGSWGSFGEDQVKEIA 300 (485)
Q Consensus 222 ~le~~~~~~~~~~~~~~p~-v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vyvs~GS~~~~~~~~~~~~~ 300 (485)
.++... .. ..++ ++++||.+.... +..+|++..+++++||+++||......+.+.+++
T Consensus 196 ~~~~~~----~~---~~~~~v~~vG~~~~~~~--------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~ 254 (430)
T 2iyf_A 196 ALQPHA----DR---VDEDVYTFVGACQGDRA--------------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECV 254 (430)
T ss_dssp GGSTTG----GG---SCTTTEEECCCCC-------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHH
T ss_pred HhCCCc----cc---CCCccEEEeCCcCCCCC--------------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHH
Confidence 665431 11 3346 999998654221 0124554444567999999998855667788899
Q ss_pred HHHHhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchhhhhccCCccccccccCchhhHH
Q 045029 301 CALEQS-GHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQIAVLAHPAIGGFVSHCGWNSTLE 379 (485)
Q Consensus 301 ~al~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~vL~h~~~~~~itHgG~~s~~e 379 (485)
++++.. +.+++|.+|..... +.+ +..++|+.+.+|+||.++|+++++ ||||||+||++|
T Consensus 255 ~~l~~~~~~~~~~~~G~~~~~-----------------~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~E 314 (430)
T 2iyf_A 255 RAFGNLPGWHLVLQIGRKVTP-----------------AEL-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQE 314 (430)
T ss_dssp HHHTTCTTEEEEEECC---CG-----------------GGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHH
T ss_pred HHHhcCCCeEEEEEeCCCCCh-----------------HHh-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHH
Confidence 999885 88999988764200 000 112357889999999999999998 999999999999
Q ss_pred HHhhCCcEeeccccccchhhHHHHHHhhceeEEeeecccccccccCCcccCHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 045029 380 SIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYRNDIMIENPTVVNAEVIERGIRCLMEHNSEMRKRVKEMSEKA 459 (485)
Q Consensus 380 al~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~r~~a~~~~~~~ 459 (485)
|+++|+|+|++|..+||..||+++++. |+|+.+..+ .++.++|+++|+++++ |++++++++++++.+
T Consensus 315 a~~~G~P~i~~p~~~~q~~~a~~~~~~-g~g~~~~~~-----------~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~ 381 (430)
T 2iyf_A 315 GLATATPMIAVPQAVDQFGNADMLQGL-GVARKLATE-----------EATADLLRETALALVD-DPEVARRLRRIQAEM 381 (430)
T ss_dssp HHHTTCCEEECCCSHHHHHHHHHHHHT-TSEEECCCC------------CCHHHHHHHHHHHHH-CHHHHHHHHHHHHHH
T ss_pred HHHhCCCEEECCCccchHHHHHHHHHc-CCEEEcCCC-----------CCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHH
Confidence 999999999999999999999998885 999988654 6799999999999999 789999999999888
Q ss_pred HHh
Q 045029 460 RKA 462 (485)
Q Consensus 460 ~~~ 462 (485)
++.
T Consensus 382 ~~~ 384 (430)
T 2iyf_A 382 AQE 384 (430)
T ss_dssp HHH
T ss_pred Hhc
Confidence 764
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=3.9e-36 Score=297.95 Aligned_cols=337 Identities=13% Similarity=0.126 Sum_probs=227.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcCCCCCchhhhhhhhhhccCCCCCeEEEECCCCC---------
Q 045029 4 AQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMKLPHDNTVATYTQSLAASNLSSRIKFINLPDDQ--------- 74 (485)
Q Consensus 4 ~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~--------- 74 (485)
+||++++.++.||++|+++|+++|+++||+ |++++++ .+.+.+. ..++.++.++...
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~--V~~~~~~--------~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~ 66 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQ--VVMAANQ--------DMGPVVT----GVGLPAVATTDLPIRHFITTDR 66 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCE--EEEEECG--------GGHHHHH----HTTCCEEESCSSCHHHHHHBCT
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCE--EEEEeCH--------HHHHHHH----hCCCEEEEeCCcchHHHHhhhc
Confidence 479999999999999999999999999999 7788876 3333333 3477888776532
Q ss_pred --CCCCC-CC--hHhHH-HH-HHHhhhhhHHHHHHhhhhcCCCCCCccEEEECCCchhHHHHHHHcCCCeEEEechhHHH
Q 045029 75 --PDKES-TP--PKRFF-GH-FVESKKPHVKEVVANLTDESPDSPRLAGFVLDMFCTCMIEVADEFKVPSYLFFTSGAAF 147 (485)
Q Consensus 75 --~~~~~-~~--~~~~~-~~-~~~~~~~~~~~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~ 147 (485)
.+... .. ....+ .. +.......+.++.+.+ ++ .+||+||+|.+..++..+|+++|||++.++..+..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~----~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~- 140 (384)
T 2p6p_A 67 EGRPEAIPSDPVAQARFTGRWFARMAASSLPRMLDFS-RA----WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD- 140 (384)
T ss_dssp TSCBCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH----HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC-
T ss_pred ccCccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHH-hc----cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc-
Confidence 01001 00 01111 11 1111222233333333 32 38999999988888889999999999887532210
Q ss_pred HHHHHHHhhhhccccccccccCCCCCccccCCCCCCCCCCCCCccccCccHHHHHHHHHHhhc-----CCceEEEcChhh
Q 045029 148 LGFMLRVQALHDEENTTITELKDSDAVLEVPGLVNSVPAKVWPSVVFNKEWAEVLNQQARTFR-----GTKGIMVNTFEE 222 (485)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~s~~~ 222 (485)
... +. ......+.+...... ....+++++...
T Consensus 141 ---------------------------------~~~-----~~-----~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 177 (384)
T 2p6p_A 141 ---------------------------------ADG-----IH-----PGADAELRPELSELGLERLPAPDLFIDICPPS 177 (384)
T ss_dssp ---------------------------------CTT-----TH-----HHHHHHTHHHHHHTTCSSCCCCSEEEECSCGG
T ss_pred ---------------------------------cch-----hh-----HHHHHHHHHHHHHcCCCCCCCCCeEEEECCHH
Confidence 000 00 000011111111111 134456666555
Q ss_pred hhHHHHHHhhCCCCCC-CCeEEeccccCCCCCCCCCCCCCCCChhhHhhhhccCCCCcEEEEeecCcccC-----CHHHH
Q 045029 223 LESHAVRSFSDGKSKT-PPLYPMGPILNIKGENYDLGEGGADKKADIMAWLDDQPESSVVFLCFGSWGSF-----GEDQV 296 (485)
Q Consensus 223 le~~~~~~~~~~~~~~-p~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vyvs~GS~~~~-----~~~~~ 296 (485)
++... . .. .++.+++ . .. +.++.+|++..+++++|||++||.... +.+.+
T Consensus 178 ~~~~~-----~---~~~~~~~~~~-~---~~------------~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~ 233 (384)
T 2p6p_A 178 LRPAN-----A---APARMMRHVA-T---SR------------QCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFL 233 (384)
T ss_dssp GSCTT-----S---CCCEECCCCC-C---CC------------CCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTH
T ss_pred HCCCC-----C---CCCCceEecC-C---CC------------CCCCCchhhcCCCCCEEEEECCCCCccccccccHHHH
Confidence 54211 0 10 1122221 1 01 224567887655567999999998754 45678
Q ss_pred HHHHHHHHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchhhhhccCCccccccccCchh
Q 045029 297 KEIACALEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQIAVLAHPAIGGFVSHCGWNS 376 (485)
Q Consensus 297 ~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~vL~h~~~~~~itHgG~~s 376 (485)
..+++++++.+.+++|+.++.. .+.+ ...++|+.+ +|+||.++|+++++ ||||||+||
T Consensus 234 ~~~~~al~~~~~~~~~~~g~~~------------------~~~l-~~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t 291 (384)
T 2p6p_A 234 RGLAKDLVRWDVELIVAAPDTV------------------AEAL-RAEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVS 291 (384)
T ss_dssp HHHHHHHHTTTCEEEEECCHHH------------------HHHH-HHHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTH
T ss_pred HHHHHHHhcCCcEEEEEeCCCC------------------HHhh-CCCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHH
Confidence 8899999999999999876431 0111 134578999 99999999988777 999999999
Q ss_pred hHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEeeecccccccccCCcccCHHHHHHHHHHHhcCChHHHHHHHHHH
Q 045029 377 TLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYRNDIMIENPTVVNAEVIERGIRCLMEHNSEMRKRVKEMS 456 (485)
Q Consensus 377 ~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~r~~a~~~~ 456 (485)
++||+++|+|+|++|...||+.||.++++. |+|+.++.+ .++.++|.++|+++++ |+++|+++++++
T Consensus 292 ~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~-g~g~~~~~~-----------~~~~~~l~~~i~~ll~-~~~~~~~~~~~~ 358 (384)
T 2p6p_A 292 TLTGLSAGVPQLLIPKGSVLEAPARRVADY-GAAIALLPG-----------EDSTEAIADSCQELQA-KDTYARRAQDLS 358 (384)
T ss_dssp HHHHHHTTCCEEECCCSHHHHHHHHHHHHH-TSEEECCTT-----------CCCHHHHHHHHHHHHH-CHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEccCcccchHHHHHHHHC-CCeEecCcC-----------CCCHHHHHHHHHHHHc-CHHHHHHHHHHH
Confidence 999999999999999999999999998875 999988643 5799999999999999 799999999999
Q ss_pred HHHHHh
Q 045029 457 EKARKA 462 (485)
Q Consensus 457 ~~~~~~ 462 (485)
+.+++.
T Consensus 359 ~~~~~~ 364 (384)
T 2p6p_A 359 REISGM 364 (384)
T ss_dssp HHHHTS
T ss_pred HHHHhC
Confidence 998764
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=8.8e-34 Score=282.37 Aligned_cols=340 Identities=14% Similarity=0.129 Sum_probs=208.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcCCCCCchhhhhhhhhhccCCCCCeEEEECCCCC--------
Q 045029 3 KAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMKLPHDNTVATYTQSLAASNLSSRIKFINLPDDQ-------- 74 (485)
Q Consensus 3 ~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~-------- 74 (485)
++||+|++.++.||++|++.|+++|+++||+ |++++++ .+.+.+. ..++.+..++...
T Consensus 15 ~MrIl~~~~~~~gh~~~~~~La~~L~~~Ghe--V~v~~~~--------~~~~~~~----~~G~~~~~~~~~~~~~~~~~~ 80 (398)
T 4fzr_A 15 HMRILVIAGCSEGFVMPLVPLSWALRAAGHE--VLVAASE--------NMGPTVT----GAGLPFAPTCPSLDMPEVLSW 80 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCE--EEEEEEG--------GGHHHHH----HTTCCEEEEESSCCHHHHHSB
T ss_pred ceEEEEEcCCCcchHHHHHHHHHHHHHCCCE--EEEEcCH--------HHHHHHH----hCCCeeEecCCccchHhhhhh
Confidence 5799999999999999999999999999999 6688766 4555554 4567777765311
Q ss_pred ----CCCCCC-ChHh---HHHHHH-HhhhhhHHHHHHhhhhcCCCCCCccEEEECCCchhHHHHHHHcCCCeEEEechhH
Q 045029 75 ----PDKEST-PPKR---FFGHFV-ESKKPHVKEVVANLTDESPDSPRLAGFVLDMFCTCMIEVADEFKVPSYLFFTSGA 145 (485)
Q Consensus 75 ----~~~~~~-~~~~---~~~~~~-~~~~~~~~~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~ 145 (485)
.+.... .... ....++ ......+.. +.++++. .+||+||+|....++..+|+++|||++.+.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~----~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~ 155 (398)
T 4fzr_A 81 DREGNRTTMPREEKPLLEHIGRGYGRLVLRMRDE-ALALAER----WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLA 155 (398)
T ss_dssp CTTSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH----HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSC
T ss_pred hccCcccccccchhhHHHHHHHHHHHHHHHHHHH-HHHHHHh----CCCCEEEECccccHHHHHHHhhCCCEEEeccCCC
Confidence 000000 1111 111111 111122222 3333333 4899999998878888999999999888654432
Q ss_pred HHHHHHHHHhhhhccccccccccCCCCCccccCCCCCCCCCCCCCccccCccHHHHHHHHHHhhc-----CCceEEEcCh
Q 045029 146 AFLGFMLRVQALHDEENTTITELKDSDAVLEVPGLVNSVPAKVWPSVVFNKEWAEVLNQQARTFR-----GTKGIMVNTF 220 (485)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~s~ 220 (485)
......... ...+......+. .....+....
T Consensus 156 ~~~~~~~~~--------------------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~ 191 (398)
T 4fzr_A 156 SPELIKSAG--------------------------------------------VGELAPELAELGLTDFPDPLLSIDVCP 191 (398)
T ss_dssp CCHHHHHHH--------------------------------------------HHHTHHHHHTTTCSSCCCCSEEEECSC
T ss_pred CchhhhHHH--------------------------------------------HHHHHHHHHHcCCCCCCCCCeEEEeCC
Confidence 100000000 000000000000 0011121111
Q ss_pred hhhhHHHHHHhhCCCCCCCCeEEeccccCCCCCCCCCCCCCCCChhhHhhhhccCCCCcEEEEeecCcccC--------C
Q 045029 221 EELESHAVRSFSDGKSKTPPLYPMGPILNIKGENYDLGEGGADKKADIMAWLDDQPESSVVFLCFGSWGSF--------G 292 (485)
Q Consensus 221 ~~le~~~~~~~~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vyvs~GS~~~~--------~ 292 (485)
..+.... .+....+... +.. ....++.+|+...+.+++|||++||.... .
T Consensus 192 ~~~~~~~----------~~~~~~~~~~-~~~-----------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~ 249 (398)
T 4fzr_A 192 PSMEAQP----------KPGTTKMRYV-PYN-----------GRNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGG 249 (398)
T ss_dssp GGGC--------------CCCEECCCC-CCC-----------CSSCCCCHHHHSCCSSCEEECC----------------
T ss_pred hhhCCCC----------CCCCCCeeee-CCC-----------CCCCCCchhhhcCCCCCEEEEEccCcccccccccccch
Confidence 2221110 0111111110 000 01234456776555567999999998643 3
Q ss_pred HHHHHHHHHHHHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchhhhhccCCcccccccc
Q 045029 293 EDQVKEIACALEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQIAVLAHPAIGGFVSHC 372 (485)
Q Consensus 293 ~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~vL~h~~~~~~itHg 372 (485)
.+.+..+++++++.+.++||+.++.. .+. + ...++|+.+.+|+|+.++|+++++ |||||
T Consensus 250 ~~~~~~~~~al~~~~~~~v~~~~~~~----------~~~----l-----~~~~~~v~~~~~~~~~~ll~~ad~--~v~~g 308 (398)
T 4fzr_A 250 LSLLQALSQELPKLGFEVVVAVSDKL----------AQT----L-----QPLPEGVLAAGQFPLSAIMPACDV--VVHHG 308 (398)
T ss_dssp CCSHHHHHHHGGGGTCEEEECCCC---------------------------CCTTEEEESCCCHHHHGGGCSE--EEECC
T ss_pred HHHHHHHHHHHHhCCCEEEEEeCCcc----------hhh----h-----ccCCCcEEEeCcCCHHHHHhhCCE--EEecC
Confidence 35588899999999999999887652 000 1 122367899999999999999888 99999
Q ss_pred CchhhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEeeecccccccccCCcccCHHHHHHHHHHHhcCChHHHHHH
Q 045029 373 GWNSTLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYRNDIMIENPTVVNAEVIERGIRCLMEHNSEMRKRV 452 (485)
Q Consensus 373 G~~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~r~~a 452 (485)
|.||++||+++|+|+|++|...||+.||.++++. |+|+.++.+ .++.+.|.++|+++++ |+++|+++
T Consensus 309 G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~-g~g~~~~~~-----------~~~~~~l~~ai~~ll~-~~~~~~~~ 375 (398)
T 4fzr_A 309 GHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAA-GAGVEVPWE-----------QAGVESVLAACARIRD-DSSYVGNA 375 (398)
T ss_dssp CHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHT-TSEEECC------------------CHHHHHHHHHH-CTHHHHHH
T ss_pred CHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHc-CCEEecCcc-----------cCCHHHHHHHHHHHHh-CHHHHHHH
Confidence 9999999999999999999999999999998886 999998754 6789999999999999 79999999
Q ss_pred HHHHHHHHH
Q 045029 453 KEMSEKARK 461 (485)
Q Consensus 453 ~~~~~~~~~ 461 (485)
++.++.+++
T Consensus 376 ~~~~~~~~~ 384 (398)
T 4fzr_A 376 RRLAAEMAT 384 (398)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHc
Confidence 999988765
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=9.4e-33 Score=274.89 Aligned_cols=349 Identities=17% Similarity=0.203 Sum_probs=221.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcCCCCCchhhhhhhhhhccCCCCCeEEEECCCCCCC------
Q 045029 3 KAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMKLPHDNTVATYTQSLAASNLSSRIKFINLPDDQPD------ 76 (485)
Q Consensus 3 ~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~------ 76 (485)
++||+|++.++.||++|++.|+++|+++||+ |+++++ . +.+.+. ..++.+..++.....
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~Ghe--V~v~~~--~-------~~~~~~----~~G~~~~~~~~~~~~~~~~~~ 84 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHD--VLIAVA--E-------HADRAA----AAGLEVVDVAPDYSAVKVFEQ 84 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCE--EEEEES--S-------CHHHHH----TTTCEEEESSTTCCHHHHHHH
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCCCE--EEEecc--c-------hHHHHH----hCCCeeEecCCccCHHHHhhh
Confidence 4699999999999999999999999999999 668875 1 233333 568889888753100
Q ss_pred --------------CCCCChHhHHHHHHHhhhhhHHHHHHhhhhcCCCCCCccEEEECCCchhHHHHHHHcCCCeEEEec
Q 045029 77 --------------KESTPPKRFFGHFVESKKPHVKEVVANLTDESPDSPRLAGFVLDMFCTCMIEVADEFKVPSYLFFT 142 (485)
Q Consensus 77 --------------~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~ 142 (485)
............+.......+..+.+.+ +. .+||+||+|....++..+|+++|||++....
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~----~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~ 159 (398)
T 3oti_A 85 VAKDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALV-DD----YRPDLVVYEQGATVGLLAADRAGVPAVQRNQ 159 (398)
T ss_dssp HHHHCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHH-HH----HCCSEEEEETTCHHHHHHHHHHTCCEEEECC
T ss_pred cccCCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHH-HH----cCCCEEEECchhhHHHHHHHHcCCCEEEEec
Confidence 0011111111112222223333333333 32 3899999998888888999999999887653
Q ss_pred hhHHHHHHHHHHhhhhccccccccccCCCCCccccCCCCCCCCCCCCCccccCccHHHHHHHHHHhhc----CCceEEEc
Q 045029 143 SGAAFLGFMLRVQALHDEENTTITELKDSDAVLEVPGLVNSVPAKVWPSVVFNKEWAEVLNQQARTFR----GTKGIMVN 218 (485)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 218 (485)
...... .+ .... ...+......+. .....+..
T Consensus 160 ~~~~~~------------------------------~~---------~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~ 195 (398)
T 3oti_A 160 SAWRTR------------------------------GM---------HRSI-----ASFLTDLMDKHQVSLPEPVATIES 195 (398)
T ss_dssp TTCCCT------------------------------TH---------HHHH-----HTTCHHHHHHTTCCCCCCSEEECS
T ss_pred cCCCcc------------------------------ch---------hhHH-----HHHHHHHHHHcCCCCCCCCeEEEe
Confidence 321000 00 0000 000000001110 01111111
Q ss_pred ChhhhhHHHHHHhhCCCCCCCCeEEeccccCCCCCCCCCCCCCCCChhhHhhhhccCCCCcEEEEeecCcccC--CHHHH
Q 045029 219 TFEELESHAVRSFSDGKSKTPPLYPMGPILNIKGENYDLGEGGADKKADIMAWLDDQPESSVVFLCFGSWGSF--GEDQV 296 (485)
Q Consensus 219 s~~~le~~~~~~~~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vyvs~GS~~~~--~~~~~ 296 (485)
....+... ... ...++.++ +. .....+.+|+...+++++|||++||.... ..+.+
T Consensus 196 ~~~~~~~~-----~~~--~~~~~~~~----~~------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~ 252 (398)
T 3oti_A 196 FPPSLLLE-----AEP--EGWFMRWV----PY------------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAV 252 (398)
T ss_dssp SCGGGGTT-----SCC--CSBCCCCC----CC------------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGH
T ss_pred CCHHHCCC-----CCC--CCCCcccc----CC------------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHH
Confidence 11111100 000 00001111 00 11233455666555567999999998643 55678
Q ss_pred HHHHHHHHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchhhhhccCCccccccccCchh
Q 045029 297 KEIACALEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQIAVLAHPAIGGFVSHCGWNS 376 (485)
Q Consensus 297 ~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~vL~h~~~~~~itHgG~~s 376 (485)
.++++++++.+.++||+.++.. ...+. ..++|+.+.+|+|+.++|+++++ ||||||+||
T Consensus 253 ~~~~~~l~~~~~~~v~~~g~~~--------------~~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t 311 (398)
T 3oti_A 253 EPIIAAAGEVDADFVLALGDLD--------------ISPLG-----TLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGT 311 (398)
T ss_dssp HHHHHHHHTSSSEEEEECTTSC--------------CGGGC-----SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHH
T ss_pred HHHHHHHHcCCCEEEEEECCcC--------------hhhhc-----cCCCcEEEEccCCHHHHHhhCCE--EEECCCHHH
Confidence 8899999999999999987652 00011 12357899999999999999888 999999999
Q ss_pred hHHHHhhCCcEeeccccccchhhH--HHHHHhhceeEEeeecccccccccCCcccCHHHHHHHHHHHhcCChHHHHHHHH
Q 045029 377 TLESIWFGVPIATWPMYAEQQFNA--FELVVELGLAVEIKMDYRNDIMIENPTVVNAEVIERGIRCLMEHNSEMRKRVKE 454 (485)
Q Consensus 377 ~~eal~~GvP~v~~P~~~DQ~~na--~r~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~r~~a~~ 454 (485)
++||+++|+|+|++|+..||+.|| .++++. |+|+.++.. ..+++.|. ++++ |+++|+++++
T Consensus 312 ~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~-g~g~~~~~~-----------~~~~~~l~----~ll~-~~~~~~~~~~ 374 (398)
T 3oti_A 312 VMTAIDAGIPQLLAPDPRDQFQHTAREAVSRR-GIGLVSTSD-----------KVDADLLR----RLIG-DESLRTAARE 374 (398)
T ss_dssp HHHHHHHTCCEEECCCTTCCSSCTTHHHHHHH-TSEEECCGG-----------GCCHHHHH----HHHH-CHHHHHHHHH
T ss_pred HHHHHHhCCCEEEcCCCchhHHHHHHHHHHHC-CCEEeeCCC-----------CCCHHHHH----HHHc-CHHHHHHHHH
Confidence 999999999999999999999999 998886 999998754 56777776 7888 7999999999
Q ss_pred HHHHHHHhhhcCCChHHHHHHHHHHHh
Q 045029 455 MSEKARKALSDGGSSFSSMGRLIDDFL 481 (485)
Q Consensus 455 ~~~~~~~~~~~gg~~~~~~~~~~~~~~ 481 (485)
+++.+.+. .+. ..+.+.+.++.
T Consensus 375 ~~~~~~~~----~~~-~~~~~~l~~l~ 396 (398)
T 3oti_A 375 VREEMVAL----PTP-AETVRRIVERI 396 (398)
T ss_dssp HHHHHHTS----CCH-HHHHHHHHHHH
T ss_pred HHHHHHhC----CCH-HHHHHHHHHHh
Confidence 99998763 333 34444455443
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=4.5e-32 Score=269.38 Aligned_cols=355 Identities=13% Similarity=0.176 Sum_probs=221.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcCCCCCchhhhhhhhhhccCCCCCeEEEEC-CCCCCCCC---
Q 045029 3 KAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMKLPHDNTVATYTQSLAASNLSSRIKFINL-PDDQPDKE--- 78 (485)
Q Consensus 3 ~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l-~~~~~~~~--- 78 (485)
++||+|++.++.||++|++.|+++|+++||+ |++++++ .+.+.+. ..++.+..+ ........
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~Ghe--V~v~~~~--------~~~~~~~----~~g~~~~~~~~~~~~~~~~~~ 66 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHE--VLIAAPP--------ELQATAH----GAGLTTAGIRGNDRTGDTGGT 66 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCE--EEEEECH--------HHHHHHH----HBTCEEEEC------------
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCE--EEEecCh--------hhHHHHH----hCCCceeeecCCccchhhhhh
Confidence 4689999999999999999999999999999 6688765 4555444 457777777 32110000
Q ss_pred -----C------CChHhHHHHHHHhhhhh-------HHHHHHhhhhcCCCCCCccEEEECCCchhHHHHHHHcCCCeEEE
Q 045029 79 -----S------TPPKRFFGHFVESKKPH-------VKEVVANLTDESPDSPRLAGFVLDMFCTCMIEVADEFKVPSYLF 140 (485)
Q Consensus 79 -----~------~~~~~~~~~~~~~~~~~-------~~~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~ 140 (485)
. .........+....... +.. +.+++++ .+||+||+|....++..+|+++|||++.+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~l~~----~~PD~Vv~~~~~~~~~~aa~~~giP~v~~ 141 (391)
T 3tsa_A 67 TQLRFPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPE-YLRLAEA----WRPSVLLVDVCALIGRVLGGLLDLPVVLH 141 (391)
T ss_dssp --CCSCCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH----HCCSEEEEETTCHHHHHHHHHTTCCEEEE
T ss_pred hcccccccccccccchhHHHHHHHHHHHHhhcchhhHHH-HHHHHHh----cCCCEEEeCcchhHHHHHHHHhCCCEEEE
Confidence 0 00011111111111111 222 2333333 49999999987777888999999998886
Q ss_pred echhHHHHHHHHHHhhhhccccccccccCCCCCccccCCCCCCCCCCCCCccccCccHHHHHHHHHHhhcC-----CceE
Q 045029 141 FTSGAAFLGFMLRVQALHDEENTTITELKDSDAVLEVPGLVNSVPAKVWPSVVFNKEWAEVLNQQARTFRG-----TKGI 215 (485)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 215 (485)
......... .+. ......+......+.. ....
T Consensus 142 ~~~~~~~~~------------------------------------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (391)
T 3tsa_A 142 RWGVDPTAG------------------------------------------PFS-DRAHELLDPVCRHHGLTGLPTPELI 178 (391)
T ss_dssp CCSCCCTTT------------------------------------------HHH-HHHHHHHHHHHHHTTSSSSCCCSEE
T ss_pred ecCCccccc------------------------------------------ccc-chHHHHHHHHHHHcCCCCCCCCceE
Confidence 533211000 000 0000111111111110 0112
Q ss_pred EEcChhhhhHHHHHHhhCCCCCCCCeEEeccccCCCCCCCCCCCCCCCChhhHhhhhccCCCCcEEEEeecCccc--CC-
Q 045029 216 MVNTFEELESHAVRSFSDGKSKTPPLYPMGPILNIKGENYDLGEGGADKKADIMAWLDDQPESSVVFLCFGSWGS--FG- 292 (485)
Q Consensus 216 ~~~s~~~le~~~~~~~~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vyvs~GS~~~--~~- 292 (485)
+.....+++.. .+. ...++.++ |. .....+..|+...+++++||+++||... ..
T Consensus 179 ~~~~~~~~~~~-----~~~--~~~~~~~~-p~---------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~ 235 (391)
T 3tsa_A 179 LDPCPPSLQAS-----DAP--QGAPVQYV-PY---------------NGSGAFPAWGAARTSARRVCICMGRMVLNATGP 235 (391)
T ss_dssp EECSCGGGSCT-----TSC--CCEECCCC-CC---------------CCCEECCGGGSSCCSSEEEEEECCHHHHHHHCS
T ss_pred EEecChhhcCC-----CCC--ccCCeeee-cC---------------CCCcCCCchhhcCCCCCEEEEEcCCCCCcccch
Confidence 22221211110 000 00001122 10 0122344677655567899999999843 23
Q ss_pred HHHHHHHHHHHHhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchhhhhccCCccccccc
Q 045029 293 EDQVKEIACALEQS-GHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQIAVLAHPAIGGFVSH 371 (485)
Q Consensus 293 ~~~~~~~~~al~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~vL~h~~~~~~itH 371 (485)
.+.+..++++ ++. +.+++|+.++.. ...+. ...+|+.+.+|+|+.++|+++++ ||||
T Consensus 236 ~~~~~~~~~~-~~~p~~~~v~~~~~~~--------------~~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~ 293 (391)
T 3tsa_A 236 APLLRAVAAA-TELPGVEAVIAVPPEH--------------RALLT-----DLPDNARIAESVPLNLFLRTCEL--VICA 293 (391)
T ss_dssp HHHHHHHHHH-HTSTTEEEEEECCGGG--------------GGGCT-----TCCTTEEECCSCCGGGTGGGCSE--EEEC
T ss_pred HHHHHHHHHh-ccCCCeEEEEEECCcc--------------hhhcc-----cCCCCEEEeccCCHHHHHhhCCE--EEeC
Confidence 6668888888 877 789999876541 01111 12357889999999999988777 9999
Q ss_pred cCchhhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEeee--cccccccccCCcccCHHHHHHHHHHHhcCChHHH
Q 045029 372 CGWNSTLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKM--DYRNDIMIENPTVVNAEVIERGIRCLMEHNSEMR 449 (485)
Q Consensus 372 gG~~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~--~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~r 449 (485)
||.||++||+++|+|+|++|...||+.|+.++++. |+|+.+.. + ..+.+.|.++|+++++ |++++
T Consensus 294 ~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~-g~g~~~~~~~~-----------~~~~~~l~~ai~~ll~-~~~~~ 360 (391)
T 3tsa_A 294 GGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAA-GAGICLPDEQA-----------QSDHEQFTDSIATVLG-DTGFA 360 (391)
T ss_dssp CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHT-TSEEECCSHHH-----------HTCHHHHHHHHHHHHT-CTHHH
T ss_pred CCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHc-CCEEecCcccc-----------cCCHHHHHHHHHHHHc-CHHHH
Confidence 99999999999999999999999999999998886 99999875 4 5789999999999999 79999
Q ss_pred HHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhh
Q 045029 450 KRVKEMSEKARKALSDGGSSFSSMGRLIDDFLD 482 (485)
Q Consensus 450 ~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~ 482 (485)
++++++++.+.+ +++. ..+.+.|.++..
T Consensus 361 ~~~~~~~~~~~~----~~~~-~~~~~~i~~~~~ 388 (391)
T 3tsa_A 361 AAAIKLSDEITA----MPHP-AALVRTLENTAA 388 (391)
T ss_dssp HHHHHHHHHHHT----SCCH-HHHHHHHHHC--
T ss_pred HHHHHHHHHHHc----CCCH-HHHHHHHHHHHh
Confidence 999998888765 3343 344445555543
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.97 E-value=3.5e-29 Score=250.25 Aligned_cols=365 Identities=15% Similarity=0.152 Sum_probs=227.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcCCCCCchhhhhhhhhhccCCCCCeEEEECCCC---------
Q 045029 3 KAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMKLPHDNTVATYTQSLAASNLSSRIKFINLPDD--------- 73 (485)
Q Consensus 3 ~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~--------- 73 (485)
++||+|++.++.||++|++.|+++|+++||+ |++++++ .+.+.+. ..++.+..++..
T Consensus 20 ~MrIl~~~~~~~Gh~~~~~~la~~L~~~Ghe--V~v~~~~--------~~~~~~~----~~g~~~~~~~~~~~~~~~~~~ 85 (412)
T 3otg_A 20 HMRVLFASLGTHGHTYPLLPLATAARAAGHE--VTFATGE--------GFAGTLR----KLGFEPVATGMPVFDGFLAAL 85 (412)
T ss_dssp SCEEEEECCSSHHHHGGGHHHHHHHHHTTCE--EEEEECG--------GGHHHHH----HTTCEEEECCCCHHHHHHHHH
T ss_pred eeEEEEEcCCCcccHHHHHHHHHHHHHCCCE--EEEEccH--------HHHHHHH----hcCCceeecCcccccchhhhh
Confidence 5799999999999999999999999999999 7788876 3433333 457888888741
Q ss_pred -------CCCCCC-CChHhHHHHHHHhh--hhhHHHHHHhhhhcCCCCCCccEEEECCCchhHHHHHHHcCCCeEEEech
Q 045029 74 -------QPDKES-TPPKRFFGHFVESK--KPHVKEVVANLTDESPDSPRLAGFVLDMFCTCMIEVADEFKVPSYLFFTS 143 (485)
Q Consensus 74 -------~~~~~~-~~~~~~~~~~~~~~--~~~~~~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~ 143 (485)
..+... ......+...+... ...+..+ .+++++ .+||+||+|....++..+|+++|||++.+...
