Query 045058
Match_columns 1005
No_of_seqs 580 out of 4345
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 16:31:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045058.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045058hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 5.3E-30 1.8E-34 279.0 28.4 243 258-544 9-274 (284)
2 2r83_A Synaptotagmin-1; C2A-C2 100.0 1.8E-29 6E-34 274.9 30.5 228 435-707 20-272 (284)
3 1dqv_A Synaptotagmin III; beta 100.0 4.3E-30 1.5E-34 280.6 18.8 240 3-380 19-278 (296)
4 1dqv_A Synaptotagmin III; beta 100.0 1.4E-29 4.8E-34 276.5 20.2 244 258-544 10-277 (296)
5 3kwu_A MUNC13-1; calcium bindi 99.8 3E-19 1E-23 173.3 18.0 122 2-130 15-146 (148)
6 2dmh_A Myoferlin; beta-sandwic 99.8 5.2E-19 1.8E-23 169.9 18.3 126 3-132 6-134 (140)
7 2ep6_A MCTP2 protein; beta san 99.8 1.1E-19 3.9E-24 172.7 13.4 122 593-726 10-131 (133)
8 2ep6_A MCTP2 protein; beta san 99.8 1.9E-19 6.4E-24 171.2 13.1 122 2-131 11-132 (133)
9 2fk9_A Protein kinase C, ETA t 99.8 3E-19 1E-23 172.2 14.2 119 593-726 26-156 (157)
10 3kwu_A MUNC13-1; calcium bindi 99.8 1.4E-18 4.9E-23 168.5 18.1 126 595-726 16-146 (148)
11 2dmh_A Myoferlin; beta-sandwic 99.8 1.4E-18 4.7E-23 166.9 17.2 124 594-727 5-133 (140)
12 3b7y_A E3 ubiquitin-protein li 99.8 9.7E-19 3.3E-23 170.7 16.1 124 3-131 19-153 (153)
13 2fk9_A Protein kinase C, ETA t 99.8 3.6E-19 1.2E-23 171.6 12.7 115 3-130 28-156 (157)
14 1wfj_A Putative elicitor-respo 99.8 6.5E-19 2.2E-23 168.3 14.2 123 593-728 7-131 (136)
15 1wfj_A Putative elicitor-respo 99.8 5.5E-19 1.9E-23 168.8 13.3 122 2-131 8-130 (136)
16 3m7f_B E3 ubiquitin-protein li 99.8 1.4E-18 4.8E-23 173.6 16.2 124 3-131 7-141 (176)
17 3b7y_A E3 ubiquitin-protein li 99.8 2.3E-18 7.9E-23 168.1 14.7 124 593-726 17-152 (153)
18 3pyc_A E3 ubiquitin-protein li 99.8 2.5E-18 8.6E-23 163.1 13.6 122 3-129 4-131 (132)
19 1gmi_A Protein kinase C, epsil 99.8 2.5E-18 8.6E-23 163.9 12.6 116 3-131 5-133 (136)
20 1gmi_A Protein kinase C, epsil 99.8 5.2E-18 1.8E-22 161.7 13.9 118 595-727 5-133 (136)
21 3m7f_B E3 ubiquitin-protein li 99.8 7.7E-18 2.6E-22 168.3 15.6 125 593-727 5-141 (176)
22 1rlw_A Phospholipase A2, CALB 99.8 4E-18 1.4E-22 160.4 12.8 117 595-724 2-122 (126)
23 1rlw_A Phospholipase A2, CALB 99.7 1E-17 3.5E-22 157.6 13.3 117 2-129 1-123 (126)
24 2nq3_A Itchy homolog E3 ubiqui 99.7 1.4E-17 4.7E-22 164.8 14.2 123 3-131 35-161 (173)
25 2z0u_A WW domain-containing pr 99.7 1.1E-17 3.8E-22 162.3 9.8 107 3-111 42-154 (155)
26 3pyc_A E3 ubiquitin-protein li 99.7 4.3E-17 1.5E-21 154.6 13.7 124 595-725 4-131 (132)
27 2bwq_A Regulating synaptic mem 99.7 3.5E-17 1.2E-21 154.6 12.6 106 3-111 17-129 (129)
28 2b3r_A Phosphatidylinositol-4- 99.7 5.6E-17 1.9E-21 153.9 13.1 108 3-114 19-132 (134)
29 2d8k_A Synaptotagmin VII; exoc 99.7 5E-17 1.7E-21 156.1 12.8 111 3-115 25-138 (141)
30 1v27_A Regulating synaptic mem 99.7 5.4E-17 1.9E-21 156.0 11.6 110 3-115 20-136 (141)
31 1ugk_A Synaptotagmin IV, KIAA1 99.7 1.9E-16 6.4E-21 151.4 14.8 110 3-114 21-135 (138)
32 2b3r_A Phosphatidylinositol-4- 99.7 1.2E-16 4.3E-21 151.5 12.9 103 594-706 18-129 (134)
33 2d8k_A Synaptotagmin VII; exoc 99.7 3.6E-16 1.2E-20 150.1 15.8 107 594-709 24-137 (141)
34 2nq3_A Itchy homolog E3 ubiqui 99.7 1.8E-16 6.1E-21 156.8 13.9 126 269-396 35-162 (173)
35 3fdw_A Synaptotagmin-like prot 99.7 7.7E-17 2.6E-21 156.1 10.0 111 3-116 22-138 (148)
36 3f04_A Synaptotagmin-1; C2A, c 99.7 1.3E-16 4.4E-21 153.7 11.4 107 3-112 33-142 (143)
37 1rsy_A Synaptotagmin I; calciu 99.7 1.9E-16 6.6E-21 154.0 12.8 108 3-113 41-151 (152)
38 3fdw_A Synaptotagmin-like prot 99.7 7.6E-17 2.6E-21 156.2 9.8 110 593-710 20-137 (148)
39 2dmg_A KIAA1228 protein; beta- 99.7 1.7E-16 5.7E-21 152.7 12.0 110 3-115 23-138 (142)
40 1rsy_A Synaptotagmin I; calciu 99.7 1.7E-16 5.9E-21 154.3 11.9 105 593-706 39-149 (152)
41 1rh8_A Piccolo protein; beta-s 99.7 5.4E-17 1.9E-21 156.1 7.9 109 3-114 17-140 (142)
42 3fbk_A RGS3, RGP3, regulator o 99.7 2.9E-16 1E-20 152.8 12.4 110 2-114 25-139 (153)
43 1a25_A CALB, protein kinase C 99.7 4.1E-16 1.4E-20 151.2 13.1 106 3-113 30-140 (149)
44 3rdl_A Protein kinase C alpha 99.7 4E-16 1.4E-20 149.0 12.5 106 3-113 15-125 (137)
45 3fbk_A RGS3, RGP3, regulator o 99.7 4.4E-16 1.5E-20 151.6 12.6 106 593-708 24-138 (153)
46 1wfm_A Synaptotagmin XIII; C2 99.7 8.1E-16 2.8E-20 146.7 14.1 106 3-114 25-134 (138)
47 2chd_A Rabphilin-3A, exophilin 99.7 3.8E-16 1.3E-20 150.1 11.8 108 3-113 28-141 (142)
48 2z0u_A WW domain-containing pr 99.7 1.9E-16 6.4E-21 153.7 9.5 113 258-376 33-154 (155)
49 2cm5_A Rabphilin-3A; protein t 99.6 1E-15 3.5E-20 151.3 14.7 93 3-97 36-133 (166)
50 1wfm_A Synaptotagmin XIII; C2 99.6 1E-15 3.5E-20 146.0 14.0 102 594-707 24-132 (138)
51 2bwq_A Regulating synaptic mem 99.6 7.3E-16 2.5E-20 145.5 12.6 111 258-376 8-129 (129)
52 3rdl_A Protein kinase C alpha 99.6 6.3E-16 2.2E-20 147.7 11.3 103 596-708 16-125 (137)
53 2enp_A B/K protein; C2 type 1, 99.6 7.4E-16 2.5E-20 149.1 11.8 109 593-707 23-141 (147)
54 2enp_A B/K protein; C2 type 1, 99.6 5.9E-16 2E-20 149.7 11.1 109 3-114 25-143 (147)
55 1tjx_A Similar to synaptotagmi 99.6 1.6E-15 5.6E-20 148.7 14.4 110 3-114 24-149 (159)
56 1a25_A CALB, protein kinase C 99.6 6.7E-16 2.3E-20 149.7 11.5 102 596-707 31-139 (149)
57 2q3x_A Regulating synaptic mem 99.6 4E-16 1.4E-20 154.7 9.9 107 595-709 29-141 (171)
58 3f04_A Synaptotagmin-1; C2A, c 99.6 8.3E-16 2.8E-20 148.0 11.8 113 258-377 24-142 (143)
59 3n5a_A Synaptotagmin-7; calciu 99.6 1.8E-15 6.2E-20 144.7 14.1 93 3-97 15-112 (138)
60 2q3x_A Regulating synaptic mem 99.6 7.3E-16 2.5E-20 152.8 11.6 106 3-114 29-141 (171)
61 2cjt_A UNC-13 homolog A, MUNC1 99.6 7E-16 2.4E-20 145.1 10.9 90 1-101 2-92 (131)
62 1tjx_A Similar to synaptotagmi 99.6 2.7E-15 9.2E-20 147.2 14.9 105 593-706 22-146 (159)
63 3n5a_A Synaptotagmin-7; calciu 99.6 2.2E-15 7.7E-20 144.1 13.2 103 593-706 13-123 (138)
64 1v27_A Regulating synaptic mem 99.6 6.7E-16 2.3E-20 148.3 9.5 116 258-381 11-137 (141)
65 1w15_A Synaptotagmin IV; metal 99.6 3.5E-15 1.2E-19 145.3 14.6 106 3-113 29-139 (153)
66 1rh8_A Piccolo protein; beta-s 99.6 4.8E-16 1.6E-20 149.5 8.3 114 258-380 10-141 (142)
67 2cm5_A Rabphilin-3A; protein t 99.6 4.1E-15 1.4E-19 147.0 14.8 93 593-694 34-134 (166)
68 2cjt_A UNC-13 homolog A, MUNC1 99.6 1.8E-15 6.1E-20 142.3 10.7 87 595-696 4-91 (131)
69 1ugk_A Synaptotagmin IV, KIAA1 99.6 4.4E-15 1.5E-19 141.9 12.5 116 259-380 13-136 (138)
70 2chd_A Rabphilin-3A, exophilin 99.6 3.5E-15 1.2E-19 143.3 11.4 114 258-378 19-141 (142)
71 2dmg_A KIAA1228 protein; beta- 99.6 2.4E-15 8.1E-20 144.6 10.0 114 259-380 15-138 (142)
72 2cjs_A UNC-13 homolog A, MUNC1 99.6 1.1E-14 3.8E-19 142.5 13.1 118 594-726 12-140 (167)
73 3l9b_A Otoferlin; C2-domain, b 99.6 1.6E-14 5.5E-19 132.3 12.6 119 4-131 21-140 (144)
74 3l9b_A Otoferlin; C2-domain, b 99.6 3.3E-14 1.1E-18 130.3 14.0 117 596-728 21-141 (144)
75 1w15_A Synaptotagmin IV; metal 99.6 4.1E-14 1.4E-18 137.7 14.9 88 435-523 31-125 (153)
76 2cjs_A UNC-13 homolog A, MUNC1 99.5 3.8E-14 1.3E-18 138.7 12.6 117 4-131 14-141 (167)
77 3nsj_A Perforin-1; pore formin 99.5 5.8E-14 2E-18 162.2 16.2 114 593-729 391-506 (540)
78 3jzy_A Intersectin 2; C2 domai 99.5 4.9E-14 1.7E-18 166.4 13.5 119 593-726 384-507 (510)
79 3nsj_A Perforin-1; pore formin 99.5 3.1E-13 1.1E-17 156.1 15.6 113 4-133 394-506 (540)
80 1djx_A PLC-D1, phosphoinositid 99.5 7.3E-13 2.5E-17 156.8 18.0 120 3-130 496-623 (624)
81 1djx_A PLC-D1, phosphoinositid 99.4 5.1E-13 1.7E-17 158.2 15.8 122 594-726 495-623 (624)
82 3jzy_A Intersectin 2; C2 domai 99.4 4.5E-13 1.5E-17 158.1 14.2 121 268-393 385-506 (510)
83 3bxj_A RAS GTPase-activating p 99.4 1.6E-14 5.6E-19 166.9 0.3 124 594-728 9-158 (483)
84 1cjy_A CPLA2, protein (cytosol 99.4 7.7E-13 2.6E-17 157.2 9.9 106 2-113 16-127 (749)
85 3bxj_A RAS GTPase-activating p 99.3 2.9E-13 1E-17 156.4 0.4 119 3-131 10-157 (483)
86 1cjy_A CPLA2, protein (cytosol 99.3 3.8E-12 1.3E-16 151.4 9.5 105 268-378 16-127 (749)
87 3ohm_B 1-phosphatidylinositol- 99.1 3.1E-10 1.1E-14 137.1 15.1 112 4-131 725-845 (885)
88 3qr0_A Phospholipase C-beta (P 99.1 5.6E-10 1.9E-14 134.3 16.3 112 4-131 650-771 (816)
89 3qr0_A Phospholipase C-beta (P 99.1 3.5E-10 1.2E-14 136.1 14.1 111 595-726 649-770 (816)
90 3pfq_A PKC-B, PKC-beta, protei 99.1 1.8E-10 6.2E-15 139.7 10.5 107 3-114 171-282 (674)
91 3ohm_B 1-phosphatidylinositol- 99.1 2.7E-10 9.2E-15 137.7 11.3 111 595-726 724-844 (885)
92 2zkm_X 1-phosphatidylinositol- 99.1 9.1E-10 3.1E-14 133.5 15.8 112 3-130 677-798 (799)
93 3pfq_A PKC-B, PKC-beta, protei 99.0 2.9E-10 9.9E-15 137.9 9.8 104 595-708 171-281 (674)
94 2zkm_X 1-phosphatidylinositol- 99.0 7.2E-10 2.5E-14 134.4 12.9 112 594-726 676-798 (799)
95 1yrk_A NPKC-delta, protein kin 99.0 4.3E-09 1.5E-13 93.3 11.9 110 4-130 6-124 (126)
96 2enj_A NPKC-theta, protein kin 99.0 3.3E-09 1.1E-13 95.2 11.3 111 4-131 10-130 (138)
97 1yrk_A NPKC-delta, protein kin 98.7 1.3E-07 4.5E-12 83.9 10.8 114 270-394 6-124 (126)
98 2enj_A NPKC-theta, protein kin 98.6 3.5E-07 1.2E-11 82.2 12.2 110 595-725 9-128 (138)
99 3l4c_A Dedicator of cytokinesi 88.7 6.1 0.00021 39.0 13.3 72 4-77 27-117 (220)
100 2yrb_A Protein fantom; beta sa 87.2 1.2 4.3E-05 41.4 6.9 123 268-395 16-150 (156)
101 2wxf_A Phosphatidylinositol-4, 84.9 3 0.0001 51.1 10.7 72 3-77 216-293 (940)
102 2yrb_A Protein fantom; beta sa 84.1 2.4 8.1E-05 39.5 7.2 124 4-131 18-150 (156)
103 3hhm_A Phosphatidylinositol-4, 81.5 6.4 0.00022 48.6 11.6 108 3-129 354-470 (1091)
104 3l4c_A Dedicator of cytokinesi 77.0 19 0.00066 35.5 11.3 39 303-341 78-118 (220)
105 2wxf_A Phosphatidylinositol-4, 76.1 9.1 0.00031 46.9 10.7 86 435-524 218-324 (940)
106 1e7u_A Phosphatidylinositol 3- 73.8 9.6 0.00033 46.8 10.0 74 3-77 217-295 (961)
107 2y3a_A Phosphatidylinositol-4, 73.6 3.4 0.00012 51.2 6.2 72 3-77 352-429 (1092)
108 3hhm_A Phosphatidylinositol-4, 70.5 13 0.00044 46.0 10.1 87 435-524 356-455 (1091)
109 1e7u_A Phosphatidylinositol 3- 62.4 26 0.0009 42.9 10.6 88 435-524 219-330 (961)
110 2y3a_A Phosphatidylinositol-4, 59.6 9.1 0.00031 47.5 5.9 92 595-692 352-469 (1092)
111 1p3q_Q VPS9P, vacuolar protein 40.7 16 0.00056 27.1 2.4 36 756-791 4-39 (54)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.97 E-value=5.3e-30 Score=279.04 Aligned_cols=243 Identities=26% Similarity=0.392 Sum_probs=200.0
Q ss_pred cceeeeccccceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC---eeeeeeeecCCCCCeeeeEEEEeecC--CCCcE
Q 045058 258 KTASTYDLVERMYFLYVRVVKARELPAMDLTGSIDPFVEVKIGN---YKGITKHYEKNQNPQWHQVFAFSRDR--MQASV 332 (1005)
Q Consensus 258 ~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~---~~~kT~~~~~~~nP~wne~f~f~~~~--~~~~~ 332 (1005)
.++..|+. ..+.|.|+|++|++|+.++.+|.+||||++++++ ..++|+++++++||.|||+|.|.+.. +....
T Consensus 9 ~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~ 86 (284)
T 2r83_A 9 QYSLDYDF--QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKT 86 (284)
T ss_dssp EEEEEEET--TTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCE
T ss_pred EEEEEEEC--CCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCE
Confidence 34555544 4589999999999999999999999999999964 46789999999999999999998753 34579
Q ss_pred EEEEEEeCC-CCCCceeEEEEEEceecCCCCCCCCCCCCeEEEeecCCCC--ccceEEEEEEEEeccCCcccccccCCCC
Q 045058 333 LEVVIKDKD-LVKDDFVGIVRFDINEVPLRVPPDSPLAPEWYRLEDKKGE--KIKGELMLAVWIGTQADEAFSDAWHSDA 409 (1005)
Q Consensus 333 l~v~V~d~~-~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~--~~~G~i~l~~~~~~~~d~~~~~~~~~~~ 409 (1005)
|.|+|||++ ++++++||++.++|.++..+ .....|++|....+. ...|+|.+++.|.+.
T Consensus 87 l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~-----~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p~------------- 148 (284)
T 2r83_A 87 LVMAVYDFDRFSKHDIIGEFKVPMNTVDFG-----HVTEEWRDLQSAEKEEQEKLGDICFSLRYVPT------------- 148 (284)
T ss_dssp EEEEEEECCSSSCCCEEEEEEEEGGGCCCS-----SCEEEEEECBCCSSCCCCCCCEEEEEEEEETT-------------
T ss_pred EEEEEEECCCCCCCceeEEEEEcchhcccC-----CcceeEEEeeccccccccccccEEEEEEecCc-------------
Confidence 999999999 77899999999999999764 356789999876432 257999998876431
Q ss_pred CCCCCCCCccccccccccccCCceEEEEEEEEEeeeCCCCCCCCCCCcEEEEEEC--C---eEEeeecccCCCCCccccc
Q 045058 410 ATPVDSTPAITAVIRSKVYHSPRLWYVRVNVVEAQDLVPTEKNHFPDVYVKAQIG--N---QVLKTKICQARTLSAVWNE 484 (1005)
Q Consensus 410 ~~~~~~~~~~~~~~r~~~~~~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~lg--~---~~~kT~~~~~~t~~P~w~e 484 (1005)
.+.|.|.|++|+||+.++.++.+||||+++++ + ..++|++++ ++.||.|||
T Consensus 149 -----------------------~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~-~t~nP~wne 204 (284)
T 2r83_A 149 -----------------------AGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKK-NTLNPYYNE 204 (284)
T ss_dssp -----------------------TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCC-SCSSCEEEE
T ss_pred -----------------------CCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceec-CCCCCEEce
Confidence 23799999999999999999999999999993 2 467898886 999999999
Q ss_pred EEEEEeeCCC--CCeEEEEEEeccCCCCCceeEEEEEcccccccc---c-----ccccccceeEEccCCC
Q 045058 485 DLLFVAAEPF--EDHLVLTVEDRVGPGKDEIIGRVIIPLSAIEKR---A-----DERIIHSRWFNLEKPV 544 (1005)
Q Consensus 485 ~f~f~v~~~~--~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~---~-----~~~~~~~~w~~L~~~~ 544 (1005)
.|.|.+..+. ...|.|+|||++.++++++||++.|+++.+... + ..+....+||+|.+..
T Consensus 205 ~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~~~ 274 (284)
T 2r83_A 205 SFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVEE 274 (284)
T ss_dssp EEEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBCHH
T ss_pred eEEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCCcc
Confidence 9999986552 447999999999999999999999999864321 1 1234567999998754
No 2
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.97 E-value=1.8e-29 Score=274.90 Aligned_cols=228 Identities=26% Similarity=0.365 Sum_probs=186.8
Q ss_pred EEEEEEEEeeeCCCCCCCCCCCcEEEEEEC---CeEEeeecccCCCCCcccccEEEEEeeCC--CCCeEEEEEEeccCCC
Q 045058 435 YVRVNVVEAQDLVPTEKNHFPDVYVKAQIG---NQVLKTKICQARTLSAVWNEDLLFVAAEP--FEDHLVLTVEDRVGPG 509 (1005)
Q Consensus 435 ~L~V~v~~a~~L~~~d~~~~~dpyv~v~lg---~~~~kT~~~~~~t~~P~w~e~f~f~v~~~--~~~~l~i~V~d~d~~~ 509 (1005)
.|.|+|++|+||+.++.++.+||||++.++ .+.++|++++ ++.||.|||.|.|.+... ....|.|+|||++.++
T Consensus 20 ~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~-~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~~~ 98 (284)
T 2r83_A 20 QLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHR-KTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRFS 98 (284)
T ss_dssp EEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCC-SCSSCEEEEEEEECCCGGGCTTCEEEEEEEECCSSS
T ss_pred EEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCccc-CCCCCeeCceEEEEechHHhCcCEEEEEEEECCCCC
Confidence 799999999999999999999999999994 3578999996 899999999999998653 4578999999999999
Q ss_pred CCceeEEEEEcccccccccccccccceeEEccCCCccccccccccccccceeEEEeecCCccccCCCccccCCCcccccc
Q 045058 510 KDEIIGRVIIPLSAIEKRADERIIHSRWFNLEKPVAVDVDQLKKEKFSSRIHLRVCLDGGYHVLDESTHYSSDLRPTAKQ 589 (1005)
Q Consensus 510 ~d~~iG~~~i~l~~l~~~~~~~~~~~~w~~L~~~~~~~~~~~~~~~~~~~i~l~~~l~~~~~~~~~~~~~~~d~~~~~~~ 589 (1005)
++++||++.++|.++.... ....|++|....... ....|.+.+.+..
T Consensus 99 ~~~~lG~~~i~l~~l~~~~----~~~~w~~L~~~~~~~------~~~~G~i~l~l~~----------------------- 145 (284)
T 2r83_A 99 KHDIIGEFKVPMNTVDFGH----VTEEWRDLQSAEKEE------QEKLGDICFSLRY----------------------- 145 (284)
T ss_dssp CCCEEEEEEEEGGGCCCSS----CEEEEEECBCCSSCC------CCCCCEEEEEEEE-----------------------
T ss_pred CCceeEEEEEcchhcccCC----cceeEEEeecccccc------ccccccEEEEEEe-----------------------
Confidence 9999999999999987542 467899998764311 1123555544432
Q ss_pred cCCCcceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEEC--C---EEEEeeeccCCCCceeccEEEEEEeCC---CceE
Q 045058 590 LWRPSIGILELGILNAVGLHPMKTRDGRGTSDTYCVAKYG--H---KWVRTRTLVDNLSPKYNEQYTWEVFDP---ATVL 661 (1005)
Q Consensus 590 ~~~~~~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~g--~---~~~~T~~~~~t~nP~wne~f~~~v~~~---~~~l 661 (1005)
.+..|.|.|.|++|+||++++ ..|.+||||++.+. + ...+|+++++++||+|||.|.|.+..+ ...|
T Consensus 146 --~p~~~~l~v~v~~a~~L~~~d---~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l 220 (284)
T 2r83_A 146 --VPTAGKLTVVILEAKNLKKMD---VGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQV 220 (284)
T ss_dssp --ETTTTEEEEEEEEEESCCCCS---TTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEE
T ss_pred --cCcCCceEEEEEEeECCCCcC---CCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEE
Confidence 134589999999999999764 47889999999983 3 357999999999999999999999754 3579
Q ss_pred EEEEEeCCCcCCCCCCCCCcccEEEEEEccccc------------CCCEEeeeEeeee
Q 045058 662 TVGVFDNSQLGEKSNGNKDLKIGKVRIRISTLE------------TGRIYTHSYPLLV 707 (1005)
Q Consensus 662 ~i~v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~------------~~~~~~~~~~L~~ 707 (1005)
.|+|||++.++ ++++||.+.|+++.+. .+....+||+|..
T Consensus 221 ~i~V~d~d~~~------~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~ 272 (284)
T 2r83_A 221 VVTVLDYDKIG------KNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 272 (284)
T ss_dssp EEEEEECCSSS------CCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBC
T ss_pred EEEEEeCCCCC------CCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCC
Confidence 99999999876 8999999999998632 3456678999863
No 3
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.97 E-value=4.3e-30 Score=280.55 Aligned_cols=240 Identities=24% Similarity=0.376 Sum_probs=189.6
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeEeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEeCCC
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYF---DGQRFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYNNIG 79 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~---~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~~~ 79 (1005)
.+.|.|+|++|+||+.+|..|.+||||+|++ ++++++|+++++++||+|||+|.|.+...+ ++...|.|+|||++.
T Consensus 19 ~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-l~~~~L~~~V~d~d~ 97 (296)
T 1dqv_A 19 SDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAE-LAQRKLHFSVYDFDR 97 (296)
T ss_dssp SCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGG-GSSCCCEEEEEECCS
T ss_pred CCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHH-hcCCEEEEEEEEcCC
Confidence 4789999999999999999999999999999 456899999999999999999999985432 445689999999964
Q ss_pred CCCCCcccEEEEEe-CCcccCCCCceeeeEecccCCCcceeeeEEEEEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 045058 80 DTNSRSFLGKVCLT-GNSFVPLSDSVVLHYPLEKRGIFSHVRGELGLKVYITDDPSIKSSTPLPAAETFSTKDPSITHTH 158 (1005)
Q Consensus 80 ~~~~d~~lG~~~i~-l~~l~~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (1005)
.++|++||++.++ +.++.........|++|..........|+|.+++.+.+
T Consensus 98 -~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~vsl~y~~--------------------------- 149 (296)
T 1dqv_A 98 -FSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCYLP--------------------------- 149 (296)
T ss_dssp -SSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCCSCCCEEEEEEEEET---------------------------
T ss_pred -CCCCceEEEEEeccccccccCCccceeeeccccccccccccceEEEEEEecc---------------------------
Confidence 5689999999996 55555433344579999765444445688877764432
Q ss_pred CCCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCcccccCCCCccccccccCCCCCCcceeecccCCCCCCCCcccc
Q 045058 159 AQPVANPVTGDTVESRHTFHHLPNPNHHQHHHQHHPSTTVVNRHVPKYEADEMKSEPQPPKLVHMYSAASSQSADYALKE 238 (1005)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (1005)
T Consensus 150 -------------------------------------------------------------------------------- 149 (296)
T 1dqv_A 150 -------------------------------------------------------------------------------- 149 (296)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCcccCceeeccccceeeeccccceeEEEEEEEEeecCCCCCCCCCCCcEEEEEEC--C---eeeeeeeecCCC
Q 045058 239 TSPYLGGGKVVGGRVIHADKTASTYDLVERMYFLYVRVVKARELPAMDLTGSIDPFVEVKIG--N---YKGITKHYEKNQ 313 (1005)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~--~---~~~kT~~~~~~~ 313 (1005)
..+.|.|+|++|++|+.++.+|.+||||++++. + .+++|++++++.
T Consensus 150 -----------------------------~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~ 200 (296)
T 1dqv_A 150 -----------------------------TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTL 200 (296)
T ss_dssp -----------------------------TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCS
T ss_pred -----------------------------ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCC
Confidence 014688999999999999999999999999996 2 457999999999
Q ss_pred CCeeeeEEEEeecCC--CCcEEEEEEEeCC-CCCCceeEEEEEEceecCC-C-------CCCCCCCCCeEEEeecCCC
Q 045058 314 NPQWHQVFAFSRDRM--QASVLEVVIKDKD-LVKDDFVGIVRFDINEVPL-R-------VPPDSPLAPEWYRLEDKKG 380 (1005)
Q Consensus 314 nP~wne~f~f~~~~~--~~~~l~v~V~d~~-~~~d~~lG~~~i~l~~l~~-~-------~~~~~~~~~~w~~L~~~~~ 380 (1005)
||.|||.|.|.+... ....|.|+|||++ ++++++||++.+++..+.. + .........+|+.|....+
T Consensus 201 nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~~~~ 278 (296)
T 1dqv_A 201 NPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVEEKT 278 (296)
T ss_dssp SCEEEECCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBBCC-
T ss_pred CCeECceEEEEcCHHHccCcEEEEEEEeCCCCCCCceEEEEEECCccCCchhHHHHHHHHhCCCCceeEeeeccCccc
Confidence 999999999987543 3457999999999 7889999999999987632 0 0001234567888776554
No 4
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.96 E-value=1.4e-29 Score=276.48 Aligned_cols=244 Identities=28% Similarity=0.373 Sum_probs=195.1
Q ss_pred cceeeeccccceeEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeeeeeeeecCCCCCeeeeEEEEeec--CCCCcE
Q 045058 258 KTASTYDLVERMYFLYVRVVKARELPAMDLTGSIDPFVEVKI---GNYKGITKHYEKNQNPQWHQVFAFSRD--RMQASV 332 (1005)
Q Consensus 258 ~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~---~~~~~kT~~~~~~~nP~wne~f~f~~~--~~~~~~ 332 (1005)
.++..|+. ..+.|.|+|++|++|+.++.+|.+||||++++ +.+.++|+++++++||.|||+|.|.+. ++....
