AmiGO: BLAST Results

Query Summary

Your job contains 1 sequence.
Parameters: Threshold: 0.001; Maximum number of alignments shown: 100; BLAST filter: on
Query Sequence

>045034
MAIKNNVFFIILVLMMTCHRAYATESRSYDLNNNNMNNPNLGPCYGPDSGQAYYECFKAI
QGLNSCSNLIAKFFTVSRSDIAQCCSAIDRVTSECSSWPDANTYTDPLPAFGYTDQELDM
LVSYCSRASSPAASSAPAPALAPNLIY
High Scoring Gene Products


Symbol, full name	Information	P value
BLAST match view associations BLAST with EC1.2 EC1.2 EC1.2 AT2G21740	protein from Arabidopsis thaliana	1.3e-06
BLAST match view associations BLAST with EC1.3 EC1.3 EC1.3 AT2G21750	protein from Arabidopsis thaliana	2.1e-06
BLAST match view associations BLAST with EC1.4 EC1.4 EC1.4 AT4G39340	protein from Arabidopsis thaliana	2.6e-06
BLAST match view associations BLAST with EC1.1 EC1.1 EC1.1 AT1G76750	protein from Arabidopsis thaliana	0.00013
Back to top
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  045034
        (147 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2052536 - symbol:EC1.2 "AT2G21740" species:370...   111  1.3e-06   1
TAIR|locus:2052556 - symbol:EC1.3 "AT2G21750" species:370...   109  2.1e-06   1
TAIR|locus:2136293 - symbol:EC1.4 "AT4G39340" species:370...   108  2.6e-06   1
TAIR|locus:2030136 - symbol:EC1.1 "AT1G76750" species:370...    92  0.00013   1


>TAIR|locus:2052536 [details] [associations]
            symbol:EC1.2 "AT2G21740" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM;IDA] [GO:0009567 "double
            fertilization forming a zygote and endosperm" evidence=IGI]
            [GO:0031982 "vesicle" evidence=IDA] [GO:0080155 "regulation of
            double fertilization forming a zygote and endosperm" evidence=IMP]
            [GO:2000008 "regulation of protein localization to cell surface"
            evidence=IMP] GO:GO:0005576 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0031982 GO:GO:0080155 EMBL:AC007019 GO:GO:2000008
            HOGENOM:HOG000272692 InterPro:IPR008502 Pfam:PF05617 EMBL:DQ446544
            EMBL:DQ653011 IPI:IPI00542544 PIR:F84604 RefSeq:NP_179766.1
            UniGene:At.66228 EnsemblPlants:AT2G21740.1 GeneID:816711
            KEGG:ath:AT2G21740 TAIR:At2g21740 eggNOG:NOG293372
            InParanoid:Q9SJ24 OMA:GGGLMEC PhylomeDB:Q9SJ24
            ProtClustDB:CLSN2683714 ArrayExpress:Q9SJ24 Genevestigator:Q9SJ24
            Uniprot:Q9SJ24
        Length = 125

 Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 24/78 (30%), Positives = 40/78 (51%)

Query:    49 SGQAYYECFKAIQGLNSCSNLIAKFFTVSRSDIA-QCCSAIDRVTSECSSWPDANTYTDP 107
             +G    EC+ A+  L SC+N I  FF    + +   CC A++ +T++C  WP        
Sbjct:    39 NGGGLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDC--WPAM------ 90

Query:   108 LPAFGYTDQELDMLVSYC 125
             L + G+T  E ++L  +C
Sbjct:    91 LTSLGFTSDETNVLRGFC 108


>TAIR|locus:2052556 [details] [associations]
            symbol:EC1.3 "AT2G21750" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM;IDA] [GO:0009567 "double
            fertilization forming a zygote and endosperm" evidence=IGI]
            [GO:0031982 "vesicle" evidence=IDA] [GO:0080155 "regulation of
            double fertilization forming a zygote and endosperm" evidence=IMP]
            [GO:2000008 "regulation of protein localization to cell surface"
            evidence=IMP] GO:GO:0005576 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0031982 GO:GO:0080155 EMBL:AC007019 GO:GO:2000008
            HOGENOM:HOG000272692 InterPro:IPR008502 Pfam:PF05617
            ProtClustDB:CLSN2683714 EMBL:DQ446545 EMBL:DQ653012 IPI:IPI00522390
            PIR:G84604 RefSeq:NP_179767.1 UniGene:At.66229 PRIDE:Q9SJ23
            EnsemblPlants:AT2G21750.1 GeneID:816712 KEGG:ath:AT2G21750
            TAIR:At2g21750 eggNOG:NOG261385 InParanoid:Q9SJ23 OMA:CNAVDVI
            PhylomeDB:Q9SJ23 Genevestigator:Q9SJ23 Uniprot:Q9SJ23
        Length = 125

 Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 24/78 (30%), Positives = 42/78 (53%)

