Query 045061
Match_columns 359
No_of_seqs 114 out of 1196
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 16:33:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045061.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045061hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 2.9E-59 9.8E-64 441.9 28.5 339 2-358 17-411 (413)
2 3psg_A Pepsinogen; hydrolase(a 100.0 7E-59 2.4E-63 434.0 24.9 298 3-352 54-370 (370)
3 1tzs_A Cathepsin E; hydrolase, 100.0 9E-58 3.1E-62 424.6 27.5 305 3-355 21-345 (351)
4 1mpp_A Pepsin; hydrolase(acid 100.0 1.5E-57 5.3E-62 424.9 28.3 306 3-357 16-360 (361)
5 3c9x_A Trichoderma reesei aspa 100.0 3.6E-58 1.2E-62 423.6 23.7 301 2-351 12-329 (329)
6 1j71_A Candidapepsin, aspartic 100.0 4.3E-58 1.5E-62 424.1 23.1 296 3-356 10-328 (334)
7 1oew_A Endothiapepsin; hydrola 100.0 1.1E-57 3.6E-62 420.5 23.7 300 2-351 12-329 (329)
8 2x0b_A Renin; hydrolase-hormon 100.0 3.7E-58 1.3E-62 429.9 20.8 301 3-352 59-383 (383)
9 2qzx_A Candidapepsin-5; aspart 100.0 1.8E-57 6.3E-62 421.4 24.7 300 3-356 10-335 (342)
10 1am5_A Pepsin, acid proteinase 100.0 2.4E-57 8.2E-62 417.5 25.1 296 3-352 10-324 (324)
11 2apr_A Rhizopuspepsin; hydrola 100.0 5.5E-57 1.9E-61 415.0 27.3 299 2-352 12-324 (325)
12 3cms_A Chymosin B; hydrolase, 100.0 1.3E-57 4.3E-62 419.1 22.9 297 3-352 12-323 (323)
13 3aup_A SBG7S, BG, basic 7S glo 100.0 1.1E-56 3.6E-61 424.8 29.7 331 3-357 19-398 (403)
14 4aa9_A Chymosin; hydrolase, as 100.0 6.5E-58 2.2E-62 420.8 20.7 297 3-352 9-320 (320)
15 1dpj_A Proteinase A; proteinas 100.0 2.6E-57 9.1E-62 418.1 24.6 301 3-352 11-329 (329)
16 1htr_B Gastricsin; aspartyl pr 100.0 4.7E-57 1.6E-61 416.5 24.4 300 3-352 10-329 (329)
17 3pvk_A Candidapepsin-2; hydrol 100.0 4E-57 1.4E-61 419.4 23.9 302 2-356 9-335 (342)
18 3fv3_A SAPP1P-secreted asparti 100.0 1.1E-56 3.8E-61 415.8 25.6 300 3-357 10-334 (339)
19 1miq_A Plasmepsin; aspartic pr 100.0 2.4E-56 8.2E-61 417.6 21.1 295 3-352 60-374 (375)
20 3k1w_A Renin; protease, altern 100.0 3.8E-56 1.3E-60 412.6 20.9 302 3-352 16-340 (341)
21 1ibq_A Aspergillopepsin; aspar 100.0 1.5E-55 5.3E-60 405.4 23.7 297 3-352 12-325 (325)
22 1izd_A Aspartic proteinase; su 100.0 2.3E-55 7.8E-60 403.8 21.9 295 3-352 13-323 (323)
23 1bxo_A Protein (penicillopepsi 100.0 2.3E-55 7.9E-60 403.9 20.4 295 3-352 13-323 (323)
24 2bju_A Plasmepsin II; aspartic 100.0 3.1E-55 1E-59 416.6 21.5 295 3-352 136-450 (453)
25 1yg9_A Aspartic protease BLA G 100.0 6.5E-55 2.2E-59 401.9 22.3 298 3-352 15-329 (330)
26 2ewy_A Beta-secretase 2; BACE2 100.0 1E-53 3.5E-58 402.3 29.1 319 3-355 11-358 (383)
27 3qvc_A Histo-aspartic protease 100.0 8E-55 2.7E-59 414.3 21.6 296 3-352 135-449 (451)
28 1qdm_A Prophytepsin; aspartic 100.0 1.7E-54 5.8E-59 415.7 23.3 311 3-352 50-478 (478)
29 2qp8_A Beta-secretase 1; BACE1 100.0 5.1E-53 1.7E-57 398.9 27.4 317 4-355 20-370 (395)
30 3vf3_A Beta-secretase 1; struc 100.0 9.9E-53 3.4E-57 397.9 28.7 318 4-356 27-378 (402)
31 1wkr_A Polyporopepsin; hydrola 100.0 8E-53 2.8E-57 389.9 25.7 294 4-357 11-338 (340)
32 3lpj_A Beta-secretase 1; alzhe 100.0 2.6E-52 8.8E-57 400.6 28.3 320 3-356 72-424 (455)
33 1t6e_X Xylanase inhibitor; two 100.0 2.9E-51 9.8E-56 384.8 24.8 320 2-353 11-374 (381)
34 1b5f_A Protein (cardosin A); h 100.0 1.5E-41 5.2E-46 298.3 18.2 220 3-255 11-238 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 1.6E-37 5.5E-42 273.5 18.7 220 108-352 2-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 2.7E-22 9.1E-27 149.4 8.9 82 3-104 11-96 (97)
37 1b5f_B Protein (cardosin A); h 99.7 6.5E-18 2.2E-22 123.5 6.7 79 270-352 2-87 (87)
38 3s8i_A Protein DDI1 homolog 1; 96.4 0.006 2.1E-07 48.2 6.1 103 229-359 37-142 (148)
39 2i1a_A DNA damage-inducible pr 95.2 0.046 1.6E-06 43.0 6.6 27 324-350 109-135 (148)
40 2hs1_A HIV-1 protease; ultra-h 86.5 0.98 3.3E-05 32.6 4.6 27 8-36 10-36 (99)
41 2i1a_A DNA damage-inducible pr 85.9 0.7 2.4E-05 36.0 3.9 30 4-35 24-53 (148)
42 1fmb_A EIAV protease; hydrolas 85.4 0.91 3.1E-05 33.1 4.0 25 8-34 10-34 (104)
43 3ec0_A Protease; HIV-2, inhibi 84.2 1.4 4.8E-05 31.7 4.5 28 8-37 10-37 (99)
44 3liy_A Protease; hydrolase, hy 81.9 1.2 4E-05 32.9 3.3 31 8-38 12-45 (116)
45 3s8i_A Protein DDI1 homolog 1; 77.9 1.9 6.6E-05 33.6 3.7 31 4-36 22-52 (148)
46 2hah_A Protease, retropepsin; 77.1 2.4 8.2E-05 31.5 3.8 25 8-35 16-40 (116)
47 3sqf_A Protease; folded monome 73.4 3.9 0.00013 30.2 4.0 29 8-38 11-39 (114)
48 3slz_A GAG-Pro-POL polyprotein 71.4 5.4 0.00019 30.3 4.6 29 6-36 22-50 (132)
49 2rsp_A RSV protease; hydrolase 60.7 9.3 0.00032 28.6 3.9 24 13-38 27-50 (124)
50 3ka2_A [L-Ala51;Gly51']HIV-1 p 60.2 8.2 0.00028 31.6 3.9 27 7-35 9-35 (203)
51 1lya_A Cathepsin D; lysosomal 59.7 7.9 0.00027 27.5 3.4 18 229-246 29-46 (97)
52 3ka2_A [L-Ala51;Gly51']HIV-1 p 39.4 36 0.0012 27.8 4.6 26 8-35 114-139 (203)
53 3cms_A Chymosin B; hydrolase, 34.5 33 0.0011 30.0 4.0 18 229-246 30-47 (323)
54 1mpp_A Pepsin; hydrolase(acid 32.5 42 0.0014 29.9 4.4 46 184-245 5-50 (361)
55 3c9x_A Trichoderma reesei aspa 30.7 40 0.0014 29.6 3.9 33 4-36 192-230 (329)
56 3vla_A EDGP; extracellular, in 29.0 57 0.002 29.8 4.7 45 184-244 6-51 (413)
57 1b5f_A Protein (cardosin A); h 28.4 39 0.0013 28.2 3.2 18 229-246 29-46 (239)
58 1bxo_A Protein (penicillopepsi 27.6 53 0.0018 28.7 4.1 19 229-247 29-47 (323)
59 1lya_B Cathepsin D; lysosomal 27.6 54 0.0018 27.1 4.0 27 10-36 107-137 (241)
60 1izd_A Aspartic proteinase; su 26.5 57 0.0019 28.5 4.1 19 229-247 29-47 (323)
61 1ibq_A Aspergillopepsin; aspar 25.3 52 0.0018 28.8 3.6 19 229-247 28-46 (325)
62 2xk0_A Polycomb protein PCL; t 23.9 79 0.0027 20.7 3.2 32 2-35 27-58 (69)
63 1am5_A Pepsin, acid proteinase 23.6 61 0.0021 28.3 3.7 18 229-246 28-45 (324)
64 1yg9_A Aspartic protease BLA G 22.9 58 0.002 28.6 3.4 17 229-245 31-47 (330)
65 3k1w_A Renin; protease, altern 22.1 76 0.0026 27.8 4.1 18 229-246 34-51 (341)
66 1j71_A Candidapepsin, aspartic 21.9 62 0.0021 28.4 3.5 16 229-244 28-43 (334)
67 3fv3_A SAPP1P-secreted asparti 21.7 63 0.0022 28.3 3.5 16 229-244 28-43 (339)
68 2apr_A Rhizopuspepsin; hydrola 21.0 73 0.0025 27.8 3.7 17 229-245 31-47 (325)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=2.9e-59 Score=441.94 Aligned_cols=339 Identities=20% Similarity=0.383 Sum_probs=280.0
Q ss_pred CCcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCceeecCCCCCCCCC-----------
Q 045061 2 EKNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCVNCFNQSAPIFNPNASSTYKRIPCDDLICRRP----------- 70 (359)
Q Consensus 2 ~~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~~----------- 70 (359)
.++++|+++|.||||||++.|+|||||+++||+|..| .+|+||+.+.|.+..|...
T Consensus 17 ~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c-------------~~Sst~~~v~C~s~~C~~~~~~~~~~c~s~ 83 (413)
T 3vla_A 17 ASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN-------------YVSSTYRPVRCRTSQCSLSGSIACGDCFNG 83 (413)
T ss_dssp TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS-------------CCCTTCEECBTTSHHHHHTTCCEEECCSSC
T ss_pred CCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC-------------CCCCCcCccCCCcccccccccCCCcccccC
Confidence 4688999999999999999999999999999998765 3799999999999888762
Q ss_pred -CCCCCCCCceEEEEe-CCCCeEEEEEEEEEEEEecCCc-----eeecCceEEEceeCCCCCCCCCCcceEEecCCCCCc
Q 045061 71 -PFRCENGQCVHRINY-AGGASASGLVSTETFTFHLKNK-----LVCVPGVIFGCSNDNRDFSFDGNIAGILGFSVSPFS 143 (359)
Q Consensus 71 -~~~c~~~~~~~~~~y-~~g~~~~G~~~~D~v~i~~~~~-----~~~~~~~~fg~~~~~~~~~~~~~~~GilGLg~~~~s 143 (359)
...|.++.|.|.+.| .+++.+.|.+++|+|+|+..++ .+.++++.|||++.+.........+||||||++..|
T Consensus 84 ~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~~dGIlGLg~~~lS 163 (413)
T 3vla_A 84 PRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRIA 163 (413)
T ss_dssp CBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTTCCEEEECSSSSSS
T ss_pred CCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcccccccccccCCCCcc
Confidence 135667789999999 5887799999999999984321 368889999999986320224578999999999999
Q ss_pred hHHhhhhc--CCCceEEeccccCCCCCcceeEEECCCCcc------CCCC-ceeeeeecCC------------CCcEEEE
Q 045061 144 LLGQLKST--AQGLFSYCLVYAYREMEATSILRFGKDANI------QRKD-MKTIRMFVDR------------SSHYYLS 202 (359)
Q Consensus 144 ~~~ql~~~--~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~~------~~~~-i~~~~~~~~~------------~~~w~v~ 202 (359)
++.||.+. .+++||+||.+.. ...|.|+||+.|.. +.++ +.|+|++..+ ..+|.|.
T Consensus 164 l~sql~~~~~i~~~FS~cL~~~~---~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~y~V~ 240 (413)
T 3vla_A 164 LPSQFASAFSFKRKFAMCLSGST---SSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIG 240 (413)
T ss_dssp HHHHHHHHHTCCSEEEEECCSCS---SSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCSCEEC
T ss_pred hHHHHhhhcCCCceEEEeCCCCC---CCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCceEEEE
Confidence 99998764 3699999999843 56799999999853 4667 9999999853 1699999
Q ss_pred EeEEEECCEEeecCCCccccccCCCCcEEEecCCcccccCchHHHHHHHHHHHHhhccCccccCCCccccccceecccCc
Q 045061 203 LQDISVADHRIGFAPGTFALRRNGTGGCMIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNASEDWEYCYRYDSRF 282 (359)
Q Consensus 203 l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~ 282 (359)
+++|+|+++.+.++++.+.++..+.+.+||||||++++||+++|++|++++.+......+.... ....+..|+..+...
T Consensus 241 l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~-~~~~~~~C~~~~~~~ 319 (413)
T 3vla_A 241 VKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVA-SVAPFGACFSTDNIL 319 (413)
T ss_dssp CCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEEC-CCTTCSCEEECTTCC
T ss_pred EEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCC-CCCCCcceeccCCcc
Confidence 9999999999988877777666666789999999999999999999999999886421111221 233568999875331
Q ss_pred -----cccceEEEEEcC--cEEEEcCCceEEEEcCCCeEEEEEEcCC----CceeecccceeeeEEEEECCCCEEEEee-
Q 045061 283 -----RAYASMTFHFDR--ADFKVEPTYMYFIFQNEGYFCVAISFSD----RNSVVGAWQQQDTRFVYDLNTGTIQFVP- 350 (359)
Q Consensus 283 -----~~~p~l~~~f~g--~~~~i~~~~y~~~~~~~~~~C~~~~~~~----~~~iLG~~fl~~~y~vfD~~~~~igfa~- 350 (359)
..+|+|+|+|+| +.++|++++|+++.. ++..|++++..+ +.||||+.|||++|+|||++++|||||+
T Consensus 320 ~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~-~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~~~~riGfa~~ 398 (413)
T 3vla_A 320 STRLGPSVPSIDLVLQSESVVWTITGSNSMVYIN-DNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFSGT 398 (413)
T ss_dssp EETTEECCCCEEEECSSTTCEEEECHHHHEEEEE-TTEEEECEEEEESSCSSSEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred ccccccCCCcEEEEEcCCcEEEEeCccceEEEeC-CCcEEEEEEecCCCcccceeEehhhhcCeEEEEECCCCEEEEEEe
Confidence 479999999998 899999999999865 568999887543 4799999999999999999999999998
Q ss_pred -----CCCCCccC
Q 045061 351 -----ENCANDHF 358 (359)
Q Consensus 351 -----~~c~~~~~ 358 (359)
+.|.+..|
T Consensus 399 ~~~~~~~c~~~~~ 411 (413)
T 3vla_A 399 LLGSRTTCANFNF 411 (413)
T ss_dssp GGGGTCCGGGSBC
T ss_pred cccCcccccCcCC
Confidence 56877665
No 2
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=7e-59 Score=434.03 Aligned_cols=298 Identities=20% Similarity=0.306 Sum_probs=254.0
Q ss_pred CcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCCceEE
Q 045061 3 KNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCVNCFNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQCVHR 82 (359)
Q Consensus 3 ~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~~~~~ 82 (359)
.|.+|+++|.||||||+|.|++||||+++||++..|..|.|..++.|+|++|+||+..+ +.|.
T Consensus 54 ~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C~~~~~y~~~~SsT~~~~~-----------------~~~~ 116 (370)
T 3psg_A 54 LDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEATS-----------------QELS 116 (370)
T ss_dssp TTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEE-----------------EEEE
T ss_pred cCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcccCCCCCCCCccCcCcEECC-----------------cEEE
Confidence 37899999999999999999999999999999999998888899999999999999988 7999
Q ss_pred EEeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeCCCCCCCC--CCcceEEecCCCCCc------hHHhhhh---c
Q 045061 83 INYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSNDNRDFSFD--GNIAGILGFSVSPFS------LLGQLKS---T 151 (359)
Q Consensus 83 ~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~GilGLg~~~~s------~~~ql~~---~ 151 (359)
+.|++|+ +.|.+++|+|+|+ ++.++++.||+++...+ ..+ ..++||||||++..+ ++.+|.+ +
T Consensus 117 i~Yg~Gs-~~G~~~~Dtv~ig----~~~v~~~~Fg~a~~~~~-~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i 190 (370)
T 3psg_A 117 ITYGTGS-MTGILGYDTVQVG----GISDTNQIFGLSETEPG-SFLYYAPFDGILGLAYPSISASGATPVFDNLWDQGLV 190 (370)
T ss_dssp EESSSCE-EEEEEEEEEEEET----TEEEEEEEEEEECSCCC-GGGGGCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCS
T ss_pred EEeCCce-EEEEEEEEEEeeC----CcccCCeEEEEEEeecc-cccccCCccceeccCCccccccCCCCHHHHHHHCCCC
Confidence 9999998 9999999999999 48899999999998865 322 378999999998654 4555544 3
Q ss_pred CCCceEEeccccCCCCCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCccccccCCCCcE
Q 045061 152 AQGLFSYCLVYAYREMEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFALRRNGTGGC 230 (359)
Q Consensus 152 ~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~ 230 (359)
.+++||+||.+.. ...|.|+|||+|. .+.+++.|+|+.. ..+|.|.+++|+|+++.+.... ...+
T Consensus 191 ~~~~FS~~L~~~~---~~~G~l~fGg~D~~~y~g~l~~~pv~~--~~~w~v~l~~i~v~g~~~~~~~---------~~~a 256 (370)
T 3psg_A 191 SQDLFSVYLSSND---DSGSVVLLGGIDSSYYTGSLNWVPVSV--EGYWQITLDSITMDGETIACSG---------GCQA 256 (370)
T ss_dssp SSSEEEEEEC--------CEEEEETCCCGGGBSSCCEEEECSE--ETTEEEEECEEESSSSEEECTT---------CEEE
T ss_pred CCCEEEEEEccCC---CCCeEEEEEeeChHhcCCcceeecccc--cceeEEEEeEEEECCEEEecCC---------CceE
Confidence 5799999999853 5689999999995 5899999999998 7899999999999998765322 2479
Q ss_pred EEecCCcccccCchHHHHHHHHHHHHhhccCccccCCCccccccceecccCccccceEEEEEcCcEEEEcCCceEEEEcC
Q 045061 231 MIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNASEDWEYCYRYDSRFRAYASMTFHFDRADFKVEPTYMYFIFQN 310 (359)
Q Consensus 231 iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~l~~~f~g~~~~i~~~~y~~~~~~ 310 (359)
|+||||+++++|++++++|.+++++.. .....+.++|+... .+|+|+|.|+|+.++|++++|++. .
T Consensus 257 iiDTGTs~~~lP~~~~~~i~~~i~a~~--------~~~g~~~v~C~~~~----~lP~i~f~~~g~~~~l~~~~yi~~-~- 322 (370)
T 3psg_A 257 IVDTGTSLLTGPTSAIANIQSDIGASE--------NSDGEMVISCSSID----SLPDIVFTIDGVQYPLSPSAYILQ-D- 322 (370)
T ss_dssp EECTTCCSEEEEHHHHHHHHHHTTCEE--------CTTCCEECCGGGGG----GCCCEEEEETTEEEEECHHHHEEE-C-
T ss_pred EEcCCCCcEECCHHHHHHHHHHhCCcc--------cCCCcEEEECCCcc----cCCcEEEEECCEEEEECHHHhccc-C-
Confidence 999999999999999999999986542 12345779999876 899999999999999999999998 2
Q ss_pred CCeEEEE-EEcC-----CC-ceeecccceeeeEEEEECCCCEEEEeeCC
Q 045061 311 EGYFCVA-ISFS-----DR-NSVVGAWQQQDTRFVYDLNTGTIQFVPEN 352 (359)
Q Consensus 311 ~~~~C~~-~~~~-----~~-~~iLG~~fl~~~y~vfD~~~~~igfa~~~ 352 (359)
+ ..|+. +... .+ .||||.+|||++|+|||++++|||||+++
T Consensus 323 ~-~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 323 D-DSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp S-SCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred C-CEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 3 46974 5432 23 59999999999999999999999999974
No 3
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=9e-58 Score=424.61 Aligned_cols=305 Identities=18% Similarity=0.254 Sum_probs=253.5
Q ss_pred CcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCCceEE
Q 045061 3 KNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCVNCFNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQCVHR 82 (359)
Q Consensus 3 ~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~~~~~ 82 (359)
.+++|+++|.||||||++.|+|||||+++||++..|..+.|..++.|+|++|+||+... |.|.
