Query 045056
Match_columns 299
No_of_seqs 163 out of 1116
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 16:27:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045056.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045056hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 1.3E-58 4.5E-63 437.4 31.9 278 1-299 6-300 (439)
2 2bgh_A Vinorine synthase; VS, 100.0 2.7E-58 9.1E-63 433.2 28.0 279 1-299 3-287 (421)
3 2xr7_A Malonyltransferase; xen 100.0 9.6E-54 3.3E-58 405.7 22.7 289 3-299 2-315 (453)
4 2e1v_A Acyl transferase; BAHD 100.0 1.9E-52 6.4E-57 397.0 23.2 283 2-299 6-313 (454)
5 2rkv_A Trichothecene 3-O-acety 100.0 3.9E-43 1.3E-47 332.6 23.1 264 24-297 5-302 (451)
6 1q9j_A PAPA5, polyketide synth 98.6 7.4E-06 2.5E-10 75.3 20.6 238 22-297 6-275 (422)
7 2jgp_A Tyrocidine synthetase 3 97.7 0.003 1E-07 59.7 19.9 203 63-293 133-361 (520)
8 1l5a_A Amide synthase, VIBH; n 97.6 0.0046 1.6E-07 56.8 18.7 199 63-293 35-265 (436)
9 4hvm_A Tlmii; PSI-biology, mid 97.5 0.0016 5.6E-08 61.1 14.5 238 22-293 12-286 (493)
10 2vsq_A Surfactin synthetase su 96.8 0.034 1.2E-06 58.7 17.5 208 63-293 49-286 (1304)
11 2xhg_A Tyrocidine synthetase A 96.7 0.036 1.2E-06 51.2 14.9 240 22-294 16-293 (466)
12 3fot_A 15-O-acetyltransferase; 96.6 0.025 8.7E-07 53.7 12.7 144 153-297 177-348 (519)
13 3cla_A Type III chloramphenico 85.1 0.66 2.3E-05 38.5 3.6 29 154-182 181-209 (213)
14 2i9d_A Chloramphenicol acetylt 84.4 0.74 2.5E-05 38.3 3.6 28 154-181 189-216 (217)
15 1q23_A Chloramphenicol acetylt 84.1 0.77 2.6E-05 38.3 3.6 29 154-182 185-213 (219)
16 3b8k_A PDCE2;, dihydrolipoylly 82.6 0.93 3.2E-05 38.3 3.6 30 154-183 204-233 (239)
17 1scz_A E2, dihydrolipoamide su 82.2 1 3.5E-05 37.9 3.6 30 154-183 196-225 (233)
18 1dpb_A Dihydrolipoyl-transacet 82.1 1 3.5E-05 38.2 3.6 30 154-183 208-237 (243)
19 3rqc_A Probable lipoamide acyl 82.0 0.88 3E-05 38.1 3.2 31 154-184 187-217 (224)
20 2ii3_A Lipoamide acyltransfera 81.2 1.1 3.9E-05 38.4 3.6 30 154-183 224-253 (262)
21 3mae_A 2-oxoisovalerate dehydr 77.7 1.7 5.9E-05 37.1 3.6 31 154-184 210-240 (256)
22 3l60_A Branched-chain alpha-ke 76.8 1.9 6.5E-05 36.7 3.6 30 154-183 205-234 (250)
23 2k1o_A Putative; repressor, tr 63.4 21 0.00072 22.6 5.3 49 224-280 13-61 (66)
24 3dva_I Dihydrolipoyllysine-res 59.3 1.9 6.7E-05 39.7 0.0 30 154-183 391-420 (428)
25 1x93_A Hypothetical protein HP 46.8 36 0.0012 20.8 4.2 39 227-273 2-40 (55)
26 2xl1_A Arginine attenuator pep 43.2 12 0.0004 19.0 1.4 19 252-270 6-24 (26)
27 2xt6_A 2-oxoglutarate decarbox 36.1 21 0.00073 36.9 3.3 29 154-182 192-220 (1113)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=1.3e-58 Score=437.44 Aligned_cols=278 Identities=24% Similarity=0.375 Sum_probs=225.6
Q ss_pred CceEEEeeeEeeCCCCCCCCCceeecCcCccccccCCccEEEEecCCCCCCCcccchhhhHHHHHHHHHHHHhhhccccc
Q 045056 1 MEVEIISRECIKPSSPTPLHLKTYKFSLLDQFRNHIFAPRVLYYPLINLSDASVIDHIVSKRLQLLKQSLSETLVRFYPL 80 (299)
Q Consensus 1 ~~v~i~~~~~V~P~~~~~~~~~~~~LS~lD~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~L 80 (299)
|+|+|+++++|+|+.|++. +.++||+||+.+++.|++.+|||+.+... . ...+++||+||+++|++||||
T Consensus 6 ~~V~i~~~~~V~P~~~tp~--~~~~LS~lD~~~~~~~~~~~~~y~~~~~~-----~---~~~~~~Lk~sLs~~L~~f~pl 75 (439)
T 4g22_A 6 MKIEVKESTMVRPAQETPG--RNLWNSNVDLVVPNFHTPSVYFYRPTGSS-----N---FFDAKVLKDALSRALVPFYPM 75 (439)
T ss_dssp CCEEEEEEEEECCSSCCCC--CEECCCHHHHSCCTTCCCEEEEECCCSCT-----T---TTCHHHHHHHHHHHTTTTGGG
T ss_pred eEEEEeeeEEEeCCCCCCC--CeecCChhHhCccccceeeEEEEcCCCCc-----c---ccHHHHHHHHHHHHHhhcccc
Confidence 6899999999999999875 56999999998888999999999975432 1 345899999999999999999
Q ss_pred ceeec----CCceEecCCCCeeEEEEEEcCChhhhcCCCCcccccccccCCCCCCccccccCcce-eEEEEEEecCCeEE
Q 045056 81 AGKMT----ENFSINCNDEGIYFVEARAKSPLNEFLNKPDPSLTHKFFPVEGSESLTGRIAGAHV-AKVQITSFPCGGLV 155 (299)
Q Consensus 81 aGrl~----~~~~i~~~~~gv~f~~a~~~~~~~dl~~~p~~~~~~~l~p~~~~~~~~g~~~~~~P-l~vQvt~f~cGG~~ 155 (299)
||||+ ++++|+||++||.|+||+++++++|+........+++|+|........ .+.| +.||||+|+|||++
T Consensus 76 AGRl~~~~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~p~~~~~~l~p~~~~~~~~----~~~pll~vQvT~f~cGG~~ 151 (439)
T 4g22_A 76 AGRLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRRLIPAVDYSQGI----SSYALLVLQVTYFKCGGVS 151 (439)
T ss_dssp GCEEEECTTSCEEEECCCCCEEEEEEEESSCGGGGTTCCCCGGGGGGSCCCCTTSCT----TSSCSEEEEEEECTTSCEE
T ss_pred ceeeeeCCCCCEEEEECCCCCEEEEEEcCCcHHHhcCCCCCHHHHhcCCCCCccccc----ccCceeEEEEEEecCCCEE
Confidence 99997 479999999999999999999999997632233567788865432222 4678 99999999999999
Q ss_pred EEeeecceecchhhHHHHHHHHHHHHhcCCCCCCccCCCcCCccccCCCCCCcCc---cccccccc---cc----ccC-C
Q 045056 156 ICSCFSHMFGDGTSFSLFMKSWAATARKSNTGAAVMCPNFDASILFPPNEAYPRE---LNWNSLFT---RF----FET-G 224 (299)
Q Consensus 156 lg~~~~H~v~Dg~~~~~fl~~Wa~~~rg~~~~~~~~~P~~dr~~l~~~~~~p~~~---~~~~~~~~---~~----~~~-~ 224 (299)
||+++||.++||.|+.+||++||++|||.. ...+|++||+.+.+ +++|... .++...+. .. ... .