T Consensus 10 ~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~ 87 (296)
T 1dqv_A 10 SFALRYLY--GSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRK 87 (296)
T ss_dssp EEEEECCS--SSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCC
T ss_pred EEEEEEeC--CCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCE
Confidence 44555544 45899999999999999999999999999999 446789999999999999999999975 334568
Q ss_pred EEEEEEeCC-CCCCceeEEEEEE-ceecCCCCCCCCCCCCeEEEeecCCCCc-cceEEEEEEEEeccCCcccccccCCCC
Q 045058 333 LEVVIKDKD-LVKDDFVGIVRFD-INEVPLRVPPDSPLAPEWYRLEDKKGEK-IKGELMLAVWIGTQADEAFSDAWHSDA 409 (1005)
Q Consensus 333 l~v~V~d~~-~~~d~~lG~~~i~-l~~l~~~~~~~~~~~~~w~~L~~~~~~~-~~G~i~l~~~~~~~~d~~~~~~~~~~~ 409 (1005)
|.|+|||++ ++++++||++.++ +.++... ......|+.|....+.. ..|+|.+++.|.+.
T Consensus 88 L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~----~~~~~~w~~L~~~~~~~~~~G~i~vsl~y~~~------------- 150 (296)
T 1dqv_A 88 LHFSVYDFDRFSRHDLIGQVVLDNLLELAEQ----PPDRPLWRDILEGGSEKADLGELNFSLCYLPT------------- 150 (296)
T ss_dssp CEEEEEECCSSSCCCEEEEEECCCTTGGGSS----CSSCCCCEECBCCSSCCSCCCEEEEEEEEETT-------------
T ss_pred EEEEEEEcCCCCCCceEEEEEeccccccccC----CccceeeeccccccccccccceEEEEEEeccc-------------
Confidence 999999999 7889999999996 4444321 12356799998754332 57999999886431
Q ss_pred CCCCCCCCccccccccccccCCceEEEEEEEEEeeeCCCCCCCCCCCcEEEEEEC--C---eEEeeecccCCCCCccccc
Q 045058 410 ATPVDSTPAITAVIRSKVYHSPRLWYVRVNVVEAQDLVPTEKNHFPDVYVKAQIG--N---QVLKTKICQARTLSAVWNE 484 (1005)
Q Consensus 410 ~~~~~~~~~~~~~~r~~~~~~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~lg--~---~~~kT~~~~~~t~~P~w~e 484 (1005)
.+.|.|.|++|+||+.++..|.+||||+++++ + .+++|++++ ++.||.|||
T Consensus 151 -----------------------~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~-~t~nP~wne 206 (296)
T 1dqv_A 151 -----------------------AGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKK-NTLNPTYNE 206 (296)
T ss_dssp -----------------------TTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCC-SCSSCEEEE
T ss_pred -----------------------cceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceec-CCCCCeECc
Confidence 23799999999999999999999999999995 2 578999996 999999999
Q ss_pred EEEEEeeCC--CCCeEEEEEEeccCCCCCceeEEEEEcccccccc----c-----ccccccceeEEccCCC
Q 045058 485 DLLFVAAEP--FEDHLVLTVEDRVGPGKDEIIGRVIIPLSAIEKR----A-----DERIIHSRWFNLEKPV 544 (1005)
Q Consensus 485 ~f~f~v~~~--~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~----~-----~~~~~~~~w~~L~~~~ 544 (1005)
.|.|.+... ....|.|+|||++.++++++||++.|++..+... | ..+....+|++|....
T Consensus 207 ~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~~~ 277 (296)
T 1dqv_A 207 ALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVEEK 277 (296)
T ss_dssp CCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBBCC
T ss_pred eEEEEcCHHHccCcEEEEEEEeCCCCCCCceEEEEEECCccCCchhHHHHHHHHhCCCCceeEeeeccCcc
Confidence 999998654 2457999999999999999999999999876431 1 0123455677766554
No 5
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.82 E-value=3e-19 Score=173.26 Aligned_cols=122 Identities=29% Similarity=0.461 Sum_probs=107.2
Q ss_pred CCcEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEeCCCC-
Q 045058 2 RNLKLGVQVVGAHNLLPKDGKGSSSAFVELYFDGQRFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYNNIGD- 80 (1005)
Q Consensus 2 ~~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~~~~- 80 (1005)
..+.|+|+|++|+||+.+|..|.+||||++++++++++|+++++++||+|||+|.|.+...+ ..|.|+|||++..
T Consensus 15 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~----~~l~~~v~d~d~~~ 90 (148)
T 3kwu_A 15 WSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSS----DRIKVRVLDEDDDI 90 (148)
T ss_dssp CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTT----CEEEEEEEECCCSH
T ss_pred cccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCC----CEEEEEEEECCCCc
Confidence 35899999999999999999999999999999999999999999999999999999997654 5899999999643
Q ss_pred ---------CCCCcccEEEEEeCCcccCCCCceeeeEecccCCCcceeeeEEEEEEEEe
Q 045058 81 ---------TNSRSFLGKVCLTGNSFVPLSDSVVLHYPLEKRGIFSHVRGELGLKVYIT 130 (1005)
Q Consensus 81 ---------~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~ 130 (1005)
.++|++||++.|++.++. .....||+|.+++..+..+|+|+|++.+.
T Consensus 91 ~~~~~~~~~~~~~~~lG~~~i~l~~l~---~~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 91 KSRVKQRFKRESDDFLGQTIIEVRTLS---GEMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHHHHTTTSSCSSEEEEEEEEEGGGCC---SEEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred cccccccccCCCCccEEEEEEEHHHCc---CCCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 258999999999999983 23458999998876667889999999875
No 6
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=5.2e-19 Score=169.87 Aligned_cols=126 Identities=19% Similarity=0.236 Sum_probs=106.8
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEeCCCCCC
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYFDGQRFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYNNIGDTN 82 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~~~~~~ 82 (1005)
.+.|.|+|++|+||+.++. |.+||||+|++++++++|+++++++||+|||+|.|.+...+......|.|+|||++. .+
T Consensus 6 ~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~-~~ 83 (140)
T 2dmh_A 6 SGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFET-IG 83 (140)
T ss_dssp CCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTC-SS
T ss_pred CcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCC-CC
Confidence 4799999999999999998 999999999999999999999999999999999999975432235789999999954 56
Q ss_pred CCcccEEEEEeCCcccCCCCceeeeEe---cccCCCcceeeeEEEEEEEEecC
Q 045058 83 SRSFLGKVCLTGNSFVPLSDSVVLHYP---LEKRGIFSHVRGELGLKVYITDD 132 (1005)
Q Consensus 83 ~d~~lG~~~i~l~~l~~~~~~~~~w~~---L~~~~~~~~~~G~i~l~~~~~~~ 132 (1005)
+|++||++.|++.++..... ...|++ |.+... ...+|+|++++.|.+.
T Consensus 84 ~~~~lG~~~i~l~~l~~~~~-~~~w~~l~~l~~~~~-~~~~G~l~l~~~~~p~ 134 (140)
T 2dmh_A 84 QNKLIGTATVALKDLTGDQS-RSLPYKLISLLNEKG-QDTGATIDLVIGYDPP 134 (140)
T ss_dssp SCCCCEEEEEEGGGTCSSSC-EEEEEEEEEEECTTC-CEEEEEEEEEEEECCC
T ss_pred CCceEEEEEEEHHHhccCCC-ceeEEeeeeccCCCC-CCCCCEEEEEEEEECC
Confidence 89999999999999876554 357987 655443 2568999999999873
No 7
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.81 E-value=1.1e-19 Score=172.72 Aligned_cols=122 Identities=28% Similarity=0.452 Sum_probs=108.4
Q ss_pred CcceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEECCEEEEeeeccCCCCceeccEEEEEEeCCCceEEEEEEeCCCcC
Q 045058 593 PSIGILELGILNAVGLHPMKTRDGRGTSDTYCVAKYGHKWVRTRTLVDNLSPKYNEQYTWEVFDPATVLTVGVFDNSQLG 672 (1005)
Q Consensus 593 ~~~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~g~~~~~T~~~~~t~nP~wne~f~~~v~~~~~~l~i~v~d~~~~~ 672 (1005)
...|.|+|+|++|+||++++ ..|.+||||++.++++.+||+++++++||+|||+|.|++.++...|.|+|||++.++
T Consensus 10 ~~~~~L~v~v~~a~~L~~~d---~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~~~ 86 (133)
T 2ep6_A 10 KDVGILQVKVLKAADLLAAD---FSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGDK 86 (133)
T ss_dssp CCSEEEEEEEEEEESCCCSS---SSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEETTE
T ss_pred CCceEEEEEEEeeECCCCCC---CCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECCCCC
Confidence 56799999999999999754 578899999999999999999999999999999999999988889999999999766
Q ss_pred CCCCCCCCcccEEEEEEcccccCCCEEeeeEeeeecCCCCCceeeEEEEEEEEe
Q 045058 673 EKSNGNKDLKIGKVRIRISTLETGRIYTHSYPLLVLHPTGVKKMGELHLAIRFS 726 (1005)
Q Consensus 673 ~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~G~i~l~~~~~ 726 (1005)
+|++||.+.|+|.++..+. .+||+|......+ ...|+|+|+++|.
T Consensus 87 ------~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~~-~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 87 ------PPDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQ-AFKGVIYLEMDLI 131 (133)
T ss_dssp ------EEEECCBCEEEGGGCCSSC--CEECCCBCSCTTS-CCSSEEEEEEEEE
T ss_pred ------CCCeeEEEEEEHHHccCCC--ceEEEeecCCCCC-ccceEEEEEEEEE
Confidence 7999999999999998776 5899998655443 3569999999984
No 8
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.80 E-value=1.9e-19 Score=171.18 Aligned_cols=122 Identities=29% Similarity=0.389 Sum_probs=107.3
Q ss_pred CCcEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEeCCCCC
Q 045058 2 RNLKLGVQVVGAHNLLPKDGKGSSSAFVELYFDGQRFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYNNIGDT 81 (1005)
Q Consensus 2 ~~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~~~~~ 81 (1005)
+.+.|+|+|++|++|+.++..|.+||||+|++++++++|+++++++||+|||+|.|.+.+.. ..|.|+|||++. .
T Consensus 11 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~----~~l~i~V~d~d~-~ 85 (133)
T 2ep6_A 11 DVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIH----DVLEVTVFDEDG-D 85 (133)
T ss_dssp CSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTT----CEEEEEEEEEET-T
T ss_pred CceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCC----CEEEEEEEECCC-C
Confidence 45899999999999999999999999999999999999999999999999999999997543 589999999954 4
Q ss_pred CCCcccEEEEEeCCcccCCCCceeeeEecccCCCcceeeeEEEEEEEEec
Q 045058 82 NSRSFLGKVCLTGNSFVPLSDSVVLHYPLEKRGIFSHVRGELGLKVYITD 131 (1005)
Q Consensus 82 ~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~~ 131 (1005)
++|++||++.+++.++.... ..||+|..+......+|+|++++.+..
T Consensus 86 ~~~~~lG~~~i~l~~l~~~~---~~w~~L~~~~~~~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 86 KPPDFLGKVAIPLLSIRDGQ---PNCYVLKNKDLEQAFKGVIYLEMDLIY 132 (133)
T ss_dssp EEEEECCBCEEEGGGCCSSC---CEECCCBCSCTTSCCSSEEEEEEEEEE
T ss_pred CCCCeeEEEEEEHHHccCCC---ceEEEeecCCCCCccceEEEEEEEEEe
Confidence 57999999999999986543 369999987655578999999998864
No 9
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.80 E-value=3e-19 Score=172.18 Aligned_cols=119 Identities=24% Similarity=0.323 Sum_probs=102.3
Q ss_pred CcceEEEEEEEEecCCCCCCCCC-------CCCCCCcEEEEEECCEE-EEeeeccCCCCceeccEEEEEEeCCCceEEEE
Q 045058 593 PSIGILELGILNAVGLHPMKTRD-------GRGTSDTYCVAKYGHKW-VRTRTLVDNLSPKYNEQYTWEVFDPATVLTVG 664 (1005)
Q Consensus 593 ~~~g~l~v~i~~a~~L~~~~~~~-------~~~~~dpyv~~~~g~~~-~~T~~~~~t~nP~wne~f~~~v~~~~~~l~i~ 664 (1005)
...|.|+|+|++|+||+++|... ..|.+||||++.+++.. .||+++++|+||+|||.|.|.+.+ ...|.|+
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~-~~~L~~~ 104 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD-GGHLELA 104 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE-ECEEEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC-CCEEEEE
Confidence 45799999999999999875210 13679999999999876 699999999999999999999876 4589999
Q ss_pred EEeCCCcCCCCCCCCCcccEEEEEEcccccCC----CEEeeeEeeeecCCCCCceeeEEEEEEEEe
Q 045058 665 VFDNSQLGEKSNGNKDLKIGKVRIRISTLETG----RIYTHSYPLLVLHPTGVKKMGELHLAIRFS 726 (1005)
Q Consensus 665 v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~----~~~~~~~~L~~~~~~~~~~~G~i~l~~~~~ 726 (1005)
|||+|.++ +|++||++.|+|.++..+ ...+.||+|. ..|+|+|+++|+
T Consensus 105 V~D~d~~~------~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~--------~~G~i~l~l~~~ 156 (157)
T 2fk9_A 105 VFHETPLG------YDHFVANCTLQFQELLRTTGASDTFEGWVDLE--------PEGKVFVVITLT 156 (157)
T ss_dssp EEECCSSS------SCEEEEEEEEEHHHHHHHHTTCSEEEEEEECB--------SSCEEEEEEEEC
T ss_pred EEECCCCC------CCCEEEEEEEEHHHhhcccCCCCcccEEEECC--------CCcEEEEEEEEE
Confidence 99999876 899999999999998865 6789999995 149999999874
No 10
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.80 E-value=1.4e-18 Score=168.47 Aligned_cols=126 Identities=23% Similarity=0.348 Sum_probs=105.1
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEECCEEEEeeeccCCCCceeccEEEEEEeCCCceEEEEEEeCCCcC--
Q 045058 595 IGILELGILNAVGLHPMKTRDGRGTSDTYCVAKYGHKWVRTRTLVDNLSPKYNEQYTWEVFDPATVLTVGVFDNSQLG-- 672 (1005)
Q Consensus 595 ~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~g~~~~~T~~~~~t~nP~wne~f~~~v~~~~~~l~i~v~d~~~~~-- 672 (1005)
.|.|+|+|++|+||++++ ..|.+||||++.+++..++|+++++++||+|||.|.|.+..+...|.|+|||++...
T Consensus 16 ~~~L~V~v~~a~~L~~~d---~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~~~ 92 (148)
T 3kwu_A 16 SAKISITVVCAQGLQAKD---KTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDIKS 92 (148)
T ss_dssp CEEEEEEEEEEESCCCCS---TTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSHHH
T ss_pred ccEEEEEEEeeeCCCCCC---CCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCccc
Confidence 599999999999999754 478899999999999999999999999999999999999988889999999998640
Q ss_pred ---CCCCCCCCcccEEEEEEcccccCCCEEeeeEeeeecCCCCCceeeEEEEEEEEe
Q 045058 673 ---EKSNGNKDLKIGKVRIRISTLETGRIYTHSYPLLVLHPTGVKKMGELHLAIRFS 726 (1005)
Q Consensus 673 ---~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~G~i~l~~~~~ 726 (1005)
.....++|++||.+.|+|+++. .....||+|......+ ...|+|+|+++|+
T Consensus 93 ~~~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~~~~~~-~~~G~i~l~l~~e 146 (148)
T 3kwu_A 93 RVKQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLDKRTDKS-AVSGAIRLHISVE 146 (148)
T ss_dssp HHHTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECBCSSTTC-CCCCEEEEEEEEE
T ss_pred cccccccCCCCccEEEEEEEHHHCc--CCCCEEEEcccCCCCC-CCceEEEEEEEEE
Confidence 0000137999999999999994 3458999998444333 3469999999985
No 11
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=1.4e-18 Score=166.95 Aligned_cols=124 Identities=20% Similarity=0.315 Sum_probs=106.4
Q ss_pred cceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEECCEEEEeeeccCCCCceeccEEEEEEeC----CCceEEEEEEeCC
Q 045058 594 SIGILELGILNAVGLHPMKTRDGRGTSDTYCVAKYGHKWVRTRTLVDNLSPKYNEQYTWEVFD----PATVLTVGVFDNS 669 (1005)
Q Consensus 594 ~~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~g~~~~~T~~~~~t~nP~wne~f~~~v~~----~~~~l~i~v~d~~ 669 (1005)
..|.|+|+|++|+||+.++ . |.+||||+++++++.+||+++++++||+|||.|.|.+.. ....|.|+|||++
T Consensus 5 ~~g~L~v~v~~a~~L~~~~---~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d 80 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTK---F-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFE 80 (140)
T ss_dssp BCCEEEEEEEEEESCCCCS---S-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETT
T ss_pred CCcEEEEEEEEeeCCCCCC---C-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECC
Confidence 4589999999999999754 4 889999999999999999999999999999999999975 3579999999999
Q ss_pred CcCCCCCCCCCcccEEEEEEcccccCCCEEeeeEeeee-cCCCCCceeeEEEEEEEEee
Q 045058 670 QLGEKSNGNKDLKIGKVRIRISTLETGRIYTHSYPLLV-LHPTGVKKMGELHLAIRFSC 727 (1005)
Q Consensus 670 ~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~-~~~~~~~~~G~i~l~~~~~~ 727 (1005)
.++ +|++||.+.|+|.++..+.....||++.. ....+....|+|+|+++|.+
T Consensus 81 ~~~------~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p 133 (140)
T 2dmh_A 81 TIG------QNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDP 133 (140)
T ss_dssp CSS------SCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECC
T ss_pred CCC------CCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEEC
Confidence 876 78999999999999998887889998321 23334445699999999864
No 12
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.79 E-value=9.7e-19 Score=170.73 Aligned_cols=124 Identities=23% Similarity=0.322 Sum_probs=99.9
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eEeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEe
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYFDG------QRFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYN 76 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~~------~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d 76 (1005)
.+.|+|+|++|+||+.+|..|.+||||+|++.+ .+++|+++++++||+|||+|.|.+...+ ..|.|+|||
T Consensus 19 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~----~~l~~~V~d 94 (153)
T 3b7y_A 19 SRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQ----HRLLFEVFD 94 (153)
T ss_dssp CEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTT----CEEEEEEEE
T ss_pred ccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCC----CEEEEEEEE
Confidence 478999999999999999899999999999963 5789999999999999999999997543 589999999
Q ss_pred CCCCCCCCcccEEEEEeCCcccCCCCc-----eeeeEecccCCCcceeeeEEEEEEEEec
Q 045058 77 NIGDTNSRSFLGKVCLTGNSFVPLSDS-----VVLHYPLEKRGIFSHVRGELGLKVYITD 131 (1005)
Q Consensus 77 ~~~~~~~d~~lG~~~i~l~~l~~~~~~-----~~~w~~L~~~~~~~~~~G~i~l~~~~~~ 131 (1005)
++. .++|++||++.|+|.++...... ...||+|.++...+..+|+|++++.|.+
T Consensus 95 ~d~-~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 95 ENR-LTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp CCS-SSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred CCC-CcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEeC
Confidence 954 45899999999999998765542 2479999887655578899999998853
No 13
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.79 E-value=3.6e-19 Score=171.60 Aligned_cols=115 Identities=23% Similarity=0.277 Sum_probs=97.9
Q ss_pred CcEEEEEEEEeecCCCCCC----------CCCCCcEEEEEECCeE-eeccccCCCCCCceeeEEEEEeccCccccceEEE
Q 045058 3 NLKLGVQVVGAHNLLPKDG----------KGSSSAFVELYFDGQR-FRTTIKENDLNPVWNESFYFNISDASKLHYLTLE 71 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~----------~g~~dpyv~v~~~~~~-~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~ 71 (1005)
.+.|+|+|++|++|+++|. .|.+||||+|++++++ .||+++++|+||+|||+|.|.+.+. ..|.
T Consensus 28 ~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~~-----~~L~ 102 (157)
T 2fk9_A 28 NGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTDG-----GHLE 102 (157)
T ss_dssp EEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-----CEEE
T ss_pred ccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCCC-----CEEE
Confidence 4789999999999999883 3679999999999875 7999999999999999999998642 4899
Q ss_pred EEEEeCCCCCCCCcccEEEEEeCCcccCC---CCceeeeEecccCCCcceeeeEEEEEEEEe
Q 045058 72 AYIYNNIGDTNSRSFLGKVCLTGNSFVPL---SDSVVLHYPLEKRGIFSHVRGELGLKVYIT 130 (1005)
Q Consensus 72 v~V~d~~~~~~~d~~lG~~~i~l~~l~~~---~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~ 130 (1005)
|+|||++ ..++|++||++.|++.++... +...+.||+|++ +|+|++++.+.
T Consensus 103 ~~V~D~d-~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~-------~G~i~l~l~~~ 156 (157)
T 2fk9_A 103 LAVFHET-PLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP-------EGKVFVVITLT 156 (157)
T ss_dssp EEEEECC-SSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS-------SCEEEEEEEEC
T ss_pred EEEEECC-CCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC-------CcEEEEEEEEE
Confidence 9999985 456899999999999998653 345578999964 58999998764
No 14
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.79 E-value=6.5e-19 Score=168.29 Aligned_cols=123 Identities=21% Similarity=0.327 Sum_probs=108.0
Q ss_pred CcceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEECCEEEEeeecc-CCCCceeccEEEEEEeCCCceEEEEEEeCCCc
Q 045058 593 PSIGILELGILNAVGLHPMKTRDGRGTSDTYCVAKYGHKWVRTRTLV-DNLSPKYNEQYTWEVFDPATVLTVGVFDNSQL 671 (1005)
Q Consensus 593 ~~~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~g~~~~~T~~~~-~t~nP~wne~f~~~v~~~~~~l~i~v~d~~~~ 671 (1005)
...|.|+|+|++|+||++++ ..|.+||||++++++..+||++++ +++||+|||.|.|.+.+....|.|+|||++.+
T Consensus 7 ~~~~~L~v~v~~a~~L~~~d---~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~~ 83 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDAD---FLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVG 83 (136)
T ss_dssp CCEEEEEEEEEEEEECSSCC---SSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSC
T ss_pred CCcEEEEEEEEeccCCCCcc---cCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCCC
Confidence 45799999999999999754 468899999999999899999998 89999999999999998888999999999977
Q ss_pred CCCCCCCCCcccEEEEEEcccc-cCCCEEeeeEeeeecCCCCCceeeEEEEEEEEeec
Q 045058 672 GEKSNGNKDLKIGKVRIRISTL-ETGRIYTHSYPLLVLHPTGVKKMGELHLAIRFSCT 728 (1005)
Q Consensus 672 ~~~~~~~~d~~lG~~~i~l~~l-~~~~~~~~~~~L~~~~~~~~~~~G~i~l~~~~~~~ 728 (1005)
+ +|++||.+.|+|+++ ..+.....||+|. .+.+..|+|+|+++|.+.
T Consensus 84 ~------~d~~lG~~~i~l~~l~~~~~~~~~w~~L~----~~~~~~G~i~l~l~~~p~ 131 (136)
T 1wfj_A 84 T------EDDAVGEATIPLEPVFVEGSIPPTAYNVV----KDEEYKGEIWVALSFKPS 131 (136)
T ss_dssp T------TTCCSEEEEEESHHHHHHSEEEEEEEEEE----ETTEEEEEEEEEEEEEEC
T ss_pred C------CCceEEEEEEEHHHhccCCCCCcEEEEee----cCCccCEEEEEEEEEEeC
Confidence 6 899999999999999 5566668899997 123456999999999754
No 15
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.79 E-value=5.5e-19 Score=168.79 Aligned_cols=122 Identities=20% Similarity=0.283 Sum_probs=106.5
Q ss_pred CCcEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeeccccC-CCCCCceeeEEEEEeccCccccceEEEEEEEeCCCC
Q 045058 2 RNLKLGVQVVGAHNLLPKDGKGSSSAFVELYFDGQRFRTTIKE-NDLNPVWNESFYFNISDASKLHYLTLEAYIYNNIGD 80 (1005)
Q Consensus 2 ~~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~T~v~~-~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~~~~ 80 (1005)
+.+.|+|+|++|++|+.++..|.+||||+|++++++++|++++ +++||+|||+|.|.+.+. ...|.|+|||++ .
T Consensus 8 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~----~~~l~~~V~d~~-~ 82 (136)
T 1wfj_A 8 PHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEG----TTELKAKIFDKD-V 82 (136)
T ss_dssp CEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESS----CCEEEEEECCSS-S
T ss_pred CcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCC----CCEEEEEEEECC-C
Confidence 4589999999999999999999999999999999999999998 899999999999999753 358999999995 4
Q ss_pred CCCCcccEEEEEeCCcccCCCCceeeeEecccCCCcceeeeEEEEEEEEec
Q 045058 81 TNSRSFLGKVCLTGNSFVPLSDSVVLHYPLEKRGIFSHVRGELGLKVYITD 131 (1005)
Q Consensus 81 ~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~~ 131 (1005)
.++|++||++.|+|.++...+.....||+|.+. ...+|+|++++.|.+
T Consensus 83 ~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~---~~~~G~i~l~l~~~p 130 (136)
T 1wfj_A 83 GTEDDAVGEATIPLEPVFVEGSIPPTAYNVVKD---EEYKGEIWVALSFKP 130 (136)
T ss_dssp CTTTCCSEEEEEESHHHHHHSEEEEEEEEEEET---TEEEEEEEEEEEEEE
T ss_pred CCCCceEEEEEEEHHHhccCCCCCcEEEEeecC---CccCEEEEEEEEEEe
Confidence 568999999999999985545445689999832 368999999999987
No 16
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.78 E-value=1.4e-18 Score=173.64 Aligned_cols=124 Identities=23% Similarity=0.312 Sum_probs=101.1
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eEeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEe
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYFDG------QRFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYN 76 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~~------~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d 76 (1005)
.+.|+|+|++|++|+.++..|.+||||+|++.+ .+++|+++++++||+|||+|.|.+.... ..|.|+|||
T Consensus 7 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~----~~L~~~V~d 82 (176)
T 3m7f_B 7 TRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQR----HRILFEVFD 82 (176)
T ss_dssp CEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTT----CEEEEEEEE
T ss_pred cEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCC----CEEEEEEEE
Confidence 489999999999999999999999999999975 5789999999999999999999997543 589999999
Q ss_pred CCCCCCCCcccEEEEEeCCcccCCCCcee-----eeEecccCCCcceeeeEEEEEEEEec
Q 045058 77 NIGDTNSRSFLGKVCLTGNSFVPLSDSVV-----LHYPLEKRGIFSHVRGELGLKVYITD 131 (1005)
Q Consensus 77 ~~~~~~~d~~lG~~~i~l~~l~~~~~~~~-----~w~~L~~~~~~~~~~G~i~l~~~~~~ 131 (1005)
++. .++|+|||++.|+|.++.......+ .||+|.++...++.+|+|+|++.|.+
T Consensus 83 ~d~-~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p 141 (176)
T 3m7f_B 83 ENR-LTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 141 (176)
T ss_dssp CC-----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred CCC-CCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEe
Confidence 954 4589999999999999977654322 69999988666678999999999987
No 17
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.77 E-value=2.3e-18 Score=168.05 Aligned_cols=124 Identities=24% Similarity=0.358 Sum_probs=101.0
Q ss_pred CcceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEECC------EEEEeeeccCCCCceeccEEEEEEeCCCceEEEEEE
Q 045058 593 PSIGILELGILNAVGLHPMKTRDGRGTSDTYCVAKYGH------KWVRTRTLVDNLSPKYNEQYTWEVFDPATVLTVGVF 666 (1005)
Q Consensus 593 ~~~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~g~------~~~~T~~~~~t~nP~wne~f~~~v~~~~~~l~i~v~ 666 (1005)
+..|.|+|+|++|+||++++ ..|.+||||++.+++ ..+||+++++++||+|||.|.|.+......|.|+||
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d---~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~ 93 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKD---ILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVF 93 (153)
T ss_dssp TTCEEEEEEEEEEESCC----------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEE
T ss_pred CCccEEEEEEEEeeCCCCCC---CCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEEE
Confidence 56799999999999999754 468899999999963 578999999999999999999999887889999999
Q ss_pred eCCCcCCCCCCCCCcccEEEEEEcccccCCCE------EeeeEeeeecCCCCCceeeEEEEEEEEe
Q 045058 667 DNSQLGEKSNGNKDLKIGKVRIRISTLETGRI------YTHSYPLLVLHPTGVKKMGELHLAIRFS 726 (1005)
Q Consensus 667 d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~------~~~~~~L~~~~~~~~~~~G~i~l~~~~~ 726 (1005)
|++.++ +|++||.+.|+|.++..+.. ...||+|......+ +..|+|+|+++|.