T Consensus 21 ~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~-----------------~~~~ 83 (351)
T 1tzs_A 21 LDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTHSRFQPSQSSTYSQPG-----------------QSFS 83 (351)
T ss_dssp SSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCBCCS-----------------CEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCCCCcCCcccCcceEECC-----------------CEEE
Confidence 46899999999999999999999999999999999974444678999999999999877 7999
Q ss_pred EEeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeCCCCCCCC--CCcceEEecCCCCCc------hHHhhhhc---
Q 045061 83 INYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSNDNRDFSFD--GNIAGILGFSVSPFS------LLGQLKST--- 151 (359)
Q Consensus 83 ~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~GilGLg~~~~s------~~~ql~~~--- 151 (359)
+.|++|+ +.|.+++|+|+|+ ++.++++.||+++...+ ..+ ...+||||||++..+ ++.+|.+.
T Consensus 84 i~Yg~Gs-~~G~~~~D~v~ig----~~~~~~~~fg~~~~~~~-~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i 157 (351)
T 1tzs_A 84 IQYGTGS-LSGIIGADQVSVE----GLTVVGQQFGESVTEPG-QTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLV 157 (351)
T ss_dssp EESSSCE-EEEEEEEEEEEET----TEEEEEEEEEEECSCCC-GGGGGCSCSEEEECSCGGGSGGGCCCHHHHHHHTTCC
T ss_pred EEeCCCC-eEEEEEEeEEEEC----CeEECCeEEEEEEeccc-cccccCCCceEEecCCccccccCCCcHHHHHHHCCCC
Confidence 9999998 8999999999998 47889999999998765 322 378999999998654 45565543
Q ss_pred CCCceEEeccccCCCCCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCccccccCCCCcE
Q 045061 152 AQGLFSYCLVYAYREMEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFALRRNGTGGC 230 (359)
Q Consensus 152 ~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~ 230 (359)
.+++||+||.+... ....|.|+|||+|. .+.+++.|+|+.. ..+|.|.+++|+|+++.+.... ...+
T Consensus 158 ~~~~FS~~L~~~~~-~~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~~~v~l~~i~v~~~~~~~~~---------~~~a 225 (351)
T 1tzs_A 158 DLPMFSVYMSSNPE-GGAGSELIFGGYDHSHFSGSLNWVPVTK--QAYWQIALDNIQVGGTVMFCSE---------GCQA 225 (351)
T ss_dssp SSSEEEEECCCCC---CTTCEEEETSCCGGGBCSCCEEEECSE--ETTEEEEEEEEEETTEEEECTT---------CEEE
T ss_pred CCCEEEEEEcCCCC-CCCCCEEEECCCCHHHcCCceEEEecCC--CceEEEEeCEEEECCceEEcCC---------CceE
Confidence 57999999988531 12379999999995 5889999999998 7899999999999998753221 2479
Q ss_pred EEecCCcccccCchHHHHHHHHHHHHhhccCccccCCCccccccceecccCccccceEEEEEcCcEEEEcCCceEEEEcC
Q 045061 231 MIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNASEDWEYCYRYDSRFRAYASMTFHFDRADFKVEPTYMYFIFQN 310 (359)
Q Consensus 231 iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~l~~~f~g~~~~i~~~~y~~~~~~ 310 (359)
||||||++++||++++++|.+++.+.. .. ..+.++|+..+ .+|+|+|.|+|+.++|++++|++....
T Consensus 226 iiDSGTs~~~lP~~~~~~l~~~~~~~~-------~~--g~~~~~C~~~~----~~P~i~f~f~g~~~~i~~~~yi~~~~~ 292 (351)
T 1tzs_A 226 IVDTGTSLITGPSDKIKQLQNAIGAAP-------VD--GEYAVECANLN----VMPDVTFTINGVPYTLSPTAYTLLDFV 292 (351)
T ss_dssp EECTTCSSEEECHHHHHHHHHHHTCEE-------CS--SSEEECGGGGG----GSCCEEEEETTEEEEECTTTSEECC--
T ss_pred EeccCCcceeCCHHHHHHHHHHhCCcc-------cC--CeEEEeCCCCc----cCCcEEEEECCEEEEECHHHhEeeccC
Confidence 999999999999999999999985431 11 45678999865 899999999999999999999987542
Q ss_pred C-CeEEE-EEEcC------CCceeecccceeeeEEEEECCCCEEEEeeCCCCC
Q 045061 311 E-GYFCV-AISFS------DRNSVVGAWQQQDTRFVYDLNTGTIQFVPENCAN 355 (359)
Q Consensus 311 ~-~~~C~-~~~~~------~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~c~~ 355 (359)
. +..|+ +|... .+.||||.+|||++|+|||++++|||||+++|..
T Consensus 293 ~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~s 345 (351)
T 1tzs_A 293 DGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPWS 345 (351)
T ss_dssp ---CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC---
T ss_pred CCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCccc
Confidence 2 36898 46543 3589999999999999999999999999999865
No 4
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=1.5e-57 Score=424.91 Aligned_cols=306 Identities=20% Similarity=0.278 Sum_probs=257.8
Q ss_pred CcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCC---CCCCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCCc
Q 045061 3 KNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCV---NCFNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQC 79 (359)
Q Consensus 3 ~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~---~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~~ 79 (359)
.++.|+++|.||||||++.|+|||||+++||+|..|. .| ..++.|+|++|+||+..+ |
T Consensus 16 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C--~~~~~y~~~~SsT~~~~~-----------------~ 76 (361)
T 1mpp_A 16 DLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGC--VGKRFFDPSSSSTFKETD-----------------Y 76 (361)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTC--CSSCCBCGGGCTTCEEEE-----------------E
T ss_pred CCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccC--CCCCcCCCccCCceEecC-----------------C
Confidence 4789999999999999999999999999999999998 56 567899999999999988 7
Q ss_pred eEEEEeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeCCCC-----CCC-CCCcceEEecCCCCCc----------
Q 045061 80 VHRINYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSNDNRD-----FSF-DGNIAGILGFSVSPFS---------- 143 (359)
Q Consensus 80 ~~~~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~~~~-----~~~-~~~~~GilGLg~~~~s---------- 143 (359)
.|.+.|++|+ +.|.+++|+|+|+ ++.++++.||+++...+ ..+ ....+||||||++..+
T Consensus 77 ~~~i~Yg~Gs-~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~ 151 (361)
T 1mpp_A 77 NLNITYGTGG-ANGIYFRDSITVG----GATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDTY 151 (361)
T ss_dssp EEEEECSSCE-EEEEEEEEEEEET----TEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCCC
T ss_pred eEEEEECCce-EEEEEEEEEEEEC----CEEEeceEEEEEEeccCccccccccccCCCCCEEEeCCcccccccccccccC
Confidence 9999999998 8999999999999 47899999999998643 122 2478999999997554
Q ss_pred --hHHhhhhc---CCCceEEeccccCCCCCcceeEEECCCCc-cCCCCceeeeeecCCCC---cEEEEEeEEEECCEEee
Q 045061 144 --LLGQLKST---AQGLFSYCLVYAYREMEATSILRFGKDAN-IQRKDMKTIRMFVDRSS---HYYLSLQDISVADHRIG 214 (359)
Q Consensus 144 --~~~ql~~~---~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~---~w~v~l~~i~v~~~~~~ 214 (359)
++.+|.+. .+++||+||.+. ...|.|+|||+|. ++.+++.|+|+... .. +|.|.+++|+|+++.+.
T Consensus 152 ~~~~~~l~~~g~i~~~~FS~~l~~~----~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~~~~~v~l~~i~v~~~~~~ 226 (361)
T 1mpp_A 152 NTVHVNLYKQGLISSPVFSVYMNTN----DGGGQVVFGGVNNTLLGGDIQYTDVLKS-RGGYFFWDAPVTGVKIDGSDAV 226 (361)
T ss_dssp CCHHHHHHHTTSSSSSEEEEECCCS----SSEEEEEESSCCGGGBSSCCEEEECEEE-TTEEEEEEEEEEEEEETTEEEE
T ss_pred CCHHHHHHHcCCCCCcEEEEEecCC----CCCcEEEEecCChhhcCCceEEEEcccC-CCceeEEEEEEeEEEECCeeec
Confidence 44455543 579999999983 4579999999994 58899999999984 22 99999999999998764
Q ss_pred cCCCccccccCCCCcEE-EecCCcccccCchHHHHHHHHHHHHhhccCccccCCCccccccceecccCcccc-ceEEEEE
Q 045061 215 FAPGTFALRRNGTGGCM-IDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNASEDWEYCYRYDSRFRAY-ASMTFHF 292 (359)
Q Consensus 215 ~~~~~~~~~~~~~~~~i-iDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~-p~l~~~f 292 (359)
.... ..+| |||||++++||++++++|.+++.+.... ....+.++|+... .+ |+|+|.|
T Consensus 227 ~~~~---------~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~~-------~~g~~~~~C~~~~----~~~p~i~f~f 286 (361)
T 1mpp_A 227 SFDG---------AQAFTIDTGTNFFIAPSSFAEKVVKAALPDATE-------SQQGYTVPCSKYQ----DSKTTFSLVL 286 (361)
T ss_dssp EEEE---------EEEEEEETTCCSEEEEHHHHHHHHHHHCTTCEE-------ETTEEEEEHHHHT----TCCCEEEEEE
T ss_pred cCCC---------CEEEEECCCCCceeCCHHHHHHHHHHhCCcccC-------CCCcEEEECCCcc----cCCCcEEEEE
Confidence 2211 3699 9999999999999999999998664321 1244678999765 77 9999999
Q ss_pred --c-----CcEEEEcCCceEEEEcCCCeEEE-EEEc-CCCceeecccceeeeEEEEECCCCEEEEeeCCCCCcc
Q 045061 293 --D-----RADFKVEPTYMYFIFQNEGYFCV-AISF-SDRNSVVGAWQQQDTRFVYDLNTGTIQFVPENCANDH 357 (359)
Q Consensus 293 --~-----g~~~~i~~~~y~~~~~~~~~~C~-~~~~-~~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~c~~~~ 357 (359)
+ |+.++|++++|++....++..|+ +|.. ..+.||||.+|||++|+|||++++|||||+++|+.+.
T Consensus 287 ~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~~~~ 360 (361)
T 1mpp_A 287 QKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDGGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGYEN 360 (361)
T ss_dssp ECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEESSSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTTCC
T ss_pred EcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeCCCCCEEEChHHhccEEEEEECCCCEEEEEEcccCCCC
Confidence 7 79999999999998653456897 6665 3468999999999999999999999999999998763
No 5
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=3.6e-58 Score=423.61 Aligned_cols=301 Identities=18% Similarity=0.235 Sum_probs=254.4
Q ss_pred CCcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCCceE
Q 045061 2 EKNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCVNCFNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQCVH 81 (359)
Q Consensus 2 ~~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~~~~ 81 (359)
..++.|+++|.||||||++.|+|||||+++||+|..|..|.++.++.|+|++|+|++.+++ |.|
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~~~~~y~~~~SsT~~~~~~----------------~~~ 75 (329)
T 3c9x_A 12 SADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSATGHAIYTPSKSSTSKKVSG----------------ASW 75 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCGGGCTTCEECTT----------------CBE
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccCCCCcCCcccCcCceEcCC----------------CeE
Confidence 4678999999999999999999999999999999999999888899999999999999755 799
Q ss_pred EEEeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeCCCCCCCC--CCcceEEecCCCCCc---------hHHhhhh
Q 045061 82 RINYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSNDNRDFSFD--GNIAGILGFSVSPFS---------LLGQLKS 150 (359)
Q Consensus 82 ~~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~GilGLg~~~~s---------~~~ql~~ 150 (359)
.+.|++|+.+.|.+++|+|+|+ ++.++++.||+++.... .+. ...+||||||++..+ ++.+|.+
T Consensus 76 ~i~Yg~Gs~~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~~-~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~ 150 (329)
T 3c9x_A 76 SISYGDGSSSSGDVYTDKVTIG----GFSVNTQGVESATRVST-EFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAAS 150 (329)
T ss_dssp EEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECH-HHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHHT
T ss_pred EEEeCCCCcEEEEEEEEEEEEC----CEEEcceEEEEEEecCc-cccccCCCceeEEeCcccccccCCCCCCCHHHHHHH
Confidence 9999999889999999999998 47899999999998765 332 478999999997544 4555554
Q ss_pred c-CCCceEEeccccCCCCCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCccccccCCCC
Q 045061 151 T-AQGLFSYCLVYAYREMEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFALRRNGTG 228 (359)
Q Consensus 151 ~-~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~ 228 (359)
. .+++||+||.+ ...|.|+|||+|. ++.+++.|+|+... ..+|.|.+++|+|+++.+. .. ..
T Consensus 151 ~i~~~~FS~~l~~-----~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~~v~l~~i~v~~~~~~--~~--------~~ 214 (329)
T 3c9x_A 151 SLAEPLFTADLRH-----GQNGSYNFGYIDTSVAKGPVAYTPVDNS-QGFWEFTASGYSVGGGKLN--RN--------SI 214 (329)
T ss_dssp TSSSSEEEEECCS-----SSCEEEEESSCCGGGCSSCEEEEECBCT-TSSCEEEECCEEETTCCCC--SC--------CE
T ss_pred hcCCCEEEEEecC-----CCCcEEEEeCcChhhcccceEEEEccCC-CceEEEEEeeEEECCEecc--CC--------Cc
Confidence 3 57899999986 3579999999994 68899999999853 6799999999999987653 11 24
Q ss_pred cEEEecCCcccccCchHHHHHHHHHHHHhhccCccccCCCccccccceecccCccccceEEEEEcCcEEEEcCCceEEEE
Q 045061 229 GCMIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNASEDWEYCYRYDSRFRAYASMTFHFDRADFKVEPTYMYFIF 308 (359)
Q Consensus 229 ~~iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~l~~~f~g~~~~i~~~~y~~~~ 308 (359)
.+||||||++++||++++++|.+++.+... ......+.++|+. .+|+|+|.|+|+.++||+++|++..
T Consensus 215 ~aiiDSGTt~~~lp~~~~~~i~~~i~~a~~------~~~~~~~~~~C~~------~~P~i~f~f~g~~~~ip~~~~~~~~ 282 (329)
T 3c9x_A 215 DGIADTGTTLLLLDDNVVDAYYANVQSAQY------DNQQEGVVFDCDE------DLPSFSFGVGSSTITIPGDLLNLTP 282 (329)
T ss_dssp EEEECTTCCSEEECHHHHHHHHTTCTTCEE------ETTTTEEEEETTC------CCCCEEEEETTEEEEECGGGGEEEE
T ss_pred eEEEECCCCcEeCCHHHHHHHHHhCCCcEE------cCCCCEEEEECCC------CCCcEEEEECCEEEEECHHHeeeec
Confidence 799999999999999999999988743211 1112446689984 7999999999999999999999876
Q ss_pred cCC-CeEEEE-EEcCC--CceeecccceeeeEEEEECCCCEEEEeeC
Q 045061 309 QNE-GYFCVA-ISFSD--RNSVVGAWQQQDTRFVYDLNTGTIQFVPE 351 (359)
Q Consensus 309 ~~~-~~~C~~-~~~~~--~~~iLG~~fl~~~y~vfD~~~~~igfa~~ 351 (359)
..+ ...|++ +...+ +.||||.+|||++|+|||++++|||||++
T Consensus 283 ~~~~~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 283 LEEGSSTCFGGLQSSSGIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp SSTTCSEEEESEEECTTTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred cCCCCCeEEEEEEcCCCCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 432 479986 55443 68999999999999999999999999974
No 6
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=4.3e-58 Score=424.07 Aligned_cols=296 Identities=17% Similarity=0.264 Sum_probs=253.1
Q ss_pred CcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCC--CCCCC-------CCCCCCCCCCCCCCCceeecCCCCCCCCCCCC
Q 045061 3 KNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCL--PCVNC-------FNQSAPIFNPNASSTYKRIPCDDLICRRPPFR 73 (359)
Q Consensus 3 ~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~--~c~~c-------~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~ 73 (359)
.++.|+++|.||||||++.|+|||||+++||++. .|..| .|..++.|+|++|+|++..+
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~------------ 77 (334)
T 1j71_A 10 EGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLN------------ 77 (334)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEE------------
T ss_pred CCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCC------------
Confidence 4689999999999999999999999999999875 67654 34678899999999999988
Q ss_pred CCCCCceEEEEeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeCCCCCCCCCCcceEEecCCCCC--------chH
Q 045061 74 CENGQCVHRINYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSNDNRDFSFDGNIAGILGFSVSPF--------SLL 145 (359)
Q Consensus 74 c~~~~~~~~~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~GilGLg~~~~--------s~~ 145 (359)
|.|.+.|++|+.+.|.+++|+|+|+ ++.++++.||+++.... .+||||||++.. +++
T Consensus 78 -----~~~~i~Yg~Gs~~~G~~~~D~v~~g----~~~~~~~~fg~~~~~~~------~~GilGLg~~~~~~~~~~~~~~~ 142 (334)
T 1j71_A 78 -----QDFSIEYGDLTSSQGSFYKDTVGFG----GISIKNQQFADVTTTSV------DQGIMGIGFTADEAGYNLYDNVP 142 (334)
T ss_dssp -----EEEEEEBTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEESS------SSCEEECSCGGGSSTTCCCCCHH
T ss_pred -----CceEEEECCCCEEEEEEEEEEEEEC----CEEEccEEEEEEEecCC------CccEEEEcCCcccCccccCCcHH
Confidence 7999999999878999999999999 47889999999997643 689999999754 677
Q ss_pred Hhhhhc---CCCceEEeccccCCCCCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCccc
Q 045061 146 GQLKST---AQGLFSYCLVYAYREMEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFA 221 (359)
Q Consensus 146 ~ql~~~---~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~ 221 (359)
.||.+. .+++||+||.+.. ...|.|+|||+|. ++.+++.|+|+.. ..+|.|.+++|+|+++.+...