T Consensus 152 lg~~~~H~v~Dg~~~~~Fl~~wa~~~rg~~---~~~~P~~dr~~l~~-~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (439)
T 4g22_A 152 LGVGMRHHAADGFSGLHFINSWSDMARGLD---VTLPPFIDRTLLRA-RDPPQPQFQHIEYQPPPALAVSPQTAASDSVP 227 (439)
T ss_dssp EEEEECTTTCCHHHHHHHHHHHHHHHTTCC---CSSCCBCCGGGGCC-CSSCCCSSCCGGGSCCC---------------
T ss_pred EEEEeeeccCcHHHHHHHHHHHHHHhCCCC---CCCCCccccccccC-CCCCCCCcCcccccCCCCCcccccccccCCcc
Confidence 999999999999999999999999999975 35689999986642 3332211 11111110 00 111 5
Q ss_pred CeEEEEEEEcHHHHHHHHHHhhhcCC-CCCCceehhhHHHHHHHHHhhccCCCCCCCceEEEEEecCCCCCCCCCC
Q 045056 225 RFVMRRFVFDAKAIADLKAKAIISSC-VQNPTRVEVVSALLSKHIMATFKLKSGPHKPTLLTHVVNLRPKARPPLP 299 (299)
Q Consensus 225 ~~~~~~f~~s~~~l~~Lk~~a~~~~~-~~~~St~dal~A~~W~~~~rar~~~~~~~~~~~l~~~vd~R~rl~pplP 299 (299)
++++++|+|++++|++||+++. ++. ..++||||+|+||+|+|++|||...+ ++.+++.++||+|+|++||||
T Consensus 228 ~~~~~~f~fs~~~i~~LK~~a~-~~~~~~~~St~dal~A~iWr~~~rAr~~~~--~~~~~l~~~vd~R~rl~Pplp 300 (439)
T 4g22_A 228 ETAVSIFKLTREQISALKAKSK-EDGNTISYSSYEMLAGHVWRCACKARGLEV--DQGTKLYIATDGRARLRPSLP 300 (439)
T ss_dssp CEEEEEEEECHHHHHHHHHGGG-GGGCCCCCCHHHHHHHHHHHHHHHHTTCCT--TCEEEEEEEEECTTTSSSCCC
T ss_pred cceEEEEEECHHHHHHHHHHhh-ccCCCCCccHHHHHHHHHHHHHHHhcCCCC--CCcEEEEEEEcccCCCCCCCC
Confidence 7899999999999999999998 542 46799999999999999999998644 578999999999999999997
No 2
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=2.7e-58 Score=433.17 Aligned_cols=279 Identities=38% Similarity=0.611 Sum_probs=230.3
Q ss_pred CceEEEeeeEeeCCCCCCCCCceeecCcCccccccCCccEEEEecCCCCCCCcccchhhhHHHHHHHHHHHHhhhccccc
Q 045056 1 MEVEIISRECIKPSSPTPLHLKTYKFSLLDQFRNHIFAPRVLYYPLINLSDASVIDHIVSKRLQLLKQSLSETLVRFYPL 80 (299)
Q Consensus 1 ~~v~i~~~~~V~P~~~~~~~~~~~~LS~lD~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~L 80 (299)
|+|+|+++++|+|+.||+.+.+.++||+||+.+++.|++.+|||+.++... ++. ...+++||+||+++|++||||
T Consensus 3 m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~~--~~~---~~~~~~Lk~sLs~~L~~~~pl 77 (421)
T 2bgh_A 3 PQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSN--LDP---AQTSQHLKQSLSKVLTHFYPL 77 (421)
T ss_dssp -CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTSCSSEEEEEEEECCCSSCC--CCH---HHHHHHHHHHHHHHTTTSGGG
T ss_pred ceEEEeeeEEEeCCCCCCCCCcccCCChHHhcccccccceEEEEeCCCccc--cch---hhHHHHHHHHHHHHhhhcchh
Confidence 689999999999999988766789999999987789999999999754310 123 578999999999999999999
Q ss_pred ceeecCCceEecCCCCeeEEEEEEcCChhhhcCC-CCcccccccccCCCCCCccccc-cCcce-eEEEEEEecCCeEEEE
Q 045056 81 AGKMTENFSINCNDEGIYFVEARAKSPLNEFLNK-PDPSLTHKFFPVEGSESLTGRI-AGAHV-AKVQITSFPCGGLVIC 157 (299)
Q Consensus 81 aGrl~~~~~i~~~~~gv~f~~a~~~~~~~dl~~~-p~~~~~~~l~p~~~~~~~~g~~-~~~~P-l~vQvt~f~cGG~~lg 157 (299)
||||+++++|+||++||.|++|+++++++|+... |+...++.|+|... ... ++. ..+.| +.+|||+|+|||++||
T Consensus 78 AGRl~~~~~i~c~~~Gv~fv~A~~d~~l~~~~~~~p~~~~~~~l~p~~~-~~~-~~~~~~~~pll~vQvt~f~cgG~~lg 155 (421)
T 2bgh_A 78 AGRINVNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPSAA-YPG-GKIEVNEDVPLAVKISFFECGGTAIG 155 (421)
T ss_dssp GSEEETTTEEECCCCCEEEEEEEESSCHHHHHSCCSSGGGGGGGSSSCS-SSS-SSSCCCTTCSEEEEEEECTTSCEEEE
T ss_pred ccccCCCcEEEEcCCceEEEEEEEcCCHHHHhccCCChHHHHhcCCCCC-Ccc-ccccccCCceEEEEEEEEcCCCEEEE
Confidence 9999988999999999999999999999999875 65556678888662 211 000 14678 9999999999999999
Q ss_pred eeecceecchhhHHHHHHHHHHHHhcCCCCCCccCCCcCC-ccccCC-CCCCcCcccccccccccccCCCeEEEEEEEcH
Q 045056 158 SCFSHMFGDGTSFSLFMKSWAATARKSNTGAAVMCPNFDA-SILFPP-NEAYPRELNWNSLFTRFFETGRFVMRRFVFDA 235 (299)
Q Consensus 158 ~~~~H~v~Dg~~~~~fl~~Wa~~~rg~~~~~~~~~P~~dr-~~l~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~f~~s~ 235 (299)
+++||.++||.|+.+|+++||++|||.. .. ..|.+|| +.+.++ ++.|. + .+....++.+++|+|++
T Consensus 156 ~~~~H~v~Dg~~~~~fl~~wa~~~rg~~--~~-~~P~~dr~~~l~p~~~~~~~--~-------~~~~~~~~~~~~f~f~~ 223 (421)
T 2bgh_A 156 VNLSHKIADVLSLATFLNAWTATCRGET--EI-VLPNFDLAARHFPPVDNTPS--P-------ELVPDENVVMKRFVFDK 223 (421)
T ss_dssp EEEETTTCCHHHHHHHHHHHHHHHTTCS--CC-CCCBCSHHHHHSCCCTTCCC--C-------CCCCCSSEEEEEEEECH
T ss_pred EEeeEEechHHHHHHHHHHHHHHhcCCC--CC-CCCccccccccCCCcccCCC--C-------ccCCccceEEEEEEECH
Confidence 9999999999999999999999999975 23 6789999 777655 44443 1 11234578999999999
Q ss_pred HHHHHHHHHhhhcCCC-CCCceehhhHHHHHHHHHhhccCCCCCCCceEEEEEecCCCCCCCCCC
Q 045056 236 KAIADLKAKAIISSCV-QNPTRVEVVSALLSKHIMATFKLKSGPHKPTLLTHVVNLRPKARPPLP 299 (299)
Q Consensus 236 ~~l~~Lk~~a~~~~~~-~~~St~dal~A~~W~~~~rar~~~~~~~~~~~l~~~vd~R~rl~pplP 299 (299)
++|++||+.+. ++.. .++|+||+|+||+|+|++|||....+.++.+++.++||+|+|++||||
T Consensus 224 ~~i~~LK~~a~-~~~~~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP 287 (421)
T 2bgh_A 224 EKIGALRAQAS-SASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLP 287 (421)
T ss_dssp HHHHHHHHHTC------CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEESGGGSSSCCC
T ss_pred HHHHHHHHHhh-ccCCCCCCchhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecCccccCCCCC
Confidence 99999999997 5432 679999999999999999998753333578999999999999999997
No 3
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=9.6e-54 Score=405.73 Aligned_cols=289 Identities=19% Similarity=0.233 Sum_probs=221.1
Q ss_pred eEEEeeeEeeCCCCCCCCCceeecCcCccccc-cCCccEEEEecCCCCCCCcccchhhhHHHHHHHHHHHHhhhcccccc
Q 045056 3 VEIISRECIKPSSPTPLHLKTYKFSLLDQFRN-HIFAPRVLYYPLINLSDASVIDHIVSKRLQLLKQSLSETLVRFYPLA 81 (299)
Q Consensus 3 v~i~~~~~V~P~~~~~~~~~~~~LS~lD~~~~-~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~La 81 (299)
|+|+++++|+|+.++++ .+.++||+||+.+. ..|++.+|||+.+.... ... +.++++||+||+++|++|||||
T Consensus 2 v~v~~~~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~--~~~---~~~~~~Lk~sLs~~L~~~~plA 75 (453)
T 2xr7_A 2 ASVIEQCQVVPSPGSAT-ELTLPLTYFDHVWLAFHRMRRILFYKLPISRP--DFV---QTIIPTLKDSLSLTLKYYLPLA 75 (453)
T ss_dssp CEEEEESCCCCCTTCCS-EEEEECCHHHHGGGGSCCEEEEEEEECCCCSH--HHH---HTHHHHHHHHHHHHHTTSGGGG
T ss_pred eEEEEEEEecCCCCCCC-CceECCCHHHhhhhhcCCccEEEEEeCCCCCc--hhH---HHHHHHHHHHHHHHhhhccccC
Confidence 89999999999987543 47899999999754 46999999999764310 002 4579999999999999999999
Q ss_pred eeec------CCceEecC-CCCeeEEEEEEcCChhhhcCC--CCcccccccccCCCCCCccccccCcce-eEEEEEEecC
Q 045056 82 GKMT------ENFSINCN-DEGIYFVEARAKSPLNEFLNK--PDPSLTHKFFPVEGSESLTGRIAGAHV-AKVQITSFPC 151 (299)
Q Consensus 82 Grl~------~~~~i~~~-~~gv~f~~a~~~~~~~dl~~~--p~~~~~~~l~p~~~~~~~~g~~~~~~P-l~vQvt~f~c 151 (299)
|||+ ++++|+|+ ++||.|+||+++.+++|+... ++...++.|+|...... .+....+.| +.+|||+|+|
T Consensus 76 GRl~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~-~~~~~~~~pll~vQvT~f~c 154 (453)
T 2xr7_A 76 GNVACPQDWSGYPELRYVTGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEPK-DAPGVQLAPVLAIQVTLFPN 154 (453)
T ss_dssp SCCEEESSTTCCCEEEEETTCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCCE-EETTEEECCCEEEEEEEETT
T ss_pred eeEEccCCCCCCEEEEecCCCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCcc-cccccccCCeEEEEEEEccC
Confidence 9995 37999999 599999999999999999752 23445577887654221 100002378 9999999999
Q ss_pred CeEEEEeeecceecchhhHHHHHHHHHHHHh-cCCC--CCCccCCCcCCccccCCCCCCc-Ccccccccccc-c----cc
Q 045056 152 GGLVICSCFSHMFGDGTSFSLFMKSWAATAR-KSNT--GAAVMCPNFDASILFPPNEAYP-RELNWNSLFTR-F----FE 222 (299)
Q Consensus 152 GG~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~r-g~~~--~~~~~~P~~dr~~l~~~~~~p~-~~~~~~~~~~~-~----~~ 222 (299)
||++||+++||.++||.|+.+||++||++|| |... ......|.+||+.+.+|.+++. +...+...+.. . ..
