Query 045035
Match_columns 95
No_of_seqs 137 out of 1170
Neff 5.5
Searched_HMMs 13730
Date Mon Mar 25 16:09:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045035.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045035hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1cyoa_ d.120.1.1 (A:) Cytochr 99.6 1.3E-17 9.5E-22 106.4 0.3 47 1-47 29-85 (88)
2 d1euea_ d.120.1.1 (A:) Cytochr 99.6 4E-17 2.9E-21 103.7 -0.1 46 1-46 29-84 (86)
3 d1kbia2 d.120.1.1 (A:1-97) Fla 99.6 4.3E-16 3.1E-20 101.0 2.9 46 1-47 33-90 (97)
4 d1cxya_ d.120.1.1 (A:) Cytochr 99.5 5.3E-16 3.9E-20 97.3 -0.4 33 1-33 27-59 (81)
5 d1soxa2 d.120.1.1 (A:3-93) Sul 99.5 3.7E-15 2.7E-19 95.2 1.3 47 1-47 28-86 (91)
6 d1mj4a_ d.120.1.1 (A:) Sulfite 99.4 1.4E-14 1E-18 90.4 0.8 37 1-37 28-66 (80)
7 d1t0ga_ d.120.1.2 (A:) Putativ 92.1 0.017 1.3E-06 36.7 0.7 31 1-33 37-68 (109)
8 d1ho8a_ a.118.1.9 (A:) Regulat 46.8 0.85 6.2E-05 35.0 -2.1 33 2-36 424-456 (477)
9 d2ckca1 d.76.2.1 (A:2563-2622) 38.7 1.4 0.0001 24.9 -1.5 12 3-14 28-39 (60)
10 d1v54g_ f.23.2.1 (G:) Mitochon 37.5 26 0.0019 20.4 4.2 23 65-87 12-35 (84)
11 d2ckaa1 d.76.2.1 (A:2028-2085) 37.1 1.5 0.00011 24.5 -1.5 12 3-14 30-41 (58)
12 d1rc2a_ f.19.1.1 (A:) Aquapori 30.3 17 0.0012 23.7 2.8 23 72-94 206-229 (231)
13 d1ee0a2 c.95.1.2 (A:236-395) P 28.2 9.5 0.00069 24.3 1.1 20 2-22 65-84 (160)
14 d1u0ua2 c.95.1.2 (A:238-393) D 24.4 13 0.00095 23.4 1.2 15 8-22 66-80 (156)
15 d2v0fa1 d.76.2.1 (A:2629-2715) 20.8 5.1 0.00037 24.0 -1.3 12 3-14 40-51 (87)
No 1
>d1cyoa_ d.120.1.1 (A:) Cytochrome b5 {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.63 E-value=1.3e-17 Score=106.42 Aligned_cols=47 Identities=57% Similarity=1.006 Sum_probs=43.4
Q ss_pred CcccccCcccCCChHHHHHhhcCCCcchhhhhcCCCC----------CCCCCCCCCC
Q 045035 1 VYEVTKFLEDHPGGDEVFLSVTGKDATDDFEDVGHSP----------IGEIDVSTIP 47 (95)
Q Consensus 1 VYDvt~fl~~HPGG~~vi~~~aGkDaT~~f~~~~Hs~----------VG~l~~~~~~ 47 (95)
|||||+|++.||||.++|+.++|+|+|+.|+.++||. ||+|.+++.+
T Consensus 29 VYDvT~f~~~HPGG~~~i~~~aG~D~T~~F~~~~hs~~a~~~l~~~~IG~l~~~~~~ 85 (88)
T d1cyoa_ 29 VYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGELHPDDRS 85 (88)
T ss_dssp EEECTTTTTTCTTCSHHHHHHTTSBCHHHHHHTTCCHHHHHHHTTTEEEEECGGGGG
T ss_pred EEecchhhcccCCchHHHHHHcCCchHHHHHHHCCCHHHHHHHHcCccEEECccccC
Confidence 7999999999999999999999999999999998887 9999876543
No 2
>d1euea_ d.120.1.1 (A:) Cytochrome b5 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.59 E-value=4e-17 Score=103.72 Aligned_cols=46 Identities=52% Similarity=1.130 Sum_probs=42.5
Q ss_pred CcccccCcccCCChHHHHHhhcCCCcchhhhhcCCCC----------CCCCCCCCC
Q 045035 1 VYEVTKFLEDHPGGDEVFLSVTGKDATDDFEDVGHSP----------IGEIDVSTI 46 (95)
Q Consensus 1 VYDvt~fl~~HPGG~~vi~~~aGkDaT~~f~~~~Hs~----------VG~l~~~~~ 46 (95)
|||||+|+.+||||.++|+.++|+|+|+.|+.++||. ||+|.+++.