T Consensus 143 ~~L~~qg~i~~~~Fs~~l~~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~~~v~l~~i~v~g~~~~~~----- 212 (334)
T 1j71_A 143 VTLKKQGIINKNAYSLYLNSED---ASTGKIIFGGVDNAKYTGTLTALPVTS--SVELRVHLGSINFDGTSVSTN----- 212 (334)
T ss_dssp HHHHHTTSCSSSEEEEECCCTT---CSEEEEEETEEETTSEEEEEEEEECCC--SSSCEEEEEEEEETTEEEEEE-----
T ss_pred HHHHHCCCCCccEEEEEeCCCC---CCCeEEEEeeechHHccCceEEEEccC--CCeEEEEEeEEEECCEeccCC-----
Confidence 777654 4789999998753 5689999999994 5889999999998 679999999999999877532
Q ss_pred cccCCCCcEEEecCCcccccCchHHHHHHHHHHHHhhccCccccCCCcccc-ccceecccCccccceEEEEE-cCcEEEE
Q 045061 222 LRRNGTGGCMIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNASEDW-EYCYRYDSRFRAYASMTFHF-DRADFKV 299 (359)
Q Consensus 222 ~~~~~~~~~iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~C~~~~~~~~~~p~l~~~f-~g~~~~i 299 (359)
..+||||||++++||++++++|.+++.+... .....+. ++|+ .+|+|+|.| +|+.++|
T Consensus 213 ------~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~-------~~~~~~~~~~C~-------~~p~i~f~f~~g~~~~i 272 (334)
T 1j71_A 213 ------ADVVLDSGTTITYFSQSTADKFARIVGATWD-------SRNEIYRLPSCD-------LSGDAVFNFDQGVKITV 272 (334)
T ss_dssp ------EEEEECTTCSSEEECHHHHHHHHHHHTCEEE-------TTTTEEECSSSC-------CCSEEEEEESTTCEEEE
T ss_pred ------ccEEEeCCCCcEecCHHHHHHHHHHcCCccc-------CCCceEEEEcCC-------CCCceEEEEcCCcEEEE
Confidence 3699999999999999999999999976532 1123455 8997 579999999 5799999
Q ss_pred cCCceEEEEcCCCeEEEEEEcCCCceeecccceeeeEEEEECCCCEEEEeeCCCCCc
Q 045061 300 EPTYMYFIFQNEGYFCVAISFSDRNSVVGAWQQQDTRFVYDLNTGTIQFVPENCAND 356 (359)
Q Consensus 300 ~~~~y~~~~~~~~~~C~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~c~~~ 356 (359)
++++|++... ++..|+..+...+.||||.+|||++|+|||++++|||||+++|+.+
T Consensus 273 ~~~~y~~~~~-~~~~C~~~i~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~ 328 (334)
T 1j71_A 273 PLSELILKDS-DSSICYFGISRNDANILGDNFLRRAYIVYDLDDKTISLAQVKYTSS 328 (334)
T ss_dssp EGGGGEEECS-SSSCEEESEEECTTCEECHHHHTTEEEEEETTTTEEEEEEECCCSC
T ss_pred CHHHheeecC-CCCeeEEEEeECCCcEEChHhhccEEEEEECCCCEEEEEecCCCCc
Confidence 9999999864 3446986544446799999999999999999999999999999864
No 7
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1.1e-57 Score=420.48 Aligned_cols=300 Identities=20% Similarity=0.260 Sum_probs=252.2
Q ss_pred CCcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCCceE
Q 045061 2 EKNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCVNCFNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQCVH 81 (359)
Q Consensus 2 ~~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~~~~ 81 (359)
..++.|+++|.||||||++.|+|||||+++||+|..|..|.+ .++.|+|++|+|++.+.| |.|
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~-~~~~y~~~~SsT~~~~~~----------------~~~ 74 (329)
T 1oew_A 12 SLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV-XQTIYTPSKSTTAKLLSG----------------ATW 74 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC--CCCBCGGGCTTCEEEEE----------------EEE
T ss_pred CCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc-ccCccCCccCccceecCC----------------CeE
Confidence 367899999999999999999999999999999999999988 889999999999999654 899
Q ss_pred EEEeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeCCCCCCCC--CCcceEEecCCCCCc---------hHHhhhh
Q 045061 82 RINYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSNDNRDFSFD--GNIAGILGFSVSPFS---------LLGQLKS 150 (359)
Q Consensus 82 ~~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~GilGLg~~~~s---------~~~ql~~ 150 (359)
.+.|++|+.+.|.+++|+|+|+ ++.++++.||+++...+ .+. ...+||||||++..+ ++.+|.+
T Consensus 75 ~i~Yg~Gs~~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~~-~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~ 149 (329)
T 1oew_A 75 SISYGDGSSSSGDVYTDTVSVG----GLTVTGQAVESAKKVSS-SFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKA 149 (329)
T ss_dssp EEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECH-HHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTT
T ss_pred EEEeCCCCcEEEEEEEEEEEEC----CEEEeeeEEEEEEecCc-cccccCCCceEEEeccccccccCcCCCCCHHHHHHH
Confidence 9999999889999999999999 47899999999998765 332 478999999997544 4566554
Q ss_pred c-CCCceEEeccccCCCCCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCccccccCCCC
Q 045061 151 T-AQGLFSYCLVYAYREMEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFALRRNGTG 228 (359)
Q Consensus 151 ~-~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~ 228 (359)
. .+++||+||.+ ...|.|+|||+|. ++.+++.|+|+... ..+|.|.+++|+|+++.+.. . ..
T Consensus 150 ~i~~~~FS~~L~~-----~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~~v~l~~i~v~~~~~~~--~--------~~ 213 (329)
T 1oew_A 150 SLDSPVFTADLGY-----HAPGTYNFGFIDTTAYTGSITYTAVSTK-QGFWEWTSTGYAVGSGTFKS--T--------SI 213 (329)
T ss_dssp TSSSSEEEEECCS-----SSCEEEEESCCCTTSSSSCCEEEECBCT-TSSCEEEEEEEEETTSCCEE--E--------EE
T ss_pred hccCcEEEEEccC-----CCCeEEEEeccChHhcccceEEEEccCC-CceEEEEEeeEEECCeeccC--C--------Cc
Confidence 3 47899999986 3579999999994 68899999999853 67999999999999875531 1 14
Q ss_pred cEEEecCCcccccCchHHHHHHHHHHHHhhccCccccCCCccccccceecccCccccceEEEEEcCcEEEEcCCceEEEE
Q 045061 229 GCMIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNASEDWEYCYRYDSRFRAYASMTFHFDRADFKVEPTYMYFIF 308 (359)
Q Consensus 229 ~~iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~l~~~f~g~~~~i~~~~y~~~~ 308 (359)
.+||||||++++||++++++|.+++.+... ......+.++|+. .+|+|+|.|+|+.++||+++|++..
T Consensus 214 ~aiiDSGTt~~~lP~~~~~~l~~~i~~a~~------~~~~g~~~~~C~~------~~P~i~f~fgg~~~~ip~~~~~~~~ 281 (329)
T 1oew_A 214 DGIADTGTTLLYLPATVVSAYWAQVSGAKS------SSSVGGYVFPCSA------TLPSFTFGVGSARIVIPGDYIDFGP 281 (329)
T ss_dssp EEEECTTCCSEEECHHHHHHHHTTSTTCEE------ETTTTEEEEETTC------CCCCEEEEETTEEEEECHHHHEEEE
T ss_pred eEEEeCCCCCEECCHHHHHHHHHhCCCcEE------cCCCCEEEEECCC------CCCcEEEEECCEEEEECHHHeeeee
Confidence 799999999999999999999988743211 1112446689984 7999999999999999999999876
Q ss_pred cC-CCeEEEE-EEcCC--CceeecccceeeeEEEEEC-CCCEEEEeeC
Q 045061 309 QN-EGYFCVA-ISFSD--RNSVVGAWQQQDTRFVYDL-NTGTIQFVPE 351 (359)
Q Consensus 309 ~~-~~~~C~~-~~~~~--~~~iLG~~fl~~~y~vfD~-~~~~igfa~~ 351 (359)
.. +...|++ +...+ +.||||.+|||++|+|||+ +++|||||++
T Consensus 282 ~~~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 282 ISTGSSSCFGGIQSSAGIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp SSTTCSEEEESEEESTTTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred cCCCCCeEEEEEEeCCCCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 42 3478987 55443 6899999999999999999 9999999974
No 8
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=3.7e-58 Score=429.90 Aligned_cols=301 Identities=18% Similarity=0.290 Sum_probs=252.2
Q ss_pred CcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCC----CCCCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCC
Q 045061 3 KNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCV----NCFNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQ 78 (359)
Q Consensus 3 ~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~----~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~ 78 (359)
.+++|+++|.||||||+|.|+|||||+++||++..|. .| ..++.|||++|+||+...
T Consensus 59 ~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C--~~~~~y~~~~SsT~~~~~----------------- 119 (383)
T 2x0b_A 59 MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTAC--VYHKLFDASDSSSYKHNG----------------- 119 (383)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHH--HTSCCBCGGGCTTCEEEE-----------------
T ss_pred CCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccc--cCCCCCCCCCCCcEEECC-----------------
Confidence 4689999999999999999999999999999999996 46 457899999999999988
Q ss_pred ceEEEEeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeCCCCCCC-CCCcceEEecCCCCCc------hHHhhhhc
Q 045061 79 CVHRINYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSNDNRDFSF-DGNIAGILGFSVSPFS------LLGQLKST 151 (359)
Q Consensus 79 ~~~~~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~~~~~~~-~~~~~GilGLg~~~~s------~~~ql~~~ 151 (359)
|.|.+.|++|+ +.|.+++|+|+|+ ++.++ +.||+++.+.+..+ ...++||||||++..+ ++.+|.+.
T Consensus 120 ~~~~i~Yg~Gs-~~G~~~~Dtv~ig----~~~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~q 193 (383)
T 2x0b_A 120 TELTLRYSTGT-VSGFLSQDIITVG----GITVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQ 193 (383)
T ss_dssp EEEEEECSSCE-EEEEEEEEEEEET----TEEEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHTT
T ss_pred cEEEEEcCCcc-EEEEEEeeEEEEc----CceEE-EEEEEEEecCCcccccCCCceEeccCCCccccCCCCcHHHHHHhC
Confidence 79999999998 9999999999999 47888 99999998765112 2478999999998765 44555432
Q ss_pred ---CCCceEEeccccCCC-CCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCccccccCC
Q 045061 152 ---AQGLFSYCLVYAYRE-MEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFALRRNG 226 (359)
Q Consensus 152 ---~~~~fs~~l~~~~~~-~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~ 226 (359)
.+++||+||.+.... ....|.|+|||+|. .+.+++.|+|+.. ..+|.|.+++|+|+++.+... .
T Consensus 194 g~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~--~~~w~v~l~~i~v~~~~~~~~---------~ 262 (383)
T 2x0b_A 194 GVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIK--TGVWQIQMKGVSVGSSTLLCE---------D 262 (383)
T ss_dssp TCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSS--TTSCEEEECEEEESSCCCBST---------T
T ss_pred CCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCC--CceEEEEEeEEEeCCceEEcC---------C
Confidence 579999999985411 11489999999995 5889999999998 789999999999998764221 2
Q ss_pred CCcEEEecCCcccccCchHHHHHHHHHHHHhhccCccccCCCccccccceecccCccccceEEEEEcCcEEEEcCCceEE
Q 045061 227 TGGCMIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNASEDWEYCYRYDSRFRAYASMTFHFDRADFKVEPTYMYF 306 (359)
Q Consensus 227 ~~~~iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~l~~~f~g~~~~i~~~~y~~ 306 (359)
...+|+||||+++++|++++++|.+++++.. ....+.++|+..+ .+|+|+|.|+|+.++|+|++|++
T Consensus 263 ~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~---------~~g~~~v~C~~~~----~~P~i~f~~~g~~~~l~~~~yi~ 329 (383)
T 2x0b_A 263 GCLALVDTGASYISGSTSSIEKLMEALGAKK---------RLFDYVVKCNEGP----TLPDISFHLGGKEYTLTSADYVF 329 (383)
T ss_dssp CEEEEECTTCSSEEECHHHHHHHHHHHTCEE---------CSSCEEEEGGGTT----TCCCEEEEETTEEEEECHHHHBC
T ss_pred CcEEEEcCCCceEEcCHHHHHHHHHHhCCcc---------cCCcEEEeccccc----cCceEEEEECCEEEEECHHHhEe
Confidence 2579999999999999999999999986542 2345678999865 89999999999999999999998
Q ss_pred EEcCC-CeEEE-EEEcC------CCceeecccceeeeEEEEECCCCEEEEeeCC
Q 045061 307 IFQNE-GYFCV-AISFS------DRNSVVGAWQQQDTRFVYDLNTGTIQFVPEN 352 (359)
Q Consensus 307 ~~~~~-~~~C~-~~~~~------~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~ 352 (359)
+.... +..|+ +|... .+.||||++|||++|+|||++++|||||+++
T Consensus 330 ~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 330 QESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp CCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred eccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 76532 46898 46542 3589999999999999999999999999874
No 9
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=1.8e-57 Score=421.36 Aligned_cols=300 Identities=18% Similarity=0.276 Sum_probs=253.7
Q ss_pred CcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCC--CCCCC-------CCCCCCCCCCCCCCCceeecCCCCCCCCCCCC
Q 045061 3 KNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCL--PCVNC-------FNQSAPIFNPNASSTYKRIPCDDLICRRPPFR 73 (359)
Q Consensus 3 ~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~--~c~~c-------~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~ 73 (359)
+++.|+++|.||||||++.|+|||||+++||++. .|..| .|..++.|+|++|+|++..+
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~------------ 77 (342)
T 2qzx_A 10 EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLN------------ 77 (342)
T ss_dssp CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEE------------
T ss_pred CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCC------------
Confidence 5789999999999999999999999999999865 67644 34578899999999999988
Q ss_pred CCCCCceEEEEeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeCCCCCCCCCCcceEEecCCCCC--------chH
Q 045061 74 CENGQCVHRINYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSNDNRDFSFDGNIAGILGFSVSPF--------SLL 145 (359)
Q Consensus 74 c~~~~~~~~~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~GilGLg~~~~--------s~~ 145 (359)
|.|.+.|++|+.+.|.+++|+|+|+ ++.++++.||+++.... .+||||||++.. +++
T Consensus 78 -----~~~~i~Yg~Gs~~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~~------~~GilGLg~~~~~~~~~~~~~~~ 142 (342)
T 2qzx_A 78 -----TRFDIKYGDGSYAKGKLYKDTVGIG----GVSVRDQLFANVWSTSA------RKGILGIGFQSGEATEFDYDNLP 142 (342)
T ss_dssp -----EEEEEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECS------SSCEEECSCGGGCSSSSCCCCHH
T ss_pred -----CcEEEEeCCCCeEEEEEEEEEEEEC----CEEecceEEEEEEecCC------CcCEEEEccccccCCCccCccHH
Confidence 7999999999878999999999999 47889999999997644 689999999754 677
Q ss_pred Hhhhhc---CCCceEEeccccCCCCCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCccc
Q 045061 146 GQLKST---AQGLFSYCLVYAYREMEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFA 221 (359)
Q Consensus 146 ~ql~~~---~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~ 221 (359)
.||.+. .+++||+||.+.. ...|.|+|||+|. ++.+++.|+|+.. ..+|.|.+++|+|+++.+...
T Consensus 143 ~~L~~qg~i~~~~Fs~~l~~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~~~v~l~~i~v~g~~~~~~----- 212 (342)
T 2qzx_A 143 ISLRNQGIIGKAAYSLYLNSAE---ASTGQIIFGGIDKAKYSGSLVDLPITS--EKKLTVGLRSVNVRGRNVDAN----- 212 (342)
T ss_dssp HHHHHTTSSSSSEEEEECCCTT---CSEEEEEETEEETTSBSSCCEEEECCC--SSSCEEEEEEEEETTEEEEEE-----
T ss_pred HHHHHCCCcCccEEEEEeCCCC---CCCeEEEECccchhhEecceEEEeccC--CceEEEEEeEEEECCEecCCC-----
Confidence 777654 4789999998753 5689999999994 6889999999998 679999999999999877532
Q ss_pred cccCCCCcEEEecCCcccccCchHHHHHHHHHHHHhhccCccccCCCccccccceecccCccccceEEEEE-cCcEEEEc
Q 045061 222 LRRNGTGGCMIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNASEDWEYCYRYDSRFRAYASMTFHF-DRADFKVE 300 (359)
Q Consensus 222 ~~~~~~~~~iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~l~~~f-~g~~~~i~ 300 (359)
..+||||||++++||++++++|.+++.+..... ......+.++|+ .+|+|+|.| +|+.++|+
T Consensus 213 ------~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~----~~~~~~~~~~C~-------~~p~i~f~f~~g~~~~i~ 275 (342)
T 2qzx_A 213 ------TNVLLDSGTTISYFTRSIVRNILYAIGAQMKFD----SAGNKVYVADCK-------TSGTIDFQFGNNLKISVP 275 (342)
T ss_dssp ------EEEEECTTCSSEEECHHHHHHHHHHHTCEEEEC----TTSCEEEEECTT-------CCCEEEEEETTTEEEEEE
T ss_pred ------cCEEEeCCCCCEEcCHHHHHHHHHHhCCeeeec----cCCCcEEEEECC-------CCCcEEEEECCCcEEEEc
Confidence 369999999999999999999999997654211 111225678897 579999999 57999999
Q ss_pred CCceEEEEc----CCCeEEEEEEcCCCceeecccceeeeEEEEECCCCEEEEeeCCCCCc
Q 045061 301 PTYMYFIFQ----NEGYFCVAISFSDRNSVVGAWQQQDTRFVYDLNTGTIQFVPENCAND 356 (359)
Q Consensus 301 ~~~y~~~~~----~~~~~C~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~c~~~ 356 (359)
+++|+++.. .++..|+..+...+.||||.+|||++|+|||++++|||||+++|+.+
T Consensus 276 ~~~~~~~~~~~~~~~~~~C~~~i~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~ 335 (342)
T 2qzx_A 276 VSEFLFQTYYTSGKPFPKCEVRIRESEDNILGDNFLRSAYVVYNLDDKKISMAPVKYTSE 335 (342)
T ss_dssp GGGGEECCBCTTSCBCSSEEESEEECSSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSC
T ss_pred HHHhcccccccCCCCCCccEEEEecCCCcEeChHhhhcEEEEEECCCCEEEEEeeCCCCC
Confidence 999999742 12467987554456799999999999999999999999999999864
No 10
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=2.4e-57 Score=417.51 Aligned_cols=296 Identities=20% Similarity=0.303 Sum_probs=252.9
Q ss_pred CcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCCceEE
Q 045061 3 KNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCVNCFNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQCVHR 82 (359)
Q Consensus 3 ~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~~~~~ 82 (359)
.++.|+++|.||||||++.|++||||+++||+|..|..+.|..++.|+|++|+|++..+ |.|.
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~-----------------~~~~ 72 (324)
T 1am5_A 10 ADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSNHNKFKPRQSSTYVETG-----------------KTVD 72 (324)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHTSCCBCGGGCTTCEEEE-----------------EEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccCCCcCCCccCCCeEeCC-----------------cEEE
Confidence 47899999999999999999999999999999999975344567899999999999988 7999
Q ss_pred EEeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeCCCCCCCC--CCcceEEecCCCCCc------hHHhhhhc---
Q 045061 83 INYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSNDNRDFSFD--GNIAGILGFSVSPFS------LLGQLKST--- 151 (359)
Q Consensus 83 ~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~GilGLg~~~~s------~~~ql~~~--- 151 (359)
+.|++|+ +.|.+++|+|+|+ ++.++++.||+++...+ ..+ ...+||||||++..+ ++.+|.+.
T Consensus 73 i~Yg~Gs-~~G~~~~D~v~~g----~~~~~~~~fg~~~~~~~-~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i 146 (324)
T 1am5_A 73 LTYGTGG-MRGILGQDTVSVG----GGSDPNQELGESQTEPG-PFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLV 146 (324)
T ss_dssp EECSSCE-EEEEEEEEEEESS----SSCEEEEEEEEEEECCS-TTTTTCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCS
T ss_pred EEECCCC-eEEEEEECceeEC----CcEEcccEEEEEEeccc-ccccCCCCceEEecCCccccccCCCchHHhHHhcCCC
Confidence 9999998 6999999999999 46888999999998765 322 478999999998654 55566543
Q ss_pred CCCceEEeccccCCCCCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCccccccCCCCcE
Q 045061 152 AQGLFSYCLVYAYREMEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFALRRNGTGGC 230 (359)
Q Consensus 152 ~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~ 230 (359)
.+++||+||.+.. ...|.|+|||+|. ++.+++.|+|+.. ..+|.|.+++|+|+++.+.... ..+
T Consensus 147 ~~~~FS~~l~~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~~~v~l~~i~v~~~~~~~~~----------~~a 211 (324)
T 1am5_A 147 EKDLFSFYLSGGG---ANGSEVMLGGVDNSHYTGSIHWIPVTA--EKYWQVALDGITVNGQTAACEG----------CQA 211 (324)
T ss_dssp SSSEEEEECCSTT---CSCEEEEESSCCGGGBCSCCEEEEEEE--ETTEEEEECEEEETTEECCCCC----------EEE
T ss_pred CCCEEEEEecCCC---CCCcEEEECccCHHHcCCceEEEecCC--CcEEEEEEeEEEECCceeeccC----------ceE
Confidence 5799999998853 4589999999994 5889999999998 7899999999999998753211 479
Q ss_pred EEecCCcccccCchHHHHHHHHHHHHhhccCccccCCCccccccceecccCccccceEEEEEcCcEEEEcCCceEEEEcC
Q 045061 231 MIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNASEDWEYCYRYDSRFRAYASMTFHFDRADFKVEPTYMYFIFQN 310 (359)
Q Consensus 231 iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~l~~~f~g~~~~i~~~~y~~~~~~ 310 (359)
||||||++++||++++++|.+++.+. . ....+.++|+..+ .+|+|+|.|+|+.++|++++|++..