T Consensus 155 GG~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~~~~~~~~P~~dr~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (453)
T 2xr7_A 155 HGISIGFTNHHVAGDGATIVKFVRAWALLNKFGGDEQFLANEFIPFYDRSVIKDPNGVGMSIWNEMKKYKHMMKMSDVVT 234 (453)
T ss_dssp TEEEEEEEECTTTCCSHHHHHHHHHHHHHHHTTTCGGGSCGGGSCBCCCSSSCCSSCHHHHTTTTGGGCTTTSCCSCCCC
T ss_pred CcEEEEEeeeeeeechhHHHHHHHHHHHHhhcCCCcccCCCCCCCccccccccCCCCcchHHHHhccccCCccccccccC
Confidence 9999999999999999999999999999999 7621 0234578999988765432210 00111000110 0 12
Q ss_pred CCCeEEEEEEEcHHHHHHHHHHhhhcCCC--CCCceehhhHHHHHHHHHhhccCC--C-CCCCceEEEEEecCCCCCCCC
Q 045056 223 TGRFVMRRFVFDAKAIADLKAKAIISSCV--QNPTRVEVVSALLSKHIMATFKLK--S-GPHKPTLLTHVVNLRPKARPP 297 (299)
Q Consensus 223 ~~~~~~~~f~~s~~~l~~Lk~~a~~~~~~--~~~St~dal~A~~W~~~~rar~~~--~-~~~~~~~l~~~vd~R~rl~pp 297 (299)
..+.++++|+|++++|++||+.+. ++.. .++|+||+|+||+|+|++|||... . ++++.+++.++||+|+|++||
T Consensus 235 ~~~~~~~~f~f~~~~i~~Lk~~a~-~~~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~vd~R~rl~pp 313 (453)
T 2xr7_A 235 PPDKVRGTFIITRHDIGKLKNLVL-TRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCAADCRAQFNPP 313 (453)
T ss_dssp CCSCCCEEEEECHHHHHHHHHHHH-HHSCCCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEECCTTSCSSSC
T ss_pred CCCceEEEEEECHHHHHHHHHHHh-hcCCCCCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEEecccccCCCC
Confidence 345778999999999999999997 4332 579999999999999999999752 1 235789999999999999999
Q ss_pred CC
Q 045056 298 LP 299 (299)
Q Consensus 298 lP 299 (299)
||
T Consensus 314 lP 315 (453)
T 2xr7_A 314 LP 315 (453)
T ss_dssp CC
T ss_pred CC
Confidence 97
No 4
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=1.9e-52 Score=396.98 Aligned_cols=283 Identities=21% Similarity=0.284 Sum_probs=216.4
Q ss_pred ceEEEeeeEeeCCCCCCCCCceeecCcCccccc-cCCccEEEEecCCCCCCCcccchhhhHHHHHHHHHHHHhhhccccc
Q 045056 2 EVEIISRECIKPSSPTPLHLKTYKFSLLDQFRN-HIFAPRVLYYPLINLSDASVIDHIVSKRLQLLKQSLSETLVRFYPL 80 (299)
Q Consensus 2 ~v~i~~~~~V~P~~~~~~~~~~~~LS~lD~~~~-~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~L 80 (299)
+|+|+++++|+|+.++++ .+.++||+||+.+. ..|++.+|||+.++... ... +..+++||+||+++|++||||
T Consensus 6 ~v~v~~~~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~--~~~---~~~~~~Lk~sLs~~L~~~~pl 79 (454)
T 2e1v_A 6 ILTVLEQSQVSPPPDTLG-DKSLQLTFFDFFWLRSPPINNLFFYELPITRS--QFT---ETVVPNIKHSLSITLKHFYPF 79 (454)
T ss_dssp CEEEEEEEEECCCTTSCC-CEEEECCHHHHTTTTCCCEEEEEEEECCCCHH--HHH---HTHHHHHHHHHHHHHTTCGGG
T ss_pred eEEEEEEEEEeCCCCCCC-CceecCchHHhhhhccCCccEEEEEeCCCCcc--hhh---HHHHHHHHHHHHHHhhhcccc
Confidence 599999999999987543 47899999999754 56999999999754210 002 457999999999999999999
Q ss_pred ceeec--C----CceEecC-CCCeeEEEEEEcCChhhhcCC-C-CcccccccccCCCCCCccccccCcce-eEEEEEEec
Q 045056 81 AGKMT--E----NFSINCN-DEGIYFVEARAKSPLNEFLNK-P-DPSLTHKFFPVEGSESLTGRIAGAHV-AKVQITSFP 150 (299)
Q Consensus 81 aGrl~--~----~~~i~~~-~~gv~f~~a~~~~~~~dl~~~-p-~~~~~~~l~p~~~~~~~~g~~~~~~P-l~vQvt~f~ 150 (299)
||||+ + +++|+|+ ++||.|+||+++.+++|+... + +...++.|+|........ ....+.| +.+|||+|+
T Consensus 80 AGRl~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~-~~~~~~pll~vQvT~f~ 158 (454)
T 2e1v_A 80 VGKLVVYPAPTKKPEICYVEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRL-SDCIKIPLFSVQVTLFP 158 (454)
T ss_dssp GSEEEECSSSSSCCEEEECTTCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCCCCCEEC-SSCEEEECEEEEEEEET
T ss_pred ceeeeeccCCCCCEEEEECCCCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCCCCcccc-cccccCceEEEEEEEec
Confidence 99997 2 7999999 599999999999999999753 2 233457788865422110 0003458 999999999
Q ss_pred CCeEEEEeeecceecchhhHHHHHHHHHHHHh-cCC-C--CCCccCCCcCCccccCCCCCC-cCccccccc-------cc
Q 045056 151 CGGLVICSCFSHMFGDGTSFSLFMKSWAATAR-KSN-T--GAAVMCPNFDASILFPPNEAY-PRELNWNSL-------FT 218 (299)
Q Consensus 151 cGG~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~r-g~~-~--~~~~~~P~~dr~~l~~~~~~p-~~~~~~~~~-------~~ 218 (299)
|||++||+++||.++||.|+.+|+++||++|| |.. . ......|.+|| .+..|. +. .+...+... +.
T Consensus 159 cgG~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~~~~~~~~~P~~dr-~l~~p~-~~~~~~~~~~~~~~~~~~~~~ 236 (454)
T 2e1v_A 159 NQGIAIGITNHHCLGDASTRFCFLKAWTSIARSGNNDESFLANGTRPLYDR-IIKYPM-LDEAYLKRAKVESFNEDYVTQ 236 (454)
T ss_dssp TTEEEEEEEECGGGCCHHHHHHHHHHHHHHHHTTSCCHHHHHHSCCCBCCC-CCCCHH-HHHHHHHHTTCTTHHHHCCCC
T ss_pred CCcEEEEEEeeeeecchhHHHHHHHHHHHHhccCCCccccCCCCCCCcccc-cCCCCC-cchHHHHhhhccccccccCcc
Confidence 99999999999999999999999999999999 752 0 01135789999 554221 00 000001000 00
Q ss_pred ccccCCCeEEEEEEEcHHHHHHHHHHhhhcCCC--CCCceehhhHHHHHHHHHhhccCCCCCCCceEEEEEecCCCCCCC
Q 045056 219 RFFETGRFVMRRFVFDAKAIADLKAKAIISSCV--QNPTRVEVVSALLSKHIMATFKLKSGPHKPTLLTHVVNLRPKARP 296 (299)
Q Consensus 219 ~~~~~~~~~~~~f~~s~~~l~~Lk~~a~~~~~~--~~~St~dal~A~~W~~~~rar~~~~~~~~~~~l~~~vd~R~rl~p 296 (299)
......+.++++|+|++++|++||+++. ++.. .++|+||+|+||+|+|++||| + ++.+++.++||+|+|++|
T Consensus 237 ~~~~~~~~~~~~f~f~~~~i~~LK~~a~-~~~~~~~~~St~d~l~A~lWr~~~~Ar---~--~~~~~l~~~vd~R~rl~p 310 (454)
T 2e1v_A 237 SLAGPSDKLRATFILTRAVINQLKDRVL-AQLPTLEYVSSFTVACAYIWSCIAKSR---N--DKLQLFGFPIDRRARMKP 310 (454)
T ss_dssp CCCCCCCEEEEEEEECHHHHHHHHHHHH-HHCTTCSCCCHHHHHHHHHHHHHHHHH---C--CSEEEEEEEEECGGGSSS
T ss_pred cCCCCCCceEEEEEECHHHHHHHHHHHh-hcCCCCCcccHHHHHHHHHHHHHhhhc---C--CCceEEEEEecchhccCC
Confidence 0012356789999999999999999997 4332 579999999999999999999 2 578999999999999999
Q ss_pred CCC
Q 045056 297 PLP 299 (299)
Q Consensus 297 plP 299 (299)
|||
T Consensus 311 plP 313 (454)
T 2e1v_A 311 PIP 313 (454)
T ss_dssp CCC
T ss_pred CCC
Confidence 997
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=3.9e-43 Score=332.61 Aligned_cols=264 Identities=16% Similarity=0.120 Sum_probs=188.6
Q ss_pred eecCcCcccc--ccCCccEEEEecCCCCCCCcccchhhhHHHHHHHHHHHHhhhcccccceeec---------CCceEec
Q 045056 24 YKFSLLDQFR--NHIFAPRVLYYPLINLSDASVIDHIVSKRLQLLKQSLSETLVRFYPLAGKMT---------ENFSINC 92 (299)
Q Consensus 24 ~~LS~lD~~~--~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~---------~~~~i~~ 92 (299)
++||.|||.+ ++.|++.+|||+.++.. +. +.++++||+||+++|++||||||||+ ++++|+|
T Consensus 5 ~~Ls~lD~~~~~~~~y~~~~~~y~~~~~~----~~---~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~ 77 (451)
T 2rkv_A 5 IQLDTLGQLPGLLSIYTQISLLYPVSDSS----QY---PTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVP 77 (451)
T ss_dssp EECCGGGGCTTGGGCEEEEEEEEECSCGG----GH---HHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEEC
T ss_pred ccCChhhcCccccccceeEEEEEECCCCC----CH---HHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEee
Confidence 6999999987 68999999999964321 23 56899999999999999999999996 1478888
Q ss_pred CCCCeeEEEEEEcC-----ChhhhcC--CCCccccc--ccccCCCCCCcccc-ccCcce-eEEEEEEecCCeEEEEeeec