T Consensus 94 d~d~~~------~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~-~~~G~i~l~l~~~ 152 (153)
T 3b7y_A 94 DENRLT------RDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKS-RVKGYLRLKMTYL 152 (153)
T ss_dssp ECCSSS------CCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTC-CCCSEEEEEEEEC
T ss_pred ECCCCc------CCCeeEEEEEEHHHcccCCCcccccccccccccccccCCC-CcceEEEEEEEEe
Confidence 999876 89999999999999877652 24899997554333 3469999999984
No 18
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.77 E-value=2.5e-18 Score=163.12 Aligned_cols=122 Identities=25% Similarity=0.358 Sum_probs=101.0
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEECC--eEeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEeCCCC
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYFDG--QRFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYNNIGD 80 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~~--~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~~~~ 80 (1005)
...|+|+|++|++|..+|..|.+||||+|++++ ++++|+++++|+||+|||+|.|.+...+ .|.|+|||++..
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-----~l~~~v~d~d~~ 78 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTD-----SITISVWNHKKI 78 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETTC-----CEEEEEEEGGGT
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCCC-----EEEEEEEECCCC
Confidence 368999999999999999999999999999975 7899999999999999999999996643 499999999654
Q ss_pred CC--CCcccEEEEEeCCcccCCCCceeeeEecccC--CCcceeeeEEEEEEEE
Q 045058 81 TN--SRSFLGKVCLTGNSFVPLSDSVVLHYPLEKR--GIFSHVRGELGLKVYI 129 (1005)
Q Consensus 81 ~~--~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~--~~~~~~~G~i~l~~~~ 129 (1005)
.. .|+|||++.|++.++.........|++|.+. ......+|+|++++..
T Consensus 79 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 79 HKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp TSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 31 2899999999998884443333478999876 3334578999999864
No 19
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.76 E-value=2.5e-18 Score=163.94 Aligned_cols=116 Identities=16% Similarity=0.275 Sum_probs=98.8
Q ss_pred CcEEEEEEEEeecCCCCCCCCC-----------CCcEEEEEECCeE-eeccccCCCCCCceeeEEEEEeccCccccceEE
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGS-----------SSAFVELYFDGQR-FRTTIKENDLNPVWNESFYFNISDASKLHYLTL 70 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~-----------~dpyv~v~~~~~~-~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l 70 (1005)
.+.|+|+|++|+||+++|..|. +||||+|++++.+ .+|+++++|+||+|||+|.|.+.+. ..|
T Consensus 5 ~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-----~~L 79 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-----RKI 79 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-----CEE
T ss_pred ceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-----CEE
Confidence 4899999999999998875443 9999999998875 7999999999999999999998653 489
Q ss_pred EEEEEeCCCCCCCCcccEEEEEeCCcccCCC-CceeeeEecccCCCcceeeeEEEEEEEEec
Q 045058 71 EAYIYNNIGDTNSRSFLGKVCLTGNSFVPLS-DSVVLHYPLEKRGIFSHVRGELGLKVYITD 131 (1005)
Q Consensus 71 ~v~V~d~~~~~~~d~~lG~~~i~l~~l~~~~-~~~~~w~~L~~~~~~~~~~G~i~l~~~~~~ 131 (1005)
.|+|||++. .++|++||++.|++.++...+ ...+.|++|++ +|+|++++.+..
T Consensus 80 ~~~V~d~d~-~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~-------~G~i~l~l~~~~ 133 (136)
T 1gmi_A 80 ELAVFHDAP-IGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP-------EGKVYVIIDLSG 133 (136)
T ss_dssp EEEEEECCS-SSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS-------SCEEEEEEEEEE
T ss_pred EEEEEeCCC-CCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC-------CeEEEEEEEEEe
Confidence 999999954 558999999999999987754 33468999964 589999998865
No 20
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.76 E-value=5.2e-18 Score=161.73 Aligned_cols=118 Identities=21% Similarity=0.283 Sum_probs=100.1
Q ss_pred ceEEEEEEEEecCCCCCCCCC--------CCCCCCcEEEEEECCEE-EEeeeccCCCCceeccEEEEEEeCCCceEEEEE
Q 045058 595 IGILELGILNAVGLHPMKTRD--------GRGTSDTYCVAKYGHKW-VRTRTLVDNLSPKYNEQYTWEVFDPATVLTVGV 665 (1005)
Q Consensus 595 ~g~l~v~i~~a~~L~~~~~~~--------~~~~~dpyv~~~~g~~~-~~T~~~~~t~nP~wne~f~~~v~~~~~~l~i~v 665 (1005)
.|.|+|+|++|+||+++|... ..+.+||||++.+++.. .+|+++.+|+||+|||.|.|.+.+. ..|.|+|
T Consensus 5 ~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L~~~V 83 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-RKIELAV 83 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEEEEEE
T ss_pred ceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-CEEEEEE
Confidence 599999999999999765210 01348999999998875 5999999999999999999999876 8999999
Q ss_pred EeCCCcCCCCCCCCCcccEEEEEEcccccCC--CEEeeeEeeeecCCCCCceeeEEEEEEEEee
Q 045058 666 FDNSQLGEKSNGNKDLKIGKVRIRISTLETG--RIYTHSYPLLVLHPTGVKKMGELHLAIRFSC 727 (1005)
Q Consensus 666 ~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~--~~~~~~~~L~~~~~~~~~~~G~i~l~~~~~~ 727 (1005)
||+|.++ +|++||.+.|+|+++..+ ...+.|++|. ..|+|+|+++|..
T Consensus 84 ~d~d~~~------~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~--------~~G~i~l~l~~~~ 133 (136)
T 1gmi_A 84 FHDAPIG------YDDFVANCTIQFEELLQNGSRHFEDWIDLE--------PEGKVYVIIDLSG 133 (136)
T ss_dssp EECCSSS------SCEEEEEEEEEHHHHTSTTCSEEEEEEECB--------SSCEEEEEEEEEE
T ss_pred EeCCCCC------CCCEEEEEEEEHHHhcccCCCCccEEEEcC--------CCeEEEEEEEEEe
Confidence 9999876 899999999999998874 3568899985 2499999999865
No 21
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.75 E-value=7.7e-18 Score=168.27 Aligned_cols=125 Identities=22% Similarity=0.341 Sum_probs=100.5
Q ss_pred CcceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEECC------EEEEeeeccCCCCceeccEEEEEEeCCCceEEEEEE
Q 045058 593 PSIGILELGILNAVGLHPMKTRDGRGTSDTYCVAKYGH------KWVRTRTLVDNLSPKYNEQYTWEVFDPATVLTVGVF 666 (1005)
Q Consensus 593 ~~~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~g~------~~~~T~~~~~t~nP~wne~f~~~v~~~~~~l~i~v~ 666 (1005)
...|.|+|+|++|+||++++ ..|.+||||++.+++ ..++|+++++++||+|||.|.|.+......|.|+||
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d---~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~ 81 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKD---ILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVF 81 (176)
T ss_dssp TTCEEEEEEEEEEESCC------CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEE
T ss_pred CCcEEEEEEEEEeeCCCCcC---CCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEE
Confidence 45699999999999999754 478899999999965 678999999999999999999999977789999999
Q ss_pred eCCCcCCCCCCCCCcccEEEEEEcccccCCCEE-e-----eeEeeeecCCCCCceeeEEEEEEEEee
Q 045058 667 DNSQLGEKSNGNKDLKIGKVRIRISTLETGRIY-T-----HSYPLLVLHPTGVKKMGELHLAIRFSC 727 (1005)
Q Consensus 667 d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~-~-----~~~~L~~~~~~~~~~~G~i~l~~~~~~ 727 (1005)
|++.++ +|++||.+.|+|.++..+... . .||+|.....++. ..|+|+|+++|.+
T Consensus 82 d~d~~~------~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~-~~G~l~l~l~~~p 141 (176)
T 3m7f_B 82 DENRLT------RDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSR-VKGYLRLKMTYLP 141 (176)
T ss_dssp ECC----------CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCC-CCSEEEEEEEECC
T ss_pred ECCCCC------CCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCc-cCEEEEEEEEEEe
Confidence 999876 899999999999999876532 2 7999985544433 4599999999854
No 22
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.75 E-value=4e-18 Score=160.41 Aligned_cols=117 Identities=17% Similarity=0.244 Sum_probs=99.3
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEECC---EEEEeeeccCCCCceeccEEEEEEeC-CCceEEEEEEeCCC
Q 045058 595 IGILELGILNAVGLHPMKTRDGRGTSDTYCVAKYGH---KWVRTRTLVDNLSPKYNEQYTWEVFD-PATVLTVGVFDNSQ 670 (1005)
Q Consensus 595 ~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~g~---~~~~T~~~~~t~nP~wne~f~~~v~~-~~~~l~i~v~d~~~ 670 (1005)
.|.|+|+|++|+||++++..+..|.+||||++++++ ..+||+++++++||+|||.|.|.+.. ....|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 489999999999999753334568899999999975 67999999999999999999999965 46799999999985
Q ss_pred cCCCCCCCCCcccEEEEEEcccccCCCEEeeeEeeeecCCCCCceeeEEEEEEE
Q 045058 671 LGEKSNGNKDLKIGKVRIRISTLETGRIYTHSYPLLVLHPTGVKKMGELHLAIR 724 (1005)
Q Consensus 671 ~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~G~i~l~~~ 724 (1005)
+ +|++||.+.|+|+++..+.....||+|.. ...|.|+++++
T Consensus 82 ~-------~~~~iG~~~i~l~~l~~~~~~~~~~~L~~------~~~g~i~~~le 122 (126)
T 1rlw_A 82 V-------MDETLGTATFTVSSMKVGEKKEVPFIFNQ------VTEMVLEMSLE 122 (126)
T ss_dssp S-------CCEEEEEEEEEGGGSCTTCEEEEEEEETT------TEEEEEEEEEE
T ss_pred C-------CCceeEEEEEEHHHccCCCcEEEEEEcCC------CceEEEEEEEE
Confidence 3 48899999999999999998899999951 23467766665
No 23
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.74 E-value=1e-17 Score=157.58 Aligned_cols=117 Identities=24% Similarity=0.302 Sum_probs=97.4
Q ss_pred CCcEEEEEEEEeecCCCC---CCCCCCCcEEEEEECC---eEeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEE
Q 045058 2 RNLKLGVQVVGAHNLLPK---DGKGSSSAFVELYFDG---QRFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIY 75 (1005)
Q Consensus 2 ~~~~l~V~v~~a~~L~~~---d~~g~~dpyv~v~~~~---~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~ 75 (1005)
+.+.|.|+|++|+||+.+ +..|.+||||+|++++ .+++|+++++++||+|||+|.|.+...+ ...|.|+||
T Consensus 1 S~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~---~~~l~i~V~ 77 (126)
T 1rlw_A 1 SSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQ---ENVLEITLM 77 (126)
T ss_dssp CCEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTS---CCEEEEEEE
T ss_pred CCcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCC---CCEEEEEEE
Confidence 357899999999999984 6678999999999985 6899999999999999999999995433 368999999
Q ss_pred eCCCCCCCCcccEEEEEeCCcccCCCCceeeeEecccCCCcceeeeEEEEEEEE
Q 045058 76 NNIGDTNSRSFLGKVCLTGNSFVPLSDSVVLHYPLEKRGIFSHVRGELGLKVYI 129 (1005)
Q Consensus 76 d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~ 129 (1005)
|++. . +|++||++.++|.++..+. ....|++|.+. ..|+|++++..
T Consensus 78 d~d~-~-~~~~iG~~~i~l~~l~~~~-~~~~~~~L~~~-----~~g~i~~~le~ 123 (126)
T 1rlw_A 78 DANY-V-MDETLGTATFTVSSMKVGE-KKEVPFIFNQV-----TEMVLEMSLEV 123 (126)
T ss_dssp ECCS-S-CCEEEEEEEEEGGGSCTTC-EEEEEEEETTT-----EEEEEEEEEEC
T ss_pred ECCC-C-CCceeEEEEEEHHHccCCC-cEEEEEEcCCC-----ceEEEEEEEEe
Confidence 9964 3 5899999999999987544 44689999863 35777777743
No 24
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.74 E-value=1.4e-17 Score=164.75 Aligned_cols=123 Identities=20% Similarity=0.223 Sum_probs=101.6
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEeCCCCCC
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYFDGQRFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYNNIGDTN 82 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~~~~~~ 82 (1005)
.+.|+|+|++|++|..++..+.+||||+|+++++++||+++++|+||+|||+|.|.+.. ...|.|+|||++. .+
T Consensus 35 ~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~~-----~~~L~~~V~D~d~-~~ 108 (173)
T 2nq3_A 35 KSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTP-----VSKLHFRVWSHQT-LK 108 (173)
T ss_dssp CEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEECT-----TCEEEEEEEECCS-SS
T ss_pred ceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeCC-----CCEEEEEEEECCC-CC
Confidence 46899999999999954444559999999999999999999999999999999999843 3589999999964 45
Q ss_pred CCcccEEEEEeCCcccCCC----CceeeeEecccCCCcceeeeEEEEEEEEec
Q 045058 83 SRSFLGKVCLTGNSFVPLS----DSVVLHYPLEKRGIFSHVRGELGLKVYITD 131 (1005)
Q Consensus 83 ~d~~lG~~~i~l~~l~~~~----~~~~~w~~L~~~~~~~~~~G~i~l~~~~~~ 131 (1005)
+|++||++.++|.++.... .....|++|.+.......+|+|.+++.+..
T Consensus 109 ~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~ 161 (173)
T 2nq3_A 109 SDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQ 161 (173)
T ss_dssp CCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEE
T ss_pred CCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeee
Confidence 8999999999999986432 122569999887544568999999998776
No 25
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.72 E-value=1.1e-17 Score=162.29 Aligned_cols=107 Identities=18% Similarity=0.188 Sum_probs=92.5
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEECC---e---EeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEe
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYFDG---Q---RFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYN 76 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~~---~---~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d 76 (1005)
.+.|+|+|++|+||+++|..|.+||||++++.. . ++||+++++|+||+|||+|.|.+...+ +....|.|+|||
T Consensus 42 ~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~-l~~~~L~~~V~d 120 (155)
T 2z0u_A 42 NKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPA-LHQKTLRVDVCT 120 (155)
T ss_dssp TTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHH-HHHCEEEEEEEE
T ss_pred CCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHH-hCcCEEEEEEEE
Confidence 478999999999999999999999999999954 2 799999999999999999999986432 345689999999
Q ss_pred CCCCCCCCcccEEEEEeCCcccCCCCceeeeEecc
Q 045058 77 NIGDTNSRSFLGKVCLTGNSFVPLSDSVVLHYPLE 111 (1005)
Q Consensus 77 ~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~ 111 (1005)
++. .+++++||++.|+|.++...+.....||+|.
T Consensus 121 ~d~-~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 121 TDR-SHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp ECT-TSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred CCC-CCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 965 4689999999999999975555567899986
No 26
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.72 E-value=4.3e-17 Score=154.58 Aligned_cols=124 Identities=18% Similarity=0.220 Sum_probs=99.1
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEECC--EEEEeeeccCCCCceeccEEEEEEeCCCceEEEEEEeCCCcC
Q 045058 595 IGILELGILNAVGLHPMKTRDGRGTSDTYCVAKYGH--KWVRTRTLVDNLSPKYNEQYTWEVFDPATVLTVGVFDNSQLG 672 (1005)
Q Consensus 595 ~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~g~--~~~~T~~~~~t~nP~wne~f~~~v~~~~~~l~i~v~d~~~~~ 672 (1005)
...|+|+|++|++|+++| ..|.+||||++.+++ +.++|+++++|+||+|||.|.|.+.++. .|.|+|||++.++
T Consensus 4 ~~~L~V~v~~a~~L~~~d---~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~l~~~v~d~d~~~ 79 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKD---FFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTD-SITISVWNHKKIH 79 (132)
T ss_dssp EEEEEEEEEEEESCCCCS---TTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETTC-CEEEEEEEGGGTT
T ss_pred eEEEEEEEEEeECCCCCC---CCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCCC-EEEEEEEECCCCC
Confidence 468999999999999754 578899999999964 7889999999999999999999998764 4999999999775
Q ss_pred CCCCCCCCcccEEEEEEccccc-CCCEEeeeEeeeecCCCC-CceeeEEEEEEEE
Q 045058 673 EKSNGNKDLKIGKVRIRISTLE-TGRIYTHSYPLLVLHPTG-VKKMGELHLAIRF 725 (1005)
Q Consensus 673 ~~~~~~~d~~lG~~~i~l~~l~-~~~~~~~~~~L~~~~~~~-~~~~G~i~l~~~~ 725 (1005)
....|++||.+.|+++++. .......|++|....+.+ ....|+|+++++.
T Consensus 80 ---~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 80 ---KKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp ---SSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred ---CCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 1123899999999999882 222224789997653322 2347999998864
No 27
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.71 E-value=3.5e-17 Score=154.62 Aligned_cols=106 Identities=22% Similarity=0.426 Sum_probs=88.6
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEeC
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYF-----DGQRFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYNN 77 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~-----~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~ 77 (1005)
.+.|.|+|++|+||+.++..|.+||||+|++ +..+++|+++++++||+|||+|.|.+...+.+....|.|+|||+
T Consensus 17 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~ 96 (129)
T 2bwq_A 17 GHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQ 96 (129)
T ss_dssp TTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEEC
Confidence 4789999999999999999999999999999 45689999999999999999999996443444567999999999
Q ss_pred CCCCCC--CcccEEEEEeCCcccCCCCceeeeEecc
Q 045058 78 IGDTNS--RSFLGKVCLTGNSFVPLSDSVVLHYPLE 111 (1005)
Q Consensus 78 ~~~~~~--d~~lG~~~i~l~~l~~~~~~~~~w~~L~ 111 (1005)
+.. ++ |++||++.+++.++...+ ...||+|+
T Consensus 97 d~~-~~~~~~~lG~~~i~l~~l~~~~--~~~W~~Lq 129 (129)
T 2bwq_A 97 ARV-REEESEFLGEILIELETALLDD--EPHWYKLQ 129 (129)
T ss_dssp --------CEEEEEEEEEGGGCCCSS--CEEEEECC
T ss_pred CcC-cCcCCceeEEEEEEccccCCCc--CCccEECc
Confidence 654 44 999999999999987654 46899985
No 28
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.71 E-value=5.6e-17 Score=153.89 Aligned_cols=108 Identities=21% Similarity=0.330 Sum_probs=90.0
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEeeccccCCCCCCceeeEEEEE-eccCccccceEEEEEEEe
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYF-----DGQRFRTTIKENDLNPVWNESFYFN-ISDASKLHYLTLEAYIYN 76 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~-----~~~~~~T~v~~~t~nP~Wne~f~f~-v~~~~~~~~~~l~v~V~d 76 (1005)
.+.|.|+|++|+||+. +..|.+||||+|++ +..++||+++++|+||+|||+|.|. +... .+....|.|+|||
T Consensus 19 ~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~-~l~~~~L~~~V~d 96 (134)
T 2b3r_A 19 NGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKE-TLRQRELQLSVLS 96 (134)
T ss_dssp TTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHH-HHTTCEEEEEEEE
T ss_pred CCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHH-HhCcCEEEEEEEE
Confidence 4789999999999997 77889999999998 3468999999999999999999999 6532 2345689999999
Q ss_pred CCCCCCCCcccEEEEEeCCcccCCCCceeeeEecccCC
Q 045058 77 NIGDTNSRSFLGKVCLTGNSFVPLSDSVVLHYPLEKRG 114 (1005)
Q Consensus 77 ~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~ 114 (1005)
++. .++|++||++.|+|.++..... ...||+|.+++
T Consensus 97 ~d~-~~~~~~lG~~~i~l~~l~~~~~-~~~W~~L~~~~ 132 (134)
T 2b3r_A 97 AES-LRENFFLGGITLPLKDFNLSKE-TVKWYQLTAAT 132 (134)
T ss_dssp CCS-SSCCEEEEEEEEEGGGSCTTSC-EEEEEECBC--
T ss_pred CCC-CCCCcEEEEEEEEhhhccCCCC-cceeEECCCcc
Confidence 964 5589999999999999976543 46899998754
No 29
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=5e-17 Score=156.09 Aligned_cols=111 Identities=25% Similarity=0.348 Sum_probs=94.2
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---CeEeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEeCCC
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYFD---GQRFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYNNIG 79 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~---~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~~~ 79 (1005)
.+.|+|+|++|+||+.++..|.+||||+|++. .++++|+++++++||+|||+|.|.+...+.+....|.|+|||++.
T Consensus 25 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~ 104 (141)
T 2d8k_A 25 ESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDR 104 (141)
T ss_dssp SCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCS
T ss_pred CCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCC
Confidence 47899999999999999999999999999994 458999999999999999999999643333345689999999964
Q ss_pred CCCCCcccEEEEEeCCcccCCCCceeeeEecccCCC
Q 045058 80 DTNSRSFLGKVCLTGNSFVPLSDSVVLHYPLEKRGI 115 (1005)
Q Consensus 80 ~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~ 115 (1005)
.++|++||++.|++.++.... ....||+|.+.+.
T Consensus 105 -~~~~~~iG~~~i~l~~l~~~~-~~~~W~~L~~~~~ 138 (141)
T 2d8k_A 105 -FSRNDPIGEVSIPLNKVDLTQ-MQTFWKDLKPSGP 138 (141)
T ss_dssp -SSSCEEEEEEEEETTTSCTTS-CEEEEECCEECCC
T ss_pred -CCCCcEEEEEEEEhhhhcCCC-CccEEEECcCCCC
Confidence 458999999999999997755 4468999988753
No 30
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.70 E-value=5.4e-17 Score=156.00 Aligned_cols=110 Identities=21% Similarity=0.407 Sum_probs=93.6
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEeC
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYF-----DGQRFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYNN 77 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~-----~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~ 77 (1005)
.+.|.|+|++|++|+.++..|.+||||+|++ +..+++|+++++++||+|||+|.|.+...+.+....|.|+|||+
T Consensus 20 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~ 99 (141)
T 1v27_A 20 GHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQ 99 (141)
T ss_dssp TTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEB
T ss_pred CCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEEC
Confidence 4789999999999999999999999999998 35689999999999999999999996443445567999999999
Q ss_pred CCCCCC--CcccEEEEEeCCcccCCCCceeeeEecccCCC
Q 045058 78 IGDTNS--RSFLGKVCLTGNSFVPLSDSVVLHYPLEKRGI 115 (1005)
Q Consensus 78 ~~~~~~--d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~ 115 (1005)
+.. +. |++||++.|+|.++...+ ...||+|.+...
T Consensus 100 d~~-~~~~~~~lG~~~i~l~~l~~~~--~~~W~~L~~~~~ 136 (141)
T 1v27_A 100 ARV-REEESEFLGEILIELETALLDD--EPHWYKLQTHDS 136 (141)
T ss_dssp CSS-SSCCBCCCEEEEEEGGGCCCSS--EEEEEECBCCSS
T ss_pred CCC-cCCCCceEEEEEEEccccCCCC--CCceEECccccc
Confidence 654 34 999999999999986644 568999987643
No 31
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.69 E-value=1.9e-16 Score=151.42 Aligned_cols=110 Identities=15% Similarity=0.250 Sum_probs=93.5
Q ss_pred CcEEEEEEEEeecCCCCCCC-CCCCcEEEEEEC---CeEeeccccCCCCCCceeeEEEEE-eccCccccceEEEEEEEeC
Q 045058 3 NLKLGVQVVGAHNLLPKDGK-GSSSAFVELYFD---GQRFRTTIKENDLNPVWNESFYFN-ISDASKLHYLTLEAYIYNN 77 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~-g~~dpyv~v~~~---~~~~~T~v~~~t~nP~Wne~f~f~-v~~~~~~~~~~l~v~V~d~ 77 (1005)
.+.|.|+|++|+||+.+|.. |.+||||+|++. .++++|+++++++||+|||+|.|. +.. +.+....|.|+|||+
T Consensus 21 ~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~-~~~~~~~l~i~V~d~ 99 (138)
T 1ugk_A 21 RKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPY-TQIQELALHFTILSF 99 (138)
T ss_dssp GTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCS-TTGGGCEEEEEEEEE
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCH-HHhccCEEEEEEEEC
Confidence 47899999999999999985 899999999995 368999999999999999999997 543 234557899999999
Q ss_pred CCCCCCCcccEEEEEeCCcccCCCCceeeeEecccCC
Q 045058 78 IGDTNSRSFLGKVCLTGNSFVPLSDSVVLHYPLEKRG 114 (1005)
Q Consensus 78 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~ 114 (1005)
+. .++|++||++.|+|.++.........|++|.++.
T Consensus 100 d~-~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~~ 135 (138)
T 1ugk_A 100 DR-FSRDDIIGEVLIPLSGIELSEGKMLMNREIISGP 135 (138)
T ss_dssp CS-SCCCCCCEEEEEECTTCCCTTCCEEEEEECBSSS
T ss_pred CC-CCCCcEEEEEEEehhHccCCCCcchhhhhhhcCC
Confidence 64 5689999999999999977665555679998764
No 32
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.69 E-value=1.2e-16 Score=151.47 Aligned_cols=103 Identities=14% Similarity=0.237 Sum_probs=91.3
Q ss_pred cceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEE-----CCEEEEeeeccCCCCceeccEEEEE-EeC---CCceEEEE
Q 045058 594 SIGILELGILNAVGLHPMKTRDGRGTSDTYCVAKY-----GHKWVRTRTLVDNLSPKYNEQYTWE-VFD---PATVLTVG 664 (1005)
Q Consensus 594 ~~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~-----g~~~~~T~~~~~t~nP~wne~f~~~-v~~---~~~~l~i~ 664 (1005)
..|.|.|+|++|+||+. +..|.+||||++++ +....||+++++|+||+|||+|.|. +.. ....|.|+
T Consensus 18 ~~~~L~V~V~~a~~L~~----~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~ 93 (134)
T 2b3r_A 18 RNGTLFIMVMHIKDLVT----EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLS 93 (134)
T ss_dssp ETTEEEEEEEEEECCCC----TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEE
T ss_pred cCCEEEEEEEEeeCCCC----CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEE
Confidence 35899999999999995 34788999999999 4467899999999999999999999 753 45799999
Q ss_pred EEeCCCcCCCCCCCCCcccEEEEEEcccccCCCEEeeeEeee
Q 045058 665 VFDNSQLGEKSNGNKDLKIGKVRIRISTLETGRIYTHSYPLL 706 (1005)
Q Consensus 665 v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~ 706 (1005)
|||++.++ ++++||.+.|+|+++..+.....||+|.
T Consensus 94 V~d~d~~~------~~~~lG~~~i~l~~l~~~~~~~~W~~L~ 129 (134)
T 2b3r_A 94 VLSAESLR------ENFFLGGITLPLKDFNLSKETVKWYQLT 129 (134)
T ss_dssp EEECCSSS------CCEEEEEEEEEGGGSCTTSCEEEEEECB
T ss_pred EEECCCCC------CCcEEEEEEEEhhhccCCCCcceeEECC
Confidence 99999876 7899999999999999888889999996
No 33
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=3.6e-16 Score=150.10 Aligned_cols=107 Identities=23% Similarity=0.310 Sum_probs=93.3
Q ss_pred cceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEEC---CEEEEeeeccCCCCceeccEEEEEEeC----CCceEEEEEE
Q 045058 594 SIGILELGILNAVGLHPMKTRDGRGTSDTYCVAKYG---HKWVRTRTLVDNLSPKYNEQYTWEVFD----PATVLTVGVF 666 (1005)
Q Consensus 594 ~~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~g---~~~~~T~~~~~t~nP~wne~f~~~v~~----~~~~l~i~v~ 666 (1005)
..+.|+|+|++|+||++++ ..|.+||||++.+. ...+||+++++++||+|||.|.|.+.. ....|.|+||
T Consensus 24 ~~~~L~v~v~~a~~L~~~d---~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 100 (141)
T 2d8k_A 24 QESTLTVKIMKAQELPAKD---FSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVL 100 (141)
T ss_dssp SSCCEEEEEEEEESCCCCS---SSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEE
T ss_pred CCCEEEEEEEEeECCCCCC---CCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEE
Confidence 4589999999999999754 57889999999993 457899999999999999999998632 3578999999
Q ss_pred eCCCcCCCCCCCCCcccEEEEEEcccccCCCEEeeeEeeeecC
Q 045058 667 DNSQLGEKSNGNKDLKIGKVRIRISTLETGRIYTHSYPLLVLH 709 (1005)
Q Consensus 667 d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~ 709 (1005)
|++.++ +|++||.+.|+|.++..+.....||+|....
