Your job contains 1 sequence.
>045051
MKTLVEEFSGSMKNPLQFDRGSVSTYSNRNHVDKFKLKQSREPIDPPLPPSASLQNNQNP
PSDSDSSSTMSSYGDPADICELSNTTLKFISEILMEEDLEGKTCMLQDCLALQAAEKSFY
DVLGQKYPPSPNQISPCSSRNSETLNDYCTSGSTSVNNLFEPNWMSNQGDSSSSITQTNL
FNSPESVLVPNLFSTGSSFLLNDNTAIINSTSDSAKSPEGEDRTYSSPYGSRGRKYDELE
DSDYLEEGRSNKQSALSPPENEPLEMYDEVVLCKCENNKSTVCLIHGYVQNGSSGKLQQN
GQPKGSSSATTRSRRKGKKSEVVDLWTLLTLCAQAVANYDQRTANDFLKQIRQHSSPFGD
GIQRLAHYFANGLEVRLAGTRTPVQTHLASSRASAAEVLQAYKVYVSSCPFNRMTFFMAN
RMILKLAEKATRLHIVDFGIGYGFQWPCLIQRISKRPGGPPKIRMTAIEFPQPGFKPAER
VEETGHRLKCYSQRFGVPFEYNTIAQKWQNIQLEDLKIDREEMTVVNCLYRMRNLPDDTV
VINSPRDAVLELIKKINPDIFIHGVVNGTYNAPFFLPRFREALFHFSTFFDMFESTVPRE
DQGRMIFEREIYGKDAMNVIACEGIERVERPETYKQWQARNLRAGFKQLELDKDILKTIR
TLVKSNFHPDFVIDEAGEWMLQGWKGRLAYALSFWKPVQD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 045051
(700 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2040701 - symbol:AT2G37650 species:3702 "Arabi... 1227 5.5e-143 2
TAIR|locus:2025022 - symbol:SCL14 "SCARECROW-like 14" spe... 1324 3.7e-135 1
TAIR|locus:2148293 - symbol:AT5G59450 species:3702 "Arabi... 1207 7.5e-135 2
TAIR|locus:2075155 - symbol:AT3G46600 species:3702 "Arabi... 1165 1.8e-131 2
TAIR|locus:2025032 - symbol:AT1G07520 "AT1G07520" species... 1167 1.6e-118 1
TAIR|locus:2008076 - symbol:SCL5 "AT1G50600" species:3702... 543 2.1e-52 1
TAIR|locus:2164783 - symbol:PAT1 "AT5G48150" species:3702... 534 1.9e-51 1
TAIR|locus:2026982 - symbol:SCL1 "AT1G21450" species:3702... 513 2.0e-51 2
TAIR|locus:2044973 - symbol:SCL21 "AT2G04890" species:370... 514 2.5e-49 1
TAIR|locus:2099624 - symbol:RGL2 "RGA-like 2" species:370... 463 9.4e-44 1
TAIR|locus:2006747 - symbol:GAI "GIBBERELLIC ACID INSENSI... 441 3.2e-41 1
TAIR|locus:2201557 - symbol:RGL1 "RGA-like 1" species:370... 436 1.2e-40 1
TAIR|locus:2174974 - symbol:AT5G66770 "AT5G66770" species... 435 1.5e-40 1
TAIR|locus:2080345 - symbol:SCR "SCARECROW" species:3702 ... 435 8.0e-39 2
TAIR|locus:2157477 - symbol:RGL3 "RGA-like protein 3" spe... 414 3.4e-38 1
TAIR|locus:2005516 - symbol:RGA1 "REPRESSOR OF GA1-3 1" s... 415 6.4e-37 1
TAIR|locus:2008086 - symbol:SCL3 "AT1G50420" species:3702... 241 4.4e-33 2
TAIR|locus:2101694 - symbol:AT3G50650 "AT3G50650" species... 359 2.1e-30 1
TAIR|locus:2184625 - symbol:SCL8 "AT5G52510" species:3702... 351 4.7e-29 1
TAIR|locus:2132482 - symbol:AT4G08250 "AT4G08250" species... 342 5.1e-29 1
TAIR|locus:2120106 - symbol:SHR "AT4G37650" species:3702 ... 342 1.8e-28 1
TAIR|locus:2015243 - symbol:AT1G63100 "AT1G63100" species... 342 5.2e-28 1
TAIR|locus:2020487 - symbol:LAS "AT1G55580" species:3702 ... 286 2.4e-26 2
TAIR|locus:2165685 - symbol:AT5G41920 "AT5G41920" species... 296 7.8e-25 1
TAIR|locus:2083073 - symbol:AT3G49950 "AT3G49950" species... 293 6.6e-24 1
UNIPROTKB|Q84MM9 - symbol:MOC1 "Protein MONOCULM 1" speci... 197 4.3e-20 2
TAIR|locus:2087994 - symbol:AT3G13840 "AT3G13840" species... 203 6.4e-13 1
TAIR|locus:2055622 - symbol:HAM1 "AT2G45160" species:3702... 181 2.5e-10 1
TAIR|locus:1009023400 - symbol:AT5G67411 "AT5G67411" spec... 156 3.0e-10 1
TAIR|locus:2115340 - symbol:HAM4 "AT4G36710" species:3702... 171 1.9e-09 1
TAIR|locus:2101801 - symbol:HAM2 "AT3G60630" species:3702... 165 1.7e-08 2
TAIR|locus:2126901 - symbol:HAM3 "AT4G00150" species:3702... 159 4.9e-08 1
UNIPROTKB|Q6DLS1 - symbol:SCL1 "SCARECROW-like protein" s... 135 1.5e-05 1
UNIPROTKB|Q1AHE4 - symbol:SCL "SCARECROW-like protein" sp... 99 0.00039 1
>TAIR|locus:2040701 [details] [associations]
symbol:AT2G37650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:AC004684 Pfam:PF03514 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
eggNOG:NOG319005 EMBL:AF036306 IPI:IPI00536640 PIR:T02531
PIR:T51240 RefSeq:NP_181301.1 UniGene:At.26205 UniGene:At.66411
PaxDb:O80933 PRIDE:O80933 EnsemblPlants:AT2G37650.1 GeneID:818342
KEGG:ath:AT2G37650 GeneFarm:4256 TAIR:At2g37650 InParanoid:O80933
OMA:WERVERP PhylomeDB:O80933 ProtClustDB:CLSN2912903
Genevestigator:O80933 Uniprot:O80933
Length = 718
Score = 1227 (437.0 bits), Expect = 5.5e-143, Sum P(2) = 5.5e-143
Identities = 234/407 (57%), Positives = 294/407 (72%)
Query: 291 NGSSGKLQQNGQPKGSSSATTRSRRKGKKSEVVDLWTLLTLCAQAVANYDQRTANDFLKQ 350
+ GK + G+ +G + GKK EVVDL +LL CAQAVA D+R A LKQ
Sbjct: 312 DAQGGKRRARGRGRGRGRGGGGGQN-GKK-EVVDLRSLLIHCAQAVAADDRRCAGQLLKQ 369
Query: 351 IRQHSSPFGDGIQRLAHYFANGLEVRLAGTRTPVQTHLASSRASAAEVLQAYKVYVSSCP 410
IR HS+PFGDG QRLAH FANGLE RLAGT + + + S SAA VL+A++++++ CP
Sbjct: 370 IRLHSTPFGDGNQRLAHCFANGLEARLAGTGSQIYKGIVSKPRSAAAVLKAHQLFLACCP 429
Query: 411 FNRMTFFMANRMILKLAEKATRLHIVDFGIGYGFQWPCLIQRISKRPGGPPKIRMTAIEF 470
F ++++F+ N+ I L + R+H++DFGI YGFQWP LI R S G PK+R+T IEF
Sbjct: 430 FRKLSYFITNKTIRDLVGNSQRVHVIDFGILYGFQWPTLIHRFSMY--GSPKVRITGIEF 487
Query: 471 PQPGFKPAERVEETGHRLKCYSQRFGVPFEYNTIAQKWQNIQLEDLKIDREEMTVVNCLY 530
PQPGF+PA+RVEETG RL Y++ FGVPFEY IA+KW IQLEDL IDR+E+TVVNCLY
Sbjct: 488 PQPGFRPAQRVEETGQRLAAYAKLFGVPFEYKAIAKKWDAIQLEDLDIDRDEITVVNCLY 547
Query: 531 RMRNLPDDTVVINSPRDAVLELIKKINPDIFIHGVVNGTYNAPFFLPRFREALFHFSTFF 590
R NL D++V + S RD VL LI KINPD+F+ G+VNG YNAPFF+ RFREALFHFS+ F
Sbjct: 548 RAENLHDESVKVESCRDTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRFREALFHFSSIF 607
Query: 591 DMFESTVPREDQGRMIFEREIYGKDAMNVIACEGIERVERPETYKQWQARNLRAGFKQLE 650
DM E+ VPRED+ RM E E++G++A+NVIACEG ERVERPETYKQW R +R+G Q+
Sbjct: 608 DMLETIVPREDEERMFLEMEVFGREALNVIACEGWERVERPETYKQWHVRAMRSGLVQVP 667
Query: 651 LDKDILKTIRTLVKSNFHPDFVIDEAGEWMLQGWKGRLAYALSFWKP 697
D I+KT V + +H DFVID+ W+LQGWKGR ALS WKP
Sbjct: 668 FDPSIMKTSLHKVHTFYHKDFVIDQDNRWLLQGWKGRTVMALSVWKP 714
Score = 192 (72.6 bits), Expect = 5.5e-143, Sum P(2) = 5.5e-143
Identities = 36/72 (50%), Positives = 52/72 (72%)
Query: 75 DPADICELSNTTLKFISEILMEEDLEGKTCMLQDCLALQAAEKSFYDVLGQKYPPSPNQI 134
DPAD + S+ L +IS++L EED++ K CMLQ+ L L+AAE+S Y+ +G+KYPPSP +
Sbjct: 70 DPADDFDFSDAVLGYISQMLNEEDMDDKVCMLQESLDLEAAERSLYEAIGKKYPPSPERN 129
Query: 135 SPCSSRNSETLN 146
+ RNSE L+
Sbjct: 130 LAFAERNSENLD 141
>TAIR|locus:2025022 [details] [associations]
symbol:SCL14 "SCARECROW-like 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003700
GO:GO:0006351 GO:GO:0009410 EMBL:AC022464 InterPro:IPR005202
PROSITE:PS50985 HOGENOM:HOG000238576 EMBL:AF036309 IPI:IPI00525012
PIR:T51232 RefSeq:NP_172233.1 UniGene:At.21921 STRING:Q9XE58
PaxDb:Q9XE58 PRIDE:Q9XE58 EnsemblPlants:AT1G07530.1 GeneID:837267
KEGG:ath:AT1G07530 GeneFarm:4250 TAIR:At1g07530 eggNOG:NOG319005
OMA:HEDFVVD PhylomeDB:Q9XE58 Genevestigator:Q9XE58 Uniprot:Q9XE58
Length = 769
Score = 1324 (471.1 bits), Expect = 3.7e-135, P = 3.7e-135
Identities = 261/556 (46%), Positives = 370/556 (66%)
Query: 152 GSTSVNNLFEPNWMSNQ---G--DSSSSITQTN-LFNSPESVLVPNLFSTGSSFLLNDNT 205
G V+N+F+ + ++ Q G ++S + +++ LF +S + N +GS + +
Sbjct: 220 GDDLVSNMFKDDELAMQFKKGVEEASKFLPKSSQLFIDVDSYIPMN---SGSK---ENGS 273
Query: 206 AIINSTSDSAKSPEGEDRTYSSPYGS-RGRKXXXXXXXXXXXXGRSNKQSALSPPENEPL 264
+ T ++ +Y+ P G+K RSNKQSA+ E+E
Sbjct: 274 EVFVKTEKKDETEHHHHHSYAPPPNRLTGKKSHWRDEDEDFVEERSNKQSAVYVEESELS 333
Query: 265 EMYDEVVLCKCENNKSTVCLIHGYVQNGSSGKL--QQNGQPKGSSSATTRSRRKGKKSEV 322
EM+D++++C VC+++ S+ + Q NG +T+ S K E
Sbjct: 334 EMFDKILVC---GPGKPVCILNQNFPTESAKVVTAQSNGAKIRGKKSTSTSHSNDSKKET 390
Query: 323 VDLWTLLTLCAQAVANYDQRTANDFLKQIRQHSSPFGDGIQRLAHYFANGLEVRLAGTRT 382
DL TLL LCAQAV+ D+RTAN+ L+QIR+HSSP G+G +RLAHYFAN LE RLAGT T
Sbjct: 391 ADLRTLLVLCAQAVSVDDRRTANEMLRQIREHSSPLGNGSERLAHYFANSLEARLAGTGT 450
Query: 383 PVQTHLASSRASAAEVLQAYKVYVSSCPFNRMTFFMANRMILKLAEKATRLHIVDFGIGY 442
+ T L+S + SAA++L+AY+ Y+S CPF + AN +++ A +HI+DFGI Y
Sbjct: 451 QIYTALSSKKTSAADMLKAYQTYMSVCPFKKAAIIFANHSMMRFTANANTIHIIDFGISY 510
Query: 443 GFQWPCLIQRIS-KRPGGPPKIRMTAIEFPQPGFKPAERVEETGHRLKCYSQRFGVPFEY 501
GFQWP LI R+S RPGG PK+R+T IE PQ GF+PAE V+ETGHRL Y QR VPFEY
Sbjct: 511 GFQWPALIHRLSLSRPGGSPKLRITGIELPQRGFRPAEGVQETGHRLARYCQRHNVPFEY 570
Query: 502 NTIAQKWQNIQLEDLKIDREEMTVVNCLYRMRNLPDDTVVINSPRDAVLELIKKINPDIF 561
N IAQKW+ IQ+EDLK+ + E VVN L+R RNL D+TV++NSPRDAVL+LI+KINP++F
Sbjct: 571 NAIAQKWETIQVEDLKLRQGEYVVVNSLFRFRNLLDETVLVNSPRDAVLKLIRKINPNVF 630
Query: 562 IHGVVNGTYNAPFFLPRFREALFHFSTFFDMFESTVPREDQGRMIFEREIYGKDAMNVIA 621
I +++G YNAPFF+ RFREALFH+S FDM +S + RED+ R+++E+E YG++ +NV+A
Sbjct: 631 IPAILSGNYNAPFFVTRFREALFHYSAVFDMCDSKLAREDEMRLMYEKEFYGREIVNVVA 690
Query: 622 CEGIERVERPETYKQWQARNLRAGFKQLELDKDILKTIRTLVKSNFHPDFVIDEAGEWML 681
CEG ERVERPETYKQWQAR +RAGF+QL L+K++++ ++ +++ + +F +D+ G W+L
Sbjct: 691 CEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQNLKLKIENGYDKNFDVDQNGNWLL 750
Query: 682 QGWKGRLAYALSFWKP 697
QGWKGR+ YA S W P
Sbjct: 751 QGWKGRIVYASSLWVP 766
Score = 197 (74.4 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 72/236 (30%), Positives = 106/236 (44%)
Query: 1 MKTLVEEFSGSMKNPLQFDRG-SVSTYSNRNH--VDKFKLKQ-SREPIDPPLPPSASLQN 56
M + + F GSM + L F++ + SN+ + F L +DPP + N
Sbjct: 1 MGSYPDGFPGSM-DELDFNKDFDLPPSSNQTLGLANGFYLDDLDFSSLDPPEAYPSQNNN 59
Query: 57 NQNPPXXXXXXXXXXXYGDPADICELSNTTLKFISEILMEEDLEGKTCMLQDCLALQAAE 116
N N D AD S++ LK+IS++LMEED+E K CM D LALQAAE
Sbjct: 60 NNNINNKAVAGDLLSSSSDDADF---SDSVLKYISQVLMEEDMEEKPCMFHDALALQAAE 116
Query: 117 KSFYDVLGQKYPPSPNQISPCSSRN--SETLNDYCTSGSTSVNNLFEPNWMSNQGDSSSS 174
KS Y+ LG+KYP S + S S++ + C+ G+ S + + DS S
Sbjct: 117 KSLYEALGEKYPSSSSASSVDHPERLASDSPDGSCSGGAFSD---YASTTTTTSSDSHWS 173
Query: 175 ITQTNLFNSPESVLVPNLFSTGSSFLLNDNTAIINSTSDSAKSPEGEDRTYSSPYG 230
+ L N P + P S+F+ +T+ NS + G Y S +G
Sbjct: 174 VD--GLENRPSWLHTP----MPSNFVFQ-STSRSNSVTGGGGG--GNSAVYGSGFG 220
>TAIR|locus:2148293 [details] [associations]
symbol:AT5G59450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AB025604
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY035001 EMBL:AY062942
EMBL:AF036307 IPI:IPI00541926 PIR:T51233 RefSeq:NP_200753.1
UniGene:At.29225 UniGene:At.63919 UniGene:At.72775 STRING:Q9LTI5
EnsemblPlants:AT5G59450.1 GeneID:836064 KEGG:ath:AT5G59450
GeneFarm:4255 TAIR:At5g59450 eggNOG:NOG254902 HOGENOM:HOG000238576
InParanoid:Q9LTI5 OMA:KPATISK PhylomeDB:Q9LTI5