Q 045056 93 NDEGIYFVEARAKS-----PLNEFLN--KPDPSLTH--KFFPVEGSESLTGR-IAGAHV-AKVQITSFPCGGLVICSCFS 161 (299)
Q Consensus 93 ~~~gv~f~~a~~~~-----~~~dl~~--~p~~~~~~--~l~p~~~~~~~~g~-~~~~~P-l~vQvt~f~cGG~~lg~~~~ 161 (299)
++.++.|++++++. ++++|.. .|.. .+. .+.|........++ ...+.| +.+|||+| |||++||+++|
T Consensus 78 ~~~~~~~~va~~~~d~~~p~~~~l~~~~~p~~-~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~~-~GG~~lg~~~~ 155 (451)
T 2rkv_A 78 FEDVPRVVVKDLRDDPSAPTIEGMRKAGYPMA-MFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNFI-KGGLILTVNGQ 155 (451)
T ss_dssp CCSSCEEEEEECTTCTTSCBHHHHHHHTSCGG-GSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEEE-BTEEEEEEEEE
T ss_pred cCCCCeEEEEeCCCCCCCCCHHHHHHcCCChh-hcCHhhcCCcccCCCCcccCCCCCCceEEEEEEEe-cCceeeeeeeh
Confidence 77666799988865 6777753 2321 121 23343211100000 014578 99999965 79999999999
Q ss_pred ceecchhhHHHHHHHHHHHHhcCCCCC-CccCCCcCCccccCCC--CCCc--Cc-cccccccc---ccccCCCeEEEEEE
Q 045056 162 HMFGDGTSFSLFMKSWAATARKSNTGA-AVMCPNFDASILFPPN--EAYP--RE-LNWNSLFT---RFFETGRFVMRRFV 232 (299)
Q Consensus 162 H~v~Dg~~~~~fl~~Wa~~~rg~~~~~-~~~~P~~dr~~l~~~~--~~p~--~~-~~~~~~~~---~~~~~~~~~~~~f~ 232 (299)
|.++||.|+.+||++||++|||...+. ....|++||+.+.+.. ..|. +. +.+...+. ......++.+++|+
T Consensus 156 H~v~Dg~g~~~Fl~awa~~~rg~~~~~~~~~~p~~dr~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 235 (451)
T 2rkv_A 156 HGAMDMVGQDAVIRLLSKACRNDPFTEEEMTAMNLDRKTIVPYLENYTIGPEVDHQIVKADVAGGDAVLTPVSASWAFFT 235 (451)
T ss_dssp TTTCCHHHHHHHHHHHHHHHHTCCCCHHHHHHTTCCSTTSSCCCTTCCCCGGGTTCBCCTTSCC-------CCEEEEEEE
T ss_pred hccccHHHHHHHHHHHHHHhcCCCCCccccccccCchhhccccccccCCCccccccccCCCCCCCCCCCCCCCceEEEEE
Confidence 999999999999999999999964100 1135889997655421 1221 11 11111111 11234568899999
Q ss_pred EcHHHHHHHHHHhhhcCC---CCCCceehhhHHHHHHHHHhhccCCCCCCCceEEEEEecCCCCCCCC
Q 045056 233 FDAKAIADLKAKAIISSC---VQNPTRVEVVSALLSKHIMATFKLKSGPHKPTLLTHVVNLRPKARPP 297 (299)
Q Consensus 233 ~s~~~l~~Lk~~a~~~~~---~~~~St~dal~A~~W~~~~rar~~~~~~~~~~~l~~~vd~R~rl~pp 297 (299)
|++++|++||+++. ++. ..++||||+|+||+|+|++|||....++++.+++.++||+|+|+++|
T Consensus 236 f~~~~i~~LK~~a~-~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~lP 302 (451)
T 2rkv_A 236 FSPKAMSELKDAAT-KTLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAMGVS 302 (451)
T ss_dssp ECHHHHHHHHHHHH-TTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEEEECHHHHTCC
T ss_pred ECHHHHHHHHHHHh-hhccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEEecccccCCCC
Confidence 99999999999998 542 35799999999999999999982112236789999999999999844
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=98.57 E-value=7.4e-06 Score=75.35 Aligned_cols=238 Identities=14% Similarity=0.073 Sum_probs=131.5
Q ss_pred ceeecCcCccccc-cCCccEEEEecCCCCCCCcccchhhhHHHHHHHHHHHHhhhcccccceeec---CC-ceEecCCCC
Q 045056 22 KTYKFSLLDQFRN-HIFAPRVLYYPLINLSDASVIDHIVSKRLQLLKQSLSETLVRFYPLAGKMT---EN-FSINCNDEG 96 (299)
Q Consensus 22 ~~~~LS~lD~~~~-~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~---~~-~~i~~~~~g 96 (299)
..+|||++.+.+. ..| ...+.|...... ..+.|+++|.+++..+|.|-.++. +. ..+......
T Consensus 6 ~~~pls~~Q~~~~~~~y-~~~~~~~l~g~l-----------d~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~ 73 (422)
T 1q9j_A 6 VIRKLSHSEEVFAQYEV-FTSMTIQLRGVI-----------DVDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLL 73 (422)
T ss_dssp EEEECCHHHHHHHHTTC-EEEEEEEEESCC-----------CHHHHHHHHHHHHHHCGGGSEEEEECTTSSEEEEECCSS
T ss_pred eeecCCHHHHHHHhcCc-eEEEEEEEecCC-----------CHHHHHHHHHHHHHhCccceEEEEecCCcceeeeccCCC
Confidence 5689999987542 223 233334443321 277999999999999999988874 11 111111111
Q ss_pred ee-EEEEEEcCChhhhcCCCCcccccccccCCCCCCccccccCcce-eEEEEEEecCCeEEEEeeecceecchhhHHHHH
Q 045056 97 IY-FVEARAKSPLNEFLNKPDPSLTHKFFPVEGSESLTGRIAGAHV-AKVQITSFPCGGLVICSCFSHMFGDGTSFSLFM 174 (299)
Q Consensus 97 v~-f~~a~~~~~~~dl~~~p~~~~~~~l~p~~~~~~~~g~~~~~~P-l~vQvt~f~cGG~~lg~~~~H~v~Dg~~~~~fl 174 (299)
.. +. ..|+........... .. ...+ ...| +.+.+.. ..++..|.+.+||.++||.|+..|+
T Consensus 74 ~~~~~-------~~d~~~~~~~~~~~~---~~--~~~d----~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~ 136 (422)
T 1q9j_A 74 HSGIC-------VIDGTAATNGSPSGN---AE--LRLD----QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLV 136 (422)
T ss_dssp SCCCE-------EEC---------------CC--CCCC----TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHH
T ss_pred CCceE-------EEECCCCCcchhhhc---cc--CccC----CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHH
Confidence 11 11 111111000000000 00 0011 2356 8887777 6788999999999999999999999
Q ss_pred HHHHHHHhc----CCCCCCccC--CCcCC-------ccccC--CCCCCcC-cccccc-------ccc--ccccCCCeEEE
Q 045056 175 KSWAATARK----SNTGAAVMC--PNFDA-------SILFP--PNEAYPR-ELNWNS-------LFT--RFFETGRFVMR 229 (299)
Q Consensus 175 ~~Wa~~~rg----~~~~~~~~~--P~~dr-------~~l~~--~~~~p~~-~~~~~~-------~~~--~~~~~~~~~~~ 229 (299)
+.|.+..++ +. ....+ +..+- ..... ....... ..-|.. .|. +..........
T Consensus 137 ~~l~~~Y~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~lp~~~~~~~~~~~~~~ 214 (422)
T 1q9j_A 137 DELFSRYTDAVTTGD--PGPITPQPTPLSMEAVLAQRGIRKQGLSGAERFMSVMYAYEIPATETPAVLAHPGLPQAVPVT 214 (422)
T ss_dssp HHHHHHHHHHHHSSS--CCCCCCCCCCBCHHHHHHHSSCCC-----CTTSSTTTTCC-------------CCSBCCCCEE
T ss_pred HHHHHHHHHhhccCC--CCCCCCCCCCCCHHHHHHhcCCcccccchhhhhhhhhhcccCCCcccCCCCCCCCCCCCccce
Confidence 999998862 22 11111 11110 00000 0000000 000111 010 00111223567
Q ss_pred EEEEcHHHHHHHHHHhhhcCCCCCCceehhhHHHHHHHHHhhccCCCCCCCceEEEEEecCCCCCCCC
Q 045056 230 RFVFDAKAIADLKAKAIISSCVQNPTRVEVVSALLSKHIMATFKLKSGPHKPTLLTHVVNLRPKARPP 297 (299)
Q Consensus 230 ~f~~s~~~l~~Lk~~a~~~~~~~~~St~dal~A~~W~~~~rar~~~~~~~~~~~l~~~vd~R~rl~pp 297 (299)
.+.++.+..++|++.|. . ..+|.+.++.|.+-..+.|-+.. . .....+..++++|....||
T Consensus 215 ~~~l~~~~~~~l~~~a~-~---~~~t~~~~l~aa~~~~l~r~~~~-~--~~~v~~g~~~~~R~~~~~~ 275 (422)
T 1q9j_A 215 RLWLSKQQTSDLMAFGR-E---HRLSLNAVVAAAILLTEWQLRNT-P--HVPIPYVYPVDLRFVLAPP 275 (422)
T ss_dssp EECCCHHHHHHHHHHHT-T---TTCCHHHHHHHHHHHHHHHHHTC-S--SCCEEEEEEEETTTTSSSC
T ss_pred EEEeCHHHHHHHHHHHH-H---hCCCHHHHHHHHHHHHHHhcccC-C--CceEEEeeeeecccccCCC
Confidence 88899999999999987 4 35888999988877777765221 1 3567899999999986544
No 7
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=97.74 E-value=0.003 Score=59.71 Aligned_cols=203 Identities=9% Similarity=0.011 Sum_probs=115.7
Q ss_pred HHHHHHHHHHhhhcccccceeec--C-C-ceEecCCCCeeEEEEEEcCChhhhcCCCCcccccccccCCCCCCccccccC
Q 045056 63 LQLLKQSLSETLVRFYPLAGKMT--E-N-FSINCNDEGIYFVEARAKSPLNEFLNKPDPSLTHKFFPVEGSESLTGRIAG 138 (299)
Q Consensus 63 ~~~L~~sL~~~L~~~p~LaGrl~--~-~-~~i~~~~~gv~f~~a~~~~~~~dl~~~p~~~~~~~l~p~~~~~~~~g~~~~ 138 (299)
.+.|++++.+++..++.|--++. + . ..+......+.+... +.+-+++.. ..+.+ -. .. +. .