T Consensus 101 d~d~~~------~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 137 (141)
T 2d8k_A 101 DYDRFS------RNDPIGEVSIPLNKVDLTQMQTFWKDLKPSG 137 (141)
T ss_dssp ECCSSS------SCEEEEEEEEETTTSCTTSCEEEEECCEECC
T ss_pred ECCCCC------CCcEEEEEEEEhhhhcCCCCccEEEECcCCC
Confidence 999876 8999999999999999888788999997543
No 34
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.68 E-value=1.8e-16 Score=156.76 Aligned_cols=126 Identities=18% Similarity=0.159 Sum_probs=102.3
Q ss_pred eeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeeecCCCCCeeeeEEEEeecCCCCcEEEEEEEeCC-CCCCce
Q 045058 269 MYFLYVRVVKARELPAMDLTGSIDPFVEVKIGNYKGITKHYEKNQNPQWHQVFAFSRDRMQASVLEVVIKDKD-LVKDDF 347 (1005)
Q Consensus 269 ~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~~~~kT~~~~~~~nP~wne~f~f~~~~~~~~~l~v~V~d~~-~~~d~~ 347 (1005)
.+.|.|+|++|++|+..+..+.+||||+++++++.++|+++++++||+|||+|.|.+.. ...|.|+|||++ +++|++
T Consensus 35 ~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~~--~~~L~~~V~D~d~~~~dd~ 112 (173)
T 2nq3_A 35 KSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTP--VSKLHFRVWSHQTLKSDVL 112 (173)
T ss_dssp CEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEECT--TCEEEEEEEECCSSSCCEE
T ss_pred ceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeCC--CCEEEEEEEECCCCCCCce
Confidence 36899999999999944434559999999999989999999999999999999999864 578999999999 778999
Q ss_pred eEEEEEEceecCCCCCCCCCCCCeEEEeecCCCC-ccceEEEEEEEEecc
Q 045058 348 VGIVRFDINEVPLRVPPDSPLAPEWYRLEDKKGE-KIKGELMLAVWIGTQ 396 (1005)
Q Consensus 348 lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~-~~~G~i~l~~~~~~~ 396 (1005)
||++.++|.++.............|++|....+. ...|+|.+++.+.+.
T Consensus 113 lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 113 LGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQL 162 (173)
T ss_dssp EEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEEC
T ss_pred EEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeeec
Confidence 9999999999875422111223679999886432 267999999987653
No 35
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.68 E-value=7.7e-17 Score=156.11 Aligned_cols=111 Identities=23% Similarity=0.328 Sum_probs=92.5
Q ss_pred CcEEEEEEEEeecCCCCC-CCCCCCcEEEEEEC-----CeEeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEe
Q 045058 3 NLKLGVQVVGAHNLLPKD-GKGSSSAFVELYFD-----GQRFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYN 76 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d-~~g~~dpyv~v~~~-----~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d 76 (1005)
.+.|.|+|++|+||+.++ ..|.+||||+|++. ..+++|+++++++||+|||+|.|.+...+ +....|.|+|||
T Consensus 22 ~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~~~~~L~~~V~d 100 (148)
T 3fdw_A 22 TQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESL-LAQRTLQFSVWH 100 (148)
T ss_dssp TTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTT-GGGCEEEEEEEE
T ss_pred CCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhH-hCceEEEEEEEE
Confidence 478999999999999988 57899999999996 34899999999999999999999986543 445689999999
Q ss_pred CCCCCCCCcccEEEEEeCCcccCCCCceeeeEecccCCCc
Q 045058 77 NIGDTNSRSFLGKVCLTGNSFVPLSDSVVLHYPLEKRGIF 116 (1005)
Q Consensus 77 ~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~ 116 (1005)
++. .++|++||++.|+|.++...... ..||+|.+++..
T Consensus 101 ~d~-~~~~~~iG~~~i~l~~l~~~~~~-~~W~~L~~~~~~ 138 (148)
T 3fdw_A 101 HGR-FGRNTFLGEAEIQMDSWKLDKKL-DHCLPLHGKISA 138 (148)
T ss_dssp ECG-GGCEEEEEEEEEEHHHHHHHCCS-EEEEECBCC---
T ss_pred CCC-CcCCcEEEEEEEEcccccccCCc-cceEECcCcccc
Confidence 954 45899999999999998665433 579999987643
No 36
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.68 E-value=1.3e-16 Score=153.69 Aligned_cols=107 Identities=24% Similarity=0.328 Sum_probs=91.9
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeEeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEeCCC
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYF---DGQRFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYNNIG 79 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~---~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~~~ 79 (1005)
.+.|+|+|++|++|+.++..|.+||||+|++ +.++++|+++++++||+|||+|.|.+...+ +....|.|+|||++.
T Consensus 33 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-l~~~~L~i~V~d~d~ 111 (143)
T 3f04_A 33 NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSE-LGGKTLVMAVYDFDR 111 (143)
T ss_dssp TTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHH-HTTCEEEEEEEECCS
T ss_pred CCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhh-cCCCEEEEEEEeCCC
Confidence 5789999999999999998899999999999 456899999999999999999999985432 344689999999964
Q ss_pred CCCCCcccEEEEEeCCcccCCCCceeeeEeccc
Q 045058 80 DTNSRSFLGKVCLTGNSFVPLSDSVVLHYPLEK 112 (1005)
Q Consensus 80 ~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~ 112 (1005)
.++|++||++.++|.++..... ...||+|++
T Consensus 112 -~~~~~~iG~~~i~l~~l~~~~~-~~~W~~L~~ 142 (143)
T 3f04_A 112 -FSKHDIIGEFKVPMNTVDFGHV-TEEWRDLQS 142 (143)
T ss_dssp -SSCCEEEEEEEEEGGGCCTTSC-EEEEEECBC
T ss_pred -CCCCceEEEEEEEHHHccCCCC-cceEEECcC
Confidence 4589999999999999876543 468999975
No 37
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.68 E-value=1.9e-16 Score=153.98 Aligned_cols=108 Identities=24% Similarity=0.329 Sum_probs=92.0
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeEeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEeCCC
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYF---DGQRFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYNNIG 79 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~---~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~~~ 79 (1005)
.+.|+|+|++|+||+.+|..|.+||||+|++ ++++++|+++++++||+|||+|.|.+...+ +....|.|+|||++.
T Consensus 41 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-l~~~~L~i~V~d~d~ 119 (152)
T 1rsy_A 41 NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSE-LGGKTLVMAVYDFDR 119 (152)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHH-HTTCEEEEEEEECCS
T ss_pred CCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHH-cCCCEEEEEEEECCC
Confidence 5789999999999999999999999999999 346899999999999999999999985432 334689999999964
Q ss_pred CCCCCcccEEEEEeCCcccCCCCceeeeEecccC
Q 045058 80 DTNSRSFLGKVCLTGNSFVPLSDSVVLHYPLEKR 113 (1005)
Q Consensus 80 ~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~ 113 (1005)
.++|++||++.|++.++.... ....||+|.+.
T Consensus 120 -~~~~~~iG~~~i~l~~l~~~~-~~~~W~~L~~~ 151 (152)
T 1rsy_A 120 -FSKHDIIGEFKVPMNTVDFGH-VTEEWRDLQSA 151 (152)
T ss_dssp -SSCCEEEEEEEEEGGGCCCSS-CEEEEEECBCC
T ss_pred -CCCCcEEEEEEEEchhccCCC-CcceEEECCCC
Confidence 458999999999999986644 44689999753
No 38
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.68 E-value=7.6e-17 Score=156.16 Aligned_cols=110 Identities=16% Similarity=0.282 Sum_probs=93.3
Q ss_pred CcceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEEC-----CEEEEeeeccCCCCceeccEEEEEEeCC---CceEEEE
Q 045058 593 PSIGILELGILNAVGLHPMKTRDGRGTSDTYCVAKYG-----HKWVRTRTLVDNLSPKYNEQYTWEVFDP---ATVLTVG 664 (1005)
Q Consensus 593 ~~~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~g-----~~~~~T~~~~~t~nP~wne~f~~~v~~~---~~~l~i~ 664 (1005)
+..|.|.|+|++|+||++++ +..+.+||||++.++ ...++|+++++|+||+|||+|.|.+... ...|.|+
T Consensus 20 ~~~~~L~V~v~~a~~L~~~d--~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~ 97 (148)
T 3fdw_A 20 QQTQSLVVHVKECHQLAYAD--EAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFS 97 (148)
T ss_dssp TTTTEEEEEEEEEESCCCSB--TTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEE
T ss_pred CCCCEEEEEEEEecCCCCcc--cCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEE
Confidence 34589999999999999764 246789999999995 3478999999999999999999998753 4579999
Q ss_pred EEeCCCcCCCCCCCCCcccEEEEEEcccccCCCEEeeeEeeeecCC
Q 045058 665 VFDNSQLGEKSNGNKDLKIGKVRIRISTLETGRIYTHSYPLLVLHP 710 (1005)
Q Consensus 665 v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~ 710 (1005)
|||++.++ +|++||.+.|+|+++..+.....||+|.....
T Consensus 98 V~d~d~~~------~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~~ 137 (148)
T 3fdw_A 98 VWHHGRFG------RNTFLGEAEIQMDSWKLDKKLDHCLPLHGKIS 137 (148)
T ss_dssp EEEECGGG------CEEEEEEEEEEHHHHHHHCCSEEEEECBCC--
T ss_pred EEECCCCc------CCcEEEEEEEEcccccccCCccceEECcCccc
Confidence 99999876 89999999999999987776789999975443
No 39
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.67 E-value=1.7e-16 Score=152.68 Aligned_cols=110 Identities=28% Similarity=0.351 Sum_probs=91.2
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eEeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEeC
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYFDG-----QRFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYNN 77 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~~-----~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~ 77 (1005)
.+.|.|+|++|+||+.++..| +||||+|++.. .+++|+++++|+||+|||+|.|.+...+ +....|.|+|||+
T Consensus 23 ~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-l~~~~L~i~V~d~ 100 (142)
T 2dmg_A 23 RNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPE-VQRRTLDVAVKNS 100 (142)
T ss_dssp TTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHH-HHHCEEEEEEEEC
T ss_pred CCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHH-hCcCEEEEEEEEC
Confidence 478999999999999999999 99999999932 5789999999999999999999985422 3346899999999
Q ss_pred CCCCC-CCcccEEEEEeCCcccCCCCceeeeEecccCCC
Q 045058 78 IGDTN-SRSFLGKVCLTGNSFVPLSDSVVLHYPLEKRGI 115 (1005)
Q Consensus 78 ~~~~~-~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~ 115 (1005)
+.... .|++||++.|+|.++.... ....||+|.+.+.
T Consensus 101 d~~~~~~~~~iG~~~i~l~~~~~~~-~~~~W~~L~~~~~ 138 (142)
T 2dmg_A 101 GGFLSKDKGLLGKVLVALASEELAK-GWTQWYDLTEDSG 138 (142)
T ss_dssp CCSSCCSCCCCEEEEEECCCSTTTT-CBCCBCCCBCSCS
T ss_pred CCccccCCcEEEEEEEecccccccc-cccceeeccCCCC
Confidence 65443 3579999999999986654 3457999987753
No 40
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.67 E-value=1.7e-16 Score=154.35 Aligned_cols=105 Identities=27% Similarity=0.371 Sum_probs=93.2
Q ss_pred CcceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEE---CCEEEEeeeccCCCCceeccEEEEEEeC---CCceEEEEEE
Q 045058 593 PSIGILELGILNAVGLHPMKTRDGRGTSDTYCVAKY---GHKWVRTRTLVDNLSPKYNEQYTWEVFD---PATVLTVGVF 666 (1005)
Q Consensus 593 ~~~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~---g~~~~~T~~~~~t~nP~wne~f~~~v~~---~~~~l~i~v~ 666 (1005)
+..+.|+|+|++|+||++++ ..+.+||||++.+ +.+.+||+++++++||+|||.|.|.+.. ....|.|+||
T Consensus 39 ~~~~~L~V~v~~a~~L~~~d---~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~ 115 (152)
T 1rsy_A 39 FQNNQLLVGIIQAAELPALD---MGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVY 115 (152)
T ss_dssp TTTTEEEEEEEEEESCCCCS---TTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEE
T ss_pred CCCCEEEEEEEEeECCCCcc---CCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEE
Confidence 34589999999999999754 4788999999999 4457899999999999999999999864 3679999999
Q ss_pred eCCCcCCCCCCCCCcccEEEEEEcccccCCCEEeeeEeee
Q 045058 667 DNSQLGEKSNGNKDLKIGKVRIRISTLETGRIYTHSYPLL 706 (1005)
Q Consensus 667 d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~ 706 (1005)
|++.++ +|++||.+.|+|+++..+....+||+|.
T Consensus 116 d~d~~~------~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 149 (152)
T 1rsy_A 116 DFDRFS------KHDIIGEFKVPMNTVDFGHVTEEWRDLQ 149 (152)
T ss_dssp ECCSSS------CCEEEEEEEEEGGGCCCSSCEEEEEECB
T ss_pred ECCCCC------CCcEEEEEEEEchhccCCCCcceEEECC
Confidence 999776 8999999999999999888889999996
No 41
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.67 E-value=5.4e-17 Score=156.13 Aligned_cols=109 Identities=31% Similarity=0.491 Sum_probs=91.5
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEECCe--------------EeeccccCCCCCCceeeEEEEE-eccCccccc
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYFDGQ--------------RFRTTIKENDLNPVWNESFYFN-ISDASKLHY 67 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~--------------~~~T~v~~~t~nP~Wne~f~f~-v~~~~~~~~ 67 (1005)
.+.|.|+|++|+||+.+|..|.+||||+|++.+. +++|+++++|+||+|||+|.|. +.. +.+..
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~-~~l~~ 95 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISM-EQLMK 95 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCH-HHHTT
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCH-HHccC
Confidence 3689999999999999999999999999999763 5899999999999999999998 532 22345
Q ss_pred eEEEEEEEeCCCCCCCCcccEEEEEeCCcccCCCCceeeeEecccCC
Q 045058 68 LTLEAYIYNNIGDTNSRSFLGKVCLTGNSFVPLSDSVVLHYPLEKRG 114 (1005)
Q Consensus 68 ~~l~v~V~d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~ 114 (1005)
..|.|+|||++. .++|++||++.|+|.++..... ...||+|.+++
T Consensus 96 ~~l~i~V~d~d~-~~~~~~lG~~~i~l~~l~~~~~-~~~W~~L~~~~ 140 (142)
T 1rh8_A 96 KTLEVTVWDYDR-FSSNDFLGEVLIDLSSTSHLDN-TPRWYPLKEQT 140 (142)
T ss_dssp CEEEEEEEEECS-SSCEEEEEEEEEETTSCGGGTT-CCEEEECBCCC
T ss_pred CEEEEEEEECCC-CCCCceEEEEEEeccccccCCC-CCeEEECCccC
Confidence 689999999964 5689999999999999865443 35899998765
No 42
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.66 E-value=2.9e-16 Score=152.80 Aligned_cols=110 Identities=15% Similarity=0.297 Sum_probs=90.2
Q ss_pred CCcEEEEEEEEeecCCCCCCCCCCCcEEEEEEC-----CeEeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEe
Q 045058 2 RNLKLGVQVVGAHNLLPKDGKGSSSAFVELYFD-----GQRFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYN 76 (1005)
Q Consensus 2 ~~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~-----~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d 76 (1005)
..+.|.|+|++|+||+.++ .|.+||||+|++. ..+++|+++++|+||+|||+|.|.+...+ .. ..|.|+|||
T Consensus 25 ~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~~-~~L~i~V~d 101 (153)
T 3fbk_A 25 QDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEED-DQ-KRLLVTVWN 101 (153)
T ss_dssp SSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGG-TT-SEEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHH-hC-CEEEEEEEe
Confidence 3578999999999999998 6899999999982 35799999999999999999999985432 22 359999999
Q ss_pred CCCCCCCCcccEEEEEeCCcccCCCCceeeeEecccCC
Q 045058 77 NIGDTNSRSFLGKVCLTGNSFVPLSDSVVLHYPLEKRG 114 (1005)
Q Consensus 77 ~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~ 114 (1005)
++.....|++||++.++|.++...+.....||+|.++.
T Consensus 102 ~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~ 139 (153)
T 3fbk_A 102 RASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEH 139 (153)
T ss_dssp CCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTT
T ss_pred CCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChh
Confidence 96543239999999999999975445556899998764
No 43
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.66 E-value=4.1e-16 Score=151.15 Aligned_cols=106 Identities=27% Similarity=0.370 Sum_probs=91.5
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEEC-----CeEeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEeC
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYFD-----GQRFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYNN 77 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~-----~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~ 77 (1005)
.+.|.|+|++|+||+.++..|.+||||+|++. ..+++|+++++++||+|||+|.|.+...+. ...|.|+|||+
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~--~~~L~i~V~d~ 107 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDK--DRRLSVEIWDW 107 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGG--GCEEEEEEEEC
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccC--CCEEEEEEEEC
Confidence 46899999999999999999999999999996 358999999999999999999999865431 35799999999
Q ss_pred CCCCCCCcccEEEEEeCCcccCCCCceeeeEecccC
Q 045058 78 IGDTNSRSFLGKVCLTGNSFVPLSDSVVLHYPLEKR 113 (1005)
Q Consensus 78 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~ 113 (1005)
+. .++|++||++.|+|.++.... ...||+|.+.
T Consensus 108 d~-~~~~~~iG~~~i~l~~l~~~~--~~~W~~L~~~ 140 (149)
T 1a25_A 108 DL-TSRNDFMGSLSFGISELQKAG--VDGWFKLLSQ 140 (149)
T ss_dssp CS-SSCCEEEEEEEEEHHHHTTCC--EEEEEECBCH
T ss_pred CC-CCCCCEEEEEEEEHHHhCcCc--cCCeEEccCC
Confidence 54 458999999999999987653 4689999865
No 44
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.66 E-value=4e-16 Score=149.04 Aligned_cols=106 Identities=29% Similarity=0.466 Sum_probs=92.0
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEeC
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYF-----DGQRFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYNN 77 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~-----~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~ 77 (1005)
.+.|.|+|++|++|+.++..|.+||||+|++ +..+++|+++++++||+|||+|.|.+...+. ...|.|+|||+
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~--~~~l~i~v~d~ 92 (137)
T 3rdl_A 15 DEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDK--DRRLSVEIWDW 92 (137)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGG--GCEEEEEEEEC
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhc--CCEEEEEEEEC
Confidence 4789999999999999999999999999999 4568999999999999999999999865432 34799999999
Q ss_pred CCCCCCCcccEEEEEeCCcccCCCCceeeeEecccC
Q 045058 78 IGDTNSRSFLGKVCLTGNSFVPLSDSVVLHYPLEKR 113 (1005)
Q Consensus 78 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~ 113 (1005)
+. .++|++||++.++|.++...+ ...||+|.+.
T Consensus 93 d~-~~~~~~iG~~~i~l~~l~~~~--~~~W~~L~~~ 125 (137)
T 3rdl_A 93 DR-TTRNDFMGSLSFGVSELMKMP--ASGWYKLLNQ 125 (137)
T ss_dssp CS-SSCCEEEEEEEEEHHHHHHSC--EEEEEECBCH
T ss_pred CC-CCCCceEEEEEEeHHHhccCc--cCceEECcCc
Confidence 54 558999999999999997655 4689999865
No 45
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.66 E-value=4.4e-16 Score=151.59 Aligned_cols=106 Identities=25% Similarity=0.326 Sum_probs=90.7
Q ss_pred CcceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEE-----CCEEEEeeeccCCCCceeccEEEEEEe--CCCceEEEEE
Q 045058 593 PSIGILELGILNAVGLHPMKTRDGRGTSDTYCVAKY-----GHKWVRTRTLVDNLSPKYNEQYTWEVF--DPATVLTVGV 665 (1005)
Q Consensus 593 ~~~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~-----g~~~~~T~~~~~t~nP~wne~f~~~v~--~~~~~l~i~v 665 (1005)
+..|.|.|+|++|+||++++ .|.+||||++.+ +...++|+++++|+||+|||+|.|.+. +....|.|+|
T Consensus 24 ~~~~~L~V~v~~a~~L~~~d----~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V 99 (153)
T 3fbk_A 24 AQDRVLLLHIIEGKGLISKQ----PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTV 99 (153)
T ss_dssp ESSSEEEEEEEEEESCCCCS----SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEE
T ss_pred CCCCEEEEEEEEeeCCCCCC----CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEE
Confidence 34699999999999999764 478999999999 235689999999999999999999994 4556799999
Q ss_pred EeCCCcCCCCCCCC-CcccEEEEEEcccccC-CCEEeeeEeeeec
Q 045058 666 FDNSQLGEKSNGNK-DLKIGKVRIRISTLET-GRIYTHSYPLLVL 708 (1005)
Q Consensus 666 ~d~~~~~~~~~~~~-d~~lG~~~i~l~~l~~-~~~~~~~~~L~~~ 708 (1005)
||++.++ + |++||.+.|+|+++.. +.....||+|...
T Consensus 100 ~d~d~~~------~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~ 138 (153)
T 3fbk_A 100 WNRASQS------RQSGLIGCMSFGVKSLLTPDKEISGWYYLLGE 138 (153)
T ss_dssp EECCSSG------GGCEEEEEEEEEHHHHTC--CCEEEEEECBCT
T ss_pred EeCCCCC------CCCcEEEEEEEEHHHhcCCCCccccEEECCCh
Confidence 9998765 5 8999999999999985 6778899999743
No 46
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.65 E-value=8.1e-16 Score=146.73 Aligned_cols=106 Identities=18% Similarity=0.215 Sum_probs=88.7
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---C-eEeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEeCC
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYFD---G-QRFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYNNI 78 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~---~-~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~~ 78 (1005)
.+.|+|+|++|+ ++|..|.+||||+|++. + .+++|+++++|+||+|||+|.|.+...+ +....|.|.|||++
T Consensus 25 ~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~-l~~~~L~~~V~d~d 100 (138)
T 1wfm_A 25 KAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEE-LPTATLTLTLRTCD 100 (138)
T ss_dssp TTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTS-STTCEEEEEEEECC
T ss_pred CCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHH-cCCCEEEEEEEECC
Confidence 578999999999 46788999999999993 3 3689999999999999999999986543 45578999999996
Q ss_pred CCCCCCcccEEEEEeCCcccCCCCceeeeEecccCC
Q 045058 79 GDTNSRSFLGKVCLTGNSFVPLSDSVVLHYPLEKRG 114 (1005)
Q Consensus 79 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~ 114 (1005)
. .++|++||++.++|.++.... ....|++|.+..
T Consensus 101 ~-~~~dd~lG~~~i~l~~l~~~~-~~~~W~~L~~~~ 134 (138)
T 1wfm_A 101 R-FSRHSVAGELRLGLDGTSVPL-GAAQWGELKTSG 134 (138)
T ss_dssp S-SCTTSCSEEEEEESSSSSSCT-TCCEEEECCCCS
T ss_pred C-CCCCcEEEEEEEEcccccCcc-cccceeeCcCCC
Confidence 4 568999999999999986543 345799998754
No 47
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.65 E-value=3.8e-16 Score=150.11 Aligned_cols=108 Identities=23% Similarity=0.397 Sum_probs=91.0
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eEeeccccCCCCCCceeeEEEEE-eccCccccceEEEEEEEe
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYFDG-----QRFRTTIKENDLNPVWNESFYFN-ISDASKLHYLTLEAYIYN 76 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~~-----~~~~T~v~~~t~nP~Wne~f~f~-v~~~~~~~~~~l~v~V~d 76 (1005)
.+.|.|+|++|+||+.++..|.+||||+|++.+ .+++|+++++++||+|||+|.|. +.. +.+....|.|+|||
T Consensus 28 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~-~~~~~~~l~i~V~d 106 (142)
T 2chd_A 28 NSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITE-EDMQRKTLRISVCD 106 (142)
T ss_dssp GTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCH-HHHHHCEEEEEEEE
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCH-HHccCCEEEEEEEE
Confidence 478999999999999999999999999999965 68999999999999999999999 532 22334689999999
Q ss_pred CCCCCCCCcccEEEEEeCCcccCCCCceeeeEecccC
Q 045058 77 NIGDTNSRSFLGKVCLTGNSFVPLSDSVVLHYPLEKR 113 (1005)
Q Consensus 77 ~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~ 113 (1005)
++. .++|++||++.|++.++..... ...|++|+++
T Consensus 107 ~d~-~~~d~~iG~~~i~l~~l~~~~~-~~~~~~L~~p 141 (142)
T 2chd_A 107 EDK-FGHNEFIGETRFSLKKLKANQR-KNFNICLERV 141 (142)
T ss_dssp ECT-TSCEEEEEEEEEEGGGCCTTCC-EEEEEECBCC
T ss_pred CCC-CCCCcEEEEEEEEHHHcCCCCc-cEEEEecccC
Confidence 954 4589999999999999876554 3567998753
No 48
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.65 E-value=1.9e-16 Score=153.65 Aligned_cols=113 Identities=18% Similarity=0.222 Sum_probs=95.2
Q ss_pred cceeeeccccceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC---e---eeeeeeecCCCCCeeeeEEEEeecC--CC
Q 045058 258 KTASTYDLVERMYFLYVRVVKARELPAMDLTGSIDPFVEVKIGN---Y---KGITKHYEKNQNPQWHQVFAFSRDR--MQ 329 (1005)
Q Consensus 258 ~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~---~---~~kT~~~~~~~nP~wne~f~f~~~~--~~ 329 (1005)
.++..|+ ...+.|.|+|++|+||+.++.+|.+||||++++.+ . ++||+++++++||+|||+|.|.+.. +.
T Consensus 33 ~~sl~y~--~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~ 110 (155)
T 2z0u_A 33 QIALKYD--EKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALH 110 (155)
T ss_dssp EEEEEEE--TTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHH
T ss_pred EEEEEEc--CCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhC
Confidence 3445554 45589999999999999999999999999999976 2 6899999999999999999999753 33
Q ss_pred CcEEEEEEEeCC-CCCCceeEEEEEEceecCCCCCCCCCCCCeEEEee
Q 045058 330 ASVLEVVIKDKD-LVKDDFVGIVRFDINEVPLRVPPDSPLAPEWYRLE 376 (1005)
Q Consensus 330 ~~~l~v~V~d~~-~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~ 376 (1005)
...|.|+|||++ ++++++||++.++|.++... .....+||+|.
T Consensus 111 ~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~----~~~~~~W~~L~ 154 (155)
T 2z0u_A 111 QKTLRVDVCTTDRSHLEECLGGAQISLAEVCRS----GERSTRWYNLL 154 (155)
T ss_dssp HCEEEEEEEEECTTSCEEEEEEEEEECTTSCTT----CCCEEEEEEEB
T ss_pred cCEEEEEEEECCCCCCCcEEEEEEEEHHHccCC----CCccccceEcc
Confidence 568999999999 78899999999999998532 23567899985
No 49
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.65 E-value=1e-15 Score=151.32 Aligned_cols=93 Identities=26% Similarity=0.431 Sum_probs=82.3
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eEeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEeC
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYFDG-----QRFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYNN 77 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~~-----~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~ 77 (1005)
.+.|.|+|++|+||+.+|..|.+||||+|++.+ .+++|+++++++||+|||+|.|.+...+ +....|.|+|||+
T Consensus 36 ~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-l~~~~L~i~V~d~ 114 (166)
T 2cm5_A 36 QGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSD-LAKKSLDISVWDY 114 (166)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGG-GGGCEEEEEEEEC
T ss_pred CCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHh-cCCCEEEEEEEEC
Confidence 578999999999999999999999999999975 5899999999999999999999986432 4457899999999
Q ss_pred CCCCCCCcccEEEEEeCCcc
Q 045058 78 IGDTNSRSFLGKVCLTGNSF 97 (1005)
Q Consensus 78 ~~~~~~d~~lG~~~i~l~~l 97 (1005)
+. .++|++||++.|++.++
T Consensus 115 d~-~~~~~~iG~~~i~l~~~ 133 (166)
T 2cm5_A 115 DI-GKSNDYIGGCQLGISAK 133 (166)
T ss_dssp CS-SSCCEEEEEEEEETTCC
T ss_pred CC-CCCCcEEEeEEEecccC
Confidence 54 45899999999999885
No 50
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.65 E-value=1e-15 Score=146.03 Aligned_cols=102 Identities=15% Similarity=0.115 Sum_probs=87.8
Q ss_pred cceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEEC---C-EEEEeeeccCCCCceeccEEEEEEeCC---CceEEEEEE
Q 045058 594 SIGILELGILNAVGLHPMKTRDGRGTSDTYCVAKYG---H-KWVRTRTLVDNLSPKYNEQYTWEVFDP---ATVLTVGVF 666 (1005)
Q Consensus 594 ~~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~g---~-~~~~T~~~~~t~nP~wne~f~~~v~~~---~~~l~i~v~ 666 (1005)
..+.|+|+|++|++ .|..|.+||||++.+. + ..++|+++++|+||+|||.|.|.+... ...|.|+||
T Consensus 24 ~~~~L~V~v~~a~~------~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~ 97 (138)
T 1wfm_A 24 QKAELFVTRLEAVT------SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLR 97 (138)
T ss_dssp TTTEEEEEEEEEEC------CCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEE
T ss_pred CCCEEEEEEEEEEc------CCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEE
Confidence 45899999999993 2457899999999993 2 357999999999999999999998643 568999999
Q ss_pred eCCCcCCCCCCCCCcccEEEEEEcccccCCCEEeeeEeeee
Q 045058 667 DNSQLGEKSNGNKDLKIGKVRIRISTLETGRIYTHSYPLLV 707 (1005)
Q Consensus 667 d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 707 (1005)
|+|.++ +|++||.+.|+|.++..+.....||+|..
