BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045034
(147 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T039|EC14_ARATH Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4 PE=2
SV=1
Length = 127
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 52 AYYECFKAIQGLNSCSNLIAKFFTVSRSDIA-QCCSAIDRVTSECSSWPDANTYTDPLPA 110
EC+ A+ L SC+N I FF + + CC ++D +T+ C WP L +
Sbjct: 44 GLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNC--WPAM------LTS 95
Query: 111 FGYTDQELDMLVSYCSRASSPAASSAPAPALA 142
G+T +E ++L +C +S +S AP+P +
Sbjct: 96 LGFTPEEANVLRGFCQNPNSGDSSPAPSPKIV 127
>sp|Q9SJ23|EC13_ARATH Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3 PE=2
SV=1
Length = 125
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
Query: 49 SGQAYYECFKAIQGLNSCSNLIAKFFTVSRSDIA-QCCSAIDRVTSECSSWPDANTYTDP 107
+G +C+ A+ L SC+N I FF + + CC+A+D +T++C WP
Sbjct: 39 TGGGLMQCWDALYELKSCTNEIVLFFLNGETKLGYGCCNAVDVITTDC--WPAM------ 90
Query: 108 LPAFGYTDQELDMLVSYCSRASSPAASSAPAPALAP 143
L + G+T +E ++L +C +S +S PAL+P
Sbjct: 91 LTSLGFTLEETNVLRGFCQSPNSGGSS----PALSP 122
>sp|Q9SJ24|EC12_ARATH Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2 PE=2
SV=1
Length = 125
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
Query: 50 GQAYYECFKAIQGLNSCSNLIAKFFTVSRSDIA-QCCSAIDRVTSECSSWPDANTYTDPL 108
G EC+ A+ L SC+N I FF + + CC A++ +T++C WP L
Sbjct: 40 GGGLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDC--WPAM------L 91
Query: 109 PAFGYTDQELDMLVSYC 125
+ G+T E ++L +C
Sbjct: 92 TSLGFTSDETNVLRGFC 108
>sp|Q9SRD8|EC11_ARATH Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1 PE=2
SV=1
Length = 158
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 9/71 (12%)
Query: 56 CFKAIQGLNSCSNLIAKFFTVSRSDIA-QCCSAIDRVTSECSSWPDANTYTDPLPAFGYT 114
C+ ++ L CS + FF + I CCSAI + +C WP + G+T
Sbjct: 57 CWDSLMQLQHCSGELILFFLNGETYIGPGCCSAIRTIGRKC--WPTM------IGVLGFT 108
Query: 115 DQELDMLVSYC 125
QE DML YC
Sbjct: 109 AQEGDMLQGYC 119
>sp|Q9FGG1|EC15_ARATH Egg cell-secreted protein 1.5 OS=Arabidopsis thaliana GN=EC1.5 PE=2
SV=1
Length = 155
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 60/150 (40%), Gaps = 32/150 (21%)
Query: 8 FFIILVLMMTCHRAYATESRSYDLNNNNMNNPNLGPCYGPDSGQAYYECFKAIQGLNSCS 67
F ++ L+ T H E R+ ++ G +C+ A L SC+
Sbjct: 14 FLMMSYLISTFHVITVAEGRTLQFTKMATDHSGAG---------NLMDCWNAGLELKSCT 64
Query: 68 NLIAKFFTVSRSDIAQ----------CCSAIDRVTSECSSWPDANTYTDPLPAFGYTDQE 117
+ I KFF +S++ ++ CC AI V +C ++ + G T E
Sbjct: 65 DEIVKFF-LSQTGTSEPPVKGGIDKDCCGAIGLVVKDC--------WSVMFTSLGLTTME 115
Query: 118 LDMLVSYCS-RASSPAASSAPAP---ALAP 143
+ L YC +A S +PAP AL+P
Sbjct: 116 GNNLREYCEFQAEKSELSPSPAPETLALSP 145
>sp|B1VKH5|RPOC2_CRYJA DNA-directed RNA polymerase subunit beta'' OS=Cryptomeria japonica
GN=rpoC2 PE=3 SV=1
Length = 1212
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 10/62 (16%)
Query: 16 MTCHRAYATESRSYDLNNNNMNNPNLGPCYGPDSGQAYYECFKAIQGLNSCSNLIAKFFT 75
MT + TE RS ++NN+ NN L CY D + Y+ +SC N+I FF
Sbjct: 783 MTYKKVLLTE-RS--ISNNDSNNFQLAKCYFMDEKREIYQ-------FDSCRNIIFDFFN 832
Query: 76 VS 77
++
Sbjct: 833 LN 834
>sp|B9LBM0|ATPB_CHLSY ATP synthase subunit beta OS=Chloroflexus aurantiacus (strain ATCC
29364 / DSM 637 / Y-400-fl) GN=atpD PE=3 SV=1
Length = 471
Score = 30.8 bits (68), Expect = 3.1, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 91 VTSECSSWPDANTYTDPLPA--FGYTDQELDMLVSYCSRASSPAAS--SAPAPALAPNLI 146
+TS + + A+ YTDP PA F + D + + S RA PA ++ + L PN++
Sbjct: 300 ITSMQAVYVPADDYTDPAPATVFSHLDATISLERSIAERAIFPAVDPLASTSRILDPNIV 359
>sp|B8G6G6|ATPB_CHLAD ATP synthase subunit beta OS=Chloroflexus aggregans (strain MD-66 /
DSM 9485) GN=atpD PE=3 SV=1
Length = 471
Score = 30.8 bits (68), Expect = 3.1, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 91 VTSECSSWPDANTYTDPLPA--FGYTDQELDMLVSYCSRASSPAAS--SAPAPALAPNLI 146
+TS + + A+ YTDP PA F + D + + S RA PA ++ + L PN++
Sbjct: 300 ITSMQAVYVPADDYTDPAPATVFSHLDATISLERSIAERAIFPAVDPLASTSRILDPNIV 359
>sp|A9WGS4|ATPB_CHLAA ATP synthase subunit beta OS=Chloroflexus aurantiacus (strain ATCC
29366 / DSM 635 / J-10-fl) GN=atpD PE=3 SV=1
Length = 471
Score = 30.8 bits (68), Expect = 3.1, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 91 VTSECSSWPDANTYTDPLPA--FGYTDQELDMLVSYCSRASSPAAS--SAPAPALAPNLI 146
+TS + + A+ YTDP PA F + D + + S RA PA ++ + L PN++
Sbjct: 300 ITSMQAVYVPADDYTDPAPATVFSHLDATISLERSIAERAIFPAVDPLASTSRILDPNIV 359
>sp|Q80TZ3|AUXI_MOUSE Putative tyrosine-protein phosphatase auxilin OS=Mus musculus
GN=Dnajc6 PE=2 SV=2
Length = 938
Score = 29.6 bits (65), Expect = 6.2, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 16 MTCHRAYATESRSYDLNNNNMNNPNLGPCYG 46
+ C RA A E+R D N ++P++ P YG
Sbjct: 14 LACSRAAAGENRMKDSENKGASSPDMEPSYG 44
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.131 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,350,587
Number of Sequences: 539616
Number of extensions: 2073664
Number of successful extensions: 7257
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 7240
Number of HSP's gapped (non-prelim): 26
length of query: 147
length of database: 191,569,459
effective HSP length: 106
effective length of query: 41
effective length of database: 134,370,163
effective search space: 5509176683
effective search space used: 5509176683
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)