T Consensus 133 ~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~~~~~~--~~~~~~~~~-----~~~~~-~~-~f--dl----~ 197 (520)
T 2jgp_A 133 RTRVEAAFQRLIARHESLRTSFAVVNGEPVQNIHEDVPFALAYS--EVTEEEARE-----LVSSL-VQ-PF--DL----E 197 (520)
T ss_dssp HHHHHHHHHHHHHHCGGGGEEEEEETTEEEEEECSCCCCCCEEE--ECCHHHHHH-----HHHHT-CC-CC--CT----T
T ss_pred HHHHHHHHHHHHHHhHhheeEEEeeCCEEEEEECCCCCCceEEE--eCCHHHHHH-----HHHHh-cC-CC--CC----C
Confidence 78999999999999999987764 1 1 111111111111111 111111110 00000 00 00 01 3
Q ss_pred cce-eEEEEEEecCCeEEEEeeecceecchhhHHHHHHHHHHHHhcCCCCCCccC-CCcC-----CccccCC--------
Q 045056 139 AHV-AKVQITSFPCGGLVICSCFSHMFGDGTSFSLFMKSWAATARKSNTGAAVMC-PNFD-----ASILFPP-------- 203 (299)
Q Consensus 139 ~~P-l~vQvt~f~cGG~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~rg~~~~~~~~~-P~~d-----r~~l~~~-------- 203 (299)
..| +.+.+-....+...|.+.+||.++||.|+..|++.+.+..++... +... +.-| +......
T Consensus 198 ~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~el~~~Y~~~~l--~~~~~~~~d~~~~~~~~~~~~~~~~~~~y 275 (520)
T 2jgp_A 198 VAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSGILLAEWVQLYQGDVL--PELRIQYKDFAVWQQEFSQSAAFHKQEAY 275 (520)
T ss_dssp SSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHHHHHHHHHHHHTTCCC--CCCSCCHHHHHHHHHHHTTSHHHHHHHHH
T ss_pred CCcceeEEEEEEcCCcEEEEEEccceeecHhHHHHHHHHHHHHHccCCC--CCCCCCHHHHHHHHHHhhcChhhHHHHHH
Confidence 356 777777666678999999999999999999999999999988531 1111 1111 1000000
Q ss_pred -----CCC-CcCc-ccccccccccccCCCeEEEEEEEcHHHHHHHHHHhhhcCCCCCCceehhhHHHHHHHHHhhccCCC
Q 045056 204 -----NEA-YPRE-LNWNSLFTRFFETGRFVMRRFVFDAKAIADLKAKAIISSCVQNPTRVEVVSALLSKHIMATFKLKS 276 (299)
Q Consensus 204 -----~~~-p~~~-~~~~~~~~~~~~~~~~~~~~f~~s~~~l~~Lk~~a~~~~~~~~~St~dal~A~~W~~~~rar~~~~ 276 (299)
.+. |... |. ..+.+...........+.++.+..++|++.|. . ..+|.+.++.|.+-..+.+--+
T Consensus 276 W~~~l~~~~~~~~lp~--~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~-~---~~~T~~~~l~aa~a~~L~~~~~--- 346 (520)
T 2jgp_A 276 WLQTFADDIPVLNLPT--DFTRPSTQSFAGDQCTIGAGKALTEGLHQLAQ-A---TGTTLYMVLLAAYNVLLAKYAG--- 346 (520)
T ss_dssp HHHHTSSCCCCCCCCC--SSCCCSSCCCBEEEEEEECCHHHHHHHHHHHH-H---HTCCHHHHHHHHHHHHHHHHHT---
T ss_pred HHHHhCCCCCcCCCCC--CCCCCCCCCCCccEEEEeCCHHHHHHHHHHHH-H---cCCCHHHHHHHHHHHHHHHhcC---
Confidence 000 0000 00 00011111223456788999999999999987 3 2478888888876666665543
Q ss_pred CCCCceEEEEEecCCCC
Q 045056 277 GPHKPTLLTHVVNLRPK 293 (299)
Q Consensus 277 ~~~~~~~l~~~vd~R~r 293 (299)
.+...++.++++|..
T Consensus 347 --~~dv~~g~~~~gR~~ 361 (520)
T 2jgp_A 347 --QEDIIVGTPITGRSH 361 (520)
T ss_dssp --CSCEEEEEEECCCCS
T ss_pred --CCCeEEEeccCCCCc
Confidence 246789999999975
No 8
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=97.61 E-value=0.0046 Score=56.79 Aligned_cols=199 Identities=12% Similarity=0.012 Sum_probs=113.8
Q ss_pred HHHHHHHHHHhhhcccccceeec--CCceEecCCCCeeEEEEEEcCChhhhcCCCCc-ccccc----cccCCCCCCcccc
Q 045056 63 LQLLKQSLSETLVRFYPLAGKMT--ENFSINCNDEGIYFVEARAKSPLNEFLNKPDP-SLTHK----FFPVEGSESLTGR 135 (299)
Q Consensus 63 ~~~L~~sL~~~L~~~p~LaGrl~--~~~~i~~~~~gv~f~~a~~~~~~~dl~~~p~~-~~~~~----l~p~~~~~~~~g~ 135 (299)
.+.|+++|.+++..++.|--++. +. .+ .....+.+.+ .|+...++. ..... ..-.+ . +.
T Consensus 35 ~~~L~~A~~~lv~rh~~LRt~f~~~~~-~v-~~~~~~~~~~-------~d~~~~~~~~~~~~~~~~~~~~~~-f--dl-- 100 (436)
T 1l5a_A 35 TTLLLRALHLTVSEIDLFRARFSAQGE-LY-WHPFSPPIDY-------QDLSIHLEAEPLAWRQIEQDLQRS-S--TL-- 100 (436)
T ss_dssp HHHHHHHHHHHHHTCGGGGEEECTTCC-EE-ECSSCCCCEE-------EECTTCTTHHHHHHHHHHHHHTSC-C--CC--
T ss_pred HHHHHHHHHHHHHHhheeEEEEEecCC-eE-CCCcCCCccE-------EeCCCCCCHHHHHHHHHHHHhcCC-C--Cc--
Confidence 78999999999999999988775 22 11 1111111111 111111110 00111 10000 0 01
Q ss_pred ccCcce-eEEEEEEecCCeEEEEeeecceecchhhHHHHHHHHHHHHh----cCCCCCCccCCCcC------CccccCCC
Q 045056 136 IAGAHV-AKVQITSFPCGGLVICSCFSHMFGDGTSFSLFMKSWAATAR----KSNTGAAVMCPNFD------ASILFPPN 204 (299)
Q Consensus 136 ~~~~~P-l~vQvt~f~cGG~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~r----g~~~~~~~~~P~~d------r~~l~~~~ 204 (299)
...| +.+.+-....+...|.+.+||.++||.|+..|++.+.+..+ |.. .....+.+. +..+....
T Consensus 101 --~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~ 176 (436)
T 1l5a_A 101 --IDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQT--PTAAFKPYQSYLEEEAAYLTSHR 176 (436)
T ss_dssp --BTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCC--CCCCCCCHHHHHHHHHHHHTSHH
T ss_pred --CCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCC--CCCCccCHHHHHHHHHHhhccHh
Confidence 2346 77777666668899999999999999999999999999886 332 111111110 00000000
Q ss_pred -------------CCCcCcccccccccc-cccCCCeEEEEEEEcHHHHHHHHHHhhhcCCCCCCceehhhHHHHHHHHHh
Q 045056 205 -------------EAYPRELNWNSLFTR-FFETGRFVMRRFVFDAKAIADLKAKAIISSCVQNPTRVEVVSALLSKHIMA 270 (299)
Q Consensus 205 -------------~~p~~~~~~~~~~~~-~~~~~~~~~~~f~~s~~~l~~Lk~~a~~~~~~~~~St~dal~A~~W~~~~r 270 (299)
+.|... ..|.. ...........+.++.+..++|++.|. . ..+|.+.++.|.+-..+.+
T Consensus 177 ~~~~~~~W~~~l~~~~~~~----~lp~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~-~---~~~t~~~~l~aa~~~~L~~ 248 (436)
T 1l5a_A 177 YWQDKQFWQGYLREAPDLT----LTSATYDPQLSHAVSLSYTLNSQLNHLLLKLAN-A---NQIGWPDALVALCALYLES 248 (436)
T ss_dssp HHHHHHHHHHHHHTSCCCC----BCCTTCCGGGCCEEEEEEECCHHHHHHHHHHHH-H---TTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCcc----cCCCCCCCCcccceeeEEecCHHHHHHHHHHHH-H---hCCCHHHHHHHHHHHHHHH
Confidence 000000 00110 011233467788999999999999987 4 3478888888876666655
Q ss_pred hccCCCCCCCceEEEEEecCCCC
Q 045056 271 TFKLKSGPHKPTLLTHVVNLRPK 293 (299)
Q Consensus 271 ar~~~~~~~~~~~l~~~vd~R~r 293 (299)
--+ +...++.++++|..
T Consensus 249 ~~g------~dv~ig~~~~~R~~ 265 (436)
T 1l5a_A 249 AEP------DAPWLWLPFMNRWG 265 (436)
T ss_dssp HST------TCCEEEEEECCCTT
T ss_pred hhC------CceEEeeecccCCC
Confidence 432 24679999999964
No 9
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=97.52 E-value=0.0016 Score=61.08 Aligned_cols=238 Identities=11% Similarity=-0.025 Sum_probs=124.4
Q ss_pred ceeecCcCcccc-------ccCCccEEEEecCCCCCCCcccchhhhHHHHHHHHHHHHhhhcccccceeec--C-CceEe
Q 045056 22 KTYKFSLLDQFR-------NHIFAPRVLYYPLINLSDASVIDHIVSKRLQLLKQSLSETLVRFYPLAGKMT--E-NFSIN 91 (299)
Q Consensus 22 ~~~~LS~lD~~~-------~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~--~-~~~i~ 91 (299)
..+|||+.-+-+ +.......+.|+..... ..+.|+++|.+++..++.|--++. + ...+.