T Consensus 98 d~d~~~------~dd~lG~~~i~l~~l~~~~~~~~W~~L~~ 132 (138)
T 1wfm_A 98 TCDRFS------RHSVAGELRLGLDGTSVPLGAAQWGELKT 132 (138)
T ss_dssp ECCSSC------TTSCSEEEEEESSSSSSCTTCCEEEECCC
T ss_pred ECCCCC------CCcEEEEEEEEcccccCcccccceeeCcC
Confidence 999876 89999999999999986666789999974
No 51
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.65 E-value=7.3e-16 Score=145.52 Aligned_cols=111 Identities=24% Similarity=0.489 Sum_probs=90.6
Q ss_pred cceeeeccccceeEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeeeeeecCCCCCeeeeEEEEeec---CCC
Q 045058 258 KTASTYDLVERMYFLYVRVVKARELPAMDLTGSIDPFVEVKI-----GNYKGITKHYEKNQNPQWHQVFAFSRD---RMQ 329 (1005)
Q Consensus 258 ~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~-----~~~~~kT~~~~~~~nP~wne~f~f~~~---~~~ 329 (1005)
.++..|+. ..+.|.|+|++|++|+..+.+|.+||||++++ +...++|++++++.||.|||+|.|.+. ++.
T Consensus 8 ~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~ 85 (129)
T 2bwq_A 8 SIKLWFDK--VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFR 85 (129)
T ss_dssp EEEEEEET--TTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGG
T ss_pred EEEEEEcc--CCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhc
Confidence 34555543 45899999999999999999999999999999 346789999999999999999999852 334
Q ss_pred CcEEEEEEEeCC-CCC--CceeEEEEEEceecCCCCCCCCCCCCeEEEee
Q 045058 330 ASVLEVVIKDKD-LVK--DDFVGIVRFDINEVPLRVPPDSPLAPEWYRLE 376 (1005)
Q Consensus 330 ~~~l~v~V~d~~-~~~--d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~ 376 (1005)
...|.|+|||++ .++ +++||++.++|.++... ...+||+|.
T Consensus 86 ~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~------~~~~W~~Lq 129 (129)
T 2bwq_A 86 ERMLEITLWDQARVREEESEFLGEILIELETALLD------DEPHWYKLQ 129 (129)
T ss_dssp GCEEEEEEEEC-------CEEEEEEEEEGGGCCCS------SCEEEEECC
T ss_pred CCeEEEEEEECCcCcCcCCceeEEEEEEccccCCC------cCCccEECc
Confidence 579999999999 565 99999999999998753 268899984
No 52
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.64 E-value=6.3e-16 Score=147.68 Aligned_cols=103 Identities=25% Similarity=0.372 Sum_probs=91.0
Q ss_pred eEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEE-----CCEEEEeeeccCCCCceeccEEEEEEeCC--CceEEEEEEeC
Q 045058 596 GILELGILNAVGLHPMKTRDGRGTSDTYCVAKY-----GHKWVRTRTLVDNLSPKYNEQYTWEVFDP--ATVLTVGVFDN 668 (1005)
Q Consensus 596 g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~-----g~~~~~T~~~~~t~nP~wne~f~~~v~~~--~~~l~i~v~d~ 668 (1005)
|.|.|+|++|+||++++ ..|.+||||++.+ +...++|+++++++||+|||.|.|.+... ...|.|+|||+
T Consensus 16 ~~L~v~v~~a~~L~~~d---~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~ 92 (137)
T 3rdl_A 16 EKLHVTVRDAKNLIPMD---PNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDW 92 (137)
T ss_dssp TEEEEEEEEEESCCCCS---TTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCCC---CCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEEC
Confidence 89999999999999754 4788999999999 56679999999999999999999998753 45899999999
Q ss_pred CCcCCCCCCCCCcccEEEEEEcccccCCCEEeeeEeeeec
Q 045058 669 SQLGEKSNGNKDLKIGKVRIRISTLETGRIYTHSYPLLVL 708 (1005)
Q Consensus 669 ~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 708 (1005)
+.++ +|++||.+.|+|+++..+. ..+||+|...
T Consensus 93 d~~~------~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~ 125 (137)
T 3rdl_A 93 DRTT------RNDFMGSLSFGVSELMKMP-ASGWYKLLNQ 125 (137)
T ss_dssp CSSS------CCEEEEEEEEEHHHHHHSC-EEEEEECBCH
T ss_pred CCCC------CCceEEEEEEeHHHhccCc-cCceEECcCc
Confidence 9776 8999999999999998766 6899999743
No 53
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.64 E-value=7.4e-16 Score=149.05 Aligned_cols=109 Identities=18% Similarity=0.191 Sum_probs=91.1
Q ss_pred CcceEEEEEEEEecCCCCC-CCC---CCCCCCCcEEEEEEC---CEEEEeeeccCCCCceeccEEEEEEeCC---CceEE
Q 045058 593 PSIGILELGILNAVGLHPM-KTR---DGRGTSDTYCVAKYG---HKWVRTRTLVDNLSPKYNEQYTWEVFDP---ATVLT 662 (1005)
Q Consensus 593 ~~~g~l~v~i~~a~~L~~~-~~~---~~~~~~dpyv~~~~g---~~~~~T~~~~~t~nP~wne~f~~~v~~~---~~~l~ 662 (1005)
+..|.|.|+|++|+||++. +.. +..+.+||||++.++ ...+||+++++++||+|||+|.|.+... ...|.
T Consensus 23 ~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~ 102 (147)
T 2enp_A 23 LLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLL 102 (147)
T ss_dssp TTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEE
T ss_pred CCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEE
Confidence 3458999999999999973 321 124689999999995 3568999999999999999999998642 46899
Q ss_pred EEEEeCCCcCCCCCCCCCcccEEEEEEcccccCCCEEeeeEeeee
Q 045058 663 VGVFDNSQLGEKSNGNKDLKIGKVRIRISTLETGRIYTHSYPLLV 707 (1005)
Q Consensus 663 i~v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 707 (1005)
|+|||++.++ ++++||.+.|+|.++..+.....||+|..
T Consensus 103 ~~V~d~d~~~------~~~~iG~~~i~l~~l~~~~~~~~w~~L~~ 141 (147)
T 2enp_A 103 LTVVDFDKFS------RHCVIGKVSVPLCEVDLVKGGHWWKALIP 141 (147)
T ss_dssp EEEECCSTTC------CSCCCEEEEEETTTSCTTTCCCEEECCBC
T ss_pred EEEEECCCCc------CCcEEEEEEEechhcCCCCCccEEEEeec
Confidence 9999999776 78999999999999987766678999973
No 54
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.64 E-value=5.9e-16 Score=149.74 Aligned_cols=109 Identities=20% Similarity=0.232 Sum_probs=89.8
Q ss_pred CcEEEEEEEEeecCCCC-CC------CCCCCcEEEEEEC---CeEeeccccCCCCCCceeeEEEEEeccCccccceEEEE
Q 045058 3 NLKLGVQVVGAHNLLPK-DG------KGSSSAFVELYFD---GQRFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEA 72 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~-d~------~g~~dpyv~v~~~---~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v 72 (1005)
.+.|.|+|++|+||+.+ +. .|.+||||+|++. +++++|+++++++||+|||+|.|.+...+ +....|.|
T Consensus 25 ~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-l~~~~L~~ 103 (147)
T 2enp_A 25 HNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLE-AQRRTLLL 103 (147)
T ss_dssp TTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHH-HHHSEEEE
T ss_pred CCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHH-hccCEEEE
Confidence 47899999999999984 43 3589999999996 35789999999999999999999985432 33458999
Q ss_pred EEEeCCCCCCCCcccEEEEEeCCcccCCCCceeeeEecccCC
Q 045058 73 YIYNNIGDTNSRSFLGKVCLTGNSFVPLSDSVVLHYPLEKRG 114 (1005)
Q Consensus 73 ~V~d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~ 114 (1005)
+|||++. .++|++||++.|+|.++...... ..|++|.+++
T Consensus 104 ~V~d~d~-~~~~~~iG~~~i~l~~l~~~~~~-~~w~~L~~~~ 143 (147)
T 2enp_A 104 TVVDFDK-FSRHCVIGKVSVPLCEVDLVKGG-HWWKALIPSG 143 (147)
T ss_dssp EEECCST-TCCSCCCEEEEEETTTSCTTTCC-CEEECCBCCC
T ss_pred EEEECCC-CcCCcEEEEEEEechhcCCCCCc-cEEEEeecCC
Confidence 9999964 45899999999999998665443 4799999765
No 55
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.64 E-value=1.6e-15 Score=148.67 Aligned_cols=110 Identities=26% Similarity=0.325 Sum_probs=91.2
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eEeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEeC
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYFDG-----QRFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYNN 77 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~~-----~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~ 77 (1005)
.+.|.|+|++|+||+.+|..|.+||||+|++.. .+++|+++++++||+|||+|.|.+...+ +....|.|+|||+
T Consensus 24 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-l~~~~l~i~V~d~ 102 (159)
T 1tjx_A 24 AGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQ-IQKVQVVVTVLDY 102 (159)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGG-GGGCEEEEEEEEC
T ss_pred CCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHH-hCCcEEEEEEEEC
Confidence 578999999999999999999999999999852 4789999999999999999999986533 4456899999999
Q ss_pred CCCCCCCcccEEEEEeCCcc----------c-CCCCceeeeEecccCC
Q 045058 78 IGDTNSRSFLGKVCLTGNSF----------V-PLSDSVVLHYPLEKRG 114 (1005)
Q Consensus 78 ~~~~~~d~~lG~~~i~l~~l----------~-~~~~~~~~w~~L~~~~ 114 (1005)
+. .++|++||++.|++..+ . ..+.....||+|.+..
T Consensus 103 d~-~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~~~ 149 (159)
T 1tjx_A 103 DK-IGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVEE 149 (159)
T ss_dssp CS-SSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBCHH
T ss_pred CC-CCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcCcc
Confidence 64 56899999999999853 2 2234456899998653
No 56
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.64 E-value=6.7e-16 Score=149.66 Aligned_cols=102 Identities=25% Similarity=0.373 Sum_probs=90.2
Q ss_pred eEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEEC-----CEEEEeeeccCCCCceeccEEEEEEeCC--CceEEEEEEeC
Q 045058 596 GILELGILNAVGLHPMKTRDGRGTSDTYCVAKYG-----HKWVRTRTLVDNLSPKYNEQYTWEVFDP--ATVLTVGVFDN 668 (1005)
Q Consensus 596 g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~g-----~~~~~T~~~~~t~nP~wne~f~~~v~~~--~~~l~i~v~d~ 668 (1005)
|.|.|+|++|+||++++ ..+.+||||+++++ ...+||+++++++||+|||+|.|.+... ...|.|+|||+
T Consensus 31 ~~L~v~v~~a~~L~~~d---~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~ 107 (149)
T 1a25_A 31 EVLIVVVRDAKNLVPMD---PNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDW 107 (149)
T ss_dssp SEEEEEEEEEESCCCCS---TTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCCC---CCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEEC
Confidence 78999999999999764 47889999999996 3578999999999999999999999753 46899999999
Q ss_pred CCcCCCCCCCCCcccEEEEEEcccccCCCEEeeeEeeee
Q 045058 669 SQLGEKSNGNKDLKIGKVRIRISTLETGRIYTHSYPLLV 707 (1005)
Q Consensus 669 ~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 707 (1005)
+.++ +|++||.+.|+|.++..+. ...||+|..
T Consensus 108 d~~~------~~~~iG~~~i~l~~l~~~~-~~~W~~L~~ 139 (149)
T 1a25_A 108 DLTS------RNDFMGSLSFGISELQKAG-VDGWFKLLS 139 (149)
T ss_dssp CSSS------CCEEEEEEEEEHHHHTTCC-EEEEEECBC
T ss_pred CCCC------CCCEEEEEEEEHHHhCcCc-cCCeEEccC
Confidence 9876 8999999999999998764 689999973
No 57
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.63 E-value=4e-16 Score=154.72 Aligned_cols=107 Identities=21% Similarity=0.282 Sum_probs=92.3
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEECC-----EEEEeeeccCCCCceeccEEEEEEeCCCceEEEEEE-eC
Q 045058 595 IGILELGILNAVGLHPMKTRDGRGTSDTYCVAKYGH-----KWVRTRTLVDNLSPKYNEQYTWEVFDPATVLTVGVF-DN 668 (1005)
Q Consensus 595 ~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~g~-----~~~~T~~~~~t~nP~wne~f~~~v~~~~~~l~i~v~-d~ 668 (1005)
.|.|.|+|++|+||+++|. ..|.+||||++.+++ ..+||+++++|+||+|||+|.|.+......|.|+|| |+
T Consensus 29 ~~~L~V~v~~a~~L~~~d~--~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~ 106 (171)
T 2q3x_A 29 KGQLEVEVIRARSLTQKPG--SKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDY 106 (171)
T ss_dssp TTEEEEEEEEEESCCCCC-----CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEEC
T ss_pred CCEEEEEEEEeeCCCCCCc--CCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcC
Confidence 3899999999999997641 258899999999843 368999999999999999999998766789999999 99
Q ss_pred CCcCCCCCCCCCcccEEEEEEcccccCCCEEeeeEeeeecC
Q 045058 669 SQLGEKSNGNKDLKIGKVRIRISTLETGRIYTHSYPLLVLH 709 (1005)
Q Consensus 669 ~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~ 709 (1005)
|.++ +|++||.+.|+|+++..+.....||+|....
T Consensus 107 d~~~------~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 141 (171)
T 2q3x_A 107 GRMD------HKCFMGVAQILLEELDLSSMVIGWYKLFPPS 141 (171)
T ss_dssp STTC------SSEEEEEEEECGGGSCTTSCEEEEEECBCGG
T ss_pred CCCC------CCCEEEEEEEEHHHcccCCCcceeEECCCcc
Confidence 9776 8999999999999999888889999997443
No 58
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.63 E-value=8.3e-16 Score=147.96 Aligned_cols=113 Identities=30% Similarity=0.481 Sum_probs=95.8
Q ss_pred cceeeeccccceeEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---CeeeeeeeecCCCCCeeeeEEEEeec--CCCCcE
Q 045058 258 KTASTYDLVERMYFLYVRVVKARELPAMDLTGSIDPFVEVKIG---NYKGITKHYEKNQNPQWHQVFAFSRD--RMQASV 332 (1005)
Q Consensus 258 ~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~---~~~~kT~~~~~~~nP~wne~f~f~~~--~~~~~~ 332 (1005)
.++..|+ ...+.|.|+|++|++|+..+.++.+||||++++. ...++|++++++.||.|||+|.|.+. ++....
T Consensus 24 ~~~l~y~--~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~ 101 (143)
T 3f04_A 24 QYSLDYD--FQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKT 101 (143)
T ss_dssp EEEEEEE--TTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCE
T ss_pred EEEEEEe--CCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCE
Confidence 3444444 4558999999999999999988999999999994 45789999999999999999999876 344578
Q ss_pred EEEEEEeCC-CCCCceeEEEEEEceecCCCCCCCCCCCCeEEEeec
Q 045058 333 LEVVIKDKD-LVKDDFVGIVRFDINEVPLRVPPDSPLAPEWYRLED 377 (1005)
Q Consensus 333 l~v~V~d~~-~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~ 377 (1005)
|.|+|||++ ++++++||++.++|.++..+ .....|++|..
T Consensus 102 L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~-----~~~~~W~~L~~ 142 (143)
T 3f04_A 102 LVMAVYDFDRFSKHDIIGEFKVPMNTVDFG-----HVTEEWRDLQS 142 (143)
T ss_dssp EEEEEEECCSSSCCEEEEEEEEEGGGCCTT-----SCEEEEEECBC
T ss_pred EEEEEEeCCCCCCCceEEEEEEEHHHccCC-----CCcceEEECcC
Confidence 999999999 67899999999999999764 34678999975
No 59
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.63 E-value=1.8e-15 Score=144.69 Aligned_cols=93 Identities=27% Similarity=0.402 Sum_probs=81.6
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eEeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEeC
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYFDG-----QRFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYNN 77 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~~-----~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~ 77 (1005)
.+.|.|+|++|+||+.++..|.+||||+|++.+ .+++|+++++++||+|||+|.|.+...+ +....|.|+|||+
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~-l~~~~l~~~V~d~ 93 (138)
T 3n5a_A 15 ANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEK-LRETTIIITVMDK 93 (138)
T ss_dssp TTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGG-GGGEEEEEEEEEC
T ss_pred CCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhh-cCceEEEEEEEEC
Confidence 478999999999999999999999999999964 4789999999999999999999986543 4457899999999
Q ss_pred CCCCCCCcccEEEEEeCCcc
Q 045058 78 IGDTNSRSFLGKVCLTGNSF 97 (1005)
Q Consensus 78 ~~~~~~d~~lG~~~i~l~~l 97 (1005)
+. .++|++||++.|++.++
T Consensus 94 ~~-~~~~~~lG~~~i~l~~~ 112 (138)
T 3n5a_A 94 DK-LSRNDVIGKIYLSWKSG 112 (138)
T ss_dssp CS-SSCCEEEEEEEESSSSC
T ss_pred CC-CCCCcEEEEEEEccccC
Confidence 64 45899999999999874
No 60
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.63 E-value=7.3e-16 Score=152.85 Aligned_cols=106 Identities=23% Similarity=0.353 Sum_probs=89.5
Q ss_pred CcEEEEEEEEeecCCCCCC-CCCCCcEEEEEECC-----eEeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEE-
Q 045058 3 NLKLGVQVVGAHNLLPKDG-KGSSSAFVELYFDG-----QRFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIY- 75 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~-~g~~dpyv~v~~~~-----~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~- 75 (1005)
.+.|.|+|++|+||+.+|. .|.+||||+|++.. .++||+++++++||+|||+|.|.+... ...|.|+||
T Consensus 29 ~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~----~~~L~~~V~~ 104 (171)
T 2q3x_A 29 KGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQ----GKVLQVIVWG 104 (171)
T ss_dssp TTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCT----TEEEEEEEEE
T ss_pred CCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCC----CCEEEEEEEE
Confidence 4789999999999999995 78999999999853 378999999999999999999998543 368999999
Q ss_pred eCCCCCCCCcccEEEEEeCCcccCCCCceeeeEecccCC
Q 045058 76 NNIGDTNSRSFLGKVCLTGNSFVPLSDSVVLHYPLEKRG 114 (1005)
Q Consensus 76 d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~ 114 (1005)
|++. .++|++||++.|+|.++.... ....||+|.+..
T Consensus 105 d~d~-~~~d~~iG~~~i~l~~l~~~~-~~~~W~~L~~~~ 141 (171)
T 2q3x_A 105 DYGR-MDHKCFMGVAQILLEELDLSS-MVIGWYKLFPPS 141 (171)
T ss_dssp ECST-TCSSEEEEEEEECGGGSCTTS-CEEEEEECBCGG
T ss_pred cCCC-CCCCCEEEEEEEEHHHcccCC-CcceeEECCCcc
Confidence 8854 568999999999999987544 346899998775
No 61
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.63 E-value=7e-16 Score=145.06 Aligned_cols=90 Identities=20% Similarity=0.201 Sum_probs=74.5
Q ss_pred CCCcEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeecccc-CCCCCCceeeEEEEEeccCccccceEEEEEEEeCCC
Q 045058 1 MRNLKLGVQVVGAHNLLPKDGKGSSSAFVELYFDGQRFRTTIK-ENDLNPVWNESFYFNISDASKLHYLTLEAYIYNNIG 79 (1005)
Q Consensus 1 m~~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~T~v~-~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~~~ 79 (1005)
|+.+.|.|+|++|++|.. .|.+||||+|+ ++..+|+++ .+++||+|||+|.|.+...+ ..|.|+|||++
T Consensus 2 ~~~~~L~V~V~~A~~l~~---~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~----~~L~~~V~D~d- 71 (131)
T 2cjt_A 2 GVMSLLCVGVKKAKFDGA---QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRLD----LGLTVEVWNKG- 71 (131)
T ss_dssp CCCEEEEEEEEEEECSSC---GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCCS----SEEEEEEEECC-
T ss_pred CcceEEEEEEEEeECCCC---CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCCC----CeEEEEEEECC-
Confidence 788999999999998842 67899999999 334455544 47999999999999997543 47999999996
Q ss_pred CCCCCcccEEEEEeCCcccCCC
Q 045058 80 DTNSRSFLGKVCLTGNSFVPLS 101 (1005)
Q Consensus 80 ~~~~d~~lG~~~i~l~~l~~~~ 101 (1005)
.++|++||++.|+|.++...+
T Consensus 72 -~~~dd~iG~~~i~l~~l~~~~ 92 (131)
T 2cjt_A 72 -LIWDTMVGTVWIPLRTIRQSN 92 (131)
T ss_dssp -SSCEEEEEEEEEEGGGSCBCS
T ss_pred -CCCCCeEEEEEEEHHHhhhcC
Confidence 568999999999999986544
No 62
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.63 E-value=2.7e-15 Score=147.16 Aligned_cols=105 Identities=30% Similarity=0.377 Sum_probs=88.8
Q ss_pred CcceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEEC--C---EEEEeeeccCCCCceeccEEEEEEeCC---CceEEEE
Q 045058 593 PSIGILELGILNAVGLHPMKTRDGRGTSDTYCVAKYG--H---KWVRTRTLVDNLSPKYNEQYTWEVFDP---ATVLTVG 664 (1005)
Q Consensus 593 ~~~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~g--~---~~~~T~~~~~t~nP~wne~f~~~v~~~---~~~l~i~ 664 (1005)
+..|.|.|+|++|+||++++ ..|.+||||++.++ + ..+||+++++++||+|||.|.|.+... ...|.|+
T Consensus 22 ~~~~~L~V~v~~a~~L~~~d---~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~ 98 (159)
T 1tjx_A 22 PTAGKLTVVILEAKNLKKMD---VGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVT 98 (159)
T ss_dssp TTTTEEEEEEEEEESCCCCS---TTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEE
T ss_pred CCCCEEEEEEEEeeCCCCcc---CCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEE
Confidence 34589999999999999754 57889999999994 2 367999999999999999999998653 4689999
Q ss_pred EEeCCCcCCCCCCCCCcccEEEEEEcccc------------cCCCEEeeeEeee
Q 045058 665 VFDNSQLGEKSNGNKDLKIGKVRIRISTL------------ETGRIYTHSYPLL 706 (1005)
Q Consensus 665 v~d~~~~~~~~~~~~d~~lG~~~i~l~~l------------~~~~~~~~~~~L~ 706 (1005)
|||++.++ +|++||.+.|+|..+ ..++....||+|.
T Consensus 99 V~d~d~~~------~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~ 146 (159)
T 1tjx_A 99 VLDYDKIG------KNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQ 146 (159)
T ss_dssp EEECCSSS------CCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECB
T ss_pred EEECCCCC------CCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECc
Confidence 99999876 899999999999854 2345678899986
No 63
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.62 E-value=2.2e-15 Score=144.07 Aligned_cols=103 Identities=25% Similarity=0.350 Sum_probs=85.3
Q ss_pred CcceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEECC-----EEEEeeeccCCCCceeccEEEEEEeCCC---ceEEEE
Q 045058 593 PSIGILELGILNAVGLHPMKTRDGRGTSDTYCVAKYGH-----KWVRTRTLVDNLSPKYNEQYTWEVFDPA---TVLTVG 664 (1005)
Q Consensus 593 ~~~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~g~-----~~~~T~~~~~t~nP~wne~f~~~v~~~~---~~l~i~ 664 (1005)
+..|.|.|+|++|+||+.++ ..|.+||||++.+++ ...+|+++++++||+|||.|.|.+.... ..|.|+
T Consensus 13 ~~~~~L~v~v~~a~~L~~~d---~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~ 89 (138)
T 3n5a_A 13 PSANSIIVNIIKARNLKAMD---IGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIIT 89 (138)
T ss_dssp TTTTEEEEEEEEEESCCCCB---TTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEE
T ss_pred CCCCeEEEEEEEeeCCCCcC---CCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEE
Confidence 34589999999999999764 477899999999953 4679999999999999999999987543 689999
Q ss_pred EEeCCCcCCCCCCCCCcccEEEEEEcccccCCCEEeeeEeee
Q 045058 665 VFDNSQLGEKSNGNKDLKIGKVRIRISTLETGRIYTHSYPLL 706 (1005)
Q Consensus 665 v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~ 706 (1005)
|||++.++ +|++||.+.|+|+++..+. .+|++|.
T Consensus 90 V~d~~~~~------~~~~lG~~~i~l~~~~~~~--~~W~~l~ 123 (138)
T 3n5a_A 90 VMDKDKLS------RNDVIGKIYLSWKSGPGEV--KHWKDMI 123 (138)
T ss_dssp EEECCSSS------CCEEEEEEEESSSSCHHHH--HHHHHHH
T ss_pred EEECCCCC------CCcEEEEEEEccccCChHH--HHHHHHH
Confidence 99999876 8999999999999765332 3455554
No 64
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.62 E-value=6.7e-16 Score=148.32 Aligned_cols=116 Identities=23% Similarity=0.476 Sum_probs=96.6
Q ss_pred cceeeeccccceeEEEEEEEEeecCCCCCCCCCCCcEEEEEEC-----CeeeeeeeecCCCCCeeeeEEEEee-c--CCC
Q 045058 258 KTASTYDLVERMYFLYVRVVKARELPAMDLTGSIDPFVEVKIG-----NYKGITKHYEKNQNPQWHQVFAFSR-D--RMQ 329 (1005)
Q Consensus 258 ~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~-----~~~~kT~~~~~~~nP~wne~f~f~~-~--~~~ 329 (1005)
.++..|+ ...+.|.|+|++|++|+.++.++.+||||++++. ...++|++++++.||+|||+|.|.+ . ++.
T Consensus 11 ~~~l~y~--~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~ 88 (141)
T 1v27_A 11 SIKLWFD--KVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFR 88 (141)
T ss_dssp EEEEEEE--TTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGG
T ss_pred EEEEEEe--CCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhc
Confidence 3444554 3458999999999999999999999999999993 4678999999999999999999984 2 334
Q ss_pred CcEEEEEEEeCC-CCC--CceeEEEEEEceecCCCCCCCCCCCCeEEEeecCCCC
Q 045058 330 ASVLEVVIKDKD-LVK--DDFVGIVRFDINEVPLRVPPDSPLAPEWYRLEDKKGE 381 (1005)
Q Consensus 330 ~~~l~v~V~d~~-~~~--d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~ 381 (1005)
...|.|+|||++ .++ +++||++.++|.++... ...+||+|......
T Consensus 89 ~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~------~~~~W~~L~~~~~g 137 (141)
T 1v27_A 89 ERMLEITLWDQARVREEESEFLGEILIELETALLD------DEPHWYKLQTHDSG 137 (141)
T ss_dssp TCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCS------SEEEEEECBCCSSC
T ss_pred CCEEEEEEEECCCCcCCCCceEEEEEEEccccCCC------CCCceEECcccccC
Confidence 578999999999 555 99999999999998653 26799999987654
No 65
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.62 E-value=3.5e-15 Score=145.33 Aligned_cols=106 Identities=22% Similarity=0.281 Sum_probs=81.8
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe---EeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEeC
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYF--DGQ---RFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYNN 77 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~--~~~---~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~ 77 (1005)
.+.|.|+|++|+||+.++..|.+||||+|++ ++. +++|+++++++||+|||+|.|.+...+ +....|.|+|||+
T Consensus 29 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-l~~~~l~v~V~d~ 107 (153)
T 1w15_A 29 TNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCES-LEEISVEFLVLDS 107 (153)
T ss_dssp TTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSS-STTEEEEEEEEEC
T ss_pred CCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHH-hCceEEEEEEEeC
Confidence 4789999999999999998999999999999 443 679999999999999999999986543 4457899999999
Q ss_pred CCCCCCCcccEEEEEeCCcccCCCCceeeeEecccC
Q 045058 78 IGDTNSRSFLGKVCLTGNSFVPLSDSVVLHYPLEKR 113 (1005)
Q Consensus 78 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~ 113 (1005)
+. .++|++||++.|++.+. +.....|++|...