T Consensus 29 VYDvT~f~~~HPGG~~~i~~~aG~D~T~~f~~~hhs~~a~~~l~~~~IG~l~~~~~ 84 (86)
T d1euea_ 29 VYDITRFLSEHPGGEEILLEQAGADATESFEDIGHSPDAREMLKQYYIGDVHPNDL 84 (86)
T ss_dssp EEECGGGGGGCTTCSHHHHTTTTSBCHHHHHHHTCCHHHHHHGGGGEEEEECGGGC
T ss_pred EEecceeeeccCcchHHHHHHCCcCHHHHHHHhCCCHHHHHHHHhCcceEECcccC
Confidence 7999999999999999999999999999999998877 999987653
No 3
>d1kbia2 d.120.1.1 (A:1-97) Flavocytochrome b2, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.56 E-value=4.3e-16 Score=101.00 Aligned_cols=46 Identities=46% Similarity=0.849 Sum_probs=42.0
Q ss_pred CcccccCcccCCChHHHHHhhcCCCcchhhhhcCCCC------------CCCCCCCCCC
Q 045035 1 VYEVTKFLEDHPGGDEVFLSVTGKDATDDFEDVGHSP------------IGEIDVSTIP 47 (95)
Q Consensus 1 VYDvt~fl~~HPGG~~vi~~~aGkDaT~~f~~~~Hs~------------VG~l~~~~~~ 47 (95)
|||||+|+++||||.++|+.++|+|+|+.|+.+ |+. ||.|.++..+
T Consensus 33 VYDvT~f~~~HPGG~~~i~~~aG~D~T~~f~~~-H~~~~~~~~~l~~~~IG~l~~~~~~ 90 (97)
T d1kbia2 33 VYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPL-HAPNVIDKYIAPEKKLGPLQGSMPP 90 (97)
T ss_dssp EEECTTTGGGCTTCHHHHHTTTTSBCHHHHGGG-SCTTHHHHHSCGGGEEEEBCSCCCT
T ss_pred EEecchhhhhCCChHHHHHHHcCccHHHHHHHH-CcHHHHHHHHhhcceeEEeCCCCCC
Confidence 799999999999999999999999999999999 875 8999876544
No 4
>d1cxya_ d.120.1.1 (A:) Cytochrome b558 {Ectothiorhodospira vacuolata [TaxId: 1054]}
Probab=99.50 E-value=5.3e-16 Score=97.30 Aligned_cols=33 Identities=30% Similarity=0.698 Sum_probs=32.0
Q ss_pred CcccccCcccCCChHHHHHhhcCCCcchhhhhc
Q 045035 1 VYEVTKFLEDHPGGDEVFLSVTGKDATDDFEDV 33 (95)
Q Consensus 1 VYDvt~fl~~HPGG~~vi~~~aGkDaT~~f~~~ 33 (95)
|||||+|+++||||+++|+.++|+|+|+.|+..
T Consensus 27 VYDvT~f~~~HPGG~~~l~~~aGkD~t~~F~~~ 59 (81)
T d1cxya_ 27 VYDLTPYVPNHPGPAGMMLVWCGQESTEAWETK 59 (81)
T ss_dssp EEECTTTGGGCCSSTTTTGGGTTSBCHHHHHHT
T ss_pred EEeccceeecCCCcHHHHHHHcCCcchHHHHhc
Confidence 799999999999999999999999999999877
No 5
>d1soxa2 d.120.1.1 (A:3-93) Sulfite oxidase, N-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=99.47 E-value=3.7e-15 Score=95.17 Aligned_cols=47 Identities=34% Similarity=0.606 Sum_probs=40.1
Q ss_pred CcccccCcccCCChHHHHHhhcCCCcchhhhh--cCCCC----------CCCCCCCCCC
Q 045035 1 VYEVTKFLEDHPGGDEVFLSVTGKDATDDFED--VGHSP----------IGEIDVSTIP 47 (95)
Q Consensus 1 VYDvt~fl~~HPGG~~vi~~~aGkDaT~~f~~--~~Hs~----------VG~l~~~~~~ 47 (95)
|||||+|++.||||..+|+.++|+|+|+.|.. .+|+. ||+|.+++.+
T Consensus 28 VYDvT~f~~~HPGG~~~i~~~~G~D~t~~~~~~~~~~~~~a~~~l~~~~IG~l~~~~~~ 86 (91)
T d1soxa2 28 VFDVTDFVELHPGGPDKILLAAGGALEPFWALYAVHGEPHVLELLQQYKVGELSPDEAP 86 (91)
T ss_dssp EEECTTTTTTSTTCHHHHGGGTTSBSHHHHHHSGGGGSHHHHHHHHTTEEEEECCCCCC
T ss_pred EEeccceecccCCcHHHHHHHcCCcccHhHhhccccCcHHHHHHHHcCeeEEecCccCC
Confidence 79999999999999999999999999997753 35665 9999876544
No 6
>d1mj4a_ d.120.1.1 (A:) Sulfite oxidase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=1.4e-14 Score=90.40 Aligned_cols=37 Identities=27% Similarity=0.534 Sum_probs=32.5
Q ss_pred CcccccCcccCCChHHHHHhhcCCCcchhhh--hcCCCC
Q 045035 1 VYEVTKFLEDHPGGDEVFLSVTGKDATDDFE--DVGHSP 37 (95)
Q Consensus 1 VYDvt~fl~~HPGG~~vi~~~aGkDaT~~f~--~~~Hs~ 37 (95)
|||||+|+++||||.++|+.++|+|+|+.|. ..+||.