ProtClustDB:CLSN2685117 Genevestigator:Q9LTI5 Uniprot:Q9LTI5
Length = 610
Score = 1207 (429.9 bits), Expect = 7.5e-135, Sum P(2) = 7.5e-135
Identities = 234/454 (51%), Positives = 312/454 (68%)
Query: 249 RSNKQSALSPPENEPLEMYDEVVLCKCENNKSTVCLIHGYVQNGSSGKLQQNGQPKGSSS 308
R NKQ A+ E E L + E VL C+ N+ + + + G+ KGSS+
Sbjct: 156 RRNKQPAIFVSEMEELAVKLEHVLLVCKTNQEEEEERTVITKQSTPNRA---GRAKGSSN 212
Query: 309 ATTRSRRKGKKSEVVDLWTLLTLCAQAVANYDQRTANDFLKQIRQHSSPFGDGIQRLAHY 368
+ K K+ VDL +LLT CAQAVA++DQR A D LK+IR HSS GDG QRLA Y
Sbjct: 213 -----KSKTHKTNTVDLRSLLTQCAQAVASFDQRRATDKLKEIRAHSSSNGDGTQRLAFY 267
Query: 369 FANGLEVRLAGTRTP-VQTHLASSRASAAEVLQAYKVYVSSCPFNRMTFFMANRMILKLA 427
FA LE R+ G +P V SS S ++L+AYK++V +CP +F AN+ I +LA
Sbjct: 268 FAEALEARITGNISPPVSNPFPSSTTSMVDILKAYKLFVHTCPIYVTDYFAANKSIYELA 327
Query: 428 EKATRLHIVDFGIGYGFQWPCLIQRISKRPGGPPKIRMTAIEFPQPGFKPAERVEETGHR 487
KAT+LHIVDFG+ YGFQWPCL++ +SKRPGGPP +R+T IE PQ GF+P++RVEETG R
Sbjct: 328 MKATKLHIVDFGVLYGFQWPCLLRALSKRPGGPPMLRVTGIELPQAGFRPSDRVEETGRR 387
Query: 488 LKCYSQRFGVPFEYNTIAQKWQNIQLEDLKIDREEMTVVNCLYRMRNLPDDTVVINSPRD 547
LK + +F VPFE+N IA+KW+ I L++L I+ E TVVNC++R++ PD+TV ++SPRD
Sbjct: 388 LKRFCDQFNVPFEFNFIAKKWETITLDELMINPGETTVVNCIHRLQYTPDETVSLDSPRD 447
Query: 548 AVLELIKKINPDIFIHGVVNGTYNAPFFLPRFREALFHFSTFFDMFESTVPREDQ--GRM 605
VL+L + INPD+F+ +NG YN+PFF+ RFREALFH+S+ FDMF++T+ ED+ R
Sbjct: 448 TVLKLFRDINPDLFVFAEINGMYNSPFFMTRFREALFHYSSLFDMFDTTIHAEDEYKNRS 507
Query: 606 IFEREIYGKDAMNVIACEGIERVERPETYKQWQARNLRAGFKQLELDKDILKTIRTLVKS 665
+ ERE+ +DAM+VI+CEG ER RPETYKQW+ R LRAGFK + K I+K + +V+
Sbjct: 508 LLERELLVRDAMSVISCEGAERFARPETYKQWRVRILRAGFKPATISKQIMKEAKEIVRK 567
Query: 666 NFHPDFVIDEAGEWMLQGWKGRLAYALSFWKPVQ 699
+H DFVID WMLQGWKGR+ YA S WKP +
Sbjct: 568 RYHRDFVIDSDNNWMLQGWKGRVIYAFSCWKPAE 601
Score = 135 (52.6 bits), Expect = 7.5e-135, Sum P(2) = 7.5e-135
Identities = 36/108 (33%), Positives = 57/108 (52%)
Query: 50 PSASLQNNQNP-PXXXXXXXXXXXYGDPADICELSNTTLKFISEILM-EEDLEGKTCMLQ 107
P +L++ N P P +C ++ LK+I+++LM EED G + +
Sbjct: 24 PRNNLESGNNLFPDFHESQNQSSPNDSPPTVCLDNSPVLKYINDMLMDEEDFVG---ISR 80
Query: 108 DCLALQAAEKSFYDVLGQKYPPSPNQISPCSSRNSETLNDYCTSGSTS 155
D LALQAAE+SFY+++ Q+ P S S S +NS D+C +T+
Sbjct: 81 DDLALQAAERSFYEIIQQQSPESDQNTSSSSDQNSGD-QDFCFPSTTT 127
>TAIR|locus:2075155 [details] [associations]
symbol:AT3G46600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016671 "oxidoreductase
activity, acting on a sulfur group of donors, disulfide as
acceptor" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AL133314
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
ProtClustDB:CLSN2685117 EMBL:AK226419 EMBL:AY087418 IPI:IPI00537144
PIR:T45597 RefSeq:NP_190244.1 UniGene:At.595 STRING:Q9SNB8
EnsemblPlants:AT3G46600.1 GeneID:823813 KEGG:ath:AT3G46600
GeneFarm:4254 TAIR:At3g46600 eggNOG:NOG304481 InParanoid:Q9SNB8
OMA:FNESESQ PhylomeDB:Q9SNB8 Genevestigator:Q9SNB8 Uniprot:Q9SNB8
Length = 583
Score = 1165 (415.2 bits), Expect = 1.8e-131, Sum P(2) = 1.8e-131
Identities = 225/409 (55%), Positives = 291/409 (71%)
Query: 298 QQNGQPKGSSSAT-----TRSRRKGKKSEV-VDLWTLLTLCAQAVANYDQRTANDFLKQI 351
Q+N Q + + T + +R K +KS+ VD+ LL CAQAVA++DQR A + LK+I
Sbjct: 176 QKNDQGEATEKKTRHVKGSSNRYKQQKSDQPVDMRNLLMQCAQAVASFDQRRAFEKLKEI 235
Query: 352 RQHSSPFGDGIQRLAHYFANGLEVRLAGTRT-PVQTHLASSRASAAEVLQAYKVYVSSCP 410
R+HSS GD QRL ++FA LE R+ GT T P+ SSR S ++L+AYK +V +CP
Sbjct: 236 REHSSRHGDATQRLGYHFAEALEARITGTMTTPISA--TSSRTSMVDILKAYKGFVQACP 293
Query: 411 FNRMTFFMANRMILKLAEKATRLHIVDFGIGYGFQWPCLIQRISKRPGGPPKIRMTAIEF 470
M +F ANR I +LA KAT LHI+DFGI YGFQWPCLIQ +SKR GPP +R+T IE
Sbjct: 294 TLIMCYFTANRTINELASKATTLHIIDFGILYGFQWPCLIQALSKRDIGPPLLRVTGIEL 353
Query: 471 PQPGFKPAERVEETGHRLKCYSQRFGVPFEYNTIAQKWQNIQLEDLKIDREEMTVVNCLY 530
PQ GF+P+ERVEETG RLK + +F VPFEY+ IA+ W+NI L+DL I+ E TVVNC+
Sbjct: 354 PQSGFRPSERVEETGRRLKRFCDKFNVPFEYSFIAKNWENITLDDLVINSGETTVVNCIL 413
Query: 531 RMRNLPDDTVVINSPRDAVLELIKKINPDIFIHGVVNGTYNAPFFLPRFREALFHFSTFF 590
R++ PD+TV +NSPRD L+L + INPD+F+ +NGTYN+PFFL RFREALFH S+ F
Sbjct: 414 RLQYTPDETVSLNSPRDTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSLF 473
Query: 591 DMFESTVPREDQGRMIFEREIYGKDAMNVIACEGIERVERPETYKQWQARNLRAGFKQLE 650
DM+E+T+ +D R + ERE+ +DAM+VIACEG ER RPETYKQWQ R LRAGF+ +
Sbjct: 474 DMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPAK 533
Query: 651 LDKDILKTIRTLVKSNFHPDFVIDEAGEWMLQGWKGRLAYALSFWKPVQ 699
L K I+K + +VK +H DFVID WM QGWKGR+ YA+S WKP +
Sbjct: 534 LSKQIVKDGKEIVKERYHKDFVIDNDNHWMFQGWKGRVLYAVSCWKPAK 582
Score = 145 (56.1 bits), Expect = 1.8e-131, Sum P(2) = 1.8e-131
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 79 ICELSNTTLKFISEILMEEDLEGKTCMLQDCLALQAAEKSFYDVLGQKYPPS 130
+C K+I+++LMEEDLEG++CML+D LALQAAE+SF++VL + P S
Sbjct: 55 VCSDYLPVFKYINDMLMEEDLEGQSCMLEDSLALQAAERSFFEVLQDQTPIS 106
>TAIR|locus:2025032 [details] [associations]
symbol:AT1G07520 "AT1G07520" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0010200 EMBL:AC022464
InterPro:IPR005202 PROSITE:PS50985 PIR:T51232 eggNOG:NOG319005
EMBL:AB493440 EMBL:BX839686 IPI:IPI00525480 IPI:IPI01019456
RefSeq:NP_172232.1 UniGene:At.63938 UniGene:At.71785 STRING:Q3EDH0
PRIDE:Q3EDH0 GeneID:837266 KEGG:ath:AT1G07520 GeneFarm:4253
TAIR:At1g07520 InParanoid:Q3EDH0 OMA:VRIENEV Genevestigator:Q3EDH0
Uniprot:Q3EDH0
Length = 695
Score = 1167 (415.9 bits), Expect = 1.6e-118, P = 1.6e-118
Identities = 268/659 (40%), Positives = 388/659 (58%)
Query: 73 YGDPADICELSNTTLKFISEILMEEDLEGKTCMLQDCLALQAAEKSFYDVLGQKYPPS-- 130
+ PAD + NT LK+++++LMEE L K + D LAL+ E+ V+ S
Sbjct: 56 FSPPADEIDSENTLLKYVNQLLMEESLAEKQSIFYDSLALRQTEEMLQQVISDSQTQSSI 115
Query: 131 PNQ-ISPCSSRNSETLNDYCTSGSTSVN--N--LFEPNWMSNQG----DSSSSITQTNLF 181
PN I+ SS NS DY S ++SV N LF+ + + G S+ + F
Sbjct: 116 PNNSITTSSSSNS---GDYSNSSNSSVRIENEVLFDNKHLGDSGVVSFPGSNMLRGGEQF 172
Query: 182 NSPES-VLVPNLFSTGSS-------------FLLNDNTAIINSTSDSAKS-PEGEDRTYS 226
P + +LV ++FS S FL N + I N + + P + +S
Sbjct: 173 GQPANEILVRSMFSDAESVLQFKRGLEEASKFLPNTDQWIFNLEPEMERVVPVKVEEGWS 232
Query: 227 SPYGSR-GRKXXXXXXXXXXXXGRSNKQSALSPPENEPLEMYDEVVLCKCENNKSTVCLI 285
+ +R R +KQ A++ + + EM+D+V+L E C
Sbjct: 233 AISKTRKNHHEREEEEDDLEEARRRSKQFAVNEEDGKLTEMFDKVLLLDGE------C-- 284
Query: 286 HGYVQNGSSGKLQQNGQPKGSSSATTRSRRKGKKSEVVDLWTLLTLCAQAVANYDQRTAN 345
++ ++G+ GSS A + R KKS VD TLLTLCAQ+V+ D+ TA+
Sbjct: 285 --------DPQIIEDGE-NGSSKALVKKGRAKKKSRAVDFRTLLTLCAQSVSAGDKITAD 335
Query: 346 DFLKQIRQHSSPFGDGIQRLAHYFANGLEVRLAG-TRTPVQTH---LASSRASAAEVLQA 401
D L+QIR+ SP GD QRLAH+FAN LE RL G T T +Q++ ++S + +AA++L++
Sbjct: 336 DLLRQIRKQCSPVGDASQRLAHFFANALEARLEGSTGTMIQSYYDSISSKKRTAAQILKS 395
Query: 402 YKVYVSSCPFNRMTFFMANRMILKLAEKATRLHIVDFGIGYGFQWPCLIQRISKRPGGPP 461
Y V++S+ PF + +F +N+MIL A+ A+ LHIVDFGI YGFQWP IQ +SK G
Sbjct: 396 YSVFLSASPFMTLIYFFSNKMILDAAKDASVLHIVDFGILYGFQWPMFIQHLSKSNPGLR 455
Query: 462 KIRMTAIEFPQPGFKPAERVEETGHRLKCYSQRFGVPFEYNTIAQK-WQNIQLEDLKIDR 520
K+R+T IE PQ G +P ER+++TG RL Y +RFGVPFEYN IA K W+ I++E+ KI
Sbjct: 456 KLRITGIEIPQHGLRPTERIQDTGRRLTEYCKRFGVPFEYNAIASKNWETIKMEEFKIRP 515
Query: 521 EEMTVVNCLYRMRNLPDDTV-VINSPRDAVLELIKKINPDIFIHGVVNGTYNAPFFLPRF 579
E+ VN + R +NL D + PRD L+LI+ +NP++F+ VNG++NAPFF RF
Sbjct: 516 NEVLAVNAVLRFKNLRDVIPGEEDCPRDGFLKLIRDMNPNVFLSSTVNGSFNAPFFTTRF 575
Query: 580 REALFHFSTFFDMFESTVPREDQGRMIFEREIYGKDAMNVIACEGIERVERPETYKQWQA 639
+EALFH+S FD+F +T+ +E+ R+ FE E YG++ MNVIACEG++RVERPETYKQWQ
Sbjct: 576 KEALFHYSALFDLFGATLSKENPERIHFEGEFYGREVMNVIACEGVDRVERPETYKQWQV 635
Query: 640 RNLRAGFKQLELDKDILKTIRTLVKS-NFHPDFVIDEAGEWMLQGWKGRLAYALSFWKP 697
R +RAGFKQ ++ ++++ R +K +H DFV+DE W LQGWKGR+ ++ S W P
Sbjct: 636 RMIRAGFKQKPVEAELVQLFREKMKKWGYHKDFVLDEDSNWFLQGWKGRILFSSSCWVP 694
>TAIR|locus:2008076 [details] [associations]
symbol:SCL5 "AT1G50600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC079279 EMBL:AC012561
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG287245 EMBL:AY034929 EMBL:AY039611 EMBL:BT000883
EMBL:AF036302 IPI:IPI00519165 PIR:E96542 PIR:T51236
RefSeq:NP_175475.2 UniGene:At.14827 STRING:Q8H125 PaxDb:Q8H125
PRIDE:Q8H125 EnsemblPlants:AT1G50600.1 GeneID:841482
KEGG:ath:AT1G50600 GeneFarm:4229 TAIR:At1g50600 InParanoid:Q8H125
OMA:REERHEP PhylomeDB:Q8H125 ProtClustDB:CLSN2918355
ArrayExpress:Q8H125 Genevestigator:Q8H125 Uniprot:Q8H125
Length = 597
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 160/572 (27%), Positives = 267/572 (46%)
Query: 138 SSRNSETLNDYCTSGSTSVNNLFEPNWMSNQGDSSSSITQ-TNLF-NSPESVLVPNLFST 195
S R S+T + C S N ++P+ + + I + +++F + P SV +L +
Sbjct: 48 SQRISQTQSPICLSA-----NYYQPDNLDMEATQKHMIQEGSSMFYHQPSSVKQMDL--S 100
Query: 196 GSSFLLNDNTAIINSTSDSAKSPEGEDRTYSSPYGSRGRKXXXXXXXXXXXXGRSNKQSA 255
+F D+ + S+S + P ++ SS S R N S
Sbjct: 101 VQTF---DSYCTLESSSGTKSHPCLNNKNNSSSTTSFSSNESPISQANNNNLSRFNNHSP 157
Query: 256 LSPPENEPLE-----MYDEVVLCKCENNKSTVCLI----HGYVQNGSSGKLQQNGQPKGS 306
N PL +E L + T + + Y G G QQ+G
Sbjct: 158 -EENNNSPLSGSSATNTNETELSLMLKDLETAMMEPDVDNSYNNQGGFG--QQHGVV--- 211
Query: 307 SSATTRSRRKGKKSEVVDLWTLLTLCAQAVANYDQRTANDFLKQIRQHSSPFGDGIQRLA 366
SSA RS + DL +L CA+AV NYD + + Q++Q S G+ +QRL
Sbjct: 212 SSAMYRSMEMISRG---DLKGVLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLG 268
Query: 367 HYFANGLEVRLAGTRTPVQTHLASSRASAAEVLQAYKVYVSSCPFNRMTFFMANRMILKL 426
Y GL RLA + + + L + E+L + +CP+ + + AN I +
Sbjct: 269 AYMLEGLVARLASSGSSIYKALRCKDPTGPELLTYMHILYEACPYFKFGYESANGAIAEA 328
Query: 427 AEKATRLHIVDFGIGYGFQWPCLIQRISKRPGGPPKIRMTAIEFPQPGFKPAERVEETGH 486
+ + +HI+DF I G QW LI+ + RPGGPP +R+T I+ P+ F +E G
Sbjct: 329 VKNESFVHIIDFQISQGGQWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQ 388
Query: 487 RLKCYSQRFGVPFEYNTIAQKWQNIQLEDLKIDREEMTVVNCLYRMRNLPDDTVVINSPR 546
RL ++ GVPFE++ A +++E L + E VN + ++PD++V + + R
Sbjct: 389 RLGKLAEMCGVPFEFHGAALCCTEVEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHR 448
Query: 547 DAVLELIKKINPDI--FIHGVVNGTYNAPFFLPRFREALFHFSTFFDMFESTVPREDQGR 604
D +L L+K ++P++ + N T APF LPRF E + H+ F+ + + R+ + R
Sbjct: 449 DRLLRLVKHLSPNVVTLVEQEAN-TNTAPF-LPRFVETMNHYLAVFESIDVKLARDHKER 506
Query: 605 MIFEREIYGKDAMNVIACEGIERVERPETYKQWQARNLRAGFKQLELDKDILKTIRTLVK 664