T Consensus 108 d~-~~~~~~lG~~~i~l~~~---~~~~~~W~~l~~~ 139 (153)
T 1w15_A 108 ER-GSRNEVIGRLVLGATAE---GSGGGHWKEICDF 139 (153)
T ss_dssp CT-TSCCEEEEEEEESTTCC---SHHHHHHHHHHHS
T ss_pred CC-CCCCcEEEEEEECCCCC---chHHHHHHHHHhC
Confidence 64 56899999999999872 2223357666543
No 66
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.62 E-value=4.8e-16 Score=149.50 Aligned_cols=114 Identities=31% Similarity=0.517 Sum_probs=96.1
Q ss_pred cceeeeccccceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCe--------------eeeeeeecCCCCCeeeeEEEE
Q 045058 258 KTASTYDLVERMYFLYVRVVKARELPAMDLTGSIDPFVEVKIGNY--------------KGITKHYEKNQNPQWHQVFAF 323 (1005)
Q Consensus 258 ~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~~--------------~~kT~~~~~~~nP~wne~f~f 323 (1005)
.++..|+ .+.|.|+|++|++|+.++.+|.+||||++++.+. .++|+++++++||.|||+|.|
T Consensus 10 ~~~l~y~----~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f 85 (142)
T 1rh8_A 10 QLQINYD----LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIY 85 (142)
T ss_dssp EEEEEEE----TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEE
T ss_pred EEEEEEc----CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEE
Confidence 4455554 4789999999999999999999999999999873 468999999999999999999
Q ss_pred e-ec--CCCCcEEEEEEEeCC-CCCCceeEEEEEEceecCCCCCCCCCCCCeEEEeecCCC
Q 045058 324 S-RD--RMQASVLEVVIKDKD-LVKDDFVGIVRFDINEVPLRVPPDSPLAPEWYRLEDKKG 380 (1005)
Q Consensus 324 ~-~~--~~~~~~l~v~V~d~~-~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~ 380 (1005)
. +. ++....|.|+|||++ .+++++||++.++|.++... ....+|++|....+
T Consensus 86 ~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~-----~~~~~W~~L~~~~~ 141 (142)
T 1rh8_A 86 KSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHL-----DNTPRWYPLKEQTE 141 (142)
T ss_dssp CSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGG-----TTCCEEEECBCCCC
T ss_pred CCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEeccccccC-----CCCCeEEECCccCC
Confidence 7 43 334578999999999 67899999999999998654 34679999987653
No 67
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.62 E-value=4.1e-15 Score=146.96 Aligned_cols=93 Identities=24% Similarity=0.343 Sum_probs=81.8
Q ss_pred CcceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEECC-----EEEEeeeccCCCCceeccEEEEEEeCC---CceEEEE
Q 045058 593 PSIGILELGILNAVGLHPMKTRDGRGTSDTYCVAKYGH-----KWVRTRTLVDNLSPKYNEQYTWEVFDP---ATVLTVG 664 (1005)
Q Consensus 593 ~~~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~g~-----~~~~T~~~~~t~nP~wne~f~~~v~~~---~~~l~i~ 664 (1005)
+..|.|.|+|++|+||++++ ..|.+||||++++++ ..+||+++++++||+|||.|.|.+... ...|.|+
T Consensus 34 ~~~~~L~V~v~~a~~L~~~d---~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~ 110 (166)
T 2cm5_A 34 TQQGGLIVGIIRCVHLAAMD---ANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDIS 110 (166)
T ss_dssp TTTTEEEEEEEEEESCCCCS---TTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEE
T ss_pred CCCCEEEEEEEEeECCCCcc---CCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEE
Confidence 34589999999999999754 478899999999965 578999999999999999999999752 4699999
Q ss_pred EEeCCCcCCCCCCCCCcccEEEEEEccccc
Q 045058 665 VFDNSQLGEKSNGNKDLKIGKVRIRISTLE 694 (1005)
Q Consensus 665 v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~ 694 (1005)
|||++.++ +|++||.+.|+|+++.
T Consensus 111 V~d~d~~~------~~~~iG~~~i~l~~~~ 134 (166)
T 2cm5_A 111 VWDYDIGK------SNDYIGGCQLGISAKG 134 (166)
T ss_dssp EEECCSSS------CCEEEEEEEEETTCCH
T ss_pred EEECCCCC------CCcEEEeEEEecccCC
Confidence 99999876 8999999999999864
No 68
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.61 E-value=1.8e-15 Score=142.30 Aligned_cols=87 Identities=23% Similarity=0.330 Sum_probs=74.7
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEECCEEEEeeecc-CCCCceeccEEEEEEeCCCceEEEEEEeCCCcCC
Q 045058 595 IGILELGILNAVGLHPMKTRDGRGTSDTYCVAKYGHKWVRTRTLV-DNLSPKYNEQYTWEVFDPATVLTVGVFDNSQLGE 673 (1005)
Q Consensus 595 ~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~g~~~~~T~~~~-~t~nP~wne~f~~~v~~~~~~l~i~v~d~~~~~~ 673 (1005)
.|.|.|+|++|++|.. .|.+||||+++ + +..+|++++ +++||+|||.|.|.+.++...|.|+|||+| ++
T Consensus 4 ~~~L~V~V~~A~~l~~------~g~~DPYv~v~-~-~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~- 73 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA------QEKFNTYVTLK-V-QNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LI- 73 (131)
T ss_dssp CEEEEEEEEEEECSSC------GGGCEEEEEEE-E-TTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SS-
T ss_pred ceEEEEEEEEeECCCC------CCCcCeEEEEE-e-cCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CC-
Confidence 4899999999998852 57889999999 3 335676665 799999999999999987788999999999 66
Q ss_pred CCCCCCCcccEEEEEEcccccCC
Q 045058 674 KSNGNKDLKIGKVRIRISTLETG 696 (1005)
Q Consensus 674 ~~~~~~d~~lG~~~i~l~~l~~~ 696 (1005)
+|++||.+.|+|+++...
T Consensus 74 -----~dd~iG~~~i~l~~l~~~ 91 (131)
T 2cjt_A 74 -----WDTMVGTVWIPLRTIRQS 91 (131)
T ss_dssp -----CEEEEEEEEEEGGGSCBC
T ss_pred -----CCCeEEEEEEEHHHhhhc
Confidence 799999999999998643
No 69
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.60 E-value=4.4e-15 Score=141.86 Aligned_cols=116 Identities=23% Similarity=0.300 Sum_probs=94.6
Q ss_pred ceeeeccccceeEEEEEEEEeecCCCCCCC-CCCCcEEEEEECC---eeeeeeeecCCCCCeeeeEEEEe-ec--CCCCc
Q 045058 259 TASTYDLVERMYFLYVRVVKARELPAMDLT-GSIDPFVEVKIGN---YKGITKHYEKNQNPQWHQVFAFS-RD--RMQAS 331 (1005)
Q Consensus 259 ~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~-g~~dPyv~v~~~~---~~~kT~~~~~~~nP~wne~f~f~-~~--~~~~~ 331 (1005)
++..|+ ...+.|.|+|++|++|+.++.. +.+||||++++.+ +.++|+++++++||+|||+|.|. +. ++...
T Consensus 13 ~~l~y~--~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~ 90 (138)
T 1ugk_A 13 FSLEYN--FERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQEL 90 (138)
T ss_dssp EEEEEE--GGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGC
T ss_pred EEEEEE--CCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccC
Confidence 344443 4568999999999999999985 8999999999964 67899999999999999999995 43 33456
Q ss_pred EEEEEEEeCC-CCCCceeEEEEEEceecCCCCCCCCCCCCeEEEeecCCC
Q 045058 332 VLEVVIKDKD-LVKDDFVGIVRFDINEVPLRVPPDSPLAPEWYRLEDKKG 380 (1005)
Q Consensus 332 ~l~v~V~d~~-~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~ 380 (1005)
.|.|+|||++ ++++++||++.++|.++.... .....|++|...+.
T Consensus 91 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~----~~~~~~~~l~~~~~ 136 (138)
T 1ugk_A 91 ALHFTILSFDRFSRDDIIGEVLIPLSGIELSE----GKMLMNREIISGPS 136 (138)
T ss_dssp EEEEEEEEECSSCCCCCCEEEEEECTTCCCTT----CCEEEEEECBSSSS
T ss_pred EEEEEEEECCCCCCCcEEEEEEEehhHccCCC----CcchhhhhhhcCCC
Confidence 8999999999 778999999999999997642 23356788877543
No 70
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.59 E-value=3.5e-15 Score=143.34 Aligned_cols=114 Identities=25% Similarity=0.413 Sum_probs=94.7
Q ss_pred cceeeeccccceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeeeecCCCCCeeeeEEEEe-ec--CCC
Q 045058 258 KTASTYDLVERMYFLYVRVVKARELPAMDLTGSIDPFVEVKIGN-----YKGITKHYEKNQNPQWHQVFAFS-RD--RMQ 329 (1005)
Q Consensus 258 ~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~-----~~~kT~~~~~~~nP~wne~f~f~-~~--~~~ 329 (1005)
.++..|+ ...+.|.|+|++|++|+..+.+|.+||||++++.+ ..++|++++++.||.|||+|.|. +. ++.
T Consensus 19 ~~~l~y~--~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~ 96 (142)
T 2chd_A 19 EFSLLYD--QDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQ 96 (142)
T ss_dssp EEEEEEE--GGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHH
T ss_pred EEEEEEe--CCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHcc
Confidence 3444454 45689999999999999999999999999999976 67899999999999999999998 43 222
Q ss_pred CcEEEEEEEeCC-CCCCceeEEEEEEceecCCCCCCCCCCCCeEEEeecC
Q 045058 330 ASVLEVVIKDKD-LVKDDFVGIVRFDINEVPLRVPPDSPLAPEWYRLEDK 378 (1005)
Q Consensus 330 ~~~l~v~V~d~~-~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~ 378 (1005)
...|.|+|||++ .+++++||++.++|.++..+ .....|+.|..+
T Consensus 97 ~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~-----~~~~~~~~L~~p 141 (142)
T 2chd_A 97 RKTLRISVCDEDKFGHNEFIGETRFSLKKLKAN-----QRKNFNICLERV 141 (142)
T ss_dssp HCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTT-----CCEEEEEECBCC
T ss_pred CCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCC-----CccEEEEecccC
Confidence 368999999999 67899999999999999764 345667777653
No 71
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.59 E-value=2.4e-15 Score=144.56 Aligned_cols=114 Identities=25% Similarity=0.362 Sum_probs=93.8
Q ss_pred ceeeeccccceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeeeecCCCCCeeeeEEEEeecC--CCCc
Q 045058 259 TASTYDLVERMYFLYVRVVKARELPAMDLTGSIDPFVEVKIGN-----YKGITKHYEKNQNPQWHQVFAFSRDR--MQAS 331 (1005)
Q Consensus 259 ~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~-----~~~kT~~~~~~~nP~wne~f~f~~~~--~~~~ 331 (1005)
++..|+ ...+.|.|+|++|++|+.++.+| +||||++++.+ ..++|+++++++||+|||+|.|.+.. +...
T Consensus 15 ~~l~y~--~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~ 91 (142)
T 2dmg_A 15 LTIRHS--SQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRR 91 (142)
T ss_dssp EEEEEE--TTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHC
T ss_pred EEEEEe--CCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcC
Confidence 444443 44589999999999999999888 99999999953 56799999999999999999998743 2345
Q ss_pred EEEEEEEeCC-CCC--CceeEEEEEEceecCCCCCCCCCCCCeEEEeecCCC
Q 045058 332 VLEVVIKDKD-LVK--DDFVGIVRFDINEVPLRVPPDSPLAPEWYRLEDKKG 380 (1005)
Q Consensus 332 ~l~v~V~d~~-~~~--d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~ 380 (1005)
.|.|+|||++ +++ +++||++.++|.++... ....+|++|....+
T Consensus 92 ~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~-----~~~~~W~~L~~~~~ 138 (142)
T 2dmg_A 92 TLDVAVKNSGGFLSKDKGLLGKVLVALASEELA-----KGWTQWYDLTEDSG 138 (142)
T ss_dssp EEEEEEEECCCSSCCSCCCCEEEEEECCCSTTT-----TCBCCBCCCBCSCS
T ss_pred EEEEEEEECCCccccCCcEEEEEEEeccccccc-----ccccceeeccCCCC
Confidence 8999999999 543 57999999999998764 25678999988654
No 72
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.57 E-value=1.1e-14 Score=142.50 Aligned_cols=118 Identities=20% Similarity=0.277 Sum_probs=89.8
Q ss_pred cceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEECCEEEEeeecc-CCCCceeccEEEEEEeCCCceEEEEEEeCCCcC
Q 045058 594 SIGILELGILNAVGLHPMKTRDGRGTSDTYCVAKYGHKWVRTRTLV-DNLSPKYNEQYTWEVFDPATVLTVGVFDNSQLG 672 (1005)
Q Consensus 594 ~~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~g~~~~~T~~~~-~t~nP~wne~f~~~v~~~~~~l~i~v~d~~~~~ 672 (1005)
..|.|+|+|++|++|.. .|.+||||+++ + +..+|++++ +++||+|||.|.|.+.+....|.|+|||+| ++
T Consensus 12 ~~~~L~V~V~~A~~l~~------~g~~DPYV~v~-~-~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~ 82 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDGA------QEKFNTYVTLK-V-QNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LI 82 (167)
T ss_dssp CCCEEEEEEEEEECSSC------GGGCEEEEEEE-E-TTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SS
T ss_pred ceEEEEEEEEEEECCCC------CCCCCeEEEEE-e-cceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CC
Confidence 46899999999998851 57889999999 3 346777776 699999999999999988789999999998 66
Q ss_pred CCCCCCCCcccEEEEEEcccccCCC------EEeeeEeeeecCCC--C--CceeeEEEEEEEEe
Q 045058 673 EKSNGNKDLKIGKVRIRISTLETGR------IYTHSYPLLVLHPT--G--VKKMGELHLAIRFS 726 (1005)
Q Consensus 673 ~~~~~~~d~~lG~~~i~l~~l~~~~------~~~~~~~L~~~~~~--~--~~~~G~i~l~~~~~ 726 (1005)
+|++||++.|+|+++.... ....||.+.....+ | ....|.++++++|.
T Consensus 83 ------~dd~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e 140 (167)
T 2cjs_A 83 ------WDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFE 140 (167)
T ss_dssp ------CCEEEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEE
T ss_pred ------CCceEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEee
Confidence 7999999999999985432 33345554432211 1 11245677888875
No 73
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.57 E-value=1.6e-14 Score=132.32 Aligned_cols=119 Identities=18% Similarity=0.217 Sum_probs=102.2
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeeccccC-CCCCCceeeEEEEEeccCccccceEEEEEEEeCCCCCC
Q 045058 4 LKLGVQVVGAHNLLPKDGKGSSSAFVELYFDGQRFRTTIKE-NDLNPVWNESFYFNISDASKLHYLTLEAYIYNNIGDTN 82 (1005)
Q Consensus 4 ~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~T~v~~-~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~~~~~~ 82 (1005)
.-|+|+|.+|.||+ |++||||.+.+.+.+++|++++ ++.||+|||.|+|++..+ ......|.|.|+|+++.+
T Consensus 21 msL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~-ld~~e~L~v~V~d~~~v~- 93 (144)
T 3l9b_A 21 MALIVHLKTVSELR-----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASS-IDRNEVLEIQIFNYSKVF- 93 (144)
T ss_dssp EEEEEEEEEEESCC-----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSC-CCTTCEEEEEEEEECTTS-
T ss_pred EEEEEEEEEecCCC-----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCC-CCCCCEEEEEEEECcccc-
Confidence 36899999999998 4799999999999999999998 699999999999999763 366789999999997655
Q ss_pred CCcccEEEEEeCCcccCCCCceeeeEecccCCCcceeeeEEEEEEEEec
Q 045058 83 SRSFLGKVCLTGNSFVPLSDSVVLHYPLEKRGIFSHVRGELGLKVYITD 131 (1005)
Q Consensus 83 ~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~~ 131 (1005)
++++||++.++|+++...+.. ..+.+|.+.+.. ...++|.+.+.|.+
T Consensus 94 ~nrlIG~~~i~Lq~lv~~~~l-~l~~~LvD~n~~-~~~a~I~l~l~Y~p 140 (144)
T 3l9b_A 94 SNKLIGTFRMVLQKVVEENRV-EVSDTLIDDNNA-IIKTSLSMEVRYQA 140 (144)
T ss_dssp CCEEEEEEEEESHHHHHHSEE-EEEEEEECTTSC-EEEEEEEEEEEEEE
T ss_pred CCCEEEEEEEEhHHhccCCeE-EEeecccCCCCC-ccccEEEEEEEecC
Confidence 999999999999999876643 457888887665 46689999998876
No 74
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.56 E-value=3.3e-14 Score=130.28 Aligned_cols=117 Identities=17% Similarity=0.254 Sum_probs=100.9
Q ss_pred eEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEECCEEEEeeecc-CCCCceeccEEEEEEeC---CCceEEEEEEeCCCc
Q 045058 596 GILELGILNAVGLHPMKTRDGRGTSDTYCVAKYGHKWVRTRTLV-DNLSPKYNEQYTWEVFD---PATVLTVGVFDNSQL 671 (1005)
Q Consensus 596 g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~g~~~~~T~~~~-~t~nP~wne~f~~~v~~---~~~~l~i~v~d~~~~ 671 (1005)
-.|+|.|.+|.||+ |++|||+++.+-+.+++|+++. .+.||+|||.|+|++.. ....|.|.|+|++.+
T Consensus 21 msL~V~l~~a~~Lp--------g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v 92 (144)
T 3l9b_A 21 MALIVHLKTVSELR--------GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKV 92 (144)
T ss_dssp EEEEEEEEEEESCC--------SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTT
T ss_pred EEEEEEEEEecCCC--------CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccc
Confidence 46899999999998 4789999999999999999998 59999999999999974 467999999999988
Q ss_pred CCCCCCCCCcccEEEEEEcccccCCCEEeeeEeeeecCCCCCceeeEEEEEEEEeec
Q 045058 672 GEKSNGNKDLKIGKVRIRISTLETGRIYTHSYPLLVLHPTGVKKMGELHLAIRFSCT 728 (1005)
Q Consensus 672 ~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~G~i~l~~~~~~~ 728 (1005)
+ ++.+||++.|+|.++..+.....+-+|...+.+ .-.++|.+.++|.++
T Consensus 93 ~------~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~--~~~a~I~l~l~Y~pp 141 (144)
T 3l9b_A 93 F------SNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNA--IIKTSLSMEVRYQAA 141 (144)
T ss_dssp S------CCEEEEEEEEESHHHHHHSEEEEEEEEECTTSC--EEEEEEEEEEEEEET
T ss_pred c------CCCEEEEEEEEhHHhccCCeEEEeecccCCCCC--ccccEEEEEEEecCC
Confidence 7 899999999999999887766677777744433 234899999998764
No 75
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.55 E-value=4.1e-14 Score=137.75 Aligned_cols=88 Identities=27% Similarity=0.358 Sum_probs=73.7
Q ss_pred EEEEEEEEeeeCCCCCCCCCCCcEEEEEE--CCe---EEeeecccCCCCCcccccEEEEEeeCC--CCCeEEEEEEeccC
Q 045058 435 YVRVNVVEAQDLVPTEKNHFPDVYVKAQI--GNQ---VLKTKICQARTLSAVWNEDLLFVAAEP--FEDHLVLTVEDRVG 507 (1005)
Q Consensus 435 ~L~V~v~~a~~L~~~d~~~~~dpyv~v~l--g~~---~~kT~~~~~~t~~P~w~e~f~f~v~~~--~~~~l~i~V~d~d~ 507 (1005)
.|.|+|++|+||+..+..+.+||||++.+ ++. .++|++++ ++.||.|||.|.|.+... ....|.|+|||++.
T Consensus 31 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~-~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d~ 109 (153)
T 1w15_A 31 TLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKK-CTPNAVFNELFVFDIPCESLEEISVEFLVLDSER 109 (153)
T ss_dssp EEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCC-SCSSEEEEEEEEEECCSSSSTTEEEEEEEEECCT
T ss_pred EEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCccc-CCCCCeecceEEEECCHHHhCceEEEEEEEeCCC
Confidence 79999999999999998899999999999 333 67999997 899999999999998765 23689999999999
Q ss_pred CCCCceeEEEEEcccc
Q 045058 508 PGKDEIIGRVIIPLSA 523 (1005)
Q Consensus 508 ~~~d~~iG~~~i~l~~ 523 (1005)
++++++||++.|++++
T Consensus 110 ~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 110 GSRNEVIGRLVLGATA 125 (153)
T ss_dssp TSCCEEEEEEEESTTC
T ss_pred CCCCcEEEEEEECCCC
Confidence 9999999999999987
No 76
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.53 E-value=3.8e-14 Score=138.72 Aligned_cols=117 Identities=17% Similarity=0.144 Sum_probs=85.4
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeeccccC-CCCCCceeeEEEEEeccCccccceEEEEEEEeCCCCCC
Q 045058 4 LKLGVQVVGAHNLLPKDGKGSSSAFVELYFDGQRFRTTIKE-NDLNPVWNESFYFNISDASKLHYLTLEAYIYNNIGDTN 82 (1005)
Q Consensus 4 ~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~T~v~~-~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~~~~~~ 82 (1005)
+.|.|+|++|++|. ..|.+||||+|+ ++..+|++++ +++||+|||+|.|.+.+.+ ..|.|+|||++ .+
T Consensus 14 ~~L~V~V~~A~~l~---~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~----~~L~~~V~D~d--~~ 82 (167)
T 2cjs_A 14 SLLCVGVKKAKFDG---AQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRLD----LGLTVEVWNKG--LI 82 (167)
T ss_dssp CEEEEEEEEEECSS---CGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCTT----SEEEEEEEECC--SS
T ss_pred EEEEEEEEEEECCC---CCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCCC----CEEEEEEEECC--CC
Confidence 58999999999874 367899999999 3445666554 7999999999999997544 47999999996 56
Q ss_pred CCcccEEEEEeCCcccCCCCc-----eeeeEecccCCCc-----ceeeeEEEEEEEEec
Q 045058 83 SRSFLGKVCLTGNSFVPLSDS-----VVLHYPLEKRGIF-----SHVRGELGLKVYITD 131 (1005)
Q Consensus 83 ~d~~lG~~~i~l~~l~~~~~~-----~~~w~~L~~~~~~-----~~~~G~i~l~~~~~~ 131 (1005)
+|++||++.|+|.++...+.. ...||.+..+.+. ...+|.+++.+.+..
T Consensus 83 ~dd~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e~ 141 (167)
T 2cjs_A 83 WDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFEL 141 (167)
T ss_dssp CCEEEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEEC
T ss_pred CCceEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEeec
Confidence 899999999999998654421 1133444432221 123556777777654
No 77
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.53 E-value=5.8e-14 Score=162.15 Aligned_cols=114 Identities=19% Similarity=0.249 Sum_probs=98.3
Q ss_pred CcceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEECCEEEEeeeccCCCCceeccEEEEEEeC--CCceEEEEEEeCCC
Q 045058 593 PSIGILELGILNAVGLHPMKTRDGRGTSDTYCVAKYGHKWVRTRTLVDNLSPKYNEQYTWEVFD--PATVLTVGVFDNSQ 670 (1005)
Q Consensus 593 ~~~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~g~~~~~T~~~~~t~nP~wne~f~~~v~~--~~~~l~i~v~d~~~ 670 (1005)
...|.|+|+|++|+||+. |..|++||||+|+++++.+||+++++++||+|||.|.|.+.+ ....|.|+|||+|.
T Consensus 391 ~~~~~L~V~V~~A~~L~~----D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~ 466 (540)
T 3nsj_A 391 RGLAHLVVSNFRAEHLWG----DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADY 466 (540)
T ss_dssp TTEEEEEEEEEEEESCCC----SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCS
T ss_pred CcccEEEEEEEEccCCCc----ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCC
Confidence 457999999999999985 457899999999999999999999999999999999999753 57899999999997
Q ss_pred cCCCCCCCCCcccEEEEEEcccccCCCEEeeeEeeeecCCCCCceeeEEEEEEEEeecc
Q 045058 671 LGEKSNGNKDLKIGKVRIRISTLETGRIYTHSYPLLVLHPTGVKKMGELHLAIRFSCTS 729 (1005)
Q Consensus 671 ~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~G~i~l~~~~~~~~ 729 (1005)
.+ +||+||.+.++|.. | ....|++|. .|+|++.+++++..
T Consensus 467 ~~------~dD~LG~~~~~L~~---g-~~~~~~~l~---------~G~l~~~~~~~c~p 506 (540)
T 3nsj_A 467 GW------DDDLLGSCDRSPHS---G-FHEVTCELN---------HGRVKFSYHAKCLP 506 (540)
T ss_dssp SS------CCEEEEEEEECCCS---E-EEEEEEECS---------SSEEEEEEEEEECT
T ss_pred CC------CCCEEEEEEEEeeC---C-cEEEEEEcC---------CeEEEEEEEEEECC
Confidence 66 89999999999973 3 356788763 39999999887744
No 78
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.51 E-value=4.9e-14 Score=166.37 Aligned_cols=119 Identities=27% Similarity=0.430 Sum_probs=102.5
Q ss_pred CcceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEECCEEEEeeeccCCCCceeccEEEEEEeCC-CceEEEEEEeCCCc
Q 045058 593 PSIGILELGILNAVGLHPMKTRDGRGTSDTYCVAKYGHKWVRTRTLVDNLSPKYNEQYTWEVFDP-ATVLTVGVFDNSQL 671 (1005)
Q Consensus 593 ~~~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~g~~~~~T~~~~~t~nP~wne~f~~~v~~~-~~~l~i~v~d~~~~ 671 (1005)
...|.|+|+|++|+||+++ |..|.+||||++.+++..++|+++++|+||+|||.|.|.+..+ ...|.|+|||+|.+
T Consensus 384 ~~~~~l~v~v~~a~~L~~~---d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~ 460 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKAC---KPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQF 460 (510)
T ss_dssp --CEEEEEEEEEEESCCCC---STTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSS
T ss_pred CCCceEEEEeceeecCCCC---CCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCC
Confidence 4579999999999999965 4578999999999999999999999999999999999999875 46899999999987
Q ss_pred CCCCCCCCCcccEEEEEEcccccCCCE----EeeeEeeeecCCCCCceeeEEEEEEEEe
Q 045058 672 GEKSNGNKDLKIGKVRIRISTLETGRI----YTHSYPLLVLHPTGVKKMGELHLAIRFS 726 (1005)
Q Consensus 672 ~~~~~~~~d~~lG~~~i~l~~l~~~~~----~~~~~~L~~~~~~~~~~~G~i~l~~~~~ 726 (1005)
+ +|++||.+.++|+++..+.. ...|++|. + ...|+|++++++.
T Consensus 461 ~------~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~-----~-~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 461 S------PDDFLGRTEIPVAKIRTEQESKGPMTRRLLLH-----E-VPTGEVWVRFDLQ 507 (510)
T ss_dssp S------SCCEEEEEEEEHHHHHHHHHHHCSCCEEEECB-----S-SSSCEEEEEEEEE
T ss_pred C------CCCceEEEEEEHHHhccccCCCCceeeeecCC-----C-CCCceEEEEEEEE
Confidence 6 89999999999999987543 57899986 2 2459999988874
No 79
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.47 E-value=3.1e-13 Score=156.10 Aligned_cols=113 Identities=22% Similarity=0.266 Sum_probs=94.5
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEeCCCCCCC
Q 045058 4 LKLGVQVVGAHNLLPKDGKGSSSAFVELYFDGQRFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYNNIGDTNS 83 (1005)
Q Consensus 4 ~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~~~~~~~ 83 (1005)
+.|.|+|++|+||.. |..|.+||||+|.++++++||+++++++||+|||+|.|.+.... ....|.|+|||+|. .++
T Consensus 394 ~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~--~~~~L~~~V~D~D~-~~~ 469 (540)
T 3nsj_A 394 AHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLS--TGGPLRVQVWDADY-GWD 469 (540)
T ss_dssp EEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETT--TCCCEEEEEEECCS-SSC
T ss_pred cEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCC--CCCEEEEEEEECCC-CCC
Confidence 689999999999998 99999999999999999999999999999999999999964321 23589999999964 458
Q ss_pred CcccEEEEEeCCcccCCCCceeeeEecccCCCcceeeeEEEEEEEEecCC
Q 045058 84 RSFLGKVCLTGNSFVPLSDSVVLHYPLEKRGIFSHVRGELGLKVYITDDP 133 (1005)
Q Consensus 84 d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~~~~ 133 (1005)
|+|||++.++|.. +. ...|++|. .|+|++++.+.=.|
T Consensus 470 dD~LG~~~~~L~~----g~-~~~~~~l~--------~G~l~~~~~~~c~p 506 (540)
T 3nsj_A 470 DDLLGSCDRSPHS----GF-HEVTCELN--------HGRVKFSYHAKCLP 506 (540)
T ss_dssp CEEEEEEEECCCS----EE-EEEEEECS--------SSEEEEEEEEEECT
T ss_pred CCEEEEEEEEeeC----Cc-EEEEEEcC--------CeEEEEEEEEEECC
Confidence 8999999999772 33 35788874 38899888776533
No 80
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.45 E-value=7.3e-13 Score=156.82 Aligned_cols=120 Identities=18% Similarity=0.253 Sum_probs=101.3
Q ss_pred CcEEEEEEEEeecCCCCCC--CCCCCcEEEEEECC-----eEeeccccCCC-CCCceeeEEEEEeccCccccceEEEEEE
Q 045058 3 NLKLGVQVVGAHNLLPKDG--KGSSSAFVELYFDG-----QRFRTTIKEND-LNPVWNESFYFNISDASKLHYLTLEAYI 74 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~--~g~~dpyv~v~~~~-----~~~~T~v~~~t-~nP~Wne~f~f~v~~~~~~~~~~l~v~V 74 (1005)
.+.|+|+|++|++|+.++. .|.+||||+|++.+ .++||++++++ +||+|||+|.|.+..++. ..|.|.|
T Consensus 496 ~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el---~~L~~~V 572 (624)
T 1djx_A 496 PERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDL---ALVRFMV 572 (624)
T ss_dssp CEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGG---CEEEEEE
T ss_pred ceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCC---CEEEEEE
Confidence 4689999999999998874 68999999999954 58999999887 999999999999976542 5899999
Q ss_pred EeCCCCCCCCcccEEEEEeCCcccCCCCceeeeEecccCCCcceeeeEEEEEEEEe
Q 045058 75 YNNIGDTNSRSFLGKVCLTGNSFVPLSDSVVLHYPLEKRGIFSHVRGELGLKVYIT 130 (1005)
Q Consensus 75 ~d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~ 130 (1005)
||+|. .++|++||++.|+|.+|..+ ..|++|....+.....|.|.+++.+.