T Consensus 212 iiDSGTt~~~lp~~~~~~l~~~~~~~-~--------~~g~~~~~C~~~~----~~P~i~f~f~g~~~~i~~~~y~~~~-- 276 (324)
T 1am5_A 212 IVDTGTSKIVAPVSALANIMKDIGAS-E--------NQGEMMGNCASVQ----SLPDITFTINGVKQPLPPSAYIEGD-- 276 (324)
T ss_dssp EECTTCSSEEECTTTHHHHHHHHTCE-E--------CCCCEECCTTSSS----SSCCEEEEETTEEEEECHHHHEEES--
T ss_pred EEecCCccEECCHHHHHHHHHHhCCc-c--------cCCcEEEeCCCcc----cCCcEEEEECCEEEEECHHHhcccC--
Confidence 99999999999999999999998654 1 1234678999765 8999999999999999999999975
Q ss_pred CCeEEE-EEEcC------CCceeecccceeeeEEEEECCCCEEEEeeCC
Q 045061 311 EGYFCV-AISFS------DRNSVVGAWQQQDTRFVYDLNTGTIQFVPEN 352 (359)
Q Consensus 311 ~~~~C~-~~~~~------~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~ 352 (359)
+..|+ ++... .+.||||.+|||++|+|||++++|||||+++
T Consensus 277 -~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 277 -QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp -SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred -CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 46898 56543 2579999999999999999999999999975
No 11
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=5.5e-57 Score=415.02 Aligned_cols=299 Identities=21% Similarity=0.323 Sum_probs=253.2
Q ss_pred CCcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCCceE
Q 045061 2 EKNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCVNCFNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQCVH 81 (359)
Q Consensus 2 ~~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~~~~ 81 (359)
..++.|+++|.||||||++.|+|||||+++||++..|..| ++.++.|+|++|+||+... |.|
T Consensus 12 ~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c-~~~~~~y~~~~SsT~~~~~-----------------~~~ 73 (325)
T 2apr_A 12 GNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC-GSGQTKYDPNQSSTYQADG-----------------RTW 73 (325)
T ss_dssp TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC-CTTSCCBCGGGCTTCEEEE-----------------EEE
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH-hcCCCCCCcccCCCeeeCC-----------------CEE
Confidence 4678999999999999999999999999999999999999 8889999999999999976 799
Q ss_pred EEEeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeCCCCCCCC-CCcceEEecCCCCCc-------hHHhhhhc--
Q 045061 82 RINYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSNDNRDFSFD-GNIAGILGFSVSPFS-------LLGQLKST-- 151 (359)
Q Consensus 82 ~~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~~~~~~~~-~~~~GilGLg~~~~s-------~~~ql~~~-- 151 (359)
.+.|++|+.+.|.+++|+|+|+ ++.++++.||+++.... .+. ...+||||||++..+ ++.+|.+.
T Consensus 74 ~i~Yg~Gs~~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~~-~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~ 148 (325)
T 2apr_A 74 SISYGDGSSASGILAKDNVNLG----GLLIKGQTIELAKREAA-SFASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGL 148 (325)
T ss_dssp EEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECH-HHHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTS
T ss_pred EEEECCCCCEEEEEEEEEEEEC----CEEECcEEEEEEeccCc-ccccCCCceEEEeCCcccccccCCCCHHHHHHhcCC
Confidence 9999999889999999999998 47889999999998765 332 358999999997653 56666543
Q ss_pred -CCCceEEeccccCCCCCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCccccccCCCCc
Q 045061 152 -AQGLFSYCLVYAYREMEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFALRRNGTGG 229 (359)
Q Consensus 152 -~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~ 229 (359)
.+++||+||.+.. ....|.|+|||+|. ++.+++.|+|+... ..+|.|.+++|+|++. +.. . ...
T Consensus 149 i~~~~FS~~l~~~~--~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~~v~l~~i~vg~~-~~~--~--------~~~ 214 (325)
T 2apr_A 149 ISRPIFGVYLGKAK--NGGGGEYIFGGYDSTKFKGSLTTVPIDNS-RGWWGITVDRATVGTS-TVA--S--------SFD 214 (325)
T ss_dssp CSSSEEEEEECCGG--GTCCEEEEETCCCGGGBCSCCEEEECBCT-TSSCEEEECEEEETTE-EEE--C--------CEE
T ss_pred CCCceEEEEecCCC--CCCCCEEEEccCCchhccCceEEEEccCC-CCEEEEEEeEEEECCE-ecC--C--------Cce
Confidence 4789999997642 25689999999994 58899999999853 6799999999999983 321 1 247
Q ss_pred EEEecCCcccccCchHHHHHHHHHHHHhhccCccccCCCccccccceecccCccccceEEEEEcCcEEEEcCCceEEEEc
Q 045061 230 CMIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNASEDWEYCYRYDSRFRAYASMTFHFDRADFKVEPTYMYFIFQ 309 (359)
Q Consensus 230 ~iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~l~~~f~g~~~~i~~~~y~~~~~ 309 (359)
+||||||++++||+++|+++++++.+.+.. ...+.++|+.. .+|+|+|.|+|..++||+++|++...
T Consensus 215 ~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~--------~g~~~~~C~~~-----~~p~i~f~f~g~~~~ip~~~~~~~~~ 281 (325)
T 2apr_A 215 GILDTGTTLLILPNNIAASVARAYGASDNG--------DGTYTISCDTS-----AFKPLVFSINGASFQVSPDSLVFEEF 281 (325)
T ss_dssp EEECTTCSSEEEEHHHHHHHHHHHTCEECS--------SSCEEECSCGG-----GCCCEEEEETTEEEEECGGGGEEEEE
T ss_pred EEEecCCccEECCHHHHHHHHHHHhcccCC--------CCeEEEECCCC-----CCCcEEEEECCEEEEECHHHEEEcCC
Confidence 999999999999999999999998654321 14567899851 59999999999999999999998754
Q ss_pred CCCeEEEEE-EcC-CCceeecccceeeeEEEEECCCCEEEEeeCC
Q 045061 310 NEGYFCVAI-SFS-DRNSVVGAWQQQDTRFVYDLNTGTIQFVPEN 352 (359)
Q Consensus 310 ~~~~~C~~~-~~~-~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~ 352 (359)
+..|++. ... .+.||||.+|||++|+|||++++|||||+++
T Consensus 282 --~~~C~~~i~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 282 --QGQCIAGFGYGNWGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp --TTEEEESEEEESSSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred --CCeEEEEEEcCCCCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 5689874 433 4689999999999999999999999999864
No 12
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=1.3e-57 Score=419.06 Aligned_cols=297 Identities=18% Similarity=0.277 Sum_probs=251.6
Q ss_pred CcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCCceEE
Q 045061 3 KNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCVNCFNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQCVHR 82 (359)
Q Consensus 3 ~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~~~~~ 82 (359)
.+++|+++|.||||||++.|++||||+++||+|..|....|..++.|+|++|+||+..+ |.|.
T Consensus 12 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~-----------------~~~~ 74 (323)
T 3cms_A 12 LDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNHQRFDPRKSSTFQNLG-----------------KPLS 74 (323)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE-----------------EEEE
T ss_pred cCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccCCCCCCCccCCCeEECC-----------------cEEE
Confidence 47899999999999999999999999999999999943333567899999999999988 7999
Q ss_pred EEeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeCCCCCCCC--CCcceEEecCCCCCc------hHHhhhhc---
Q 045061 83 INYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSNDNRDFSFD--GNIAGILGFSVSPFS------LLGQLKST--- 151 (359)
Q Consensus 83 ~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~GilGLg~~~~s------~~~ql~~~--- 151 (359)
+.|++|+ +.|.+++|+|+|+ ++.++++.||+++...+ ..+ ...+||||||++..+ ++.+|.+.
T Consensus 75 i~Yg~Gs-~~G~~~~D~v~ig----~~~~~~~~fg~~~~~~~-~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q~~i 148 (323)
T 3cms_A 75 IHYGTGS-MQGILGYDTVTVS----NIVDIQQTVGLSTQEPG-DFFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLV 148 (323)
T ss_dssp EEETTEE-EEEEEEEEEEEET----TEEEEEEEEEEEEECCS-HHHHHSSCSEEEECSCGGGSCTTCCCHHHHHHHTTCS
T ss_pred EEeCCCC-eEEEEEEEEEEEC----CeEEeccEEEEEEeccc-ccccccCCceEEecCcchhhccCCCCHHHHHHHCCCC
Confidence 9999998 8999999999998 47889999999998754 222 478999999998654 55565543
Q ss_pred CCCceEEeccccCCCCCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCccccccCCCCcE
Q 045061 152 AQGLFSYCLVYAYREMEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFALRRNGTGGC 230 (359)
Q Consensus 152 ~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~ 230 (359)
.+++||+||.+.. ..|.|+|||+|. ++.+++.|+|+.. ..+|.|.+++|+|+++.+..+.. ..+
T Consensus 149 ~~~~FS~~l~~~~----~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~~~v~l~~i~v~~~~~~~~~~---------~~a 213 (323)
T 3cms_A 149 AQDLFSVYMDRNG----QESMLTLGAIDPSYYTGSLHWVPVTV--QQYWQFTVDSVTISGVVVACEGG---------CQA 213 (323)
T ss_dssp SSSEEEEECCTTS----SCEEEEESCCCGGGEEEEEEEEECSS--BTTBEEEEEEEEETTEEEESTTC---------EEE
T ss_pred CCCEEEEEECCCC----CCEEEEECCCChhhccCceEEEECcc--CCeEEEEEeeEEECCEEeecCCC---------cEE
Confidence 5799999998853 239999999994 5889999999997 68999999999999987754322 479
Q ss_pred EEecCCcccccCchHHHHHHHHHHHHhhccCccccCCCccccccceecccCccccceEEEEEcCcEEEEcCCceEEEEcC
Q 045061 231 MIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNASEDWEYCYRYDSRFRAYASMTFHFDRADFKVEPTYMYFIFQN 310 (359)
Q Consensus 231 iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~l~~~f~g~~~~i~~~~y~~~~~~ 310 (359)
||||||++++||++++++|.+++.+... ....+.++|+..+ .+|+|+|.|+|+.++|++++|++.
T Consensus 214 iiDSGTt~~~lP~~~~~~l~~~~~~~~~--------~~g~~~~~C~~~~----~~P~i~f~f~g~~~~i~~~~y~~~--- 278 (323)
T 3cms_A 214 ILDTGTSKLVGPSSDILNIQQAIGATQN--------QYGEFDIDCDNLS----YMPTVVFEINGKMYPLTPSAYTSQ--- 278 (323)
T ss_dssp EECTTCCSEEECHHHHHHHHHHHTCEEE--------TTTEEEECTTCTT----TSCCEEEEETTEEEEECHHHHEEE---
T ss_pred EEecCCccEeCCHHHHHHHHHHhCCeec--------CCCcEEEECCCCc----cCceEEEEECCEEEEECHHHhccC---
Confidence 9999999999999999999999854311 1245678999765 899999999999999999999998
Q ss_pred CCeEEEE-EEcC--CCceeecccceeeeEEEEECCCCEEEEeeCC
Q 045061 311 EGYFCVA-ISFS--DRNSVVGAWQQQDTRFVYDLNTGTIQFVPEN 352 (359)
Q Consensus 311 ~~~~C~~-~~~~--~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~ 352 (359)
.+..|+. +... .+.||||.+|||++|+|||++++|||||+++
T Consensus 279 ~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 279 DQGFCTSGFQSENHSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp ETTEEEESEEEC---CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCEEEEEEEeCCCCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 3468985 6654 3689999999999999999999999999875
No 13
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=1.1e-56 Score=424.77 Aligned_cols=331 Identities=20% Similarity=0.318 Sum_probs=258.3
Q ss_pred CcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCceeecCCCCCCCCC------------
Q 045061 3 KNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCVNCFNQSAPIFNPNASSTYKRIPCDDLICRRP------------ 70 (359)
Q Consensus 3 ~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~~------------ 70 (359)
.+++|+++|.||||||++.|+|||||+++||+|..| .+|+|++.+.|.+..|...
T Consensus 19 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~-------------~~Sst~~~~~C~s~~C~~~~~~~c~~c~~~~ 85 (403)
T 3aup_A 19 STGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ-------------YSSKTYQAPFCHSTQCSRANTHQCLSCPAAS 85 (403)
T ss_dssp TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC-------------CCCSSCBCCCTTBHHHHHTTCCCEEECSSSC
T ss_pred CCceEEEEEECCCCCceeEEEEECCCCceeECCCCC-------------CCCCCCCccCCCCccccCccccCccccCCCC
Confidence 578999999999999999999999999999998764 4789999999988777652
Q ss_pred CCCCCCCCceEEEEeC-CCCeEEEEEEEEEEEEecCCc-------eeecCceEEEceeCCCCCC-C-CCCcceEEecCCC
Q 045061 71 PFRCENGQCVHRINYA-GGASASGLVSTETFTFHLKNK-------LVCVPGVIFGCSNDNRDFS-F-DGNIAGILGFSVS 140 (359)
Q Consensus 71 ~~~c~~~~~~~~~~y~-~g~~~~G~~~~D~v~i~~~~~-------~~~~~~~~fg~~~~~~~~~-~-~~~~~GilGLg~~ 140 (359)
...|.++.|.|.+.|+ +++.+.|.+++|+|+|++.++ .+.++++.|||++.... . + ....+||||||++
T Consensus 86 ~s~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~-~~~~~~~~dGIlGLg~~ 164 (403)
T 3aup_A 86 RPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLV-QKGLPRNTQGVAGLGHA 164 (403)
T ss_dssp BTTBCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGG-SSSSSTTCCEEEECSSS
T ss_pred CCCCCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCccccc-ccCCCCCCceEEECCCC
Confidence 1245557899999998 787899999999999986321 17889999999998743 2 2 3478999999999
Q ss_pred CCchHHhhhhc--CCCceEEeccccCCCCCcceeEEECCCCc-cC--C-C-----CceeeeeecCCCCcEEEEEeEEEEC
Q 045061 141 PFSLLGQLKST--AQGLFSYCLVYAYREMEATSILRFGKDAN-IQ--R-K-----DMKTIRMFVDRSSHYYLSLQDISVA 209 (359)
Q Consensus 141 ~~s~~~ql~~~--~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~-~~--~-~-----~i~~~~~~~~~~~~w~v~l~~i~v~ 209 (359)
..+++.|+++. .+++||+||.+.. ...|.|+||| |. ++ . + ++.|+|++..+..+|.|.+++|+|+
T Consensus 165 ~~s~~~ql~~~~~~~~~FS~~L~~~~---~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l~~i~v~ 240 (403)
T 3aup_A 165 PISLPNQLASHFGLQRQFTTCLSRYP---TSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRIN 240 (403)
T ss_dssp TTSHHHHHHHHHTCCSEEEEECCSCT---TSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEECEEEEEET
T ss_pred CcCHHHHHHhhcCCCCeEEEEcCCCC---CCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEEEEEEEEC
Confidence 99999998753 5789999998753 5689999999 84 45 3 4 9999999985347999999999999
Q ss_pred CEEe-ecCCCccccccCCCCcEEEecCCcccccCchHHHHHHHHHHHHhhc-cCccccCCCccccccceecccCccccce
Q 045061 210 DHRI-GFAPGTFALRRNGTGGCMIDTGAIATFIQRGPYEVVMRHFDEHFTS-FGRQRMHNASEDWEYCYRYDSRFRAYAS 287 (359)
Q Consensus 210 ~~~~-~~~~~~~~~~~~~~~~~iiDtGt~~~~lp~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~C~~~~~~~~~~p~ 287 (359)
++.+ .++...++++..+...+||||||++++||++++++|.+++.+.+.. +.. .......+.++|.... .+|+
T Consensus 241 g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~-~~~~~~~~c~~c~~~~----~~P~ 315 (403)
T 3aup_A 241 QHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQV-KSVAPFGLCFNSNKIN----AYPS 315 (403)
T ss_dssp TEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEE-CCCTTCSCEECGGGCC----CCCC
T ss_pred CEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhcccccc-CCCCCCCceEECCCcC----cCCc
Confidence 9988 6666666555555678999999999999999999999999776531 111 0111122335565433 7999
Q ss_pred EEEEEcCc---EEEEcCCceEEEEcCCCeEEEEEEcCC----CceeecccceeeeEEEEECCCCEEEE-------eeCCC
Q 045061 288 MTFHFDRA---DFKVEPTYMYFIFQNEGYFCVAISFSD----RNSVVGAWQQQDTRFVYDLNTGTIQF-------VPENC 353 (359)
Q Consensus 288 l~~~f~g~---~~~i~~~~y~~~~~~~~~~C~~~~~~~----~~~iLG~~fl~~~y~vfD~~~~~igf-------a~~~c 353 (359)
|+|.|+|. .++|++++|++... ++..|++|...+ +.||||+.|||++|+|||++++|||| ++++|
T Consensus 316 i~f~f~g~~~~~~~l~~~~y~~~~~-~~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGf~A~~~~~~~~~C 394 (403)
T 3aup_A 316 VDLVMDKPNGPVWRISGEDLMVQAQ-PGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTSSLHSHGVKC 394 (403)
T ss_dssp EEEEESSTTCCEEEECHHHHEEEC----CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEEEEESSCGGGGTCCG
T ss_pred EEEEEcCCCceEEEEcccceEEEcC-CCeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEEEEecccccccCCCc
Confidence 99999985 99999999999764 457899887654 47999999999999999999999999 66777
Q ss_pred CCcc
Q 045061 354 ANDH 357 (359)
Q Consensus 354 ~~~~ 357 (359)
....
T Consensus 395 ~~~~ 398 (403)
T 3aup_A 395 ADLF 398 (403)
T ss_dssp GGSC
T ss_pred cccc
Confidence 6543
No 14
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=6.5e-58 Score=420.78 Aligned_cols=297 Identities=17% Similarity=0.286 Sum_probs=255.6
Q ss_pred CcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCCceEE
Q 045061 3 KNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCVNCFNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQCVHR 82 (359)
Q Consensus 3 ~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~~~~~ 82 (359)
.+.+|+++|.||||||+++|++||||+++||++..|..|.|..++.|+|++|+|++..+ |.|.
T Consensus 9 ~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~-----------------~~~~ 71 (320)
T 4aa9_A 9 LDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKNHHRFDPRKSSTFRNLG-----------------KPLS 71 (320)
T ss_dssp CCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE-----------------EEEE
T ss_pred cCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCCCCCCCCCCCcCeEcCC-----------------cEEE
Confidence 47899999999999999999999999999999999987666788999999999999988 7999
Q ss_pred EEeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeCCCCCCCC--CCcceEEecCCCCC------chHHhhhhc---
Q 045061 83 INYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSNDNRDFSFD--GNIAGILGFSVSPF------SLLGQLKST--- 151 (359)
Q Consensus 83 ~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~GilGLg~~~~------s~~~ql~~~--- 151 (359)
+.|++|+ +.|.+++|+|+|+ ++.++++.||+++.... ..+ ...+||||||++.. +++.+|.+.
T Consensus 72 i~Yg~gs-~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~~-~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i 145 (320)
T 4aa9_A 72 IHYGTGS-MEGFLGYDTVTVS----NIVDPNQTVGLSTEQPG-EVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLV 145 (320)
T ss_dssp EEETTEE-EEEEEEEEEEEET----TEEEEEEEEEEEEECCS-HHHHSCCCSEEEECSCGGGSCTTCCCHHHHHHHTTCS
T ss_pred EEECCcE-EEEEEEEEEEEEC----CEeecCeEEEEEEEccc-ccccccCcccEEecCcccccccCCCCHHHHHHhCCCC
Confidence 9999998 8999999999999 47899999999998765 322 36799999998754 356666543
Q ss_pred CCCceEEeccccCCCCCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCccccccCCCCcE
Q 045061 152 AQGLFSYCLVYAYREMEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFALRRNGTGGC 230 (359)
Q Consensus 152 ~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~ 230 (359)
.+++||+||.+. ...|.|+|||+|. ++.+++.|+|+.. ..+|.|.+++|+|+++.+..+.. ..+
T Consensus 146 ~~~~Fs~~l~~~----~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~w~v~l~~i~v~~~~~~~~~~---------~~~ 210 (320)
T 4aa9_A 146 ARDLFSVYMDRN----GQGSMLTLGAIDPSYYTGSLHWVPVTL--QQYWQFTVDSVTINGVAVACVGG---------CQA 210 (320)
T ss_dssp SSSEEEEECCSS----SSCCEEEETCCCGGGEEEEEEEEECSS--BTTBEEEECEEEETTEEEESTTC---------EEE
T ss_pred CCceEEEEeCCC----CCCeEEEEcccCHHHccCceEEEEccc--CCceEEEEeEEEECCEEeccCCC---------cEE
Confidence 578999999984 4679999999995 5889999999987 78999999999999987764322 479
Q ss_pred EEecCCcccccCchHHHHHHHHHHHHhhccCccccCCCccccccceecccCccccceEEEEEcCcEEEEcCCceEEEEcC
Q 045061 231 MIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNASEDWEYCYRYDSRFRAYASMTFHFDRADFKVEPTYMYFIFQN 310 (359)
Q Consensus 231 iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~l~~~f~g~~~~i~~~~y~~~~~~ 310 (359)
+|||||++++||++++++|.+++.+.. .....+.++|+..+ .+|+|+|.|+|+.++|++++|+.+.