+ E+ ++ +N+IACEG+ER ER E +W++R AGFK L + TI+ L++
Sbjct: 507 INVEQHCLAREVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLE 566
Query: 665 SNFHPDFVIDEAGEWMLQGWKGRLAYALSFWK 696
S + + ++E + GWK + W+
Sbjct: 567 S-YSEKYTLEERDGALYLGWKNQPLITSCAWR 597
>TAIR|locus:2164783 [details] [associations]
symbol:PAT1 "AT5G48150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] Pfam:PF03514 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0009640
GO:GO:0004871 EMBL:AB023039 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF153443 EMBL:BT025326 EMBL:AK117483
IPI:IPI00517897 RefSeq:NP_199626.1 RefSeq:NP_974903.1
UniGene:At.7076 PRIDE:Q9LDL7 EnsemblPlants:AT5G48150.1
EnsemblPlants:AT5G48150.2 GeneID:834867 KEGG:ath:AT5G48150
GeneFarm:4233 TAIR:At5g48150 eggNOG:NOG287245 InParanoid:Q9LDL7
OMA:NSAHARG PhylomeDB:Q9LDL7 ProtClustDB:CLSN2686580
Genevestigator:Q9LDL7 Uniprot:Q9LDL7
Length = 490
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 114/374 (30%), Positives = 199/374 (53%)
Query: 324 DLWTLLTLCAQAVANYDQRTANDFLKQIRQHSSPFGDGIQRLAHYFANGLEVRLAGTRTP 383
DL L CA+A++ D A+ ++++RQ S G+ IQRL Y GL +LA + +
Sbjct: 118 DLRADLVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSS 177
Query: 384 VQTHL-ASSRASAAEVLQAYKVYVSSCPFNRMTFFMANRMILKLAEKATRLHIVDFGIGY 442
+ L ++ E+L + CP+ + + AN I + ++ R+HI+DF IG
Sbjct: 178 IYKALNRCPEPASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQ 237
Query: 443 GFQWPCLIQRISKRPGGPPKIRMTAIEFPQPGFKPAERVEETGHRLKCYSQRFGVPFEYN 502
G QW LIQ + RPGGPP+IR+T I+ + + G+RL +++F VPFE+N
Sbjct: 238 GSQWVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFN 297
Query: 503 TIAQKWQNIQLEDLKIDREEMTVVNCLYRMRNLPDDTVVINSPRDAVLELIKKINPDIFI 562
+++ ++ ++L + E VN + + ++PD++V + RD +L ++K ++P +
Sbjct: 298 SVSVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVT 357
Query: 563 HGVVNGTYNAPFFLPRFREALFHFSTFFDMFESTVPREDQGRMIFEREIYGKDAMNVIAC 622
N F PRF E + +++ F+ + T+PR+ + R+ E+ +D +N+IAC
Sbjct: 358 LVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIAC 417
Query: 623 EGIERVERPETYKQWQARNLRAGFKQLELDKDILKTIRTLVKSNFHPDFVIDEAGEWMLQ 682
EG +RVER E +W++R AGF L + TI++L++ N+ + ++E +
Sbjct: 418 EGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLR-NYSDKYRLEERDGALYL 476
Query: 683 GWKGRLAYALSFWK 696
GW R A WK
Sbjct: 477 GWMHRDLVASCAWK 490
>TAIR|locus:2026982 [details] [associations]
symbol:SCL1 "AT1G21450" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
EMBL:AC015447 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF210731 EMBL:AY045833 EMBL:AY096626
EMBL:AY084492 EMBL:AF036300 IPI:IPI00538394 PIR:E86347 PIR:T51234
RefSeq:NP_173566.1 UniGene:At.14825 ProteinModelPortal:Q9SDQ3
STRING:Q9SDQ3 PaxDb:Q9SDQ3 PRIDE:Q9SDQ3 EnsemblPlants:AT1G21450.1
GeneID:838743 KEGG:ath:AT1G21450 GeneFarm:4232 TAIR:At1g21450
eggNOG:NOG324880 InParanoid:Q9SDQ3 OMA:SINDEWA PhylomeDB:Q9SDQ3
ProtClustDB:CLSN2913658 Genevestigator:Q9SDQ3 Uniprot:Q9SDQ3
Length = 593
Score = 513 (185.6 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 128/405 (31%), Positives = 206/405 (50%)
Query: 298 QQNGQPKGSSSATTRSRRKGKKSEVVDLWT---LLTLCAQAVANYDQRTANDFLKQIRQH 354
Q PK SSSA + S K EVV T +L CA+A++ A + ++RQ
Sbjct: 194 QHQDSPKESSSADSNSHVSSK--EVVSQATPKQILISCARALSEGKLEEALSMVNELRQI 251
Query: 355 SSPFGDGIQRLAHYFANGLEVRLAGTRTPVQTHLASSRASAAEVLQAYKVYVSSCPFNRM 414
S GD QR+A Y GL R+A + + L + E L A +V CP +
Sbjct: 252 VSIQGDPSQRIAAYMVEGLAARMAASGKFIYRALKCKEPPSDERLAAMQVLFEVCPCFKF 311
Query: 415 TFFMANRMILKLAEKATRLHIVDFGIGYGFQWPCLIQRISKRPGGPPKIRMTAIEFPQPG 474
F AN IL+ + +HI+DF I G Q+ LI+ I++ PG P++R+T I+ P+
Sbjct: 312 GFLAANGAILEAIKGEEEVHIIDFDINQGNQYMTLIRSIAELPGKRPRLRLTGIDDPESV 371
Query: 475 FKPAERVEETGHRLKCYSQRFGVPFEYNTIAQKWQNIQLEDLKIDREEMTVVNCLYRMRN 534
+ + G RL+ ++ GV F++ + K + L E +VN +++ +
Sbjct: 372 QRSIGGLRIIGLRLEQLAEDNGVSFKFKAMPSKTSIVSPSTLGCKPGETLIVNFAFQLHH 431
Query: 535 LPDDTVVINSPRDAVLELIKKINPDIF--IHGVVNGTYNAPFFLPRFREALFHFSTFFDM 592
+PD++V + RD +L ++K +NP + + VN T +PFF PRF EA ++S F+
Sbjct: 432 MPDESVTTVNQRDELLHMVKSLNPKLVTVVEQDVN-TNTSPFF-PRFIEAYEYYSAVFES 489
Query: 593 FESTVPREDQGRMIFEREIYGKDAMNVIACEGIERVERPETYKQWQARNLRAGFKQLELD 652
+ T+PRE Q RM ER+ +D +N++ACEG ER+ER E +W+AR + AGF +
Sbjct: 490 LDMTLPRESQERMNVERQCLARDIVNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMS 549
Query: 653 KDILKTIRTLVKSNFHPDFVI-DEAGEWMLQGWKGRLAYALSFWK 696
+ I+ L+K + + + +E GE W+ + S W+
Sbjct: 550 AKVTNNIQNLIKQQYCNKYKLKEEMGELHFC-WEEKSLIVASAWR 593
Score = 38 (18.4 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 94 LMEEDLEGKTCMLQDCLALQAAEKSFYD 121
+ + D C+ D Q+ EK F D
Sbjct: 49 IFDPDRSKNPCLTDDSYPSQSYEKYFLD 76
>TAIR|locus:2044973 [details] [associations]
symbol:SCL21 "AT2G04890" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006955 EMBL:AC007211
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:AF210732 EMBL:AK175210 EMBL:AK175990 EMBL:AK176099
EMBL:AK221099 EMBL:BT026455 IPI:IPI00534889 PIR:G84462
RefSeq:NP_178566.1 UniGene:At.48419 UniGene:At.71110 IntAct:Q9S7H5
EnsemblPlants:AT2G04890.1 GeneID:815036 KEGG:ath:AT2G04890
GeneFarm:4231 TAIR:At2g04890 eggNOG:NOG292869 InParanoid:Q9S7H5
OMA:HKERINI PhylomeDB:Q9S7H5 ProtClustDB:CLSN2912915
Genevestigator:Q9S7H5 Uniprot:Q9S7H5
Length = 413
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 120/375 (32%), Positives = 195/375 (52%)
Query: 324 DLWTLLTLCAQAVANYDQRTANDFLKQIRQHSSPFGDGIQRLAHYFANGLEVRLAGTRTP 383
DL +L CA+AV+ + A + ++R S G+ IQRL Y GL RLA + +
Sbjct: 49 DLKLVLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSS 108
Query: 384 VQTHLASSRASAAEVLQAYKVYVSSCPFNRMTFFMANRMILKLAEKATRLHIVDFGIGYG 443
+ L S + E L V CP+ + + AN I + + R+HI+DF IG G
Sbjct: 109 IYKSLQSREPESYEFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQG 168
Query: 444 FQWPCLIQRISKRPGGPPKIRMTAIEFPQPGFKPAERVEETGHRLKCYSQRFGVPFEYNT 503
QW LIQ + RPGG P IR+T G + RL+ +++F VPF +N
Sbjct: 169 SQWIALIQAFAARPGGAPNIRIT-------GVGDGSVLVTVKKRLEKLAKKFDVPFRFNA 221
Query: 504 IAQKWQNIQLEDLKIDREEMTVVNCLYRMRNLPDDTVVINSPRDAVLELIKKINPDI--F 561
+++ +++E+L + E VN Y + +LPD++V + + RD +L ++K ++P +
Sbjct: 222 VSRPSCEVEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKVVTL 281
Query: 562 IHGVVNGTYNAPFFLPRFREALFHFSTFFDMFESTVPREDQGRMIFEREIYGKDAMNVIA 621
+ N T +PF LPRF E L +++ F+ + +PR + R+ E+ +D +N+IA
Sbjct: 282 VEQECN-TNTSPF-LPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIA 339
Query: 622 CEGIERVERPETYKQWQARNLRAGFKQLELDKDILKTIRTLVKSNFHPDFVIDEAGEWML 681
CEG ER+ER E +W++R AGF+ L I TIR L++ ++ + I+E +
Sbjct: 340 CEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLR-DYSNGYAIEERDGALY 398
Query: 682 QGWKGRLAYALSFWK 696
GW R+ + WK
Sbjct: 399 LGWMDRILVSSCAWK 413
>TAIR|locus:2099624 [details] [associations]
symbol:RGL2 "RGA-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0010187 "negative regulation of seed
germination" evidence=IMP] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:2000377 "regulation of reactive oxygen species metabolic
process" evidence=IGI] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] Pfam:PF03514 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154 GO:GO:0006952
GO:GO:0009723 GO:GO:0003700 GO:GO:0006351 GO:GO:0010187
GO:GO:0009908 GO:GO:0042538 EMBL:AC009895 GO:GO:2000377
GO:GO:0040029 GO:GO:0009867 GO:GO:0009863 GO:GO:0009740
eggNOG:NOG243696 HOGENOM:HOG000238577 KO:K14494 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AK118009 IPI:IPI00521981 RefSeq:NP_186995.1
UniGene:At.18489 UniGene:At.67027 ProteinModelPortal:Q8GXW1
SMR:Q8GXW1 IntAct:Q8GXW1 STRING:Q8GXW1 EnsemblPlants:AT3G03450.1
GeneID:821251 KEGG:ath:AT3G03450 GeneFarm:4240 TAIR:At3g03450
InParanoid:Q8GXW1 OMA:MLSELNN PhylomeDB:Q8GXW1
ProtClustDB:CLSN2684085 Genevestigator:Q8GXW1 GermOnline:AT3G03450
Uniprot:Q8GXW1
Length = 547
Score = 463 (168.0 bits), Expect = 9.4e-44, P = 9.4e-44
Identities = 121/396 (30%), Positives = 195/396 (49%)
Query: 306 SSSATTRSRRKGKKSEV-VDLWTLLTLCAQAVANYDQRTANDFLKQIRQHSSPFGDGIQR 364
SS +TRS E V L L CA+A+ + A+ +K++ + + +
Sbjct: 160 SSDESTRSVVLVDSQETGVRLVHALVACAEAIHQENLNLADALVKRVGTLAGSQAGAMGK 219
Query: 365 LAHYFANGLEVRLAGTRTPVQTHLASSRASAAEVLQAYKVYVSSCPFNRMTFFMANRMIL 424
+A YFA L R+ T A+ S EVL+ + + SCP+ + F AN+ IL
Sbjct: 220 VATYFAQALARRIYRDYTAETDVCAAVNPSFEEVLEMH--FYESCPYLKFAHFTANQAIL 277
Query: 425 KLAEKATRLHIVDFGIGYGFQWPCLIQRISKRPGGPPKIRMTAIEFPQPGFKPAERVEET 484
+ A R+H++D G+ G QWP L+Q ++ RPGGPP R+T I PQ + ++ +++
Sbjct: 278 EAVTTARRVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGIGPPQT--ENSDSLQQL 335
Query: 485 GHRLKCYSQRFGVPFEYNTIA-QKWQNIQLEDLKIDREEMT-VVNCLYRMRNLPDDTVVI 542
G +L ++Q GV FE+ +A + +++ E + E T VVN ++ + L +
Sbjct: 336 GWKLAQFAQNMGVEFEFKGLAAESLSDLEPEMFETRPESETLVVNSVFELHRL----LAR 391
Query: 543 NSPRDAVLELIKKINPDIFIHGVVNGTYNAPFFLPRFREALFHFSTFFDMFESTVPREDQ 602
+ + +L +K I P I +N FL RF EAL ++S+ FD E + Q
Sbjct: 392 SGSIEKLLNTVKAIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQ 451
Query: 603 GRMIFEREIY-GKDAMNVIACEGIERVERPETYKQWQARNLRAGFKQLELDKDILKTIRT 661
R++ E+Y G+ +NV+A EG +RVER ET QW+ R AGF + L K
Sbjct: 452 DRVM--SEVYLGRQILNVVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASM 509
Query: 662 LVKSNFHPD-FVIDEAGEWMLQGWKGRLAYALSFWK 696
L+ D + ++E ++ GW+ R S WK
Sbjct: 510 LLSLYATGDGYRVEENDGCLMIGWQTRPLITTSAWK 545
>TAIR|locus:2006747 [details] [associations]
symbol:GAI "GIBBERELLIC ACID INSENSITIVE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA;TAS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010233 "phloem transport"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IGI]
[GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0010187 "negative regulation of seed germination" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0006808 "regulation of nitrogen utilization"
evidence=IMP] Pfam:PF03514 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0010218 GO:GO:0010187
GO:GO:0006808 GO:GO:0042538 GO:GO:2000377 EMBL:AC006917
GO:GO:0010233 GO:GO:0040029 GO:GO:0009867 GO:GO:0009863
GO:GO:0009740 EMBL:Y11337 EMBL:Y15193 EMBL:AY058194 EMBL:AY142002