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~l~~----~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~ 160 (412)
T 3otg_A 86 RIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDEL-QPVIER----LRPDLVVQEISNYGAGLAALKAGIPTICHGVG 160 (412)
T ss_dssp HHHHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHH-HHHHHH----HCCSEEEEETTCHHHHHHHHHHTCCEEEECCS
T ss_pred hhhhcccCCccCChhHhhHHHHHHHhccchHHHHHHH-HHHHHh----cCCCEEEECchhhHHHHHHHHcCCCEEEeccc
Confidence 000000 00000111111111 1112222 233332 39999999987777888899999998876443
Q ss_pred hHH----HHHHHHHHhhhhccccccccccCCCCCccccCCCCCCCCCCCCCccccCccHHHHHHHHHHhhcCCceEEEcC
Q 045029 144 GAA----FLGFMLRVQALHDEENTTITELKDSDAVLEVPGLVNSVPAKVWPSVVFNKEWAEVLNQQARTFRGTKGIMVNT 219 (485)
Q Consensus 144 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 219 (485)
... .......+....... ++. ... ... ....+.++..+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~-----------------g~~-~~~--~~~------------------~~~~d~~i~~~ 202 (412)
T 3otg_A 161 RDTPDDLTRSIEEEVRGLAQRL-----------------GLD-LPP--GRI------------------DGFGNPFIDIF 202 (412)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHT-----------------TCC-CCS--SCC------------------GGGGCCEEECS
T ss_pred ccCchhhhHHHHHHHHHHHHHc-----------------CCC-CCc--ccc------------------cCCCCeEEeeC
Confidence 221 000000000000000 000 000 000 01112233322
Q ss_pred hhhhhHHHHHHhhCCCCCCCCeEEeccccCCCCCCCCCCCCCCCChhhHhhh-hccCCCCcEEEEeecCcccCCHHHHHH
Q 045029 220 FEELESHAVRSFSDGKSKTPPLYPMGPILNIKGENYDLGEGGADKKADIMAW-LDDQPESSVVFLCFGSWGSFGEDQVKE 298 (485)
Q Consensus 220 ~~~le~~~~~~~~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~vyvs~GS~~~~~~~~~~~ 298 (485)
-..++..... ......++-+.... ...+..+| ....+++++||+++||......+.+.+
T Consensus 203 ~~~~~~~~~~-------~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~ 262 (412)
T 3otg_A 203 PPSLQEPEFR-------ARPRRHELRPVPFA-------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRA 262 (412)
T ss_dssp CGGGSCHHHH-------TCTTEEECCCCCCC-------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHH
T ss_pred CHHhcCCccc-------CCCCcceeeccCCC-------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHH
Confidence 2222211100 01111111111000 11223445 222334579999999987566778889
Q ss_pred HHHHHHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchhhhhccCCccccccccCchhhH
Q 045029 299 IACALEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQIAVLAHPAIGGFVSHCGWNSTL 378 (485)
Q Consensus 299 ~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~vL~h~~~~~~itHgG~~s~~ 378 (485)
+++++++.+.+++|+.++... .+.+. ...+++.+.+|+|+..+|+++++ ||+|||+||++
T Consensus 263 ~~~~l~~~~~~~~~~~g~~~~---------~~~l~---------~~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~ 322 (412)
T 3otg_A 263 AIDGLAGLDADVLVASGPSLD---------VSGLG---------EVPANVRLESWVPQAALLPHVDL--VVHHGGSGTTL 322 (412)
T ss_dssp HHHHHHTSSSEEEEECCSSCC---------CTTCC---------CCCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHH
T ss_pred HHHHHHcCCCEEEEEECCCCC---------hhhhc---------cCCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHH
Confidence 999999889999999876521 11111 12356889999999999999888 99999999999
Q ss_pred HHHhhCCcEeeccccccchhhHHHHHHhhceeEEeeecccccccccCCcccCHHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 045029 379 ESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYRNDIMIENPTVVNAEVIERGIRCLMEHNSEMRKRVKEMSEK 458 (485)
Q Consensus 379 eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~r~~a~~~~~~ 458 (485)
||+++|+|+|++|...||..|+.++++. |+|+.+..+ .+++++|.++|+++++ |+++++++++.++.
T Consensus 323 Ea~a~G~P~v~~p~~~~q~~~~~~v~~~-g~g~~~~~~-----------~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~ 389 (412)
T 3otg_A 323 GALGAGVPQLSFPWAGDSFANAQAVAQA-GAGDHLLPD-----------NISPDSVSGAAKRLLA-EESYRAGARAVAAE 389 (412)
T ss_dssp HHHHHTCCEEECCCSTTHHHHHHHHHHH-TSEEECCGG-----------GCCHHHHHHHHHHHHH-CHHHHHHHHHHHHH
T ss_pred HHHHhCCCEEecCCchhHHHHHHHHHHc-CCEEecCcc-----------cCCHHHHHHHHHHHHh-CHHHHHHHHHHHHH
Confidence 9999999999999999999999998886 999998754 6799999999999999 79999999888888
Q ss_pred HHHhhhcCCChHHHHHHHHHHHhh
Q 045029 459 ARKALSDGGSSFSSMGRLIDDFLD 482 (485)
Q Consensus 459 ~~~~~~~gg~~~~~~~~~~~~~~~ 482 (485)
+.+. .+. ..+.+.+.++..
T Consensus 390 ~~~~----~~~-~~~~~~~~~l~~ 408 (412)
T 3otg_A 390 IAAM----PGP-DEVVRLLPGFAS 408 (412)
T ss_dssp HHHS----CCH-HHHHTTHHHHHC
T ss_pred HhcC----CCH-HHHHHHHHHHhc
Confidence 7653 343 344444444443
No 20
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.96 E-value=2.3e-28 Score=213.10 Aligned_cols=165 Identities=22% Similarity=0.455 Sum_probs=138.7
Q ss_pred CCChhhHhhhhccCCCCcEEEEeecCcc-cCCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhh
Q 045029 262 ADKKADIMAWLDDQPESSVVFLCFGSWG-SFGEDQVKEIACALEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGF 340 (485)
Q Consensus 262 ~~~~~~l~~~l~~~~~~~~vyvs~GS~~-~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 340 (485)
+++++++.+|++..+++++|||++||.. ....+.+..++++|++.+.+++|+.++.. ...+
T Consensus 5 ~~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~--------------~~~~---- 66 (170)
T 2o6l_A 5 KPLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK--------------PDTL---- 66 (170)
T ss_dssp CCCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC--------------CTTC----
T ss_pred CCCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC--------------cccC----
Confidence 4578899999987666689999999986 44667788999999988999999987541 0112
Q ss_pred HhhhcCCcceEeecchhhhhccCCccccccccCchhhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEeeeccccc
Q 045029 341 MDRTANIGKVIGWAPQIAVLAHPAIGGFVSHCGWNSTLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYRND 420 (485)
Q Consensus 341 ~~~~~~~~~v~~~~pq~~vL~h~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~ 420 (485)
++|+.+.+|+||.++|.|+++++||||||+||++||+++|+|+|++|...||..||.++++. |+|+.++..
T Consensus 67 ----~~~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~-g~g~~~~~~---- 137 (170)
T 2o6l_A 67 ----GLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR-GAAVRVDFN---- 137 (170)
T ss_dssp ----CTTEEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT-TSEEECCTT----
T ss_pred ----CCcEEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc-CCeEEeccc----
Confidence 25688999999999997777777999999999999999999999999999999999998885 999988754
Q ss_pred ccccCCcccCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Q 045029 421 IMIENPTVVNAEVIERGIRCLMEHNSEMRKRVKEMSEKARK 461 (485)
Q Consensus 421 ~~~~~~~~~~~~~l~~av~~vl~~~~~~r~~a~~~~~~~~~ 461 (485)
.++.++|.++|+++++ |++||++++++++.+++
T Consensus 138 -------~~~~~~l~~~i~~ll~-~~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 138 -------TMSSTDLLNALKRVIN-DPSYKENVMKLSRIQHD 170 (170)
T ss_dssp -------TCCHHHHHHHHHHHHH-CHHHHHHHHHHC-----
T ss_pred -------cCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHhhC
Confidence 6899999999999998 79999999999998763
No 21
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.95 E-value=8.9e-28 Score=235.39 Aligned_cols=343 Identities=15% Similarity=0.069 Sum_probs=197.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcCCCCCchhhhhhhhhhccCCCCCeEEEECCCCCCCCC-C
Q 045029 1 MKKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMKLPHDNTVATYTQSLAASNLSSRIKFINLPDDQPDKE-S 79 (485)
Q Consensus 1 m~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~-~ 79 (485)
|++ ||+|...|+.||++|.++||++|++|||+ |+|++++... + .+.+. ..++.+..++....+.. .
T Consensus 1 M~~-~i~i~~GGTgGHi~palala~~L~~~g~~--V~~vg~~~g~----e--~~~v~----~~g~~~~~i~~~~~~~~~~ 67 (365)
T 3s2u_A 1 MKG-NVLIMAGGTGGHVFPALACAREFQARGYA--VHWLGTPRGI----E--NDLVP----KAGLPLHLIQVSGLRGKGL 67 (365)
T ss_dssp --C-EEEEECCSSHHHHHHHHHHHHHHHHTTCE--EEEEECSSST----H--HHHTG----GGTCCEEECC---------
T ss_pred CCC-cEEEEcCCCHHHHHHHHHHHHHHHhCCCE--EEEEECCchH----h--hchhh----hcCCcEEEEECCCcCCCCH
Confidence 776 89999999999999999999999999999 7788865211 0 11122 34677777765432111 1
Q ss_pred CChHhHHHHHHHhhhhhHHHHHHhhhhcCCCCCCccEEEECCCc--hhHHHHHHHcCCCeEEEechhHHHHHHHHHHhhh
Q 045029 80 TPPKRFFGHFVESKKPHVKEVVANLTDESPDSPRLAGFVLDMFC--TCMIEVADEFKVPSYLFFTSGAAFLGFMLRVQAL 157 (485)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~D~vI~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 157 (485)
.........++. .+....+-+.+ .+||+||++... ..+..+|+.+|||+++.-...
T Consensus 68 ~~~~~~~~~~~~----~~~~~~~~l~~-----~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n~------------- 125 (365)
T 3s2u_A 68 KSLVKAPLELLK----SLFQALRVIRQ-----LRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNA------------- 125 (365)
T ss_dssp -----CHHHHHH----HHHHHHHHHHH-----HCCSEEEECSSSTHHHHHHHHHHTTCCEEEEECSS-------------
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHh-----cCCCEEEEcCCcchHHHHHHHHHcCCCEEEEecch-------------
Confidence 011111111111 11222222222 399999988653 345677899999988642111
Q ss_pred hccccccccccCCCCCccccCCCCCCCCCCCCCccccCccHHHHHHHHHHhhcCCceEEEcChhhhhHHHHHHhhCCCCC
Q 045029 158 HDEENTTITELKDSDAVLEVPGLVNSVPAKVWPSVVFNKEWAEVLNQQARTFRGTKGIMVNTFEELESHAVRSFSDGKSK 237 (485)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~ 237 (485)
+||+.+ +... +.+..+ ..++.+.. +.
T Consensus 126 -------------------~~G~~n---------------------r~l~--~~a~~v-~~~~~~~~-----------~~ 151 (365)
T 3s2u_A 126 -------------------VAGTAN---------------------RSLA--PIARRV-CEAFPDTF-----------PA 151 (365)
T ss_dssp -------------------SCCHHH---------------------HHHG--GGCSEE-EESSTTSS-----------CC
T ss_pred -------------------hhhhHH---------------------Hhhc--ccccee-eecccccc-----------cC
Confidence 122110 0000 111222 22322110 02
Q ss_pred CCCeEEeccccCCCCCCCCCCCCCCCChhhHhhhhccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhc----CCceEEE
Q 045029 238 TPPLYPMGPILNIKGENYDLGEGGADKKADIMAWLDDQPESSVVFLCFGSWGSFGEDQVKEIACALEQS----GHRFLWS 313 (485)
Q Consensus 238 ~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vyvs~GS~~~~~~~~~~~~~~al~~~----~~~~l~~ 313 (485)
..+.+.+|+.+...... ...-...++ +.+++|+|..||....... +.+.+++... +..++|.
T Consensus 152 ~~k~~~~g~pvr~~~~~----------~~~~~~~~~--~~~~~ilv~gGs~g~~~~~--~~~~~al~~l~~~~~~~vi~~ 217 (365)
T 3s2u_A 152 SDKRLTTGNPVRGELFL----------DAHARAPLT--GRRVNLLVLGGSLGAEPLN--KLLPEALAQVPLEIRPAIRHQ 217 (365)
T ss_dssp ---CEECCCCCCGGGCC----------CTTSSCCCT--TSCCEEEECCTTTTCSHHH--HHHHHHHHTSCTTTCCEEEEE
T ss_pred cCcEEEECCCCchhhcc----------chhhhcccC--CCCcEEEEECCcCCccccc--hhhHHHHHhcccccceEEEEe
Confidence 23466777554322210 000011122 2346899999997643332 3355565543 4567787
Q ss_pred EcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchh-hhhccCCccccccccCchhhHHHHhhCCcEeeccc
Q 045029 314 LRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQI-AVLAHPAIGGFVSHCGWNSTLESIWFGVPIATWPM 392 (485)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~-~vL~h~~~~~~itHgG~~s~~eal~~GvP~v~~P~ 392 (485)
+|... .+.+.+. ......++.+.+|+++. .+++.+++ +|||+|.+|+.|++++|+|+|.+|+
T Consensus 218 ~G~~~--------------~~~~~~~-~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~ 280 (365)
T 3s2u_A 218 AGRQH--------------AEITAER-YRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPL 280 (365)
T ss_dssp CCTTT--------------HHHHHHH-HHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-
T ss_pred cCccc--------------cccccce-ecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEecc
Confidence 76541 0111111 12334577888999875 58988888 9999999999999999999999997
Q ss_pred c----ccchhhHHHHHHhhceeEEeeecccccccccCCcccCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHhhhcCCC
Q 045029 393 Y----AEQQFNAFELVVELGLAVEIKMDYRNDIMIENPTVVNAEVIERGIRCLMEHNSEMRKRVKEMSEKARKALSDGGS 468 (485)
Q Consensus 393 ~----~DQ~~na~r~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~r~~a~~~~~~~~~~~~~gg~ 468 (485)
. .+|..||+.+++. |+|+.+..+ .+|+++|.++|.++++ |++.+++ |++.+++. ....
T Consensus 281 p~~~~~~Q~~NA~~l~~~-G~a~~l~~~-----------~~~~~~L~~~i~~ll~-d~~~~~~---m~~~a~~~-~~~~- 342 (365)
T 3s2u_A 281 PHAIDDHQTRNAEFLVRS-GAGRLLPQK-----------STGAAELAAQLSEVLM-HPETLRS---MADQARSL-AKPE- 342 (365)
T ss_dssp ----CCHHHHHHHHHHTT-TSEEECCTT-----------TCCHHHHHHHHHHHHH-CTHHHHH---HHHHHHHT-CCTT-
T ss_pred CCCCCcHHHHHHHHHHHC-CCEEEeecC-----------CCCHHHHHHHHHHHHC-CHHHHHH---HHHHHHhc-CCcc-
Confidence 4 5899999999997 999998754 6899999999999999 6654443 44444443 2222
Q ss_pred hHHHHHHHHHHHh
Q 045029 469 SFSSMGRLIDDFL 481 (485)
Q Consensus 469 ~~~~~~~~~~~~~ 481 (485)
+...+.+.|.++.
T Consensus 343 aa~~ia~~i~~la 355 (365)
T 3s2u_A 343 ATRTVVDACLEVA 355 (365)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH
Confidence 3344555555554
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.81 E-value=7.8e-18 Score=164.87 Aligned_cols=342 Identities=14% Similarity=0.057 Sum_probs=196.7
Q ss_pred CCC--cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcCCCCCchhhhhhhhhhccCCCCCeEEEECCCCCCCCC
Q 045029 1 MKK--AQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMKLPHDNTVATYTQSLAASNLSSRIKFINLPDDQPDKE 78 (485)
Q Consensus 1 m~~--~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~ 78 (485)
|++ +||++++.+..||..+.+.|+++|+++||+ |++++.... ....... ..++.+..++....+..
T Consensus 2 M~~m~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~--V~v~~~~~~------~~~~~~~----~~g~~~~~~~~~~~~~~ 69 (364)
T 1f0k_A 2 MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQ--VRWLGTADR------MEADLVP----KHGIEIDFIRISGLRGK 69 (364)
T ss_dssp -----CEEEEECCSSHHHHHHHHHHHHHHHTTTCE--EEEEECTTS------THHHHGG----GGTCEEEECCCCCCTTC
T ss_pred CCCCCcEEEEEeCCCccchhHHHHHHHHHHHcCCE--EEEEecCCc------chhhhcc----ccCCceEEecCCccCcC
Confidence 554 799999988889999999999999999999 668876521 0111121 24677777654321111
Q ss_pred CCChHhHHHHHHHhhhhhHHHHHHhhhhcCCCCCCccEEEECCCc--hhHHHHHHHcCCCeEEEechhHHHHHHHHHHhh
Q 045029 79 STPPKRFFGHFVESKKPHVKEVVANLTDESPDSPRLAGFVLDMFC--TCMIEVADEFKVPSYLFFTSGAAFLGFMLRVQA 156 (485)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~D~vI~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 156 (485)
.....+...... ...+..+.+.+.+ .+||+|+++... ..+..+++.+|+|+++......
T Consensus 70 --~~~~~~~~~~~~-~~~~~~l~~~l~~-----~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~----------- 130 (364)
T 1f0k_A 70 --GIKALIAAPLRI-FNAWRQARAIMKA-----YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI----------- 130 (364)
T ss_dssp --CHHHHHTCHHHH-HHHHHHHHHHHHH-----HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS-----------
T ss_pred --ccHHHHHHHHHH-HHHHHHHHHHHHh-----cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC-----------
Confidence 111111111111 0112222222322 389999998643 3455678889999875422110
Q ss_pred hhccccccccccCCCCCccccCCCCCCCCCCCCCccccCccHHHHHHHHHHhhcCCceEEEcChhhhhHHHHHHhhCCCC
Q 045029 157 LHDEENTTITELKDSDAVLEVPGLVNSVPAKVWPSVVFNKEWAEVLNQQARTFRGTKGIMVNTFEELESHAVRSFSDGKS 236 (485)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~ 236 (485)
++. . .+. ..+..+.+++.+ .+.
T Consensus 131 ---------------------~~~------------------~---~~~--~~~~~d~v~~~~-~~~------------- 152 (364)
T 1f0k_A 131 ---------------------AGL------------------T---NKW--LAKIATKVMQAF-PGA------------- 152 (364)
T ss_dssp ---------------------CCH------------------H---HHH--HTTTCSEEEESS-TTS-------------
T ss_pred ---------------------CcH------------------H---HHH--HHHhCCEEEecC-hhh-------------
Confidence 000 0 000 112334444432 111
Q ss_pred CCCCeEEeccccCCCCCCCCCCCCCCCChhhHhhhhccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhc--CCceEEEE
Q 045029 237 KTPPLYPMGPILNIKGENYDLGEGGADKKADIMAWLDDQPESSVVFLCFGSWGSFGEDQVKEIACALEQS--GHRFLWSL 314 (485)
Q Consensus 237 ~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vyvs~GS~~~~~~~~~~~~~~al~~~--~~~~l~~~ 314 (485)
.+++..+|..+..... .... ..+.+...+++++|++..|+.. .......++++++.. +.++++.+
T Consensus 153 -~~~~~~i~n~v~~~~~--------~~~~--~~~~~~~~~~~~~il~~~g~~~--~~k~~~~li~a~~~l~~~~~~l~i~ 219 (364)
T 1f0k_A 153 -FPNAEVVGNPVRTDVL--------ALPL--PQQRLAGREGPVRVLVVGGSQG--ARILNQTMPQVAAKLGDSVTIWHQS 219 (364)
T ss_dssp -SSSCEECCCCCCHHHH--------TSCC--HHHHHTTCCSSEEEEEECTTTC--CHHHHHHHHHHHHHHGGGEEEEEEC
T ss_pred -cCCceEeCCccchhhc--------ccch--hhhhcccCCCCcEEEEEcCchH--hHHHHHHHHHHHHHhcCCcEEEEEc
Confidence 1245555543221110 0001 1111222223456777778864 233344556666654 56767777
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCChhhHh---hhc-CCcceEeecc-hhhhhccCCccccccccCchhhHHHHhhCCcEee
Q 045029 315 RRPPSKDTFEKPSDYEDPTEVLPEGFMD---RTA-NIGKVIGWAP-QIAVLAHPAIGGFVSHCGWNSTLESIWFGVPIAT 389 (485)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~---~~~-~~~~v~~~~p-q~~vL~h~~~~~~itHgG~~s~~eal~~GvP~v~ 389 (485)
|... .+.+.+ +.. +++.+.+|++ -..++..+++ ||+++|.++++||+++|+|+|+
T Consensus 220 G~~~------------------~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~ 279 (364)
T 1f0k_A 220 GKGS------------------QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALF 279 (364)
T ss_dssp CTTC------------------HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEE
T ss_pred CCch------------------HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEE
Confidence 6541 122221 111 4688889994 4668988888 9999998999999999999999
Q ss_pred cccc---ccchhhHHHHHHhhceeEEeeecccccccccCCcccCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHhhhcC
Q 045029 390 WPMY---AEQQFNAFELVVELGLAVEIKMDYRNDIMIENPTVVNAEVIERGIRCLMEHNSEMRKRVKEMSEKARKALSDG 466 (485)
Q Consensus 390 ~P~~---~DQ~~na~r~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~r~~a~~~~~~~~~~~~~g 466 (485)
.|.. .||..|+..+.+. |.|..++.. ..+.++++++|.++ |++.+++..+.+ ++.. .
T Consensus 280 ~~~~g~~~~q~~~~~~~~~~-g~g~~~~~~-----------d~~~~~la~~i~~l---~~~~~~~~~~~~---~~~~-~- 339 (364)
T 1f0k_A 280 VPFQHKDRQQYWNALPLEKA-GAAKIIEQP-----------QLSVDAVANTLAGW---SRETLLTMAERA---RAAS-I- 339 (364)
T ss_dssp CCCCCTTCHHHHHHHHHHHT-TSEEECCGG-----------GCCHHHHHHHHHTC---CHHHHHHHHHHH---HHTC-C-
T ss_pred eeCCCCchhHHHHHHHHHhC-CcEEEeccc-----------cCCHHHHHHHHHhc---CHHHHHHHHHHH---HHhh-c-
Confidence 9988 7999999998887 999887643 46799999999988 365555544333 3332 2
Q ss_pred CChHHHHHHHHHHHhhcC
Q 045029 467 GSSFSSMGRLIDDFLDNI 484 (485)
Q Consensus 467 g~~~~~~~~~~~~~~~~~ 484 (485)
.-++..+.+.+.++.+++
T Consensus 340 ~~~~~~~~~~~~~~y~~~ 357 (364)
T 1f0k_A 340 PDATERVANEVSRVARAL 357 (364)
T ss_dssp TTHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHHHHH
Confidence 234555555556665543
No 23
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.57 E-value=3.5e-15 Score=133.13 Aligned_cols=139 Identities=17% Similarity=0.133 Sum_probs=93.0
Q ss_pred CCCcEEEEeecCcccCCHHHHHHH-----HHHHHhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCC---------CChh-
Q 045029 276 PESSVVFLCFGSWGSFGEDQVKEI-----ACALEQSG-HRFLWSLRRPPSKDTFEKPSDYEDPTEV---------LPEG- 339 (485)
Q Consensus 276 ~~~~~vyvs~GS~~~~~~~~~~~~-----~~al~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~- 339 (485)
+++++|||+.||... -.+.+..+ +++|...+ .+++|++|.....- ...+... +|.+
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~-------~~~~~~~~~~~~~~~l~p~~~ 97 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSE-------FEHLVQERGGQRESQKIPIDQ 97 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCC-------CCSHHHHHTCEECSCCCSSCT
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhh-------HHHHHHhhhcccccccccccc
Confidence 345799999999732 22333333 48888777 79999998763100 0000000 1200
Q ss_pred ------hH----hhhcCCcceEeecchh-hhhc-cCCccccccccCchhhHHHHhhCCcEeecccc----ccchhhHHHH
Q 045029 340 ------FM----DRTANIGKVIGWAPQI-AVLA-HPAIGGFVSHCGWNSTLESIWFGVPIATWPMY----AEQQFNAFEL 403 (485)
Q Consensus 340 ------~~----~~~~~~~~v~~~~pq~-~vL~-h~~~~~~itHgG~~s~~eal~~GvP~v~~P~~----~DQ~~na~r~ 403 (485)
.. ....-++.+.+|+++. .+|+ .+++ +|||||+||++|++++|+|+|++|.. .||..||+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l 175 (224)
T 2jzc_A 98 FGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKF 175 (224)
T ss_dssp TCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHH
T ss_pred ccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHH
Confidence 00 0000123455888775 7898 8888 99999999999999999999999984 3699999999
Q ss_pred HHhhceeEEeeecccccccccCCcccCHHHHHHHHHHH
Q 045029 404 VVELGLAVEIKMDYRNDIMIENPTVVNAEVIERGIRCL 441 (485)
Q Consensus 404 ~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~l~~av~~v 441 (485)
++. |+|+.+ +.++|.++|+++
T Consensus 176 ~~~-G~~~~~----------------~~~~L~~~i~~l 196 (224)
T 2jzc_A 176 VEL-GYVWSC----------------APTETGLIAGLR 196 (224)
T ss_dssp HHH-SCCCEE----------------CSCTTTHHHHHH
T ss_pred HHC-CCEEEc----------------CHHHHHHHHHHH
Confidence 986 998643 345667777766
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.29 E-value=1.4e-10 Score=107.83 Aligned_cols=114 Identities=15% Similarity=0.107 Sum_probs=85.8
Q ss_pred CcEEEEeecCcccCCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhh--hcCCcceEeecc
Q 045029 278 SSVVFLCFGSWGSFGEDQVKEIACALEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDR--TANIGKVIGWAP 355 (485)
Q Consensus 278 ~~~vyvs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~v~~~~p 355 (485)
.+.|+|++|.... ......++++|.... ++.++.|.+. ...+.+... ...++.+.+|++
T Consensus 157 ~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~~----------------~~~~~l~~~~~~~~~v~v~~~~~ 217 (282)
T 3hbm_A 157 KYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSSN----------------PNLKKLQKFAKLHNNIRLFIDHE 217 (282)
T ss_dssp CEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTTC----------------TTHHHHHHHHHTCSSEEEEESCS
T ss_pred CCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCCc----------------hHHHHHHHHHhhCCCEEEEeCHH
Confidence 4589999997532 234556788886644 5666676552 111222211 124788889998
Q ss_pred hhh-hhccCCccccccccCchhhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEee
Q 045029 356 QIA-VLAHPAIGGFVSHCGWNSTLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIK 414 (485)
Q Consensus 356 q~~-vL~h~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~ 414 (485)
+.. ++..+++ +||+|| +|+.|+++.|+|+|++|+..+|..||..+++. |+++.+.
T Consensus 218 ~m~~~m~~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~ 273 (282)
T 3hbm_A 218 NIAKLMNESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYK 273 (282)
T ss_dssp CHHHHHHTEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECG
T ss_pred HHHHHHHHCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcc
Confidence 775 8888888 999999 89999999999999999999999999999997 9998875
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.15 E-value=1.7e-08 Score=100.73 Aligned_cols=84 Identities=12% Similarity=0.053 Sum_probs=59.8
Q ss_pred cCCcceEeecchh---hhhccCCccccccc----cCchhhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEeeecc
Q 045029 345 ANIGKVIGWAPQI---AVLAHPAIGGFVSH----CGWNSTLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDY 417 (485)
Q Consensus 345 ~~~~~v~~~~pq~---~vL~h~~~~~~itH----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~ 417 (485)
.+++.+.+|+|+. .++..+++ ||.- |.-++++||+++|+|+|+.+.. .....+.+. +.|+.++
T Consensus 305 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~~----~~~e~i~~~-~~g~~~~--- 374 (438)
T 3c48_A 305 EKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARVG----GLPIAVAEG-ETGLLVD--- 374 (438)
T ss_dssp TTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESCT----THHHHSCBT-TTEEEES---
T ss_pred CCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCCC----ChhHHhhCC-CcEEECC---
Confidence 3578888999864 47888888 6543 2345899999999999997643 333333332 5777665
Q ss_pred cccccccCCcccCHHHHHHHHHHHhcCChHHH
Q 045029 418 RNDIMIENPTVVNAEVIERGIRCLMEHNSEMR 449 (485)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~r 449 (485)
.-+.++++++|.++++ |++.+
T Consensus 375 ----------~~d~~~la~~i~~l~~-~~~~~ 395 (438)
T 3c48_A 375 ----------GHSPHAWADALATLLD-DDETR 395 (438)
T ss_dssp ----------SCCHHHHHHHHHHHHH-CHHHH
T ss_pred ----------CCCHHHHHHHHHHHHc-CHHHH
Confidence 3478999999999999 66443
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.08 E-value=5.8e-08 Score=95.28 Aligned_cols=322 Identities=11% Similarity=0.065 Sum_probs=164.3
Q ss_pred CCCcEEEEEcC--C--CccCHHHHHHHHHHHHhCCCCeEEEEEEcCCCCCchhhhhhhhhhccCCCCCeEEEECCCCCCC
Q 045029 1 MKKAQLVFIPS--P--GAGHLVSTVEVARLLVDRDDRLSVTVLIMKLPHDNTVATYTQSLAASNLSSRIKFINLPDDQPD 76 (485)
Q Consensus 1 m~~~~i~~~~~--~--~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~ 76 (485)
|+++||++++. + ..|.-.-...|++.| +||+ |++++..... ...... ....++.+..++....
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~--v~v~~~~~~~-----~~~~~~---~~~~~~~~~~~~~~~~- 68 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPES--IVVFASTQNA-----EEAHAY---DKTLDYEVIRWPRSVM- 68 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGG--EEEEEECSSH-----HHHHHH---HTTCSSEEEEESSSSC-
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCe--EEEEECCCCc-----cchhhh---ccccceEEEEcccccc-
Confidence 56789999875 3 578888999999999 7999 5566654210 100111 1245677776654321
Q ss_pred CCCCChHhHHHHHHHhhhhhHHHHHHhhhhcCCCCCCccEEEECCCc--hhHHHHHHHcCCCeEEEechhHHHHHHHHHH
Q 045029 77 KESTPPKRFFGHFVESKKPHVKEVVANLTDESPDSPRLAGFVLDMFC--TCMIEVADEFKVPSYLFFTSGAAFLGFMLRV 154 (485)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~D~vI~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 154 (485)
. ... . .. ..+.++++. .++|+|++.... .....+++++|+|.+++....... .
T Consensus 69 --~----~~~-~-------~~-~~l~~~~~~----~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~-----~- 123 (394)
T 3okp_A 69 --L----PTP-T-------TA-HAMAEIIRE----REIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEV-----G- 123 (394)
T ss_dssp --C----SCH-H-------HH-HHHHHHHHH----TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHH-----H-
T ss_pred --c----cch-h-------hH-HHHHHHHHh----cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchh-----h-
Confidence 0 001 0 11 112222222 389999976543 344567889999955543322110 0
Q ss_pred hhhhccccccccccCCCCCccccCCCCCCCCCCCCCccccCccHHHHHHHHHHhhcCCceEEEcChhhhhHHHHHHhhCC
Q 045029 155 QALHDEENTTITELKDSDAVLEVPGLVNSVPAKVWPSVVFNKEWAEVLNQQARTFRGTKGIMVNTFEELESHAVRSFSDG 234 (485)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~ 234 (485)
.. . ......+.+ ..++.++.++..|-...+ .....+..