Query:    49 SGQAYYECFKAIQGLNSCSNLIAKFFTVSRSDIAQ-CCSAIDRVTSECSSWPDANTYTDP 107
             +G    +C+ A+  L SC+N I  FF    + +   CC+A+D +T++C  WP        
Sbjct:    39 TGGGLMQCWDALYELKSCTNEIVLFFLNGETKLGYGCCNAVDVITTDC--WPAM------ 90

Query:   108 LPAFGYTDQELDMLVSYC 125
             L + G+T +E ++L  +C
Sbjct:    91 LTSLGFTLEETNVLRGFC 108


>TAIR|locus:2136293 [details] [associations]
            symbol:EC1.4 "AT4G39340" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM;IDA] [GO:0009567 "double
            fertilization forming a zygote and endosperm" evidence=IGI]
            [GO:0031982 "vesicle" evidence=IDA] [GO:0080155 "regulation of
            double fertilization forming a zygote and endosperm" evidence=IMP]
            [GO:2000008 "regulation of protein localization to cell surface"
            evidence=IMP] GO:GO:0005576 EMBL:CP002687 GenomeReviews:CT486007_GR
            EMBL:AL161595 GO:GO:0031982 GO:GO:0080155 GO:GO:2000008
            EMBL:AL050351 UniGene:At.24772 UniGene:At.75608
            HOGENOM:HOG000272692 InterPro:IPR008502 Pfam:PF05617
            ProtClustDB:CLSN2683714 EMBL:DQ446907 EMBL:DQ653255 IPI:IPI00526543
            PIR:T08582 RefSeq:NP_195644.1 UniGene:At.75461 PRIDE:Q9T039
            EnsemblPlants:AT4G39340.1 GeneID:830089 KEGG:ath:AT4G39340
            TAIR:At4g39340 eggNOG:NOG330298 InParanoid:Q9T039 OMA:DIITTNC
            PhylomeDB:Q9T039 Genevestigator:Q9T039 Uniprot:Q9T039
        Length = 127

 Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 23/72 (31%), Positives = 38/72 (52%)

Query:    55 ECFKAIQGLNSCSNLIAKFFTVSRSDIA-QCCSAIDRVTSECSSWPDANTYTDPLPAFGY 113
             EC+ A+  L SC+N I  FF    + +   CC ++D +T+ C  WP        L + G+
Sbjct:    47 ECWNALYELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNC--WPAM------LTSLGF 98

Query:   114 TDQELDMLVSYC 125
             T +E ++L  +C
Sbjct:    99 TPEEANVLRGFC 110


>TAIR|locus:2030136 [details] [associations]
            symbol:EC1.1 "AT1G76750" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM;IDA] [GO:0005622
            "intracellular" evidence=IDA] [GO:0009567 "double fertilization
            forming a zygote and endosperm" evidence=IGI] [GO:0031982 "vesicle"
            evidence=IDA] [GO:0048240 "sperm capacitation" evidence=IDA]
            [GO:0080155 "regulation of double fertilization forming a zygote
            and endosperm" evidence=IMP] [GO:2000008 "regulation of protein
            localization to cell surface" evidence=IMP] EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005576 GO:GO:0031982 GO:GO:0080155
            EMBL:AC010718 GO:GO:2000008 EMBL:AY735569 EMBL:AY773832
            IPI:IPI00546130 PIR:A96796 RefSeq:NP_177801.1 UniGene:At.34618
            UniGene:At.72900 DNASU:844009 EnsemblPlants:AT1G76750.1
            GeneID:844009 KEGG:ath:AT1G76750 TAIR:At1g76750 eggNOG:NOG301930
            HOGENOM:HOG000272692 InParanoid:Q9SRD8 OMA:CSAIRTI PhylomeDB:Q9SRD8
            ProtClustDB:CLSN2912748 Genevestigator:Q9SRD8 InterPro:IPR008502
            Pfam:PF05617 Uniprot:Q9SRD8
        Length = 158

 Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
 Identities = 24/71 (33%), Positives = 33/71 (46%)

Query:    56 CFKAIQGLNSCSNLIAKFFTVSRSDIAQ-CCSAIDRVTSECSSWPDANTYTDPLPAFGYT 114
             C+ ++  L  CS  +  FF    + I   CCSAI  +  +C  WP        +   G+T
Sbjct:    57 CWDSLMQLQHCSGELILFFLNGETYIGPGCCSAIRTIGRKC--WPTM------IGVLGFT 108

Query:   115 DQELDMLVSYC 125
              QE DML  YC
Sbjct:   109 AQEGDMLQGYC 119


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.136   0.433    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      147       122   0.00091  102 3  11 22  0.44    30
                                                     29  0.49    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  598 (64 KB)
  Total size of DFA:  140 KB (2085 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.94u 0.24s 12.18t   Elapsed:  00:00:00
  Total cpu time:  11.94u 0.24s 12.18t   Elapsed:  00:00:00
  Start:  Mon May 20 20:16:39 2013   End:  Mon May 20 20:16:39 2013
Back to top
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data