IPI:IPI00535232 PIR:H86282 RefSeq:NP_172945.1 UniGene:At.15032
UniGene:At.75604 PDB:2ZSH PDB:2ZSI PDBsum:2ZSH PDBsum:2ZSI
ProteinModelPortal:Q9LQT8 SMR:Q9LQT8 DIP:DIP-32985N IntAct:Q9LQT8
STRING:Q9LQT8 EnsemblPlants:AT1G14920.1 GeneID:838057
KEGG:ath:AT1G14920 GeneFarm:4235 TAIR:At1g14920 eggNOG:NOG243696
HOGENOM:HOG000238577 InParanoid:Q9LQT8 KO:K14494 OMA:RRVYRFR
PhylomeDB:Q9LQT8 ProtClustDB:CLSN2682993 EvolutionaryTrace:Q9LQT8
Genevestigator:Q9LQT8 GermOnline:AT1G14920 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 Uniprot:Q9LQT8
Length = 533
Score = 441 (160.3 bits), Expect = 3.2e-41, P = 3.2e-41
Identities = 128/406 (31%), Positives = 202/406 (49%)
Query: 306 SSSATTRSRRK----GKKSEVVDLWTLLTLCAQAVANYDQRTANDFLKQIRQHS-SPFGD 360
+++AT S R + V L L CA+AV + A +KQI + S G
Sbjct: 146 TTTATAESTRHVVLVDSQENGVRLVHALLACAEAVQKENLTVAEALVKQIGFLAVSQIG- 204
Query: 361 GIQRLAHYFANGLE---VRLAGTRTPVQTHLASSRASAAEVLQAYKVYVSSCPFNRMTFF 417
++++A YFA L RL+ +++P+ H S ++ LQ + + +CP+ + F
Sbjct: 205 AMRKVATYFAEALARRIYRLSPSQSPID-H------SLSDTLQMH--FYETCPYLKFAHF 255
Query: 418 MANRMILKLAEKATRLHIVDFGIGYGFQWPCLIQRISKRPGGPPKIRMTAIEFPQPGFKP 477
AN+ IL+ + R+H++DF + G QWP L+Q ++ RPGGPP R+T I P P
Sbjct: 256 TANQAILEAFQGKKRVHVIDFSMSQGLQWPALMQALALRPGGPPVFRLTGIGPPAPD--N 313
Query: 478 AERVEETGHRLKCYSQRFGVPFEY-----NTIAQKWQNIQLEDLKIDREEMTVVNCLYRM 532
+ + E G +L ++ V FEY NT+A + + +L+ E VN ++ +
Sbjct: 314 FDYLHEVGCKLAHLAEAIHVEFEYRGFVANTLADL--DASMLELRPSEIESVAVNSVFEL 371
Query: 533 RNLPDDTVVINSPRDAVLELIKKINPDIFIHGVVNGTYNAPFFLPRFREALFHFSTFFDM 592
L I D VL ++ +I P+IF +N+P FL RF E+L ++ST FD
Sbjct: 372 HKLLGRPGAI----DKVLGVVNQIKPEIFTVVEQESNHNSPIFLDRFTESLHYYSTLFDS 427
Query: 593 FESTVPREDQGRMIFEREIY-GKDAMNVIACEGIERVERPETYKQWQARNLRAGFKQLEL 651
E VP Q +++ E+Y GK NV+AC+G +RVER ET QW+ R AGF +
Sbjct: 428 LEG-VP-SGQDKVM--SEVYLGKQICNVVACDGPDRVERHETLSQWRNRFGSAGFAAAHI 483
Query: 652 DKDILKTIRTLVKS-NFHPDFVIDEAGEWMLQGWKGRLAYALSFWK 696
+ K L+ N + ++E+ ++ GW R A S WK
Sbjct: 484 GSNAFKQASMLLALFNGGEGYRVEESDGCLMLGWHTRPLIATSAWK 529
>TAIR|locus:2201557 [details] [associations]
symbol:RGL1 "RGA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IGI;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0005634 GO:GO:0030154 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0009908 GO:GO:0042538
GO:GO:2000377 EMBL:AC020665 GO:GO:0040029 GO:GO:0009867
GO:GO:0009863 GO:GO:0009740 HOGENOM:HOG000238577 KO:K14494
GO:GO:0009938 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AJ224957 EMBL:AY048749 EMBL:AY070035
EMBL:AY096506 IPI:IPI00518407 PIR:G96688 RefSeq:NP_176809.1
UniGene:At.26400 UniGene:At.75607 ProteinModelPortal:Q9C8Y3
SMR:Q9C8Y3 IntAct:Q9C8Y3 STRING:Q9C8Y3 EnsemblPlants:AT1G66350.1
GeneID:842953 KEGG:ath:AT1G66350 GeneFarm:4239 TAIR:At1g66350
eggNOG:NOG314007 InParanoid:Q9C8Y3 OMA:TSAWRIN PhylomeDB:Q9C8Y3
ProtClustDB:CLSN2914366 Genevestigator:Q9C8Y3 GermOnline:AT1G66350
Uniprot:Q9C8Y3
Length = 511
Score = 436 (158.5 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 123/395 (31%), Positives = 195/395 (49%)
Query: 306 SSSATTRSRRKGKKSEV-VDLWTLLTLCAQAVANYDQRTANDFLKQIRQHSSPFGDGIQR 364
S ++TRS E V L L CA+AV + + A+ +K + +S +++
Sbjct: 132 SELSSTRSVVVLDSQETGVRLVHALLACAEAVQQNNLKLADALVKHVGLLASSQAGAMRK 191
Query: 365 LAHYFANGLEVRLAGTRTPVQTHLASSRASAAEVLQAYKVYVSSCPFNRMTFFMANRMIL 424
+A YFA GL R+ R + +A S S ++ LQ + + SCP+ + F AN+ IL
Sbjct: 192 VATYFAEGLARRIY--RIYPRDDVALS--SFSDTLQIH--FYESCPYLKFAHFTANQAIL 245
Query: 425 KLAEKATRLHIVDFGIGYGFQWPCLIQRISKRPGGPPKIRMTAIEFPQPGFKPAERVEET 484
++ A ++H++D G+ +G QWP LIQ ++ RP GPP R+T I G+ + ++E
Sbjct: 246 EVFATAEKVHVIDLGLNHGLQWPALIQALALRPNGPPDFRLTGI-----GYSLTD-IQEV 299
Query: 485 GHRLKCYSQRFGVPFEYNTIA-QKWQNIQLEDLKIDRE-EMTVVNCLYRMRNLPDDTVVI 542
G +L + GV FE+ +IA +++ E L I E VN ++ + L I
Sbjct: 300 GWKLGQLASTIGVNFEFKSIALNNLSDLKPEMLDIRPGLESVAVNSVFELHRLLAHPGSI 359
Query: 543 NSPRDAVLELIKKINPDIFIHGVVNGTYNAPFFLPRFREALFHFSTFFDMFESTVPREDQ 602
D L IK I PDI +N FL RF E+L ++S+ FD E P +D+
Sbjct: 360 ----DKFLSTIKSIRPDIMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLEGP-PSQDR 414
Query: 603 GRMIFEREIYGKDAMNVIACEGIERVERPETYKQWQARNLRAGFKQLELDKDILKTIRTL 662
+ G+ +N++ACEG +RVER ET QW+ R GFK + + + K L
Sbjct: 415 ---VMSELFLGRQILNLVACEGEDRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASML 471
Query: 663 VKSNFHPD-FVIDEAGEWMLQGWKGRLAYALSFWK 696
+ D + ++E +L GW+ R A S W+
Sbjct: 472 LALYAGADGYNVEENEGCLLLGWQTRPLIATSAWR 506
>TAIR|locus:2174974 [details] [associations]
symbol:AT5G66770 "AT5G66770" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB010700
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY062538 EMBL:BT002580
IPI:IPI00537848 RefSeq:NP_201478.1 UniGene:At.27307
ProteinModelPortal:Q9FL03 IntAct:Q9FL03 PRIDE:Q9FL03
EnsemblPlants:AT5G66770.1 GeneID:836810 KEGG:ath:AT5G66770
GeneFarm:4249 TAIR:At5g66770 eggNOG:NOG324692 HOGENOM:HOG000240374
InParanoid:Q9FL03 OMA:DASCSAP PhylomeDB:Q9FL03
ProtClustDB:CLSN2684429 Genevestigator:Q9FL03 Uniprot:Q9FL03
Length = 584
Score = 435 (158.2 bits), Expect = 1.5e-40, P = 1.5e-40
Identities = 111/370 (30%), Positives = 187/370 (50%)
Query: 332 CAQAVANYDQRTANDFLKQIRQHSSPFGDGIQRLAHYFANGLEVRLAGTRTPVQTHLASS 391
CA+ +++ D A+ L QIR+ S GD +R+A YF L RL+ P +SS
Sbjct: 224 CAR-ISDSDPNEASKTLLQIRESVSELGDPTERVAFYFTEALSNRLS----PNSPATSSS 278
Query: 392 RASAAEVLQAYKVYVSSCPFNRMTFFMANRMILKLAEKATRLHIVDFGIGYGFQWPCLIQ 451
+S +++ +YK +CP+++ AN+ IL+ EK+ ++HIVDFGI G QWP L+Q
Sbjct: 279 SSSTEDLILSYKTLNDACPYSKFAHLTANQAILEATEKSNKIHIVDFGIVQGIQWPALLQ 338
Query: 452 RISKRPGGPP-KIRMTAIEFPQPGFKPAERVEETGHRLKCYSQRFGVPFEYNTIAQKWQN 510
++ R G P +IR++ I P G P + TG+RL+ +++ + F++ I
Sbjct: 339 ALATRTSGKPTQIRVSGIPAPSLGESPEPSLIATGNRLRDFAKVLDLNFDFIPILTPIHL 398
Query: 511 IQLEDLKIDREEMTVVNCLYRMRNLPDDTVVINSPRDAVLELIKKINPDIFIHGVVNGTY 570
+ ++D +E+ VN + ++ L D+T I D L L K +NP + G +
Sbjct: 399 LNGSSFRVDPDEVLAVNFMLQLYKLLDETPTIV---DTALRLAKSLNPRVVTLGEYEVSL 455
Query: 571 NAPFFLPRFREALFHFSTFFDMFESTVPREDQGRMIFEREIYGKDAMNVIACE--GIERV 628
N F R + AL +S F+ E + R+ + R+ ERE++G+ +I E GI R
Sbjct: 456 NRVGFANRVKNALQFYSAVFESLEPNLGRDSEERVRVERELFGRRISGLIGPEKTGIHR- 514
Query: 629 ERPETYKQWQARNLRAGFKQLELDKDILKTIRTLVKS-NFHPDFVIDEAGEWMLQ-GWKG 686
ER E +QW+ AGF+ ++L + + L+ + N+ + I E+ + W
Sbjct: 515 ERMEEKEQWRVLMENAGFESVKLSNYAVSQAKILLWNYNYSNLYSIVESKPGFISLAWND 574
Query: 687 RLAYALSFWK 696
LS W+
Sbjct: 575 LPLLTLSSWR 584
>TAIR|locus:2080345 [details] [associations]
symbol:SCR "SCARECROW" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009956 "radial pattern formation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0008356 "asymmetric cell division"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009630 GO:GO:0008356 GO:GO:0051457 EMBL:AL132957
GO:GO:0010103 GO:GO:0009956 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:U62798 EMBL:AY056315 EMBL:AY080840
EMBL:AY113991 IPI:IPI00524888 PIR:T47581 PIR:T51244
RefSeq:NP_190990.1 UniGene:At.71814 UniGene:At.932 IntAct:Q9M384
STRING:Q9M384 EnsemblPlants:AT3G54220.1 GeneID:824589
KEGG:ath:AT3G54220 GeneFarm:4242 TAIR:At3g54220 eggNOG:NOG311437
InParanoid:Q9M384 OMA:QERENSS PhylomeDB:Q9M384
ProtClustDB:CLSN2915643 Genevestigator:Q9M384 Uniprot:Q9M384
Length = 653
Score = 435 (158.2 bits), Expect = 8.0e-39, Sum P(2) = 8.0e-39
Identities = 119/390 (30%), Positives = 198/390 (50%)
Query: 314 RRKGKKSEVVDLWTLLTLCAQAVANYDQRTANDFLKQIRQHSSPFGDGIQRLAHYFANGL 373
+R+ + E + L TLL CA+AV+ + AN L +I Q S+P+G QR+A YF+ +
Sbjct: 279 KRQKQDEEGLHLLTLLLQCAEAVSADNLEEANKLLLEISQLSTPYGTSAQRVAAYFSEAM 338
Query: 374 EVRLAGTRTPVQTHLASS---RASAAEVLQAYKVYVSSCPFNRMTFFMANRMILKLAEKA 430
RL + + L S + + +++ A++V+ P + + F AN+ I + EK
Sbjct: 339 SARLLNSCLGIYAALPSRWMPQTHSLKMVSAFQVFNGISPLVKFSHFTANQAIQEAFEKE 398
Query: 431 TRLHIVDFGIGYGFQWPCLIQRISKRPGGPPKIRMTAIEFPQPGFKPAERVEETGHRLKC 490
+HI+D I G QWP L ++ RPGGPP +R+T + G E ++ TG RL
Sbjct: 399 DSVHIIDLDIMQGLQWPGLFHILASRPGGPPHVRLTGL-----GTS-MEALQATGKRLSD 452
Query: 491 YSQRFGVPFEYNTIAQKWQNIQLEDLKIDREEMTVVNCLYRMRNLPDDTVVINSPRDA-V 549
++ + G+PFE+ +A+K N+ E L + + E V+ L +L D V S DA
Sbjct: 453 FADKLGLPFEFCPLAEKVGNLDTERLNVRKREAVAVHWL--QHSLYD---VTGS--DAHT 505
Query: 550 LELIKKINPDIFIHGVVNGTYNAPFFLPRFREALFHFSTFFDMFESTVPREDQGRMIFER 609
L L++++ P + + V +A FL RF EA+ ++S FD ++ E + R + E+
Sbjct: 506 LWLLQRLAPKV-VTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQ 564
Query: 610 EIYGKDAMNVIACEGIERVERPETYKQWQARNLRAGFKQLELDKDILKTIRTLVKSNFHP 669
++ K+ NV+A G R + ++ W+ + + GFK + L + T TL+ F
Sbjct: 565 QLLSKEIRNVLAVGGPSRSGEVK-FESWREKMQQCGFKGISLAGNAA-TQATLLLGMFPS 622
Query: 670 D--FVIDEAGEWMLQGWKGRLAYALSFWKP 697
D ++D+ G L GWK S W P
Sbjct: 623 DGYTLVDDNGTLKL-GWKDLSLLTASAWTP 651
Score = 38 (18.4 bits), Expect = 8.0e-39, Sum P(2) = 8.0e-39
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 43 PIDPP-LPPSASLQNNQNPP 61
P PP L +A++ + NPP
Sbjct: 81 PQQPPSLTAAATVSSQPNPP 100
Score = 37 (18.1 bits), Expect = 1.0e-38, Sum P(2) = 1.0e-38
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 40 SREPIDPPLPPSASLQNNQNPP 61
S +P P + NN +PP
Sbjct: 196 SSDPSPQTFEPLYQISNNPSPP 217
>TAIR|locus:2157477 [details] [associations]
symbol:RGL3 "RGA-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP;ISS] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0048444 "floral
organ morphogenesis" evidence=RCA] Pfam:PF03514 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0040029 EMBL:AL391150 GO:GO:0009740
HOGENOM:HOG000238577 KO:K14494 InterPro:IPR021914
InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
ProtClustDB:CLSN2684085 EMBL:AK117226 EMBL:BT005905 IPI:IPI00544591
PIR:T51475 RefSeq:NP_197251.1 UniGene:At.31541
ProteinModelPortal:Q9LF53 SMR:Q9LF53 PaxDb:Q9LF53 PRIDE:Q9LF53
EnsemblPlants:AT5G17490.1 GeneID:831615 KEGG:ath:AT5G17490
GeneFarm:4241 TAIR:At5g17490 eggNOG:NOG300920 InParanoid:Q9LF53
OMA:RRIYRIH PhylomeDB:Q9LF53 Genevestigator:Q9LF53
GermOnline:AT5G17490 Uniprot:Q9LF53
Length = 523
Score = 414 (150.8 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 120/414 (28%), Positives = 201/414 (48%)