T Consensus 124 -------------------------~~-~------------~~~~~~~~~--~~~~~~d~ii~~s~~~~~-~~~~~~~~- 161 (394)
T 3okp_A 124 -------------------------WS-M------------LPGSRQSLR--KIGTEVDVLTYISQYTLR-RFKSAFGS- 161 (394)
T ss_dssp -------------------------HT-T------------SHHHHHHHH--HHHHHCSEEEESCHHHHH-HHHHHHCS-
T ss_pred -------------------------hh-h------------cchhhHHHH--HHHHhCCEEEEcCHHHHH-HHHHhcCC-
Confidence 00 0 000111111 122456667766643222 12122211
Q ss_pred CCCCCCeEEeccccCCCCCCCCCCCCCCCChhhHhhhhccCCCCcEEEEeecCcc-cCCHHHHHHHHHHHHh--cCCceE
Q 045029 235 KSKTPPLYPMGPILNIKGENYDLGEGGADKKADIMAWLDDQPESSVVFLCFGSWG-SFGEDQVKEIACALEQ--SGHRFL 311 (485)
Q Consensus 235 ~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vyvs~GS~~-~~~~~~~~~~~~al~~--~~~~~l 311 (485)
..++..+..-+......+ ........+.+-+.-. ++..+++..|+.. .-..+.+.+.+..+.. .+.+++
T Consensus 162 ---~~~~~vi~ngv~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~ 233 (394)
T 3okp_A 162 ---HPTFEHLPSGVDVKRFTP----ATPEDKSATRKKLGFT-DTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLL 233 (394)
T ss_dssp ---SSEEEECCCCBCTTTSCC----CCHHHHHHHHHHTTCC-TTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEE
T ss_pred ---CCCeEEecCCcCHHHcCC----CCchhhHHHHHhcCCC-cCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEE
Confidence 123555554333221100 0001112333333222 2235666778864 2233333333333333 255665
Q ss_pred EEEcCCCCCCCCCCCCCCCCCCCCCChhhH---hhhcCCcceEeecchhh---hhccCCcccccc-----------ccCc
Q 045029 312 WSLRRPPSKDTFEKPSDYEDPTEVLPEGFM---DRTANIGKVIGWAPQIA---VLAHPAIGGFVS-----------HCGW 374 (485)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~---~~~~~~~~v~~~~pq~~---vL~h~~~~~~it-----------HgG~ 374 (485)
++ |.+. ..+.+. ....+++.+.+|+|+.+ ++..+++ +|. -|.-
T Consensus 234 i~-G~g~-----------------~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~ 293 (394)
T 3okp_A 234 IV-GSGR-----------------YESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLG 293 (394)
T ss_dssp EE-CCCT-----------------THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSC
T ss_pred EE-cCch-----------------HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccC
Confidence 54 3221 111111 22346788899997665 6778888 654 4445
Q ss_pred hhhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEeeecccccccccCCcccCHHHHHHHHHHHhcCChHHHH
Q 045029 375 NSTLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYRNDIMIENPTVVNAEVIERGIRCLMEHNSEMRK 450 (485)
Q Consensus 375 ~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~r~ 450 (485)
++++||+++|+|+|+.+..+- . .+... |.|+.++ .-+.++++++|.++++ +++.++
T Consensus 294 ~~~~Ea~a~G~PvI~~~~~~~----~-e~i~~-~~g~~~~-------------~~d~~~l~~~i~~l~~-~~~~~~ 349 (394)
T 3okp_A 294 IVYLEAQACGVPVIAGTSGGA----P-ETVTP-ATGLVVE-------------GSDVDKLSELLIELLD-DPIRRA 349 (394)
T ss_dssp HHHHHHHHTTCCEEECSSTTG----G-GGCCT-TTEEECC-------------TTCHHHHHHHHHHHHT-CHHHHH
T ss_pred cHHHHHHHcCCCEEEeCCCCh----H-HHHhc-CCceEeC-------------CCCHHHHHHHHHHHHh-CHHHHH
Confidence 689999999999999775432 2 12344 5676664 3478999999999999 664433
No 27
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.07 E-value=1.7e-08 Score=98.88 Aligned_cols=83 Identities=14% Similarity=0.154 Sum_probs=63.0
Q ss_pred CCcceEeecch---hhhhccCCccccccccCchhhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEeeeccccccc
Q 045029 346 NIGKVIGWAPQ---IAVLAHPAIGGFVSHCGWNSTLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYRNDIM 422 (485)
Q Consensus 346 ~~~~v~~~~pq---~~vL~h~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~~~ 422 (485)
+++.+.+++++ ..+++.+++ ||+..|. .++||+++|+|+|+.+..++.. .+++. |.|+.++
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad~--~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~~----e~v~~-g~g~lv~-------- 326 (384)
T 1vgv_A 263 KNVILIDPQEYLPFVWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTERP----EAVTA-GTVRLVG-------- 326 (384)
T ss_dssp TTEEEECCCCHHHHHHHHHHCSE--EEESSST-GGGTGGGGTCCEEEESSCCSCH----HHHHH-TSEEEEC--------
T ss_pred CCEEEeCCCCHHHHHHHHHhCcE--EEECCcc-hHHHHHHcCCCEEEccCCCCcc----hhhhC-CceEEeC--------
Confidence 57888666664 457888888 9988854 4889999999999998754433 34565 8887764
Q ss_pred ccCCcccCHHHHHHHHHHHhcCChHHHHH
Q 045029 423 IENPTVVNAEVIERGIRCLMEHNSEMRKR 451 (485)
Q Consensus 423 ~~~~~~~~~~~l~~av~~vl~~~~~~r~~ 451 (485)
. +.++++++|.++++ |++.+++
T Consensus 327 -----~-d~~~la~~i~~ll~-d~~~~~~ 348 (384)
T 1vgv_A 327 -----T-DKQRIVEEVTRLLK-DENEYQA 348 (384)
T ss_dssp -----S-SHHHHHHHHHHHHH-CHHHHHH
T ss_pred -----C-CHHHHHHHHHHHHh-ChHHHhh
Confidence 3 78999999999998 6754443
No 28
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.04 E-value=6.2e-09 Score=102.69 Aligned_cols=108 Identities=18% Similarity=0.154 Sum_probs=75.4
Q ss_pred CCcceEeecch---hhhhccCCccccccccCchhhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEeeeccccccc
Q 045029 346 NIGKVIGWAPQ---IAVLAHPAIGGFVSHCGWNSTLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYRNDIM 422 (485)
Q Consensus 346 ~~~~v~~~~pq---~~vL~h~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~~~ 422 (485)
+++.+++++++ ..+++++++ +|+-.|. .+.||.++|+|+|+.|-.++++. +++. |.|+.+.
T Consensus 282 ~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg-~~~EA~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~-------- 345 (403)
T 3ot5_A 282 ERIHLIEPLDAIDFHNFLRKSYL--VFTDSGG-VQEEAPGMGVPVLVLRDTTERPE----GIEA-GTLKLIG-------- 345 (403)
T ss_dssp TTEEEECCCCHHHHHHHHHHEEE--EEECCHH-HHHHGGGTTCCEEECCSSCSCHH----HHHH-TSEEECC--------
T ss_pred CCEEEeCCCCHHHHHHHHHhcCE--EEECCcc-HHHHHHHhCCCEEEecCCCcchh----heeC-CcEEEcC--------
Confidence 56888888863 457878888 9988752 22699999999999976666654 2465 8776653
Q ss_pred ccCCcccCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHH
Q 045029 423 IENPTVVNAEVIERGIRCLMEHNSEMRKRVKEMSEKARKALSDGGSSFSSMGRLIDDF 480 (485)
Q Consensus 423 ~~~~~~~~~~~l~~av~~vl~~~~~~r~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~ 480 (485)
.+.++|.+++.++++ |++.+++.+ +..+. ...|+++.+.++.+.+.+
T Consensus 346 ------~d~~~l~~ai~~ll~-~~~~~~~m~---~~~~~-~g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 346 ------TNKENLIKEALDLLD-NKESHDKMA---QAANP-YGDGFAANRILAAIKSHF 392 (403)
T ss_dssp ------SCHHHHHHHHHHHHH-CHHHHHHHH---HSCCT-TCCSCHHHHHHHHHHHHH
T ss_pred ------CCHHHHHHHHHHHHc-CHHHHHHHH---hhcCc-ccCCcHHHHHHHHHHHHh
Confidence 378999999999998 676555433 32222 356777776666555544
No 29
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.02 E-value=1.3e-08 Score=99.54 Aligned_cols=85 Identities=19% Similarity=0.203 Sum_probs=63.8
Q ss_pred CCcceEeecch---hhhhccCCccccccccCchhhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEeeeccccccc
Q 045029 346 NIGKVIGWAPQ---IAVLAHPAIGGFVSHCGWNSTLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYRNDIM 422 (485)
Q Consensus 346 ~~~~v~~~~pq---~~vL~h~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~~~ 422 (485)
+++.+.+++++ ..+++.+++ ||++.| |.++||+++|+|+|+.+..+++.. +++. |.|+.+.
T Consensus 255 ~~v~~~g~~g~~~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~-g~g~lv~-------- 318 (376)
T 1v4v_A 255 RNFVLLDPLEYGSMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKA-GILKLAG-------- 318 (376)
T ss_dssp TTEEEECCCCHHHHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHH-TSEEECC--------
T ss_pred CCEEEECCCCHHHHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcC-CceEECC--------
Confidence 46788866554 478888888 998884 445599999999999987777666 2455 8887653
Q ss_pred ccCCcccCHHHHHHHHHHHhcCChHHHHHHH
Q 045029 423 IENPTVVNAEVIERGIRCLMEHNSEMRKRVK 453 (485)
Q Consensus 423 ~~~~~~~~~~~l~~av~~vl~~~~~~r~~a~ 453 (485)
.+.++|+++|.++++ |++.+++..
T Consensus 319 ------~d~~~la~~i~~ll~-d~~~~~~~~ 342 (376)
T 1v4v_A 319 ------TDPEGVYRVVKGLLE-NPEELSRMR 342 (376)
T ss_dssp ------SCHHHHHHHHHHHHT-CHHHHHHHH
T ss_pred ------CCHHHHHHHHHHHHh-ChHhhhhhc
Confidence 378999999999999 775554433
No 30
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.99 E-value=3.2e-08 Score=97.35 Aligned_cols=102 Identities=15% Similarity=0.176 Sum_probs=69.7
Q ss_pred CCcceEeecc---hhhhhccCCccccccccCchhhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEeeeccccccc
Q 045029 346 NIGKVIGWAP---QIAVLAHPAIGGFVSHCGWNSTLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYRNDIM 422 (485)
Q Consensus 346 ~~~~v~~~~p---q~~vL~h~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~~~ 422 (485)
+++.++++++ ...+++.+++ +|+-.| |.+.||.++|+|+|+..-..+++ .+++. |.++.+.
T Consensus 288 ~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v~~-G~~~lv~-------- 351 (396)
T 3dzc_A 288 SNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAVAA-GTVKLVG-------- 351 (396)
T ss_dssp TTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHHHH-TSEEECT--------
T ss_pred CCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcch----HHHHc-CceEEcC--------
Confidence 5677877764 4467888888 999988 65679999999999985555543 24565 8775442
Q ss_pred ccCCcccCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHhhhcCCChHHHHH
Q 045029 423 IENPTVVNAEVIERGIRCLMEHNSEMRKRVKEMSEKARKALSDGGSSFSSMG 474 (485)
Q Consensus 423 ~~~~~~~~~~~l~~av~~vl~~~~~~r~~a~~~~~~~~~~~~~gg~~~~~~~ 474 (485)
.+.++|.+++.++++ |++.+++.+ +..+. ...|+++.+.++
T Consensus 352 ------~d~~~l~~ai~~ll~-d~~~~~~m~---~~~~~-~~~~~aa~ri~~ 392 (396)
T 3dzc_A 352 ------TNQQQICDALSLLLT-DPQAYQAMS---QAHNP-YGDGKACQRIAD 392 (396)
T ss_dssp ------TCHHHHHHHHHHHHH-CHHHHHHHH---TSCCT-TCCSCHHHHHHH
T ss_pred ------CCHHHHHHHHHHHHc-CHHHHHHHh---hccCC-CcCChHHHHHHH
Confidence 268999999999998 676555433 32222 355666555444
No 31
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=98.95 E-value=1.3e-07 Score=94.07 Aligned_cols=79 Identities=10% Similarity=-0.017 Sum_probs=55.1
Q ss_pred CCcceEeecchhh---hhccCCccccccc--cCchhhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEeeeccccc
Q 045029 346 NIGKVIGWAPQIA---VLAHPAIGGFVSH--CGWNSTLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYRND 420 (485)
Q Consensus 346 ~~~~v~~~~pq~~---vL~h~~~~~~itH--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~ 420 (485)
+++.+.+|+|+.+ ++..+++-++-++ |--++++||+++|+|+|+-... ... .+.+. |.|..++
T Consensus 311 ~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~----~~~-e~~~~-~~g~~~~------ 378 (439)
T 3fro_A 311 NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLR-DIITN-ETGILVK------ 378 (439)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESST----HHH-HHCCT-TTCEEEC------
T ss_pred CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCC----Ccc-eeEEc-CceEEeC------
Confidence 3344568898864 6778888332222 3346899999999999997543 333 33445 7887775
Q ss_pred ccccCCcccCHHHHHHHHHHHhc
Q 045029 421 IMIENPTVVNAEVIERGIRCLME 443 (485)
Q Consensus 421 ~~~~~~~~~~~~~l~~av~~vl~ 443 (485)
.-+.++++++|.++++
T Consensus 379 -------~~d~~~la~~i~~ll~ 394 (439)
T 3fro_A 379 -------AGDPGELANAILKALE 394 (439)
T ss_dssp -------TTCHHHHHHHHHHHHH
T ss_pred -------CCCHHHHHHHHHHHHh
Confidence 3478999999999997
No 32
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.90 E-value=2.5e-08 Score=96.06 Aligned_cols=127 Identities=16% Similarity=0.055 Sum_probs=79.4
Q ss_pred EEEeecCcccCCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchh---
Q 045029 281 VFLCFGSWGSFGEDQVKEIACALEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQI--- 357 (485)
Q Consensus 281 vyvs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~--- 357 (485)
+++..|+.. ....+..++++++..+.+++++ |.... ...+ +.+..+..+++.+.+|+|+.
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~-G~g~~-------------~~~l-~~~~~~~~~~v~~~g~~~~~~l~ 226 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLA-GPAWE-------------PEYF-DEITRRYGSTVEPIGEVGGERRL 226 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEE-SCCCC-------------HHHH-HHHHHHHTTTEEECCCCCHHHHH
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEE-eCccc-------------HHHH-HHHHHHhCCCEEEeccCCHHHHH
Confidence 344457754 3344667778887778886664 43210 0001 11222333788889999976
Q ss_pred hhhccCCccccccc-----------cC-chhhHHHHhhCCcEeeccccccchhhHHHHHH--hhceeEEeeecccccccc
Q 045029 358 AVLAHPAIGGFVSH-----------CG-WNSTLESIWFGVPIATWPMYAEQQFNAFELVV--ELGLAVEIKMDYRNDIMI 423 (485)
Q Consensus 358 ~vL~h~~~~~~itH-----------gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~--~~g~G~~l~~~~~~~~~~ 423 (485)
.++..+++-++-+. -| -++++||+++|+|+|+....+ +...+.+ . +.|+.++
T Consensus 227 ~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~----~~e~~~~~~~-~~g~~~~--------- 292 (342)
T 2iuy_A 227 DLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGC----LAEIVPSVGE-VVGYGTD--------- 292 (342)
T ss_dssp HHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTT----HHHHGGGGEE-ECCSSSC---------
T ss_pred HHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCC----hHHHhcccCC-CceEEcC---------
Confidence 68888888333333 23 357999999999999987633 3333323 2 4565442
Q ss_pred cCCcccCHHHHHHHHHHHhc
Q 045029 424 ENPTVVNAEVIERGIRCLME 443 (485)
Q Consensus 424 ~~~~~~~~~~l~~av~~vl~ 443 (485)
. +.++++++|.++++
T Consensus 293 ----~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 293 ----F-APDEARRTLAGLPA 307 (342)
T ss_dssp ----C-CHHHHHHHHHTSCC
T ss_pred ----C-CHHHHHHHHHHHHH
Confidence 5 88999999998876
No 33
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=98.87 E-value=4.7e-07 Score=89.15 Aligned_cols=88 Identities=10% Similarity=0.092 Sum_probs=62.5
Q ss_pred cCCcceEeecchh---hhhccCCcccccc--ccCch-hhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEeeeccc
Q 045029 345 ANIGKVIGWAPQI---AVLAHPAIGGFVS--HCGWN-STLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYR 418 (485)
Q Consensus 345 ~~~~~v~~~~pq~---~vL~h~~~~~~it--HgG~~-s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~ 418 (485)
.+++.+.+++|+. .++..+++.++-+ +.|++ +++||+++|+|+|+.+. ......+.+. +.|+.++
T Consensus 262 ~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~---- 332 (406)
T 2gek_A 262 AGHLRFLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADG-DAGRLVP---- 332 (406)
T ss_dssp GGGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTT-TSSEECC----
T ss_pred cCcEEEEecCCHHHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCC-CceEEeC----
Confidence 3668888999875 6888888833332 44544 89999999999999866 3344343333 6777664
Q ss_pred ccccccCCcccCHHHHHHHHHHHhcCChHHHHH
Q 045029 419 NDIMIENPTVVNAEVIERGIRCLMEHNSEMRKR 451 (485)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~av~~vl~~~~~~r~~ 451 (485)
.-+.++++++|.++++ +++.+++
T Consensus 333 ---------~~d~~~l~~~i~~l~~-~~~~~~~ 355 (406)
T 2gek_A 333 ---------VDDADGMAAALIGILE-DDQLRAG 355 (406)
T ss_dssp ---------TTCHHHHHHHHHHHHH-CHHHHHH
T ss_pred ---------CCCHHHHHHHHHHHHc-CHHHHHH
Confidence 2478999999999998 6654433
No 34
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.80 E-value=4.4e-07 Score=88.41 Aligned_cols=83 Identities=19% Similarity=0.162 Sum_probs=61.5
Q ss_pred CCcceEeecchh---hhhccCCccccccccCchhhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEeeeccccccc
Q 045029 346 NIGKVIGWAPQI---AVLAHPAIGGFVSHCGWNSTLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYRNDIM 422 (485)
Q Consensus 346 ~~~~v~~~~pq~---~vL~h~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~~~ 422 (485)
+++.+.+++++. .+++.+++ ||+..| +.++||+++|+|+|+....+..+ .+.+. |.|+.++
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~----e~v~~-g~g~~v~-------- 326 (375)
T 3beo_A 263 GRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERP----EGIEA-GTLKLAG-------- 326 (375)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCH----HHHHT-TSEEECC--------
T ss_pred CCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCc----eeecC-CceEEcC--------
Confidence 578887777654 57878888 898874 45889999999999986434332 34565 8887663
Q ss_pred ccCCcccCHHHHHHHHHHHhcCChHHHHH
Q 045029 423 IENPTVVNAEVIERGIRCLMEHNSEMRKR 451 (485)
Q Consensus 423 ~~~~~~~~~~~l~~av~~vl~~~~~~r~~ 451 (485)
. +.++++++|.++++ |++.+++
T Consensus 327 -----~-d~~~la~~i~~ll~-~~~~~~~ 348 (375)
T 3beo_A 327 -----T-DEETIFSLADELLS-DKEAHDK 348 (375)
T ss_dssp -----S-CHHHHHHHHHHHHH-CHHHHHH
T ss_pred -----C-CHHHHHHHHHHHHh-ChHhHhh
Confidence 3 78999999999998 6755544
No 35
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=98.77 E-value=1.6e-06 Score=88.15 Aligned_cols=84 Identities=17% Similarity=0.024 Sum_probs=58.9
Q ss_pred cCCcceEeecchhh---hhccC----Cccccccc---cC-chhhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEe
Q 045029 345 ANIGKVIGWAPQIA---VLAHP----AIGGFVSH---CG-WNSTLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEI 413 (485)
Q Consensus 345 ~~~~~v~~~~pq~~---vL~h~----~~~~~itH---gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l 413 (485)
.+++.+.+++|+.+ ++..+ ++ ||.- -| -++++||+++|+|+|+.... ..... ...-+.|+.+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~----g~~e~-v~~~~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRNG----GPAEI-LDGGKYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESSB----HHHHH-TGGGTSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecCC----CHHHH-hcCCceEEEe
Confidence 36788889997654 67777 77 5532 23 35899999999999998643 23323 3332478777
Q ss_pred eecccccccccCCcccCHHHHHHHHHHHhcCChHHH
Q 045029 414 KMDYRNDIMIENPTVVNAEVIERGIRCLMEHNSEMR 449 (485)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~r 449 (485)
+ .-+.++++++|.++++ |++.+
T Consensus 407 ~-------------~~d~~~la~~i~~ll~-~~~~~ 428 (499)
T 2r60_A 407 D-------------PEDPEDIARGLLKAFE-SEETW 428 (499)
T ss_dssp C-------------TTCHHHHHHHHHHHHS-CHHHH
T ss_pred C-------------CCCHHHHHHHHHHHHh-CHHHH
Confidence 5 3478999999999999 66443
No 36
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=98.73 E-value=1e-05 Score=79.27 Aligned_cols=84 Identities=13% Similarity=0.063 Sum_probs=58.4
Q ss_pred CCcceEeecch-hhhhccCCccccc----cccCchhhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEeeeccccc
Q 045029 346 NIGKVIGWAPQ-IAVLAHPAIGGFV----SHCGWNSTLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYRND 420 (485)
Q Consensus 346 ~~~~v~~~~pq-~~vL~h~~~~~~i----tHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~ 420 (485)
+++.+.++..+ ..++..+++ +| .-|.-++++||+++|+|+|+.+..+ ....+.+. +.|+.++
T Consensus 267 ~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~----~~e~v~~~-~~g~~~~------ 333 (394)
T 2jjm_A 267 DRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVGG----IPEVIQHG-DTGYLCE------ 333 (394)
T ss_dssp GGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCTT----STTTCCBT-TTEEEEC------
T ss_pred CeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCCC----hHHHhhcC-CceEEeC------
Confidence 56777776543 458888888 66 4455678999999999999987543 22122222 5677664
Q ss_pred ccccCCcccCHHHHHHHHHHHhcCChHHHH
Q 045029 421 IMIENPTVVNAEVIERGIRCLMEHNSEMRK 450 (485)
Q Consensus 421 ~~~~~~~~~~~~~l~~av~~vl~~~~~~r~ 450 (485)
.-+.++++++|.++++ |++.++
T Consensus 334 -------~~d~~~la~~i~~l~~-~~~~~~ 355 (394)
T 2jjm_A 334 -------VGDTTGVADQAIQLLK-DEELHR 355 (394)
T ss_dssp -------TTCHHHHHHHHHHHHH-CHHHHH
T ss_pred -------CCCHHHHHHHHHHHHc-CHHHHH
Confidence 2378999999999998 665433
No 37
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.71 E-value=3.3e-05 Score=74.79 Aligned_cols=88 Identities=15% Similarity=0.100 Sum_probs=63.7
Q ss_pred CCcceEeecch-hhhhccCCcccccc----ccCchhhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEeeeccccc
Q 045029 346 NIGKVIGWAPQ-IAVLAHPAIGGFVS----HCGWNSTLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYRND 420 (485)
Q Consensus 346 ~~~~v~~~~pq-~~vL~h~~~~~~it----HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~ 420 (485)
+++.+.++..+ ..++..+++ +|. -|.-++++||+++|+|+|+.... .+...+.+. +.|+.++.
T Consensus 253 ~~v~~~g~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~-~~g~~~~~----- 320 (374)
T 2iw1_A 253 SNVHFFSGRNDVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAVC----GYAHYIADA-NCGTVIAE----- 320 (374)
T ss_dssp GGEEEESCCSCHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETTS----TTTHHHHHH-TCEEEECS-----
T ss_pred CcEEECCCcccHHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecCC----CchhhhccC-CceEEeCC-----
Confidence 56777787543 447888888 664 45667899999999999997653 344455554 88887751
Q ss_pred ccccCCcccCHHHHHHHHHHHhcCChHHHHHHH
Q 045029 421 IMIENPTVVNAEVIERGIRCLMEHNSEMRKRVK 453 (485)
Q Consensus 421 ~~~~~~~~~~~~~l~~av~~vl~~~~~~r~~a~ 453 (485)
.-+.++++++|.++++ |++.+++..
T Consensus 321 -------~~~~~~l~~~i~~l~~-~~~~~~~~~ 345 (374)
T 2iw1_A 321 -------PFSQEQLNEVLRKALT-QSPLRMAWA 345 (374)
T ss_dssp -------SCCHHHHHHHHHHHHH-CHHHHHHHH
T ss_pred -------CCCHHHHHHHHHHHHc-ChHHHHHHH
Confidence 2378999999999998 665544433
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.66 E-value=1.2e-05 Score=79.42 Aligned_cols=83 Identities=16% Similarity=0.107 Sum_probs=57.6
Q ss_pred CCcceEeecc---h---hhhhccCCcccccccc----CchhhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEeee
Q 045029 346 NIGKVIGWAP---Q---IAVLAHPAIGGFVSHC----GWNSTLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKM 415 (485)
Q Consensus 346 ~~~~v~~~~p---q---~~vL~h~~~~~~itHg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~ 415 (485)
+++.+.+|++ + ..++..+++ ||.-. .-++++||+++|+|+|+.+.. .+...+.+. +.|+.+
T Consensus 293 ~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~~----g~~e~i~~~-~~g~l~-- 363 (416)
T 2x6q_A 293 YDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAVG----GIKFQIVDG-ETGFLV-- 363 (416)
T ss_dssp TTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESCH----HHHHHCCBT-TTEEEE--
T ss_pred CcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccCC----CChhheecC-CCeEEE--
Confidence 5788888876 2 346777887 66443 456899999999999997653 333332232 567655
Q ss_pred cccccccccCCcccCHHHHHHHHHHHhcCChHHHHH
Q 045029 416 DYRNDIMIENPTVVNAEVIERGIRCLMEHNSEMRKR 451 (485)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~r~~ 451 (485)
. +.++++++|.++++ |++.+++
T Consensus 364 ------------~-d~~~la~~i~~ll~-~~~~~~~ 385 (416)
T 2x6q_A 364 ------------R-DANEAVEVVLYLLK-HPEVSKE 385 (416)
T ss_dssp ------------S-SHHHHHHHHHHHHH-CHHHHHH
T ss_pred ------------C-CHHHHHHHHHHHHh-CHHHHHH
Confidence 2 67899999999998 6654443
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.61 E-value=1.7e-07 Score=91.59 Aligned_cols=156 Identities=12% Similarity=0.093 Sum_probs=92.9
Q ss_pred CcEEEEeecCcccCCH-HHHHHHHHHHHhc----CCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhh-----hcCC
Q 045029 278 SSVVFLCFGSWGSFGE-DQVKEIACALEQS----GHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDR-----TANI 347 (485)
Q Consensus 278 ~~~vyvs~GS~~~~~~-~~~~~~~~al~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~~~~ 347 (485)
++.++++.|....... +.+..+++|+.+. +.++|+..+.. +-+...+. ..++
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~------------------~~~~l~~~~~~~~~~~~ 264 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR------------------TKKRLEDLEGFKELGDK 264 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH------------------HHHHHHTSGGGGGTGGG
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH------------------HHHHHHHHHHHhcCCCC
Confidence 4588888877543332 4466777777643 67788765321 00111110 1245
Q ss_pred cceEeecc---hhhhhccCCccccccccCchhhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEeeeccccccccc
Q 045029 348 GKVIGWAP---QIAVLAHPAIGGFVSHCGWNSTLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYRNDIMIE 424 (485)
Q Consensus 348 ~~v~~~~p---q~~vL~h~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~~~~~ 424 (485)
+.+++.++ ...+++++++ +||-.|. .+.||.++|+|+|+++-..+-+. .++. |.++.+.
T Consensus 265 v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~~-G~~~lv~---------- 326 (385)
T 4hwg_A 265 IRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE----GMDA-GTLIMSG---------- 326 (385)
T ss_dssp EEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHHH-TCCEECC----------
T ss_pred EEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhhc-CceEEcC----------
Confidence 66665554 4568888888 9999876 46899999999999987554222 2565 8776552
Q ss_pred CCcccCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHhh-hcCCChHHHHHHHHH
Q 045029 425 NPTVVNAEVIERGIRCLMEHNSEMRKRVKEMSEKARKAL-SDGGSSFSSMGRLID 478 (485)
Q Consensus 425 ~~~~~~~~~l~~av~~vl~~~~~~r~~a~~~~~~~~~~~-~~gg~~~~~~~~~~~ 478 (485)
.+.++|.+++.++++ |+..+++.. +... .. .+|+++.+.++.+.+
T Consensus 327 ----~d~~~i~~ai~~ll~-d~~~~~~m~---~~~~-~~~g~g~aa~rI~~~l~~ 372 (385)
T 4hwg_A 327 ----FKAERVLQAVKTITE-EHDNNKRTQ---GLVP-DYNEAGLVSKKILRIVLS 372 (385)
T ss_dssp ----SSHHHHHHHHHHHHT-TCBTTBCCS---CCCH-HHHTCCCHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHh-ChHHHHHhh---ccCC-CCCCCChHHHHHHHHHHH
Confidence 378999999999998 443221111 1011 13 567777765554443
No 40
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.37 E-value=1.1e-06 Score=75.84 Aligned_cols=140 Identities=9% Similarity=0.059 Sum_probs=87.5
Q ss_pred EEEEeecCcccCCHHHHHHHHHHHHhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhh---HhhhcCCcceEeecc
Q 045029 280 VVFLCFGSWGSFGEDQVKEIACALEQS-GHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGF---MDRTANIGKVIGWAP 355 (485)
Q Consensus 280 ~vyvs~GS~~~~~~~~~~~~~~al~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---~~~~~~~~~v~~~~p 355 (485)
.+++..|+.. ....+..++++++.. +.+++++-.+.. ...+-+-. .....+++.+.+|+|
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G~~~~--------------~~~l~~~~~~~~~~l~~~v~~~g~~~ 87 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFSK--------------GDHAERYARKIMKIAPDNVKFLGSVS 87 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCCT--------------TSTHHHHHHHHHHHSCTTEEEEESCC
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEecCcc--------------HHHHHHHHHhhhcccCCcEEEeCCCC
Confidence 3455568754 234466778888776 567666543221 01111111 112345888999999
Q ss_pred h---hhhhccCCcccccc---ccCch-hhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEeeecccccccccCCcc
Q 045029 356 Q---IAVLAHPAIGGFVS---HCGWN-STLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYRNDIMIENPTV 428 (485)
Q Consensus 356 q---~~vL~h~~~~~~it---HgG~~-s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~~~~~~~~~ 428 (485)
+ ..++..+++ +|. +.|++ +++||+++|+|+|+... ..+...+.+. +.|+.+ .