T Consensus 573 ~D~D~-~~~dd~iG~~~ipl~~L~~G----~r~v~L~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 573 EDYDS-SSKNDFIGQSTIPWNSLKQG----YRHVHLLSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp EECCS-SSCCEEEEEEEEEGGGBCCE----EEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred EEcCC-CCCCceeEEEEEEHHHcCCC----cEEEeCCCCCcCCCCceEEEEEEEEE
Confidence 99954 56899999999999998653 36999988766545678999988775
No 81
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.45 E-value=5.1e-13 Score=158.16 Aligned_cols=122 Identities=18% Similarity=0.245 Sum_probs=101.3
Q ss_pred cceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEECC-----EEEEeeeccCC-CCceeccEEEEEEeCC-CceEEEEEE
Q 045058 594 SIGILELGILNAVGLHPMKTRDGRGTSDTYCVAKYGH-----KWVRTRTLVDN-LSPKYNEQYTWEVFDP-ATVLTVGVF 666 (1005)
Q Consensus 594 ~~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~g~-----~~~~T~~~~~t-~nP~wne~f~~~v~~~-~~~l~i~v~ 666 (1005)
..+.|+|+|++|++|++++. ...+.+||||+|.+.+ ...||++++++ +||+|||+|.|.+..+ ...|.|+||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~-~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~ 573 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNK-NKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVE 573 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSS-CSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccc-cccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEE
Confidence 56899999999999997652 1367899999999943 67899999998 9999999999999876 478999999
Q ss_pred eCCCcCCCCCCCCCcccEEEEEEcccccCCCEEeeeEeeeecCCCCCceeeEEEEEEEEe
Q 045058 667 DNSQLGEKSNGNKDLKIGKVRIRISTLETGRIYTHSYPLLVLHPTGVKKMGELHLAIRFS 726 (1005)
Q Consensus 667 d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~G~i~l~~~~~ 726 (1005)
|+|.++ +|++||.+.|||+.|..|. +|++|....+... ..|.|.+.++|+
T Consensus 574 D~D~~~------~dd~iG~~~ipl~~L~~G~---r~v~L~d~~g~~~-~~~~L~v~i~~~ 623 (624)
T 1djx_A 574 DYDSSS------KNDFIGQSTIPWNSLKQGY---RHVHLLSKNGDQH-PSATLFVKISIQ 623 (624)
T ss_dssp ECCSSS------CCEEEEEEEEEGGGBCCEE---EEEEEECTTSCEE-EEEEEEEEEEEE
T ss_pred EcCCCC------CCceeEEEEEEHHHcCCCc---EEEeCCCCCcCCC-CceEEEEEEEEE
Confidence 999876 8999999999999998864 6999975443222 358888888763
No 82
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.43 E-value=4.5e-13 Score=158.07 Aligned_cols=121 Identities=22% Similarity=0.368 Sum_probs=104.3
Q ss_pred ceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeeecCCCCCeeeeEEEEeecCCCCcEEEEEEEeCC-CCCCc
Q 045058 268 RMYFLYVRVVKARELPAMDLTGSIDPFVEVKIGNYKGITKHYEKNQNPQWHQVFAFSRDRMQASVLEVVIKDKD-LVKDD 346 (1005)
Q Consensus 268 ~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~~~~kT~~~~~~~nP~wne~f~f~~~~~~~~~l~v~V~d~~-~~~d~ 346 (1005)
..+.|.|+|++|++|+..+.+|.+||||++++++..++|+++++++||.|||+|.|.+.......|.|+|||+| +++|+
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~~d 464 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSPDD 464 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSSCC
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCCCC
Confidence 45789999999999999999999999999999999999999999999999999999998877788999999999 78899
Q ss_pred eeEEEEEEceecCCCCCCCCCCCCeEEEeecCCCCccceEEEEEEEE
Q 045058 347 FVGIVRFDINEVPLRVPPDSPLAPEWYRLEDKKGEKIKGELMLAVWI 393 (1005)
Q Consensus 347 ~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~~~~ 393 (1005)
+||++.+++.++..+.... .....|+.|.... .|+|.+++.+
T Consensus 465 ~lG~~~~~l~~l~~~~~~~-~~~~~~~~l~~~~----~G~i~l~~~l 506 (510)
T 3jzy_A 465 FLGRTEIPVAKIRTEQESK-GPMTRRLLLHEVP----TGEVWVRFDL 506 (510)
T ss_dssp EEEEEEEEHHHHHHHHHHH-CSCCEEEECBSSS----SCEEEEEEEE
T ss_pred ceEEEEEEHHHhccccCCC-CceeeeecCCCCC----CceEEEEEEE
Confidence 9999999999987542111 1257899998753 3888888765
No 83
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.42 E-value=1.6e-14 Score=166.88 Aligned_cols=124 Identities=19% Similarity=0.300 Sum_probs=21.3
Q ss_pred cceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEECCE-EEEeeeccCC---CCceeccEEEEEEeCCCceEEEEEEeC-
Q 045058 594 SIGILELGILNAVGLHPMKTRDGRGTSDTYCVAKYGHK-WVRTRTLVDN---LSPKYNEQYTWEVFDPATVLTVGVFDN- 668 (1005)
Q Consensus 594 ~~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~g~~-~~~T~~~~~t---~nP~wne~f~~~v~~~~~~l~i~v~d~- 668 (1005)
..|.|+|+|++|+||+++| ||||++.+++. +.||+++++| +||+|||+|+|.+......|.|+|||+
T Consensus 9 ~~~~L~V~VieAk~L~~~d--------dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~ 80 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPKK--------RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDS 80 (483)
T ss_dssp EEECC-----------------------------------------------------CCEECC----------------
T ss_pred eccEEEEEEEEcCCcCCCC--------CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecC
Confidence 3588999999999999643 99999999876 6799999999 999999999999766568999999994
Q ss_pred CCcCCCCCCCCCcccEEEEEEcccccCCCEEeeeEeeeecCC---------------------CCCceeeEEEEEEEEee
Q 045058 669 SQLGEKSNGNKDLKIGKVRIRISTLETGRIYTHSYPLLVLHP---------------------TGVKKMGELHLAIRFSC 727 (1005)
Q Consensus 669 ~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~---------------------~~~~~~G~i~l~~~~~~ 727 (1005)
|... ...+|++||++.|+++++..+...+.||+|..... ++....|.|+|+++|..
T Consensus 81 d~~~---~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~ 157 (483)
T 3bxj_A 81 DKKR---KKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQT 157 (483)
T ss_dssp -----------------------------CCEECC--------------------------------------CEEEEEE
T ss_pred Cccc---cCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEeee
Confidence 4200 12389999999999999998888899999964432 12234699999999865
Q ss_pred c
Q 045058 728 T 728 (1005)
Q Consensus 728 ~ 728 (1005)
.
T Consensus 158 ~ 158 (483)
T 3bxj_A 158 M 158 (483)
T ss_dssp C
T ss_pred e
Confidence 4
No 84
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.36 E-value=7.7e-13 Score=157.25 Aligned_cols=106 Identities=25% Similarity=0.317 Sum_probs=91.2
Q ss_pred CCcEEEEEEEEeecCCC---CCCCCCCCcEEEEEECC---eEeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEE
Q 045058 2 RNLKLGVQVVGAHNLLP---KDGKGSSSAFVELYFDG---QRFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIY 75 (1005)
Q Consensus 2 ~~~~l~V~v~~a~~L~~---~d~~g~~dpyv~v~~~~---~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~ 75 (1005)
+.+.|+|+|++|++|+. +|..|.+||||+|++.+ .++||+++++++||+|||+|.|.+.... ...|.|+||
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~---~~~L~~~V~ 92 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQ---ENVLEITLM 92 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTS---CCBCEEEEE
T ss_pred CccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCC---CCEEEEEEE
Confidence 35799999999999998 88889999999999984 5899999999999999999999997543 358999999
Q ss_pred eCCCCCCCCcccEEEEEeCCcccCCCCceeeeEecccC
Q 045058 76 NNIGDTNSRSFLGKVCLTGNSFVPLSDSVVLHYPLEKR 113 (1005)
Q Consensus 76 d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~ 113 (1005)
|+|. .+ |++||++.|+|.++..... ...|++|.+.
T Consensus 93 D~D~-~~-ddfIG~v~I~L~~L~~g~~-~~~w~~L~~~ 127 (749)
T 1cjy_A 93 DANY-VM-DETLGTATFTVSSMKVGEK-KEVPFIFNQV 127 (749)
T ss_dssp ECCS-SS-CEEEEEECCBSTTSCTTCC-CCEEEEETTT
T ss_pred ECCC-CC-CceeEEEEEEHHHcCCCCc-eEEEEecCCC
Confidence 9965 45 9999999999999866543 3579999765
No 85
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.29 E-value=2.9e-13 Score=156.42 Aligned_cols=119 Identities=22% Similarity=0.233 Sum_probs=18.8
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEECCe-EeeccccCCC---CCCceeeEEEEEeccCccccceEEEEEEEeC-
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYFDGQ-RFRTTIKEND---LNPVWNESFYFNISDASKLHYLTLEAYIYNN- 77 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~-~~~T~v~~~t---~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~- 77 (1005)
.+.|+|+|++|+||+++| ||||+++++++ ..||+++++| +||+|||+|.|.+... ...|.|.|||+
T Consensus 10 ~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~----~~~L~v~V~d~~ 80 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPKK-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPA----VRALRLHLYRDS 80 (483)
T ss_dssp EECC--------------------------------------------------CCEECC--------------------
T ss_pred ccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCC----ccEEEEEEEecC
Confidence 367999999999999876 99999999886 6799999999 9999999999996432 25899999995
Q ss_pred CC--CCCCCcccEEEEEeCCcccCCCCceeeeEecccCCC----------------------cceeeeEEEEEEEEec
Q 045058 78 IG--DTNSRSFLGKVCLTGNSFVPLSDSVVLHYPLEKRGI----------------------FSHVRGELGLKVYITD 131 (1005)
Q Consensus 78 ~~--~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~----------------------~~~~~G~i~l~~~~~~ 131 (1005)
+. ..++|++||++.|++.++..+.. .+.||+|..... .....|.|++++.+..
T Consensus 81 d~~~~~~~d~~lG~v~i~l~~l~~~~~-~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~ 157 (483)
T 3bxj_A 81 DKKRKKDKAGYVGLVTVPVATLAGRHF-TEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQT 157 (483)
T ss_dssp --------------------------C-CEECC--------------------------------------CEEEEEE
T ss_pred CccccCCCCceEEEEEEEHHHhcCCCC-CCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEeee
Confidence 31 24589999999999999876543 468999954321 1235699999998877
No 86
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.28 E-value=3.8e-12 Score=151.39 Aligned_cols=105 Identities=24% Similarity=0.441 Sum_probs=93.0
Q ss_pred ceeEEEEEEEEeecCCC---CCCCCCCCcEEEEEECC---eeeeeeeecCCCCCeeeeEEEEeecCCCCcEEEEEEEeCC
Q 045058 268 RMYFLYVRVVKARELPA---MDLTGSIDPFVEVKIGN---YKGITKHYEKNQNPQWHQVFAFSRDRMQASVLEVVIKDKD 341 (1005)
Q Consensus 268 ~~~~L~V~v~~a~~L~~---~~~~g~~dPyv~v~~~~---~~~kT~~~~~~~nP~wne~f~f~~~~~~~~~l~v~V~d~~ 341 (1005)
+.+.|.|+|++|++|+. +|..|.+||||++++++ .++||+++++++||+|||+|.|.+.......|.|+|||+|
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~D 95 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDAN 95 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEECC
T ss_pred CccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEECC
Confidence 35889999999999998 78789999999999985 5789999999999999999999998766678999999999
Q ss_pred -CCCCceeEEEEEEceecCCCCCCCCCCCCeEEEeecC
Q 045058 342 -LVKDDFVGIVRFDINEVPLRVPPDSPLAPEWYRLEDK 378 (1005)
Q Consensus 342 -~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~ 378 (1005)
++ |++||++.++|.++..+ .....|++|...
T Consensus 96 ~~~-ddfIG~v~I~L~~L~~g-----~~~~~w~~L~~~ 127 (749)
T 1cjy_A 96 YVM-DETLGTATFTVSSMKVG-----EKKEVPFIFNQV 127 (749)
T ss_dssp SSS-CEEEEEECCBSTTSCTT-----CCCCEEEEETTT
T ss_pred CCC-CceeEEEEEEHHHcCCC-----CceEEEEecCCC
Confidence 66 99999999999999654 346789999754
No 87
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.12 E-value=3.1e-10 Score=137.14 Aligned_cols=112 Identities=21% Similarity=0.285 Sum_probs=93.0
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eEeeccccCC-CCCCceee-EEEEE-eccCccccceEEEEEE
Q 045058 4 LKLGVQVVGAHNLLPKDGKGSSSAFVELYFDG------QRFRTTIKEN-DLNPVWNE-SFYFN-ISDASKLHYLTLEAYI 74 (1005)
Q Consensus 4 ~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~~------~~~~T~v~~~-t~nP~Wne-~f~f~-v~~~~~~~~~~l~v~V 74 (1005)
..|.|+|++|++|+.+ .+||||+|.+.+ .++||+++++ ++||+||| +|.|. +..++ ...|.|.|
T Consensus 725 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pe---la~Lrf~V 797 (885)
T 3ohm_B 725 NALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPT---LASLRIAA 797 (885)
T ss_dssp EEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGG---GCEEEEEE
T ss_pred eEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCC---cCEEEEEE
Confidence 4799999999999853 589999999965 3579998865 69999999 69998 75554 24799999
Q ss_pred EeCCCCCCCCcccEEEEEeCCcccCCCCceeeeEecccCCCcceeeeEEEEEEEEec
Q 045058 75 YNNIGDTNSRSFLGKVCLTGNSFVPLSDSVVLHYPLEKRGIFSHVRGELGLKVYITD 131 (1005)
Q Consensus 75 ~d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~~ 131 (1005)
||++ ++|||++.|+|..|..+ ..+++|....+..-..|.|.+.+.+.+
T Consensus 798 ~D~d-----ddfiG~~~lpL~~L~~G----yR~vpL~~~~g~~l~~atLfv~i~~~~ 845 (885)
T 3ohm_B 798 FEEG-----GKFVGHRILPVSAIRSG----YHYVCLRNEANQPLCLPALLIYTEASD 845 (885)
T ss_dssp EETT-----TEEEEEEEEETTTCCCE----EEEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred EcCC-----ccEEeeEEEEHHHcCCC----ceEEEecCCCCCccCceEEEEEEEEEe
Confidence 9973 78999999999998653 357999888776667899999999887
No 88
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.11 E-value=5.6e-10 Score=134.31 Aligned_cols=112 Identities=21% Similarity=0.347 Sum_probs=93.7
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-------eEeeccccCC-CCCCceeeE-EEEE-eccCccccceEEEEE
Q 045058 4 LKLGVQVVGAHNLLPKDGKGSSSAFVELYFDG-------QRFRTTIKEN-DLNPVWNES-FYFN-ISDASKLHYLTLEAY 73 (1005)
Q Consensus 4 ~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~~-------~~~~T~v~~~-t~nP~Wne~-f~f~-v~~~~~~~~~~l~v~ 73 (1005)
+.|.|+|++|++|+.+ .+||||+|.+.+ .++||+++++ ++||+|||+ |.|. +..++. ..|.|.
T Consensus 650 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pel---a~Lrf~ 722 (816)
T 3qr0_A 650 GTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDL---AVVRII 722 (816)
T ss_dssp EEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGG---CEEEEE
T ss_pred eEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCc---cEEEEE
Confidence 5799999999999853 589999999865 5789998775 699999998 9998 765542 589999
Q ss_pred EEeCCCCCCCCcccEEEEEeCCcccCCCCceeeeEecccCCCcceeeeEEEEEEEEec
Q 045058 74 IYNNIGDTNSRSFLGKVCLTGNSFVPLSDSVVLHYPLEKRGIFSHVRGELGLKVYITD 131 (1005)
Q Consensus 74 V~d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~~ 131 (1005)
|||+ .++|||++.++|..|..+ ..+++|....+..-..+.|.+.+.+.+
T Consensus 723 V~D~-----dddfiG~~~ipL~~L~~G----yR~vpL~~~~g~~~~~atLfv~i~~~~ 771 (816)
T 3qr0_A 723 VSEE-----NGKFIGHRVMPLDGIKPG----YRHVPLRNESNRPLGLASVFAHIVAKD 771 (816)
T ss_dssp EEET-----TSCEEEEEEEESTTCCCE----EEEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred EEec-----CCCeeeEEEEEHHHcCCc----ceEEEEeCCCCCCCCceEEEEEEEEEe
Confidence 9997 378999999999998763 357999988776566799999998887
No 89
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.10 E-value=3.5e-10 Score=136.09 Aligned_cols=111 Identities=19% Similarity=0.299 Sum_probs=90.7
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEECC-------EEEEeeeccC-CCCceeccE-EEEE-EeCC-CceEEE
Q 045058 595 IGILELGILNAVGLHPMKTRDGRGTSDTYCVAKYGH-------KWVRTRTLVD-NLSPKYNEQ-YTWE-VFDP-ATVLTV 663 (1005)
Q Consensus 595 ~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~g~-------~~~~T~~~~~-t~nP~wne~-f~~~-v~~~-~~~l~i 663 (1005)
.+.|+|+|++|++|+. ..+||||+|.+.+ +.+||+++++ ++||+|||+ |.|. |..+ ...|.|
T Consensus 649 ~~~L~V~Visaq~L~~-------~~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf 721 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSD-------KQISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRI 721 (816)
T ss_dssp CEEEEEEEEEEECCCS-------SCCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEE
T ss_pred ceEEEEEEEEcccCCC-------CCCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEE
Confidence 4899999999999983 3689999999954 5789999986 599999998 9998 7654 468999
Q ss_pred EEEeCCCcCCCCCCCCCcccEEEEEEcccccCCCEEeeeEeeeecCCCCCceeeEEEEEEEEe
Q 045058 664 GVFDNSQLGEKSNGNKDLKIGKVRIRISTLETGRIYTHSYPLLVLHPTGVKKMGELHLAIRFS 726 (1005)
Q Consensus 664 ~v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~G~i~l~~~~~ 726 (1005)
.|||+ .+++||.+.|||+.|..|- +++||....+... ..++|.+.+.+.
T Consensus 722 ~V~D~----------dddfiG~~~ipL~~L~~Gy---R~vpL~~~~g~~~-~~atLfv~i~~~ 770 (816)
T 3qr0_A 722 IVSEE----------NGKFIGHRVMPLDGIKPGY---RHVPLRNESNRPL-GLASVFAHIVAK 770 (816)
T ss_dssp EEEET----------TSCEEEEEEEESTTCCCEE---EEEEEECTTSCEE-EEEEEEEEEEEE
T ss_pred EEEec----------CCCeeeEEEEEHHHcCCcc---eEEEEeCCCCCCC-CceEEEEEEEEE
Confidence 99998 3799999999999999874 6799985443322 248888888875
No 90
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.08 E-value=1.8e-10 Score=139.68 Aligned_cols=107 Identities=25% Similarity=0.358 Sum_probs=91.7
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEeC
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYF-----DGQRFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYNN 77 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~-----~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~ 77 (1005)
.+.|.|+|++|++|.++|..|.+||||++++ ...+++|+++++++||+|||+|.|.+...+ ....|.|+|||+
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~--~~~~L~v~v~d~ 248 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESD--KDRRLSVEIWDW 248 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTT--TTCEEEEEEEEC
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCC--ccceeeeEEeec
Confidence 4679999999999999999999999999998 345799999999999999999999986543 234699999999
Q ss_pred CCCCCCCcccEEEEEeCCcccCCCCceeeeEecccCC
Q 045058 78 IGDTNSRSFLGKVCLTGNSFVPLSDSVVLHYPLEKRG 114 (1005)
Q Consensus 78 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~ 114 (1005)
+. .++|++||++.+++.++...+. ..|+.|....
T Consensus 249 d~-~~~dd~iG~~~i~l~~l~~~~~--~~w~~Lls~~ 282 (674)
T 3pfq_A 249 DL-TSRNDFMGSLSFGISELQKAGV--DGWFKLLSQE 282 (674)
T ss_dssp CS-SSCCEECCBCCCBTTHHHHCCE--EEEEECBCTT
T ss_pred cc-ccccccccccccchhhhccCCc--ccceeecccc
Confidence 64 5699999999999999877553 5799987653
No 91
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.07 E-value=2.7e-10 Score=137.69 Aligned_cols=111 Identities=18% Similarity=0.240 Sum_probs=89.7
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEECC------EEEEeeeccC-CCCceecc-EEEEE-EeCC-CceEEEE
Q 045058 595 IGILELGILNAVGLHPMKTRDGRGTSDTYCVAKYGH------KWVRTRTLVD-NLSPKYNE-QYTWE-VFDP-ATVLTVG 664 (1005)
Q Consensus 595 ~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~g~------~~~~T~~~~~-t~nP~wne-~f~~~-v~~~-~~~l~i~ 664 (1005)
...|+|+|++|++|+. ..+||||+|.+.+ ..+||+++.+ ++||+||| .|.|. |..+ ...|.|+
T Consensus 724 ~~~L~V~Visaq~L~~-------~~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~ 796 (885)
T 3ohm_B 724 ANALRVKVISGQFLSD-------RKVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIA 796 (885)
T ss_dssp CEEEEEEEEEEESCCS-------SCCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEE
T ss_pred ceEEEEEEEEeccCcc-------cCCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEE
Confidence 3589999999999983 3689999999953 2479999986 59999999 69998 6554 4689999
Q ss_pred EEeCCCcCCCCCCCCCcccEEEEEEcccccCCCEEeeeEeeeecCCCCCceeeEEEEEEEEe
Q 045058 665 VFDNSQLGEKSNGNKDLKIGKVRIRISTLETGRIYTHSYPLLVLHPTGVKKMGELHLAIRFS 726 (1005)
Q Consensus 665 v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~G~i~l~~~~~ 726 (1005)
|||+| +++||.+.|||+.|..|- +++||....+... ..|.|.+.+.+.
T Consensus 797 V~D~d----------ddfiG~~~lpL~~L~~Gy---R~vpL~~~~g~~l-~~atLfv~i~~~ 844 (885)
T 3ohm_B 797 AFEEG----------GKFVGHRILPVSAIRSGY---HYVCLRNEANQPL-CLPALLIYTEAS 844 (885)
T ss_dssp EEETT----------TEEEEEEEEETTTCCCEE---EEEEEECTTSCEE-EEEEEEEEEEEE
T ss_pred EEcCC----------ccEEeeEEEEHHHcCCCc---eEEEecCCCCCcc-CceEEEEEEEEE
Confidence 99983 799999999999999874 5789975443322 358999999875
No 92
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.07 E-value=9.1e-10 Score=133.51 Aligned_cols=112 Identities=24% Similarity=0.340 Sum_probs=89.8
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eEeecc-ccC-CCCCCceee-EEEE-EeccCccccceEEEE
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYFDG------QRFRTT-IKE-NDLNPVWNE-SFYF-NISDASKLHYLTLEA 72 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~~------~~~~T~-v~~-~t~nP~Wne-~f~f-~v~~~~~~~~~~l~v 72 (1005)
.+.|.|+|++|++|+. +.+||||+|.+.+ +++||+ +++ +++||+||| +|.| .+..++. ..|.|
T Consensus 677 ~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el---~~Lr~ 749 (799)
T 2zkm_X 677 ATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPEL---ASLRV 749 (799)
T ss_dssp CEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGG---CEEEE
T ss_pred eeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCc---cEEEE
Confidence 3689999999999985 4689999999943 367999 775 579999999 7999 7865542 47999
Q ss_pred EEEeCCCCCCCCcccEEEEEeCCcccCCCCceeeeEecccCCCcceeeeEEEEEEEEe
Q 045058 73 YIYNNIGDTNSRSFLGKVCLTGNSFVPLSDSVVLHYPLEKRGIFSHVRGELGLKVYIT 130 (1005)
Q Consensus 73 ~V~d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~ 130 (1005)
.|||++ +++||++.|+|..|..+ ..|++|....+..-..+.|.+++.+.
T Consensus 750 ~V~D~d-----~d~iG~~~ipl~~L~~G----~r~v~L~~~~g~~~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 750 AVMEEG-----NKFLGHRIIPINALNSG----YHHLCLHSESNMPLTMPALFIFLEMK 798 (799)
T ss_dssp EEEETT-----TEEEEEEEEEGGGBCCE----EEEEEEECTTCCEEEEEEEEEEEEEE
T ss_pred EEEEeC-----CCccceEeeehhhcCCC----cEEEeccCCCCCCCCceEEEEEEEEE
Confidence 999973 78999999999998653 45899987765545568888888764
No 93
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.04 E-value=2.9e-10 Score=137.91 Aligned_cols=104 Identities=24% Similarity=0.391 Sum_probs=91.0
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEE-----CCEEEEeeeccCCCCceeccEEEEEEeC--CCceEEEEEEe
Q 045058 595 IGILELGILNAVGLHPMKTRDGRGTSDTYCVAKY-----GHKWVRTRTLVDNLSPKYNEQYTWEVFD--PATVLTVGVFD 667 (1005)
Q Consensus 595 ~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~-----g~~~~~T~~~~~t~nP~wne~f~~~v~~--~~~~l~i~v~d 667 (1005)
.+.|.|.|++|++|.++| ..|.+||||++.+ +....+|+++++++||+|||.|.|.+.. ....|.|+|||
T Consensus 171 ~~~L~V~v~~a~~L~~~d---~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d 247 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMD---PNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWD 247 (674)
T ss_dssp SSEEEEEEEEEESCCCCS---TTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEE
T ss_pred cceeeeeeecccccCCCC---cccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEee
Confidence 478999999999999765 5789999999999 4456899999999999999999999874 35679999999
Q ss_pred CCCcCCCCCCCCCcccEEEEEEcccccCCCEEeeeEeeeec
Q 045058 668 NSQLGEKSNGNKDLKIGKVRIRISTLETGRIYTHSYPLLVL 708 (1005)
Q Consensus 668 ~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 708 (1005)
+|.++ +|++||.+.++|+++..... ..||+|...
T Consensus 248 ~d~~~------~dd~iG~~~i~l~~l~~~~~-~~w~~Lls~ 281 (674)
T 3pfq_A 248 WDLTS------RNDFMGSLSFGISELQKAGV-DGWFKLLSQ 281 (674)
T ss_dssp CCSSS------CCEECCBCCCBTTHHHHCCE-EEEEECBCT
T ss_pred ccccc------ccccccccccchhhhccCCc-ccceeeccc
Confidence 99877 89999999999999987664 899999743
No 94
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.03 E-value=7.2e-10 Score=134.41 Aligned_cols=112 Identities=20% Similarity=0.351 Sum_probs=89.1
Q ss_pred cceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEE-C---C--EEEEee-eccC-CCCceecc-EEEE-EEeCC-CceEE
Q 045058 594 SIGILELGILNAVGLHPMKTRDGRGTSDTYCVAKY-G---H--KWVRTR-TLVD-NLSPKYNE-QYTW-EVFDP-ATVLT 662 (1005)
Q Consensus 594 ~~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~-g---~--~~~~T~-~~~~-t~nP~wne-~f~~-~v~~~-~~~l~ 662 (1005)
..|.|+|+|++|++|+. +.+||||+|.+ | . +++||+ ++++ ++||+||| .|.| .|..+ -..|.
T Consensus 676 ~~~~L~V~Visa~~L~~-------~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr 748 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE-------RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLR 748 (799)
T ss_dssp TCEEEEEEEEEEESCCS-------SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEE
T ss_pred eeeeEEEEEEeccccCc-------cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEE
Confidence 46899999999999983 46899999999 4 1 357999 8875 59999999 6999 78654 45899
Q ss_pred EEEEeCCCcCCCCCCCCCcccEEEEEEcccccCCCEEeeeEeeeecCCCCCceeeEEEEEEEEe
Q 045058 663 VGVFDNSQLGEKSNGNKDLKIGKVRIRISTLETGRIYTHSYPLLVLHPTGVKKMGELHLAIRFS 726 (1005)
Q Consensus 663 i~v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~G~i~l~~~~~ 726 (1005)
|.|||++ +++||.+.|||+.|..|. ++++|....+... ..+.|.+.++++
T Consensus 749 ~~V~D~d----------~d~iG~~~ipl~~L~~G~---r~v~L~~~~g~~~-~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 749 VAVMEEG----------NKFLGHRIIPINALNSGY---HHLCLHSESNMPL-TMPALFIFLEMK 798 (799)
T ss_dssp EEEEETT----------TEEEEEEEEEGGGBCCEE---EEEEEECTTCCEE-EEEEEEEEEEEE
T ss_pred EEEEEeC----------CCccceEeeehhhcCCCc---EEEeccCCCCCCC-CceEEEEEEEEE
Confidence 9999983 799999999999998874 6889975443222 347888877763
No 95
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.97 E-value=4.3e-09 Score=93.31 Aligned_cols=110 Identities=11% Similarity=0.136 Sum_probs=85.1
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECCe----Eeec-cccCCCCCCceeeEEEEEeccCccccceEEEEEEEeCC
Q 045058 4 LKLGVQVVGAHNLLPKDGKGSSSAFVELYFDGQ----RFRT-TIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYNNI 78 (1005)
Q Consensus 4 ~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~----~~~T-~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~~ 78 (1005)
..|+|.+.++.--..+......||||.|.++.. +.+| ..+++|..|+|||+|.-.+.+.. .|.|.|++..