T Consensus 211 iiDsGtt~~~lP~~~~~~i~~~~~~~~--------~~~g~~~~~C~~~~----~~p~i~f~f~g~~~~l~~~~y~~~~-- 276 (320)
T 4aa9_A 211 ILDTGTSVLFGPSSDILKIQMAIGATE--------NRYGEFDVNCGNLR----SMPTVVFEINGRDYPLSPSAYTSKD-- 276 (320)
T ss_dssp EECTTCSSEEEEHHHHHHHHHHTTCEE--------CTTSCEEECGGGGG----GCCCEEEEETTEEEEECHHHHEEEE--
T ss_pred EEECCCCcEECCHHHHHHHHHHhCCcc--------cCCCcEEEeCCCCC----cCceEEEEECCEEEEECHHHhccCC--
Confidence 999999999999999999999985431 12355778999875 8999999999999999999999863
Q ss_pred CCeEEEE-EEcCC--CceeecccceeeeEEEEECCCCEEEEeeCC
Q 045061 311 EGYFCVA-ISFSD--RNSVVGAWQQQDTRFVYDLNTGTIQFVPEN 352 (359)
Q Consensus 311 ~~~~C~~-~~~~~--~~~iLG~~fl~~~y~vfD~~~~~igfa~~~ 352 (359)
+..|+. +.... +.||||.+|||++|+|||++++|||||+++
T Consensus 277 -~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 277 -QGFCTSGFQGDNNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp -TTEEEESEEEETTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred -CCeEEEEEEcCCCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 468974 65533 579999999999999999999999999975
No 15
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=2.6e-57 Score=418.10 Aligned_cols=301 Identities=20% Similarity=0.309 Sum_probs=253.2
Q ss_pred CcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCCceEE
Q 045061 3 KNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCVNCFNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQCVHR 82 (359)
Q Consensus 3 ~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~~~~~ 82 (359)
.++.|+++|.||||||++.|+|||||+++||+|..|..|.|..++.|+|++|+||+... |.|.
T Consensus 11 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~-----------------~~~~ 73 (329)
T 1dpj_A 11 LNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHSKYDHEASSSYKANG-----------------TEFA 73 (329)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE-----------------EEEE
T ss_pred CCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCCcCcCCcccCcCeEECC-----------------cEEE
Confidence 46899999999999999999999999999999999987555677899999999999987 7999
Q ss_pred EEeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeCCCCCCC-CCCcceEEecCCCCCch------HHhhhhc---C
Q 045061 83 INYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSNDNRDFSF-DGNIAGILGFSVSPFSL------LGQLKST---A 152 (359)
Q Consensus 83 ~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~~~~~~~-~~~~~GilGLg~~~~s~------~~ql~~~---~ 152 (359)
+.|++|+ +.|.+++|+|+|+ ++.++++.||+++...+..+ ....+||||||++..++ +.+|.+. .
T Consensus 74 i~Yg~Gs-~~G~~~~D~v~ig----~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~ 148 (329)
T 1dpj_A 74 IQYGTGS-LEGYISQDTLSIG----DLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLD 148 (329)
T ss_dssp EEETTEE-EEEEEEEEEEEET----TEEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCCS
T ss_pred EEECCce-EEEEEEEEEEEEC----CeEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHHhcCCcC
Confidence 9999995 9999999999998 47889999999998653111 24789999999987653 3444432 4
Q ss_pred CCceEEeccccCCCCCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCccccccCCCCcEE
Q 045061 153 QGLFSYCLVYAYREMEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFALRRNGTGGCM 231 (359)
Q Consensus 153 ~~~fs~~l~~~~~~~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~i 231 (359)
+++||+||.+........|.|+|||+|. ++.+++.|+|+.. ..+|.|.+++|+|++..+.... ..+|
T Consensus 149 ~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~~~v~l~~i~v~~~~~~~~~----------~~ai 216 (329)
T 1dpj_A 149 EKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRR--KAYWEVKFEGIGLGDEYAELES----------HGAA 216 (329)
T ss_dssp SSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSS--BTTBEEEEEEEEETTEEEECSS----------CEEE
T ss_pred CCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCC--CceEEEEeeeEEECCeEecCCC----------ccEE
Confidence 7899999987532223579999999995 5889999999987 7899999999999998775322 4799
Q ss_pred EecCCcccccCchHHHHHHHHHHHHhhccCccccCCCccccccceecccCccccceEEEEEcCcEEEEcCCceEEEEcCC
Q 045061 232 IDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNASEDWEYCYRYDSRFRAYASMTFHFDRADFKVEPTYMYFIFQNE 311 (359)
Q Consensus 232 iDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~l~~~f~g~~~~i~~~~y~~~~~~~ 311 (359)
|||||++++||++++++|.+++.+. . .....+.++|+... .+|+|+|.|+|+.++|++++|+++..
T Consensus 217 iDSGTt~~~lP~~~~~~l~~~~~~~--~------~~~g~~~~~C~~~~----~~P~i~f~f~g~~~~i~~~~y~~~~~-- 282 (329)
T 1dpj_A 217 IDTGTSLITLPSGLAEMINAEIGAK--K------GWTGQYTLDCNTRD----NLPDLIFNFNGYNFTIGPYDYTLEVS-- 282 (329)
T ss_dssp ECTTCSCEEECHHHHHHHHHHHTCE--E------CTTSSEEECGGGGG----GCCCEEEEETTEEEEECTTTSEEEET--
T ss_pred eeCCCCcEECCHHHHHHHHHHhCCc--c------CCCCeEEEECCCCC----cCCcEEEEECCEEEEECHHHhEecCC--
Confidence 9999999999999999999998543 1 11345668998765 89999999999999999999999764
Q ss_pred CeEEE-EEEcC------CCceeecccceeeeEEEEECCCCEEEEeeCC
Q 045061 312 GYFCV-AISFS------DRNSVVGAWQQQDTRFVYDLNTGTIQFVPEN 352 (359)
Q Consensus 312 ~~~C~-~~~~~------~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~ 352 (359)
..|+ +|... .+.||||.+|||++|+|||++++|||||+++
T Consensus 283 -~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 283 -GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp -TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred -CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 5898 46543 2589999999999999999999999999975
No 16
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=4.7e-57 Score=416.46 Aligned_cols=300 Identities=19% Similarity=0.334 Sum_probs=253.3
Q ss_pred CcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCCceEE
Q 045061 3 KNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCVNCFNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQCVHR 82 (359)
Q Consensus 3 ~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~~~~~ 82 (359)
.++.|+++|.||||||++.|++||||+++||+|..|..+.|..++.|+|++|+|++... |.|.
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~-----------------~~~~ 72 (329)
T 1htr_B 10 MDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSHSRFNPSESSTYSTNG-----------------QTFS 72 (329)
T ss_dssp TTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE-----------------EEEE
T ss_pred cCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCCCCcCCCccCCCeEECC-----------------cEEE
Confidence 57899999999999999999999999999999999975334567899999999999988 7999
Q ss_pred EEeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeCCCCCCCC--CCcceEEecCCCCCc------hHHhhhhc---
Q 045061 83 INYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSNDNRDFSFD--GNIAGILGFSVSPFS------LLGQLKST--- 151 (359)
Q Consensus 83 ~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~GilGLg~~~~s------~~~ql~~~--- 151 (359)
+.|++|+ +.|.+++|+|+|+ ++.++++.||+++...+ ..+ ...+||||||++..+ ++.+|.+.
T Consensus 73 i~Yg~gs-~~G~~~~D~v~~g----~~~~~~~~fg~~~~~~~-~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i 146 (329)
T 1htr_B 73 LQYGSGS-LTGFFGYDTLTVQ----SIQVPNQEFGLSENEPG-TNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGAL 146 (329)
T ss_dssp EEETTEE-EEEEEEEEEEEET----TEEEEEEEEEEESSCSS-GGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHHTTCS
T ss_pred EEeCCCC-eEEEEEeeeEEEc----ceEECceEEEEEEEccc-cccccCCCceEEecCCCcccccCCCCHHHHHHhcCCC
Confidence 9999998 6999999999998 47899999999998765 322 478999999998764 55666543
Q ss_pred CCCceEEeccccCCCCCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCccccccCCCCcE
Q 045061 152 AQGLFSYCLVYAYREMEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFALRRNGTGGC 230 (359)
Q Consensus 152 ~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~ 230 (359)
.+++||+||.+... ...|.|+|||+|. ++.+++.|+|+.. ..+|.|.+++|+|+++.+.... ....+
T Consensus 147 ~~~~Fs~~L~~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~~~v~l~~i~v~~~~~~~~~--------~~~~a 214 (329)
T 1htr_B 147 TSPVFSVYLSNQQG--SSGGAVVFGGVDSSLYTGQIYWAPVTQ--ELYWQIGIEEFLIGGQASGWCS--------EGCQA 214 (329)
T ss_dssp SSSEEEEEECSSCS--SEEEEEEESSCCGGGEEEEEEEEEBCS--SSSCEEEECEEEETTEECCTTT--------TCEEE
T ss_pred CCCEEEEEEcCCCC--CCCcEEEEcccCHHHcCCceEEEECCC--CceEEEEEeEEEECCceeeecC--------CCceE
Confidence 47999999988541 2489999999995 5889999999997 7899999999999998754111 12479
Q ss_pred EEecCCcccccCchHHHHHHHHHHHHhhccCccccCCCccccccceecccCccccceEEEEEcCcEEEEcCCceEEEEcC
Q 045061 231 MIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNASEDWEYCYRYDSRFRAYASMTFHFDRADFKVEPTYMYFIFQN 310 (359)
Q Consensus 231 iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~l~~~f~g~~~~i~~~~y~~~~~~ 310 (359)
||||||++++||++++++|.+++.+... ....+.++|+..+ .+|+|+|.|+|+.++|++++|++...
T Consensus 215 iiDSGTt~~~lp~~~~~~l~~~~~~~~~--------~~g~~~~~C~~~~----~~P~i~f~f~g~~~~i~~~~y~~~~~- 281 (329)
T 1htr_B 215 IVDTGTSLLTVPQQYMSALLQATGAQED--------EYGQFLVNCNSIQ----NLPSLTFIINGVEFPLPPSSYILSNN- 281 (329)
T ss_dssp EECTTCCSEEEEGGGHHHHHHHHTCEEC--------TTSCEEECGGGGG----GSCCEEEEETTEEEEECHHHHEEECS-
T ss_pred EEecCCccEECCHHHHHHHHHHhCCeec--------CCCeEEEeCCCcc----cCCcEEEEECCEEEEECHHHhcccCC-
Confidence 9999999999999999999999855321 1234678999865 89999999999999999999999764
Q ss_pred CCeEEE-EEEcC------CC-ceeecccceeeeEEEEECCCCEEEEeeCC
Q 045061 311 EGYFCV-AISFS------DR-NSVVGAWQQQDTRFVYDLNTGTIQFVPEN 352 (359)
Q Consensus 311 ~~~~C~-~~~~~------~~-~~iLG~~fl~~~y~vfD~~~~~igfa~~~ 352 (359)
+ .|+ ++... .+ .||||.+|||++|+|||++++|||||+++
T Consensus 282 -g-~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 282 -G-YCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp -S-CEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred -C-EEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 3 898 46542 23 79999999999999999999999999874
No 17
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=4e-57 Score=419.36 Aligned_cols=302 Identities=20% Similarity=0.311 Sum_probs=253.1
Q ss_pred CCcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCC--CCCC-------CCCCCCCCCCCCCCCceeecCCCCCCCCCCC
Q 045061 2 EKNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLP--CVNC-------FNQSAPIFNPNASSTYKRIPCDDLICRRPPF 72 (359)
Q Consensus 2 ~~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~--c~~c-------~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~ 72 (359)
.++++|+++|.||||||++.|++||||+++||++.. |..| .|..++.|+|++|+|++..+
T Consensus 9 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~----------- 77 (342)
T 3pvk_A 9 NEQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLN----------- 77 (342)
T ss_dssp ECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEE-----------
T ss_pred cCCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecC-----------
Confidence 467899999999999999999999999999998754 6432 23468899999999999988
Q ss_pred CCCCCCceEEEEeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeCCCCCCCCCCcceEEecCCCC-------CchH
Q 045061 73 RCENGQCVHRINYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSNDNRDFSFDGNIAGILGFSVSP-------FSLL 145 (359)
Q Consensus 73 ~c~~~~~~~~~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~GilGLg~~~-------~s~~ 145 (359)
|.|.+.|++|+.+.|.+++|+|+|+ ++.++++.||+++.... .+||||||++. .+++
T Consensus 78 ------~~~~i~Yg~gs~~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~~------~~GilGLg~~~~~~~~~~~~~~ 141 (342)
T 3pvk_A 78 ------TPFKIGYGDGSSSQGTLYKDTVGFG----GVSIKNQVLADVDSTSI------DQGILGVGYKTNEAGGSYDNVP 141 (342)
T ss_dssp ------EEEEEECSSSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEESS------SSCEEECSCGGGCSSCSSCCHH
T ss_pred ------CeEEEEecCCCeEEEEEEEEEEEEC----CEEecceEEEEEEccCC------CccEEEecCccccccccCCcHH
Confidence 7999999999889999999999999 48899999999987654 68999999986 3577
Q ss_pred Hhhhhc---CCCceEEeccccCCCCCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCccc
Q 045061 146 GQLKST---AQGLFSYCLVYAYREMEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFA 221 (359)
Q Consensus 146 ~ql~~~---~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~ 221 (359)
.||.+. .+++||+||.+.. ...|.|+|||+|. ++.+++.|+|+.. ..+|.|.+++|.|+++.+...+
T Consensus 142 ~~L~~qg~i~~~~fs~~l~~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~~~v~l~~i~v~g~~~~~~~---- 212 (342)
T 3pvk_A 142 VTLKKQGVIAKNAYSLYLNSPD---AATGQIIFGGVDNAKYSGSLIALPVTS--DRELRISLGSVEVSGKTINTDN---- 212 (342)
T ss_dssp HHHHHTTSSSSSEEEEECCCTT---CSEEEEEETEEETTSBSSCCEEEECCC--SSSCEEEEEEEEETTEEEEEEE----
T ss_pred HHHHhcCCCCCceEEEEeCCCC---CCCcEEEECccCccceeeeeEEeecCc--cceEEEEEeEEEECCEEecCCC----
Confidence 787654 5789999998754 5689999999994 5889999999998 6799999999999999876532
Q ss_pred cccCCCCcEEEecCCcccccCchHHHHHHHHHHHHhhccCccccCCCccccccceecccCccccceEEEEEc-CcEEEEc
Q 045061 222 LRRNGTGGCMIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNASEDWEYCYRYDSRFRAYASMTFHFD-RADFKVE 300 (359)
Q Consensus 222 ~~~~~~~~~iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~l~~~f~-g~~~~i~ 300 (359)
..++|||||++++||++++++|.+++.+..... ......+.++|+ ..|+|+|.|+ |..++||
T Consensus 213 ------~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~----~~~~~~~~~~C~-------~~p~i~f~f~~g~~~~vp 275 (342)
T 3pvk_A 213 ------VDVLLDSGTTITYLQQDLADQIIKAFNGKLTQD----SNGNSFYEVDCN-------LSGDVVFNFSKNAKISVP 275 (342)
T ss_dssp ------EEEEECTTCSSEEECHHHHHHHHHHTTCEEEEC----TTSCEEEEECSC-------CCSEEEEEESTTCEEEEE
T ss_pred ------ceEEEeCCCCCeecCHHHHHHHHHHcCCeeccc----CCCceEEEEecC-------CCCceEEEECCCCEEEEc
Confidence 369999999999999999999999997654321 111234778998 4599999998 7899999
Q ss_pred CCceEEEEcC-CC---eEEEEEEcCCCceeecccceeeeEEEEECCCCEEEEeeCCCCCc
Q 045061 301 PTYMYFIFQN-EG---YFCVAISFSDRNSVVGAWQQQDTRFVYDLNTGTIQFVPENCAND 356 (359)
Q Consensus 301 ~~~y~~~~~~-~~---~~C~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~c~~~ 356 (359)
+++|+++... ++ ..|+..+...+.||||.+|||++|+|||++++|||||+++|+.+
T Consensus 276 ~~~~~~~~~~~~g~~~~~C~~~i~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~ 335 (342)
T 3pvk_A 276 ASEFAASLQGDDGQPYDKCQLLFDVNDANILGDNFLRSAYIVYDLDDNEISLAQVKYTSA 335 (342)
T ss_dssp GGGGEEC----------CEEESEEECTTCEECHHHHTTEEEEEETTTTEEEEEEBCCCSC
T ss_pred HHHheeeccccCCCcCCeeEEEEeeCCCeEeCHHHHhcEEEEEECCCCEEEEEecCCCCC
Confidence 9999997421 22 67976554457899999999999999999999999999999864
No 18
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=1.1e-56 Score=415.79 Aligned_cols=300 Identities=19% Similarity=0.295 Sum_probs=253.9
Q ss_pred CcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCC--CCCC-CCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCCc
Q 045061 3 KNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLP--CVNC-FNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQC 79 (359)
Q Consensus 3 ~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~--c~~c-~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~~ 79 (359)
.+++|+++|.||||||++.|++||||+++||++.. |..| .|..++.|+|++|+||+..+ |
T Consensus 10 ~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~~~y~~~~SsT~~~~~-----------------~ 72 (339)
T 3fv3_A 10 EGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNLG-----------------A 72 (339)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTTCCBCGGGCTTCEEEE-----------------E
T ss_pred CCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCCCcCCCccCcceeeCC-----------------c
Confidence 56899999999999999999999999999998543 4433 23468899999999999988 7
Q ss_pred eEEEEeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeCCCCCCCCCCcceEEecCCCCCc----------------
Q 045061 80 VHRINYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSNDNRDFSFDGNIAGILGFSVSPFS---------------- 143 (359)
Q Consensus 80 ~~~~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~GilGLg~~~~s---------------- 143 (359)
.|.+.|++|+.+.|.+++|+|+|+ ++.++++.||+++.... .+||||||++..+
T Consensus 73 ~~~i~Yg~gs~~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~~------~~GilGLg~~~~~~~~~~~~~~~~~~~~~ 142 (339)
T 3fv3_A 73 AFTIRYGDGSTSQGTWGKDTVTIN----GVSITGQQIADVTQTSV------DQGILGIGYTSNEAVYDTSGRQTTPNYDN 142 (339)
T ss_dssp EEEEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEESS------SSCEEECSCGGGCCCBCTTSCBCSCCCCC
T ss_pred eEEEEECCCceEEEEEEEEEEEEC----CEEECceEEEEEEecCC------CceeEEecCccccccccccccccCccCCc
Confidence 999999999779999999999999 47899999999998765 5899999997643
Q ss_pred hHHhhhhc---CCCceEEeccccCCCCCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCc
Q 045061 144 LLGQLKST---AQGLFSYCLVYAYREMEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGT 219 (359)
Q Consensus 144 ~~~ql~~~---~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~ 219 (359)
++.||.+. .+++||+||.+.. ...|.|+|||+|. ++.+++.|+|+.. ..+|.|.+++|.|+++.+...
T Consensus 143 ~~~~L~~~g~i~~~~fsl~l~~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~~~v~l~~i~v~g~~~~~~--- 214 (339)
T 3fv3_A 143 VPVTLKKQGKIRTNAYSLYLNSPS---AETGTIIFGGVDNAKYSGKLVAEQVTS--SQALTISLASVNLKGSSFSFG--- 214 (339)
T ss_dssp HHHHHHHTTSCSSSEEEEECCCTT---CSEEEEEETEEETTSBSSCCEEEEBCC--SSSCEEEEEEEEESSCEEEEE---
T ss_pred HHHHHHHCCCCCCceEEEEECCCC---CCCeEEEEeeechHHeecceEEEeccc--CccEEEEEEEEEECCEeecCC---
Confidence 67777653 5789999998754 5689999999994 5889999999998 679999999999999877542
Q ss_pred cccccCCCCcEEEecCCcccccCchHHHHHHHHHHHHhhccCccccCCCccccccceecccCccccceEEEEEc-CcEEE
Q 045061 220 FALRRNGTGGCMIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNASEDWEYCYRYDSRFRAYASMTFHFD-RADFK 298 (359)
Q Consensus 220 ~~~~~~~~~~~iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~l~~~f~-g~~~~ 298 (359)
..++|||||++++||++++++|.+++.+..... ......+.++|+.. .+|+|+|.|+ |+.++
T Consensus 215 --------~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~----~~~~~~~~~~C~~~-----~~p~i~f~f~~g~~~~ 277 (339)
T 3fv3_A 215 --------DGALLDSGTTLTYFPSDFAAQLADKAGARLVQV----ARDQYLYFIDCNTD-----TSGTTVFNFGNGAKIT 277 (339)
T ss_dssp --------EEEEECTTBSSEEECHHHHHHHHHHHTCEEEEE----ETTEEEEEECTTCC-----CCSEEEEEETTSCEEE
T ss_pred --------ccEEEeCCCCCEecCHHHHHHHHHHcCCEEccc----cccCceEEEecCCC-----CCCcEEEEECCCCEEE
Confidence 369999999999999999999999997654210 01235577899862 6899999995 79999
Q ss_pred EcCCceEEEEcCCCeEEE-EEEcCCCceeecccceeeeEEEEECCCCEEEEeeCCCCCcc
Q 045061 299 VEPTYMYFIFQNEGYFCV-AISFSDRNSVVGAWQQQDTRFVYDLNTGTIQFVPENCANDH 357 (359)
Q Consensus 299 i~~~~y~~~~~~~~~~C~-~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~c~~~~ 357 (359)
|++++|+++.. ...|+ ++.. .+.||||.+|||++|+|||++++|||||+++|+.++
T Consensus 278 v~~~~~~~~~~--~~~C~~~i~~-~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~s 334 (339)
T 3fv3_A 278 VPNTEYVYQNG--DGTCLWGIQP-SDDTILGDNFLRHAYLLYNLDANTISIAQVKYTTDS 334 (339)
T ss_dssp EEGGGGEEECS--SSCEEESEEE-CSSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCC
T ss_pred ECHHHheeeCC--CCeEEEEEEe-CCcEEeChHHHhCEEEEEECCCCEEEEEecCCCCcc
Confidence 99999999753 35684 5665 568999999999999999999999999999998653
No 19
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=2.4e-56 Score=417.65 Aligned_cols=295 Identities=16% Similarity=0.274 Sum_probs=252.3
Q ss_pred CcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCCceEE
Q 045061 3 KNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCVNCFNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQCVHR 82 (359)
Q Consensus 3 ~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~~~~~ 82 (359)
.++.|+++|.||||||++.|+|||||+++||+|..|..+.|..++.|+|++|+||+... |.|.