T Consensus 88 ~~e~~~~~~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~-~------------- 146 (177)
T 2f9f_A 88 EEELIDLYSRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINE-KTGYLV-N------------- 146 (177)
T ss_dssp HHHHHHHHHHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBT-TTEEEE-C-------------
T ss_pred HHHHHHHHHhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCC-CccEEe-C-------------
Confidence 7 568888888 554 34544 89999999999999754 3333333333 577766 3
Q ss_pred cCHHHHHHHHHHHhcCChH-HHHHHHHHHH
Q 045029 429 VNAEVIERGIRCLMEHNSE-MRKRVKEMSE 457 (485)
Q Consensus 429 ~~~~~l~~av~~vl~~~~~-~r~~a~~~~~ 457 (485)
-+.++++++|.++++ |++ +++++++.++
T Consensus 147 ~d~~~l~~~i~~l~~-~~~~~~~~~~~~a~ 175 (177)
T 2f9f_A 147 ADVNEIIDAMKKVSK-NPDKFKKDCFRRAK 175 (177)
T ss_dssp SCHHHHHHHHHHHHH-CTTTTHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-CHHHHHHHHHHHHh
Confidence 278999999999998 444 3666655443
No 41
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.25 E-value=0.00016 Score=76.91 Aligned_cols=77 Identities=12% Similarity=-0.014 Sum_probs=49.2
Q ss_pred CCcceEe----ecchhhhhc----cCCccccccc----cCchhhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEe
Q 045029 346 NIGKVIG----WAPQIAVLA----HPAIGGFVSH----CGWNSTLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEI 413 (485)
Q Consensus 346 ~~~~v~~----~~pq~~vL~----h~~~~~~itH----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l 413 (485)
+++.+.+ ++|+..+.. .+++ ||.- +--.+++||+++|+|+|+-.. ......+.+. +.|+.+
T Consensus 640 ~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIasd~----GG~~EiV~dg-~~Gllv 712 (816)
T 3s28_A 640 GQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEIIVHG-KSGFHI 712 (816)
T ss_dssp BBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEESS----BTHHHHCCBT-TTBEEE
T ss_pred CcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEeCC----CChHHHHccC-CcEEEe
Confidence 5677776 445555544 3455 6632 334589999999999999643 3333332333 578777
Q ss_pred eecccccccccCCcccCHHHHHHHHHHHh
Q 045029 414 KMDYRNDIMIENPTVVNAEVIERGIRCLM 442 (485)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~l~~av~~vl 442 (485)
+ .-+.++++++|.+++
T Consensus 713 ~-------------p~D~e~LA~aI~~lL 728 (816)
T 3s28_A 713 D-------------PYHGDQAADTLADFF 728 (816)
T ss_dssp C-------------TTSHHHHHHHHHHHH
T ss_pred C-------------CCCHHHHHHHHHHHH
Confidence 5 347888888887666
No 42
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.48 E-value=0.0015 Score=66.40 Aligned_cols=142 Identities=12% Similarity=0.042 Sum_probs=88.2
Q ss_pred CcEEEEeecCcccCCHHHHHHHHHHHHhcCCceEEE--EcCCCCCCCCCCCCCCCCCCCCCChhhH-hhhcCCcceEeec
Q 045029 278 SSVVFLCFGSWGSFGEDQVKEIACALEQSGHRFLWS--LRRPPSKDTFEKPSDYEDPTEVLPEGFM-DRTANIGKVIGWA 354 (485)
Q Consensus 278 ~~~vyvs~GS~~~~~~~~~~~~~~al~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~v~~~~ 354 (485)
+.++|.||++.....++.+...++-+++.+..++|. .+... + ....+-+.+. ..+.+++.+.+.+
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~--g----------~~~~~~~~~~~~GI~~Rv~F~g~~ 507 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN--G----------ITHPYVERFIKSYLGDSATAHPHS 507 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC--G----------GGHHHHHHHHHHHHGGGEEEECCC
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc--h----------hhHHHHHHHHHcCCCccEEEcCCC
Confidence 359999999988889999999999999888777774 33220 0 0000111111 1233567778888
Q ss_pred chhhhh---ccCCccccc---cccCchhhHHHHhhCCcEeeccccccchhhHHHHH----HhhceeEEeeeccccccccc
Q 045029 355 PQIAVL---AHPAIGGFV---SHCGWNSTLESIWFGVPIATWPMYAEQQFNAFELV----VELGLAVEIKMDYRNDIMIE 424 (485)
Q Consensus 355 pq~~vL---~h~~~~~~i---tHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~r~~----~~~g~G~~l~~~~~~~~~~~ 424 (485)
|+.+.| ..+++ |+ ..+|..|++||+++|||+|+.+-.. .+.|+. ...|+.-.+-
T Consensus 508 p~~e~la~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~----~asRvgaSlL~~~GLpE~LI---------- 571 (631)
T 3q3e_A 508 PYHQYLRILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAE----VHEHIDEGLFKRLGLPEWLI---------- 571 (631)
T ss_dssp CHHHHHHHHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSS----HHHHHHHHHHHHTTCCGGGE----------
T ss_pred CHHHHHHHHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCc----HHHHhHHHHHHhcCCCccee----------
Confidence 876544 66666 54 2377899999999999999987432 222322 2235442111
Q ss_pred CCcccCHHHHHHHHHHHhcCChHHHHH
Q 045029 425 NPTVVNAEVIERGIRCLMEHNSEMRKR 451 (485)
Q Consensus 425 ~~~~~~~~~l~~av~~vl~~~~~~r~~ 451 (485)
.-+.++..+..-++.+ |++.+++
T Consensus 572 ---A~d~eeYv~~Av~La~-D~~~l~~ 594 (631)
T 3q3e_A 572 ---ANTVDEYVERAVRLAE-NHQERLE 594 (631)
T ss_dssp ---ESSHHHHHHHHHHHHH-CHHHHHH
T ss_pred ---cCCHHHHHHHHHHHhC-CHHHHHH
Confidence 2356776666667877 6655444
No 43
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.48 E-value=0.0019 Score=68.27 Aligned_cols=102 Identities=18% Similarity=0.266 Sum_probs=72.2
Q ss_pred CcEEEEeecCcccCCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhh--hcCCcceEeecc
Q 045029 278 SSVVFLCFGSWGSFGEDQVKEIACALEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDR--TANIGKVIGWAP 355 (485)
Q Consensus 278 ~~~vyvs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~v~~~~p 355 (485)
+.++|.||-+....+++.+...++-|++.+--.||..+..... ...+-..+... ..+++.+.+.+|
T Consensus 522 ~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~------------~~~l~~~~~~~gi~~~r~~f~~~~~ 589 (723)
T 4gyw_A 522 DAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG------------EPNIQQYAQNMGLPQNRIIFSPVAP 589 (723)
T ss_dssp TSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGG------------HHHHHHHHHHTTCCGGGEEEEECCC
T ss_pred CCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHH------------HHHHHHHHHhcCCCcCeEEECCCCC
Confidence 4599999999889999999999999999999889988754200 00011111111 125677778888
Q ss_pred hhhhhc-cCCcccccc---ccCchhhHHHHhhCCcEeecc
Q 045029 356 QIAVLA-HPAIGGFVS---HCGWNSTLESIWFGVPIATWP 391 (485)
Q Consensus 356 q~~vL~-h~~~~~~it---HgG~~s~~eal~~GvP~v~~P 391 (485)
+.+-|. +..+.+|+- .+|.+|+.|||++|||+|+++
T Consensus 590 ~~~~l~~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~ 629 (723)
T 4gyw_A 590 KEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMP 629 (723)
T ss_dssp HHHHHHHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCC
T ss_pred HHHHHHHhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEcc
Confidence 665443 233333764 789999999999999999998
No 44
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.36 E-value=0.0041 Score=63.85 Aligned_cols=88 Identities=15% Similarity=0.108 Sum_probs=58.6
Q ss_pred CCcceEeecchh---hhhccCCccccc--c-ccCchhhHHHHhhCCcEeeccccccchhh-HHHHHHhhceeEEeeeccc
Q 045029 346 NIGKVIGWAPQI---AVLAHPAIGGFV--S-HCGWNSTLESIWFGVPIATWPMYAEQQFN-AFELVVELGLAVEIKMDYR 418 (485)
Q Consensus 346 ~~~~v~~~~pq~---~vL~h~~~~~~i--t-HgG~~s~~eal~~GvP~v~~P~~~DQ~~n-a~r~~~~~g~G~~l~~~~~ 418 (485)
+++.+.+++|+. .++..+++ || + .|+-++++||+++|+|+|++|-..=.... +..+.. .|+...+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhc----
Confidence 568888999854 45778887 65 2 25567889999999999997743111111 223333 36553332
Q ss_pred ccccccCCcccCHHHHHHHHHHHhcCChHHHHH
Q 045029 419 NDIMIENPTVVNAEVIERGIRCLMEHNSEMRKR 451 (485)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~av~~vl~~~~~~r~~ 451 (485)
-+.+++++++.++++ |++.+++
T Consensus 507 ----------~~~~~la~~i~~l~~-~~~~~~~ 528 (568)
T 2vsy_A 507 ----------ADDAAFVAKAVALAS-DPAALTA 528 (568)
T ss_dssp ----------SSHHHHHHHHHHHHH-CHHHHHH
T ss_pred ----------CCHHHHHHHHHHHhc-CHHHHHH
Confidence 278899999999998 7755544
No 45
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.21 E-value=0.0049 Score=53.49 Aligned_cols=76 Identities=11% Similarity=-0.025 Sum_probs=55.1
Q ss_pred Ccce-Eeecchh---hhhccCCcccccccc---C-chhhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEeeeccc
Q 045029 347 IGKV-IGWAPQI---AVLAHPAIGGFVSHC---G-WNSTLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYR 418 (485)
Q Consensus 347 ~~~v-~~~~pq~---~vL~h~~~~~~itHg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~ 418 (485)
++.+ .+++++. .++..+++ +|.-. | -.+++||+++|+|+|+.... .+...+ .. +.|+.++
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~-~~-~~g~~~~---- 163 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII-TN-ETGILVK---- 163 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC-CT-TTCEEEC----
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc-CC-CceEEec----
Confidence 7888 8999854 47878888 55322 3 45789999999999987543 333333 33 6777665
Q ss_pred ccccccCCcccCHHHHHHHHHHHhc
Q 045029 419 NDIMIENPTVVNAEVIERGIRCLME 443 (485)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~av~~vl~ 443 (485)
.-+.++++++|.++++
T Consensus 164 ---------~~~~~~l~~~i~~l~~ 179 (200)
T 2bfw_A 164 ---------AGDPGELANAILKALE 179 (200)
T ss_dssp ---------TTCHHHHHHHHHHHHH
T ss_pred ---------CCCHHHHHHHHHHHHh
Confidence 3478999999999987
No 46
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.20 E-value=0.0016 Score=54.76 Aligned_cols=132 Identities=15% Similarity=0.192 Sum_probs=74.3
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHHhcC----CceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeec
Q 045029 279 SVVFLCFGSWGSFGEDQVKEIACALEQSG----HRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWA 354 (485)
Q Consensus 279 ~~vyvs~GS~~~~~~~~~~~~~~al~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~ 354 (485)
+++++..|+.. ....+..+++++.... .++++ +|... ....+ .....+...++.+ +|+
T Consensus 2 ~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~~~l~i-~G~g~-------------~~~~~-~~~~~~~~~~v~~-g~~ 63 (166)
T 3qhp_A 2 PFKIAMVGRYS--NEKNQSVLIKAVALSKYKQDIVLLL-KGKGP-------------DEKKI-KLLAQKLGVKAEF-GFV 63 (166)
T ss_dssp CEEEEEESCCS--TTTTHHHHHHHHHTCTTGGGEEEEE-ECCST-------------THHHH-HHHHHHHTCEEEC-CCC
T ss_pred ceEEEEEeccc--hhcCHHHHHHHHHHhccCCCeEEEE-EeCCc-------------cHHHH-HHHHHHcCCeEEE-eec
Confidence 36777788864 2344566777776642 34433 33321 00001 1112222235677 999
Q ss_pred chhh---hhccCCcccccc----ccCchhhHHHHhhCC-cEeeccccccchhhHHHHHHhhceeEEeeecccccccccCC
Q 045029 355 PQIA---VLAHPAIGGFVS----HCGWNSTLESIWFGV-PIATWPMYAEQQFNAFELVVELGLAVEIKMDYRNDIMIENP 426 (485)
Q Consensus 355 pq~~---vL~h~~~~~~it----HgG~~s~~eal~~Gv-P~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~~~~~~~ 426 (485)
|+.+ ++..+++ +|. -|.-.+++||+++|+ |+|+-...+.-.. +...-+. .+.
T Consensus 64 ~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~----~~~~~~~--~~~------------ 123 (166)
T 3qhp_A 64 NSNELLEILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLSATRQ----FALDERS--LFE------------ 123 (166)
T ss_dssp CHHHHHHHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGG----GCSSGGG--EEC------------
T ss_pred CHHHHHHHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCCchhh----hccCCce--EEc------------
Confidence 8654 6778887 654 233458999999996 9999432221111 1111122 222
Q ss_pred cccCHHHHHHHHHHHhcCChHHHH
Q 045029 427 TVVNAEVIERGIRCLMEHNSEMRK 450 (485)
Q Consensus 427 ~~~~~~~l~~av~~vl~~~~~~r~ 450 (485)
.-+.++++++|.++++ +++.++
T Consensus 124 -~~~~~~l~~~i~~l~~-~~~~~~ 145 (166)
T 3qhp_A 124 -PNNAKDLSAKIDWWLE-NKLERE 145 (166)
T ss_dssp -TTCHHHHHHHHHHHHH-CHHHHH
T ss_pred -CCCHHHHHHHHHHHHh-CHHHHH
Confidence 3478999999999999 664433
No 47
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.13 E-value=0.00097 Score=63.56 Aligned_cols=109 Identities=17% Similarity=0.089 Sum_probs=75.4
Q ss_pred CcceEeecchhhhh---ccCCccccccccCc---------hhhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEee
Q 045029 347 IGKVIGWAPQIAVL---AHPAIGGFVSHCGW---------NSTLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIK 414 (485)
Q Consensus 347 ~~~v~~~~pq~~vL---~h~~~~~~itHgG~---------~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~ 414 (485)
|+.+.+|+|+.++. ..++.+++..-+.+ +-+.|++++|+|+|+.+ ...++..+.+. |+|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC
Confidence 68899999998754 44456555422322 34789999999999865 44566666665 9998763
Q ss_pred ecccccccccCCcccCHHHHHHHHHHHhcCC--hHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHH
Q 045029 415 MDYRNDIMIENPTVVNAEVIERGIRCLMEHN--SEMRKRVKEMSEKARKALSDGGSSFSSMGRLIDDF 480 (485)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~l~~av~~vl~~~--~~~r~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~ 480 (485)
+.+++.+++.++.. + .+|++|+++.++.+++ |-.....+.+.+.++
T Consensus 290 ---------------~~~e~~~~i~~l~~-~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 290 ---------------DVEEAIMKVKNVNE-DEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQA 337 (339)
T ss_dssp ---------------SHHHHHHHHHHCCH-HHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHHH
T ss_pred ---------------CHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHh
Confidence 35788888887654 3 3688888888887664 455556666666554
No 48
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=97.03 E-value=0.0034 Score=60.79 Aligned_cols=92 Identities=16% Similarity=0.163 Sum_probs=62.4
Q ss_pred cceEeecch-hhhhccCCcccccc---c--cCchhhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEeeecccccc
Q 045029 348 GKVIGWAPQ-IAVLAHPAIGGFVS---H--CGWNSTLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYRNDI 421 (485)
Q Consensus 348 ~~v~~~~pq-~~vL~h~~~~~~it---H--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~~ 421 (485)
+++.++..+ ..+++.+++ |+. . +|-.+++||+++|+|+|+-|..++.......+.+. |.++...
T Consensus 262 v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~~------- 331 (374)
T 2xci_A 262 VILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEVK------- 331 (374)
T ss_dssp EEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEECC-------
T ss_pred EEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEeC-------
Confidence 444454432 347777776 543 1 23478999999999999877777777766554454 7776542
Q ss_pred cccCCcccCHHHHHHHHHHHhcCCh---HHHHHHHHHHHH
Q 045029 422 MIENPTVVNAEVIERGIRCLMEHNS---EMRKRVKEMSEK 458 (485)
Q Consensus 422 ~~~~~~~~~~~~l~~av~~vl~~~~---~~r~~a~~~~~~ 458 (485)
+.++++++|.++++ |. +|.+++++..+.
T Consensus 332 --------d~~~La~ai~~ll~-d~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 332 --------NETELVTKLTELLS-VKKEIKVEEKSREIKGC 362 (374)
T ss_dssp --------SHHHHHHHHHHHHH-SCCCCCHHHHHHHHHHH
T ss_pred --------CHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHh
Confidence 57899999999998 43 466666665544
No 49
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=96.86 E-value=0.009 Score=58.40 Aligned_cols=83 Identities=7% Similarity=-0.049 Sum_probs=53.1
Q ss_pred cceEeecchhh---hhccCCccccccc--cCchhhHHHHhhCCcEeeccccccchhhHHHHHHhhce-------------
Q 045029 348 GKVIGWAPQIA---VLAHPAIGGFVSH--CGWNSTLESIWFGVPIATWPMYAEQQFNAFELVVELGL------------- 409 (485)
Q Consensus 348 ~~v~~~~pq~~---vL~h~~~~~~itH--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~------------- 409 (485)
+.+.+|+|+.+ ++..+++-++-+. |.-++++||+++|+|+|+.... ... .+... |.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~-e~v~~-~~~~~i~~~~~~~~~ 329 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GAD-DYFSG-DCVYKIKPSAWISVD 329 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHH-HHSCT-TTSEEECCCEEEECT
T ss_pred eeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChH-HHHcc-Ccccccccccccccc
Confidence 44558998544 6778888333232 3345899999999999997543 222 22322 32
Q ss_pred ---eE--EeeecccccccccCCcccCHHHHHHHHHHHhcCChHHHHH
Q 045029 410 ---AV--EIKMDYRNDIMIENPTVVNAEVIERGIRCLMEHNSEMRKR 451 (485)
Q Consensus 410 ---G~--~l~~~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~r~~ 451 (485)
|+ .+. .-+.++++++| ++++ |++.+++
T Consensus 330 ~~~G~~gl~~-------------~~d~~~la~~i-~l~~-~~~~~~~ 361 (413)
T 3oy2_A 330 DRDGIGGIEG-------------IIDVDDLVEAF-TFFK-DEKNRKE 361 (413)
T ss_dssp TTCSSCCEEE-------------ECCHHHHHHHH-HHTT-SHHHHHH
T ss_pred cccCcceeeC-------------CCCHHHHHHHH-HHhc-CHHHHHH
Confidence 44 443 23789999999 9999 6655443
No 50
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=96.84 E-value=0.075 Score=50.68 Aligned_cols=107 Identities=12% Similarity=0.066 Sum_probs=66.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcCCCCCchhhhhhhhhhccCCCCCeE-EEECCCCCCCCCCC
Q 045029 2 KKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMKLPHDNTVATYTQSLAASNLSSRIK-FINLPDDQPDKEST 80 (485)
Q Consensus 2 ~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-f~~l~~~~~~~~~~ 80 (485)
...||+++-..+.|++.-...+.+.|+++=.+.+|++++.+ .+.+.+. ..+.++ ++.++...
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~--------~~~~l~~---~~p~vd~vi~~~~~~------ 69 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDE--------KLQQVME---YNPNIDELIVVDKKG------ 69 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEG--------GGGGGTS---SCTTCSEEEEECCSS------
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECc--------chhHHHh---cCCCccEEEEeCccc------
Confidence 34689999999999999999999999998334558899876 3333332 234453 55443221
Q ss_pred ChHhHHHHHHHhhhhhHHHHHHhhhhcCCCCCCc-cEEEECCCchhHHHHHHHcCCCeEE
Q 045029 81 PPKRFFGHFVESKKPHVKEVVANLTDESPDSPRL-AGFVLDMFCTCMIEVADEFKVPSYL 139 (485)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~-D~vI~D~~~~~~~~~A~~lgiP~v~ 139 (485)
....+. .+...+..+.+. ++ |++|.=....-...++...|+|..+
T Consensus 70 -~~~~~~--------~~~~l~~~Lr~~-----~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 70 -RHNSIS--------GLNEVAREINAK-----GKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp -HHHHHH--------HHHHHHHHHHHH-----CCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred -ccccHH--------HHHHHHHHHhhC-----CCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 111111 122344555444 88 9888543344455678888999655
No 51
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.25 E-value=0.47 Score=44.80 Aligned_cols=105 Identities=12% Similarity=0.052 Sum_probs=61.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcCCCCCchhhhhhhhhhccCCCCCe-EEEECCCCCCCCCCCCh
Q 045029 4 AQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMKLPHDNTVATYTQSLAASNLSSRI-KFINLPDDQPDKESTPP 82 (485)
Q Consensus 4 ~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~f~~l~~~~~~~~~~~~ 82 (485)
+||+++...+.|++.-...+.+.|+++-.+..|++++.+ .+.+... ..+.+ +++.++... ..
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~--------~~~~l~~---~~p~i~~v~~~~~~~------~~ 63 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPA--------WCRPLLS---RMPEVNEAIPMPLGH------GA 63 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECG--------GGHHHHT---TCTTEEEEEEC------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECc--------chhHHHh---cCCccCEEEEecCCc------cc
Confidence 379999998889999999999999987333458899876 3333222 12344 444443211 00
Q ss_pred HhHHHHHHHhhhhhHHHHHHhhhhcCCCCCCccEEEECCC-chhHHHHHHHcCCCeEEE
Q 045029 83 KRFFGHFVESKKPHVKEVVANLTDESPDSPRLAGFVLDMF-CTCMIEVADEFKVPSYLF 140 (485)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~D~vI~D~~-~~~~~~~A~~lgiP~v~~ 140 (485)
. ....+....+.+.+ .++|++| |.. ..-...++...|+|..+.
T Consensus 64 -~--------~~~~~~~l~~~l~~-----~~~D~vi-d~~~~~~sa~~~~~~~~~~~ig 107 (348)
T 1psw_A 64 -L--------EIGERRKLGHSLRE-----KRYDRAY-VLPNSFKSALVPLFAGIPHRTG 107 (348)
T ss_dssp ----------CHHHHHHHHHHTTT-----TTCSEEE-ECSCCSGGGHHHHHTTCSEEEE
T ss_pred -c--------chHHHHHHHHHHHh-----cCCCEEE-ECCCChHHHHHHHHhCCCEEec
Confidence 0 01122344455543 4899988 332 234456778889997443
No 52
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=96.19 E-value=0.032 Score=55.79 Aligned_cols=85 Identities=13% Similarity=0.115 Sum_probs=56.3
Q ss_pred CCcc-eEeecchh--hhhccCCcccccc--c--cCchhhHHHHhhCCcEeeccccccchhhHHHHHHhh---------ce
Q 045029 346 NIGK-VIGWAPQI--AVLAHPAIGGFVS--H--CGWNSTLESIWFGVPIATWPMYAEQQFNAFELVVEL---------GL 409 (485)
Q Consensus 346 ~~~~-v~~~~pq~--~vL~h~~~~~~it--H--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~---------g~ 409 (485)
+++. +.++.... .++..+++ ||. . |--++++||+++|+|+|+.... ... .++..- +.
T Consensus 346 ~~v~~~~g~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~g----g~~-e~v~~~~~~~~~~~~~~ 418 (485)
T 1rzu_A 346 GRVGVAIGYNEPLSHLMQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVARTG----GLA-DTVIDANHAALASKAAT 418 (485)
T ss_dssp TTEEEEESCCHHHHHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHH-HHCCBCCHHHHHTTCCC
T ss_pred CcEEEecCCCHHHHHHHHhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCCC----Chh-heecccccccccccCCc
Confidence 5676 56773332 57888888 652 2 3345899999999999997653 222 223331 36
Q ss_pred eEEeeecccccccccCCcccCHHHHHHHHHHHh---cCChHHHHH
Q 045029 410 AVEIKMDYRNDIMIENPTVVNAEVIERGIRCLM---EHNSEMRKR 451 (485)
Q Consensus 410 G~~l~~~~~~~~~~~~~~~~~~~~l~~av~~vl---~~~~~~r~~ 451 (485)
|+.++ .-+.++++++|.+++ + |++.+++
T Consensus 419 G~l~~-------------~~d~~~la~~i~~ll~~~~-~~~~~~~ 449 (485)
T 1rzu_A 419 GVQFS-------------PVTLDGLKQAIRRTVRYYH-DPKLWTQ 449 (485)
T ss_dssp BEEES-------------SCSHHHHHHHHHHHHHHHT-CHHHHHH
T ss_pred ceEeC-------------CCCHHHHHHHHHHHHHHhC-CHHHHHH
Confidence 77664 347899999999999 6 6654443
No 53
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=96.18 E-value=0.054 Score=54.09 Aligned_cols=85 Identities=13% Similarity=0.049 Sum_probs=56.2
Q ss_pred CCcc-eEeecch--hhhhccCCcccccc--c--cCchhhHHHHhhCCcEeeccccccchhhHHHHHHhh---------ce
Q 045029 346 NIGK-VIGWAPQ--IAVLAHPAIGGFVS--H--CGWNSTLESIWFGVPIATWPMYAEQQFNAFELVVEL---------GL 409 (485)
Q Consensus 346 ~~~~-v~~~~pq--~~vL~h~~~~~~it--H--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~---------g~ 409 (485)
+++. +.++... ..++..+++ ||. . |.-++++||+++|+|+|+.... .+. .++..- +.
T Consensus 347 ~~v~~~~g~~~~~~~~~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~g----g~~-e~v~~~~~~~~~~~~~~ 419 (485)
T 2qzs_A 347 GQVGVQIGYHEAFSHRIMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRTG----GLA-DTVSDCSLENLADGVAS 419 (485)
T ss_dssp TTEEEEESCCHHHHHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHH-HHCCBCCHHHHHTTCCC
T ss_pred CcEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCCC----Ccc-ceeccCccccccccccc
Confidence 5665 5677433 257888888 552 2 3345788999999999998653 222 233331 36
Q ss_pred eEEeeecccccccccCCcccCHHHHHHHHHHHh---cCChHHHHH
Q 045029 410 AVEIKMDYRNDIMIENPTVVNAEVIERGIRCLM---EHNSEMRKR 451 (485)
Q Consensus 410 G~~l~~~~~~~~~~~~~~~~~~~~l~~av~~vl---~~~~~~r~~ 451 (485)
|+.++ .-+.++++++|.+++ + |++.+++
T Consensus 420 G~l~~-------------~~d~~~la~~i~~ll~~~~-~~~~~~~ 450 (485)
T 2qzs_A 420 GFVFE-------------DSNAWSLLRAIRRAFVLWS-RPSLWRF 450 (485)
T ss_dssp BEEEC-------------SSSHHHHHHHHHHHHHHHT-SHHHHHH
T ss_pred eEEEC-------------CCCHHHHHHHHHHHHHHcC-CHHHHHH
Confidence 77665 347899999999999 5 6655444
No 54
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=95.65 E-value=0.011 Score=57.88 Aligned_cols=86 Identities=20% Similarity=0.120 Sum_probs=55.4
Q ss_pred CCcceEeecchhh---hhccCCccccccc-cCc-hhhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEeeeccccc
Q 045029 346 NIGKVIGWAPQIA---VLAHPAIGGFVSH-CGW-NSTLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYRND 420 (485)
Q Consensus 346 ~~~~v~~~~pq~~---vL~h~~~~~~itH-gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~ 420 (485)
+++.+.+++|+.+ +++.+++-++-+. =|. ++++||+++|+|+|+ -..+- . .+++.-..|+.++
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g~-~----e~v~~~~~G~lv~------ 362 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVIT-NKYEN-K----DLSNWHSNIVSLE------ 362 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEE-ECBTT-B----CGGGTBTTEEEES------
T ss_pred CcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEE-eCCCc-c----hhhhcCCCEEEeC------
Confidence 4578889998664 6778888333333 133 467999999999998 33321 1 2234314677665
Q ss_pred ccccCCcccCHHHHHHHHHHHhcCChHHHHH
Q 045029 421 IMIENPTVVNAEVIERGIRCLMEHNSEMRKR 451 (485)
Q Consensus 421 ~~~~~~~~~~~~~l~~av~~vl~~~~~~r~~ 451 (485)
.-+.++++++|.++++ |++.+++
T Consensus 363 -------~~d~~~la~ai~~ll~-~~~~~~~ 385 (413)
T 2x0d_A 363 -------QLNPENIAETLVELCM-SFNNRDV 385 (413)
T ss_dssp -------SCSHHHHHHHHHHHHH-HTC----
T ss_pred -------CCCHHHHHHHHHHHHc-CHHHHHH
Confidence 3478999999999998 5655554
No 55
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=91.76 E-value=0.13 Score=50.08 Aligned_cols=77 Identities=17% Similarity=0.048 Sum_probs=55.3
Q ss_pred CCcceEeecchhh---hhccCCcccccc-ccCc-hhhHHHH-------hhCCcEeeccccccchhhHHHHHHhhceeEE-
Q 045029 346 NIGKVIGWAPQIA---VLAHPAIGGFVS-HCGW-NSTLESI-------WFGVPIATWPMYAEQQFNAFELVVELGLAVE- 412 (485)
Q Consensus 346 ~~~~v~~~~pq~~---vL~h~~~~~~it-HgG~-~s~~eal-------~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~- 412 (485)
+++.+.+++|+.+ ++..+++-++-+ +-|+ ++++||+ ++|+|+|+-.. +... ..|..
T Consensus 265 ~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G~l~ 333 (406)
T 2hy7_A 265 DNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKSRFG 333 (406)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSSEEE
T ss_pred CCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cceEEE
Confidence 5688899998654 677888833333 2344 5688999 99999999755 3333 55766
Q ss_pred eeecccccccccCCcccCHHHHHHHHHHHhcCChH
Q 045029 413 IKMDYRNDIMIENPTVVNAEVIERGIRCLMEHNSE 447 (485)
Q Consensus 413 l~~~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~ 447 (485)
++ .-+.++++++|.++++ +++
T Consensus 334 v~-------------~~d~~~la~ai~~ll~-~~~ 354 (406)
T 2hy7_A 334 YT-------------PGNADSVIAAITQALE-APR 354 (406)
T ss_dssp EC-------------TTCHHHHHHHHHHHHH-CCC
T ss_pred eC-------------CCCHHHHHHHHHHHHh-Ccc
Confidence 54 3478999999999998 443
No 56
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=87.55 E-value=1.2 Score=45.08 Aligned_cols=90 Identities=6% Similarity=-0.025 Sum_probs=50.0
Q ss_pred hcCCcceEeecchh---hhhccCCccccccc---cCc-hhhHHHHhhCCcEeeccccccchhhHHHHHHhhceeEEeeec
Q 045029 344 TANIGKVIGWAPQI---AVLAHPAIGGFVSH---CGW-NSTLESIWFGVPIATWPMYAEQQFNAFELVVELGLAVEIKMD 416 (485)
Q Consensus 344 ~~~~~~v~~~~pq~---~vL~h~~~~~~itH---gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~ 416 (485)
.++++.+....++. .+++.+++ ||.- =|+ .+++||+++|+|+|+-...+ ...-|.+. .-|......
T Consensus 380 ~~~~v~~~~~~~~~~~~~~~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG----~~e~V~dg-~~G~~~~~~ 452 (536)
T 3vue_A 380 YPGKVRAVVKFNAPLAHLIMAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACASTGG----LVDTVIEG-KTGFHMGRL 452 (536)
T ss_dssp STTTEEEECSCCHHHHHHHHHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSCTH----HHHHCCBT-TTEEECCCC
T ss_pred cCCceEEEEeccHHHHHHHHHhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCCCC----chheeeCC-CCccccccC
Confidence 34667777666654 36777777 6542 233 48899999999999976543 22222221 334433211
Q ss_pred ccccccccCCcccCHHHHHHHHHHHhc
Q 045029 417 YRNDIMIENPTVVNAEVIERGIRCLME 443 (485)
Q Consensus 417 ~~~~~~~~~~~~~~~~~l~~av~~vl~ 443 (485)
..++.- -...+.+.++++|+++++
T Consensus 453 ~~~g~l---~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 453 SVDCKV---VEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp CSCTTC---CCHHHHHHHHHHHHHHHH
T ss_pred CCceeE---ECCCCHHHHHHHHHHHHH
Confidence 000000 002356788999988774
No 57
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=80.03 E-value=5 Score=41.29 Aligned_cols=50 Identities=22% Similarity=0.238 Sum_probs=34.7
Q ss_pred cCCcceE---eecchh---------hhhccCCcccccc-ccCc-hhhHHHHhhCCcEeeccccc
Q 045029 345 ANIGKVI---GWAPQI---------AVLAHPAIGGFVS-HCGW-NSTLESIWFGVPIATWPMYA 394 (485)
Q Consensus 345 ~~~~~v~---~~~pq~---------~vL~h~~~~~~it-HgG~-~s~~eal~~GvP~v~~P~~~ 394 (485)
.++|+|+ .|++.. .+++.+++-+|=+ +=|+ .+.+||+++|+|+|+--..+
T Consensus 489 ~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG 552 (725)
T 3nb0_A 489 SDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSG 552 (725)
T ss_dssp TCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBH
T ss_pred CCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCC
Confidence 3566655 788764 4788888833333 2344 48999999999999976654
No 58
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=73.60 E-value=14 Score=36.58 Aligned_cols=109 Identities=9% Similarity=-0.000 Sum_probs=67.3
Q ss_pred CcceEeecchhh---hhccCCcccccc---ccCchh-hHHHHhhC---CcEeeccccccchhhHHHHHHhhceeEEeeec
Q 045029 347 IGKVIGWAPQIA---VLAHPAIGGFVS---HCGWNS-TLESIWFG---VPIATWPMYAEQQFNAFELVVELGLAVEIKMD 416 (485)
Q Consensus 347 ~~~v~~~~pq~~---vL~h~~~~~~it---HgG~~s-~~eal~~G---vP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~ 416 (485)
.+.+.+.+|+.+ ++..+++ |+. .=|+|- .+|++++| .|+|+--+.+ .+..+ . .-|+.++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l-~--~~allVn-- 421 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVL-G--EYCRSVN-- 421 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHH-G--GGSEEEC--
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHh-C--CCEEEEC--
Confidence 456667787744 5556666 543 568885 58999996 6666554433 22121 1 2466665
Q ss_pred ccccccccCCcccCHHHHHHHHHHHhcCCh-HHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhh
Q 045029 417 YRNDIMIENPTVVNAEVIERGIRCLMEHNS-EMRKRVKEMSEKARKALSDGGSSFSSMGRLIDDFLD 482 (485)
Q Consensus 417 ~~~~~~~~~~~~~~~~~l~~av~~vl~~~~-~~r~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~ 482 (485)
.-+.++++++|.++|+..+ +-+++.+++.+.+++ -+...=.++|+++|.+
T Consensus 422 -----------P~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 422 -----------PFDLVEQAEAISAALAAGPRQRAEAAARRRDAARP-----WTLEAWVQAQLDGLAA 472 (496)
T ss_dssp -----------TTBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHHH
T ss_pred -----------CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHhh
Confidence 3578999999999998332 455555555555433 3455666777776653
No 59
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=71.91 E-value=16 Score=36.08 Aligned_cols=104 Identities=10% Similarity=-0.027 Sum_probs=64.4
Q ss_pred Eeecchhh---hhccCCcccccc---ccCch-hhHHHHhhCC-----cEeeccccccchhhHHHHHHhhceeEEeeeccc
Q 045029 351 IGWAPQIA---VLAHPAIGGFVS---HCGWN-STLESIWFGV-----PIATWPMYAEQQFNAFELVVELGLAVEIKMDYR 418 (485)
Q Consensus 351 ~~~~pq~~---vL~h~~~~~~it---HgG~~-s~~eal~~Gv-----P~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~ 418 (485)
.+++++.+ ++..+++ ||. .=|+| +++||+++|+ |+|+--+.+--... .-|+.++
T Consensus 337 ~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l--------~~g~lv~---- 402 (482)
T 1uqt_A 337 NQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL--------TSALIVN---- 402 (482)
T ss_dssp CSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC--------TTSEEEC----
T ss_pred CCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHh--------CCeEEEC----
Confidence 47777765 5666777 653 44665 7899999998 77776544322111 1355554
Q ss_pred ccccccCCcccCHHHHHHHHHHHhcCChH-HHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHhh
Q 045029 419 NDIMIENPTVVNAEVIERGIRCLMEHNSE-MRKRVKEMSEKARKALSDGGSSFSSMGRLIDDFLD 482 (485)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~av~~vl~~~~~-~r~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~ 482 (485)
.-+.++++++|.++|+.+++ .+++.++..+.+++ -+...-.+++++.+.+
T Consensus 403 ---------p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~ 453 (482)
T 1uqt_A 403 ---------PYDRDEVAAALDRALTMSLAERISRHAEMLDVIVK-----NDINHWQECFISDLKQ 453 (482)
T ss_dssp ---------TTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHH
T ss_pred ---------CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHh
Confidence 34789999999999984333 34444444444433 2455666677776654
No 60
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=63.59 E-value=3.7 Score=41.36 Aligned_cols=37 Identities=19% Similarity=0.345 Sum_probs=27.1
Q ss_pred CcEEEEEcC--------CCccCHHHHHHHHHHHHhCCCCeEEEEEEcCC
Q 045029 3 KAQLVFIPS--------PGAGHLVSTVEVARLLVDRDDRLSVTVLIMKL 43 (485)
Q Consensus 3 ~~~i~~~~~--------~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~ 43 (485)
++||+|++. |+.|++ .-+|+++|+++||+ |++++|..