T Consensus 6 ~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~Gr-----~l~i~Vfh~a 80 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYEGR-----VIQIVLMRAA 80 (126)
T ss_dssp CEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCTTC-----EEEEEEEEET
T ss_pred ccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeCCE-----EEEEEEEcCC
Confidence 567888877663332223346899999999754 2365 78889999999999999997654 8999999852
Q ss_pred CCCCCCcccEEEEEeCCcccC----CCCceeeeEecccCCCcceeeeEEEEEEEEe
Q 045058 79 GDTNSRSFLGKVCLTGNSFVP----LSDSVVLHYPLEKRGIFSHVRGELGLKVYIT 130 (1005)
Q Consensus 79 ~~~~~d~~lG~~~i~l~~l~~----~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~ 130 (1005)
.+|+..|+|++.+|.. .+...+.|++|++ +|+|++.+.+.
T Consensus 81 -----~~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP-------~Gkl~~~i~~~ 124 (126)
T 1yrk_A 81 -----EEPVSEVTVGVSVLAERCKKNNGKAEFWLDLQP-------QAKVLMSVQYF 124 (126)
T ss_dssp -----TEEEEEEEEEHHHHHHHHHTTTTEEEEEEECBS-------SCEEEEEEEEE
T ss_pred -----CCeeeEEEEEHHHHHhhhccCCCceEEEEeccc-------CcEEEEEEEEe
Confidence 2899999999999863 2456689999965 68999988775
No 96
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.97 E-value=3.3e-09 Score=95.21 Aligned_cols=111 Identities=8% Similarity=0.108 Sum_probs=86.9
Q ss_pred cEEEEEEEEeecCCCCC-CCCCCCcEEEEEECCe----Eeec-cccCCCCCCceeeEEEEEeccCccccceEEEEEEEeC
Q 045058 4 LKLGVQVVGAHNLLPKD-GKGSSSAFVELYFDGQ----RFRT-TIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYNN 77 (1005)
Q Consensus 4 ~~l~V~v~~a~~L~~~d-~~g~~dpyv~v~~~~~----~~~T-~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~ 77 (1005)
..|+|.+.+..--..+. ..-..||||.|.++.. +.+| ..+++|..|+|||+|.-.+.+.. .|.|.|++.
T Consensus 10 ~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~Gr-----~l~i~Vfh~ 84 (138)
T 2enj_A 10 PFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINKGR-----VMQIIVKGK 84 (138)
T ss_dssp CCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCSSC-----EEEEEEECS
T ss_pred cceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEECCe-----EEEEEEEcC
Confidence 56888887777544332 2336899999999754 3777 78888999999999999987654 899999975
Q ss_pred CCCCCCCcccEEEEEeCCcccCC----CCceeeeEecccCCCcceeeeEEEEEEEEec
Q 045058 78 IGDTNSRSFLGKVCLTGNSFVPL----SDSVVLHYPLEKRGIFSHVRGELGLKVYITD 131 (1005)
Q Consensus 78 ~~~~~~d~~lG~~~i~l~~l~~~----~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~~ 131 (1005)
. .+|+..|+|++.+|... +...+.|++|++ +|+|++.+.+.-
T Consensus 85 a-----~~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP-------~Gkl~v~i~~~~ 130 (138)
T 2enj_A 85 N-----VDLISETTVELYSLAERCRKNNGKTEIWLELKP-------QGRMLMNARYFL 130 (138)
T ss_dssp S-----CSCCEEEEEESHHHHHHHHHTTTCEEEEEECBS-------SCEEEEEEEECC
T ss_pred C-----CCeeeEEEEEHHHHHhhhccCCCceEEEEeccc-------CcEEEEEEEEEE
Confidence 2 28999999999998632 456689999965 689999998865
No 97
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.66 E-value=1.3e-07 Score=83.86 Aligned_cols=114 Identities=18% Similarity=0.237 Sum_probs=84.6
Q ss_pred eEEEEEEEEeecCCCCCCCCCCCcEEEEEECCee----eee-eeecCCCCCeeeeEEEEeecCCCCcEEEEEEEeCCCCC
Q 045058 270 YFLYVRVVKARELPAMDLTGSIDPFVEVKIGNYK----GIT-KHYEKNQNPQWHQVFAFSRDRMQASVLEVVIKDKDLVK 344 (1005)
Q Consensus 270 ~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~~~----~kT-~~~~~~~nP~wne~f~f~~~~~~~~~l~v~V~d~~~~~ 344 (1005)
..|+|.+.+..--.........||||.|.+.... .+| .+.++|..|.||++|.-.+.+ ...|.|.|++...
T Consensus 6 ~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~-- 81 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAAE-- 81 (126)
T ss_dssp CEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT--TCEEEEEEEEETT--
T ss_pred ccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC--CEEEEEEEEcCCC--
Confidence 4688888776542222233468999999997633 255 667789999999999999887 4579999997654
Q ss_pred CceeEEEEEEceecCCCCCCCCCCCCeEEEeecCCCCccceEEEEEEEEe
Q 045058 345 DDFVGIVRFDINEVPLRVPPDSPLAPEWYRLEDKKGEKIKGELMLAVWIG 394 (1005)
Q Consensus 345 d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~~~~~ 394 (1005)
+|++.|++.+.+|..+-........-|+.|+.. |+|++.+.+.
T Consensus 82 -~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP~------Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 -EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQPQ------AKVLMSVQYF 124 (126)
T ss_dssp -EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBSS------CEEEEEEEEE
T ss_pred -CeeeEEEEEHHHHHhhhccCCCceEEEEecccC------cEEEEEEEEe
Confidence 999999999999984310011346789999874 8899988654
No 98
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.61 E-value=3.5e-07 Score=82.21 Aligned_cols=110 Identities=12% Similarity=0.116 Sum_probs=83.9
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCCCCcEEEEEECCEE----EEe-eeccCCCCceeccEEEEEEeCCCceEEEEEEeCC
Q 045058 595 IGILELGILNAVGLHPMKTRDGRGTSDTYCVAKYGHKW----VRT-RTLVDNLSPKYNEQYTWEVFDPATVLTVGVFDNS 669 (1005)
Q Consensus 595 ~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~~~g~~~----~~T-~~~~~t~nP~wne~f~~~v~~~~~~l~i~v~d~~ 669 (1005)
.+.|+|.+.++.-.+-+. ......||||.|.+.... -+| .+.++|..|+||+.|.-.|.+ ...|+|.||+.
T Consensus 9 ~~flRi~l~~~~~~~~~~--~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh~- 84 (138)
T 2enj_A 9 SPFLRIGLSNFDCGSCQS--CQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK-GRVMQIIVKGK- 84 (138)
T ss_dssp CCCEEEEEEEEECCCCCC--SCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS-SCEEEEEEECS-
T ss_pred CcceEEEeeccccCCCCC--cccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC-CeEEEEEEEcC-
Confidence 367888887776433210 013357999999986542 567 677789999999999888766 55999999965
Q ss_pred CcCCCCCCCCCcccEEEEEEccccc-----CCCEEeeeEeeeecCCCCCceeeEEEEEEEE
Q 045058 670 QLGEKSNGNKDLKIGKVRIRISTLE-----TGRIYTHSYPLLVLHPTGVKKMGELHLAIRF 725 (1005)
Q Consensus 670 ~~~~~~~~~~d~~lG~~~i~l~~l~-----~~~~~~~~~~L~~~~~~~~~~~G~i~l~~~~ 725 (1005)
..+||..+.|++.+|. .+...+.|..|. ..|+|++.+++
T Consensus 85 ---------a~~fVAn~tV~~edL~~~ck~~~g~~e~WvdLe--------P~Gkl~v~i~~ 128 (138)
T 2enj_A 85 ---------NVDLISETTVELYSLAERCRKNNGKTEIWLELK--------PQGRMLMNARY 128 (138)
T ss_dssp ---------SCSCCEEEEEESHHHHHHHHHTTTCEEEEEECB--------SSCEEEEEEEE
T ss_pred ---------CCCeeeEEEEEHHHHHhhhccCCCceEEEEecc--------cCcEEEEEEEE
Confidence 3499999999999987 345678999995 35999999997
No 99
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=88.74 E-value=6.1 Score=39.04 Aligned_cols=72 Identities=14% Similarity=0.145 Sum_probs=48.5
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---------------C----eEeeccccCCCCCCceeeEEEEEeccCcc
Q 045058 4 LKLGVQVVGAHNLLPKDGKGSSSAFVELYFD---------------G----QRFRTTIKENDLNPVWNESFYFNISDASK 64 (1005)
Q Consensus 4 ~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~~---------------~----~~~~T~v~~~t~nP~Wne~f~f~v~~~~~ 64 (1005)
..|.|++.++. +........-|--|.|++. + ..++|.|.+.+.+|.|+|++.+.++-..
T Consensus 27 NdLYVtl~~g~-F~~~~k~~aRNIeV~vevr~~~G~~i~~~I~~~sg~~~~se~~S~V~YHnk~P~w~EtIKi~LP~~~- 104 (220)
T 3l4c_A 27 NDIYVTLVQGD-FDKGSKTTAKNVEVTVSVYDEDGKRLEHVIFPGAGDEAISEYKSVIYYQVKQPRWFETVKVAIPIED- 104 (220)
T ss_dssp EEEEEEEEEEE-CCCSSSSSCCCEEEEEEEEETTSCBCCSCEECTTCCSCBSCEECCCCTTCSSCCCCEEEEEEECTTS-
T ss_pred ccEEEEeeEeE-ECCCCCCCcceEEEEEEEEcCCCCCcccCEEcCCCCCCceeEEEEEEEcCCCCCceEeEEEeeChhh-
Confidence 46777888775 3221112223545555540 1 2478889999999999999999996543
Q ss_pred ccceEEEEEEEeC
Q 045058 65 LHYLTLEAYIYNN 77 (1005)
Q Consensus 65 ~~~~~l~v~V~d~ 77 (1005)
.....|.|++++.
T Consensus 105 ~~~~HLlFtFrH~ 117 (220)
T 3l4c_A 105 VNRSHLRFTFRHR 117 (220)
T ss_dssp STTEEEEEEEEEC
T ss_pred cCCeEEEEEEEEe
Confidence 5667899999886
No 100
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=87.17 E-value=1.2 Score=41.38 Aligned_cols=123 Identities=9% Similarity=0.088 Sum_probs=79.4
Q ss_pred ceeEEEEEEEEeecCCCC-CCCCCCCcEEEEEE--CCee-eeeeeecCCCCCeeeeEEEEeecCC-------CCcEEEEE
Q 045058 268 RMYFLYVRVVKARELPAM-DLTGSIDPFVEVKI--GNYK-GITKHYEKNQNPQWHQVFAFSRDRM-------QASVLEVV 336 (1005)
Q Consensus 268 ~~~~L~V~v~~a~~L~~~-~~~g~~dPyv~v~~--~~~~-~kT~~~~~~~nP~wne~f~f~~~~~-------~~~~l~v~ 336 (1005)
..+.+.|+|.++.--+.. ...+..+|..-+.+ -... ..|.+ ....+|.+|-+-.|.+... ....+.++
T Consensus 16 gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv-~~G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~lE 94 (156)
T 2yrb_A 16 GENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPV-VRGLHPEYNFTSQYLVHVNDLFLQYIQKNTITLE 94 (156)
T ss_dssp SCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCC-EESSSCCCCEEEEEEECCSHHHHHHHHHCCEEEE
T ss_pred CCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccc-ccCCCCCcceEEEEEEEeCHHHHHHHhcCCEEEE
Confidence 346788999988632111 01223466555544 4444 44554 4589999999888876421 23478888
Q ss_pred EEeCCCCCCceeEEEEEEceecCCCCCCCCCCCCeEEEeecCCCC-ccceEEEEEEEEec
Q 045058 337 IKDKDLVKDDFVGIVRFDINEVPLRVPPDSPLAPEWYRLEDKKGE-KIKGELMLAVWIGT 395 (1005)
Q Consensus 337 V~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~-~~~G~i~l~~~~~~ 395 (1005)
++......-..||.+.|+|.++.... .....-.+|....+. ...|.|.+.+.+..
T Consensus 95 Lhqa~g~~~~tla~~~I~l~~lLe~~----~~i~g~~~L~g~~g~~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 95 VHQAYSTEYETIAACQLKFHEILEKS----GRIFCTASLIGTKGDIPNFGTVEYWFRLRV 150 (156)
T ss_dssp EEEECSSCEEEEEEEEECCSHHHHCC----SCEEEEEEECBSSSCCTTSEEEEEEEEEEE
T ss_pred EEEeeCCCceEEEEEEEEhHHhhCcC----CceEEEEEEEcCCCCcceEEEEEEEEEEec
Confidence 88875445679999999999998652 123334577776664 36799888877653
No 101
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=84.89 E-value=3 Score=51.07 Aligned_cols=72 Identities=13% Similarity=0.207 Sum_probs=51.8
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe----EeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEe
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYF--DGQ----RFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYN 76 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~--~~~----~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d 76 (1005)
...+.|+|.++.++... ...+-||.+.+ |++ ...|+.+.-..+|.|||.+.|++.-.+-.....|.|.||+
T Consensus 216 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 292 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYA 292 (940)
T ss_dssp CSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred CCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEE
Confidence 36799999999998753 34677877665 554 3455555557789999999999865444456789999998
Q ss_pred C
Q 045058 77 N 77 (1005)
Q Consensus 77 ~ 77 (1005)
.
T Consensus 293 ~ 293 (940)
T 2wxf_A 293 V 293 (940)
T ss_dssp E
T ss_pred e
Confidence 5
No 102
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=84.11 E-value=2.4 Score=39.50 Aligned_cols=124 Identities=10% Similarity=0.021 Sum_probs=81.9
Q ss_pred cEEEEEEEEeecCCCCC-C-CCCCCc--EEEEEECCe-EeeccccCCCCCCceeeEEEEEeccCcc----ccceEEEEEE
Q 045058 4 LKLGVQVVGAHNLLPKD-G-KGSSSA--FVELYFDGQ-RFRTTIKENDLNPVWNESFYFNISDASK----LHYLTLEAYI 74 (1005)
Q Consensus 4 ~~l~V~v~~a~~L~~~d-~-~g~~dp--yv~v~~~~~-~~~T~v~~~t~nP~Wne~f~f~v~~~~~----~~~~~l~v~V 74 (1005)
..+.|.|.++. +.+.- . .+..+| ||.+.+-.. .+.|.+.. +.+|.+|-+-.|.|.-.+. ++...|.+++
T Consensus 18 nlfEihi~~~~-~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~lEL 95 (156)
T 2yrb_A 18 NLFEIHINKVT-FSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITLEV 95 (156)
T ss_dssp EEEEEEEEEEC-CCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEEEE
T ss_pred cEEEEEEeEEE-EcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEEEE
Confidence 57888888887 32100 0 122456 455555454 56666664 8999999999998843222 3556788888
Q ss_pred EeCCCCCCCCcccEEEEEeCCcccCCCCceeeeEecccCCCcceeeeEEEEEEEEec
Q 045058 75 YNNIGDTNSRSFLGKVCLTGNSFVPLSDSVVLHYPLEKRGIFSHVRGELGLKVYITD 131 (1005)
Q Consensus 75 ~d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~~ 131 (1005)
... ....-+.||.+.|++.++...........+|....+....-|.|.+.+.+..
T Consensus 96 hqa--~g~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g~~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 96 HQA--YSTEYETIAACQLKFHEILEKSGRIFCTASLIGTKGDIPNFGTVEYWFRLRV 150 (156)
T ss_dssp EEE--CSSCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSSCCTTSEEEEEEEEEEE
T ss_pred EEe--eCCCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCCCcceEEEEEEEEEEec
Confidence 875 2335679999999999997665544344677765442235699998888766
No 103
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=81.54 E-value=6.4 Score=48.59 Aligned_cols=108 Identities=18% Similarity=0.168 Sum_probs=69.2
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe----EeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEe
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYF--DGQ----RFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYN 76 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~--~~~----~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d 76 (1005)
+..+.|+|+++.++.. +.....+-||.+.+ |++ ..+|+.+ ...+|.|||...|++.-.+-.....|-|.||+
T Consensus 354 ~~~f~v~i~~~~~~n~-~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~-~~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 354 NSALRIKILCATYVNV-NIRDIDKIYVRTGIYHGGEPLCDNVNTQRV-PCSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CSEEEEEEEEESCCCC-CCSSCCCCCEEEEEESSSCSSCCEECCCCC-CTTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCEEEEEEEecCCCC-CccccceEEEEEEEEECCEEccCceecccc-CCCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 3678999999998864 22334677888776 443 3445433 35678899999999865444556789999998
Q ss_pred CCCCCC---CCcccEEEEEeCCcccCCCCceeeeEecccCCCcceeeeEEEEEEEE
Q 045058 77 NIGDTN---SRSFLGKVCLTGNSFVPLSDSVVLHYPLEKRGIFSHVRGELGLKVYI 129 (1005)
Q Consensus 77 ~~~~~~---~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~ 129 (1005)
.....+ ....||-+.++|-+. .+. -.+|...+.++-
T Consensus 432 ~~~~~~~~~~~~~lg~~n~~lfd~----------------~~~-L~~G~~~L~lW~ 470 (1091)
T 3hhm_A 432 VKGRKGAKEEHCPLAWGNINLFDY----------------TDT-LVSGKMALNLWP 470 (1091)
T ss_dssp CCCCC-------CCEEEEEESBCT----------------TCB-BCCEEEEEECEE
T ss_pred ecCccCcccccceeEEeeeeeEcc----------------CCe-EEcCCeEEEeec
Confidence 633111 234677766664432 111 236899999873
No 104
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=76.98 E-value=19 Score=35.48 Aligned_cols=39 Identities=13% Similarity=0.333 Sum_probs=31.7
Q ss_pred eeeeeeecCCCCCeeeeEEEEee--cCCCCcEEEEEEEeCC
Q 045058 303 KGITKHYEKNQNPQWHQVFAFSR--DRMQASVLEVVIKDKD 341 (1005)
Q Consensus 303 ~~kT~~~~~~~nP~wne~f~f~~--~~~~~~~l~v~V~d~~ 341 (1005)
.++|.+...+.+|.|+|++.+.+ .......|.|+.++..
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S 118 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRS 118 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECC
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEec
Confidence 46788888899999999998875 4455678999998865
No 105
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=76.09 E-value=9.1 Score=46.91 Aligned_cols=86 Identities=17% Similarity=0.217 Sum_probs=58.6
Q ss_pred EEEEEEEEeeeCCCCCCCCCCCcEEEEEE--CCe----EEeeecccCCCCCcccccEEEEEee---CCCCCeEEEEEEec
Q 045058 435 YVRVNVVEAQDLVPTEKNHFPDVYVKAQI--GNQ----VLKTKICQARTLSAVWNEDLLFVAA---EPFEDHLVLTVEDR 505 (1005)
Q Consensus 435 ~L~V~v~~a~~L~~~d~~~~~dpyv~v~l--g~~----~~kT~~~~~~t~~P~w~e~f~f~v~---~~~~~~l~i~V~d~ 505 (1005)
.++|+|..+.++... ...+-||++.+ |++ ...|+.+. ...+|.|||.+.|++. -|.+..|.|+||+.
T Consensus 218 ~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~-~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 293 (940)
T 2wxf_A 218 PFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVN-VCSEPVWKQRLEFDISVCDLPRMARLCFALYAV 293 (940)
T ss_dssp EEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEE-SCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred ceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceeccccc-CCCCcccceEEEcccccccCCcccEEEEEEEEe
Confidence 799999999998654 34678888877 654 33444443 4678999999999874 35788999999996
Q ss_pred cCC--C----------CCceeEEEEEccccc
Q 045058 506 VGP--G----------KDEIIGRVIIPLSAI 524 (1005)
Q Consensus 506 d~~--~----------~d~~iG~~~i~l~~l 524 (1005)
... + ....+|.+.++|-+.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 324 (940)
T 2wxf_A 294 VEKAKKARSTKKKSKKADCPIAWANLMLFDY 324 (940)
T ss_dssp C----------------CEEEEEEEEESBCT
T ss_pred cCCccCccccccccccccceEEEEeeeEECC
Confidence 321 1 234777777776543
No 106
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=73.76 E-value=9.6 Score=46.77 Aligned_cols=74 Identities=23% Similarity=0.224 Sum_probs=49.5
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe---EeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEeC
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELYF--DGQ---RFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYNN 77 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~~--~~~---~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d~ 77 (1005)
+..+.|+|+++....... +..++-||.+.+ |++ ..+|+-+.-+.+|.|||.+.|++.-.+-.....|-|.||+.
T Consensus 217 ~~~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 295 (961)
T 1e7u_A 217 DRKFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCG 295 (961)
T ss_dssp CSEEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred cCceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEec
Confidence 357899999987522111 224567877654 554 24555554567899999999997654444567899999975
No 107
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=73.55 E-value=3.4 Score=51.22 Aligned_cols=72 Identities=15% Similarity=0.199 Sum_probs=52.7
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEE--ECCe----EeeccccCCCCCCceeeEEEEEeccCccccceEEEEEEEe
Q 045058 3 NLKLGVQVVGAHNLLPKDGKGSSSAFVELY--FDGQ----RFRTTIKENDLNPVWNESFYFNISDASKLHYLTLEAYIYN 76 (1005)
Q Consensus 3 ~~~l~V~v~~a~~L~~~d~~g~~dpyv~v~--~~~~----~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v~V~d 76 (1005)
+..+.|+|.++.++... ...+-||.+. .|++ ...|+.+.-..+|.|||.+.|++.-.+-.....|.|.||+
T Consensus 352 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~ 428 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYA 428 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCC
T ss_pred CCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEE
Confidence 36889999999998753 3466777654 4654 2445555557789999999999865554556789999998
Q ss_pred C
Q 045058 77 N 77 (1005)
Q Consensus 77 ~ 77 (1005)
.
T Consensus 429 ~ 429 (1092)
T 2y3a_A 429 V 429 (1092)
T ss_dssp C
T ss_pred e
Confidence 6
No 108
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=70.51 E-value=13 Score=45.96 Aligned_cols=87 Identities=20% Similarity=0.228 Sum_probs=59.9
Q ss_pred EEEEEEEEeeeCCCCCCCCCCCcEEEEEE--CCe----EEeeecccCCCCCcccccEEEEEee---CCCCCeEEEEEEec
Q 045058 435 YVRVNVVEAQDLVPTEKNHFPDVYVKAQI--GNQ----VLKTKICQARTLSAVWNEDLLFVAA---EPFEDHLVLTVEDR 505 (1005)
Q Consensus 435 ~L~V~v~~a~~L~~~d~~~~~dpyv~v~l--g~~----~~kT~~~~~~t~~P~w~e~f~f~v~---~~~~~~l~i~V~d~ 505 (1005)
.++|+|..+.++... .....+-||++.+ |++ ...|+.+ ...+|.|||.++|.+. -|.+..|.|+||+.
T Consensus 356 ~f~v~i~~~~~~n~~-~~~~~~~~V~~~l~hG~~~L~~~~~T~~~--~~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~ 432 (1091)
T 3hhm_A 356 ALRIKILCATYVNVN-IRDIDKIYVRTGIYHGGEPLCDNVNTQRV--PCSNPRWNEWLNYDIYIPDLPRAARLCLSICSV 432 (1091)
T ss_dssp EEEEEEEEESCCCCC-CSSCCCCCEEEEEESSSCSSCCEECCCCC--CTTSCEEEEEEEEEEEGGGCCTTCEEEEEECCC
T ss_pred CEEEEEEEecCCCCC-ccccceEEEEEEEEECCEEccCceecccc--CCCCCCCCeeEEecCccccCChhcEEEEEEEEe
Confidence 789999999887532 2334678999888 553 3344444 3457789999999874 35788999999986
Q ss_pred cCC----CCCceeEEEEEccccc
Q 045058 506 VGP----GKDEIIGRVIIPLSAI 524 (1005)
Q Consensus 506 d~~----~~d~~iG~~~i~l~~l 524 (1005)
... .....||.+.+.|-+.
T Consensus 433 ~~~~~~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 433 KGRKGAKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp CCCC-------CCEEEEEESBCT
T ss_pred cCccCcccccceeEEeeeeeEcc
Confidence 542 1345788888887654
No 109
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=62.41 E-value=26 Score=42.93 Aligned_cols=88 Identities=27% Similarity=0.244 Sum_probs=54.5
Q ss_pred EEEEEEEEeeeCCCCCCCCCCCcEEEEEE--CCeEE---eeecccCCCCCcccccEEEEEee---CCCCCeEEEEEEecc
Q 045058 435 YVRVNVVEAQDLVPTEKNHFPDVYVKAQI--GNQVL---KTKICQARTLSAVWNEDLLFVAA---EPFEDHLVLTVEDRV 506 (1005)
Q Consensus 435 ~L~V~v~~a~~L~~~d~~~~~dpyv~v~l--g~~~~---kT~~~~~~t~~P~w~e~f~f~v~---~~~~~~l~i~V~d~d 506 (1005)
.++|.|..+.... ...+...+-||++.+ |++.. +|..+. -+.++.|||.+.|.+. -|.+..|.++||+..
T Consensus 219 ~f~i~i~~~~~~~-~~~~~~~~~~V~~~l~~G~~~l~~~~t~~~~-~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 219 KFRVKIRGIDIPV-LPRTADLTVFVEANIQYGQQVLCQRRTSPKP-FTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp EEEEEEEEEECSS-CCTTSCEEEEEEEEEEETTEEEEEEECCCEE-CCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred ceEEEEeeccccc-ccCCCCceEEEEEEEEECCEEcccceeeccc-cCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 6788888775421 111234577888776 66432 343332 4567999999999764 357889999999864
Q ss_pred CCC----------------CCceeEEEEEccccc
Q 045058 507 GPG----------------KDEIIGRVIIPLSAI 524 (1005)
Q Consensus 507 ~~~----------------~d~~iG~~~i~l~~l 524 (1005)
..+ +...+|.+.+.|-+.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~ 330 (961)
T 1e7u_A 297 KPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDH 330 (961)
T ss_dssp C--------------------CEEEEEEEESBCT
T ss_pred cCccccccccccccccccccceeEEEEeeeeecC
Confidence 321 234677777666443
No 110
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=59.55 E-value=9.1 Score=47.54 Aligned_cols=92 Identities=14% Similarity=0.174 Sum_probs=59.6
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCCCCcEEEE--EECCEEE----EeeeccCCCCceeccEEEEEEe--C-C-CceEEEE
Q 045058 595 IGILELGILNAVGLHPMKTRDGRGTSDTYCVA--KYGHKWV----RTRTLVDNLSPKYNEQYTWEVF--D-P-ATVLTVG 664 (1005)
Q Consensus 595 ~g~l~v~i~~a~~L~~~~~~~~~~~~dpyv~~--~~g~~~~----~T~~~~~t~nP~wne~f~~~v~--~-~-~~~l~i~ 664 (1005)
...++|+|.++.++... ..++-||.+ ..|++.. .|+.+.-..+|.|||-++|++. + | .+.|.|+
T Consensus 352 ~~~f~i~i~~~~~~~~~------~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~t 425 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE------ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFA 425 (1092)
T ss_dssp CSEEEEEECCCCCCCCC------SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEE
T ss_pred CCCEEEEEEEeccCCCC------CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEE
Confidence 36899999999998742 345777764 4587653 4544444678999999999886 3 3 6799999
Q ss_pred EEeCCCcCCC----------------CCCCCCcccEEEEEEccc
Q 045058 665 VFDNSQLGEK----------------SNGNKDLKIGKVRIRIST 692 (1005)
Q Consensus 665 v~d~~~~~~~----------------~~~~~d~~lG~~~i~l~~ 692 (1005)
||+......+ +....+..||.+.++|-+
T Consensus 426 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd 469 (1092)
T 2y3a_A 426 VYAVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFD 469 (1092)
T ss_dssp CCCC------------------------------CCEEEEESBC
T ss_pred EEEecCccccccccccccccccccccccccccceeEEEeeeeEC
Confidence 9986421100 001124589999999866
No 111
>1p3q_Q VPS9P, vacuolar protein sorting-associated protein VPS9; trafficking, post translational modification, mono- ubiquitination; 1.70A {Saccharomyces cerevisiae} SCOP: a.5.2.4 PDB: 1mn3_A
Probab=40.75 E-value=16 Score=27.06 Aligned_cols=36 Identities=8% Similarity=0.111 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHhccCCCCChHHHHhhhccCCC
Q 045058 756 LDMLRHQAVNIVAARLGRAEPPLRKEVVEYMSDVDS 791 (1005)
Q Consensus 756 ~~~l~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~d~ 791 (1005)
.+.+++.-.+-+...|..++|.++++|++.++.+..
T Consensus 4 a~~i~~~e~~~~~~~L~~MFP~lD~evI~~Vl~a~~ 39 (54)
T 1p3q_Q 4 IKKIEENERKDTLNTLQNMFPDMDPSLIEDVCIAAA 39 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHcccCCHHHHHHHHHHcC
Confidence 345666666777788999999999999999997544
Done!