T Consensus 60 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~-----------------~~~~ 122 (375)
T 1miq_A 60 ANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSIKNLYDSSKSKSYEKDG-----------------TKVD 122 (375)
T ss_dssp BCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGGSCCBCGGGCTTCEEEE-----------------EEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccCCCcCCCccCCceEECC-----------------cEEE
Confidence 46899999999999999999999999999999999975556678999999999999987 7999
Q ss_pred EEeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeC----CCCCCC-CCCcceEEecCCCCCc------hHHhhhhc
Q 045061 83 INYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSND----NRDFSF-DGNIAGILGFSVSPFS------LLGQLKST 151 (359)
Q Consensus 83 ~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~----~~~~~~-~~~~~GilGLg~~~~s------~~~ql~~~ 151 (359)
+.|++|+ +.|.+++|+|+|+ ++.+++ .||+++. +.. + ....+||||||++..+ ++.+|.+.
T Consensus 123 i~Yg~Gs-~~G~~~~Dtv~ig----~~~v~~-~Fg~~~~~~~~~~~--f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~q 194 (375)
T 1miq_A 123 ITYGSGT-VKGFFSKDLVTLG----HLSMPY-KFIEVTDTDDLEPI--YSSVEFDGILGLGWKDLSIGSIDPIVVELKNQ 194 (375)
T ss_dssp EEETTEE-EEEEEEEEEEEET----TEEEEE-EEEEEEECGGGTTH--HHHSCCCEEEECSSCCTTCSSCCCHHHHHHHT
T ss_pred EEeCCCe-EEEEEEEEEEEEc----CceECc-EEEEEEeccccccc--cccCCCceEEeCCCCcccccCCCCHHHHHHhc
Confidence 9999998 8999999999999 478888 9999998 432 2 2468999999998754 45565543
Q ss_pred ---CCCceEEeccccCCCCCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCccccccCCC
Q 045061 152 ---AQGLFSYCLVYAYREMEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFALRRNGT 227 (359)
Q Consensus 152 ---~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~ 227 (359)
.+++||+||.+.. ...|.|+|||+|. .+.+++.|+|+.. ..+|.|.++ |+|+++.+ . .
T Consensus 195 g~i~~~~FS~~L~~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~w~v~l~-i~v~g~~~---~---------~ 256 (375)
T 1miq_A 195 NKIDNALFTFYLPVHD---VHAGYLTIGGIEEKFYEGNITYEKLNH--DLYWQIDLD-VHFGKQTM---E---------K 256 (375)
T ss_dssp TSSSSSEEEEECCTTC---TTEEEEEESSCCGGGEEEEEEEEEBSS--SSSSEEEEE-EEETTEEE---E---------E
T ss_pred cCcCCCEEEEEecCCC---CCCeEEEEcccCHHHcCCceEEEecCC--CceEEEEEE-EEECCEEc---c---------c
Confidence 5799999999853 3689999999994 5889999999987 789999999 99999876 1 1
Q ss_pred CcEEEecCCcccccCchHHHHHHHHHHHHhhccCccccCCCccccccceecccCccccceEEEEEcCcEEEEcCCceEEE
Q 045061 228 GGCMIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNASEDWEYCYRYDSRFRAYASMTFHFDRADFKVEPTYMYFI 307 (359)
Q Consensus 228 ~~~iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~l~~~f~g~~~~i~~~~y~~~ 307 (359)
..+||||||++++||++++++|.+++.+... .....+.++|+. . .+|+|+|.|+|+.++|+|++|++.
T Consensus 257 ~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~-------~~~g~~~~~C~~-~----~~P~i~f~f~g~~~~l~~~~yi~~ 324 (375)
T 1miq_A 257 ANVIVDSGTTTITAPSEFLNKFFANLNVIKV-------PFLPFYVTTCDN-K----EMPTLEFKSANNTYTLEPEYYMNP 324 (375)
T ss_dssp EEEEECTTBSSEEECHHHHHHHHHHHTCEEC-------TTSSCEEEETTC-T----TCCCEEEECSSCEEEECGGGSEEE
T ss_pred ceEEecCCCccEEcCHHHHHHHHHHhCCccc-------CCCCeEEEECCC-C----CCCcEEEEECCEEEEECHHHhEee
Confidence 4799999999999999999999999865421 113457789997 3 899999999999999999999998
Q ss_pred EcC-CCeEEE-EEEcCC---CceeecccceeeeEEEEECCCCEEEEeeCC
Q 045061 308 FQN-EGYFCV-AISFSD---RNSVVGAWQQQDTRFVYDLNTGTIQFVPEN 352 (359)
Q Consensus 308 ~~~-~~~~C~-~~~~~~---~~~iLG~~fl~~~y~vfD~~~~~igfa~~~ 352 (359)
... +...|+ +|...+ +.||||.+|||++|+|||++++|||||+++
T Consensus 325 ~~~~g~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 325 ILEVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp SSSSSCSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred ccCCCCCeEEEEEEECCCCCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 643 346897 677655 689999999999999999999999999874
No 20
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=3.8e-56 Score=412.62 Aligned_cols=302 Identities=18% Similarity=0.269 Sum_probs=252.9
Q ss_pred CcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCCCC--CCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCCce
Q 045061 3 KNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCVNC--FNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQCV 80 (359)
Q Consensus 3 ~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~~c--~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~~~ 80 (359)
.+..|+++|.||||||+++|++||||+++||++..|..| .|..++.|+|++|+|++... |.
T Consensus 16 ~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~~~y~~~~SsT~~~~~-----------------~~ 78 (341)
T 3k1w_A 16 MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNG-----------------TE 78 (341)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTSCCBCGGGCTTCEEEE-----------------EE
T ss_pred cCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCCCCCCCCcCcCeeECC-----------------CE
Confidence 368999999999999999999999999999999999732 23567899999999999987 79
Q ss_pred EEEEeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeCCCCCC-C-CCCcceEEecCCCCCc------hHHhhhh--
Q 045061 81 HRINYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSNDNRDFS-F-DGNIAGILGFSVSPFS------LLGQLKS-- 150 (359)
Q Consensus 81 ~~~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~~~~~~-~-~~~~~GilGLg~~~~s------~~~ql~~-- 150 (359)
|.+.|++|+ +.|.+++|+|+|+ ++.+ ++.||+++.... . + ....+||||||++..+ ++.+|.+
T Consensus 79 ~~i~Yg~gs-~~G~~~~D~v~ig----~~~v-~~~fg~~~~~~~-~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg 151 (341)
T 3k1w_A 79 LTLRYSTGT-VSGFLSQDIITVG----GITV-TQMFGEVTEMPA-LPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQG 151 (341)
T ss_dssp EEEEETTEE-EEEEEEEEEEEET----TEEE-EEEEEEEEECCH-HHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHHHT
T ss_pred EEEEECCcE-EEEEEEEEEEEEC----Ccee-eEEEEEEEEccc-cccccCCcceEEECCchhhcccCCCCHHHHHHHCC
Confidence 999999998 9999999999999 4778 999999998875 3 2 2478999999998765 5556554
Q ss_pred -cCCCceEEeccccCCC-CCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCccccccCCC
Q 045061 151 -TAQGLFSYCLVYAYRE-MEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFALRRNGT 227 (359)
Q Consensus 151 -~~~~~fs~~l~~~~~~-~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~ 227 (359)
+.+++||+||.+...+ ....|.|+|||+|. .+.+++.|+|+.. ..+|.|.+++|+|++..+.....
T Consensus 152 ~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~w~v~l~~i~v~~~~~~~~~~--------- 220 (341)
T 3k1w_A 152 VLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIK--TGVWQIQMKGVSVGSSTLLCEDG--------- 220 (341)
T ss_dssp CBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSS--TTSCEEEECCEEETTEEEECTTC---------
T ss_pred CCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCC--CCEEEEEEeEEEECCEEeecCCC---------
Confidence 3579999999975421 13489999999994 5889999999997 78999999999999987543222
Q ss_pred CcEEEecCCcccccCchHHHHHHHHHHHHhhccCccccCCCccccccceecccCccccceEEEEEcCcEEEEcCCceEEE
Q 045061 228 GGCMIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNASEDWEYCYRYDSRFRAYASMTFHFDRADFKVEPTYMYFI 307 (359)
Q Consensus 228 ~~~iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~l~~~f~g~~~~i~~~~y~~~ 307 (359)
..++|||||++++||++++++|.+++.+... . .. +.++|.... .+|+|+|.|+|+.++|++++|++.
T Consensus 221 ~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~------~--~g-~~~~C~~~~----~~p~i~f~f~g~~~~l~~~~~~~~ 287 (341)
T 3k1w_A 221 CLALVDTGASYISGSTSSIEKLMEALGAKKR------L--FD-YVVKCNEGP----TLPDISFHLGGKEYTLTSADYVFQ 287 (341)
T ss_dssp EEEEECTTCSSEEECHHHHHHHHHHHTCEEC------S--SC-EEEEGGGGG----GCCCEEEEETTEEEEECHHHHBCC
T ss_pred CEEEEECCCChhcCCHHHHHHHHHHcCCeec------C--CC-eEEeCCCCC----cCCcEEEEECCEEEEECHHHheeE
Confidence 4799999999999999999999999865421 1 23 778999765 899999999999999999999987
Q ss_pred EcC-CCeEEEE-EEcC------CCceeecccceeeeEEEEECCCCEEEEeeCC
Q 045061 308 FQN-EGYFCVA-ISFS------DRNSVVGAWQQQDTRFVYDLNTGTIQFVPEN 352 (359)
Q Consensus 308 ~~~-~~~~C~~-~~~~------~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~ 352 (359)
... ++..|+. +... .+.||||.+|||++|+|||++++|||||+++
T Consensus 288 ~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 288 ESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp SCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 543 3579984 6542 2589999999999999999999999999986
No 21
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=1.5e-55 Score=405.38 Aligned_cols=297 Identities=18% Similarity=0.202 Sum_probs=249.8
Q ss_pred CcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCCceEE
Q 045061 3 KNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCVNCFNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQCVHR 82 (359)
Q Consensus 3 ~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~~~~~ 82 (359)
.++.|+++|.|| ||++.|+|||||+++||++..|..|.|+.++.|+|++|+ ++... |.|.
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~~-----------------~~~~ 71 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQTGHDLYTPSSSA-TKLSG-----------------YSWD 71 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHHTTSCCCBCCSSC-EECTT-----------------CBEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccccCCCCCCCchhcC-CccCC-----------------CEEE
Confidence 578999999999 999999999999999999999999988889999999999 54333 7999
Q ss_pred EEeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeCCCCCCCC--CCcceEEecCCCCCc---------hHHhhhhc
Q 045061 83 INYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSNDNRDFSFD--GNIAGILGFSVSPFS---------LLGQLKST 151 (359)
Q Consensus 83 ~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~GilGLg~~~~s---------~~~ql~~~ 151 (359)
+.|++|+.+.|.+++|+|+|+ ++.++++.||+++.... .+. ...+||||||++..+ ++.||.+.
T Consensus 72 i~Yg~Gs~~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~~-~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~ 146 (325)
T 1ibq_A 72 ISYGDGSSASGDVYRDTVTVG----GVTTNKQAVEAASKISS-EFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKSQ 146 (325)
T ss_dssp EECSSSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECH-HHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG
T ss_pred EEeCCCCEEEEEEEEeEEEEC----CEEEcceEEEEEEecCc-cccccCCCceEEEeCcccccccCcCCCCCHHHHHHHh
Confidence 999999889999999999999 47899999999998764 332 378999999997654 45676543
Q ss_pred -CCCceEEeccccCCCCCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCccccccCCCCc
Q 045061 152 -AQGLFSYCLVYAYREMEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFALRRNGTGG 229 (359)
Q Consensus 152 -~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~ 229 (359)
.+++||+||.+ ...|.|+|||+|. ++.+++.|+|+... ..+|.|.+++|+|+++.+.. . ...
T Consensus 147 i~~~~FS~~l~~-----~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~w~v~l~~i~v~~~~~~~--~--------~~~ 210 (325)
T 1ibq_A 147 LDSPLFAVQLKH-----DAPGVYDFGYIDDSKYTGSITYTDADSS-QGYWGFSTDGYSIGDGSSSS--S--------GFS 210 (325)
T ss_dssp SSSSEEEEEEET-----TEEEEEEESSCCGGGBSSCCEEEECBCT-TSSCEEEECEEEETTSCCBS--C--------CEE
T ss_pred cCCcEEEEEecC-----CCCceEEECCcChhhccCceEEEEcCCC-CceEEEEECcEEECCeeccC--C--------Cce
Confidence 57999999986 3689999999994 68999999999853 67999999999999875531 1 247
Q ss_pred EEEecCCcccccCchHHHHHHHHHHHHhhccCccccCCCccccccceecccCccccceEEEEEcCcEEEEcCCceEEEEc
Q 045061 230 CMIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNASEDWEYCYRYDSRFRAYASMTFHFDRADFKVEPTYMYFIFQ 309 (359)
Q Consensus 230 ~iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~l~~~f~g~~~~i~~~~y~~~~~ 309 (359)
+||||||++++||++++++|.+++.+.. .......+.++|+. .+|+|+|.|+|+.++||+++|++...
T Consensus 211 aiiDSGTt~~~lP~~~~~~i~~~i~~a~------~~~~~g~~~~~C~~------~~P~i~f~fgg~~~~i~~~~~~~~~~ 278 (325)
T 1ibq_A 211 AIADTGTTLILLDDEIVSAYYEQVSGAQ------ESYEAGGYVFSCST------DLPDFTVVIGDYKAVVPGKYINYAPV 278 (325)
T ss_dssp EEECTTCCSEEECHHHHHHHHTTSTTCB------CCSSSSSCEEETTC------CCCCEEEEETTEEEEECHHHHEEEES
T ss_pred EEEeCCCCcEeCCHHHHHHHHHhCCCce------EcCcCCeEEEEcCC------CCCcEEEEECCEEEEECHHHhccccc
Confidence 9999999999999999999999874321 11123456789984 78999999999999999999998764
Q ss_pred C-CCeEEEE-EEcCC--CceeecccceeeeEEEEECCCCEEEEeeCC
Q 045061 310 N-EGYFCVA-ISFSD--RNSVVGAWQQQDTRFVYDLNTGTIQFVPEN 352 (359)
Q Consensus 310 ~-~~~~C~~-~~~~~--~~~iLG~~fl~~~y~vfD~~~~~igfa~~~ 352 (359)
. +...|++ +...+ +.||||.+|||++|+|||++++|||||+++
T Consensus 279 ~~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 279 STGSSTCYGGIQSNSGLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp STTCSEEEESEEECTTTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCCCCeEEEEEEcCCCCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 3 3379987 55433 689999999999999999999999999864
No 22
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=2.3e-55 Score=403.76 Aligned_cols=295 Identities=16% Similarity=0.185 Sum_probs=248.3
Q ss_pred CcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCCceEE
Q 045061 3 KNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCVNCFNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQCVHR 82 (359)
Q Consensus 3 ~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~~~~~ 82 (359)
.++.|+++|.|| ||++.|+|||||+++||+|..|..|.|..++.|+|++|+ ++..+ |.|.
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~~-----------------~~~~ 72 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSERSGHDYYTPGSSA-QKIDG-----------------ATWS 72 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTCCCBCCCTTC-EEEEE-----------------EEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCcccccCCCCCCccccC-CccCC-----------------CeEE
Confidence 578999999999 899999999999999999999999888889999999999 66445 7999
Q ss_pred EEeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeCCCCCCCC--CCcceEEecCCCCCc---------hHHhhhh-
Q 045061 83 INYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSNDNRDFSFD--GNIAGILGFSVSPFS---------LLGQLKS- 150 (359)
Q Consensus 83 ~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~GilGLg~~~~s---------~~~ql~~- 150 (359)
+.|++|+.+.|.+++|+|+|+ ++.++++.||+++.... .+. ...+||||||++..+ ++.+|.+
T Consensus 73 i~Yg~Gs~~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~~-~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~ 147 (323)
T 1izd_A 73 ISYGDGSSASGDVYKDKVTVG----GVSYDSQAVESAEKVSS-EFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSS 147 (323)
T ss_dssp EECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECH-HHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG
T ss_pred EEcCCCCeEEEEEEEEEEEEC----CEEECceEEEEEEeccc-cccccCCCceEEecCcccccccCCCCCCCHHHHHHHh
Confidence 999999889999999999999 47899999999998765 332 478999999997544 4556543
Q ss_pred cCCCceEEeccccCCCCCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCccccccCCCCc
Q 045061 151 TAQGLFSYCLVYAYREMEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFALRRNGTGG 229 (359)
Q Consensus 151 ~~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~ 229 (359)
+.+++||+||.+ ...|.|+|||+|. ++.+++.|+|+... ..+|.|.+++|+|++ .+. .. ...
T Consensus 148 i~~~~FS~~L~~-----~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~w~v~l~~i~v~~-~~~--~~--------~~~ 210 (323)
T 1izd_A 148 LSEPIFAVALKH-----NAPGVYDFGYTDSSKYTGSITYTDVDNS-QGFWGFTADGYSIGS-DSS--SD--------SIT 210 (323)
T ss_dssp SSSSEEEEECCT-----TSCEEEEESSCCTTSEEEEEEEEECBCT-TSSCEEEESEEEETT-EEE--CC--------CEE
T ss_pred ccCcEEEEEccC-----CCCCEEEECCcCccccccceEEEECCCC-CceEEEEECeEEECC-ccc--CC--------Cce
Confidence 357999999986 3579999999995 58899999999843 679999999999999 543 11 247
Q ss_pred EEEecCCcccccCchHHHHHHHHHHHHhhccCccccCCCccccccceecccCccccceEEEEEcCcEEEEcCCceEEEEc
Q 045061 230 CMIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNASEDWEYCYRYDSRFRAYASMTFHFDRADFKVEPTYMYFIFQ 309 (359)
Q Consensus 230 ~iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~l~~~f~g~~~~i~~~~y~~~~~ 309 (359)
+|+||||+++++|++++++|.+++.+... ......+.++|+. .+|+|+|.|+|+.++||+++|++...