Query: 291 NGSSGKLQQNGQPKGSSSATTRSRRKGKKSEV--VDLWTLLTLCAQAVANYDQRTANDFL 348
N +S K + G P S T+ S R E V L L CA+AV + A+ +
Sbjct: 123 NSNSNKRIRLG-P-WCDSVTSESTRSVVLIEETGVRLVQALVACAEAVQLENLSLADALV 180
Query: 349 KQIRQHSSPFGDGIQRLAHYFANGLEVRLAGTRTPVQTHLASSRASAAEVLQAYKVYVSS 408
K++ ++ + ++A YFA L R+ + A+ S E+LQ + S
Sbjct: 181 KRVGLLAASQAGAMGKVATYFAEALARRIYR----IHPSAAAIDPSFEEILQMN--FYDS 234
Query: 409 CPFNRMTFFMANRMILKLAEKATRLHIVDFGIGYGFQWPCLIQRISKRPGGPPKIRMTAI 468
CP+ + F AN+ IL+ + +H++D G+ G QWP L+Q ++ RPGGPP R+T +
Sbjct: 235 CPYLKFAHFTANQAILEAVTTSRVVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGV 294
Query: 469 EFPQPGFKPAERVEETGHRLKCYSQRFGVPFEYNTIA-QKWQNIQLEDLKIDREEMT-VV 526
P E ++E G +L +Q GV F++N + ++ +++ + + E T VV
Sbjct: 295 GNPSN----REGIQELGWKLAQLAQAIGVEFKFNGLTTERLSDLEPDMFETRTESETLVV 350
Query: 527 NCLYRMRNLPDDTVVINSPR--DAVLELIKKINPDIFIHGVVNGTYNAPFFLPRFREALF 584
N ++ + P V++ P + +L +K + P + +N FL RF EAL
Sbjct: 351 NSVFELH--P----VLSQPGSIEKLLATVKAVKPGLVTVVEQEANHNGDVFLDRFNEALH 404
Query: 585 HFSTFFDMFESTVPREDQGRMIFEREIY-GKDAMNVIACEGIERVERPETYKQWQARNLR 643
++S+ FD E V Q R++ E+Y G+ +N++A EG +R+ER ET QW+ R
Sbjct: 405 YYSSLFDSLEDGVVIPSQDRVM--SEVYLGRQILNLVATEGSDRIERHETLAQWRKRMGS 462
Query: 644 AGFKQLELDKDILKTIRTLVKSNFHPD-FVIDEAGEWMLQGWKGRLAYALSFWK 696
AGF + L D K L+ + D + ++E ++ W+ + A S WK
Sbjct: 463 AGFDPVNLGSDAFKQASLLLALSGGGDGYRVEENDGSLMLAWQTKPLIAASAWK 516
>TAIR|locus:2005516 [details] [associations]
symbol:RGA1 "REPRESSOR OF GA1-3 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IGI;RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IGI;RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=IGI;RCA] [GO:0010029 "regulation of seed
germination" evidence=IGI] [GO:2000033 "regulation of seed dormancy
process" evidence=IGI] [GO:0010187 "negative regulation of seed
germination" evidence=IGI] [GO:0010218 "response to far red light"
evidence=IEP] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IGI] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0042176
"regulation of protein catabolic process" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0046686
"response to cadmium ion" evidence=RCA] [GO:0048444 "floral organ
morphogenesis" evidence=RCA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IGI]
Pfam:PF03514 GO:GO:0007275 GO:GO:0009737 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009723 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010187 GO:GO:0042176
GO:GO:0042538 EMBL:AC005560 GO:GO:2000377 GO:GO:0040029
GO:GO:0009867 GO:GO:0009740 eggNOG:NOG243696 HOGENOM:HOG000238577
KO:K14494 ProtClustDB:CLSN2682993 GO:GO:0009938 GO:GO:2000033
InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
EMBL:Y11336 EMBL:Y15194 EMBL:AY052239 EMBL:AY054160 EMBL:BT010467
IPI:IPI00523272 PIR:D84426 RefSeq:NP_178266.1 UniGene:At.24012
ProteinModelPortal:Q9SLH3 SMR:Q9SLH3 IntAct:Q9SLH3 STRING:Q9SLH3
PRIDE:Q9SLH3 EnsemblPlants:AT2G01570.1 GeneID:814686
KEGG:ath:AT2G01570 GeneFarm:4238 TAIR:At2g01570 InParanoid:Q9SLH3
OMA:VHALMAC PhylomeDB:Q9SLH3 Genevestigator:Q9SLH3
GermOnline:AT2G01570 Uniprot:Q9SLH3
Length = 587
Score = 415 (151.1 bits), Expect = 6.4e-37, P = 6.4e-37
Identities = 113/373 (30%), Positives = 180/373 (48%)
Query: 329 LTLCAQAVANYDQRTANDFLKQIRQHSSPFGDGIQRLAHYFANGLEVRLAGTRTPVQTHL 388
L CA+A+ + A +KQI + ++++A YFA L R+ +P Q +
Sbjct: 225 LMACAEAIQQNNLTLAEALVKQIGCLAVSQAGAMRKVATYFAEALARRIYRL-SPPQNQI 283
Query: 389 ASSRASAAEVLQAYKVYVSSCPFNRMTFFMANRMILKLAEKATRLHIVDFGIGYGFQWPC 448
++ LQ + + +CP+ + F AN+ IL+ E R+H++DF + G QWP
Sbjct: 284 DHC---LSDTLQMH--FYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPA 338
Query: 449 LIQRISKRPGGPPKIRMTAIEFPQPGFKPAERVEETGHRLKCYSQRFGVPFEYNT-IAQK 507
L+Q ++ R GGPP R+T I P P ++ + E G +L ++ V FEY +A
Sbjct: 339 LMQALALREGGPPTFRLTGIGPPAPD--NSDHLHEVGCKLAQLAEAIHVEFEYRGFVANS 396
Query: 508 WQNIQLE--DLKIDREEMTVVNCLYRMRNLPDDTVVINSPRDAVLELIKKINPDIFIHGV 565
++ +L+ E VN ++ + L I + VL ++K+I P IF
Sbjct: 397 LADLDASMLELRPSDTEAVAVNSVFELHKLLGRPGGI----EKVLGVVKQIKPVIFTVVE 452
Query: 566 VNGTYNAPFFLPRFREALFHFSTFFDMFESTVPREDQGRMIFEREIY-GKDAMNVIACEG 624
+N P FL RF E+L ++ST FD E VP Q +++ E+Y GK N++ACEG
Sbjct: 453 QESNHNGPVFLDRFTESLHYYSTLFDSLEG-VPNS-QDKVM--SEVYLGKQICNLVACEG 508
Query: 625 IERVERPETYKQWQARNLRAGFKQLELDKDILKTIRTLVKS-NFHPDFVIDEAGEWMLQG 683
+RVER ET QW R +G L + K L+ N + ++E+ ++ G
Sbjct: 509 PDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFNSGQGYRVEESNGCLMLG 568
Query: 684 WKGRLAYALSFWK 696
W R S WK
Sbjct: 569 WHTRPLITTSAWK 581
>TAIR|locus:2008086 [details] [associations]
symbol:SCL3 "AT1G50420" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 EMBL:AC012561 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY056154 EMBL:AY091260 EMBL:AF036301
IPI:IPI00539428 PIR:E96540 PIR:T51235 RefSeq:NP_175459.1
UniGene:At.14826 IntAct:Q9LPR8 STRING:Q9LPR8
EnsemblPlants:AT1G50420.1 GeneID:841464 KEGG:ath:AT1G50420
GeneFarm:4258 TAIR:At1g50420 eggNOG:NOG310008 InParanoid:Q9LPR8
OMA:MVHVIDL PhylomeDB:Q9LPR8 ProtClustDB:CLSN2913643
Genevestigator:Q9LPR8 Uniprot:Q9LPR8
Length = 482
Score = 241 (89.9 bits), Expect = 4.4e-33, Sum P(2) = 4.4e-33
Identities = 56/219 (25%), Positives = 110/219 (50%)
Query: 328 LLTLCAQAVANYDQRTANDFLKQIRQHSSPFGDGIQRLAHYFANGLEVRLAGTRTPVQTH 387
LL CA VA+ + AN L+Q+ +SP GD +QR+A YF L R+ + +
Sbjct: 57 LLLTCANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRILKSWPGLYKA 116
Query: 388 LASSRA---SAAEVLQAYKVYVSSCPFNRMTFFMANRMILKLAEKATRLHIVDFGIGYGF 444
L +++ + +E + +++ P ++++ + NR IL+ E +H++D
Sbjct: 117 LNATQTRTNNVSEEIHVRRLFFEMFPILKVSYLLTNRAILEAMEGEKMVHVIDLDASEPA 176
Query: 445 QWPCLIQRISKRPGGPPKIRMTAIEFPQPGFKPAERVEETGHRLKCYSQRFGVPFEYNTI 504
QW L+Q + RP GPP +R+T + + E +E+ HRL +++ +PF++N +
Sbjct: 177 QWLALLQAFNSRPEGPPHLRITGVHHQK------EVLEQMAHRLIEEAEKLDIPFQFNPV 230
Query: 505 AQKWQNIQLEDLKIDREEMTVVNCLYRMRNL--PDDTVV 541
+ + +E L++ E V+ + ++ DD ++
Sbjct: 231 VSRLDCLNVEQLRVKTGEALAVSSVLQLHTFLASDDDLM 269
Score = 196 (74.1 bits), Expect = 4.4e-33, Sum P(2) = 4.4e-33
Identities = 43/150 (28%), Positives = 76/150 (50%)
Query: 547 DAVLELIKKINPDIFIHGVVNGTYNAPFFLPRFREALFHFSTFFDMFESTVPREDQGRMI 606
D+ L I ++P + + + +N + R E+L+ ++ FD E+ VPR Q R+
Sbjct: 330 DSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIK 389
Query: 607 FEREIYGKDAMNVIACEGIERVERPETYKQWQARNLRAGFKQLELDKDILKTIRTLVKSN 666
E+ ++G++ N+I+CEG ER ER E ++W R AGF + L + R L++
Sbjct: 390 VEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARRLLQGC 449
Query: 667 FHPDFVIDEAGEWMLQGWKGRLAYALSFWK 696
+ I E + W+ R Y++S W+
Sbjct: 450 GFDGYRIKEESGCAVICWQDRPLYSVSAWR 479
Score = 37 (18.1 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 157 NNLFEPNWMSNQGDSSSSI 175
N++ N S GDS+SS+
Sbjct: 303 NDMSNNNGYSPSGDSASSL 321
>TAIR|locus:2101694 [details] [associations]
symbol:AT3G50650 "AT3G50650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132979
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000240374
ProtClustDB:CLSN2684429 EMBL:AK229252 EMBL:AF036304 IPI:IPI00542878
PIR:T46142 PIR:T51238 RefSeq:NP_190634.1 UniGene:At.42939
PaxDb:Q9SCR0 PRIDE:Q9SCR0 EnsemblPlants:AT3G50650.1 GeneID:824228
KEGG:ath:AT3G50650 GeneFarm:4248 TAIR:At3g50650 eggNOG:NOG329237
InParanoid:Q9SCR0 OMA:LIRIKES PhylomeDB:Q9SCR0
Genevestigator:Q9SCR0 Uniprot:Q9SCR0
Length = 542
Score = 359 (131.4 bits), Expect = 2.1e-30, P = 2.1e-30
Identities = 97/373 (26%), Positives = 180/373 (48%)
Query: 334 QAVANYDQR--TANDFLKQIRQHSSPFGDGIQRLAHYFANGLEVRLAGTRTPVQTHLASS 391
+A+ +Y ++ T D L +I++ S GD IQR+ +YFA L + T +P +SS
Sbjct: 179 KAIHDYARKPETKPDTLIRIKESVSESGDPIQRVGYYFAEALSHK--ETESPS----SSS 232
Query: 392 RASAAEVLQAYKVYVSSCPFNRMTFFMANRMILKLAEKATRLHIVDFGIGYGFQWPCLIQ 451
+S + + +YK +CP+++ AN+ IL+ ++ +HIVDFGI G QW L+Q
Sbjct: 233 SSSLEDFILSYKTLNDACPYSKFAHLTANQAILEATNQSNNIHIVDFGIFQGIQWSALLQ 292
Query: 452 RISKRPGGPP-KIRMTAIEFPQPGFKPAERVEETGHRLKCYSQRFGVPFEYNTIAQKWQN 510
++ R G P +IR++ I P G P + TG+RL+ ++ + FE+ + Q
Sbjct: 293 ALATRSSGKPTRIRISGIPAPSLGDSPGPSLIATGNRLRDFAAILDLNFEFYPVLTPIQL 352
Query: 511 IQLEDLKIDREEMTVVNCLYRMRNLPDDTVVINSPRDAVLELIKKINPDIFIHGVVNGTY 570
+ ++D +E+ VVN + + L D+T L L + +NP I G +
Sbjct: 353 LNGSSFRVDPDEVLVVNFMLELYKLLDETATTVG---TALRLARSLNPRIVTLGEYEVSL 409
Query: 571 NAPFFLPRFREALFHFSTFFDMFESTVPREDQGRMIFEREIYGKDAMNVIACEGIE---- 626
N F R + +L +S F+ E + R+ + R+ ER ++G+ M+++ +
Sbjct: 410 NRVEFANRVKNSLRFYSAVFESLEPNLDRDSKERLRVERVLFGRRIMDLVRSDDDNNKPG 469
Query: 627 -RVERPETYKQWQARNLRAGFKQLELDKDILKTIRTLVKS-NFHPDFVIDEAGEWMLQ-G 683
R E +QW+ +AGF+ ++ + + L+ + N+ + + E+ +
Sbjct: 470 TRFGLMEEKEQWRVLMEKAGFEPVKPSNYAVSQAKLLLWNYNYSTLYSLVESEPGFISLA 529
Query: 684 WKGRLAYALSFWK 696
W +S W+
Sbjct: 530 WNNVPLLTVSSWR 542
>TAIR|locus:2184625 [details] [associations]
symbol:SCL8 "AT5G52510" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF03514 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AP000378 EMBL:AF036305
EMBL:AY099686 EMBL:AY128868 IPI:IPI00531227 PIR:T51239
RefSeq:NP_200064.3 UniGene:At.22412 UniGene:At.71617 STRING:Q9FYR7
PRIDE:Q9FYR7 EnsemblPlants:AT5G52510.1 GeneID:835327
KEGG:ath:AT5G52510 GeneFarm:4234 TAIR:At5g52510 eggNOG:NOG240925
HOGENOM:HOG000239354 InParanoid:Q9FYR7 OMA:PGAPWRD PhylomeDB:Q9FYR7
ProtClustDB:CLSN2680518 Genevestigator:Q9FYR7 Uniprot:Q9FYR7
Length = 640
Score = 351 (128.6 bits), Expect = 4.7e-29, P = 4.7e-29
Identities = 111/411 (27%), Positives = 193/411 (46%)
Query: 303 PKGSSSATTRSRRKGKKSEVVDLWTLLTLCAQAVANYDQRTANDFLKQIRQHSSPFGDGI 362
P SSS+++ S S V T++ + A A+A A + L ++ Q + +
Sbjct: 245 PSSSSSSSSPSTASTTTS-VCSRQTVMEI-ATAIAEGKTEIATEILARVSQTPNLERNSE 302
Query: 363 QRLAHYFANGLEVRLAGTRTPVQTHLASSRASAAEVLQAYKVYVSSCPFNRMTFFMANRM 422
++L + L R+A +PV + ++L Y++ S C F ++ F AN
Sbjct: 303 EKLVDFMVAALRSRIA---SPVTELYGKEHLISTQLL--YEL--SPC-F-KLGFEAANLA 353
Query: 423 ILKLAEK---ATRL-HIVDFGIGYGFQWPCLIQRISKRPGGP------PKIRMTAIEFPQ 472
IL A+ + H++DF IG G Q+ L++ +S R G P +++TA+
Sbjct: 354 ILDAADNNDGGMMIPHVIDFDIGEGGQYVNLLRTLSTRRNGKSQSQNSPVVKITAVANNV 413