T Consensus 9 ~MkIl~vs~E~~P~~K~GGLadv--v~~L~~aL~~~G~~--V~Vi~P~Y 53 (536)
T 3vue_A 9 HMNVVFVGAEMAPWSKTGGLGDV--LGGLPPAMAANGHR--VMVISPRY 53 (536)
T ss_dssp CCEEEEECSCBTTTBCSSHHHHH--HHHHHHHHHTTTCE--EEEEEECC
T ss_pred CcEEEEEEEeccchhccCcHHHH--HHHHHHHHHHcCCe--EEEEecCc
Confidence 689999962 333444 55789999999999 55777654
No 61
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=63.56 E-value=9 Score=30.48 Aligned_cols=38 Identities=16% Similarity=0.086 Sum_probs=34.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEE
Q 045029 1 MKKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLI 40 (485)
Q Consensus 1 m~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (485)
|++.+|++.+.+.-+|-....-++..|..+|++ |....
T Consensus 1 ~~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~--Vi~lG 38 (137)
T 1ccw_A 1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNAGFN--VVNIG 38 (137)
T ss_dssp CCCCEEEEEEETTCCCCHHHHHHHHHHHHTTCE--EEEEE
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHHHHHHCCCE--EEECC
Confidence 788899999999999999999999999999988 55554
No 62
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=61.14 E-value=9.7 Score=31.81 Aligned_cols=38 Identities=13% Similarity=0.096 Sum_probs=29.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcC
Q 045029 1 MKKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMK 42 (485)
Q Consensus 1 m~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (485)
|. .||++.-.|+.|=+. ...+.+.|+++|++ |.++.++
T Consensus 4 m~-k~IllgvTGs~aa~k-~~~ll~~L~~~g~~--V~vv~T~ 41 (175)
T 3qjg_A 4 MG-ENVLICLCGSVNSIN-ISHYIIELKSKFDE--VNVIAST 41 (175)
T ss_dssp -C-CEEEEEECSSGGGGG-HHHHHHHHTTTCSE--EEEEECT
T ss_pred CC-CEEEEEEeCHHHHHH-HHHHHHHHHHCCCE--EEEEECc
Confidence 44 478888888866665 88999999999999 5577666
No 63
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=60.94 E-value=11 Score=32.40 Aligned_cols=38 Identities=18% Similarity=0.268 Sum_probs=31.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcC
Q 045029 2 KKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMK 42 (485)
Q Consensus 2 ~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (485)
++.||++.-.|+.|-++ ...|.+.|.++|++ |.++.++
T Consensus 3 ~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~e--V~vv~T~ 40 (209)
T 3zqu_A 3 GPERITLAMTGASGAQY-GLRLLDCLVQEERE--VHFLISK 40 (209)
T ss_dssp SCSEEEEEECSSSCHHH-HHHHHHHHHHTTCE--EEEEECH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCE--EEEEECc
Confidence 35589888888877777 89999999999999 5577766
No 64
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=59.53 E-value=7 Score=31.58 Aligned_cols=34 Identities=21% Similarity=0.260 Sum_probs=26.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEc
Q 045029 1 MKKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIM 41 (485)
Q Consensus 1 m~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~ 41 (485)
|++.|++++-. |++- ..+++.|.++||+ |+++..
T Consensus 1 ~~~~~vlI~G~---G~vG--~~la~~L~~~g~~--V~vid~ 34 (153)
T 1id1_A 1 HRKDHFIVCGH---SILA--INTILQLNQRGQN--VTVISN 34 (153)
T ss_dssp CCCSCEEEECC---SHHH--HHHHHHHHHTTCC--EEEEEC
T ss_pred CCCCcEEEECC---CHHH--HHHHHHHHHCCCC--EEEEEC
Confidence 78889999854 4443 6899999999999 667754
No 65
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=58.45 E-value=14 Score=34.05 Aligned_cols=39 Identities=5% Similarity=0.130 Sum_probs=33.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcC
Q 045029 4 AQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMK 42 (485)
Q Consensus 4 ~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (485)
+||+++-..+-|++.-...+.+.|+++-.+..|++++.+
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~ 39 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEE 39 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEG
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEeh
Confidence 379999999999999999999999998545668899876
No 66
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=58.32 E-value=4.6 Score=39.10 Aligned_cols=38 Identities=5% Similarity=0.183 Sum_probs=28.2
Q ss_pred CcEEEEEcCCCc-----cCHHHHHHHHHHHHhCCCCeEEEEEEcC
Q 045029 3 KAQLVFIPSPGA-----GHLVSTVEVARLLVDRDDRLSVTVLIMK 42 (485)
Q Consensus 3 ~~~i~~~~~~~~-----GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (485)
++||+++..... |=......+|++|+++||+ |+++++.
T Consensus 46 ~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~Ghe--V~Vvt~~ 88 (413)
T 2x0d_A 46 GKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFK--KRIILTD 88 (413)
T ss_dssp SCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCE--EEEEESS
T ss_pred CceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCc--eEEEEec
Confidence 568888875422 3335688999999999999 6688765
No 67
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=57.79 E-value=37 Score=32.43 Aligned_cols=35 Identities=6% Similarity=0.034 Sum_probs=22.4
Q ss_pred CcEEEEEc---CCCccCHHHHHHHHHHHHhCCCCeEEEEEEc
Q 045029 3 KAQLVFIP---SPGAGHLVSTVEVARLLVDRDDRLSVTVLIM 41 (485)
Q Consensus 3 ~~~i~~~~---~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~ 41 (485)
++||++++ +| .+.-.-...+++.|+++| + |++++.
T Consensus 14 ~MkIl~is~~~~p-~~~~~~~~~l~~~l~~~G-~--V~vi~~ 51 (406)
T 2hy7_A 14 RPCYLVLSSHDFR-TPRRANIHFITDQLALRG-T--TRFFSL 51 (406)
T ss_dssp CSCEEEEESSCTT-SSSCCHHHHHHHHHHHHS-C--EEEEEC
T ss_pred CceEEEEecccCC-ChhhhhHhHHHHHHHhCC-c--eEEEEe
Confidence 46788887 44 222222345788999999 9 667754
No 68
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=53.91 E-value=19 Score=30.31 Aligned_cols=52 Identities=8% Similarity=0.107 Sum_probs=35.3
Q ss_pred ccCHHHHHHHHHHHhcCCh------HHHHHHHHHHHHHHH----hhhcCCChHHHHHHHHHHH
Q 045029 428 VVNAEVIERGIRCLMEHNS------EMRKRVKEMSEKARK----ALSDGGSSFSSMGRLIDDF 480 (485)
Q Consensus 428 ~~~~~~l~~av~~vl~~~~------~~r~~a~~~~~~~~~----~~~~gg~~~~~~~~~~~~~ 480 (485)
.+|+++|.++|+++++.+. .|+ |...+-..+|+ -|.+|..-...+++-+-++
T Consensus 116 ~VT~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWAd~~~vK~~vD~~~l~l 177 (187)
T 3tl4_X 116 EITEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWADPRSFKPIIDQEVLKL 177 (187)
T ss_dssp CCCHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTSCTTSHHHHHHHHHHHH
T ss_pred EeCHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHH
Confidence 4689999999999997442 456 77777776665 2456666666666554444
No 69
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=52.68 E-value=40 Score=29.89 Aligned_cols=35 Identities=14% Similarity=0.148 Sum_probs=21.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcCC
Q 045029 5 QLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMKL 43 (485)
Q Consensus 5 ~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~ 43 (485)
||++.-=-+. +--=+..|++.|.+.| + |+++.+..
T Consensus 3 ~ILlTNDDGi-~apGi~~L~~~l~~~g-~--V~VvAP~~ 37 (251)
T 2wqk_A 3 TFLLVNDDGY-FSPGINALREALKSLG-R--VVVVAPDR 37 (251)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTTTS-E--EEEEEESS
T ss_pred EEEEEcCCCC-CcHHHHHHHHHHHhCC-C--EEEEeeCC
Confidence 4555543332 2334667899999998 4 66777663
No 70
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=52.35 E-value=96 Score=30.05 Aligned_cols=37 Identities=22% Similarity=0.381 Sum_probs=31.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcC
Q 045029 4 AQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMK 42 (485)
Q Consensus 4 ~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (485)
..|+++..++.|-..-...||..|+++|+. |.++..+
T Consensus 101 ~vIlivG~~G~GKTTt~~kLA~~l~~~G~k--Vllv~~D 137 (443)
T 3dm5_A 101 TILLMVGIQGSGKTTTVAKLARYFQKRGYK--VGVVCSD 137 (443)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHTTTCC--EEEEECC
T ss_pred eEEEEECcCCCCHHHHHHHHHHHHHHCCCe--EEEEeCC
Confidence 367788888999999999999999999998 5566655
No 71
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=51.87 E-value=30 Score=23.79 Aligned_cols=54 Identities=9% Similarity=0.130 Sum_probs=31.3
Q ss_pred ccCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHhh-hcCCChH-HHHHHHHHHHh
Q 045029 428 VVNAEVIERGIRCLMEHNSEMRKRVKEMSEKARKAL-SDGGSSF-SSMGRLIDDFL 481 (485)
Q Consensus 428 ~~~~~~l~~av~~vl~~~~~~r~~a~~~~~~~~~~~-~~gg~~~-~~~~~~~~~~~ 481 (485)
..|.++|.++|+++|..-.-..--.+.+++.+.+.. +-.=++. ..|...|+.++
T Consensus 11 ~Psd~ei~~~I~~IL~~aDL~tvT~K~VR~~Le~~~pg~dLs~kK~~I~~~I~~~L 66 (70)
T 1q1v_A 11 PPTDEELKETIKKLLASANLEEVTMKQICKKVYENYPTYDLTERKDFIKTTVKELI 66 (70)
T ss_dssp CCCHHHHHHHHHHHHTTSCGGGCCHHHHHHHHHHHCSSSCCSHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHccCCCChHHHHHHHHHHHHHH
Confidence 689999999999999842211122244666665554 3222222 35666666554
No 72
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=50.00 E-value=92 Score=25.78 Aligned_cols=44 Identities=14% Similarity=0.001 Sum_probs=27.9
Q ss_pred eEeecchhh-hhccCCccccccccCchhhHHH---HhhCCcEeecccc
Q 045029 350 VIGWAPQIA-VLAHPAIGGFVSHCGWNSTLES---IWFGVPIATWPMY 393 (485)
Q Consensus 350 v~~~~pq~~-vL~h~~~~~~itHgG~~s~~ea---l~~GvP~v~~P~~ 393 (485)
+++..++.- ++..-+-..++--||.||+.|+ +.+++|++++|.+
T Consensus 93 ~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 93 VTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp ECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred EcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 344444332 3333333345667899987655 6799999999984
No 73
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=49.74 E-value=21 Score=33.17 Aligned_cols=73 Identities=11% Similarity=0.165 Sum_probs=51.3
Q ss_pred CHHHHHHHHHHHHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchhhhhccCCccccccc
Q 045029 292 GEDQVKEIACALEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQIAVLAHPAIGGFVSH 371 (485)
Q Consensus 292 ~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~vL~h~~~~~~itH 371 (485)
+.+...++.+++....++.||.++++. +-.++.++++...+-++|+. ||=+
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~---------------------------g~~rlL~~lD~~~i~~~PK~--~~Gy 113 (331)
T 4e5s_A 63 ISSRVQDLHEAFRDPNVKAILTTLGGY---------------------------NSNGLLKYLDYDLIRENPKF--FCGY 113 (331)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCS---------------------------CGGGGGGGCCHHHHHTSCCE--EEEC
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccc---------------------------cHHHHHhhcChhHHHhCCeE--EEEe
Confidence 445688899999999999999998773 11345556666666566766 7777
Q ss_pred cCchhhHHHHh--hCCcEeecccc
Q 045029 372 CGWNSTLESIW--FGVPIATWPMY 393 (485)
Q Consensus 372 gG~~s~~eal~--~GvP~v~~P~~ 393 (485)
.-...++-+++ .|+..+--|+.
T Consensus 114 SDiTaL~~al~~~~G~~t~hGp~~ 137 (331)
T 4e5s_A 114 SDITALNNAIYTKTGLVTYSGPHF 137 (331)
T ss_dssp GGGHHHHHHHHHHHCBCEEECCCG
T ss_pred cchHHHHHHHHHhhCCcEEEccch
Confidence 66666766766 47777766653
No 74
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=49.70 E-value=13 Score=36.52 Aligned_cols=37 Identities=16% Similarity=0.082 Sum_probs=27.2
Q ss_pred cEEEEEcCC------CccCHHHHHHHHHHHHhCCCCeEEEEEEcC
Q 045029 4 AQLVFIPSP------GAGHLVSTVEVARLLVDRDDRLSVTVLIMK 42 (485)
Q Consensus 4 ~~i~~~~~~------~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (485)
+||++++.. ..|=-.-...|++.|+++||+ |+++++.
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~--V~vi~~~ 43 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVR--TRTLIPG 43 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCE--EEEEEEC
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCe--EEEEecc
Confidence 368887652 345557788999999999999 5577653
No 75
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=48.63 E-value=14 Score=36.25 Aligned_cols=37 Identities=14% Similarity=0.072 Sum_probs=26.8
Q ss_pred cEEEEEcCC------CccCHHHHHHHHHHHHhCCCCeEEEEEEcC
Q 045029 4 AQLVFIPSP------GAGHLVSTVEVARLLVDRDDRLSVTVLIMK 42 (485)
Q Consensus 4 ~~i~~~~~~------~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (485)
+||++++.. ..|=-.-...|++.|+++||+ |+++++.
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~--V~vi~~~ 43 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVD--ARVLLPA 43 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCE--EEEEEEC
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCE--EEEEecC
Confidence 368888652 234456678899999999999 6677654
No 76
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=47.87 E-value=20 Score=30.82 Aligned_cols=37 Identities=11% Similarity=0.232 Sum_probs=30.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcC
Q 045029 2 KKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMK 42 (485)
Q Consensus 2 ~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (485)
++.||++.-.|+.+-+. ...|.+.|.++| + |.++.++
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~--V~vv~T~ 54 (209)
T 1mvl_A 18 RKPRVLLAASGSVAAIK-FGNLCHCFTEWA-E--VRAVVTK 54 (209)
T ss_dssp -CCEEEEEECSSGGGGG-HHHHHHHHHTTS-E--EEEEECT
T ss_pred CCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-C--EEEEEcc
Confidence 45689999999988776 899999999999 8 5577666
No 77
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=47.17 E-value=90 Score=27.75 Aligned_cols=34 Identities=29% Similarity=0.343 Sum_probs=22.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEE
Q 045029 1 MKKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVL 39 (485)
Q Consensus 1 m~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~ 39 (485)
|.+.|+++++.++.| --.++|+.|+++|++ |.++
T Consensus 21 m~~~k~~lVTGas~G---IG~aia~~la~~G~~--V~~~ 54 (279)
T 3sju_A 21 MSRPQTAFVTGVSSG---IGLAVARTLAARGIA--VYGC 54 (279)
T ss_dssp ----CEEEEESTTSH---HHHHHHHHHHHTTCE--EEEE
T ss_pred ccCCCEEEEeCCCCH---HHHHHHHHHHHCCCE--EEEE
Confidence 334467788877654 456899999999988 4444
No 78
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=46.73 E-value=1e+02 Score=29.50 Aligned_cols=138 Identities=12% Similarity=0.075 Sum_probs=77.2
Q ss_pred CcEEEEeecCcccCCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchh
Q 045029 278 SSVVFLCFGSWGSFGEDQVKEIACALEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQI 357 (485)
Q Consensus 278 ~~~vyvs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~ 357 (485)
.+.|-|-+||. .+....++++..|+..|.++=.-+-+. ...|+... .++-+-
T Consensus 265 ~~~V~Ii~gs~--SD~~~~~~a~~~l~~~gi~~~v~V~sa----------------HR~p~~~~----------~~~~~~ 316 (425)
T 2h31_A 265 QCRVVVLMGST--SDLGHCEKIKKACGNFGIPCELRVTSA----------------HKGPDETL----------RIKAEY 316 (425)
T ss_dssp CCEEEEEESCG--GGHHHHHHHHHHHHHTTCCEEEEECCT----------------TTCHHHHH----------HHHHHH
T ss_pred CCeEEEEecCc--ccHHHHHHHHHHHHHcCCceEEeeeec----------------cCCHHHHH----------HHHHHH
Confidence 35777888884 366778888899999998865444332 23454321 122111
Q ss_pred hhhccC-CccccccccCch----hhHHHHhhCCcEeeccccccchhhH--HHHH--H--hhceeEEeeecccccccccCC
Q 045029 358 AVLAHP-AIGGFVSHCGWN----STLESIWFGVPIATWPMYAEQQFNA--FELV--V--ELGLAVEIKMDYRNDIMIENP 426 (485)
Q Consensus 358 ~vL~h~-~~~~~itHgG~~----s~~eal~~GvP~v~~P~~~DQ~~na--~r~~--~--~~g~G~~l~~~~~~~~~~~~~ 426 (485)
.- ... .| +|.=+|.- ++..++ .-+|+|.+|... ..++ ..+. + . |+.+..-..
T Consensus 317 ~~-~g~~~v--iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~--~~~G~daLls~vqmp~-g~pvatv~~---------- 379 (425)
T 2h31_A 317 EG-DGIPTV--FVAVAGRSNGLGPVMSGN-TAYPVISCPPLT--PDWGVQDVWSSLRLPS-GLGCSTVLS---------- 379 (425)
T ss_dssp HT-TCCCEE--EEEECCSSCCHHHHHHHH-CSSCEEECCCCC--TTTHHHHGGGTSSCCS-SCCCEECCC----------
T ss_pred HH-CCCCeE--EEEEcCcccchHhHHhcc-CCCCEEEeeCcc--ccccHHHHHHHhcCCC-CCceEEecC----------
Confidence 10 112 24 77766653 444443 478999999852 2222 1211 2 2 444332111
Q ss_pred cccCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHhh
Q 045029 427 TVVNAEVIERGIRCLMEHNSEMRKRVKEMSEKARKAL 463 (485)
Q Consensus 427 ~~~~~~~l~~av~~vl~~~~~~r~~a~~~~~~~~~~~ 463 (485)
..++.-++..|. -+. |++++++.+..+...+..+
T Consensus 380 -~~nAa~~A~~Il-~~~-~~~l~~kl~~~~~~~~~~v 413 (425)
T 2h31_A 380 -PEGSAQFAAQIF-GLS-NHLVWSKLRASILNTWISL 413 (425)
T ss_dssp -HHHHHHHHHHHH-HTT-CHHHHHHHHHHHHHHHHHH
T ss_pred -chHHHHHHHHHH-ccC-CHHHHHHHHHHHHHHHHHH
Confidence 345666666664 335 6788888888877776654
No 79
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=46.61 E-value=21 Score=29.93 Aligned_cols=38 Identities=16% Similarity=0.155 Sum_probs=28.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcC
Q 045029 1 MKKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMK 42 (485)
Q Consensus 1 m~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (485)
|.| ||++.-.|+.|=+ =...+.+.|.++|++ |.++.++
T Consensus 1 ~~k-~IllgvTGs~aa~-k~~~l~~~L~~~g~~--V~vv~T~ 38 (181)
T 1g63_A 1 MYG-KLLICATASINVI-NINHYIVELKQHFDE--VNILFSP 38 (181)
T ss_dssp CCC-CEEEEECSCGGGG-GHHHHHHHHTTTSSC--EEEEECG
T ss_pred CCC-EEEEEEECHHHHH-HHHHHHHHHHHCCCE--EEEEEch
Confidence 555 6777777776555 678999999999999 4567666
No 80
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=46.03 E-value=1e+02 Score=26.94 Aligned_cols=39 Identities=10% Similarity=0.068 Sum_probs=20.4
Q ss_pred CCCcE-EEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEE
Q 045029 1 MKKAQ-LVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLI 40 (485)
Q Consensus 1 m~~~~-i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (485)
|.+.+ +++.+.|--= ..-+=.....++++|++|.|.++|
T Consensus 1 ~~~~~vL~v~aHPDDe-~l~~Ggtia~~~~~G~~V~vv~lT 40 (242)
T 2ixd_A 1 MSGLHILAFGAHADDV-EIGMAGTIAKYTKQGYEVGICDLT 40 (242)
T ss_dssp -CCCSEEEEESSTTHH-HHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCccEEEEEeCCChH-HHhHHHHHHHHHHCCCeEEEEEEc
Confidence 45443 4555555311 222223445667799998755555
No 81
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=44.97 E-value=97 Score=28.49 Aligned_cols=71 Identities=15% Similarity=0.063 Sum_probs=46.2
Q ss_pred hccCCcccccc-----ccCchhhHHHHhhCCcEeecccc-ccchhhHHHHHHh----hceeEEeeecccccccccCCccc
Q 045029 360 LAHPAIGGFVS-----HCGWNSTLESIWFGVPIATWPMY-AEQQFNAFELVVE----LGLAVEIKMDYRNDIMIENPTVV 429 (485)
Q Consensus 360 L~h~~~~~~it-----HgG~~s~~eal~~GvP~v~~P~~-~DQ~~na~r~~~~----~g~G~~l~~~~~~~~~~~~~~~~ 429 (485)
-.|..+ ||- ||||-.+.-+++.|.=++.+|-. .|....+.++.+. .+.++.+-.+ |.-
T Consensus 159 ~s~~rv--~iVEvMGR~aG~lAl~a~lA~ga~~iliPE~~~~~~~i~~~i~~~~~~gk~~~iIvvaE----------G~~ 226 (320)
T 1pfk_A 159 SSHQRI--SVVEVMGRYCGDLTLAAAIAGGCEFVVVPEVEFSREDLVNEIKAGIAKGKKHAIVAITE----------HMC 226 (320)
T ss_dssp HHHTCE--EEEEECCTTCCHHHHHHHHHTTCSEEECTTSCCCHHHHHHHHHHHHHTTCSCEEEEEES----------SSS
T ss_pred hcCCCE--EEEEeCCcCHHHHHHHHHHhcCCCEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEEeC----------Ccc
Confidence 355544 665 99999999999999999999943 3443344444332 2455555433 234
Q ss_pred CHHHHHHHHHHHh
Q 045029 430 NAEVIERGIRCLM 442 (485)
Q Consensus 430 ~~~~l~~av~~vl 442 (485)
+.+.|++.|++-+
T Consensus 227 ~~~~la~~i~~~~ 239 (320)
T 1pfk_A 227 DVDELAHFIEKET 239 (320)
T ss_dssp CHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHh
Confidence 6777888877643
No 82
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=44.07 E-value=48 Score=24.58 Aligned_cols=35 Identities=26% Similarity=0.444 Sum_probs=29.7
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHHhcCCceEEEEcCC
Q 045029 279 SVVFLCFGSWGSFGEDQVKEIACALEQSGHRFLWSLRRP 317 (485)
Q Consensus 279 ~~vyvs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~ 317 (485)
+.||+-|.| +++.+.+|.+.+.+.|++++..+...
T Consensus 2 sqifvvfss----dpeilkeivreikrqgvrvvllysdq 36 (162)
T 2l82_A 2 SQIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQ 36 (162)
T ss_dssp CEEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ceEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCc
Confidence 368888866 88999999999999999999888654
No 83
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=43.86 E-value=1.3e+02 Score=24.58 Aligned_cols=143 Identities=16% Similarity=0.172 Sum_probs=78.4
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchhh
Q 045029 279 SVVFLCFGSWGSFGEDQVKEIACALEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQIA 358 (485)
Q Consensus 279 ~~vyvs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~ 358 (485)
+.|-|-+||. .+....++....|+..|.++=..+-.. ...|+... +|+-.-.
T Consensus 7 ~~V~IimgS~--SD~~v~~~a~~~l~~~gi~~ev~V~Sa----------------HR~p~~~~----------~~~~~a~ 58 (169)
T 3trh_A 7 IFVAILMGSD--SDLSTMETAFTELKSLGIPFEAHILSA----------------HRTPKETV----------EFVENAD 58 (169)
T ss_dssp CEEEEEESCG--GGHHHHHHHHHHHHHTTCCEEEEECCT----------------TTSHHHHH----------HHHHHHH
T ss_pred CcEEEEECcH--HhHHHHHHHHHHHHHcCCCEEEEEEcc----------------cCCHHHHH----------HHHHHHH
Confidence 4566777884 366777888888888888865544433 23454322 2221111
Q ss_pred hhccCCccccccccCchhhHHHHh---hCCcEeeccccc-cchhhHHHHH--H--hhceeEE-eeecccccccccCCccc
Q 045029 359 VLAHPAIGGFVSHCGWNSTLESIW---FGVPIATWPMYA-EQQFNAFELV--V--ELGLAVE-IKMDYRNDIMIENPTVV 429 (485)
Q Consensus 359 vL~h~~~~~~itHgG~~s~~eal~---~GvP~v~~P~~~-DQ~~na~r~~--~--~~g~G~~-l~~~~~~~~~~~~~~~~ 429 (485)
-...++ ||.=.|.-.-+-++. .-+|+|.+|... +-......+. + . |+.+. +..+ +.+..
T Consensus 59 -~~g~~V--iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~-GvPVatV~I~--------~a~~~ 126 (169)
T 3trh_A 59 -NRGCAV--FIAAAGLAAHLAGTIAAHTLKPVIGVPMAGGSLGGLDALLSTVQMPG-GVPVACTAIG--------KAGAK 126 (169)
T ss_dssp -HTTEEE--EEEEECSSCCHHHHHHHTCSSCEEEEECCCSTTTTHHHHHHHHCCCT-TSCCEECCST--------HHHHH
T ss_pred -hCCCcE--EEEECChhhhhHHHHHhcCCCCEEEeecCCCCCCCHHHHHHhhcCCC-CCceEEEecC--------Cccch
Confidence 122334 887777554333333 358999999864 2212222222 2 2 54322 1111 00134
Q ss_pred CHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHhh
Q 045029 430 NAEVIERGIRCLMEHNSEMRKRVKEMSEKARKAL 463 (485)
Q Consensus 430 ~~~~l~~av~~vl~~~~~~r~~a~~~~~~~~~~~ 463 (485)
++.-++..|-.+ . |++++++.+.+++..++.+
T Consensus 127 nAa~lAa~Il~~-~-d~~l~~kl~~~r~~~~~~v 158 (169)
T 3trh_A 127 NAAILAAQIIAL-Q-DKSIAQKLVQQRTAKRETL 158 (169)
T ss_dssp HHHHHHHHHHHT-T-CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC-C-CHHHHHHHHHHHHHHHHHH
Confidence 555555555433 4 6889999999988888765
No 84
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=43.73 E-value=14 Score=31.36 Aligned_cols=38 Identities=11% Similarity=0.025 Sum_probs=30.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcC
Q 045029 2 KKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMK 42 (485)
Q Consensus 2 ~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (485)
++.||++.-.|+.|=+. ...|.+.|.++|++ |.++.++
T Consensus 7 ~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~--V~vv~T~ 44 (194)
T 1p3y_1 7 KDKKLLIGICGSISSVG-ISSYLLYFKSFFKE--IRVVMTK 44 (194)
T ss_dssp GGCEEEEEECSCGGGGG-THHHHHHHTTTSSE--EEEEECH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCE--EEEEEch
Confidence 34588888888877775 78999999999998 5567665
No 85
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=42.14 E-value=30 Score=29.42 Aligned_cols=35 Identities=14% Similarity=0.208 Sum_probs=28.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhC-CCCeEEEEEEcC
Q 045029 5 QLVFIPSPGAGHLVSTVEVARLLVDR-DDRLSVTVLIMK 42 (485)
Q Consensus 5 ~i~~~~~~~~GH~~P~l~La~~L~~r-GH~v~Vt~~~~~ 42 (485)
||++.-.|+.|-+. ...|.+.|.++ |++ |.++.++
T Consensus 2 ~IllgvTGsiaa~k-~~~ll~~L~~~~g~~--V~vv~T~ 37 (197)
T 1sbz_A 2 KLIVGMTGATGAPL-GVALLQALREMPNVE--THLVMSK 37 (197)
T ss_dssp EEEEEECSSSCHHH-HHHHHHHHHTCTTCE--EEEEECH
T ss_pred EEEEEEeChHHHHH-HHHHHHHHHhccCCE--EEEEECc
Confidence 68888888876666 89999999999 988 5577666
No 86
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=41.74 E-value=23 Score=30.28 Aligned_cols=38 Identities=13% Similarity=0.093 Sum_probs=29.8
Q ss_pred CCcEEEEEcCCCccCHH-HHHHHHHHHHhCCCCeEEEEEEcC
Q 045029 2 KKAQLVFIPSPGAGHLV-STVEVARLLVDRDDRLSVTVLIMK 42 (485)
Q Consensus 2 ~~~~i~~~~~~~~GH~~-P~l~La~~L~~rGH~v~Vt~~~~~ 42 (485)
++.||++.-.|+ +..+ =.+.|.+.|.++|++ |.++.++
T Consensus 6 ~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~e--V~vv~T~ 44 (201)
T 3lqk_A 6 AGKHVGFGLTGS-HCTYHEVLPQMERLVELGAK--VTPFVTH 44 (201)
T ss_dssp TTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCE--EEEECSS
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCE--EEEEECh
Confidence 356888888877 5555 789999999999998 5577665
No 87
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=41.28 E-value=31 Score=31.95 Aligned_cols=72 Identities=11% Similarity=0.105 Sum_probs=46.1
Q ss_pred CHHHHHHHHHHHHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchhhhhccCCccccccc
Q 045029 292 GEDQVKEIACALEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQIAVLAHPAIGGFVSH 371 (485)
Q Consensus 292 ~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~vL~h~~~~~~itH 371 (485)
+.+...++.++|....++.||..+++. +-.++.+++....+-.||+. |+=.