T Consensus 12 ~~~Pls~~Q~~~~~~~~~~~~~~y~~~~~~~l~g~l-----------d~~~L~~A~~~lv~rh~~LRt~f~~~~~~~~~v 80 (493)
T 4hvm_A 12 GLRRASFLQRGAWRWLREAPPAAAFAARGLLGSGRI-----------DDDRLAAAADEVLDAFPLLRVNFVDDDGLWMRT 80 (493)
T ss_dssp CEEECCHHHHHHHHHHTTSCGGGGEEEEEEEEESSC-----------CHHHHHHHHHHHHHHCGGGGEEEEESSSEEEEE
T ss_pred CCCCCCHHHHHHHHHHhhCCCCcceeEEEEEEeCCC-----------CHHHHHHHHHHHHHhchhceeEEEccCCEEEEe
Confidence 568999876422 11112334445544322 378999999999999999987774 1 22111
Q ss_pred cCCCCeeEEEEEEcCChhhhcCCCCc-ccc----cccccCCCCCCccccccCcce-eEEEEEEecCCeEEEEeeecceec
Q 045056 92 CNDEGIYFVEARAKSPLNEFLNKPDP-SLT----HKFFPVEGSESLTGRIAGAHV-AKVQITSFPCGGLVICSCFSHMFG 165 (299)
Q Consensus 92 ~~~~gv~f~~a~~~~~~~dl~~~p~~-~~~----~~l~p~~~~~~~~g~~~~~~P-l~vQvt~f~cGG~~lg~~~~H~v~ 165 (299)
.... +.+.+.. +...++. ... ....-.+ . +. ...| +.+.+-....+...|.+.+||.++
T Consensus 81 ~~~~-~~~~~~d-------~~~~~~~~~~~~~~~~~~~~~~-f--dl----~~~pl~r~~l~~~~~~~~~l~l~~HH~i~ 145 (493)
T 4hvm_A 81 RENA-DALVRSD-------LRGHPDPQARCVELLRADRDRP-T--DP----ERDPLVRLHLVRLSETDVVLGVVAHQMLL 145 (493)
T ss_dssp CSCC-CCEEEEE-------CTTSSSHHHHHHHHHHHHHSSC-C--CT----TTSCSEEEEEEECSSSEEEEEEEEETTTC
T ss_pred cCCC-CCceEEE-------CCCCCchHHHHHHHHHHHhcCC-C--CC----CCCCeEEEEEEEECCCcEEEEEecchhhc
Confidence 1122 3332222 1111110 001 1111000 0 01 2346 788777776677899999999999
Q ss_pred chhhHHHHHHHHHHHHhcCCCCCCccCCCcCCccccCC---CCCCcCcc--c-cc----cccc---ccccCCCeEEEEEE
Q 045056 166 DGTSFSLFMKSWAATARKSNTGAAVMCPNFDASILFPP---NEAYPREL--N-WN----SLFT---RFFETGRFVMRRFV 232 (299)
Q Consensus 166 Dg~~~~~fl~~Wa~~~rg~~~~~~~~~P~~dr~~l~~~---~~~p~~~~--~-~~----~~~~---~~~~~~~~~~~~f~ 232 (299)
||.|+..|++.+.+...|.. .+ .+..|-...... ...+.... . |. +.+. ............+.
T Consensus 146 Dg~S~~~l~~~l~~~Y~g~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~l~~~~~~~~~~~~~~~~ 221 (493)
T 4hvm_A 146 DARSRYMVLGAVWQAYYGRF--RP--AQYRDFAEVADFHPLDRETVRVARHRWWSRRLPALPVRGGDGGPVGPPETSRLR 221 (493)
T ss_dssp CHHHHHHHHHHHHHHHTTCC--CG--GGSBCGGGTTTCCTTCSHHHHHHHHHHHHHHGGGSCCCC-------CCEEEEEE
T ss_pred cHHHHHHHHHHHHHHhCCCC--CC--cCHHHHHHHHhhhhcccChhhHHHHHHHHHhccCCCCCCCCCCCCCCCeeEEEE
Confidence 99999999999999997754 11 221111000000 00000000 0 11 1110 00011125677889
Q ss_pred EcHHHHHHHHHHhhhcCCCCCCc--eehhhHHHHHHHHHhhccC------CCCCCCceEEEEEecCCCC
Q 045056 233 FDAKAIADLKAKAIISSCVQNPT--RVEVVSALLSKHIMATFKL------KSGPHKPTLLTHVVNLRPK 293 (299)
Q Consensus 233 ~s~~~l~~Lk~~a~~~~~~~~~S--t~dal~A~~W~~~~rar~~------~~~~~~~~~l~~~vd~R~r 293 (299)
++.+..++|++.|. . ..+| .+.++.|.+-..+.+-+.. .........+..++++|..
T Consensus 222 l~~~~~~~l~~~a~-~---~~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~~dv~~g~~~~gR~~ 286 (493)
T 4hvm_A 222 VPGSRWQALTEPGG-P---LGGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGKDSLYLSTEVDLRDH 286 (493)
T ss_dssp EEHHHHHHHHCC----------CHHHHHHHHHHHHHHHC----------------CEEEEEEEEEHHHH
T ss_pred cCHHHHHHHHHHHH-H---cCCCchHHHHHHHHHHHHHHHhhhcccccccCcCCCCCEEEEeeccCCCC
Confidence 99999999998877 3 3477 8888888766666655110 0011356788999998854
No 10
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=96.85 E-value=0.034 Score=58.69 Aligned_cols=208 Identities=11% Similarity=0.046 Sum_probs=115.4
Q ss_pred HHHHHHHHHHhhhcccccceeec--C---CceEecCCCCeeEEEEEEcCChhhhcCCCCc---ccccccccC---CCCCC
Q 045056 63 LQLLKQSLSETLVRFYPLAGKMT--E---NFSINCNDEGIYFVEARAKSPLNEFLNKPDP---SLTHKFFPV---EGSES 131 (299)
Q Consensus 63 ~~~L~~sL~~~L~~~p~LaGrl~--~---~~~i~~~~~gv~f~~a~~~~~~~dl~~~p~~---~~~~~l~p~---~~~~~ 131 (299)
.+.|+++|.+++.+++.|--++. + ...+......+.+.+ .|+...+.. ..+..++-. .+.
T Consensus 49 ~~~l~~A~~~lv~rH~~LRt~f~~~~~~~p~Q~v~~~~~~~~~~-------~d~~~~~~~~~~~~~~~~~~~~~~~~f-- 119 (1304)
T 2vsq_A 49 IKCLEESMNVIMDRYDVFRTVFIHEKVKRPVQVVLKKRQFHIEE-------IDLTHLTGSEQTAKINEYKEQDKIRGF-- 119 (1304)
T ss_dssp HHHHHHHHHHHHHHCGGGGEEEECSSCSSCEEEEESCCCCCEEE-------EECTTSCHHHHHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHHhhhhceEEEEEcCCCeEEEEECCCCCCceEE-------EECCCCCchhHHHHHHHHHHHHhcCCC--
Confidence 78999999999999999977764 1 112222211122211 112111100 001111000 000
Q ss_pred ccccccCcce-eEEEEEEecCCeEEEEeeecceecchhhHHHHHHHHHHHHhcCCCC-CCccCC---CcCCccc-cCCC-
Q 045056 132 LTGRIAGAHV-AKVQITSFPCGGLVICSCFSHMFGDGTSFSLFMKSWAATARKSNTG-AAVMCP---NFDASIL-FPPN- 204 (299)
Q Consensus 132 ~~g~~~~~~P-l~vQvt~f~cGG~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~rg~~~~-~~~~~P---~~dr~~l-~~~~- 204 (299)
+. ...| +++.+-....+...|-+.+||.++||.|+..|++.++++.++...+ ....+| .-|-..+ ....
T Consensus 120 dl----~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~~~l~~~~~y~d~~~~~~~~~~ 195 (1304)
T 2vsq_A 120 DL----TRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQKPYSLPPVKPYKDYIKWLEKQDK 195 (1304)
T ss_dssp CT----TTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCTHHHHHHHHTSCH
T ss_pred CC----CCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCCCCCCCCcccHHHHHHHHhcchh
Confidence 01 3346 8888877777889999999999999999999999999987641100 111111 1110000 0000
Q ss_pred ------------CCCcCcccccccccccccCCCeEEEEEEEcHHHHHHHHHHhhhcCCCCCCceehhhHHHHHHHHHhhc
Q 045056 205 ------------EAYPRELNWNSLFTRFFETGRFVMRRFVFDAKAIADLKAKAIISSCVQNPTRVEVVSALLSKHIMATF 272 (299)
Q Consensus 205 ------------~~p~~~~~~~~~~~~~~~~~~~~~~~f~~s~~~l~~Lk~~a~~~~~~~~~St~dal~A~~W~~~~rar 272 (299)
+.|... .+...+.+...........|.++.+..++||+.|. .. .+|.+.++.|.+-..+.|--
T Consensus 196 ~~~~~yW~~~L~~~~~~~-~lp~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~-~~---~~T~~~vllaa~a~~L~r~t 270 (1304)
T 2vsq_A 196 QASLRYWREYLEGFEGQT-TFAEQRKKQKDGYEPKELLFSPSEAETKAFTELAK-SQ---HTTLSTALQAVWSVLISRYQ 270 (1304)
T ss_dssp HHHHHHHHHHHTTCCCCC-TTTTTCCCSSCCCCEEEEEECCCHHHHHHHHHHHH-HT---TCCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhCCCCccc-cCCCCCCccccccCcceEEEecCHHHHHHHHHHHH-Hc---CCCHHHHHHHHHHHHHHHhc
Confidence 000000 00000000111223456778899999999999998 43 47888888886666665543
Q ss_pred cCCCCCCCceEEEEEecCCCC
Q 045056 273 KLKSGPHKPTLLTHVVNLRPK 293 (299)
Q Consensus 273 ~~~~~~~~~~~l~~~vd~R~r 293 (299)
+ .+...+..++.+|..