Query: 473 PGFKP----AERVEETGHRLKCYSQRFGVPFEYNTIAQ-KWQNIQLEDLKIDREEMTVVN 527
G ER++ G L R G+ +N + + ++ E L D +E VN
Sbjct: 414 YGCLVDDGGEERLKAVGDLLSQLGDRLGISVSFNVVTSLRLGDLNRESLGCDPDETLAVN 473
Query: 528 CLYRMRNLPDDTVVINSPRDAVLELIKKINPDI--FIHGVVNGTYNAPFFLPRFREALFH 585
+++ +PD++V +PRD +L +K + P + + +N APF L R E+
Sbjct: 474 LAFKLYRVPDESVCTENPRDELLRRVKGLKPRVVTLVEQEMNSN-TAPF-LGRVSESCAC 531
Query: 586 FSTFFDMFESTVPREDQGRMIFEREIYGKDAMNVIACEGIERVERPETYKQWQARNLRAG 645
+ + ESTVP + R E I G+ +N +ACEGI+R+ER E + +W+ R AG
Sbjct: 532 YGALLESVESTVPSTNSDRAKVEEGI-GRKLVNAVACEGIDRIERCEVFGKWRMRMSMAG 590
Query: 646 FKQLELDKDILKTIRTLVKSNFHPDFVIDEAGEWMLQGWKGRLAYALSFWK 696
F+ + L + I +++++ + HP F + E + GW GR S W+
Sbjct: 591 FELMPLSEKIAESMKSR-GNRVHPGFTVKEDNGGVCFGWMGRALTVASAWR 640
>TAIR|locus:2132482 [details] [associations]
symbol:AT4G08250 "AT4G08250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AL080252 EMBL:AL161510
EMBL:BT011797 IPI:IPI00529829 PIR:T10552 RefSeq:NP_192565.1
UniGene:At.50325 DNASU:826375 EnsemblPlants:AT4G08250.1
GeneID:826375 KEGG:ath:AT4G08250 GeneFarm:4263 TAIR:At4g08250
eggNOG:NOG320032 HOGENOM:HOG000239937 InParanoid:Q9SUF5 OMA:SLEAGFP
PhylomeDB:Q9SUF5 ProtClustDB:CLSN2685964 Genevestigator:Q9SUF5
Uniprot:Q9SUF5
Length = 483
Score = 342 (125.4 bits), Expect = 5.1e-29, P = 5.1e-29
Identities = 115/395 (29%), Positives = 171/395 (43%)
Query: 316 KGKKSEVVDLWTLLTLCAQAV--ANYDQRTANDFLKQIRQHSSPFGD--GIQRLAHYFAN 371
K +S+ + L LL A A AN + L +++ SP GD ++RLA +F N
Sbjct: 95 KTDESKGLRLVHLLVAAADASTGANKSRELTRVILARLKDLVSP-GDRTNMERLAAHFTN 153
Query: 372 GLEVRLAGTRTPVQTHLASSRASAAEVLQAYKVYVSSCPFNRMTFFMANRMILKLAEKAT 431
GL L A+V+ A+++ + P+ + A + IL+ +
Sbjct: 154 GLSKLLERDSVLCPQQHRDDVYDQADVISAFELLQNMSPYVNFGYLTATQAILEAVKYER 213
Query: 432 RLHIVDFGIGYGFQWPCLIQRISKRPGGPPK--IRMTAIEFPQPGFKPAERVEETGHRLK 489
R+HIVD+ I G QW L+Q + R GP +R+TA+ G K V+ETG RL
Sbjct: 214 RIHIVDYDINEGVQWASLMQALVSRNTGPSAQHLRITALSRATNGKKSVAAVQETGRRLT 273
Query: 490 CYSQRFGVPFEYNTIAQKWQNIQLEDLKIDREEMTVVNCLYRMRNLPDDTVVINSPRDAV 549
++ G PF Y LK+ R E V+NC M +LP + S +
Sbjct: 274 AFADSIGQPFSYQHCKLDTNAFSTSSLKLVRGEAVVINC---MLHLPRFSHQTPSSVISF 330
Query: 550 LELIKKINPDI--FIHGVVNGTYNAPFFLPRFREALFHFSTFFDMFESTVPREDQGRMIF 607
L K +NP + +H V G FL RF + L FS FD E+ + + R
Sbjct: 331 LSEAKTLNPKLVTLVHEEV-GLMGNQGFLYRFMDLLHQFSAIFDSLEAGLSIANPARGFV 389
Query: 608 EREIYGKDAMNVIA--CEGIERVERPETYKQWQARNLRAGFKQLELDKDILKTIRTLVKS 665
ER G N + VE ++ QW N GFK LE+ + L+ S
Sbjct: 390 ERVFIGPWVANWLTRITANDAEVESFASWPQWLETN---GFKPLEVSFTNRCQAKLLL-S 445
Query: 666 NFHPDFVIDEAGE-WMLQGWKGRLAYALSFWKPVQ 699
F+ F ++E G+ ++ GWK R + SFW Q
Sbjct: 446 LFNDGFRVEELGQNGLVLGWKSRRLVSASFWASCQ 480
>TAIR|locus:2120106 [details] [associations]
symbol:SHR "AT4G37650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008356 "asymmetric cell division"
evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
[GO:0032350 "regulation of hormone metabolic process" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055072 "iron ion
homeostasis" evidence=IMP] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0007049 EMBL:AL035605 EMBL:AL161591
GO:GO:0048366 GO:GO:0008356 GO:GO:0055072 GO:GO:0009956
GO:GO:0032350 InterPro:IPR005202 PROSITE:PS50985 EMBL:AF233752
EMBL:BT033026 EMBL:AY074547 IPI:IPI00525426 PIR:T04722
RefSeq:NP_195480.1 UniGene:At.2816 UniGene:At.71893 IntAct:Q9SZF7
STRING:Q9SZF7 PaxDb:Q9SZF7 PRIDE:Q9SZF7 EnsemblPlants:AT4G37650.1
GeneID:829919 KEGG:ath:AT4G37650 GeneFarm:4260 TAIR:At4g37650
eggNOG:NOG301144 HOGENOM:HOG000078767 InParanoid:Q9SZF7 OMA:EIGNRME
PhylomeDB:Q9SZF7 ProtClustDB:CLSN2685807 Genevestigator:Q9SZF7
Uniprot:Q9SZF7
Length = 531
Score = 342 (125.4 bits), Expect = 1.8e-28, P = 1.8e-28
Identities = 100/394 (25%), Positives = 178/394 (45%)
Query: 327 TLLTLCAQAVANYDQRTANDFLKQIRQHSSPFGDGIQRLAHYFANGLEVRLAGT-----R 381
++L A+A ++ D A L + + SSP+GD Q+LA YF L R+ G+ R
Sbjct: 145 SVLLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGERCYR 204
Query: 382 TPVQTHLASSRASAAEVLQAYKVYVSSCPFNRMTFFMANRMILKLAEKATRLHIVDFGIG 441
T V S + + P+ AN IL+ + ++HIVD
Sbjct: 205 TMVTAAATEKTCSFESTRKTVLKFQEVSPWATFGHVAANGAILEAVDGEAKIHIVDISST 264
Query: 442 YGFQWPCLIQRISKRPGGPPKIRMTAI----EFPQPGFKPAERVEETGHRLKCYSQRFGV 497
+ QWP L++ ++ R P +R+T + +F ++E G+R++ +++ GV
Sbjct: 265 FCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASHRMMKEIGNRMEKFARLMGV 324
Query: 498 PFEYNTIAQ--KWQNIQLEDLKIDREEMTVVNCLYRMRNLPDDTVVINSPRDAVLELIKK 555
PF++N I L +L + +E+ +NC+ M + SPRDAV+ ++
Sbjct: 325 PFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGIASR----GSPRDAVISSFRR 380
Query: 556 INPDIF--------IHGVVNGTYNAPFFLPRFREALFHFSTFFDMFESTVPREDQGRMIF 607
+ P I + G G ++ F L F E L F F+ +E + PR R++
Sbjct: 381 LRPRIVTVVEEEADLVGEEEGGFDDEF-LRGFGECLRWFRVCFESWEESFPRTSNERLML 439
Query: 608 EREIYGKDAMNVIACEGIERVERPETYKQWQARNLRAGFKQLELDKDILKTIRTLVKSNF 667
ER G+ ++++ACE + ER ET ++W R +GF + ++ +R L++
Sbjct: 440 ERAA-GRAIVDLVACEPSDSTERRETARKWSRRMRNSGFGAVGYSDEVADDVRALLRRYK 498
Query: 668 HPDFVI----DEAGEWMLQGWKGRLAYALSFWKP 697
+ + D AG ++ W+ + S W+P
Sbjct: 499 EGVWSMVQCPDAAGIFLC--WRDQPVVWASAWRP 530
>TAIR|locus:2015243 [details] [associations]
symbol:AT1G63100 "AT1G63100" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 EMBL:AC010795 InterPro:IPR005202 PROSITE:PS50985
IPI:IPI00520577 PIR:D96656 RefSeq:NP_176498.1 UniGene:At.66082
ProteinModelPortal:Q9CAN3 SMR:Q9CAN3 PRIDE:Q9CAN3
EnsemblPlants:AT1G63100.1 GeneID:842613 KEGG:ath:AT1G63100
GeneFarm:4261 TAIR:At1g63100 eggNOG:NOG286854 HOGENOM:HOG000241666
InParanoid:Q9CAN3 OMA:RTKCENE PhylomeDB:Q9CAN3
ProtClustDB:CLSN2682380 Genevestigator:Q9CAN3 Uniprot:Q9CAN3
Length = 658
Score = 342 (125.4 bits), Expect = 5.2e-28, P = 5.2e-28
Identities = 99/377 (26%), Positives = 175/377 (46%)
Query: 291 NGSSGKLQQNG--QPKGSSSATTRSRRKGKKSEVVDLWTLLTLCAQAVANYDQRTANDFL 348
NGS G + + + + + R + + +L LLT C A+ + + N F+
Sbjct: 239 NGSRNPYSHRGATEERTTGNINNNNNRNDLQRDF-ELVNLLTGCLDAIRSRNIAAINHFI 297
Query: 349 KQIRQHSSPFG-DGIQRLAHYFANGLEVRLAGTRTPVQTHLAS----SRASAAEVLQAYK 403
+ +SP G + RL Y+ L +R+A P H+A R E A +
Sbjct: 298 ARTGDLASPRGRTPMTRLIAYYIEALALRVA-RMWPHIFHIAPPREFDRTVEDESGNALR 356
Query: 404 VYVSSCPFNRMTFFMANRMILKLAEKATRLHIVDFGIGYGFQWPCLIQRISKRPGGPPKI 463
P + F AN M+L+ E R+HI+DF I G QWP Q ++ R P +
Sbjct: 357 FLNQVTPIPKFIHFTANEMLLRAFEGKERVHIIDFDIKQGLQWPSFFQSLASRINPPHHV 416
Query: 464 RMTAIEFPQPGFKPAERVEETGHRLKCYSQRFGVPFEYNTIAQKWQNIQLEDLKIDREEM 523
R+T I G E + ETG RL +++ + FE++ + + ++++L L + E
Sbjct: 417 RITGI-----GESKLE-LNETGDRLHGFAEAMNLQFEFHPVVDRLEDVRLWMLHVKEGES 470
Query: 524 TVVNCLYRM-RNLPDDTVVINSPRDAVLELIKKINPDIFIHGVVNGTYNAPFFLPRFREA 582
VNC+ +M + L D T + RD L LI+ NP + +N+ R +
Sbjct: 471 VAVNCVMQMHKTLYDGTGA--AIRD-FLGLIRSTNPIALVLAEQEAEHNSEQLETRVCNS 527
Query: 583 LFHFSTFFDMFESTVPREDQGRMIFEREIYGKDAMNVIACEGIERVERPETYKQWQARNL 642
L ++S FD + + + R+ E ++G++ N++ACEG R ER ++ W+
Sbjct: 528 LKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREIRNIVACEGSHRQERHVGFRHWRRMLE 587
Query: 643 RAGFKQLEL-DKDILKT 658
+ GF+ L + ++++L++
Sbjct: 588 QLGFRSLGVSEREVLQS 604
>TAIR|locus:2020487 [details] [associations]
symbol:LAS "AT1G55580" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010223 "secondary shoot formation" evidence=IMP]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC002328 GO:GO:0010223
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG323432 EMBL:AY196482 EMBL:BT026519 EMBL:EF598379
EMBL:EF598380 EMBL:EF598381 EMBL:EF598382 EMBL:EF598383
EMBL:EF598384 EMBL:EF598385 EMBL:EF598386 EMBL:EF598387
EMBL:EF598388 EMBL:EF598389 EMBL:EF598390 EMBL:EF598391
EMBL:EF598392 EMBL:EF598393 EMBL:EF598394 EMBL:EF598395
EMBL:EF598396 EMBL:EF598397 EMBL:EF598398 EMBL:EF598399
EMBL:EF598400 EMBL:EF598401 EMBL:EF598402 IPI:IPI00532485
RefSeq:NP_175954.1 UniGene:At.45199 STRING:Q9ZWC5
EnsemblPlants:AT1G55580.1 GeneID:842007 KEGG:ath:AT1G55580
GeneFarm:4247 TAIR:At1g55580 InParanoid:Q9ZWC5 OMA:EREANHG
PhylomeDB:Q9ZWC5 ProtClustDB:CLSN2682663 Genevestigator:Q9ZWC5
Uniprot:Q9ZWC5
Length = 445
Score = 286 (105.7 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
Identities = 83/302 (27%), Positives = 139/302 (46%)
Query: 410 PFNRMTFFMANRMILKLAEKATR--LHIVDFGIGYGFQWPCLIQRISKR---PGGPP-KI 463
PF R AN+ IL E LHI+D I G QWP L+Q +++R P PP +
Sbjct: 154 PFIRFGHLTANQAILDATETNDNGALHILDLDISQGLQWPPLMQALAERSSNPSSPPPSL 213
Query: 464 RMTAIEFPQPGFKPAERVEETGHRLKCYSQRFGVPFEYNTI-------AQKWQNIQLEDL 516
R+T G + TG RL ++ G+ F+++T+ A I+L L
Sbjct: 214 RITGCGRDVTG------LNRTGDRLTRFADSLGLQFQFHTLVIVEEDLAGLLLQIRLLAL 267
Query: 517 KIDREEMTVVNCLYRMRNL-PDDTVVINSPRDAVLELIKKINPDIFIHGVVNGTYNAPFF 575
+ E VNC++ + + DD +I L IK +N I + F
Sbjct: 268 SAVQGETIAVNCVHFLHKIFNDDGDMIGH----FLSAIKSLNSRIVTMAEREANHGDHSF 323
Query: 576 LPRFREALFHFSTFFDMFESTVPREDQGRMIFEREIYGKDAMNVIACEGIERVERPETYK 635
L RF EA+ H+ FD E+T+P + R+ E+ +GK+ ++V+A E ER +R ++
Sbjct: 324 LNRFSEAVDHYMAIFDSLEATLPPNSRERLTLEQRWFGKEILDVVAAEETERKQRHRRFE 383
Query: 636 QWQARNLRAGFKQLELDKDILKTIRTLVKSNFHPD-FVIDEAGEWMLQGWKGRLAYALSF 694
W+ R GF + + L + L++ ++ + + + + GW+ R +++S
Sbjct: 384 IWEEMMKRFGFVNVPIGSFALSQAKLLLRLHYPSEGYNLQFLNNSLFLGWQNRPLFSVSS 443
Query: 695 WK 696
WK
Sbjct: 444 WK 445
Score = 77 (32.2 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 328 LLTLCAQAVANYDQRTANDFLKQIRQHSSPFGDGIQRLAHYFANGLEVRL 377
LL A V+ + A + L + +SSP GD +RL H F L VR+
Sbjct: 44 LLFTAANFVSQSNFTAAQNLLSILSLNSSPHGDSTERLVHLFTKALSVRI 93
>TAIR|locus:2165685 [details] [associations]
symbol:AT5G41920 "AT5G41920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB017067
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:BT029760 IPI:IPI00535918 RefSeq:NP_199007.1 UniGene:At.67848
UniGene:At.72727 IntAct:Q9FHZ1 DNASU:834197
EnsemblPlants:AT5G41920.1 GeneID:834197 KEGG:ath:AT5G41920
GeneFarm:4246 TAIR:At5g41920 eggNOG:NOG72098 InParanoid:Q9FHZ1
OMA:PWKGYTL PhylomeDB:Q9FHZ1 ProtClustDB:CLSN2686419
Genevestigator:Q9FHZ1 Uniprot:Q9FHZ1
Length = 405
Score = 296 (109.3 bits), Expect = 7.8e-25, P = 7.8e-25
Identities = 103/383 (26%), Positives = 173/383 (45%)