T Consensus 211 aiiDSGTs~~~lp~~~~~~i~~~i~ga~~------~~~~g~~~~~C~~------~~P~i~f~fgg~~~~i~~~~~~~~~~ 278 (323)
T 1izd_A 211 GIADTGTTLLLLDDSIVDAYYEQVNGASY------DSSQGGYVFPSSA------SLPDFSVTIGDYTATVPGEYISFADV 278 (323)
T ss_dssp EEECTTCCSEEECHHHHHHHHTTSTTCEE------ETTTTEEEEETTC------CCCCEEEEETTEEEEECHHHHEEEEC
T ss_pred EEEeCCCcceeCCHHHHHHHHHhCCCcEE------cCcCCEEEEECCC------CCceEEEEECCEEEecCHHHeEEecC
Confidence 99999999999999999999988743211 1113456788984 79999999999999999999998764
Q ss_pred CCCeEEEE-EEcCC--CceeecccceeeeEEEEECCCCEEEEeeCC
Q 045061 310 NEGYFCVA-ISFSD--RNSVVGAWQQQDTRFVYDLNTGTIQFVPEN 352 (359)
Q Consensus 310 ~~~~~C~~-~~~~~--~~~iLG~~fl~~~y~vfD~~~~~igfa~~~ 352 (359)
++..|++ +...+ +.||||.+|||++|+|||++++|||||+++
T Consensus 279 -~~~~C~~~i~~~~~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 279 -GNGQTFGGIQSNSGIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp -STTEEEESEEECTTTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred -CCCeEEEEEEcCCCCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 4578987 66543 689999999999999999999999999863
No 23
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=2.3e-55 Score=403.87 Aligned_cols=295 Identities=19% Similarity=0.249 Sum_probs=247.8
Q ss_pred CcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCCceEE
Q 045061 3 KNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCVNCFNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQCVHR 82 (359)
Q Consensus 3 ~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~~~~~ 82 (359)
.++.|+++|.|| ||++.|+|||||+++||++..|..|.|..++.|+|++|+ ++..+ |.|.
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~~-----------------~~~~ 72 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQSGHSVYNPSATG-KELSG-----------------YTWS 72 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCHHHHC-EEEEE-----------------EEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhccCCCCCCcccCC-cccCC-----------------CeEE
Confidence 578999999999 999999999999999999999999988889999999999 66555 7999
Q ss_pred EEeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeCCCCCCCC--CCcceEEecCCCCCc---------hHHhhhh-
Q 045061 83 INYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSNDNRDFSFD--GNIAGILGFSVSPFS---------LLGQLKS- 150 (359)
Q Consensus 83 ~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~GilGLg~~~~s---------~~~ql~~- 150 (359)
+.|++|+.+.|.+++|+|+|+ ++.++++.||+++.... .+. ...+||||||++..+ ++.+|.+
T Consensus 73 i~Yg~Gs~~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~~-~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~ 147 (323)
T 1bxo_A 73 ISYGDGSSASGNVFTDSVTVG----GVTAHGQAVQAAQQISA-QFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSS 147 (323)
T ss_dssp EECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECH-HHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGG
T ss_pred EEeCCCCeEEEEEEEEEEEEC----CEEECcEEEEEEEecCc-ccccCCCCceEEEeCcccccccccCCCCCHHHHHHHh
Confidence 999999889999999999999 47899999999998765 332 478999999997543 4556554
Q ss_pred cCCCceEEeccccCCCCCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCccccccCCCCc
Q 045061 151 TAQGLFSYCLVYAYREMEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFALRRNGTGG 229 (359)
Q Consensus 151 ~~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~ 229 (359)
+.+++||+||.+ ...|.|+|||+|. ++.+++.|+|+... ..+|.|.+++|+|++ .. .. ...
T Consensus 148 i~~~~FS~~L~~-----~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~w~v~l~~i~v~~-~~---~~--------~~~ 209 (323)
T 1bxo_A 148 LAQPLFAVALKH-----QQPGVYDFGFIDSSKYTGSLTYTGVDNS-QGFWSFNVDSYTAGS-QS---GD--------GFS 209 (323)
T ss_dssp BSSSEEEEECCS-----SSCEEEEESSCCGGGBSSCCEEEECBCT-TSSCEEEEEEEEETT-EE---EE--------EEE
T ss_pred cCCcEEEEEEeC-----CCCceEEEeCcChhhccCceEEEECCCC-CCeEEEEEeeEEECC-cc---CC--------Cce
Confidence 357999999986 3579999999994 58999999999853 679999999999998 21 11 147
Q ss_pred EEEecCCcccccCchHHHHHHHHHHHHhhccCccccCCCccccccceecccCccccceEEEEEcCcEEEEcCCceEEEEc
Q 045061 230 CMIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNASEDWEYCYRYDSRFRAYASMTFHFDRADFKVEPTYMYFIFQ 309 (359)
Q Consensus 230 ~iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~l~~~f~g~~~~i~~~~y~~~~~ 309 (359)
+||||||+++++|++++++|.+++.+... ......+.++|+. .+|+|+|.|+|+.++||+++|++...
T Consensus 210 aiiDSGTs~~~lP~~~~~~l~~~i~~a~~------~~~~g~~~~~C~~------~~P~i~f~fgg~~~~l~~~~~~~~~~ 277 (323)
T 1bxo_A 210 GIADTGTTLLLLDDSVVSQYYSQVSGAQQ------DSNAGGYVFDCST------NLPDFSVSISGYTATVPGSLINYGPS 277 (323)
T ss_dssp EEECTTCSSEEECHHHHHHHHTTSTTCEE------ETTTTEEEECTTC------CCCCEEEEETTEEEEECHHHHEEEEC
T ss_pred EEEeCCCCceeCCHHHHHHHHHhCCCceE------cCcCCEEEEECCC------CCceEEEEECCEEEEECHHHeEEecc
Confidence 99999999999999999999998743211 1123456689984 78999999999999999999998764
Q ss_pred CCCeEEEE-EEcCC--CceeecccceeeeEEEEECCCCEEEEeeCC
Q 045061 310 NEGYFCVA-ISFSD--RNSVVGAWQQQDTRFVYDLNTGTIQFVPEN 352 (359)
Q Consensus 310 ~~~~~C~~-~~~~~--~~~iLG~~fl~~~y~vfD~~~~~igfa~~~ 352 (359)
.+...|+. +...+ +.||||.+|||++|+|||++++|||||+++
T Consensus 278 ~~~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 278 GDGSTCLGGIQSNSGIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp SSSSCEEESEEECTTCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCCCeEEEEEECCCCCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 33478987 55543 689999999999999999999999999864
No 24
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=3.1e-55 Score=416.63 Aligned_cols=295 Identities=18% Similarity=0.299 Sum_probs=251.1
Q ss_pred CcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCCceEE
Q 045061 3 KNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCVNCFNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQCVHR 82 (359)
Q Consensus 3 ~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~~~~~ 82 (359)
.++.|+++|.||||||++.|++||||+++||+|..|..+.|..++.|+|++|+||+..+ |.|.
T Consensus 136 ~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~~~~ydps~SsT~~~~~-----------------~~~~ 198 (453)
T 2bju_A 136 QNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTKHLYDSSKSRTYEKDG-----------------TKVE 198 (453)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGGSCCBCGGGCTTCEEEE-----------------EEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCCCCcCCCccCCceeECC-----------------cEEE
Confidence 46899999999999999999999999999999999986666778999999999999988 7999
Q ss_pred EEeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeCCC--CCCCC--CCcceEEecCCCCCc------hHHhhhhc-
Q 045061 83 INYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSNDNR--DFSFD--GNIAGILGFSVSPFS------LLGQLKST- 151 (359)
Q Consensus 83 ~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~~~--~~~~~--~~~~GilGLg~~~~s------~~~ql~~~- 151 (359)
+.|++|+ +.|.+++|+|+++ ++.++ +.||+++... + ..+ ...+||||||++..+ ++.+|.+.
T Consensus 199 i~YgdGs-~~G~~~~Dtv~ig----~~~v~-~~Fg~a~~~~~~g-~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg 271 (453)
T 2bju_A 199 MNYVSGT-VSGFFSKDLVTVG----NLSLP-YKFIEVIDTNGFE-PTYTASTFDGILGLGWKDLSIGSVDPIVVELKNQN 271 (453)
T ss_dssp EECSSSE-EEEEEEEEEEEET----TEEEE-EEEEEEEECGGGT-THHHHSSCCEEEECSCGGGSTTCCCCHHHHHHHTT
T ss_pred EEcCCCC-eEEEEEEEEEEEe----CcEEE-EEEEEEEEecccC-ccccccCCceeEeccCCcccccCCCcHHHHHHHCC
Confidence 9999998 8999999999999 47888 9999999876 4 222 478999999997654 45565543
Q ss_pred --CCCceEEeccccCCCCCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCccccccCCCC
Q 045061 152 --AQGLFSYCLVYAYREMEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFALRRNGTG 228 (359)
Q Consensus 152 --~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~ 228 (359)
.+++||+||.+.. ...|.|+|||+|. .+.+++.|+|+.. ..+|.|.++ |+|++ .+. . ..
T Consensus 272 ~i~~~~FS~~L~~~~---~~~G~l~fGg~D~~~y~G~l~~~pv~~--~~~w~V~l~-I~Vgg-~~~---~--------~~ 333 (453)
T 2bju_A 272 KIENALFTFYLPVHD---KHTGFLTIGGIEERFYEGPLTYEKLNH--DLYWQITLD-AHVGN-IML---E--------KA 333 (453)
T ss_dssp SSSSCEEEEECCBTT---TBCEEEEESSCCGGGEEEEEEEEEEEE--ETTEEEEEE-EEETT-EEE---E--------EE
T ss_pred CCCCCEEEEEeCCCC---CCCeEEEECCCCHHHcCCceEEEecCC--CceEEEEEE-EEECc-EEe---c--------cc
Confidence 4799999999853 5689999999994 5889999999998 789999999 99999 332 1 14
Q ss_pred cEEEecCCcccccCchHHHHHHHHHHHHhhccCccccCCCc-cccccceecccCccccceEEEEEcCcEEEEcCCceEEE
Q 045061 229 GCMIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNAS-EDWEYCYRYDSRFRAYASMTFHFDRADFKVEPTYMYFI 307 (359)
Q Consensus 229 ~~iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~C~~~~~~~~~~p~l~~~f~g~~~~i~~~~y~~~ 307 (359)
.+|+||||+++++|++++++|.+++.+. + .... .+.++|+. . .+|+|+|.|+|+.++|+|++|++.
T Consensus 334 ~aIiDSGTsl~~lP~~~~~~l~~~i~~~---~-----~~~g~~~~v~C~~-~----~~P~itf~fgg~~~~l~~~~yi~~ 400 (453)
T 2bju_A 334 NCIVDSGTSAITVPTDFLNKMLQNLDVI---K-----VPFLPFYVTLCNN-S----KLPTFEFTSENGKYTLEPEYYLQH 400 (453)
T ss_dssp EEEECTTCCSEEECHHHHHHHTTTSSCE---E-----CTTSSCEEEETTC-T----TCCCEEEECSSCEEEECHHHHEEE
T ss_pred cEEEcCCCCeEecCHHHHHHHHHHhCCc---c-----cCCCceEEEecCC-C----CCCcEEEEECCEEEEECHHHhEee
Confidence 7999999999999999999999887542 1 1123 56789987 3 899999999999999999999998
Q ss_pred EcC-CCeEEE-EEEcCC---CceeecccceeeeEEEEECCCCEEEEeeCC
Q 045061 308 FQN-EGYFCV-AISFSD---RNSVVGAWQQQDTRFVYDLNTGTIQFVPEN 352 (359)
Q Consensus 308 ~~~-~~~~C~-~~~~~~---~~~iLG~~fl~~~y~vfD~~~~~igfa~~~ 352 (359)
... +...|+ ++...+ +.||||++|||++|+|||++++|||||+++
T Consensus 401 ~~~~g~~~C~~~~~~~~~~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 401 IEDVGPGLCMLNIIGLDFPVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp CTTTSTTEEEECEEECCCSSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred cccCCCceEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 653 346897 566554 489999999999999999999999999976
No 25
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=6.5e-55 Score=401.89 Aligned_cols=298 Identities=12% Similarity=0.157 Sum_probs=250.0
Q ss_pred CcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCC--CCCCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCCce
Q 045061 3 KNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCV--NCFNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQCV 80 (359)
Q Consensus 3 ~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~--~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~~~ 80 (359)
.++.|+++|.|| ||++.|+|||||+++||++..|. .|.+..++.|+|++| ||+..+ +.
T Consensus 15 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~~~y~~~~S-T~~~~~-----------------~~ 74 (330)
T 1yg9_A 15 INTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCPNLQKYEKLKP-KYISDG-----------------NV 74 (330)
T ss_dssp ECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGSTTCCCCCCSSC-EEEEEE-----------------EE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcccccCccCCCCC-ceEECC-----------------CE
Confidence 367899999999 99999999999999999999997 564467889999999 999877 78
Q ss_pred EEEEeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeCCCCCCC-CCCcceEEecCCCCCc-------hHHhhhhc-
Q 045061 81 HRINYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSNDNRDFSF-DGNIAGILGFSVSPFS-------LLGQLKST- 151 (359)
Q Consensus 81 ~~~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~~~~~~~-~~~~~GilGLg~~~~s-------~~~ql~~~- 151 (359)
|.+.|++|+ +.|.+++|+|+|+ ++.++++.||+++.... .+ ....+||||||++..+ ++.+|.+.
T Consensus 75 ~~i~Yg~Gs-~~G~~~~Dtv~ig----~~~~~~~~fg~~~~~~~-~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg 148 (330)
T 1yg9_A 75 QVKFFDTGS-AVGRGIEDSLTIS----QLTTSQQDIVLADELSQ-EVCILSADVVVGIAAPGCPNALKGKTVLENFVEEN 148 (330)
T ss_dssp EEEETTTEE-EEEEEEEEEEEET----TEEEEEEEEEEEEEECT-HHHHTTCSEEEECSCTTSCCTTSCCCHHHHHHHTT
T ss_pred EEEEECCce-EEEEEEEEEEEEC----CEEEcCeEEEEEEEccc-ccccccCceEEEcCcchhccccCCCCHHHHHHhcC
Confidence 999999998 6999999999999 47899999999998743 22 2378999999998766 66666542
Q ss_pred -CCCceEEeccccCCCCCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCccccccCCCCc
Q 045061 152 -AQGLFSYCLVYAYREMEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFALRRNGTGG 229 (359)
Q Consensus 152 -~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~ 229 (359)
.+++||+||.+.. +....|.|+|||+|. ++.+++.|+|+.. ..+|.|.+++|+|+++.+. .. ...
T Consensus 149 ~i~~~FS~~l~~~~-~~~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~w~v~l~~i~v~~~~~~-~~---------~~~ 215 (330)
T 1yg9_A 149 LIAPVFSIHHARFQ-DGEHFGEIIFGGSDWKYVDGEFTYVPLVG--DDSWKFRLDGVKIGDTTVA-PA---------GTQ 215 (330)
T ss_dssp SSCSEEEEEEEECT-TSCEEEEEEETSCCGGGEEEEEEEEEBSC--TTSCCEECSEEEETTEEEE-CT---------TCE
T ss_pred CCCceEEEEEcCCC-CCCCCCEEEECCcCHHHccCceEEEECCC--CCEEEEEeCeEEECCEEEc-CC---------CcE
Confidence 3899999998753 123489999999995 5889999999997 7899999999999998764 11 247
Q ss_pred EEEecCCcccccCchHHHHHHHHHHHHhhccCccccCCCccc-cccceecccCccccceEEEEEcCcEEEEcCCceEEEE
Q 045061 230 CMIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNASED-WEYCYRYDSRFRAYASMTFHFDRADFKVEPTYMYFIF 308 (359)
Q Consensus 230 ~iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~C~~~~~~~~~~p~l~~~f~g~~~~i~~~~y~~~~ 308 (359)
+||||||++++||++++++|.+++.+... ..+...+ .++|+... .+|+|+|.|+|+.++|++++|++..
T Consensus 216 aiiDSGTs~~~lP~~~~~~l~~~~~~~~~------~~g~~~~~~~~C~~~~----~~p~i~f~fgg~~~~l~~~~y~~~~ 285 (330)
T 1yg9_A 216 AIIDTSKAIIVGPKAYVNPINEAIGCVVE------KTTTRRICKLDCSKIP----SLPDVTFVINGRNFNISSQYYIQQN 285 (330)
T ss_dssp EEECTTCSSEEEEHHHHHHHHHHHTCEEE------ECSSCEEEEECGGGGG----GSCCEEEEETTEEEEECHHHHEEEE
T ss_pred EEEecCCccccCCHHHHHHHHHHhCCccc------CCCceEEEEEECCCcc----ccCcEEEEECCEEEEECHHHhcccC
Confidence 99999999999999999999999855421 1111146 78898765 7999999999999999999999976
Q ss_pred cCCCeEEEE-EEc--CCCceeecccceeeeEEEEECCCCEEEEeeCC
Q 045061 309 QNEGYFCVA-ISF--SDRNSVVGAWQQQDTRFVYDLNTGTIQFVPEN 352 (359)
Q Consensus 309 ~~~~~~C~~-~~~--~~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~ 352 (359)
+..|+. +.. ..+.||||.+|||++|+|||++++|||||+++
T Consensus 286 ---~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 286 ---GNLCYSGFQPCGHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp ---TTEEEESEEEETTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ---CCcEEEEEEeCCCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 468974 554 23689999999999999999999999999864
No 26
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=1e-53 Score=402.26 Aligned_cols=319 Identities=16% Similarity=0.228 Sum_probs=248.2
Q ss_pred CcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCCceEE
Q 045061 3 KNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCVNCFNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQCVHR 82 (359)
Q Consensus 3 ~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~~~~~ 82 (359)
.+..|+++|.||||||++.|+|||||+++||++..|..| ++.|+|++|+||+... |.|.
T Consensus 11 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~----~~~f~~~~SsT~~~~~-----------------~~~~ 69 (383)
T 2ewy_A 11 SGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYI----DTYFDTERSSTYRSKG-----------------FDVT 69 (383)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTB----SCCCCGGGCTTCEEEE-----------------EEEE
T ss_pred CCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCcc----ccCcccccCccceeCC-----------------ceEE
Confidence 356799999999999999999999999999999988654 6789999999999988 7999
Q ss_pred EEeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeCCCCCCCC--CCcceEEecCCCCCc--------hHHhhhhc-
Q 045061 83 INYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSNDNRDFSFD--GNIAGILGFSVSPFS--------LLGQLKST- 151 (359)
Q Consensus 83 ~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~GilGLg~~~~s--------~~~ql~~~- 151 (359)
+.|++|+ +.|.+++|+|+|++. ......+.|++...... .+. ...+||||||++..+ ++.+|.+.
T Consensus 70 i~Yg~Gs-~~G~~~~Dtv~i~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~ 145 (383)
T 2ewy_A 70 VKYTQGS-WTGFVGEDLVTIPKG--FNTSFLVNIATIFESEN-FFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQA 145 (383)
T ss_dssp EECSSCE-EEEEEEEEEEEETTT--EEEEEEEEEEEEEEEES-CSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHH
T ss_pred EEECCcE-EEEEEEEEEEEECCC--ccceeEEEEEEEEeecc-eeeccCcCceEEecCchhcccccccccCHHHHHHHcc
Confidence 9999998 799999999999852 11111356777655443 222 368999999997653 33343322
Q ss_pred -CCCceEEecccc----CCCCCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCccccccC
Q 045061 152 -AQGLFSYCLVYA----YREMEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFALRRN 225 (359)
Q Consensus 152 -~~~~fs~~l~~~----~~~~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~ 225 (359)
.+++||+||.+. .......|.|+|||+|. .+.+++.|+|+.. ..+|.|.+++|+|+++.+.++...+.
T Consensus 146 ~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~~~v~l~~i~v~g~~~~~~~~~~~---- 219 (383)
T 2ewy_A 146 NIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKE--EWYYQIEILKLEIGGQSLNLDCREYN---- 219 (383)
T ss_dssp TCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSS--BTTBBCCEEEEEETTEECCCCTTTTT----
T ss_pred CCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCC--CceEEEEEEEEEECCEEccccccccC----
Confidence 268999999752 11235689999999994 5889999999998 68999999999999998765443221
Q ss_pred CCCcEEEecCCcccccCchHHHHHHHHHHHHhhccCccccCCC-ccccccceecccC-ccccceEEEEEcCc------EE
Q 045061 226 GTGGCMIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNA-SEDWEYCYRYDSR-FRAYASMTFHFDRA------DF 297 (359)
Q Consensus 226 ~~~~~iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~C~~~~~~-~~~~p~l~~~f~g~------~~ 297 (359)
...+||||||++++||++++++|.+++.+....... .... ..+.++|+..... ...+|+|+|.|+|. .+
T Consensus 220 -~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~--~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~ 296 (383)
T 2ewy_A 220 -ADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEF--SDGFWTGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRI 296 (383)
T ss_dssp -SSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCC--CHHHHHTSEEEEECSSSCGGGGSCCEEEEEECSSTTEEEEE
T ss_pred -CccEEEEcCCccccCCHHHHHHHHHHHhhhcccccC--ccccccccccccccCCcccHhhCCcEEEEECCCCCCceEEE
Confidence 247999999999999999999999999887532210 0000 1246899875322 24699999999974 79
Q ss_pred EEcCCceEEEEcC--CCeEEEE--EEcCCCceeecccceeeeEEEEECCCCEEEEeeCCCCC
Q 045061 298 KVEPTYMYFIFQN--EGYFCVA--ISFSDRNSVVGAWQQQDTRFVYDLNTGTIQFVPENCAN 355 (359)
Q Consensus 298 ~i~~~~y~~~~~~--~~~~C~~--~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~c~~ 355 (359)
+|+|++|+.+... .+..|++ +....+.||||..|||++|+|||++++|||||+++|..