T Consensus 271 g-----~~dvv~G~pvsgR~~ 286 (1304)
T 2vsq_A 271 Q-----SGDLAFGTVVSGRPA 286 (1304)
T ss_dssp T-----CSEEEEEEEECCCCT
T ss_pred C-----CCCEEEEEEeCCCCc
Confidence 3 246789999999976
No 11
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=96.72 E-value=0.036 Score=51.19 Aligned_cols=240 Identities=10% Similarity=0.035 Sum_probs=126.7
Q ss_pred ceeecCcCcccc-----c-cCCccEEEEecCCCCCCCcccchhhhHHHHHHHHHHHHhhhcccccceeec---CCc-eEe
Q 045056 22 KTYKFSLLDQFR-----N-HIFAPRVLYYPLINLSDASVIDHIVSKRLQLLKQSLSETLVRFYPLAGKMT---ENF-SIN 91 (299)
Q Consensus 22 ~~~~LS~lD~~~-----~-~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~---~~~-~i~ 91 (299)
..+|||+..+.+ + .......+.|...... ..+.|+++|.+++...+.|--++. +.+ .+.
T Consensus 16 ~~~pls~~Q~~~~~~~~~~~~~y~~~~~~~l~g~l-----------d~~~L~~Al~~lv~rh~~LRt~f~~~~~~~~q~v 84 (466)
T 2xhg_A 16 GNVPLTPIQKWFFGKNFTNTGHWNQSSVLYRPEGF-----------DPKVIQSVMDKIIEHHDALRMVYQHENGNVVQHN 84 (466)
T ss_dssp EECCCCHHHHHHHHTTCTTTTCBEEEEEEEETTCC-----------CHHHHHHHHHHHHHHSGGGGEEEECGGGCCEEEE
T ss_pred CCCCCCHHHHHHHhCCCCCcCcceeEEEEEcCCCC-----------CHHHHHHHHHHHHHhChHhheEEecCCCceeeec
Confidence 568899876521 1 1122333445544322 378899999999999999988875 122 111
Q ss_pred cC--CCCeeEEEEEEcC--ChhhhcCCCCcccccccccCCCCCCccccccCcce-eEEEEEEecCCeEEEEeeecceecc
Q 045056 92 CN--DEGIYFVEARAKS--PLNEFLNKPDPSLTHKFFPVEGSESLTGRIAGAHV-AKVQITSFPCGGLVICSCFSHMFGD 166 (299)
Q Consensus 92 ~~--~~gv~f~~a~~~~--~~~dl~~~p~~~~~~~l~p~~~~~~~~g~~~~~~P-l~vQvt~f~cGG~~lg~~~~H~v~D 166 (299)
.. ...+.+.+..... ..++... ......-. .. +. ...| +.+.+-... ++-.|-+.+||.++|
T Consensus 85 ~~~~~~~~~~~~~d~~~~~~~~~~~~-----~~~~~~~~-~f--dl----~~~pl~r~~l~~~~-~~~~l~l~~HH~i~D 151 (466)
T 2xhg_A 85 RGLGGQLYDFFSYNLTAQPDVQQAIE-----AETQRLHS-SM--NL----QEGPLVKVALFQTL-HGDHLFLAIHHLVVD 151 (466)
T ss_dssp CCSSSCCCEEEEEECTTCSCHHHHHH-----HHHHHHHT-TC--CT----TTCCCEEEEEEEET-TEEEEEEEEEGGGCC
T ss_pred cccccccceeEEEecCCcccHHHHHH-----HHHHHHHh-cc--CC----CCCCeEEEEEEEcC-CCCEEEEEeeeeeec
Confidence 11 1122222211110 0000000 00000000 00 01 3446 777777776 444477999999999
Q ss_pred hhhHHHHHHHHHHHHhcCCCC-CCccCC---Cc-C-----CccccCCCCCCcCccccc----c-----ccc----ccccC
Q 045056 167 GTSFSLFMKSWAATARKSNTG-AAVMCP---NF-D-----ASILFPPNEAYPRELNWN----S-----LFT----RFFET 223 (299)
Q Consensus 167 g~~~~~fl~~Wa~~~rg~~~~-~~~~~P---~~-d-----r~~l~~~~~~p~~~~~~~----~-----~~~----~~~~~ 223 (299)
|.|+..|++.+.+..++...+ ....+| .+ | +..+.... ...-..-|. + .|. +....
T Consensus 152 g~S~~~l~~el~~~Y~~~~~g~~~~l~~~~~~y~~~~~~~~~~~~~~~-~~~~~~~W~~~l~~~~~~~lp~~~~~~~~~~ 230 (466)
T 2xhg_A 152 GISWRILFEDLATGYAQALAGQAISLPEKTDSFQSWSQWLQEYANEAD-LLSEIPYWESLESQAKNVSLPKDYEVTDCKQ 230 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCCCCCCSCHHHHHHHHHHHTTSHH-HHTTHHHHHHHHHHCCCCCCCCSSCCSSCBG
T ss_pred hhhHHHHHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHhcCcc-chhhhHHHHHhhccCCcccCCcccccccccc
Confidence 999999999999887531100 111111 11 0 00000000 000000000 0 010 01112
Q ss_pred CCeEEEEEEEcHHHHHHHHHHhhhcCCCCCCceehhhHHHHHHHHHhhccCCCCCCCceEEEEEecCCCCC
Q 045056 224 GRFVMRRFVFDAKAIADLKAKAIISSCVQNPTRVEVVSALLSKHIMATFKLKSGPHKPTLLTHVVNLRPKA 294 (299)
Q Consensus 224 ~~~~~~~f~~s~~~l~~Lk~~a~~~~~~~~~St~dal~A~~W~~~~rar~~~~~~~~~~~l~~~vd~R~rl 294 (299)
.......+.++.+..++|++.+. .. ..+|.++++.|.+-..+.+-.+ .+...+.+.+++|...
T Consensus 231 ~~~~~~~~~l~~~~~~~l~~~~~-~~--~~~t~~~~llaa~~~~l~~~~~-----~~dv~ig~~~~gR~~~ 293 (466)
T 2xhg_A 231 KSVRNMRIRLHPEETEQLLKHAN-QA--YQTEINDLLLAALGLAFAEWSK-----LAQIVIHLEGHGREDI 293 (466)
T ss_dssp GGEEEEEEECCHHHHHHHHHTGG-GT--TTCCHHHHHHHHHHHHHHHHHC-----CSEEEEEEEECCCCSC
T ss_pred ccceEEEEEcCHHHHHHHHHHhH-Hh--hCCCHHHHHHHHHHHHHHHHhC-----CCceEEEecCCCCCcc
Confidence 33567788999999999998774 21 2478888888877666666543 2467899999999763
No 12
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=96.55 E-value=0.025 Score=53.72 Aligned_cols=144 Identities=13% Similarity=0.018 Sum_probs=85.8
Q ss_pred eEEEEeeecceecchhhHHHHHHHHHHHHhcCCC-CCCccCCCcC----CccccCCC----CCCc--Cccccc----c--
Q 045056 153 GLVICSCFSHMFGDGTSFSLFMKSWAATARKSNT-GAAVMCPNFD----ASILFPPN----EAYP--RELNWN----S-- 215 (299)
Q Consensus 153 G~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~rg~~~-~~~~~~P~~d----r~~l~~~~----~~p~--~~~~~~----~-- 215 (299)
-.-|.+.+||.++||.|...|++.+=+....... +.....|.++ -+.|.|+- ++|. ..+++. .
T Consensus 177 ~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~~~~~~~~~g~E~~~L~P~~e~~~~~p~~~~~~e~~~~~~~~~ 256 (519)
T 3fot_A 177 TVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDSREMKKIQWGQEIKNLSPPVVDSLKLDINTLGSEFDDKCTEYT 256 (519)
T ss_dssp EEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CGGGSCCCCTTTTGGGSCCCTGGGBSSCGGGCCHHHHHHHHHHH
T ss_pred eEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCccCCCcCCCCcccccCCcCHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 4667788999999999999999998887753210 0112233332 11233321 1221 111110 0
Q ss_pred ---------cccccc-cCCCeEEEEEEEcHHHHHHHHHHhhhcCCCCCCceehhhHHHHHHHHHhhccC-CCCCCCceEE
Q 045056 216 ---------LFTRFF-ETGRFVMRRFVFDAKAIADLKAKAIISSCVQNPTRVEVVSALLSKHIMATFKL-KSGPHKPTLL 284 (299)
Q Consensus 216 ---------~~~~~~-~~~~~~~~~f~~s~~~l~~Lk~~a~~~~~~~~~St~dal~A~~W~~~~rar~~-~~~~~~~~~l 284 (299)
..-+.. ....-....+.|+.+..++|++.|+ ...+..+|-..+|.|.+-.++.+.... ..........
T Consensus 257 ~~~~~~~~~~~~P~~~~~~~~~~~~~~ls~~~t~~L~~~ck-~~~~~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~~ 335 (519)
T 3fot_A 257 SALVANYKSRGMKFQPGLALPRCVIHKLSADESIDIVKAVK-TRLGPGFTISHLTQAAIVLALLDHLKPNDLSDDEVFIS 335 (519)
T ss_dssp HHHHHHHHSCCSBCCCCCCCEEEEEEECCHHHHHHHHHHHH-HHTCTTCCHHHHHHHHHHHHHHHHC----CCTTCCEEE
T ss_pred HHhhcCCCcccCCCCCCCCCcceEEEEcCHHHHHHHHHHHH-hcCCCCeeHHHHHHHHHHHHHHhhcCCcccCCCccEEE
Confidence 000111 1123445778999999999999998 543346888899977777777664321 1111346789
Q ss_pred EEEecCCCCCCCC
Q 045056 285 THVVNLRPKARPP 297 (299)
Q Consensus 285 ~~~vd~R~rl~pp 297 (299)
..+||+|+.+.++
T Consensus 336 ~~pvnlR~~l~~~ 348 (519)
T 3fot_A 336 PTSVDGRRWLRED 348 (519)
T ss_dssp EEEEECGGGBCHH
T ss_pred EeeeeccccCCCc
Confidence 9999999998653
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=85.12 E-value=0.66 Score=38.52 Aligned_cols=29 Identities=17% Similarity=0.250 Sum_probs=26.3
Q ss_pred EEEEeeecceecchhhHHHHHHHHHHHHh
Q 045056 154 LVICSCFSHMFGDGTSFSLFMKSWAATAR 182 (299)
Q Consensus 154 ~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~r 182 (299)
+-|++++||.++||.-+..||+.+.+...