T Consensus 28 VYDvT~f~~~HPGG~~~i~~~~G~D~t~~~~~~~~h~s~ 66 (80)
T d1mj4a_ 28 VFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHNQS 66 (80)
T ss_dssp EEECTTTGGGSTTCHHHHHTTTTSBSHHHHTTCGGGCSH
T ss_pred EEeeeeeHhhcCChhHHHHHHcCCCcchhhhcccccCcH
Confidence 7999999999999999999999999998654 555664
No 7
>d1t0ga_ d.120.1.2 (A:) Putative steroid binding protein AT2G24940 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=92.10 E-value=0.017 Score=36.72 Aligned_cols=31 Identities=32% Similarity=0.513 Sum_probs=23.6
Q ss_pred CcccccCcc-cCCChHHHHHhhcCCCcchhhhhc
Q 045035 1 VYEVTKFLE-DHPGGDEVFLSVTGKDATDDFEDV 33 (95)
Q Consensus 1 VYDvt~fl~-~HPGG~~vi~~~aGkDaT~~f~~~ 33 (95)
|||||+=-+ .=|||. -..+||+|+|..|...
T Consensus 37 VyDVt~~~~~ygpgg~--Y~~faG~D~sral~~~ 68 (109)
T d1t0ga_ 37 VFDVTTGKSFYGSGGD--YSMFAGKDASRALGKM 68 (109)
T ss_dssp EEECGGGTTTSTTTCT--TTTTTTEECHHHHHHT
T ss_pred EEEccCCcceECCCCc--ccccccccHHHHHHhc
Confidence 799996433 338887 3567999999999765
No 8
>d1ho8a_ a.118.1.9 (A:) Regulatory subunit H of the V-type ATPase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=46.82 E-value=0.85 Score=35.02 Aligned_cols=33 Identities=30% Similarity=0.361 Sum_probs=24.9
Q ss_pred cccccCcccCCChHHHHHhhcCCCcchhhhhcCCC
Q 045035 2 YEVTKFLEDHPGGDEVFLSVTGKDATDDFEDVGHS 36 (95)
Q Consensus 2 YDvt~fl~~HPGG~~vi~~~aGkDaT~~f~~~~Hs 36 (95)
||+..|+..||.|..++.+..+|+ ..++-..|+
T Consensus 424 ~DiGefvr~~P~gr~il~~lg~K~--~vM~Lm~h~ 456 (477)
T d1ho8a_ 424 NDITHVVELLPESIDVLDKTGGKA--DIMELLNHS 456 (477)
T ss_dssp HHHHHHHHHCTTHHHHHHHHSHHH--HHHHHTSCS
T ss_pred hhHHHHHHHCcchhHHHHHcCcHH--HHHHHhcCC
Confidence 799999999999999999887764 334333453
No 9
>d2ckca1 d.76.2.1 (A:2563-2622) Chromodomain-helicase-DNA-binding protein 7, CHD7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.65 E-value=1.4 Score=24.86 Aligned_cols=12 Identities=25% Similarity=0.529 Sum_probs=8.7
Q ss_pred ccccCcccCCCh
Q 045035 3 EVTKFLEDHPGG 14 (95)
Q Consensus 3 Dvt~fl~~HPGG 14 (95)
|+..||++||+=
T Consensus 28 ~L~~WL~~hP~y 39 (60)
T d2ckca1 28 DLVEWLKLHPTY 39 (60)
T ss_dssp HHHHHHHHCTTE
T ss_pred HHHHHHHHCCCc
Confidence 456788888874
No 10
>d1v54g_ f.23.2.1 (G:) Mitochondrial cytochrome c oxidase subunit VIa {Cow (Bos taurus) [TaxId: 9913]}
Probab=37.53 E-value=26 Score=20.45 Aligned_cols=23 Identities=13% Similarity=-0.159 Sum_probs=14.0
Q ss_pred ChhHHHHHHHH-HHHHHHHHHHHH
Q 045035 65 TSEFIIRLLQF-LVPLAILGLAVG 87 (95)
Q Consensus 65 ~~~~~~~~~~~-~vpl~~~~~~~~ 87 (95)
....|.++..+ .+|.++|+..-+
T Consensus 12 ~~~lWkkis~~va~P~i~l~~~n~ 35 (84)