Query: 323 VDLWTLLTLCAQAVANYDQRTANDFLKQIRQHSSPFGDGIQRLAHYFANGLEVR-----L 377
+ L +LL CA+ VA R A+ L +I + SPFG +R+ YFA L+ R L
Sbjct: 38 IKLLSLLLQCAEYVATDHLREASTLLSEISEICSPFGSSPERVVAYFAQALQTRVISSYL 97
Query: 378 AGTRTPVQTHLASSRASAAEVLQAYKVYVSSCPFNRMTFFMANRMILKLAEKATRLHIVD 437
+G +P+ + + + ++ A + Y S P + + F AN+ I + + +HI+D
Sbjct: 98 SGACSPL-SEKPLTVVQSQKIFSALQTYNSVSPLIKFSHFTANQAIFQALDGEDSVHIID 156
Query: 438 FGIGYGFQWPCLIQRISKRPGGPPKIRMTAIEFPQPGF-KPAERVEETGHRLKCYSQRFG 496
+ G QWP L ++ RP IR+T GF ++ + TG RL ++
Sbjct: 157 LDVMQGLQWPALFHILASRPRKLRSIRIT-------GFGSSSDLLASTGRRLADFASSLN 209
Query: 497 VPFEYNTIAQKWQN-IQLEDLKIDREEMTVVNCLYRMRNLPDDTVVINSPRDAVLELIKK 555
+PFE++ I N I L + E VV+ + L D V N+ LE++++
Sbjct: 210 LPFEFHPIEGIIGNLIDPSQLATRQGEAVVVH--WMQHRLYD--VTGNNLE--TLEILRR 263
Query: 556 INPDIFIHGVVNGTYN-APFFLPRFREALFHFSTFFDMFESTVPREDQGRMIFEREIYGK 614
+ P++ +Y+ FL RF EAL ++S FD + E R E+ + G
Sbjct: 264 LKPNLITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGEESGERFTVEQIVLGT 323
Query: 615 DAMNVIACEGIERVERPETYKQWQARNLRAGFKQLELDKDILKTIRTLVKS-NFHPDFVI 673
+ N++A G R +R +W+ R GF+ + L + L+ ++ ++
Sbjct: 324 EIRNIVAHGGGRR-KR----MKWKEELSRVGFRPVSLRGNPATQAGLLLGMLPWNGYTLV 378
Query: 674 DEAGEWMLQGWKGRLAYALSFWK 696
+E G L GWK S WK
Sbjct: 379 EENGTLRL-GWKDLSLLTASAWK 400
>TAIR|locus:2083073 [details] [associations]
symbol:AT3G49950 "AT3G49950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132978
InterPro:IPR005202 PROSITE:PS50985 eggNOG:NOG309215 EMBL:BT012553
EMBL:AK226623 IPI:IPI00534186 PIR:T45848 RefSeq:NP_190564.1
UniGene:At.50260 EnsemblPlants:AT3G49950.1 GeneID:824157
KEGG:ath:AT3G49950 GeneFarm:4259 TAIR:At3g49950
HOGENOM:HOG000241523 InParanoid:Q9SN22 OMA:MSMDFRV PhylomeDB:Q9SN22
ProtClustDB:CLSN2684384 Genevestigator:Q9SN22 Uniprot:Q9SN22
Length = 410
Score = 293 (108.2 bits), Expect = 6.6e-24, P = 6.6e-24
Identities = 101/387 (26%), Positives = 171/387 (44%)
Query: 328 LLTLCAQAVANYDQRTANDFLKQIRQHSSPFGDGIQRLAHYFANGLEVRLAGTRTPVQTH 387
LL CA A+ + D + L + + P GD QRL F L R A ++TP +
Sbjct: 30 LLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSR-AVSKTPTLSS 88
Query: 388 LASSRASAAEVLQAYKV-----YVSSCPFNRMTFFMANRMILKLAEKATRLHIVDFGIGY 442
S A E L + V +V P++R F AN IL E + +HIVD + +
Sbjct: 89 TISFLPQADE-LHRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLSLTH 147
Query: 443 GFQWPCLIQRISKRPGGPPKIRMTAIEFPQPGFKPAERV--EETGHRLKCYSQRFGVPFE 500
Q P LI ++ R PP + + F P + EE G +L ++ + E
Sbjct: 148 CMQIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPFINISYEELGSKLVNFATTRNITME 207
Query: 501 YNTIAQKWQN---IQLEDLKI---DREEMTVVNCLYRMRNLPDDTVVINSP--RDAVLEL 552
+ + + + L+ L+I E VVNC +R +P++ + +S R L+
Sbjct: 208 FTIVPSTYSDGFSSLLQQLRIYPSSFNEALVVNCHMMLRYIPEEPLTSSSSSLRTVFLKQ 267
Query: 553 IKKINPDIFIHGVVNGTYNAPFFLPRFREALFHFSTFFDMFESTVPREDQGRMIFEREIY 612
++ +NP I + + + R + A F+ F+ F++T + R +E EI
Sbjct: 268 LRSLNPRIVTLIEEDVDLTSENLVNRLKSA---FNYFWIPFDTTDTFMSEQRRWYEAEIS 324
Query: 613 GKDAMNVIACEGIERVERPETYKQWQARNLRAGFKQLELDKDILKTIRTLVKSNFHP-DF 671
K NV+A EG ERVER ET ++W R A F + + +D + ++ +++ +
Sbjct: 325 WK-IENVVAKEGAERVERTETKRRWIERMREAEFGGVRVKEDAVADVKAMLEEHAVGWGM 383
Query: 672 VIDEAGEWMLQGWKGRLAYALSFWKPV 698
++ E ++ WKG + W P+
Sbjct: 384 KKEDDDESLVLTWKGHSVVFATVWVPI 410
>UNIPROTKB|Q84MM9 [details] [associations]
symbol:MOC1 "Protein MONOCULM 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0010014 "meristem initiation" evidence=IMP] Pfam:PF03514
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY242058 EMBL:AP003616 Gramene:Q84MM9
eggNOG:NOG323432 GO:GO:0010014 Uniprot:Q84MM9
Length = 441
Score = 197 (74.4 bits), Expect = 4.3e-20, Sum P(2) = 4.3e-20
Identities = 59/220 (26%), Positives = 100/220 (45%)
Query: 291 NGSSGKLQQNGQPKGSSSATTRSR--RKGKKSEVVDLWTLLTLCAQAVANYDQRTANDFL 348
+ +SG + NG G ++A ++ + LL CA + D A
Sbjct: 14 DNNSGGCKNNGGGGGEAAAAVEGGGDQRAVAAAAPSTRDLLLACADLLQRGDLPAARRAA 73
Query: 349 KQI-RQHSSPFGDGIQRLAHYFANGLEVRLAGTRTPVQTHLASSRASAAEVLQAYKVYVS 407
+ + +SP GD RLA++FA L +R+ + A A AY +
Sbjct: 74 EIVLAAAASPRGDAADRLAYHFARALALRVDAKAGHGHVVVGGGAARPASS-GAYLAFNQ 132
Query: 408 SCPFNRMTFFMANRMILKLAEKATRLHIVDFGIGYGFQWPCLIQRISKR--PG-GPPKIR 464
PF R AN+ IL+ + A R+HI+D +G QWP L+Q I++R P GPP++R
Sbjct: 133 IAPFLRFAHLTANQAILEAVDGARRVHILDLDAVHGVQWPPLLQAIAERADPALGPPEVR 192
Query: 465 MTAIEFPQPGFKPAERVEETGHRLKCYSQRFGVPFEYNTI 504
+T + + + TG+RL+ +++ +PF + +
Sbjct: 193 VTGAGADR------DTLLRTGNRLRAFARSIHLPFHFTPL 226
Score = 118 (46.6 bits), Expect = 4.3e-20, Sum P(2) = 4.3e-20
Identities = 46/189 (24%), Positives = 83/189 (43%)
Query: 516 LKIDREEMTVVNCLYRMRNLPDDTVVINSPRDAVLELIKKINPDIFI-----HGVVNGTY 570
L+ +E VNC+ + NL + A L+ +K ++P + G G
Sbjct: 258 LEFHPDETLAVNCVMFLHNLAGHDELA-----AFLKWVKAMSPAVVTIAEREAGGGGGGG 312
Query: 571 NAPFFLPR-FREALFHFSTFFDMFESTVPREDQGRMIFEREIYGKDAMNVIACEGIERVE 629
+ LPR A+ H+S F+ E+TVP + R+ E+E+ G++ + G R
Sbjct: 313 DHIDDLPRRVGVAMDHYSAVFEALEATVPPGSRERLAVEQEVLGREIEAAVGPSG-GRWW 371
Query: 630 RPETYKQWQARNLRAGFKQLELDKDILKTIRTLVKSNFHPD-FVIDEAGEWMLQGWKGRL 688
R ++W AGF L + R L++ ++ + +++ EA GW+ R
Sbjct: 372 RG--IERWGGAARAAGFAARPLSAFAVSQARLLLRLHYPSEGYLVQEARGACFLGWQTRP 429
Query: 689 AYALSFWKP 697
++S W+P
Sbjct: 430 LLSVSAWQP 438
>TAIR|locus:2087994 [details] [associations]
symbol:AT3G13840 "AT3G13840" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB028610
InterPro:IPR005202 PROSITE:PS50985 IPI:IPI00544801
RefSeq:NP_188000.1 UniGene:At.64114 PaxDb:Q9LRW3 PRIDE:Q9LRW3
EnsemblPlants:AT3G13840.1 GeneID:820596 KEGG:ath:AT3G13840
GeneFarm:4262 TAIR:At3g13840 eggNOG:NOG262645 HOGENOM:HOG000240132
InParanoid:Q9LRW3 OMA:WFAFPNN PhylomeDB:Q9LRW3
ProtClustDB:CLSN2684819 Genevestigator:Q9LRW3 Uniprot:Q9LRW3
Length = 510
Score = 203 (76.5 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 95/405 (23%), Positives = 163/405 (40%)
Query: 304 KGSSSATTRSRRKGKKSEVVDLWT--LLTLCAQAVANYDQRTANDFLKQIRQHSSPFGDG 361
+ A S + K W LL CA A+ + +L + + +S GD
Sbjct: 122 RSKRKAIKSSEKSSKDGNKEGRWAEKLLNPCALAITASNSSRVQHYLCVLSELASSSGDA 181
Query: 362 IQRLAHYFANGLEVRLAGTRTPVQTHLASSRASA-AEVLQA--YKVYVSSCPFNRMTFFM 418
+RLA + L+ L+ + + ASA ++ Q K Y S P+ + M
Sbjct: 182 NRRLAAFGLRALQHHLSSSSVSSSFWPVFTFASAEVKMFQKTLLKFYEVS-PWFALPNNM 240
Query: 419 ANRMILKLAEKATR----LHIVDFGIGYGFQWPCLIQRISKR-PGGPPKIRMTAIEFPQP 473
AN IL++ + + LHI+D G+ +G QWP L++ +S R G PP++R+T I
Sbjct: 241 ANSAILQILAQDPKDKKDLHIIDIGVSHGMQWPTLLEALSCRLEGPPPRVRITVISDLTA 300
Query: 474 GFKPAERVEETGHRLKCYSQRFGVPFEYNTIAQKWQNIQLEDLKIDREEMTVVNCLYRMR 533
P V G+ F + N +QL D E +V +R+
Sbjct: 301 DI-PFS-VGPPGYNYGSQLLGFARSLKINLQISVLDKLQLIDTS--PHENLIVCAQFRLH 356
Query: 534 NLPDDTVVINSPRDAVLELIKKINPDIFIHGVVNGTYNAPF-FLPRFREALFHFSTFFDM 592
+L IN R L+ ++ + P + NG ++ F F + L + F D
Sbjct: 357 HLKHS---INDERGETLKAVRSLRPKGVVLCENNGECSSSADFAAGFSKKLEYVWKFLDS 413
Query: 593 FESTVPREDQGRMIFEREIYGKDAMNVIACEGIERVERPETYKQWQARNLRAGFKQLELD 652
S E+ ER++ +A V+ G + E ++W R AGF +
Sbjct: 414 TSSGFKEENSE----ERKLMEGEATKVLMNAG----DMNEGKEKWYERMREAGFFVEAFE 465
Query: 653 KDILKTIRTLV-KSNFHPDFVIDEAGEWMLQGWKGRLAYALSFWK 696
+D + ++L+ K + + + +++ + WKG S WK
Sbjct: 466 EDAVDGAKSLLRKYDNNWEIRMEDGDTFAGLMWKGEAVSFCSLWK 510
>TAIR|locus:2055622 [details] [associations]
symbol:HAM1 "AT2G45160" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] Pfam:PF03514
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051301
GO:GO:0003700 GO:GO:0006351 GO:GO:0048768 GO:GO:0010492
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000239326
ProtClustDB:CLSN2683334 EMBL:BT004053 EMBL:BT020591 IPI:IPI00534274
PIR:B84887 RefSeq:NP_182041.1 UniGene:At.27046 UniGene:At.67081
UniGene:At.74179 STRING:Q7XJM8 PaxDb:Q7XJM8 PRIDE:Q7XJM8
EnsemblPlants:AT2G45160.1 GeneID:819124 KEGG:ath:AT2G45160
GeneFarm:4226 TAIR:At2g45160 eggNOG:NOG320780 InParanoid:Q7XJM8
OMA:HRWIERS PhylomeDB:Q7XJM8 Genevestigator:Q7XJM8 Uniprot:Q7XJM8
Length = 640
Score = 181 (68.8 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 81/361 (22%), Positives = 148/361 (40%)
Query: 345 NDFLKQIRQHSSPFGDGIQRLAHYFANGLEVRLAGTRTPVQTHLASSRASAAEVLQAYKV 404
N L H SPF QR A + A L + +P L + + AY+
Sbjct: 301 NHHLNTSSNHKSPF----QRAASHIAEALLSLIHNESSPP---LITPENLILRIA-AYRS 352
Query: 405 YVSSCPFNRMTFFMANRMILKLAEKA--TRLHIVDFGIGYGFQWPCLIQRISKRPGGPPK 462
+ + PF + F AN+ IL+ ++ R+HI+DF +GYG QW L+Q ++ GG +
Sbjct: 353 FSETSPFLQFVNFTANQSILESCNESGFDRIHIIDFDVGYGGQWSSLMQELASGVGGRRR 412
Query: 463 IRMTAIEF----PQPGFKPAE-RVEETGHRLKCYSQRFGVPFEYNTIA-QKWQNIQLEDL 516
R ++++ P P E + T LK ++ +PFE ++ + N L
Sbjct: 413 NRASSLKLTVFAPPPSTVSDEFELRFTEENLKTFAGEVKIPFEIELLSVELLLNPAYWPL 472
Query: 517 KIDREEMTVVNCLYRMRNLPDDTVVINSPRDAVLELIKKINPDIFIHGVVNGTYN-APFF 575
+ E + NLP ++V + +L +K+++P+I + N APF
Sbjct: 473 SLRSSEKEAIAV-----NLPVNSVA-SGYLPLILRFLKQLSPNIVVCSDRGCDRNDAPFP 526
Query: 576 LPRFREALFHFSTFFDMFESTVPREDQGRMIFEREIYGKDAMNVIACEGIERVERPETYK 635
+H S + ES ++Q ER + + ++ + + +ER
Sbjct: 527 NAVIHSLQYHTS----LLESLDANQNQDDSSIER-FWVQPSIEKLLMKRHRWIERSPP-- 579
Query: 636 QWQARNLRAGFKQLELDKDILKTIRTLVKSNFHPDFVIDEAGEWMLQGWKGRLAYALSFW 695
W+ + GF L + L++ N F +++ ++ W+ + +S W
Sbjct: 580 -WRILFTQCGFSPASLSQMAEAQAECLLQRNPVRGFHVEKRQSSLVMCWQRKELVTVSAW 638
Query: 696 K 696
K
Sbjct: 639 K 639
>TAIR|locus:1009023400 [details] [associations]
symbol:AT5G67411 "AT5G67411" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 EMBL:AB007645
InterPro:IPR005202 PROSITE:PS50985 EMBL:DQ487622 IPI:IPI00657013
RefSeq:NP_001032167.1 UniGene:At.65711 EnsemblPlants:AT5G67411.1
GeneID:3771574 KEGG:ath:AT5G67411 TAIR:At5g67411 eggNOG:NOG309215
PhylomeDB:Q2V2T9 Genevestigator:Q2V2T9 Uniprot:Q2V2T9
Length = 202
Score = 156 (60.0 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 55/195 (28%), Positives = 93/195 (47%)
Query: 449 LIQRISKRPGGPPKIRMTAI----EFPQPGFKPAERVEETGHRLKCYSQRFGVPFEYNTI 504
+ ++ K+P PP +++T I EF P EE G +L ++ V E+ I
Sbjct: 10 MANKLHKKP--PPLLKLTVIASDAEFHPPPLLGIS-YEELGSKLVNFATTRNVAMEFRII 66
Query: 505 AQKWQN---IQLEDLKIDR---EEMTVVNCLYRMRNLPDDTVVINSPRDAVLELIKKINP 558
+ + + +E L+ID E VVNC + +PD+ + N R L+ ++ +NP