T Consensus 181 m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 181 LPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 67889999999999999999999998763
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=84.42 E-value=0.74 Score=38.35 Aligned_cols=28 Identities=32% Similarity=0.384 Sum_probs=25.4
Q ss_pred EEEEeeecceecchhhHHHHHHHHHHHH
Q 045056 154 LVICSCFSHMFGDGTSFSLFMKSWAATA 181 (299)
Q Consensus 154 ~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~ 181 (299)
+-|++++||.++||.-+..|++.+.+..
T Consensus 189 m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 189 MPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 5788999999999999999999998764
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=84.14 E-value=0.77 Score=38.28 Aligned_cols=29 Identities=10% Similarity=0.154 Sum_probs=26.7
Q ss_pred EEEEeeecceecchhhHHHHHHHHHHHHh
Q 045056 154 LVICSCFSHMFGDGTSFSLFMKSWAATAR 182 (299)
Q Consensus 154 ~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~r 182 (299)
+-|++++||.++||.-+..|++.+.+...
T Consensus 185 m~lsls~DHRvvDG~~aa~Fl~~lk~~le 213 (219)
T 1q23_A 185 MPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEchhhChHHHHHHHHHHHHHHh
Confidence 67899999999999999999999998774
No 16
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=82.64 E-value=0.93 Score=38.32 Aligned_cols=30 Identities=13% Similarity=0.199 Sum_probs=27.6
Q ss_pred EEEEeeecceecchhhHHHHHHHHHHHHhc
Q 045056 154 LVICSCFSHMFGDGTSFSLFMKSWAATARK 183 (299)
Q Consensus 154 ~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~rg 183 (299)
+-|+++++|.++||.-+..|++.+.+....
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 233 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLEK 233 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 789999999999999999999999987753
No 17
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=82.17 E-value=1 Score=37.92 Aligned_cols=30 Identities=13% Similarity=0.216 Sum_probs=27.4
Q ss_pred EEEEeeecceecchhhHHHHHHHHHHHHhc
Q 045056 154 LVICSCFSHMFGDGTSFSLFMKSWAATARK 183 (299)
Q Consensus 154 ~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~rg 183 (299)
+-|+++++|.++||.-+..|++.+.+....
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 225 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLED 225 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 569999999999999999999999998764
No 18
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=82.07 E-value=1 Score=38.16 Aligned_cols=30 Identities=13% Similarity=0.165 Sum_probs=27.4
Q ss_pred EEEEeeecceecchhhHHHHHHHHHHHHhc
Q 045056 154 LVICSCFSHMFGDGTSFSLFMKSWAATARK 183 (299)
Q Consensus 154 ~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~rg 183 (299)
+-|+++++|.++||.-+..|++.+.+....
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 237 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLAD 237 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHhC
Confidence 679999999999999999999999998754
No 19
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=82.03 E-value=0.88 Score=38.07 Aligned_cols=31 Identities=13% Similarity=0.209 Sum_probs=27.9
Q ss_pred EEEEeeecceecchhhHHHHHHHHHHHHhcC
Q 045056 154 LVICSCFSHMFGDGTSFSLFMKSWAATARKS 184 (299)
Q Consensus 154 ~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~rg~ 184 (299)
+-|+++++|.+.||.-+..|++.+.+.....
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le~p 217 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIEDP 217 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHTCT
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHhCH
Confidence 4589999999999999999999999988653
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=81.20 E-value=1.1 Score=38.35 Aligned_cols=30 Identities=20% Similarity=0.339 Sum_probs=27.2
Q ss_pred EEEEeeecceecchhhHHHHHHHHHHHHhc
Q 045056 154 LVICSCFSHMFGDGTSFSLFMKSWAATARK 183 (299)
Q Consensus 154 ~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~rg 183 (299)
+-|+++++|.++||.-+..||+.+.+....
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le~ 253 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLEN 253 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHhC
Confidence 568999999999999999999999998753
No 21
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=77.65 E-value=1.7 Score=37.07 Aligned_cols=31 Identities=23% Similarity=0.358 Sum_probs=28.2
Q ss_pred EEEEeeecceecchhhHHHHHHHHHHHHhcC
Q 045056 154 LVICSCFSHMFGDGTSFSLFMKSWAATARKS 184 (299)
Q Consensus 154 ~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~rg~ 184 (299)
+-|+++++|.+.||.-+..||+.|.+.....
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~P 240 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVEKI 240 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHhCh
Confidence 4599999999999999999999999998754
No 22
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=76.76 E-value=1.9 Score=36.67 Aligned_cols=30 Identities=20% Similarity=0.346 Sum_probs=27.5
Q ss_pred EEEEeeecceecchhhHHHHHHHHHHHHhc
Q 045056 154 LVICSCFSHMFGDGTSFSLFMKSWAATARK 183 (299)
Q Consensus 154 ~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~rg 183 (299)
+-|+++++|.+.||.-+..||+.|.+....
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 234 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIES 234 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHhC
Confidence 468999999999999999999999998864
No 23
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=63.37 E-value=21 Score=22.65 Aligned_cols=49 Identities=24% Similarity=0.330 Sum_probs=37.6
Q ss_pred CCeEEEEEEEcHHHHHHHHHHhhhcCCCCCCceehhhHHHHHHHHHhhccCCCCCCC
Q 045056 224 GRFVMRRFVFDAKAIADLKAKAIISSCVQNPTRVEVVSALLSKHIMATFKLKSGPHK 280 (299)
Q Consensus 224 ~~~~~~~f~~s~~~l~~Lk~~a~~~~~~~~~St~dal~A~~W~~~~rar~~~~~~~~ 280 (299)
.+.-...|+||.|+-+.|.+.|. ++ .|.+..+|=|.|.++.....+.++
T Consensus 13 k~~~~Vs~Y~SkEey~~L~klA~-eE-------~eSV~sfIKR~IlK~l~ykkgtnq 61 (66)
T 2k1o_A 13 KRNFSVTFYLSKEEHDVLRRLAD-EE-------VESVNSFVKRHILKTIIYKKGTNQ 61 (66)
T ss_dssp CCCEEEEEEEEHHHHHHHHHHHH-TT-------CSCHHHHHHHHHHHHHCSSCSSCC
T ss_pred ccceEEEEEecHHHHHHHHHHHH-HH-------HHHHHHHHHHHHHHHHHHhcCCCc
Confidence 44567789999999999999998 43 466788899999988765444333
No 24
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=59.31 E-value=1.9 Score=39.65 Aligned_cols=30 Identities=17% Similarity=0.215 Sum_probs=0.0
Q ss_pred EEEEeeecceecchhhHHHHHHHHHHHHhc
Q 045056 154 LVICSCFSHMFGDGTSFSLFMKSWAATARK 183 (299)
Q Consensus 154 ~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~rg 183 (299)
+-|+++++|.++||.-+..||+.|.+.+..
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le~ 420 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLSD 420 (428)
T ss_dssp ------------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHhC
Confidence 359999999999999999999999988754
No 25
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=46.78 E-value=36 Score=20.80 Aligned_cols=39 Identities=15% Similarity=0.240 Sum_probs=29.5
Q ss_pred EEEEEEEcHHHHHHHHHHhhhcCCCCCCceehhhHHHHHHHHHhhcc
Q 045056 227 VMRRFVFDAKAIADLKAKAIISSCVQNPTRVEVVSALLSKHIMATFK 273 (299)
Q Consensus 227 ~~~~f~~s~~~l~~Lk~~a~~~~~~~~~St~dal~A~~W~~~~rar~ 273 (299)
....|+||.|+-+.|++.|. ++ .|.+..+|=|.|.++..
T Consensus 2 ~~Vs~Y~SkEey~~L~klA~-eE-------~eSV~sfIKR~IlK~lr 40 (55)
T 1x93_A 2 RAVSLYFSDEQYQKLEKMAN-EE-------EESVGSYIKRYILKALR 40 (55)
T ss_dssp EEEEEEECHHHHHHHHHHHH-HT-------TSCTTHHHHHHHHHHHT
T ss_pred ceEEEEecHHHHHHHHHHHH-HH-------HHHHHHHHHHHHHHHHH
Confidence 35679999999999999998 43 34455677777777763
No 26
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=43.22 E-value=12 Score=19.00 Aligned_cols=19 Identities=21% Similarity=0.072 Sum_probs=15.3
Q ss_pred CCCceehhhHHHHHHHHHh
Q 045056 252 QNPTRVEVVSALLSKHIMA 270 (299)
Q Consensus 252 ~~~St~dal~A~~W~~~~r 270 (299)
+-+++.|-|+-++|+++..
T Consensus 6 svftsqdylsdhlwralna 24 (26)
T 2xl1_A 6 SVFTSQDYLSDHLWRALNA 24 (26)
T ss_pred ceeecHHHHHHHHHHHHhc
Confidence 3467789999999998763
No 27
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=36.12 E-value=21 Score=36.89 Aligned_cols=29 Identities=14% Similarity=0.250 Sum_probs=26.1
Q ss_pred EEEEeeecceecchhhHHHHHHHHHHHHh
Q 045056 154 LVICSCFSHMFGDGTSFSLFMKSWAATAR 182 (299)
Q Consensus 154 ~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~r 182 (299)
+-|+++++|.+.||.-+..||+.+.+...
T Consensus 192 m~lsls~DHRviDGa~aa~FL~~lk~~Le 220 (1113)
T 2xt6_A 192 ITLTSTYDHRIIQGAESGDFLRTIHQLLL 220 (1113)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHTT
T ss_pred eEEEEEECcceechHHHHHHHHHHHHHHh
Confidence 78999999999999999999988877664
Done!