Query 045034
Match_columns 147
No_of_seqs 59 out of 61
Neff 3.2
Searched_HMMs 29240
Date Mon Mar 25 16:08:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045034.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045034hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hym_A CMTI-V, hydrolyzed cucu 30.4 18 0.00061 22.7 1.0 15 96-119 8-22 (45)
2 2nrg_A Intrinsic membrane prot 22.4 93 0.0032 22.1 3.6 30 23-54 49-78 (82)
3 1cq4_A Protein (serine protein 17.2 39 0.0013 20.9 0.7 15 96-119 3-17 (47)
4 1afh_A Maize nonspecific lipid 14.8 1.1E+02 0.0037 20.8 2.5 60 56-128 4-78 (93)
5 1to2_I Chymotrypsin inhibitor 14.5 50 0.0017 21.4 0.7 15 96-119 3-17 (64)
6 3rdy_A BWI-1=protease inhibito 14.3 50 0.0017 22.7 0.7 14 96-118 18-31 (79)
7 2alg_A Non-specific lipid tran 12.7 1.1E+02 0.0037 20.7 2.1 60 56-128 4-77 (92)
8 1l6h_A LTP2, non-specific lipi 12.1 1.1E+02 0.0038 19.7 1.8 18 77-95 17-35 (69)
9 1n89_A Lipid transfer protein; 11.8 1.2E+02 0.0041 19.4 2.0 18 77-95 16-34 (67)
10 1bwo_A NS-LTP1, nonspecific li 11.7 1.6E+02 0.0056 19.7 2.7 59 56-127 3-75 (90)
No 1
>1hym_A CMTI-V, hydrolyzed cucurbita maxima trypsin inhibitor V; hydrolase (serine proteinase); NMR {Cucurbita maxima} SCOP: d.40.1.1
Probab=30.45 E-value=18 Score=22.70 Aligned_cols=15 Identities=33% Similarity=0.614 Sum_probs=12.3
Q ss_pred CCCccCCCCCCCCCCCCCCchhhh
Q 045034 96 SSWPDANTYTDPLPAFGYTDQELD 119 (147)
Q Consensus 96 ~~WP~Mf~~~~~l~slgfT~eE~~ 119 (147)
++||.+ +|.+.+|+-
T Consensus 8 ~sWPEL---------VG~~~~~A~ 22 (45)
T 1hym_A 8 SSWPHL---------VGVGGSVAK 22 (45)
T ss_dssp SBCCCC---------TTSCHHHHH
T ss_pred CcChhh---------cCCcHHHHH
Confidence 469999 889888774
No 2
>2nrg_A Intrinsic membrane protein PUFX; BENT transmembrane helix, photosynthesis,membrane protein; NMR {Rhodobacter sphaeroides}
Probab=22.35 E-value=93 Score=22.07 Aligned_cols=30 Identities=17% Similarity=0.309 Sum_probs=17.6
Q ss_pred hhccccccCCCCCCCCCCCCCccCCCCCcchH
Q 045034 23 ATESRSYDLNNNNMNNPNLGPCYGPDSGQAYY 54 (147)
Q Consensus 23 ~~~~r~~~~~~~~~~~~~l~~rl~~~~~~~~~ 54 (147)
..-+|-+|-......+|+.+..+ +.++++.
T Consensus 49 ~~iG~~LPE~Sr~aP~P~~~~~~--~~~~~~~ 78 (82)
T 2nrg_A 49 RVVGRMLPIQENQAPAPNITGAL--ETGIELI 78 (82)
T ss_dssp HHHHHSSTTTTTCCSSSSSCSSS--SSSCCTT
T ss_pred HHHHHhCchhcccCCCCccchhH--HHHHHHH
Confidence 44566666554555666777766 5455543
No 3
>1cq4_A Protein (serine proteinase inhibitor 2); serine protease inhibitor, polyglutamine insertion mutant, subtilisin- chymotrypsin inhibitor-2; 1.80A {Hordeum vulgare} SCOP: d.40.1.1
Probab=17.23 E-value=39 Score=20.86 Aligned_cols=15 Identities=27% Similarity=0.729 Sum_probs=11.2
Q ss_pred CCCccCCCCCCCCCCCCCCchhhh
Q 045034 96 SSWPDANTYTDPLPAFGYTDQELD 119 (147)
Q Consensus 96 ~~WP~Mf~~~~~l~slgfT~eE~~ 119 (147)
++||++ +|-..+|+-
T Consensus 3 ~sWPEL---------VG~~~~~A~ 17 (47)
T 1cq4_A 3 TEWPEL---------VGKSVEEAK 17 (47)
T ss_dssp CBCGGG---------TTSBHHHHH
T ss_pred cCChhh---------cCccHHHHH
Confidence 579999 788766653
No 4
>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*
Probab=14.82 E-value=1.1e+02 Score=20.76 Aligned_cols=60 Identities=17% Similarity=0.464 Sum_probs=35.4
Q ss_pred HhhhhhcCcchHHHHHHHHHhCccCc--hhhhHHHHHHhh------------cCCCCccCCCCCCCCCCC-CCCchhhhh
Q 045034 56 CFKAIQGLNSCSNLIAKFFTVSRSDI--AQCCSAIDRVTS------------ECSSWPDANTYTDPLPAF-GYTDQELDM 120 (147)