Sbjct: 67 SSSYSDGLSSLIEQLRIDPFVFNEALVVNCHMMLHYIPDEILTSNL-RSVFLKELRDLNP 125
Query: 559 DIFIHGVVNGTYNAPFFLPRFREALFHFSTF-FDMFESTVPREDQGRMIFEREIYGKDAM 617
I + + + F+ R R +L+++ +D E + R + R +E +I K
Sbjct: 126 TIVTLIDEDSDFTSTNFISRLR-SLYNYMWIPYDTAEMFLTRGSEQRQWYEADISWK-ID 183
Query: 618 NVIACEGIERVERPE 632
NV+A EG ERVER E
Sbjct: 184 NVVAKEGAERVERLE 198
>TAIR|locus:2115340 [details] [associations]
symbol:HAM4 "AT4G36710" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048831 "regulation of shoot system development" evidence=IGI]
Pfam:PF03514 GO:GO:0005634 GO:GO:0030154 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0048831
EMBL:AL161589 EMBL:Z99708 InterPro:IPR005202 PROSITE:PS50985
EMBL:AK118497 IPI:IPI00538111 PIR:E85433 RefSeq:NP_195389.4
UniGene:At.31304 PaxDb:O23210 PRIDE:O23210 DNASU:829824
EnsemblPlants:AT4G36710.1 GeneID:829824 KEGG:ath:AT4G36710
GeneFarm:4264 TAIR:At4g36710 eggNOG:NOG271584 HOGENOM:HOG000090733
InParanoid:O23210 OMA:ELVLCWH ProtClustDB:CLSN2717261
Genevestigator:O23210 Uniprot:O23210
Length = 486
Score = 171 (65.3 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 82/369 (22%), Positives = 160/369 (43%)
Query: 336 VANYDQRTANDFLKQIRQH-SSPFGDGIQRLAHYFANGLEVRLAGT-RTPVQTHLASSRA 393
V + + + A L ++ Q SP G +QR A YF L L G+ R P++ SS +
Sbjct: 133 VESDELQLAQVVLSRLNQRLRSPAGRPLQRAAFYFKEALGSFLTGSNRNPIRL---SSWS 189
Query: 394 SAAEVLQAYKVYVSSCPFNRMTFFMANRMIL-KLAEKATR--LHIVDFGIGYGFQWPCLI 450
+ ++A K Y P + F AN+ IL L+ +++ +H+VDF IG+G Q+ L+
Sbjct: 190 EIVQRIRAIKEYSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFGGQYASLM 249
Query: 451 QRISKRPGGPPKIRMTAIEFPQPGFKPAERVEETGHRLKCYSQRFGVPFEYNTIAQK-WQ 509
+ I+++ +R+TA+ + + V+E L ++ + F+ + K ++
Sbjct: 250 REITEKSVSGGFLRVTAVVAEECAVE-TRLVKEN---LTQFAAEMKIRFQIEFVLMKTFE 305
Query: 510 NIQLEDLKIDREEMTVVNCLYRM-RNLPDDTVVINSPRDAVLELIKKINPDIFIHGVVNG 568
+ + ++ E TVV + R L T +N+ R +++ ++ + + +G
Sbjct: 306 MLSFKAIRFVEGERTVVLISPAIFRRLSGITDFVNNLRRVSPKVVVFVDSEGWTEIAGSG 365
Query: 569 TYNAPFFLPRFREALFHFSTFFDMFESTVPREDQGRMIFEREIYGKDAMNVIACEGIERV 628
++ F AL ++ + ++ P D + I E + + ++ +R
Sbjct: 366 SFRREFV-----SALEFYTMVLESLDAAAPPGDLVKKIVEAFVL-RPKISAAVETAADRR 419
Query: 629 ERPETYKQWQARNLRAGFKQLELDKDI-LKTIRTLVKSNFHPDFVIDEAGEWMLQGWKGR 687
E W+ AG + ++L + + L K+ V GE +L W GR
Sbjct: 420 HTGEM--TWREAFCAAGMRPIQLSQFADFQAECLLEKAQVRGFHVAKRQGELVLC-WHGR 476
Query: 688 LAYALSFWK 696
A S W+
Sbjct: 477 ALVATSAWR 485
>TAIR|locus:2101801 [details] [associations]
symbol:HAM2 "AT3G60630" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0007020 "microtubule
nucleation" evidence=RCA] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0051301 GO:GO:0003700 GO:GO:0006351
GO:GO:0048768 GO:GO:0010492 EMBL:AL162295 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY064062 EMBL:AY096372 EMBL:EU550731
EMBL:EU550732 EMBL:EU550733 EMBL:EU550734 EMBL:EU550735
EMBL:EU550736 EMBL:EU550737 EMBL:EU550738 EMBL:EU550739
EMBL:EU550740 EMBL:EU550741 EMBL:EU550742 EMBL:EU550743
EMBL:EU550744 EMBL:EU550745 EMBL:EU550746 EMBL:EU550747
EMBL:EU550748 EMBL:EU550749 EMBL:EU550750 EMBL:EU550752
EMBL:EU550754 EMBL:EU550751 EMBL:EU550753 IPI:IPI00520916
PIR:T47874 RefSeq:NP_191622.1 UniGene:At.27084 IntAct:Q9M000
EnsemblPlants:AT3G60630.1 GeneID:825234 KEGG:ath:AT3G60630
GeneFarm:4227 TAIR:At3g60630 eggNOG:NOG261649 HOGENOM:HOG000239326
InParanoid:Q9M000 OMA:ANQTILE PhylomeDB:Q9M000
ProtClustDB:CLSN2683334 Genevestigator:Q9M000 Uniprot:Q9M000
Length = 623
Score = 165 (63.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 71/308 (23%), Positives = 128/308 (41%)
Query: 399 LQAYKVYVSSCPFNRMTFFMANRMILKLAEKATRLHIVDFGIGYGFQWPCLIQRIS---K 455
+ AY+ + + PF + F AN+ IL+ E R+HIVDF IGYG QW LIQ ++
Sbjct: 327 IAAYRAFSETSPFLQFVNFTANQTILESFEGFDRIHIVDFDIGYGGQWASLIQELAGKRN 386
Query: 456 RPGGPPKIRMTAIEFPQPGFKPAERVEETGHRLKCYSQRFGVPFEYNTIAQK-WQNIQLE 514
R P +++TA P E + T L+ ++ GV FE + + N
Sbjct: 387 RSSSAPSLKITAFASPSTVSDEFE-LRFTEENLRSFAGETGVSFEIELLNMEILLNPTYW 445
Query: 515 DLKIDREEMTVVNCLYRMRNLPDDTVVINSPRDAVLELIKKINPDIFIHGVVNGTYN--A 572
L + R + NLP ++V + +L +K+I+P++ + + N A
Sbjct: 446 PLSLFRSSEKEAIAV----NLPISSMV-SGYLPLILRFLKQISPNVVVCSDRSCDRNNDA 500
Query: 573 PFFLPR-FREALFHFSTFFDMFESTVPREDQGRMIFEREIYGKDAMNVIACEGIERVERP 631
PF P AL ++++ + +S + ER ++ R
Sbjct: 501 PF--PNGVINALQYYTSLLESLDSGNLNNAEAATSIERFCVQPSIQKLLT----NRYRWM 554
Query: 632 ETYKQWQARNLRAGFKQLELDKDILKTIRTLVKSNFHPDFVIDE---AGEWMLQGWKGRL 688
E W++ + GF + L + L++ N F +++ + ++ W+ +
Sbjct: 555 ERSPPWRSLFGQCGFTPVTLSQTAETQAEYLLQRNPMRGFHLEKRQSSSPSLVLCWQRKE 614
Query: 689 AYALSFWK 696
+S WK
Sbjct: 615 LVTVSAWK 622
Score = 46 (21.3 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 16/50 (32%), Positives = 22/50 (44%)
Query: 14 NPLQFDRGSVSTYSNRNHVDKFKLKQSREP---IDPPLPPSASLQNNQNP 60
NPL F G + N +KF++ + P DPP P A N+ P
Sbjct: 155 NPL-FGYGF--PFQNAPEEEKFQISINPNPGFFSDPPSSPPAKRLNSGQP 201
>TAIR|locus:2126901 [details] [associations]
symbol:HAM3 "AT4G00150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010492 "maintenance of shoot apical meristem identity"
evidence=IGI] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048768 "root hair cell tip growth" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0048768 GO:GO:0010492 EMBL:AL161471
EMBL:AF069299 InterPro:IPR005202 PROSITE:PS50985
HOGENOM:HOG000239326 eggNOG:NOG320780 EMBL:AF462831 EMBL:AY133537
EMBL:AF036303 EMBL:EU550755 EMBL:EU550756 EMBL:EU550757
EMBL:EU550758 EMBL:EU550759 EMBL:EU550760 EMBL:EU550761
EMBL:EU550762 EMBL:EU550763 EMBL:EU550764 EMBL:EU550765
EMBL:EU550766 EMBL:EU550767 EMBL:EU550768 EMBL:EU550769
EMBL:EU550770 EMBL:EU550771 EMBL:EU550772 EMBL:EU550773
EMBL:EU550774 EMBL:EU550775 EMBL:EU550776 EMBL:EU550777
IPI:IPI00542979 PIR:T01343 PIR:T51237 RefSeq:NP_191926.1
UniGene:At.3732 UniGene:At.67226 IntAct:O81316
EnsemblPlants:AT4G00150.1 GeneID:828208 KEGG:ath:AT4G00150
GeneFarm:4228 TAIR:At4g00150 InParanoid:O81316 OMA:KTPPWRA
PhylomeDB:O81316 ProtClustDB:CLSN2916162 Genevestigator:O81316
Uniprot:O81316
Length = 558
Score = 159 (61.0 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 79/367 (21%), Positives = 136/367 (37%)
Query: 333 AQAVANYDQRTANDFLKQIRQH-SSPFGDGIQRLAHYFANGLEVRLAGTRTPVQTHLASS 391
A V D A L ++ Q SSP G ++R A YF L L + +
Sbjct: 212 AAEVIESDTCLAQGILARLNQQLSSPVGKPLERAAFYFKEALNNLLHNVSQTLNPY---- 267
Query: 392 RASAAEVLQAYKVYVSSCPFNRMTFFMANRMILKLAEKATRLHIVDFGIGYGFQWPCLIQ 451
S + AYK + P + F +N+ +L+ RLHI+DF IGYG QW L+Q
Sbjct: 268 --SLIFKIAAYKSFSEISPVLQFANFTSNQALLESFHGFHRLHIIDFDIGYGGQWASLMQ 325
Query: 452 RISKRPGGPP-KIRMTAIEFPQPGFKPAERVEETGHRLKCYSQRFGVPFEYNTIAQKWQN 510
+ R P +++T F P + T LK ++ + + ++
Sbjct: 326 ELVLRDNAAPLSLKITV--FASPANHDQLELGFTQDNLKHFASEINISLDIQVLSLDLLG 383
Query: 511 IQLEDLKIDREEMTVVNCLYRMRNLPDDTVVINSPRDAVLELIKKINPDIFIHGVVNGTY 570
++E + V +LP VL +K ++P I + G
Sbjct: 384 SISWPNSSEKEAVAVNISAASFSHLP-----------LVLRFVKHLSPTIIVCSD-RGCE 431
Query: 571 NAPF-FLPRFREALFHFSTFFDMFESTVPREDQGRMIFEREIYGKDAMNVIACEGIERVE 629
F + +L + F+ ++ D + I ER + + ++ + +E
Sbjct: 432 RTDLPFSQQLAHSLHSHTALFESLDAVNANLDAMQKI-ERFLIQPEIEKLVL-DRSRPIE 489
Query: 630 RPETYKQWQARNLRAGFKQLELDKDILKTIRTLVKSNFHPDFVIDEAGEWMLQGWKGRLA 689
RP WQA L+ GF + LV+ F +++ +L W+
Sbjct: 490 RP--MMTWQAMFLQMGFSPVTHSNFTESQAECLVQRTPVRGFHVEKKHNSLLLCWQRTEL 547
Query: 690 YALSFWK 696
+S W+
Sbjct: 548 VGVSAWR 554
>UNIPROTKB|Q6DLS1 [details] [associations]
symbol:SCL1 "SCARECROW-like protein" species:3708 "Brassica
napus" [GO:0005515 "protein binding" evidence=IPI] Pfam:PF03514
GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202 PROSITE:PS50985
EMBL:AY664405 IntAct:Q6DLS1 Uniprot:Q6DLS1
Length = 461
Score = 135 (52.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 76/363 (20%), Positives = 147/363 (40%)
Query: 344 ANDFLKQIRQH-SSPFGDGIQRLAHYFANGLEVRLAGTRTPVQTHLASSRASAAEVLQAY 402
A+ L Q+ Q + G +QR A YF L L GT + L S + + ++A
Sbjct: 118 AHVVLSQLNQRLQTSAGRPLQRAAFYFKEALGSLLTGTN---RNQLFSW-SDIVQKIRAI 173
Query: 403 KVYVSSCPFNRMTFFMANRMIL-KLAEKATR--LHIVDFGIGYGFQWPCLIQRISKRPGG 459
K + P + F AN+ IL L+ +++ +H+VDF IG+G Q+ L++ I+++
Sbjct: 174 KEFSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFGGQYASLMREIAEKSAN 233
Query: 460 PPKIRMTAIEFPQPGFKPAERVEETGHRLKCYSQRFGVPFEYNTIAQK-WQNIQLEDLK- 517
+R+TA+ + V+E L ++ + F+ + K ++ + + ++
Sbjct: 234 GGFLRVTAVVAEDCAVE-TRLVKEN---LTQFAAEMKIRFQIEFVLMKTFEILSFKAIRF 289
Query: 518 IDREEMTVVNCLYRMRNLPDDTVVINSPRDAVLELIKKINPDIFIHGVVNG---TYNAPF 574
+D E V+ R + +N+ + +++P++ + G T +
Sbjct: 290 VDGERTVVLISPAIFRRVIGIAEFVNN--------LGRVSPNVVVFVDSEGCTETAGSGS 341
Query: 575 FLPRFREALFHFSTFFDMFESTVPREDQGRMIFEREIYGKDAMNVIACEGIERVERPETY 634
F F A ++ + ++ P D + I E + + R T
Sbjct: 342 FRREFVSAFEFYTMVLESLDAAAPPGDLVKKIVETFLLRPKISAAVETAANRRSAGQMT- 400
Query: 635 KQWQARNLRAGFKQLELDKDI-LKTIRTLVKSNFHPDFVIDEAGEWMLQGWKGRLAYALS 693
W+ AG + ++L + + L K+ V GE +L W GR A S
Sbjct: 401 --WREMLCAAGMRPVQLSQFADFQAECLLEKAQVRGFHVAKRQGELVLC-WHGRALVATS 457
Query: 694 FWK 696
W+
Sbjct: 458 AWR 460
>UNIPROTKB|Q1AHE4 [details] [associations]
symbol:SCL "SCARECROW-like protein" species:4081 "Solanum
lycopersicum" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF03514 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:DQ087265 UniGene:Les.23827 Uniprot:Q1AHE4
Length = 71
Score = 99 (39.9 bits), Expect = 0.00039, P = 0.00039
Identities = 24/71 (33%), Positives = 36/71 (50%)
Query: 625 IERVERPETYKQWQARNLRAGFKQLELDKDILKTIRTLVKSNFHPDFVIDEAGEWMLQGW 684
+ERVER E +W+ R AGF Q L + I++L++ + + + E ML GW
Sbjct: 1 MERVERHELLGKWKLRFTMAGFHQYPLSSYVNSVIKSLMRC-YSEHYTLVEKDGAMLLGW 59
Query: 685 KGRLAYALSFW 695
K R + S W
Sbjct: 60 KKRNLISASAW 70
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 700 677 0.00078 121 3 11 22 0.41 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 624 (66 KB)
Total size of DFA: 378 KB (2186 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 61.80u 0.24s 62.04t Elapsed: 00:00:03
Total cpu time: 61.81u 0.24s 62.05t Elapsed: 00:00:03
Start: Fri May 10 23:19:39 2013 End: Fri May 10 23:19:42 2013