T d1v54g_ 12 GARTWRFLTFGLALPSVALCTLNS 35 (84)
T ss_dssp CHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46778877653 457666655433
No 11
>d2ckaa1 d.76.2.1 (A:2028-2085) Chromodomain-helicase-dna-binding protein 8, CHD8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.05 E-value=1.5 Score=24.55 Aligned_cols=12 Identities=33% Similarity=0.581 Sum_probs=9.7
Q ss_pred ccccCcccCCCh
Q 045035 3 EVTKFLEDHPGG 14 (95)
Q Consensus 3 Dvt~fl~~HPGG 14 (95)
|+..||++||+=
T Consensus 30 ~L~~WL~~nP~y 41 (58)
T d2ckaa1 30 ELEMWLQGHPEF 41 (58)
T ss_dssp HHHHHHHHCTTE
T ss_pred HHHHHHHHCCCC
Confidence 567899999985
No 12
>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]}
Probab=30.27 E-value=17 Score=23.71 Aligned_cols=23 Identities=13% Similarity=0.115 Sum_probs=17.1
Q ss_pred HHHHHHHHH-HHHHHHHHHHHhcC
Q 045035 72 LLQFLVPLA-ILGLAVGIRIYTRS 94 (95)
Q Consensus 72 ~~~~~vpl~-~~~~~~~~~~~~~~ 94 (95)
+.+|+.|++ .+..++.|+++.++
T Consensus 206 wvy~~~P~~Ga~~a~~ly~~~~~~ 229 (231)
T d1rc2a_ 206 WFFWVVPIVGGIIGGLIYRTLLEK 229 (231)
T ss_dssp THHHHHHHHHHHHHHHHHHHSSSC
T ss_pred eEEehHHHHHHHHHHHHHHHHhcC
Confidence 467999999 56667788877655
No 13
>d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]}
Probab=28.18 E-value=9.5 Score=24.31 Aligned_cols=20 Identities=30% Similarity=0.609 Sum_probs=14.1
Q ss_pred cccccCcccCCChHHHHHhhc
Q 045035 2 YEVTKFLEDHPGGDEVFLSVT 22 (95)
Q Consensus 2 YDvt~fl~~HPGG~~vi~~~a 22 (95)
.|+. |.--||||..+|....
T Consensus 65 ~di~-~~v~Hqgg~~Ild~i~ 84 (160)
T d1ee0a2 65 WNSV-FWMVHPGGRAILDQVE 84 (160)
T ss_dssp GGGS-EEEECCSSHHHHHHHH
T ss_pred cccc-eEeecCCcHHHHHHHH
Confidence 3554 4458999999887764
No 14
>d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]}
Probab=24.37 E-value=13 Score=23.36 Aligned_cols=15 Identities=33% Similarity=0.561 Sum_probs=11.5
Q ss_pred cccCCChHHHHHhhc
Q 045035 8 LEDHPGGDEVFLSVT 22 (95)
Q Consensus 8 l~~HPGG~~vi~~~a 22 (95)
.--||||..+|...+
T Consensus 66 ~i~Hqgg~~Ild~v~ 80 (156)
T d1u0ua2 66 WVVHPGGRAILDRVE 80 (156)
T ss_dssp EEECCSCHHHHHHHH
T ss_pred EeecCCcHHHHHHHH
Confidence 347999998887664
No 15
>d2v0fa1 d.76.2.1 (A:2629-2715) Chromodomain-helicase-DNA-binding protein 7, CHD7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.85 E-value=5.1 Score=23.99 Aligned_cols=12 Identities=25% Similarity=0.667 Sum_probs=10.0
Q ss_pred ccccCcccCCCh
Q 045035 3 EVTKFLEDHPGG 14 (95)
Q Consensus 3 Dvt~fl~~HPGG 14 (95)
|+.+||++||+=
T Consensus 40 ~L~~WL~~nP~y 51 (87)
T d2v0fa1 40 DLPRWLEENPEF 51 (87)
T ss_dssp GHHHHHHHCTTE
T ss_pred HHHHHHHHCCCc
Confidence 567899999986
Done!