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~---------------------------g~~rlL~~LD~~~i~~~PK~--~~Gy 113 (327)
T 4h1h_A 63 IRSRVADIHEAFNDSSVKAILTVIGGF---------------------------NSNQLLPYLDYDLISENPKI--LCGF 113 (327)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCS---------------------------CGGGGGGGCCHHHHHHSCCE--EEEC
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCch---------------------------hHHHHhhhcchhhhccCCeE--EEec
Confidence 445688899999999999999988763 11344455555555556655 6655
Q ss_pred cCchhhHHHHh--hCCcEeeccc
Q 045029 372 CGWNSTLESIW--FGVPIATWPM 392 (485)
Q Consensus 372 gG~~s~~eal~--~GvP~v~~P~ 392 (485)
.-..+++-+++ .|+..+--|+
T Consensus 114 SDiT~L~~al~~~~g~~t~hGp~ 136 (327)
T 4h1h_A 114 SDITALATAIYTQTELITYSGAH 136 (327)
T ss_dssp TTHHHHHHHHHHHHCBCEEECCC
T ss_pred ccccHHHHHHHHhcCeEEEeCcc
Confidence 55555555554 3555554444
No 88
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=39.84 E-value=1.6e+02 Score=24.20 Aligned_cols=145 Identities=14% Similarity=0.127 Sum_probs=80.8
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchhh
Q 045029 279 SVVFLCFGSWGSFGEDQVKEIACALEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQIA 358 (485)
Q Consensus 279 ~~vyvs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~ 358 (485)
|.|-|-+||. -+....++....|+..|.++=..+-.. ...|+... +|+.+-.
T Consensus 12 ~~V~IimGS~--SD~~v~~~a~~~L~~~Gi~~dv~V~Sa----------------HR~p~~l~----------~~~~~a~ 63 (170)
T 1xmp_A 12 SLVGVIMGST--SDWETMKYACDILDELNIPYEKKVVSA----------------HRTPDYMF----------EYAETAR 63 (170)
T ss_dssp CSEEEEESSG--GGHHHHHHHHHHHHHTTCCEEEEECCT----------------TTSHHHHH----------HHHHHTT
T ss_pred CcEEEEECcH--HHHHHHHHHHHHHHHcCCCEEEEEEec----------------cCCHHHHH----------HHHHHHH
Confidence 4677778884 366778888888999998865444332 23454321 1221110
Q ss_pred hhccCCccccccccCchhhHHHHh---hCCcEeeccccccc-hhhHHH--HHH--hhceeEEe-eecccccccccCCccc
Q 045029 359 VLAHPAIGGFVSHCGWNSTLESIW---FGVPIATWPMYAEQ-QFNAFE--LVV--ELGLAVEI-KMDYRNDIMIENPTVV 429 (485)
Q Consensus 359 vL~h~~~~~~itHgG~~s~~eal~---~GvP~v~~P~~~DQ-~~na~r--~~~--~~g~G~~l-~~~~~~~~~~~~~~~~ 429 (485)
=...++ ||.=.|.-.-+-++. .-+|+|.+|..... ...... +++ . |+.+.. ..+.. +..
T Consensus 64 -~~g~~V--iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~a--------~~~ 131 (170)
T 1xmp_A 64 -ERGLKV--IIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGKA--------GST 131 (170)
T ss_dssp -TTTCCE--EEEEEESSCCHHHHHHTTCCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSHH--------HHH
T ss_pred -hCCCcE--EEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCCc--------chH
Confidence 011334 777666543333333 35899999986421 111112 234 3 554321 11100 134
Q ss_pred CHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHhhhc
Q 045029 430 NAEVIERGIRCLMEHNSEMRKRVKEMSEKARKALSD 465 (485)
Q Consensus 430 ~~~~l~~av~~vl~~~~~~r~~a~~~~~~~~~~~~~ 465 (485)
++.-++..|- -+. |++++++.+.+++..++.+.+
T Consensus 132 nAallAaqIl-a~~-d~~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 132 NAGLLAAQIL-GSF-HDDIHDALELRREAIEKDVRE 165 (170)
T ss_dssp HHHHHHHHHH-HTT-CHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHH-ccC-CHHHHHHHHHHHHHHHHHHHh
Confidence 5666666664 334 689999999999998887654
No 89
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=39.76 E-value=25 Score=30.18 Aligned_cols=38 Identities=11% Similarity=0.031 Sum_probs=29.3
Q ss_pred CCcEEEEEcCCCccCHHH-HHHHHHHHHhCCCCeEEEEEEcC
Q 045029 2 KKAQLVFIPSPGAGHLVS-TVEVARLLVDRDDRLSVTVLIMK 42 (485)
Q Consensus 2 ~~~~i~~~~~~~~GH~~P-~l~La~~L~~rGH~v~Vt~~~~~ 42 (485)
++.||++.-.|+ +..+- ...+.+.|.++|++ |.++.++
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~e--V~vv~T~ 42 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAE--VRPVVSY 42 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCE--EEEEECC
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCE--EEEEEeh
Confidence 456888888876 55665 78999999999998 5567665
No 90
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=39.59 E-value=41 Score=30.94 Aligned_cols=75 Identities=16% Similarity=0.251 Sum_probs=53.8
Q ss_pred cCCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchhhhhc-cCCcccc
Q 045029 290 SFGEDQVKEIACALEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQIAVLA-HPAIGGF 368 (485)
Q Consensus 290 ~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~vL~-h~~~~~~ 368 (485)
..+.+...++.+++....++.||..+++. +-.++.+++....+-. +|+. |
T Consensus 63 gtd~~Ra~dL~~a~~Dp~i~aI~~~rGGy---------------------------ga~rlLp~LD~~~i~~a~PK~--~ 113 (311)
T 1zl0_A 63 GTVEQRLEDLHNAFDMPDITAVWCLRGGY---------------------------GCGQLLPGLDWGRLQAASPRP--L 113 (311)
T ss_dssp SCHHHHHHHHHHHHHSTTEEEEEESCCSS---------------------------CGGGGTTTCCHHHHHHSCCCC--E
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEccCCc---------------------------CHHHHhhccchhhhhccCCCE--E
Confidence 34556688899999999999999998773 1134555666565555 7777 8
Q ss_pred ccccCchhhHHHHh-hCCcEeecccc
Q 045029 369 VSHCGWNSTLESIW-FGVPIATWPMY 393 (485)
Q Consensus 369 itHgG~~s~~eal~-~GvP~v~~P~~ 393 (485)
|=+.-...++-+++ .|++.+--|+.
T Consensus 114 iGySDiTaL~~al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 114 IGFSDISVLLSAFHRHGLPAIHGPVA 139 (311)
T ss_dssp EECGGGHHHHHHHHHTTCCEEECCCG
T ss_pred EEEchhHHHHHHHHHcCCcEEECHhh
Confidence 87777777777776 37777777754
No 91
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=38.96 E-value=1.9e+02 Score=27.46 Aligned_cols=26 Identities=12% Similarity=0.225 Sum_probs=18.8
Q ss_pred CCccEEEE--CCCchhHHHHHHHcCCCe
Q 045029 112 PRLAGFVL--DMFCTCMIEVADEFKVPS 137 (485)
Q Consensus 112 ~~~D~vI~--D~~~~~~~~~A~~lgiP~ 137 (485)
.++|.|+. |.....+..+++.+|+|.
T Consensus 74 ~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 74 FPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp SCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred cCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 47898884 444455667889999993
No 92
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=38.74 E-value=1.6e+02 Score=23.92 Aligned_cols=141 Identities=15% Similarity=0.155 Sum_probs=74.9
Q ss_pred EEEEeecCcccCCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchhhh
Q 045029 280 VVFLCFGSWGSFGEDQVKEIACALEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQIAV 359 (485)
Q Consensus 280 ~vyvs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~v 359 (485)
.|-|-+||. -+....++....|+..|.++=..+-+. ...|+... +|+.+..
T Consensus 4 ~V~Iimgs~--SD~~v~~~a~~~l~~~gi~~ev~V~sa----------------HR~p~~~~----------~~~~~a~- 54 (159)
T 3rg8_A 4 LVIILMGSS--SDMGHAEKIASELKTFGIEYAIRIGSA----------------HKTAEHVV----------SMLKEYE- 54 (159)
T ss_dssp EEEEEESSG--GGHHHHHHHHHHHHHTTCEEEEEECCT----------------TTCHHHHH----------HHHHHHH-
T ss_pred eEEEEECcH--HHHHHHHHHHHHHHHcCCCEEEEEEcc----------------cCCHHHHH----------HHHHHhh-
Confidence 566667874 356677788888888888765444332 23454322 2222211
Q ss_pred hccCCccccccccCchhhHHHHh---hCCcEeeccccccch-hh-HHHHHHh-hceeEEeeecccccccccCCcccCHHH
Q 045029 360 LAHPAIGGFVSHCGWNSTLESIW---FGVPIATWPMYAEQQ-FN-AFELVVE-LGLAVEIKMDYRNDIMIENPTVVNAEV 433 (485)
Q Consensus 360 L~h~~~~~~itHgG~~s~~eal~---~GvP~v~~P~~~DQ~-~n-a~r~~~~-~g~G~~l~~~~~~~~~~~~~~~~~~~~ 433 (485)
..-..++||.=.|.-.-+-++. .-+|+|.+|...-.. .. -.-+++. -|+.+.-- + +..++.-
T Consensus 55 -~~~~~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dLlS~vqmp~GvpVatv-~----------~~~nAa~ 122 (159)
T 3rg8_A 55 -ALDRPKLYITIAGRSNALSGFVDGFVKGATIACPPPSDSFAGADIYSSLRMPSGISPALV-L----------EPKNAAL 122 (159)
T ss_dssp -TSCSCEEEEEECCSSCCHHHHHHHHSSSCEEECCCCCCGGGGTHHHHHHCCCTTCCCEEC-C----------SHHHHHH
T ss_pred -hcCCCcEEEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCCccHHHHHhCCCCCceEEe-c----------CchHHHH
Confidence 1112344887777543333332 458999999653111 11 1112220 14443211 1 1456666
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHHhh
Q 045029 434 IERGIRCLMEHNSEMRKRVKEMSEKARKAL 463 (485)
Q Consensus 434 l~~av~~vl~~~~~~r~~a~~~~~~~~~~~ 463 (485)
++..|-.+ . |++++++.+.+++..++.+
T Consensus 123 lA~~Il~~-~-d~~l~~kl~~~r~~~~~~v 150 (159)
T 3rg8_A 123 LAARIFSL-Y-DKEIADSVKSYMESNAQKI 150 (159)
T ss_dssp HHHHHHTT-T-CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhC-C-CHHHHHHHHHHHHHHHHHH
Confidence 66555432 3 6788888888888777654
No 93
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=38.73 E-value=24 Score=30.32 Aligned_cols=38 Identities=16% Similarity=0.121 Sum_probs=28.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHh-CCCCeEEEEEEcC
Q 045029 2 KKAQLVFIPSPGAGHLVSTVEVARLLVD-RDDRLSVTVLIMK 42 (485)
Q Consensus 2 ~~~~i~~~~~~~~GH~~P~l~La~~L~~-rGH~v~Vt~~~~~ 42 (485)
++.||++.-.|+.+=+. ...|.+.|.+ +|++ |.++.++
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~--V~vv~T~ 56 (206)
T 1qzu_A 18 RKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLE--VAVVTTE 56 (206)
T ss_dssp SSEEEEEEECSSGGGGT-HHHHHHHHC---CEE--EEEEECT
T ss_pred CCCEEEEEEeChHHHHH-HHHHHHHHhcccCCE--EEEEECH
Confidence 45688888888877554 5899999999 8988 5577766
No 94
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=38.44 E-value=52 Score=27.69 Aligned_cols=43 Identities=12% Similarity=0.244 Sum_probs=32.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcCCCCCchhhhhhhh
Q 045029 5 QLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMKLPHDNTVATYTQS 55 (485)
Q Consensus 5 ~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~ 55 (485)
||++.-.|+.|-+ =...+.+.|.++|++ |.++.++ ....|+..
T Consensus 3 ~IllgvTGs~aa~-k~~~l~~~L~~~g~~--V~vv~T~-----~A~~~i~~ 45 (189)
T 2ejb_A 3 KIALCITGASGVI-YGIKLLQVLEELDFS--VDLVISR-----NAKVVLKE 45 (189)
T ss_dssp EEEEEECSSTTHH-HHHHHHHHHHHTTCE--EEEEECH-----HHHHHHHH
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHCCCE--EEEEECh-----hHHHHhhH
Confidence 7888888887855 578999999999988 5577666 44455543
No 95
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=38.16 E-value=40 Score=26.42 Aligned_cols=31 Identities=13% Similarity=0.150 Sum_probs=22.4
Q ss_pred CccEEEECCCchh--HHHHHHHc-------CCCeEEEech
Q 045029 113 RLAGFVLDMFCTC--MIEVADEF-------KVPSYLFFTS 143 (485)
Q Consensus 113 ~~D~vI~D~~~~~--~~~~A~~l-------giP~v~~~~~ 143 (485)
+||+||.|...+. +..+++++ .+|.+.++..
T Consensus 57 ~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~ 96 (134)
T 3to5_A 57 DFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAE 96 (134)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESS
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECC
Confidence 8999999998765 56666543 6887766543
No 96
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=38.15 E-value=2.1e+02 Score=25.14 Aligned_cols=27 Identities=22% Similarity=0.180 Sum_probs=22.3
Q ss_pred CCccCHHHHHHHHHHHHhCCCCeEEEEEE
Q 045029 12 PGAGHLVSTVEVARLLVDRDDRLSVTVLI 40 (485)
Q Consensus 12 ~~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (485)
...|=..-.+.|++.|+++|.+ |.++-
T Consensus 36 t~vGKT~vt~gL~~~l~~~G~~--V~~fK 62 (251)
T 3fgn_A 36 TGVGKTVVCAALASAARQAGID--VAVCK 62 (251)
T ss_dssp TTSCHHHHHHHHHHHHHHTTCC--EEEEE
T ss_pred CCCcHHHHHHHHHHHHHHCCCe--EEEEe
Confidence 3778889999999999999988 44653
No 97
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=38.07 E-value=2.3e+02 Score=25.66 Aligned_cols=34 Identities=9% Similarity=0.233 Sum_probs=21.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEE
Q 045029 3 KAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLI 40 (485)
Q Consensus 3 ~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (485)
.++|+++ |+.|.+ -..|++.|.++||++.|+...
T Consensus 24 ~~~vlVt--GatG~i--G~~l~~~L~~~g~~~~v~~~~ 57 (346)
T 4egb_A 24 AMNILVT--GGAGFI--GSNFVHYMLQSYETYKIINFD 57 (346)
T ss_dssp CEEEEEE--TTTSHH--HHHHHHHHHHHCTTEEEEEEE
T ss_pred CCeEEEE--CCccHH--HHHHHHHHHhhCCCcEEEEEe
Confidence 3455444 344433 358899999999886655544
No 98
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=37.87 E-value=1.7e+02 Score=24.08 Aligned_cols=35 Identities=20% Similarity=0.435 Sum_probs=27.0
Q ss_pred EEEE-cCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcC
Q 045029 6 LVFI-PSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMK 42 (485)
Q Consensus 6 i~~~-~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (485)
|++. +-|+.|=..-...||..|+++|++ |.++-..
T Consensus 4 i~v~s~kgG~GKTt~a~~la~~la~~g~~--vlliD~D 39 (206)
T 4dzz_A 4 ISFLNPKGGSGKTTAVINIATALSRSGYN--IAVVDTD 39 (206)
T ss_dssp EEECCSSTTSSHHHHHHHHHHHHHHTTCC--EEEEECC
T ss_pred EEEEeCCCCccHHHHHHHHHHHHHHCCCe--EEEEECC
Confidence 4444 456889999999999999999998 5566543
No 99
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=37.83 E-value=49 Score=27.95 Aligned_cols=43 Identities=7% Similarity=0.040 Sum_probs=33.3
Q ss_pred hhHHHHHHhhhhcCCCCCCccEEEECCCchhHHHHHHHcCCCeEEEechhH
Q 045029 95 PHVKEVVANLTDESPDSPRLAGFVLDMFCTCMIEVADEFKVPSYLFFTSGA 145 (485)
Q Consensus 95 ~~~~~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~ 145 (485)
..+++.++++.+. ++++||.|. .+..+|+++|+|.+.+.+...
T Consensus 129 ~e~~~~i~~l~~~-----G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~e 171 (196)
T 2q5c_A 129 DEITTLISKVKTE-----NIKIVVSGK---TVTDEAIKQGLYGETINSGEE 171 (196)
T ss_dssp GGHHHHHHHHHHT-----TCCEEEECH---HHHHHHHHTTCEEEECCCCHH
T ss_pred HHHHHHHHHHHHC-----CCeEEECCH---HHHHHHHHcCCcEEEEecCHH
Confidence 3556778888765 899999875 457899999999888776444
No 100
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=36.59 E-value=40 Score=31.40 Aligned_cols=73 Identities=16% Similarity=0.209 Sum_probs=53.3
Q ss_pred CHHHHHHHHHHHHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchhhhhccCCccccccc
Q 045029 292 GEDQVKEIACALEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQIAVLAHPAIGGFVSH 371 (485)
Q Consensus 292 ~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~vL~h~~~~~~itH 371 (485)
+.+...++.+++....++.||..+++. +-.++.++++...+-.+|+. ||=+
T Consensus 64 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~---------------------------g~~rlL~~lD~~~i~~~PK~--~~Gy 114 (336)
T 3sr3_A 64 IQERAKELNALIRNPNVSCIMSTIGGM---------------------------NSNSLLPYIDYDAFQNNPKI--MIGY 114 (336)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCS---------------------------CGGGGGGGSCHHHHHHSCCE--EEEC
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccc---------------------------cHHHHhhhcChhHHhhCCeE--EEEe
Confidence 445688899999999999999998773 11345566666666667777 8777
Q ss_pred cCchhhHHHHh--hCCcEeecccc
Q 045029 372 CGWNSTLESIW--FGVPIATWPMY 393 (485)
Q Consensus 372 gG~~s~~eal~--~GvP~v~~P~~ 393 (485)
.-...++-+++ .|+..+--|+.
T Consensus 115 SDiTaL~~al~~~~G~~t~hGp~~ 138 (336)
T 3sr3_A 115 SDATALLLGIYAKTGIPTFYGPAL 138 (336)
T ss_dssp GGGHHHHHHHHHHHCCCEEECCCH
T ss_pred chHHHHHHHHHHhcCceEEECChh
Confidence 77777777776 57887777764
No 101
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=36.00 E-value=2.4e+02 Score=25.38 Aligned_cols=29 Identities=10% Similarity=0.094 Sum_probs=17.9
Q ss_pred eecCcccCCHHHHHHHHHHHHhcCCceEEEEcC
Q 045029 284 CFGSWGSFGEDQVKEIACALEQSGHRFLWSLRR 316 (485)
Q Consensus 284 s~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~ 316 (485)
..||....+.+ +++++.+++.+++.+.+.
T Consensus 115 qIgA~~~~n~~----LLr~va~~gkPVilK~G~ 143 (285)
T 3sz8_A 115 QVPAFLARQTD----LVVAIAKAGKPVNVKKPQ 143 (285)
T ss_dssp EECGGGTTCHH----HHHHHHHTSSCEEEECCT
T ss_pred EECccccCCHH----HHHHHHccCCcEEEeCCC
Confidence 34665444444 555556678888888765
No 102
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=33.79 E-value=1e+02 Score=22.89 Aligned_cols=36 Identities=11% Similarity=0.162 Sum_probs=29.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEE
Q 045029 1 MKKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSV 36 (485)
Q Consensus 1 m~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~V 36 (485)
|++.||++++..+.|--.-.-.+-+.+.++|.++.|
T Consensus 1 M~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i 36 (106)
T 1e2b_A 1 MEKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVII 36 (106)
T ss_dssp CCCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEE
T ss_pred CCCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEE
Confidence 777789999998877777777888889999988553
No 103
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=33.47 E-value=2.4e+02 Score=24.66 Aligned_cols=31 Identities=23% Similarity=0.348 Sum_probs=22.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCe
Q 045029 1 MKKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRL 34 (485)
Q Consensus 1 m~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v 34 (485)
|.+.++++++.++.| --.++|++|+++|++|
T Consensus 23 m~~~k~vlITGas~g---IG~a~a~~l~~~G~~V 53 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRG---IGAAVCRLAARQGWRV 53 (272)
T ss_dssp -CCSCEEEETTTTSH---HHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEECCCch---HHHHHHHHHHHCCCEE
Confidence 444567788776643 4578999999999884
No 104
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=33.22 E-value=50 Score=29.42 Aligned_cols=33 Identities=27% Similarity=0.295 Sum_probs=23.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEE
Q 045029 1 MKKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLI 40 (485)
Q Consensus 1 m~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (485)
|++++|++.- + | .--..|++.|.++||+ |+.+.
T Consensus 1 M~~~~ilVtG--a-G--~iG~~l~~~L~~~g~~--V~~~~ 33 (286)
T 3gpi_A 1 MSLSKILIAG--C-G--DLGLELARRLTAQGHE--VTGLR 33 (286)
T ss_dssp -CCCCEEEEC--C-S--HHHHHHHHHHHHTTCC--EEEEE
T ss_pred CCCCcEEEEC--C-C--HHHHHHHHHHHHCCCE--EEEEe
Confidence 7767777773 4 6 4456899999999999 54554
No 105
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=33.13 E-value=31 Score=33.21 Aligned_cols=47 Identities=17% Similarity=0.222 Sum_probs=35.0
Q ss_pred hhHhhhhccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhcCCceEE
Q 045029 266 ADIMAWLDDQPESSVVFLCFGSWGSFGEDQVKEIACALEQSGHRFLW 312 (485)
Q Consensus 266 ~~l~~~l~~~~~~~~vyvs~GS~~~~~~~~~~~~~~al~~~~~~~l~ 312 (485)
+...+|-...+...-|.|.++|+...+....+.+++++++.|+..+.
T Consensus 253 ~~Y~~w~~~~~~~~~v~I~Y~S~yGnTe~mA~~ia~gl~~~Gv~~~~ 299 (410)
T 4dik_A 253 NHYVSVAKGDPKKGKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVV 299 (410)
T ss_dssp HHHHHHHHTCCCTTEEEEEEECSSSHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHhhcccccccceeeEEecccChHHHHHHHHHHHHHhcCCceEE
Confidence 34455655443344677889999887888888999999999988664
No 106
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=33.11 E-value=79 Score=29.52 Aligned_cols=36 Identities=17% Similarity=0.188 Sum_probs=24.5
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHHhcCCceEEEEcC
Q 045029 279 SVVFLCFGSWGSFGEDQVKEIACALEQSGHRFLWSLRR 316 (485)
Q Consensus 279 ~~vyvs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~ 316 (485)
.+++.+-||-... .-...++++|++.|+.++|....
T Consensus 4 ~i~i~~GGTgGHi--~palala~~L~~~g~~V~~vg~~ 39 (365)
T 3s2u_A 4 NVLIMAGGTGGHV--FPALACAREFQARGYAVHWLGTP 39 (365)
T ss_dssp EEEEECCSSHHHH--HHHHHHHHHHHHTTCEEEEEECS
T ss_pred cEEEEcCCCHHHH--HHHHHHHHHHHhCCCEEEEEECC
Confidence 3777777774321 11356888999999999998644
No 107
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=32.65 E-value=2.3e+02 Score=24.07 Aligned_cols=112 Identities=10% Similarity=0.017 Sum_probs=0.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcCCCCCchhhhhhhhhhccCCCCCeEEEECCCCCCCCCCC
Q 045029 1 MKKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMKLPHDNTVATYTQSLAASNLSSRIKFINLPDDQPDKEST 80 (485)
Q Consensus 1 m~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~~ 80 (485)
|.|.||+++..+..+- +.+|.+.+.+.+-.+.|..+.+..+.. ...+... ..|+.+..++.....
T Consensus 5 m~~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a----~~l~~A~----~~gIp~~~~~~~~~~---- 69 (209)
T 4ds3_A 5 MKRNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEA----GGLAKAE----AAGIATQVFKRKDFA---- 69 (209)
T ss_dssp -CCEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTC----THHHHHH----HTTCCEEECCGGGSS----
T ss_pred CCCccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCccc----HHHHHHH----HcCCCEEEeCccccC----
Q ss_pred ChHhHHHHHHHhhhhhHHHHHHhhhhcCCCCCCccEEEECCCc-hhHHHHHHHcCCCeEEEech
Q 045029 81 PPKRFFGHFVESKKPHVKEVVANLTDESPDSPRLAGFVLDMFC-TCMIEVADEFKVPSYLFFTS 143 (485)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~D~vI~D~~~-~~~~~~A~~lgiP~v~~~~~ 143 (485)
....+++.+.+.+++ .++|++|+-.+. .-...+-+.+.-.++-+.++
T Consensus 70 ------------~r~~~d~~~~~~l~~----~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 117 (209)
T 4ds3_A 70 ------------SKEAHEDAILAALDV----LKPDIICLAGYMRLLSGRFIAPYEGRILNIHPS 117 (209)
T ss_dssp ------------SHHHHHHHHHHHHHH----HCCSEEEESSCCSCCCHHHHGGGTTCEEEEESS
T ss_pred ------------CHHHHHHHHHHHHHh----cCCCEEEEeccccCcCHHHHhhccCCeEEECCc
No 108
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=31.00 E-value=2.6e+02 Score=24.21 Aligned_cols=32 Identities=13% Similarity=0.208 Sum_probs=22.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeE
Q 045029 1 MKKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLS 35 (485)
Q Consensus 1 m~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~ 35 (485)
|.+.|.++++.++.| --.++|+.|+++|++|.
T Consensus 1 M~~~k~vlVTGas~g---IG~aia~~l~~~G~~vv 32 (258)
T 3oid_A 1 MEQNKCALVTGSSRG---VGKAAAIRLAENGYNIV 32 (258)
T ss_dssp --CCCEEEESSCSSH---HHHHHHHHHHHTTCEEE
T ss_pred CCCCCEEEEecCCch---HHHHHHHHHHHCCCEEE
Confidence 555577888776643 35689999999998843
No 109
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=30.80 E-value=39 Score=26.07 Aligned_cols=40 Identities=20% Similarity=0.191 Sum_probs=26.1
Q ss_pred hHHHHHHhhhhcCCCCCCccEEEECCCchh--HHHHHH---HcCCCeEEE
Q 045029 96 HVKEVVANLTDESPDSPRLAGFVLDMFCTC--MIEVAD---EFKVPSYLF 140 (485)
Q Consensus 96 ~~~~~l~~l~~~~~~~~~~D~vI~D~~~~~--~~~~A~---~lgiP~v~~ 140 (485)
...+.++.+.+. +||+||.|..++. +..+++ ..++|.+.+
T Consensus 41 ~g~eAl~~~~~~-----~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~l 85 (123)
T 2lpm_A 41 RMQEALDIARKG-----QFDIAIIDVNLDGEPSYPVADILAERNVPFIFA 85 (123)
T ss_dssp CHHHHHHHHHHC-----CSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCB
T ss_pred CHHHHHHHHHhC-----CCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 344556555443 8999999998754 344554 468996653
No 110
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=30.62 E-value=2.1e+02 Score=23.00 Aligned_cols=36 Identities=22% Similarity=0.081 Sum_probs=31.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEE
Q 045029 3 KAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLI 40 (485)
Q Consensus 3 ~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (485)
+.+|++.+.++-.|-.-..-++..|..+|++ |....
T Consensus 18 ~~~vlla~~~gd~HdiG~~~va~~l~~~G~e--Vi~lG 53 (161)
T 2yxb_A 18 RYKVLVAKMGLDGHDRGAKVVARALRDAGFE--VVYTG 53 (161)
T ss_dssp SCEEEEEEESSSSCCHHHHHHHHHHHHTTCE--EECCC
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHCCCE--EEECC
Confidence 5689999999999999999999999999988 54553
No 111
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=30.32 E-value=2.4e+02 Score=24.57 Aligned_cols=30 Identities=7% Similarity=0.015 Sum_probs=22.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEE
Q 045029 5 QLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVL 39 (485)
Q Consensus 5 ~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~ 39 (485)
|+++++.++.| --.++|+.|+++|++ |.++
T Consensus 12 k~vlVTGas~G---IG~aia~~la~~G~~--V~~~ 41 (262)
T 3ksu_A 12 KVIVIAGGIKN---LGALTAKTFALESVN--LVLH 41 (262)
T ss_dssp CEEEEETCSSH---HHHHHHHHHTTSSCE--EEEE
T ss_pred CEEEEECCCch---HHHHHHHHHHHCCCE--EEEE
Confidence 67788877765 457899999999988 4454
No 112
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=30.28 E-value=45 Score=18.95 Aligned_cols=29 Identities=10% Similarity=0.206 Sum_probs=21.8
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 045029 432 EVIERGIRCLMEHNSEMRKRVKEMSEKAR 460 (485)
Q Consensus 432 ~~l~~av~~vl~~~~~~r~~a~~~~~~~~ 460 (485)
.++.+.|++++..+......+.++++.+.
T Consensus 4 nQLEdkVEeLl~~~~~Le~eV~RL~~ll~ 32 (34)
T 2hy6_A 4 KQLADAVEELASANYHLANAVARLAKAVG 32 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHhc
Confidence 46888899998755677777777777653
No 113
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=30.20 E-value=64 Score=18.59 Aligned_cols=31 Identities=10% Similarity=0.222 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHHHHh
Q 045029 432 EVIERGIRCLMEHNSEMRKRVKEMSEKARKA 462 (485)
Q Consensus 432 ~~l~~av~~vl~~~~~~r~~a~~~~~~~~~~ 462 (485)
.++.+.|++++..+......+.+++..+.++
T Consensus 4 nQLE~KVEeLl~~~~~Le~eV~RLk~ll~~~ 34 (36)
T 1kd8_B 4 KQLKAKVEELKSKLWHLKNKVARLKKKNAEC 34 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHhccc
Confidence 4678889999885667888899998887654
No 114
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=30.12 E-value=79 Score=24.05 Aligned_cols=35 Identities=17% Similarity=0.188 Sum_probs=24.2
Q ss_pred CCCcEEEEEcCCCccCH--HHHHHHHHHHHhCCCCeEE
Q 045029 1 MKKAQLVFIPSPGAGHL--VSTVEVARLLVDRDDRLSV 36 (485)
Q Consensus 1 m~~~~i~~~~~~~~GH~--~P~l~La~~L~~rGH~v~V 36 (485)
|+|. +.++..+-.|+. .--+.+|..+.+.||+|.|
T Consensus 1 Mkk~-~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~v 37 (119)
T 2d1p_B 1 MKRI-AFVFSTAPHGTAAGREGLDALLATSALTDDLAV 37 (119)
T ss_dssp CCCE-EEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEE
T ss_pred CcEE-EEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEE
Confidence 7764 444445555665 5667899999999999654
No 115
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=29.85 E-value=2.1e+02 Score=25.10 Aligned_cols=35 Identities=17% Similarity=0.207 Sum_probs=24.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEE
Q 045029 1 MKKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLI 40 (485)
Q Consensus 1 m~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (485)
|-+.|.++++.++.| --.++|+.|+++|++ |.++.
T Consensus 1 Ml~~k~~lVTGas~G---IG~aia~~la~~G~~--V~~~~ 35 (264)
T 3tfo_A 1 MVMDKVILITGASGG---IGEGIARELGVAGAK--ILLGA 35 (264)
T ss_dssp CCTTCEEEESSTTSH---HHHHHHHHHHHTTCE--EEEEE
T ss_pred CCCCCEEEEeCCccH---HHHHHHHHHHHCCCE--EEEEE
Confidence 444467788776643 346899999999988 44543
No 116
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=29.74 E-value=2e+02 Score=26.16 Aligned_cols=28 Identities=18% Similarity=0.286 Sum_probs=21.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeE
Q 045029 5 QLVFIPSPGAGHLVSTVEVARLLVDRDDRLS 35 (485)
Q Consensus 5 ~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~ 35 (485)
++++++.++.| --.++|+.|+++|++|.
T Consensus 6 k~vlVTGas~G---IG~aia~~L~~~G~~V~ 33 (324)
T 3u9l_A 6 KIILITGASSG---FGRLTAEALAGAGHRVY 33 (324)
T ss_dssp CEEEESSCSSH---HHHHHHHHHHHTTCEEE
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCEEE
Confidence 57777776654 45689999999998843
No 117
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=29.72 E-value=80 Score=23.47 Aligned_cols=32 Identities=13% Similarity=0.194 Sum_probs=21.5
Q ss_pred CCccEEEECCCchh--HHHHHHHc-------CCCeEEEech
Q 045029 112 PRLAGFVLDMFCTC--MIEVADEF-------KVPSYLFFTS 143 (485)
Q Consensus 112 ~~~D~vI~D~~~~~--~~~~A~~l-------giP~v~~~~~ 143 (485)
.+||+||.|...+. +..+.+++ ++|.++++..