Q Consensus 56 CWssL~~l~sCt~EI~~fflnGq~~l--~~CC~AI~~I~~------------~C~~WP~Mf~~~~~l~sl-gfT~eE~~~ 120 (147)
|=..+..+..|.. ++.|.... .+||.+++.+.. .| = ++. ...+ |+...-+.-
T Consensus 4 C~~v~~~L~pCl~-----y~~~~~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC--~-~~~-----~~~~~~in~~~A~~ 70 (93)
T 1afh_A 4 CGQVASAIAPCIS-----YARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--L-KNA-----AAGVSGLNAGNAAS 70 (93)
T ss_dssp SHHHHHHHGGGHH-----HHTTSCCSCCHHHHHHHHHHHHHCCSSHHHHHHHHH--H-HHH-----HTTSTTCCHHHHHH
T ss_pred hHHHHHhccCcHH-----HHcCCCCCChHHHHHHHHHHHHhhcCCCCCcccCEe--e-ccc-----cccccCcCHHHHHH
Confidence 3344444555543 44555444 689999999952 44 1 110 1223 677777788
Q ss_pred HhhhhcCC
Q 045034 121 LVSYCSRA 128 (147)
Q Consensus 121 LrgyC~~~ 128 (147)
|-+-|.-.
T Consensus 71 LP~~C~v~ 78 (93)
T 1afh_A 71 IPSKCGVS 78 (93)
T ss_dssp HHHHHHCC
T ss_pred HHHHcCCC
Confidence 88888654
No 5
>1to2_I Chymotrypsin inhibitor 2; serine protease, hydrolase; HET: CIT 15P; 1.30A {Hordeum vulgare subsp} SCOP: d.40.1.1 PDB: 1tm3_I* 1tm5_I* 1tm1_I* 1tm7_I* 1tm4_I* 1y4a_I* 1y4d_I 1tmg_I* 1lw6_I 1y3b_I* 1y1k_I* 1y34_I* 1y48_I* 1y3d_I* 1y3c_I* 1y33_I* 1to1_I* 1y3f_I* 3ci2_A 1coa_I ...
Probab=14.52 E-value=50 Score=21.37 Aligned_cols=15 Identities=27% Similarity=0.729 Sum_probs=12.1
Q ss_pred CCCccCCCCCCCCCCCCCCchhhh
Q 045034 96 SSWPDANTYTDPLPAFGYTDQELD 119 (147)
Q Consensus 96 ~~WP~Mf~~~~~l~slgfT~eE~~ 119 (147)
++||++ +|-+.+|+.
T Consensus 3 ~sWPEL---------VG~~~~~A~ 17 (64)
T 1to2_I 3 TEWPEL---------VGKSVEEAK 17 (64)
T ss_dssp CBCGGG---------TTSBHHHHH
T ss_pred cCCHhh---------CCCcHHHHH
Confidence 579999 888877765
No 6
>3rdy_A BWI-1=protease inhibitor/trypsin inhibitor; serine protease inhibitor, potato inhibitor I, trypsin inhib trypsin, hydrolase inhibitor; 1.84A {Fagopyrum esculentum} SCOP: d.40.1.0 PDB: 3rdz_C
Probab=14.34 E-value=50 Score=22.73 Aligned_cols=14 Identities=21% Similarity=0.662 Sum_probs=12.2
Q ss_pred CCCccCCCCCCCCCCCCCCchhh
Q 045034 96 SSWPDANTYTDPLPAFGYTDQEL 118 (147)
Q Consensus 96 ~~WP~Mf~~~~~l~slgfT~eE~ 118 (147)
++||++ +|.+.+|+
T Consensus 18 ~sWPEL---------VG~~~~~A 31 (79)
T 3rdy_A 18 QEWPEL---------VGERGSKA 31 (79)
T ss_dssp CBCGGG---------TTSBHHHH
T ss_pred CcChHH---------CCcCHHHH
Confidence 679999 89998886
No 7
>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*
Probab=12.72 E-value=1.1e+02 Score=20.69 Aligned_cols=60 Identities=18% Similarity=0.461 Sum_probs=35.7
Q ss_pred HhhhhhcCcchHHHHHHHHHhCccCc-hhhhHHHHHHh-------h-----cCCCCccCCCCCCCCCCC-CCCchhhhhH
Q 045034 56 CFKAIQGLNSCSNLIAKFFTVSRSDI-AQCCSAIDRVT-------S-----ECSSWPDANTYTDPLPAF-GYTDQELDML 121 (147)
Q Consensus 56 CWssL~~l~sCt~EI~~fflnGq~~l-~~CC~AI~~I~-------~-----~C~~WP~Mf~~~~~l~sl-gfT~eE~~~L 121 (147)
|=..+..|..|.. |+..|. .- ++||.+++.+. + .| ==.. .+.+ |+...-+.-|
T Consensus 4 C~~v~~~L~pCl~----y~~~~~-~p~~~CC~~lk~l~~~a~t~~d~~~~ClC--~~~~------~~~~~~in~~~A~~L 70 (92)
T 2alg_A 4 CGQVSSSLAPCIP----YVRGGG-AVPPACCNGIRNVNNLARTTPDRQAACNC--LKQL------SASVPGVNPNNAAAL 70 (92)
T ss_dssp HHHHHHHHGGGHH----HHHHCS-CCCHHHHHHHHHHHHHCCSHHHHHHHHHH--HHHH------HHHSTTCCHHHHHHH
T ss_pred hHHHHHhccCcHH----HHcCCC-CCCHHHHHHHHHHHhhhcccCCCCcCCcc--ccCc------ccccCccChHHHHHH
Confidence 4444555556654 333343 35 89999999975 3 44 1011 2233 6777778888
Q ss_pred hhhhcCC
Q 045034 122 VSYCSRA 128 (147)
Q Consensus 122 rgyC~~~ 128 (147)
-+-|.-.