T Consensus 45 ~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~ 85 (122)
T 3gl9_A 45 FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAK 85 (122)
T ss_dssp BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESC
T ss_pred cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecC
Confidence 38999999987643 45555432 5887776553
No 118
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=29.44 E-value=1.7e+02 Score=28.75 Aligned_cols=24 Identities=4% Similarity=-0.139 Sum_probs=20.0
Q ss_pred CccEEEECCCchhHHHHHHHcCCCeEE
Q 045029 113 RLAGFVLDMFCTCMIEVADEFKVPSYL 139 (485)
Q Consensus 113 ~~D~vI~D~~~~~~~~~A~~lgiP~v~ 139 (485)
+||++|... ....+|+++|||++-
T Consensus 417 ~pDL~ig~~---~~~~ia~k~gIP~~~ 440 (492)
T 3u7q_A 417 KPDLIGSGI---KEKFIFQKMGIPFRE 440 (492)
T ss_dssp CCSEEEECH---HHHHHHHHTTCCEEE
T ss_pred CCcEEEeCc---chhHHHHHcCCCEEe
Confidence 899999864 446789999999874
No 119
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=28.77 E-value=1.7e+02 Score=28.21 Aligned_cols=39 Identities=18% Similarity=0.326 Sum_probs=32.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcCCCC
Q 045029 5 QLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMKLPH 45 (485)
Q Consensus 5 ~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~ 45 (485)
-+++..-|+.|=..-.+++|...+.+|.. |.+++.+...
T Consensus 199 liiIaG~pG~GKTtlal~ia~~~a~~g~~--vl~fSlEms~ 237 (444)
T 3bgw_A 199 FVLIAARPSMGKTAFALKQAKNMSDNDDV--VNLHSLEMGK 237 (444)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHHHTTCE--EEEECSSSCT
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHcCCE--EEEEECCCCH
Confidence 47888889999999999999999998876 6688877443
No 120
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=28.64 E-value=1.7e+02 Score=24.38 Aligned_cols=63 Identities=11% Similarity=0.289 Sum_probs=35.4
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcCCCC-CchhhhhhhhhhccCCCCCeEEEECCCC
Q 045029 6 LVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMKLPH-DNTVATYTQSLAASNLSSRIKFINLPDD 73 (485)
Q Consensus 6 i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~f~~l~~~ 73 (485)
|+++..+...+-.....+++.|++.|+. |.++.-.... +.....+.+.. +...+-+++.++..
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~gi~--v~~Ig~G~~~~~~~l~~la~~~---n~~~~s~~~~~~~~ 173 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKNNVA--IDIIHIGELQNESALQHFIDAA---NSSDSCHLVSIPPS 173 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHTTEE--EEEEEESCC---CHHHHHHHHH---CSTTCCEEEEECCC
T ss_pred EEEEECCCCCCchhHHHHHHHHHHCCCE--EEEEEeCCCCccHHHHHHHHhc---cCCCceEEEEecCc
Confidence 4455555556778889999999999966 4444322111 11133444433 22345677777665
No 121
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=28.56 E-value=48 Score=31.35 Aligned_cols=74 Identities=15% Similarity=0.150 Sum_probs=50.7
Q ss_pred CCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchhhhhccCCcccccc
Q 045029 291 FGEDQVKEIACALEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQIAVLAHPAIGGFVS 370 (485)
Q Consensus 291 ~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~vL~h~~~~~~it 370 (485)
.+.+...++.++|....++.||.++++. +-.++.++++...+-.+|+. ||=
T Consensus 93 td~~Ra~dL~~af~Dp~i~aI~~~rGGy---------------------------ga~rlLp~LD~~~i~~~PK~--fiG 143 (371)
T 3tla_A 93 TIKERAQEFNELVYNPDITCIMSTIGGD---------------------------NSNSLLPFLDYDAIIANPKI--IIG 143 (371)
T ss_dssp CHHHHHHHHHHHHTCTTEEEEEESCCCS---------------------------CGGGGGGGSCHHHHHHSCCE--EEE
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccc---------------------------cHHHHHhhcChhhHHhCCcE--EEE
Confidence 3455688899999999999999998773 11345556666666566666 776
Q ss_pred ccCchhhHHHHh--hCCcEeecccc
Q 045029 371 HCGWNSTLESIW--FGVPIATWPMY 393 (485)
Q Consensus 371 HgG~~s~~eal~--~GvP~v~~P~~ 393 (485)
..-...++-|++ .|++.+--|+.
T Consensus 144 ySDiTaL~~ai~~k~Gl~T~hGP~~ 168 (371)
T 3tla_A 144 YSDTTALLAGIYAKTGLITFYGPAL 168 (371)
T ss_dssp CGGGHHHHHHHHHHHCBCEEECCCH
T ss_pred echHHHHHHHHHHHcCCEEEECccc
Confidence 666666666665 47777766653
No 122
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=28.45 E-value=57 Score=18.55 Aligned_cols=28 Identities=14% Similarity=0.286 Sum_probs=22.3
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 045029 432 EVIERGIRCLMEHNSEMRKRVKEMSEKA 459 (485)
Q Consensus 432 ~~l~~av~~vl~~~~~~r~~a~~~~~~~ 459 (485)
.++.+.|+++|..+.+....+.++++.+
T Consensus 4 nQLE~kVEeLl~~n~~Le~eV~rLk~ll 31 (34)
T 2oxj_A 4 XQLEXKVXELLXKNXHLEXEVXRLKXLV 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 4678888888876678888888888775
No 123
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=28.38 E-value=65 Score=28.02 Aligned_cols=33 Identities=15% Similarity=0.330 Sum_probs=30.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeE
Q 045029 3 KAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLS 35 (485)
Q Consensus 3 ~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~ 35 (485)
+.+|++..-|+.|-..-++.+|..|+++|++|.
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~ 38 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVM 38 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEE
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEE
Confidence 457899999999999999999999999999954
No 124
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=28.14 E-value=2.7e+02 Score=23.40 Aligned_cols=36 Identities=17% Similarity=0.279 Sum_probs=30.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEE
Q 045029 3 KAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLI 40 (485)
Q Consensus 3 ~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (485)
+..|.+++..+.|-..-.+.+|.+.+.+|+. |-++.
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~r--V~~vQ 63 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKN--VGVVQ 63 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCC--EEEEE
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCe--EEEEE
Confidence 3478899999999999999999999999988 44664
No 125
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=27.81 E-value=2.8e+02 Score=24.11 Aligned_cols=30 Identities=17% Similarity=0.283 Sum_probs=22.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEE
Q 045029 5 QLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVL 39 (485)
Q Consensus 5 ~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~ 39 (485)
|+++++.++.| --.++|+.|+++|++ |.+.
T Consensus 12 k~vlVTGas~g---IG~aia~~l~~~G~~--V~~~ 41 (264)
T 3ucx_A 12 KVVVISGVGPA---LGTTLARRCAEQGAD--LVLA 41 (264)
T ss_dssp CEEEEESCCTT---HHHHHHHHHHHTTCE--EEEE
T ss_pred cEEEEECCCcH---HHHHHHHHHHHCcCE--EEEE
Confidence 67777777654 356899999999988 4444
No 126
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=27.79 E-value=2.6e+02 Score=26.86 Aligned_cols=36 Identities=19% Similarity=0.348 Sum_probs=30.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhC-CCCeEEEEEEcC
Q 045029 5 QLVFIPSPGAGHLVSTVEVARLLVDR-DDRLSVTVLIMK 42 (485)
Q Consensus 5 ~i~~~~~~~~GH~~P~l~La~~L~~r-GH~v~Vt~~~~~ 42 (485)
.|+++..++.|-..-...||..|+.+ |+. |.++...
T Consensus 102 vI~ivG~~GvGKTT~a~~LA~~l~~~~G~k--Vllvd~D 138 (433)
T 2xxa_A 102 VVLMAGLQGAGKTTSVGKLGKFLREKHKKK--VLVVSAD 138 (433)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTSCCC--EEEEECC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhcCCe--EEEEecC
Confidence 56777778999999999999999999 998 5577655
No 127
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=27.50 E-value=58 Score=27.70 Aligned_cols=37 Identities=22% Similarity=0.086 Sum_probs=32.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEc
Q 045029 3 KAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIM 41 (485)
Q Consensus 3 ~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~ 41 (485)
+.+|++.+.++-.|-....-++..|..+|++ |..+..
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~--v~~LG~ 124 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFT--VYNLGV 124 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCE--EEECCS
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCE--EEECCC
Confidence 4589999999999999999999999999988 556643
No 128
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=27.33 E-value=2.8e+02 Score=24.25 Aligned_cols=29 Identities=21% Similarity=0.381 Sum_probs=23.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCCe
Q 045029 3 KAQLVFIPSPGAGHLVSTVEVARLLVDRDDRL 34 (485)
Q Consensus 3 ~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v 34 (485)
+-|+++++.+++| =-.++|+.|+++|.+|
T Consensus 6 ~gKvalVTGas~G---IG~aiA~~la~~Ga~V 34 (254)
T 4fn4_A 6 KNKVVIVTGAGSG---IGRAIAKKFALNDSIV 34 (254)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEE
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHcCCEE
Confidence 3478899988876 4678999999999873
No 129
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=27.28 E-value=2.8e+02 Score=23.64 Aligned_cols=32 Identities=19% Similarity=0.279 Sum_probs=21.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEE
Q 045029 4 AQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLI 40 (485)
Q Consensus 4 ~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (485)
.+.++++.++.| --.++|+.|+++|++ |..+.
T Consensus 5 ~k~vlITGas~g---IG~~~a~~l~~~G~~--v~~~~ 36 (247)
T 3lyl_A 5 EKVALVTGASRG---IGFEVAHALASKGAT--VVGTA 36 (247)
T ss_dssp TCEEEESSCSSH---HHHHHHHHHHHTTCE--EEEEE
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCE--EEEEe
Confidence 356777665542 346899999999988 44443
No 130
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=27.18 E-value=2.7e+02 Score=23.08 Aligned_cols=145 Identities=13% Similarity=0.183 Sum_probs=81.3
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchhh
Q 045029 279 SVVFLCFGSWGSFGEDQVKEIACALEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQIA 358 (485)
Q Consensus 279 ~~vyvs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~ 358 (485)
+.|-|-+||. -+....++....|+..|+++=..+-.. ...|+... +|+-+-.
T Consensus 22 ~~V~IimGS~--SD~~v~~~a~~~L~~~Gi~~dv~V~Sa----------------HR~p~~l~----------~~~~~a~ 73 (182)
T 1u11_A 22 PVVGIIMGSQ--SDWETMRHADALLTELEIPHETLIVSA----------------HRTPDRLA----------DYARTAA 73 (182)
T ss_dssp CSEEEEESSG--GGHHHHHHHHHHHHHTTCCEEEEECCT----------------TTCHHHHH----------HHHHHTT
T ss_pred CEEEEEECcH--HHHHHHHHHHHHHHHcCCCeEEEEEcc----------------cCCHHHHH----------HHHHHHH
Confidence 3566667884 366778888899999998865544332 23454321 1221110
Q ss_pred hhccCCccccccccCch----hhHHHHhhCCcEeecccccc--chhhH-HHHHH--hhceeEE-eeecccccccccCCcc
Q 045029 359 VLAHPAIGGFVSHCGWN----STLESIWFGVPIATWPMYAE--QQFNA-FELVV--ELGLAVE-IKMDYRNDIMIENPTV 428 (485)
Q Consensus 359 vL~h~~~~~~itHgG~~----s~~eal~~GvP~v~~P~~~D--Q~~na-~r~~~--~~g~G~~-l~~~~~~~~~~~~~~~ 428 (485)
=...+| ||.=.|.- ++..++ .-+|+|.+|.... .-..+ .-+++ . |+.+. +..+.. +.
T Consensus 74 -~~g~~V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~-GvpVatV~I~~a--------~~ 140 (182)
T 1u11_A 74 -ERGLNV--IIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPG-GVPVGTLAIGAS--------GA 140 (182)
T ss_dssp -TTTCCE--EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCT-TSCCEECCSSHH--------HH
T ss_pred -hCCCcE--EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCceEEEecCCc--------cc
Confidence 011334 77766644 344333 4789999998642 11111 11234 4 55532 111100 13
Q ss_pred cCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHhhhcC
Q 045029 429 VNAEVIERGIRCLMEHNSEMRKRVKEMSEKARKALSDG 466 (485)
Q Consensus 429 ~~~~~l~~av~~vl~~~~~~r~~a~~~~~~~~~~~~~g 466 (485)
.++.-++..|- -+. |++++++.+.+++..++.+...
T Consensus 141 ~nAallAaqIl-a~~-d~~l~~kL~~~r~~~~~~v~~~ 176 (182)
T 1u11_A 141 KNAALLAASIL-ALY-NPALAARLETWRALQTASVPNS 176 (182)
T ss_dssp HHHHHHHHHHH-GGG-CHHHHHHHHHHHHHHHHHSCSS
T ss_pred hHHHHHHHHHH-ccC-CHHHHHHHHHHHHHHHHHHHHh
Confidence 45666666664 335 6899999999999988876553
No 131
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=27.06 E-value=1.1e+02 Score=26.51 Aligned_cols=29 Identities=14% Similarity=0.092 Sum_probs=24.4
Q ss_pred CCccccccccCchhhHHHHhhCCcEeeccccc
Q 045029 363 PAIGGFVSHCGWNSTLESIWFGVPIATWPMYA 394 (485)
Q Consensus 363 ~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~ 394 (485)
+++ +|+.||-...+..- .++|+|-++..+
T Consensus 64 ~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 64 CDA--IIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeE--EEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 455 99999999998875 579999999874
No 132
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=26.81 E-value=1.6e+02 Score=22.77 Aligned_cols=62 Identities=13% Similarity=0.065 Sum_probs=36.6
Q ss_pred hCCcEeeccccccchhhHHHHHHhhceeEEeeecccccccccCCcccCHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 045029 383 FGVPIATWPMYAEQQFNAFELVVELGLAVEIKMDYRNDIMIENPTVVNAEVIERGIRCLMEHNSEMRKRVKEMSEKA 459 (485)
Q Consensus 383 ~GvP~v~~P~~~DQ~~na~r~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~r~~a~~~~~~~ 459 (485)
..+|+|++--..|. ....+..+. |+--.+.+ .++.++|..+|++++. ...+++..+++++.+
T Consensus 74 ~~~pii~ls~~~~~-~~~~~~~~~-g~~~~l~k------------P~~~~~L~~~i~~~~~-~~~~~~~~~~~~~~~ 135 (155)
T 1qkk_A 74 PDLPMILVTGHGDI-PMAVQAIQD-GAYDFIAK------------PFAADRLVQSARRAEE-KRRLVMENRSLRRAA 135 (155)
T ss_dssp TTSCEEEEECGGGH-HHHHHHHHT-TCCEEEES------------SCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCh-HHHHHHHhc-CCCeEEeC------------CCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 47888888544442 333343343 65444443 5789999999999987 344434333443333
No 133
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=26.79 E-value=78 Score=28.01 Aligned_cols=38 Identities=24% Similarity=0.127 Sum_probs=33.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcC
Q 045029 3 KAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMK 42 (485)
Q Consensus 3 ~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (485)
+.+|++.+.++-.|-....-++..|..+|++ |..+...
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~--Vi~LG~~ 160 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYN--VVDLGRD 160 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCE--EEEEEEE
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCE--EEECCCC
Confidence 5689999999999999999999999999988 5566543
No 134
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=26.76 E-value=78 Score=26.68 Aligned_cols=31 Identities=6% Similarity=0.147 Sum_probs=25.2
Q ss_pred CCccccccccCchhhHHHHhhCCcEeeccccc
Q 045029 363 PAIGGFVSHCGWNSTLESIWFGVPIATWPMYA 394 (485)
Q Consensus 363 ~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~ 394 (485)
..+.++|+.||-...+..- .++|+|-++..+
T Consensus 50 ~~~dVIISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 50 DEVDAIISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TTCSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCCeEEEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 3444599999999988875 579999999875
No 135
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=26.71 E-value=2.7e+02 Score=23.00 Aligned_cols=148 Identities=12% Similarity=0.112 Sum_probs=77.1
Q ss_pred CcEEEEeecCcccCCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchh
Q 045029 278 SSVVFLCFGSWGSFGEDQVKEIACALEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQI 357 (485)
Q Consensus 278 ~~~vyvs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~ 357 (485)
+|.|-|-+||.. +....++..+.|+..++.+=..+-.. ...|+.+. +|+-..
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SA----------------HRtp~~l~----------~~~~~a 73 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA----------------HRTPDYMF----------EYAETA 73 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT----------------TTSHHHHH----------HHHHHT
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcc----------------ccChHHHH----------HHHHHH
Confidence 357878899954 66778888999999998765555433 23454322 222111
Q ss_pred hhhccCCccccccccCch----hhHHHHhhCCcEeeccccccch---hhHHHHHHhhceeEEeeecccccccccCCcccC
Q 045029 358 AVLAHPAIGGFVSHCGWN----STLESIWFGVPIATWPMYAEQQ---FNAFELVVELGLAVEIKMDYRNDIMIENPTVVN 430 (485)
Q Consensus 358 ~vL~h~~~~~~itHgG~~----s~~eal~~GvP~v~~P~~~DQ~---~na~r~~~~~g~G~~l~~~~~~~~~~~~~~~~~ 430 (485)
....++++|.=.|.- ++..+ ..-+|+|++|...... +.-.-+++ +=-|+-+-+-.- + ..+..+
T Consensus 74 ---~~~g~~ViIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSivQ-MP~GvpVaTvai---g--~~ga~N 143 (181)
T 4b4k_A 74 ---RERGLKVIIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQ-MPGGVPVATVAI---G--KAGSTN 143 (181)
T ss_dssp ---TTTTCCEEEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHHT-CCTTCCCEECCS---S--HHHHHH
T ss_pred ---HhcCceEEEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHHh-CCCCCceEEEec---C--CccHHH
Confidence 112233376666543 33322 3468999999865322 11222233 122322221100 0 001223
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHHHHhhhc
Q 045029 431 AEVIERGIRCLMEHNSEMRKRVKEMSEKARKALSD 465 (485)
Q Consensus 431 ~~~l~~av~~vl~~~~~~r~~a~~~~~~~~~~~~~ 465 (485)
+.-++..|-. +. |++++++.+.+++.+++.+.+
T Consensus 144 AallA~qILa-~~-d~~l~~kl~~~r~~~~~~v~~ 176 (181)
T 4b4k_A 144 AGLLAAQILG-SF-HDDIHDALELRREAIEKDVRE 176 (181)
T ss_dssp HHHHHHHHHT-TT-CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHc-cC-CHHHHHHHHHHHHHHHHHHHH
Confidence 3334444322 23 688999998888888776544
No 136
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=26.44 E-value=73 Score=29.08 Aligned_cols=32 Identities=9% Similarity=0.092 Sum_probs=24.1
Q ss_pred hhccCCccccccccCchhhHHHHhh----CCcEeeccc
Q 045029 359 VLAHPAIGGFVSHCGWNSTLESIWF----GVPIATWPM 392 (485)
Q Consensus 359 vL~h~~~~~~itHgG~~s~~eal~~----GvP~v~~P~ 392 (485)
....+++ +|+-||=||+++++.. ++|+++++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 3344555 9999999999999754 899999974
No 137
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=25.98 E-value=3.1e+02 Score=23.42 Aligned_cols=32 Identities=16% Similarity=0.243 Sum_probs=22.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeE
Q 045029 1 MKKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLS 35 (485)
Q Consensus 1 m~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~ 35 (485)
|-+.|.++++.++.| --.++|+.|+++|++|.
T Consensus 1 Ml~~k~~lVTGas~g---IG~~ia~~l~~~G~~V~ 32 (246)
T 3osu_A 1 MKMTKSALVTGASRG---IGRSIALQLAEEGYNVA 32 (246)
T ss_dssp CCCSCEEEETTCSSH---HHHHHHHHHHHTTCEEE
T ss_pred CCCCCEEEEECCCCh---HHHHHHHHHHHCCCEEE
Confidence 444567777776643 45689999999998843
No 138
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=25.89 E-value=53 Score=24.14 Aligned_cols=53 Identities=6% Similarity=-0.027 Sum_probs=31.6
Q ss_pred cccCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHH
Q 045029 427 TVVNAEVIERGIRCLMEHNSEMRKRVKEMSEKARKALSDGGSSFSSMGRLIDDF 480 (485)
Q Consensus 427 ~~~~~~~l~~av~~vl~~~~~~r~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~ 480 (485)
|.++.++|+..++..+.....-...-..+.+.+++. +..|...-+.++|+.-+
T Consensus 29 G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~-D~d~DG~Idf~EF~~~m 81 (100)
T 3nxa_A 29 NKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNL-DANHDGRISFDEYWTLI 81 (100)
T ss_dssp TCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHS-CCCSSCCBCHHHHHHHH
T ss_pred CeEcHHHHHHHHHHHccccccccccHHHHHHHHHHh-CCCCCCCCcHHHHHHHH
Confidence 589999999999886541111112234566666663 55555555666666543
No 139
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3
Probab=25.67 E-value=79 Score=25.44 Aligned_cols=35 Identities=14% Similarity=0.089 Sum_probs=24.4
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHHhc-C-CceEEE
Q 045029 279 SVVFLCFGSWGSFGEDQVKEIACALEQS-G-HRFLWS 313 (485)
Q Consensus 279 ~~vyvs~GS~~~~~~~~~~~~~~al~~~-~-~~~l~~ 313 (485)
.+|+|+.||........+..+++.+++. + ..+-+.
T Consensus 26 avlLv~HGS~~p~~~~~~~~la~~l~~~~~~~~V~~a 62 (156)
T 1tjn_A 26 GLVIVGHGSQLNHYREVMELHRKRIEESGAFDEVKIA 62 (156)
T ss_dssp EEEEEECCTTSTTHHHHHHHHHHHHHHHTSSSEEEEE
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEE
Confidence 5999999996544445678888888764 3 455454
No 140
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=25.26 E-value=71 Score=18.02 Aligned_cols=28 Identities=7% Similarity=0.083 Sum_probs=21.5
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 045029 432 EVIERGIRCLMEHNSEMRKRVKEMSEKA 459 (485)
Q Consensus 432 ~~l~~av~~vl~~~~~~r~~a~~~~~~~ 459 (485)
.+|.+.|++++..+.+....+.+++..+
T Consensus 3 nQLEdKvEeLl~~~~~Le~EV~RLk~lL 30 (33)
T 3c3g_A 3 KXIEXKLXEIXSKXYHXENXLARIKXLL 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4677888888875667888888887765
No 141
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=25.26 E-value=49 Score=24.80 Aligned_cols=36 Identities=25% Similarity=0.419 Sum_probs=23.0
Q ss_pred CCCcEEEEEcCC-CccCHHHHHHHHHHHHhC-CC-CeEE
Q 045029 1 MKKAQLVFIPSP-GAGHLVSTVEVARLLVDR-DD-RLSV 36 (485)
Q Consensus 1 m~~~~i~~~~~~-~~GH~~P~l~La~~L~~r-GH-~v~V 36 (485)
|+|.-|++...| +.......+.+|..+.+. || +|+|
T Consensus 1 M~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~v 39 (117)
T 1jx7_A 1 MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRL 39 (117)
T ss_dssp CCEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred CcEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEE
Confidence 655333333333 234566779999999999 99 8543
No 142
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=25.11 E-value=1.1e+02 Score=21.29 Aligned_cols=49 Identities=16% Similarity=0.144 Sum_probs=30.6
Q ss_pred hhCCcEeeccccccchhhHHH---HHHhhceeEEeeecccccccccCCcccCHHHHHHHHHHHhc
Q 045029 382 WFGVPIATWPMYAEQQFNAFE---LVVELGLAVEIKMDYRNDIMIENPTVVNAEVIERGIRCLME 443 (485)
Q Consensus 382 ~~GvP~v~~P~~~DQ~~na~r---~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~l~~av~~vl~ 443 (485)
-+|.|++++--.+.|...... .... |+...+-+ .-.++++...+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakke-gvsydvlk------------stdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKE-GVSYDVLK------------STDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHH-TCEEEEEE------------CCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhc-Ccchhhhc------------cCCHHHHHHHHHHHHH
Confidence 368999988877777543321 1233 55555443 3567888888877764
No 143
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=24.78 E-value=3.9e+02 Score=24.15 Aligned_cols=34 Identities=18% Similarity=0.209 Sum_probs=20.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEE
Q 045029 1 MKKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLI 40 (485)
Q Consensus 1 m~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (485)
|.+++|+++- +.|.+ -..|++.|.++||+ |+.++
T Consensus 8 M~~~~IlVtG--atG~i--G~~l~~~L~~~g~~--V~~l~ 41 (346)
T 3i6i_A 8 SPKGRVLIAG--ATGFI--GQFVATASLDAHRP--TYILA 41 (346)
T ss_dssp ---CCEEEEC--TTSHH--HHHHHHHHHHTTCC--EEEEE
T ss_pred CCCCeEEEEC--CCcHH--HHHHHHHHHHCCCC--EEEEE
Confidence 4445565553 34533 35789999999999 54665
No 144
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=24.75 E-value=3.4e+02 Score=23.40 Aligned_cols=30 Identities=20% Similarity=0.313 Sum_probs=21.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEE
Q 045029 5 QLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVL 39 (485)
Q Consensus 5 ~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~ 39 (485)
|.++++.++.| --.++|+.|+++|++ |.++
T Consensus 7 k~vlVTGas~g---IG~aia~~l~~~G~~--V~~~ 36 (257)
T 3imf_A 7 KVVIITGGSSG---MGKGMATRFAKEGAR--VVIT 36 (257)
T ss_dssp CEEEETTTTSH---HHHHHHHHHHHTTCE--EEEE
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCE--EEEE
Confidence 56777776653 457899999999988 4454
No 145
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=24.73 E-value=3.3e+02 Score=23.78 Aligned_cols=28 Identities=18% Similarity=0.283 Sum_probs=20.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCe
Q 045029 4 AQLVFIPSPGAGHLVSTVEVARLLVDRDDRL 34 (485)
Q Consensus 4 ~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v 34 (485)
.+.++++.++.| --.++|+.|+++|++|
T Consensus 5 ~k~vlVTGas~g---IG~~~a~~l~~~G~~V 32 (281)
T 3m1a_A 5 AKVWLVTGASSG---FGRAIAEAAVAAGDTV 32 (281)
T ss_dssp CCEEEETTTTSH---HHHHHHHHHHHTTCEE
T ss_pred CcEEEEECCCCh---HHHHHHHHHHHCCCEE
Confidence 356777766542 3458999999999884
No 146
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=24.58 E-value=1.2e+02 Score=28.23 Aligned_cols=34 Identities=18% Similarity=0.316 Sum_probs=23.7
Q ss_pred EEEEeecCcccCCHHHHHHHHHHHHhcCCceEEEEc
Q 045029 280 VVFLCFGSWGSFGEDQVKEIACALEQSGHRFLWSLR 315 (485)
Q Consensus 280 ~vyvs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~ 315 (485)
++++++|+... ......++++|.+.|+.+.+...
T Consensus 7 il~~~~~~~Gh--v~~~~~La~~L~~~GheV~v~~~ 40 (402)
T 3ia7_A 7 ILFANVQGHGH--VYPSLGLVSELARRGHRITYVTT 40 (402)
T ss_dssp EEEECCSSHHH--HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEeCCCCcc--cccHHHHHHHHHhCCCEEEEEcC
Confidence 77777776432 23456788888888888887764
No 147
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=24.48 E-value=3.5e+02 Score=23.78 Aligned_cols=31 Identities=23% Similarity=0.209 Sum_probs=22.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEE
Q 045029 5 QLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLI 40 (485)
Q Consensus 5 ~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (485)
++++++.++.| --.++|+.|+++|++ |.++.
T Consensus 29 k~~lVTGas~G---IG~aia~~la~~G~~--V~~~~ 59 (283)
T 3v8b_A 29 PVALITGAGSG---IGRATALALAADGVT--VGALG 59 (283)
T ss_dssp CEEEEESCSSH---HHHHHHHHHHHTTCE--EEEEE
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCE--EEEEe
Confidence 57777776654 456899999999987 44543
No 148
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=24.43 E-value=2.8e+02 Score=23.87 Aligned_cols=34 Identities=9% Similarity=0.106 Sum_probs=22.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHh-CCCCeEEEEEE
Q 045029 2 KKAQLVFIPSPGAGHLVSTVEVARLLVD-RDDRLSVTVLI 40 (485)
Q Consensus 2 ~~~~i~~~~~~~~GH~~P~l~La~~L~~-rGH~v~Vt~~~ 40 (485)
.+.+.++++.++. - --..+++.|++ +|++ |.++.
T Consensus 2 ~~~k~vlITGasg-g--IG~~~a~~L~~~~g~~--V~~~~ 36 (276)
T 1wma_A 2 SGIHVALVTGGNK-G--IGLAIVRDLCRLFSGD--VVLTA 36 (276)
T ss_dssp CCCCEEEESSCSS-H--HHHHHHHHHHHHSSSE--EEEEE
T ss_pred CCCCEEEEeCCCc-H--HHHHHHHHHHHhcCCe--EEEEe
Confidence 3445666665543 2 35688999999 9988 44543
No 149
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=24.32 E-value=2.1e+02 Score=24.94 Aligned_cols=31 Identities=16% Similarity=0.239 Sum_probs=22.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEE
Q 045029 5 QLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLI 40 (485)
Q Consensus 5 ~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (485)
+.++++.++.| --.++|+.|+++|++ |.++.
T Consensus 28 k~vlVTGas~g---IG~aia~~l~~~G~~--V~~~~ 58 (260)
T 3gem_A 28 APILITGASQR---VGLHCALRLLEHGHR--VIISY 58 (260)
T ss_dssp CCEEESSTTSH---HHHHHHHHHHHTTCC--EEEEE
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCE--EEEEe
Confidence 56777766654 456899999999999 44543
No 150
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=24.30 E-value=3.7e+02 Score=23.97 Aligned_cols=26 Identities=8% Similarity=-0.050 Sum_probs=22.1
Q ss_pred cCCHHHHHHHHHHHHhcCCceEEEEc
Q 045029 290 SFGEDQVKEIACALEQSGHRFLWSLR 315 (485)
Q Consensus 290 ~~~~~~~~~~~~al~~~~~~~l~~~~ 315 (485)
.++.++..+++++|.+.|.+.|-...
T Consensus 22 ~~~~e~k~~i~~~L~~~Gv~~IE~g~ 47 (295)
T 1ydn_A 22 FVPTADKIALINRLSDCGYARIEATS 47 (295)
T ss_dssp CCCHHHHHHHHHHHTTTTCSEEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEcc
Confidence 36889999999999999999887654
No 151
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=24.26 E-value=46 Score=30.89 Aligned_cols=33 Identities=15% Similarity=0.182 Sum_probs=24.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEE
Q 045029 1 MKKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLI 40 (485)
Q Consensus 1 m~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (485)
|+++||+++-.|..|. .+|..|+++||+ |+++.
T Consensus 2 m~~mki~iiG~G~~G~-----~~a~~L~~~g~~--V~~~~ 34 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGH-----AFAAYLALKGQS--VLAWD 34 (359)
T ss_dssp --CCEEEEECCSHHHH-----HHHHHHHHTTCE--EEEEC
T ss_pred CCcCeEEEECCCHHHH-----HHHHHHHhCCCE--EEEEe
Confidence 6677999997776663 578889999998 66764
No 152
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=24.22 E-value=77 Score=27.48 Aligned_cols=39 Identities=10% Similarity=0.207 Sum_probs=30.4
Q ss_pred hHHHHHHhhhhcCCCCCCccEEEECCCchhHHHHHHHcCCCeEEEec
Q 045029 96 HVKEVVANLTDESPDSPRLAGFVLDMFCTCMIEVADEFKVPSYLFFT 142 (485)
Q Consensus 96 ~~~~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~ 142 (485)
..+..++++.+. ++++||.|. .+..+|+++|+|.+.+.+
T Consensus 142 e~~~~i~~l~~~-----G~~vVVG~~---~~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 142 DARGQINELKAN-----GTEAVVGAG---LITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHT-----TCCEEEESH---HHHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHC-----CCCEEECCH---HHHHHHHHcCCcEEEECC
Confidence 455677777765 899999875 457899999999888763
No 153
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=24.19 E-value=3.9e+02 Score=23.94 Aligned_cols=36 Identities=11% Similarity=0.221 Sum_probs=30.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcC
Q 045029 5 QLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMK 42 (485)
Q Consensus 5 ~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (485)
.++++..++.|-..-...||..|+.+|+. |.++..+
T Consensus 100 vi~i~G~~G~GKTT~~~~la~~~~~~g~~--v~l~~~D 135 (297)
T 1j8m_F 100 VIMLVGVQGTGKTTTAGKLAYFYKKKGFK--VGLVGAD 135 (297)
T ss_dssp EEEEECSSCSSTTHHHHHHHHHHHHTTCC--EEEEECC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCe--EEEEecC
Confidence 56677777999999999999999999988 5577655
No 154
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=23.95 E-value=50 Score=30.54 Aligned_cols=33 Identities=15% Similarity=0.241 Sum_probs=26.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEE
Q 045029 1 MKKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLI 40 (485)
Q Consensus 1 m~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (485)
|..+||+++-.|+.|- .+|..|++.||+ |+++.
T Consensus 1 M~~mkI~IiGaG~~G~-----~~a~~L~~~g~~--V~~~~ 33 (335)
T 3ghy_A 1 MSLTRICIVGAGAVGG-----YLGARLALAGEA--INVLA 33 (335)
T ss_dssp -CCCCEEEESCCHHHH-----HHHHHHHHTTCC--EEEEC
T ss_pred CCCCEEEEECcCHHHH-----HHHHHHHHCCCE--EEEEE
Confidence 7778899998877764 678999999999 66775
No 155
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=23.66 E-value=92 Score=25.27 Aligned_cols=32 Identities=25% Similarity=0.220 Sum_probs=24.1
Q ss_pred EEEEeecCcccCCHHHHHHHHHHHHhcC-CceE
Q 045029 280 VVFLCFGSWGSFGEDQVKEIACALEQSG-HRFL 311 (485)
Q Consensus 280 ~vyvs~GS~~~~~~~~~~~~~~al~~~~-~~~l 311 (485)
.+|+++||........++..+++|++.+ .+++
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~~~~~~ 34 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIPESHIL 34 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTSTTEEEE
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCCCCcee
Confidence 6899999987656677888888888753 4444
No 156
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=23.65 E-value=3.2e+02 Score=23.36 Aligned_cols=31 Identities=19% Similarity=0.217 Sum_probs=21.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEE
Q 045029 5 QLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLI 40 (485)
Q Consensus 5 ~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (485)
+.++++.++.| --.++|+.|+++|++ |.++.
T Consensus 10 k~vlITGas~g---iG~~~a~~l~~~G~~--V~~~~ 40 (253)
T 3qiv_A 10 KVGIVTGSGGG---IGQAYAEALAREGAA--VVVAD 40 (253)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCE--EEEEE
T ss_pred CEEEEECCCCh---HHHHHHHHHHHCCCE--EEEEc
Confidence 56777666542 356899999999988 44543
No 157
>1wrd_A TOM1, target of MYB protein 1; three-helix bundle, ubiquitin-binding protein, protein trans signaling protein complex; 1.75A {Homo sapiens} SCOP: a.7.8.1
Probab=23.61 E-value=1.3e+02 Score=22.30 Aligned_cols=37 Identities=19% Similarity=0.104 Sum_probs=26.4
Q ss_pred ccCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHhhhcCCCh
Q 045029 428 VVNAEVIERGIRCLMEHNSEMRKRVKEMSEKARKALSDGGSS 469 (485)
Q Consensus 428 ~~~~~~l~~av~~vl~~~~~~r~~a~~~~~~~~~~~~~gg~~ 469 (485)
.++++++++...++ ...+.|++-+.+++... .+|+..
T Consensus 2 ~~~~eq~~k~~~el----~~v~~n~~lL~EML~~~-~p~~~~ 38 (103)
T 1wrd_A 2 PLGSEQIGKLRSEL----EMVSGNVRVMSEMLTEL-VPTQAE 38 (103)
T ss_dssp CSSSTTHHHHHHHH----HHHHHHHHHHHHHHHHS-CTTTCC
T ss_pred CCCHHHHHHHHHHH----HHHHHHHHHHHHHHHhc-CCCCCC
Confidence 57788887777655 25788888888888774 666543
No 158
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=23.56 E-value=1.2e+02 Score=24.54 Aligned_cols=28 Identities=25% Similarity=0.210 Sum_probs=23.7
Q ss_pred EEEEeecCcccCCHHHHHHHHHHHHhcC
Q 045029 280 VVFLCFGSWGSFGEDQVKEIACALEQSG 307 (485)
Q Consensus 280 ~vyvs~GS~~~~~~~~~~~~~~al~~~~ 307 (485)
.+|+++||......+.++..+++|++.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 5899999988778888888889998753
No 159
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=23.49 E-value=1.7e+02 Score=23.03 Aligned_cols=44 Identities=14% Similarity=0.252 Sum_probs=28.9
Q ss_pred HhhhhccC---CCCcEEEEeecCcccCCHHHHHHHHHHHHhcCCceEEEEcC
Q 045029 268 IMAWLDDQ---PESSVVFLCFGSWGSFGEDQVKEIACALEQSGHRFLWSLRR 316 (485)
Q Consensus 268 l~~~l~~~---~~~~~vyvs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~ 316 (485)
+..|+..+ |.++ |++|.+. .+.+.+.++++.|...|+.++ ++++
T Consensus 12 ~Ka~~aag~~lP~~g-vliSv~d---~dK~~l~~~a~~l~~lGf~i~-AT~G 58 (143)
T 2yvq_A 12 LKAMLSTGFKIPQKG-ILIGIQQ---SFRPRFLGVAEQLHNEGFKLF-ATEA 58 (143)
T ss_dssp HHHHTSCSCCCCCSE-EEEECCG---GGHHHHHHHHHHHHTTTCEEE-EEHH
T ss_pred HHHHHhcCCCCCCCC-EEEEecc---cchHHHHHHHHHHHHCCCEEE-ECch
Confidence 44455432 3456 8887654 356778889999999999854 4543
No 160
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=23.33 E-value=68 Score=29.53 Aligned_cols=29 Identities=7% Similarity=-0.004 Sum_probs=20.4
Q ss_pred CccEEEECCCchhHHHHHHHcCCCeEEEe
Q 045029 113 RLAGFVLDMFCTCMIEVADEFKVPSYLFF 141 (485)
Q Consensus 113 ~~D~vI~D~~~~~~~~~A~~lgiP~v~~~ 141 (485)
+||+||......-...--++.|+|++.+.
T Consensus 116 ~PDLIi~~~~~~~~~~~L~~~gipvv~~~ 144 (335)
T 4hn9_A 116 TPDVVFLPMKLKKTADTLESLGIKAVVVN 144 (335)
T ss_dssp CCSEEEEEGGGHHHHHHHHHTTCCEEEEC
T ss_pred CCCEEEEeCcchhHHHHHHHcCCCEEEEc
Confidence 99999986543333444567899988864
No 161
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=22.98 E-value=3.2e+02 Score=22.60 Aligned_cols=142 Identities=18% Similarity=0.287 Sum_probs=76.9
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchhh
Q 045029 279 SVVFLCFGSWGSFGEDQVKEIACALEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQIA 358 (485)
Q Consensus 279 ~~vyvs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~ 358 (485)
|.|-|-+||. .+....++....|+..|.++=..+-+. ...|+... +++-+-.
T Consensus 14 ~~V~IimGS~--SD~~v~~~a~~~L~~~Gi~~dv~V~Sa----------------HR~p~~l~----------~~~~~a~ 65 (183)
T 1o4v_A 14 PRVGIIMGSD--SDLPVMKQAAEILEEFGIDYEITIVSA----------------HRTPDRMF----------EYAKNAE 65 (183)
T ss_dssp CEEEEEESCG--GGHHHHHHHHHHHHHTTCEEEEEECCT----------------TTCHHHHH----------HHHHHTT
T ss_pred CeEEEEeccH--HHHHHHHHHHHHHHHcCCCeEEEEEcc----------------cCCHHHHH----------HHHHHHH
Confidence 5777778884 366777888888888888865444332 23454322 1221110
Q ss_pred hhccCCccccccccCch----hhHHHHhhCCcEeecccccc--chhhHHHHHH-hh--ceeEEe-eecccccccccCCcc
Q 045029 359 VLAHPAIGGFVSHCGWN----STLESIWFGVPIATWPMYAE--QQFNAFELVV-EL--GLAVEI-KMDYRNDIMIENPTV 428 (485)
Q Consensus 359 vL~h~~~~~~itHgG~~----s~~eal~~GvP~v~~P~~~D--Q~~na~r~~~-~~--g~G~~l-~~~~~~~~~~~~~~~ 428 (485)
=...++ ||.=.|.- ++..++ .-+|+|.+|.... .-..+ .+.- .+ |+.+.. ..+ +.
T Consensus 66 -~~g~~V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~ds-LlSivqmP~GvpVatV~Id----------~~ 130 (183)
T 1o4v_A 66 -ERGIEV--IIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDS-LFSIVQMPGGVPVATVAIN----------NA 130 (183)
T ss_dssp -TTTCCE--EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHH-HHHHHTCCTTCCCEECCTT----------CH
T ss_pred -hCCCcE--EEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHH-HHHHhcCCCCCeeEEEecC----------Cc
Confidence 012233 77666643 333333 5688898887542 11122 2221 13 433221 111 14
Q ss_pred cCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHhhhc
Q 045029 429 VNAEVIERGIRCLMEHNSEMRKRVKEMSEKARKALSD 465 (485)
Q Consensus 429 ~~~~~l~~av~~vl~~~~~~r~~a~~~~~~~~~~~~~ 465 (485)
.++.-++..|- -+. |++++++.+..++..++.+.+
T Consensus 131 ~nAa~lAaqIl-a~~-d~~l~~kL~~~r~~~~~~v~~ 165 (183)
T 1o4v_A 131 KNAGILAASIL-GIK-YPEIARKVKEYKERMKREVLE 165 (183)
T ss_dssp HHHHHHHHHHH-HTT-CHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHH-hcC-CHHHHHHHHHHHHHHHHHHHH
Confidence 56666666664 334 678888888888877776544
No 162
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=22.78 E-value=99 Score=24.06 Aligned_cols=23 Identities=9% Similarity=0.016 Sum_probs=19.1
Q ss_pred CccCHHHHHHHHHHHHhCCCCeE
Q 045029 13 GAGHLVSTVEVARLLVDRDDRLS 35 (485)
Q Consensus 13 ~~GH~~P~l~La~~L~~rGH~v~ 35 (485)
.......-+.+|...++.||+|.
T Consensus 28 ~~~~~~~al~lA~~A~a~g~eV~ 50 (134)
T 3mc3_A 28 DLDRTYAPLFMASISASMEYETS 50 (134)
T ss_dssp GTHHHHHHHHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHHHHHHHHCCCCEE
Confidence 45677888899999999999955
No 163
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=22.51 E-value=3.8e+02 Score=23.28 Aligned_cols=29 Identities=10% Similarity=0.239 Sum_probs=21.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeE
Q 045029 4 AQLVFIPSPGAGHLVSTVEVARLLVDRDDRLS 35 (485)
Q Consensus 4 ~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~ 35 (485)
.|+++++.++.| --.++|+.|+++|++|.
T Consensus 28 ~k~vlVTGas~g---IG~aia~~la~~G~~V~ 56 (269)
T 4dmm_A 28 DRIALVTGASRG---IGRAIALELAAAGAKVA 56 (269)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEE
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEE
Confidence 367777776653 45689999999998843
No 164
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=22.34 E-value=3.8e+02 Score=25.68 Aligned_cols=36 Identities=14% Similarity=0.290 Sum_probs=29.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcC
Q 045029 5 QLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMK 42 (485)
Q Consensus 5 ~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (485)
.|+++..++.|-..-...||..|+.+|+. |.++..+
T Consensus 99 vI~lvG~~GsGKTTt~~kLA~~l~~~G~k--Vllv~~D 134 (433)
T 3kl4_A 99 IIMLVGVQGSGKTTTAGKLAYFYKKRGYK--VGLVAAD 134 (433)
T ss_dssp EEEECCCTTSCHHHHHHHHHHHHHHTTCC--EEEEEEC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHcCCe--EEEEecC
Confidence 45666667999999999999999999998 5566654
No 165
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=22.33 E-value=87 Score=17.76 Aligned_cols=28 Identities=7% Similarity=0.112 Sum_probs=21.6
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 045029 432 EVIERGIRCLMEHNSEMRKRVKEMSEKA 459 (485)
Q Consensus 432 ~~l~~av~~vl~~~~~~r~~a~~~~~~~ 459 (485)
.+|.+.|++++..+.+....+.++++.+
T Consensus 4 nQLEdKVEeLl~~~~~Le~EV~RLk~ll 31 (34)
T 3c3f_A 4 XQIEXKLEXILSXLYHXENEXARIXKLL 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 4678888888875567788888887765
No 166
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=22.24 E-value=72 Score=24.61 Aligned_cols=35 Identities=14% Similarity=0.089 Sum_probs=23.0
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHHhc-C-CceEEE
Q 045029 279 SVVFLCFGSWGSFGEDQVKEIACALEQS-G-HRFLWS 313 (485)
Q Consensus 279 ~~vyvs~GS~~~~~~~~~~~~~~al~~~-~-~~~l~~ 313 (485)
.+|+|+.||........+..+++.+++. + ..+-+.
T Consensus 5 alllv~HGS~~~~~~~~~~~la~~l~~~~~~~~V~~a 41 (133)
T 2xws_A 5 GLVIVGHGSQLNHYREVMELHRKRIEESGAFDEVKIA 41 (133)
T ss_dssp EEEEEECSCCCHHHHHHHHHHHHHHHHHTSSSEEEEE
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHHhhCCCCcEEee
Confidence 4999999996433334577788888763 3 455444
No 167
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=22.01 E-value=3.2e+02 Score=23.58 Aligned_cols=31 Identities=23% Similarity=0.291 Sum_probs=22.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEE
Q 045029 5 QLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLI 40 (485)
Q Consensus 5 ~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (485)
+.++++.++.| --.++|+.|+++|++ |.++.
T Consensus 30 k~vlITGas~g---IG~~la~~l~~~G~~--V~~~~ 60 (262)
T 3rkr_A 30 QVAVVTGASRG---IGAAIARKLGSLGAR--VVLTA 60 (262)
T ss_dssp CEEEESSTTSH---HHHHHHHHHHHTTCE--EEEEE
T ss_pred CEEEEECCCCh---HHHHHHHHHHHCCCE--EEEEE
Confidence 56777776643 457889999999988 44543
No 168
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=22.01 E-value=93 Score=25.65 Aligned_cols=34 Identities=21% Similarity=0.303 Sum_probs=22.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEE
Q 045029 1 MKKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLI 40 (485)
Q Consensus 1 m~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (485)
|++++|+++ |+.|. --..+++.|.++||+ |+.+.
T Consensus 1 M~~~~ilVt--GatG~--iG~~l~~~l~~~g~~--V~~~~ 34 (206)
T 1hdo_A 1 MAVKKIAIF--GATGQ--TGLTTLAQAVQAGYE--VTVLV 34 (206)
T ss_dssp CCCCEEEEE--STTSH--HHHHHHHHHHHTTCE--EEEEE
T ss_pred CCCCEEEEE--cCCcH--HHHHHHHHHHHCCCe--EEEEE
Confidence 665566655 33343 346889999999998 54554
No 169
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=22.00 E-value=1.1e+02 Score=24.86 Aligned_cols=33 Identities=21% Similarity=0.157 Sum_probs=24.5
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHHhc-CCceE
Q 045029 279 SVVFLCFGSWGSFGEDQVKEIACALEQS-GHRFL 311 (485)
Q Consensus 279 ~~vyvs~GS~~~~~~~~~~~~~~al~~~-~~~~l 311 (485)
..+|+++||........++..+.+|.+. +.+++
T Consensus 5 ~~v~i~LGSNlGd~~~~l~~A~~~L~~~~~~~v~ 38 (161)
T 3qbc_A 5 IQAYLGLGSNIGDRESQLNDAIKILNEYDGISVS 38 (161)
T ss_dssp EEEEEEEEECSSSHHHHHHHHHHHHHHSTTEEEE
T ss_pred cEEEEEEecCccCHHHHHHHHHHHHhcCCCCceE
Confidence 3799999998765667788888888874 34443
No 170
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=21.96 E-value=79 Score=28.82 Aligned_cols=32 Identities=13% Similarity=0.055 Sum_probs=23.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEc
Q 045029 2 KKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIM 41 (485)
Q Consensus 2 ~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~ 41 (485)
=+++|+++..+ ....+++++.++||+ |.++..
T Consensus 1 m~m~Ililg~g------~~~~l~~a~~~~G~~--v~~~~~ 32 (334)
T 2r85_A 1 MKVRIATYASH------SALQILKGAKDEGFE--TIAFGS 32 (334)
T ss_dssp CCSEEEEESST------THHHHHHHHHHTTCC--EEEESC
T ss_pred CceEEEEECCh------hHHHHHHHHHhCCCE--EEEEEC
Confidence 04588888765 567899999999998 546543
No 171
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=21.86 E-value=1.1e+02 Score=24.90 Aligned_cols=27 Identities=26% Similarity=0.213 Sum_probs=21.1
Q ss_pred EEEEeecCcccCCHHHHHHHHHHHHhc
Q 045029 280 VVFLCFGSWGSFGEDQVKEIACALEQS 306 (485)
Q Consensus 280 ~vyvs~GS~~~~~~~~~~~~~~al~~~ 306 (485)
+.|+++||....+.+.++..+.+|.+.
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~ 28 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDI 28 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTS
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcC
Confidence 679999998765566677788888765
No 172
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=21.79 E-value=1.2e+02 Score=22.86 Aligned_cols=32 Identities=9% Similarity=0.184 Sum_probs=20.8
Q ss_pred CccEEEECCCchh--HHHHHHH-------cCCCeEEEechh
Q 045029 113 RLAGFVLDMFCTC--MIEVADE-------FKVPSYLFFTSG 144 (485)
Q Consensus 113 ~~D~vI~D~~~~~--~~~~A~~-------lgiP~v~~~~~~ 144 (485)
+||+||.|...+. +..+++. ..+|.++++...
T Consensus 48 ~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 48 LPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 8999999987543 4444432 268877765543
No 173
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=21.64 E-value=3.6e+02 Score=23.14 Aligned_cols=32 Identities=16% Similarity=0.021 Sum_probs=22.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEE
Q 045029 4 AQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLI 40 (485)
Q Consensus 4 ~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (485)
.++++++.++.| --.++|+.|+++|++ |.++.
T Consensus 7 ~k~vlVTGas~G---IG~aia~~l~~~G~~--V~~~~ 38 (252)
T 3h7a_A 7 NATVAVIGAGDY---IGAEIAKKFAAEGFT--VFAGR 38 (252)
T ss_dssp SCEEEEECCSSH---HHHHHHHHHHHTTCE--EEEEE
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCE--EEEEe
Confidence 356777776653 456899999999988 44543
No 174
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=21.50 E-value=3.2e+02 Score=23.58 Aligned_cols=31 Identities=16% Similarity=0.192 Sum_probs=22.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEE
Q 045029 5 QLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLI 40 (485)
Q Consensus 5 ~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (485)
|+++++.++.| --.++|+.|+++|++ |.++.
T Consensus 13 k~vlVTGas~g---IG~~ia~~l~~~G~~--V~~~~ 43 (256)
T 3gaf_A 13 AVAIVTGAAAG---IGRAIAGTFAKAGAS--VVVTD 43 (256)
T ss_dssp CEEEECSCSSH---HHHHHHHHHHHHTCE--EEEEE
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCE--EEEEe
Confidence 57777776653 456899999999988 44543
No 175
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=21.38 E-value=3.4e+02 Score=22.24 Aligned_cols=145 Identities=15% Similarity=0.202 Sum_probs=77.2
Q ss_pred CcEEEEeecCcccCCHHHHHHHHHHHHhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCChhhHhhhcCCcceEeecchh
Q 045029 278 SSVVFLCFGSWGSFGEDQVKEIACALEQSGHRFLWSLRRPPSKDTFEKPSDYEDPTEVLPEGFMDRTANIGKVIGWAPQI 357 (485)
Q Consensus 278 ~~~vyvs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~ 357 (485)
.|.|-|-+||.. +....++....|+..|+.+=..+-+. ...|+.+. +|+-..
T Consensus 12 ~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~sa----------------HR~p~~l~----------~~~~~a 63 (173)
T 4grd_A 12 APLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSA----------------HRMPDEMF----------DYAEKA 63 (173)
T ss_dssp SCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT----------------TTSHHHHH----------HHHHHH
T ss_pred CCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcc----------------ccCHHHHH----------HHHHHH
Confidence 457777789843 66778888889999998865444332 23454322 222111
Q ss_pred hhhccCCccccccccCch----hhHHHHhhCCcEeeccccccchhh---HHHHHHh-hceeEEee-ecccccccccCCcc
Q 045029 358 AVLAHPAIGGFVSHCGWN----STLESIWFGVPIATWPMYAEQQFN---AFELVVE-LGLAVEIK-MDYRNDIMIENPTV 428 (485)
Q Consensus 358 ~vL~h~~~~~~itHgG~~----s~~eal~~GvP~v~~P~~~DQ~~n---a~r~~~~-~g~G~~l~-~~~~~~~~~~~~~~ 428 (485)
. ...++++|.=.|.- ++..+ ..-+|+|.+|.......- -.-+++- -|+.+..- .+ .++.
T Consensus 64 ~---~~g~~ViIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv~i~--------~~~a 131 (173)
T 4grd_A 64 R---ERGLRAIIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAIG--------EAGA 131 (173)
T ss_dssp T---TTTCSEEEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSS--------HHHH
T ss_pred H---hcCCeEEEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEEecC--------Ccch
Confidence 1 12233366655533 33333 446899999975432111 1112221 14433221 10 0012
Q ss_pred cCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHhhh
Q 045029 429 VNAEVIERGIRCLMEHNSEMRKRVKEMSEKARKALS 464 (485)
Q Consensus 429 ~~~~~l~~av~~vl~~~~~~r~~a~~~~~~~~~~~~ 464 (485)
.++.-++..|- -+. |++++++.+++++..++.+.
T Consensus 132 ~NAallA~~IL-a~~-d~~l~~kl~~~r~~~~~~v~ 165 (173)
T 4grd_A 132 ANAALFAVSIL-SGN-SVDYANRLAAFRVRQNEAAH 165 (173)
T ss_dssp HHHHHHHHHHH-TTS-CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-cCC-CHHHHHHHHHHHHHHHHHHH
Confidence 34444544442 234 68999999999988887653
No 176
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=21.11 E-value=3.7e+02 Score=24.20 Aligned_cols=29 Identities=10% Similarity=0.052 Sum_probs=18.5
Q ss_pred ecCcccCCHHHHHHHHHHHHhcCCceEEEEcCC
Q 045029 285 FGSWGSFGEDQVKEIACALEQSGHRFLWSLRRP 317 (485)
Q Consensus 285 ~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~ 317 (485)
-||....+.+ +++++.+++.+++.+.|..
T Consensus 114 IgA~~~~n~~----Ll~~~a~~~kPV~lk~G~~ 142 (292)
T 1o60_A 114 LPAFLARQTD----LVEAMAKTGAVINVKKPQF 142 (292)
T ss_dssp ECGGGTTCHH----HHHHHHHTTCEEEEECCTT
T ss_pred ECcccccCHH----HHHHHHcCCCcEEEeCCCC
Confidence 4664444444 5555667888988887753
No 177
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=21.05 E-value=62 Score=18.45 Aligned_cols=28 Identities=7% Similarity=0.203 Sum_probs=21.3
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 045029 432 EVIERGIRCLMEHNSEMRKRVKEMSEKA 459 (485)
Q Consensus 432 ~~l~~av~~vl~~~~~~r~~a~~~~~~~ 459 (485)
.+|.+.|+++|..+......+.++++.+
T Consensus 4 nQLEdKvEeLl~~~~~L~~EV~RLk~lL 31 (34)
T 2bni_A 4 KQIEDKLEEILSKGHHICNELARIKKLL 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHccHHHHHHHHHHHHHh
Confidence 4678888888875567788888887764
No 178
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=20.67 E-value=90 Score=27.21 Aligned_cols=29 Identities=3% Similarity=-0.043 Sum_probs=20.6
Q ss_pred CccEEEECCCch--hHHHHHHHcCCCeEEEe
Q 045029 113 RLAGFVLDMFCT--CMIEVADEFKVPSYLFF 141 (485)
Q Consensus 113 ~~D~vI~D~~~~--~~~~~A~~lgiP~v~~~ 141 (485)
+||+||...... -...--++.|+|++.+.
T Consensus 59 ~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 59 KPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp CCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 999999876542 23444567899988763
No 179
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=20.65 E-value=4.7e+02 Score=23.59 Aligned_cols=29 Identities=10% Similarity=0.011 Sum_probs=15.5
Q ss_pred eecCcccCCHHHHHHHHHHHHhcCCceEEEEcC
Q 045029 284 CFGSWGSFGEDQVKEIACALEQSGHRFLWSLRR 316 (485)
Q Consensus 284 s~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~ 316 (485)
..||....+.+ +++++.+++.+++.+.|.
T Consensus 136 kIgA~~~~n~~----LLr~va~~gkPVilK~Gm 164 (298)
T 3fs2_A 136 QIPAFLCRQTD----LLIAAARTGRVVNVKKGQ 164 (298)
T ss_dssp EECGGGTTCHH----HHHHHHHTTSEEEEECCT
T ss_pred EECccccCCHH----HHHHHHccCCcEEEeCCC
Confidence 34554433434 344445567777776654
No 180
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=20.65 E-value=1.2e+02 Score=29.88 Aligned_cols=95 Identities=13% Similarity=0.105 Sum_probs=48.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcCCCCCchhhhhhhhhhccCCCCCeEEEECCCCC-CCCCCC--
Q 045029 4 AQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMKLPHDNTVATYTQSLAASNLSSRIKFINLPDDQ-PDKEST-- 80 (485)
Q Consensus 4 ~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~-~~~~~~-- 80 (485)
.+-+|++. ++=.-++.+|+.|.+.|.+ +++|. ..+.+.+ ..|+.+..+.+.. .|+-..
T Consensus 10 i~~aLISV---sDK~glvelAk~L~~lGfe----I~ATg-----GTak~L~-------e~GI~v~~V~~vTgfPEil~GR 70 (523)
T 3zzm_A 10 IRRALISV---YDKTGLVDLAQGLSAAGVE----IISTG-----STAKTIA-------DTGIPVTPVEQLTGFPEVLDGR 70 (523)
T ss_dssp CCEEEEEE---SSCTTHHHHHHHHHHTTCE----EEECH-----HHHHHHH-------TTTCCCEEHHHHHSCCCCTTTT
T ss_pred ccEEEEEE---eccccHHHHHHHHHHCCCE----EEEcc-----hHHHHHH-------HcCCceeeccccCCCchhhCCc
Confidence 34455555 4555688999999999954 56655 2223333 4566666554322 233322
Q ss_pred ----ChHhHHHHHHHhhhhhHHHHHHhhhhcCCCCCCccEEEECCC
Q 045029 81 ----PPKRFFGHFVESKKPHVKEVVANLTDESPDSPRLAGFVLDMF 122 (485)
Q Consensus 81 ----~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~D~vI~D~~ 122 (485)
++ .....++- .....+-++++.+. .-.++|+||++..
T Consensus 71 VKTLHP-~ihgGiLa--~r~~~~h~~~l~~~--~i~~iDlVvvNLY 111 (523)
T 3zzm_A 71 VKTLHP-RVHAGLLA--DLRKSEHAAALEQL--GIEAFELVVVNLY 111 (523)
T ss_dssp SSSCSH-HHHHHHHC--CTTSHHHHHHHHHH--TCCCCSEEEEECC
T ss_pred cccCCc-hhhhhhcc--CCCCHHHHHHHHHC--CCCceeEEEEeCC
Confidence 11 11222211 11222333333332 3358899999854
No 181
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=20.62 E-value=5.2e+02 Score=25.42 Aligned_cols=31 Identities=6% Similarity=0.156 Sum_probs=19.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEc
Q 045029 4 AQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIM 41 (485)
Q Consensus 4 ~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~ 41 (485)
.|++++ |+-.-.+.|++.|.+-|-+ |..+.+
T Consensus 365 KrvaI~-----gd~~~~~~la~fL~elGm~--vv~v~~ 395 (523)
T 3u7q_B 365 KRFALW-----GDPDFVMGLVKFLLELGCE--PVHILC 395 (523)
T ss_dssp CEEEEE-----CSHHHHHHHHHHHHHTTCE--EEEEEE
T ss_pred CEEEEE-----CCchHHHHHHHHHHHcCCE--EEEEEe
Confidence 467776 3444456788888889976 444443
No 182
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=20.40 E-value=82 Score=24.04 Aligned_cols=32 Identities=9% Similarity=0.227 Sum_probs=21.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEE
Q 045029 2 KKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLI 40 (485)
Q Consensus 2 ~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (485)
++++|+++-. |.+- ..+++.|.++||+ |+++.
T Consensus 3 ~~m~i~IiG~---G~iG--~~~a~~L~~~g~~--v~~~d 34 (140)
T 1lss_A 3 HGMYIIIAGI---GRVG--YTLAKSLSEKGHD--IVLID 34 (140)
T ss_dssp --CEEEEECC---SHHH--HHHHHHHHHTTCE--EEEEE
T ss_pred CCCEEEEECC---CHHH--HHHHHHHHhCCCe--EEEEE
Confidence 3467888843 5443 4688999999988 65665
No 183
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=20.33 E-value=61 Score=31.14 Aligned_cols=36 Identities=25% Similarity=0.275 Sum_probs=24.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEcC
Q 045029 1 MKKAQLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIMK 42 (485)
Q Consensus 1 m~~~~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (485)
|.| ||+++-.+..| +..|+.|+++|.++.||++...
T Consensus 1 M~K-~VvIIGgG~aG-----l~aA~~L~~~~~~~~VtlI~~~ 36 (430)
T 3hyw_A 1 MAK-HVVVIGGGVGG-----IATAYNLRNLMPDLKITLISDR 36 (430)
T ss_dssp -CC-EEEEECSSHHH-----HHHHHHHHHHCTTCEEEEECSS
T ss_pred CCC-cEEEECCCHHH-----HHHHHHHhccCcCCeEEEEcCC
Confidence 776 78888665544 4677888877756668888644
No 184
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=20.22 E-value=49 Score=30.95 Aligned_cols=35 Identities=14% Similarity=0.081 Sum_probs=23.9
Q ss_pred CCCcEEEEEcCCCcc-C---HHHHHHHHHHHHhCCCCeE
Q 045029 1 MKKAQLVFIPSPGAG-H---LVSTVEVARLLVDRDDRLS 35 (485)
Q Consensus 1 m~~~~i~~~~~~~~G-H---~~P~l~La~~L~~rGH~v~ 35 (485)
|+|.||+++..|..+ | +..-.++++.|.+.||++.
T Consensus 1 M~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~ 39 (357)
T 4fu0_A 1 MQNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDII 39 (357)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEE
T ss_pred CCCCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEE
Confidence 899999888544222 3 3345578999999999854
No 185
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=20.10 E-value=1.2e+02 Score=24.06 Aligned_cols=35 Identities=9% Similarity=0.013 Sum_probs=26.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEEc
Q 045029 5 QLVFIPSPGAGHLVSTVEVARLLVDRDDRLSVTVLIM 41 (485)
Q Consensus 5 ~i~~~~~~~~GH~~P~l~La~~L~~rGH~v~Vt~~~~ 41 (485)
-.+++..+..-.+++.+.+|...++.|++ |+++.+
T Consensus 10 l~II~~sg~~d~~~~a~~lA~~Aaa~g~e--V~iF~t 44 (144)
T 2qs7_A 10 LSIIVFSGTIDKLMPVGILTSGAAASGYE--VNLFFT 44 (144)
T ss_dssp EEEEECCCSHHHHHHHHHHHHHHHHTTCE--EEEEEC
T ss_pred EEEEEEcCCHHHHHHHHHHHHHHHHcCCc--EEEEEe
Confidence 34555556678888999999999999999 445543
No 186
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=20.03 E-value=1e+02 Score=23.63 Aligned_cols=31 Identities=6% Similarity=0.234 Sum_probs=20.4
Q ss_pred CccEEEECCCchh--HHHHHHHc---------CCCeEEEech
Q 045029 113 RLAGFVLDMFCTC--MIEVADEF---------KVPSYLFFTS 143 (485)
Q Consensus 113 ~~D~vI~D~~~~~--~~~~A~~l---------giP~v~~~~~ 143 (485)
+||+||.|...+. +..+++.+ .+|.++++..
T Consensus 58 ~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 58 DYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 8999999987543 44554433 3787776543
No 187
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=20.00 E-value=1.2e+02 Score=24.62 Aligned_cols=28 Identities=18% Similarity=0.191 Sum_probs=22.2
Q ss_pred EEEEeecCcccCCHHHHHHHHHHHHhcC
Q 045029 280 VVFLCFGSWGSFGEDQVKEIACALEQSG 307 (485)
Q Consensus 280 ~vyvs~GS~~~~~~~~~~~~~~al~~~~ 307 (485)
.+|+++||......+.++..+.+|++.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQLS 30 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhCC
Confidence 5899999987666677888888888753
Done!