T Consensus 71 P~~Cgv~ 77 (92)
T 2alg_A 71 PGKCGVS 77 (92)
T ss_dssp HHHTTCC
T ss_pred HHHcCCC
Confidence 8888653
No 8
>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1
Probab=12.08 E-value=1.1e+02 Score=19.70 Aligned_cols=18 Identities=28% Similarity=0.693 Sum_probs=13.5
Q ss_pred CccCc-hhhhHHHHHHhhcC
Q 045034 77 SRSDI-AQCCSAIDRVTSEC 95 (147)
Q Consensus 77 Gq~~l-~~CC~AI~~I~~~C 95 (147)
|...- ++||.+++.. ..|
T Consensus 17 ~~~~Ps~~CC~~lk~~-~~C 35 (69)
T 1l6h_A 17 GGARPTAACCSSLRAQ-QGC 35 (69)
T ss_dssp TCCSTTHHHHHHHHHH-HHH
T ss_pred CCCCCCHHHHHhhCCC-CCC
Confidence 33345 9999999986 677
No 9
>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*
Probab=11.83 E-value=1.2e+02 Score=19.38 Aligned_cols=18 Identities=22% Similarity=0.682 Sum_probs=13.4
Q ss_pred CccCc-hhhhHHHHHHhhcC
Q 045034 77 SRSDI-AQCCSAIDRVTSEC 95 (147)
Q Consensus 77 Gq~~l-~~CC~AI~~I~~~C 95 (147)
|...- ++||.+++.. ..|
T Consensus 16 ~~~~Ps~~CC~~lk~~-~~C 34 (67)
T 1n89_A 16 SGAKPSGECCGNLRAQ-QGC 34 (67)
T ss_dssp TCCCCCHHHHHHHHHH-SSH
T ss_pred CCCCCCHHHHHhhCCC-CCC
Confidence 33345 9999999986 677
No 10
>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*
Probab=11.67 E-value=1.6e+02 Score=19.74 Aligned_cols=59 Identities=12% Similarity=0.384 Sum_probs=35.3
Q ss_pred HhhhhhcCcchHHHHHHHHHhCccCc-hhhhHHHHHHhh------------cCCCCccCCCCCCCCCCC-CCCchhhhhH
Q 045034 56 CFKAIQGLNSCSNLIAKFFTVSRSDI-AQCCSAIDRVTS------------ECSSWPDANTYTDPLPAF-GYTDQELDML 121 (147)
Q Consensus 56 CWssL~~l~sCt~EI~~fflnGq~~l-~~CC~AI~~I~~------------~C~~WP~Mf~~~~~l~sl-gfT~eE~~~L 121 (147)
|=..+..+..|.. ++.|...- ++||.+++.+.+ .| --.. ..++ |+...-+.-|
T Consensus 3 C~~v~~~L~pCl~-----y~~~~~~Ps~~CC~~lk~l~~~a~t~~dr~~~ClC--lk~~------~~~~~~in~~~A~~L 69 (90)
T 1bwo_A 3 CGHVDSLVRPCLS-----YVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNC--LKGI------ARGIHNLNEDNARSI 69 (90)
T ss_dssp HHHHHHHHGGGHH-----HHTTCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHH--HHHH------HTTCTTCCHHHHHTH
T ss_pred HHHHHHhhcccHH-----HHcCCCCCCHHHhHHHHHHHhhccCCCCCCccCcC--ccCc------hhccCCcCHHHHHHH
Confidence 4444455555543 33443335 899999999763 44 2111 2333 6777777888
Q ss_pred hhhhcC
Q 045034 122 VSYCSR 127 (147)
Q Consensus 122 rgyC~~ 127 (147)
-+-|.-
T Consensus 70 P~~C~v 75 (90)
T 1bwo_A 70 PPKCGV 75 (90)
T ss_dssp HHHHTC
T ss_pred HHHcCC
Confidence 888865
Done!