T Consensus 297 ~l~~~~yi~~~~~~~~~~~C~~~~i~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 358 (383)
T 2ewy_A 297 TILPQLYIQPMMGAGLNYECYRFGISPSTNALVIGATVMEGFYVIFDRAQKRVGFAASPCAE 358 (383)
T ss_dssp EECHHHHEEEECCCTTCSEEEEESEEEESSCEEECHHHHTTEEEEEETTTTEEEEEECTTCB
T ss_pred EEChHHheeecccCCCCceeEEEEecCCCCcEEEChHHhCCeeEEEECCCCeEEEEeccCCC
Confidence 9999999987642 3568975 34445689999999999999999999999999999974
No 27
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=8e-55 Score=414.33 Aligned_cols=296 Identities=16% Similarity=0.221 Sum_probs=250.6
Q ss_pred CcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCCceEE
Q 045061 3 KNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCVNCFNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQCVHR 82 (359)
Q Consensus 3 ~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~~~~~ 82 (359)
.+..|+++|.||||||++.|++||||+++||++..|....|..++.|+|++|+|++..+ +.|.
T Consensus 135 ~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~~~~ydps~SsT~~~~~-----------------~~f~ 197 (451)
T 3qvc_A 135 ANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCESKNHYDSSKSKTYEKDD-----------------TPVK 197 (451)
T ss_dssp BCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEE-----------------EEEE
T ss_pred CCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCCCCCCCCCCCcccccCC-----------------CEEE
Confidence 46789999999999999999999999999999999964445678999999999999987 7999
Q ss_pred EEeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeC----CCCCCCCCCcceEEecCCCCC------chHHhhhhc-
Q 045061 83 INYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSND----NRDFSFDGNIAGILGFSVSPF------SLLGQLKST- 151 (359)
Q Consensus 83 ~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~----~~~~~~~~~~~GilGLg~~~~------s~~~ql~~~- 151 (359)
+.|++|+ +.|.++.|+|+|+ ++.++ +.||+++. ..+ -.....+||||||++.. +++.+|.+.
T Consensus 198 i~YgdGs-~~G~~~~Dtv~ig----g~~v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGLg~~~~s~~~~~~~~~~L~~qg 270 (451)
T 3qvc_A 198 LTSKAGT-ISGIFSKDLVTIG----KLSVP-YKFIEMTEIVGFEPF-YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQN 270 (451)
T ss_dssp EECSSEE-EEEEEEEEEEEET----TEEEE-EEEEEEEEEEECTTH-HHHSCCCEEEECSSBCSSSSCCCCHHHHHHHTT
T ss_pred EEECCCE-EEEEEEEEEEEEC----CEEEE-EEEEEEEeccccCCC-ccCCCCCEEEecCCCcccccCCCCHHHHHHHcC
Confidence 9999998 9999999999999 47888 99999988 544 11236799999999764 456666543
Q ss_pred --CCCceEEeccccCCCCCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCccccccCCCC
Q 045061 152 --AQGLFSYCLVYAYREMEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFALRRNGTG 228 (359)
Q Consensus 152 --~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~ 228 (359)
.+++||+||.+.. ...|.|+|||+|. .+.+++.|+|+.. ..+|.|.++ |+|++. .. . ..
T Consensus 271 ~I~~~~FS~~L~~~~---~~~G~l~fGgiD~s~y~G~l~~~pv~~--~~~w~v~l~-I~Vgg~-~~--~---------~~ 332 (451)
T 3qvc_A 271 KIEQAVYSIYLPPEN---KNKGYLTIGGIEERFFDGPLNYEKLNH--DLMWQVDLD-VHFGNV-SS--K---------KA 332 (451)
T ss_dssp SSSSSEEEEECCTTC---TTEEEEEESSCCGGGEEEEEEEEECSS--TTSSEEEEE-EEETTE-EE--E---------EE
T ss_pred CCCCCEEEEEEcCCC---CCCCEEEECCcchhhcCCceEEEEccc--CCeeEEEEE-EEECCc-cC--C---------Cc
Confidence 5789999999864 5689999999994 5889999999997 789999999 999988 11 1 14
Q ss_pred cEEEecCCcccccCchHHHHHHHHHHHHhhccCccccCCCccccccceecccCccccceEEEEEcCcEEEEcCCceEEEE
Q 045061 229 GCMIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNASEDWEYCYRYDSRFRAYASMTFHFDRADFKVEPTYMYFIF 308 (359)
Q Consensus 229 ~~iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~l~~~f~g~~~~i~~~~y~~~~ 308 (359)
.+++||||+++++|++++++|.+++++... .....+.++|+ .. .+|+|+|.|+|+.++|+|++|+...
T Consensus 333 ~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~-------~~~g~y~v~C~-~~----~~P~itf~fgg~~i~lp~~~yi~~~ 400 (451)
T 3qvc_A 333 NVILDSATSVITVPTEFFNQFVESASVFKV-------PFLSLYVTTCG-NT----KLPTLEYRSPNKVYTLEPKQYLEPL 400 (451)
T ss_dssp EEEECTTBSSEEECHHHHHHHHTTTTCEEC-------TTSSCEEEETT-CT----TCCCEEEEETTEEEEECHHHHEEEC
T ss_pred eEEEeCCCccccCCHHHHHHHHHHcCCeec-------CCCCeEEeeCC-cC----cCCcEEEEECCEEEEEcHHHheeec
Confidence 799999999999999999999998855421 12355778998 43 8999999999999999999999986
Q ss_pred cC-CCeEEEE-EEcCC---CceeecccceeeeEEEEECCCCEEEEeeCC
Q 045061 309 QN-EGYFCVA-ISFSD---RNSVVGAWQQQDTRFVYDLNTGTIQFVPEN 352 (359)
Q Consensus 309 ~~-~~~~C~~-~~~~~---~~~iLG~~fl~~~y~vfD~~~~~igfa~~~ 352 (359)
.. ++..|+. +...+ +.||||.+|||++|+|||++++|||||+++
T Consensus 401 ~~~~~~~C~~~i~~~~~~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 401 ENIFSALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp TTTSTTEEEECEEECCCSTTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred ccCCCCeEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 53 3478974 55543 579999999999999999999999999975
No 28
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=1.7e-54 Score=415.71 Aligned_cols=311 Identities=18% Similarity=0.251 Sum_probs=250.5
Q ss_pred CcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCC---CCCCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCCc
Q 045061 3 KNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCV---NCFNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQC 79 (359)
Q Consensus 3 ~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~---~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~~ 79 (359)
.+++|+++|.||||||++.|+|||||+++||++..|. .| ..++.|+|++|+||+..+ +
T Consensus 50 ~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C--~~~~~y~~~~SsT~~~~~-----------------~ 110 (478)
T 1qdm_A 50 MNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIAC--YLHSRYKAGASSTYKKNG-----------------K 110 (478)
T ss_dssp GGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGG--GGSCCBCGGGCTTCBCCC-----------------C
T ss_pred cCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCccc--cCCCCCCcccCCCeeeCC-----------------c
Confidence 4689999999999999999999999999999999995 45 457899999999999877 7
Q ss_pred eEEEEeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeCCCCCCC-CCCcceEEecCCCCCch------HHhhhhc-
Q 045061 80 VHRINYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSNDNRDFSF-DGNIAGILGFSVSPFSL------LGQLKST- 151 (359)
Q Consensus 80 ~~~~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~~~~~~~-~~~~~GilGLg~~~~s~------~~ql~~~- 151 (359)
.|.+.|++|+ +.|.+++|+|+|+ ++.++++.||+++...+..+ ...++||||||++..++ +.+|.+.
T Consensus 111 ~~~i~Yg~Gs-~~G~~~~Dtv~ig----~~~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~p~~~~l~~qg 185 (478)
T 1qdm_A 111 PAAIQYGTGS-IAGYFSEDSVTVG----DLVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPVWYKMIEQG 185 (478)
T ss_dssp EEEEEETTEE-EEEEEEEEEEEET----TEEEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGGGCCCHHHHHTTTT
T ss_pred EEEEEcCCCC-eEEEEEEEEEEEC----CeEECCEEEEEEEecCCcccccccccceecccccccccCCCCcHHHHHHHCC
Confidence 8999999998 8999999999999 47889999999998765122 24789999999987663 3444432
Q ss_pred --CCCceEEeccccCCCCCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCccccccCCCC
Q 045061 152 --AQGLFSYCLVYAYREMEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFALRRNGTG 228 (359)
Q Consensus 152 --~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~ 228 (359)
.+++||+||.+.. +....|.|+|||+|. .+.+++.|+|+.. ..+|.|.+++|.|+++.+.+... ..
T Consensus 186 ~i~~~~FS~~L~~~~-~~~~~G~l~fGg~d~~~~~G~l~~~pv~~--~~~w~v~l~~i~v~g~~~~~~~~--------~~ 254 (478)
T 1qdm_A 186 LVSDPVFSFWLNRHV-DEGEGGEIIFGGMDPKHYVGEHTYVPVTQ--KGYWQFDMGDVLVGGKSTGFCAG--------GC 254 (478)
T ss_dssp CCSSSEEEEECCCC------CEEEEETCCCTTSEEEEEEEEEEEE--ETTEEEEECCEEETTEECSTTTT--------CE
T ss_pred CCCCCEEEEEeecCC-CCCCCeEEEeCCcCHhhcCCCceEEeccC--CCeEEEEEeEEEECCEEEeecCC--------Cc
Confidence 4789999998742 124589999999995 5789999999998 78999999999999987654322 25
Q ss_pred cEEEecCCcccccCchHHHHHHHHHHHHhh----------------------------------cc--------------
Q 045061 229 GCMIDTGAIATFIQRGPYEVVMRHFDEHFT----------------------------------SF-------------- 260 (359)
Q Consensus 229 ~~iiDtGt~~~~lp~~~~~~l~~~~~~~~~----------------------------------~~-------------- 260 (359)
.+|+||||+++++|++++++|.+++.+... ..
T Consensus 255 ~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~~~~~~~ 334 (478)
T 1qdm_A 255 AAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRS 334 (478)
T ss_dssp EEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC--------------
T ss_pred eEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCccccccccccc
Confidence 799999999999999999999988854210 00
Q ss_pred ------------------------------------------------CccccCCCccccccceecccCccccceEEEEE
Q 045061 261 ------------------------------------------------GRQRMHNASEDWEYCYRYDSRFRAYASMTFHF 292 (359)
Q Consensus 261 ------------------------------------------------~~~~~~~~~~~~~~C~~~~~~~~~~p~l~~~f 292 (359)
+.........+.++|.... .+|+|+|.|
T Consensus 335 v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~~----~lP~i~f~~ 410 (478)
T 1qdm_A 335 VVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLG----SMPDIEFTI 410 (478)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGGT----TCCCEEEEE
T ss_pred cccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeeccccc----ccccEEEEE
Confidence 0000112345678898765 899999999
Q ss_pred cCcEEEEcCCceEEEEcCC-CeEEEE-EEcC------CCceeecccceeeeEEEEECCCCEEEEeeCC
Q 045061 293 DRADFKVEPTYMYFIFQNE-GYFCVA-ISFS------DRNSVVGAWQQQDTRFVYDLNTGTIQFVPEN 352 (359)
Q Consensus 293 ~g~~~~i~~~~y~~~~~~~-~~~C~~-~~~~------~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~ 352 (359)
+|+.++|+|++|++....+ ...|++ |... ++.||||+.|||++|+|||++++|||||++.
T Consensus 411 gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a~ 478 (478)
T 1qdm_A 411 GGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 478 (478)
T ss_dssp TTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeCC
Confidence 9999999999999986532 468985 5432 2579999999999999999999999999863
No 29
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=5.1e-53 Score=398.86 Aligned_cols=317 Identities=16% Similarity=0.206 Sum_probs=248.8
Q ss_pred cceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCCceEEE
Q 045061 4 NYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCVNCFNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQCVHRI 83 (359)
Q Consensus 4 ~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~~~~~~ 83 (359)
+..|+++|.||||||++.|+|||||+++||++..|..| ++.|+|++|+||+... |.|.+
T Consensus 20 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~----~~~y~~~~SsT~~~~~-----------------~~~~i 78 (395)
T 2qp8_A 20 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFL----HRYYQRQLSSTYRDLR-----------------KGVYV 78 (395)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTC----SCCCCGGGCTTCEEEE-----------------EEEEE
T ss_pred CceEEEEEEecCCCceEEEEEecCCCceEEECCCCccc----cCCcCcccCCCceeCC-----------------ceEEE
Confidence 56899999999999999999999999999999888653 6789999999999988 79999
Q ss_pred EeCCCCeEEEEEEEEEEEEecCCceeecC-ceEEEceeCCCCCCCC--CCcceEEecCCCCCc--------hHHhhhhc-
Q 045061 84 NYAGGASASGLVSTETFTFHLKNKLVCVP-GVIFGCSNDNRDFSFD--GNIAGILGFSVSPFS--------LLGQLKST- 151 (359)
Q Consensus 84 ~y~~g~~~~G~~~~D~v~i~~~~~~~~~~-~~~fg~~~~~~~~~~~--~~~~GilGLg~~~~s--------~~~ql~~~- 151 (359)
.|++|+ +.|.+++|+|+|+.. ..++ .+.|++...... .+. ...+||||||++..+ ++.+|.+.
T Consensus 79 ~Yg~Gs-~~G~~~~Dtv~ig~g---~~~~~~~~~~~~~~~~~-~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q~ 153 (395)
T 2qp8_A 79 PYTQGK-WEGELGTDLVSIPHG---PNVTVRANIAAITESDK-FFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQT 153 (395)
T ss_dssp ECSSCE-EEEEEEEEEEECTTS---CSCEEEEEEEEEEEEES-CSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHS
T ss_pred EECCcE-EEEEEEeEEEEECCC---CCceEEEEEEEEEccCc-ccccccCccceEEcCchhhccCCCCCCCHHHHHHHcc
Confidence 999998 699999999999831 1222 256776654433 222 378999999997643 44555443
Q ss_pred -CCCceEEeccccCC-------CCCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCcccc
Q 045061 152 -AQGLFSYCLVYAYR-------EMEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFAL 222 (359)
Q Consensus 152 -~~~~fs~~l~~~~~-------~~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~ 222 (359)
.+++||+||.+..- .....|.|+|||+|. ++.+++.|+|+.. ..+|.|.+++|+|+++.+.++...+.
T Consensus 154 ~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~~~v~l~~i~v~g~~~~~~~~~~~- 230 (395)
T 2qp8_A 154 HVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR--EWYYEVIIVRVEINGQDLKMDCKEYN- 230 (395)
T ss_dssp CCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCS--BTTBBCCEEEEEETTEECCCCGGGGG-
T ss_pred CCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCC--CceEEEEEEEEEECCEEcccCccccC-
Confidence 34799999976310 014679999999994 5889999999988 68999999999999998765443221
Q ss_pred ccCCCCcEEEecCCcccccCchHHHHHHHHHHHHhhccCccccCCC-ccccccceecccC-ccccceEEEEEcCc-----
Q 045061 223 RRNGTGGCMIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNA-SEDWEYCYRYDSR-FRAYASMTFHFDRA----- 295 (359)
Q Consensus 223 ~~~~~~~~iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~C~~~~~~-~~~~p~l~~~f~g~----- 295 (359)
...+||||||++++||++++++|.+++.+......+ .... ..+.++|+..... ...+|+|+|.|+|.
T Consensus 231 ----~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~--~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~ 304 (395)
T 2qp8_A 231 ----YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKF--PDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQS 304 (395)
T ss_dssp ----SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCC--CHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEE
T ss_pred ----CceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccC--CccccccccccccccccchHhhCCcEEEEEccCCCCce
Confidence 247999999999999999999999999887543210 0000 1235799875422 34699999999975
Q ss_pred -EEEEcCCceEEEEcC---CCeEEE--EEEcCCCceeecccceeeeEEEEECCCCEEEEeeCCCCC
Q 045061 296 -DFKVEPTYMYFIFQN---EGYFCV--AISFSDRNSVVGAWQQQDTRFVYDLNTGTIQFVPENCAN 355 (359)
Q Consensus 296 -~~~i~~~~y~~~~~~---~~~~C~--~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~c~~ 355 (359)
.++|+|++|+..... ....|+ ++...++.||||.+|||++|+|||++++|||||+++|..
T Consensus 305 ~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 370 (395)
T 2qp8_A 305 FRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHV 370 (395)
T ss_dssp EEEEECHHHHEEEECCTTCCSCEEEEECEEEESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCC
T ss_pred EEEEECHHHhEeecccCCCCCceEEEEEecCCCCcEEEChHHhCCeeEEEECCCCEEEEEeccCCC
Confidence 699999999998653 235896 455555789999999999999999999999999999985
No 30
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=9.9e-53 Score=397.92 Aligned_cols=318 Identities=16% Similarity=0.204 Sum_probs=249.1
Q ss_pred cceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCCceEEE
Q 045061 4 NYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCVNCFNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQCVHRI 83 (359)
Q Consensus 4 ~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~~~~~~ 83 (359)
+..|+++|.||||||+++|+|||||+++||++..| | ..++.|+|++|+||+... |.|.+
T Consensus 27 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~--~~~~~y~~~~SsT~~~~~-----------------~~~~i 85 (402)
T 3vf3_A 27 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--P--FLHRYYQRQLSSTYRDLR-----------------KGVYV 85 (402)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--T--TCSCCCCGGGCTTCEEEE-----------------EEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--C--cccCCcCcccCcccccCC-----------------CEEEE
Confidence 45899999999999999999999999999999887 3 467899999999999988 79999
Q ss_pred EeCCCCeEEEEEEEEEEEEecCCceeecC-ceEEEceeCCCCCCCC--CCcceEEecCCCCC--------chHHhhhhc-
Q 045061 84 NYAGGASASGLVSTETFTFHLKNKLVCVP-GVIFGCSNDNRDFSFD--GNIAGILGFSVSPF--------SLLGQLKST- 151 (359)
Q Consensus 84 ~y~~g~~~~G~~~~D~v~i~~~~~~~~~~-~~~fg~~~~~~~~~~~--~~~~GilGLg~~~~--------s~~~ql~~~- 151 (359)
.|++|+ +.|.+++|+|+|++. ..++ .+.|+++..... .+. ...+||||||++.. +++.+|.+.
T Consensus 86 ~Yg~Gs-~~G~~~~D~v~ig~~---~~~~~~~~~~~~~~~~~-~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~ 160 (402)
T 3vf3_A 86 PYTQGK-WEGELGTDLVSIPHG---PNVTVRANIAAITESDK-FFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQT 160 (402)
T ss_dssp ECSSCE-EEEEEEEEEEECTTS---CSCEEEEEEEEEEEEES-CSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHS
T ss_pred EECcEE-EEEEEEEEEEEECCc---cccceeeeEEEEEcccc-ccccCCCccceEEcCchhhcccCCcCCcHHHHHHHcc
Confidence 999998 799999999999842 2222 244676665544 322 37899999998754 455666543
Q ss_pred -CCCceEEeccccC--CC-----CCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCcccc
Q 045061 152 -AQGLFSYCLVYAY--RE-----MEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFAL 222 (359)
Q Consensus 152 -~~~~fs~~l~~~~--~~-----~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~ 222 (359)
..++||+||.+.. ++ ....|.|+|||+|. ++.+++.|+|+.. ..+|.|.+++|+|+++.+.++...+
T Consensus 161 ~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~w~v~l~~i~v~g~~~~~~~~~~-- 236 (402)
T 3vf3_A 161 HVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR--EWYYEVIIVRVEINGQDLKMDCKEY-- 236 (402)
T ss_dssp CCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSS--BTTBEECEEEEEETTEECCCCGGGG--
T ss_pred CCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCc--CcEEEEEEeEEEECCEEeccccccc--
Confidence 3489999997531 11 35689999999994 5889999999998 7899999999999999876543321
Q ss_pred ccCCCCcEEEecCCcccccCchHHHHHHHHHHHHhhccCccccCCC-ccccccceecccC-ccccceEEEEEcCc-----
Q 045061 223 RRNGTGGCMIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNA-SEDWEYCYRYDSR-FRAYASMTFHFDRA----- 295 (359)
Q Consensus 223 ~~~~~~~~iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~C~~~~~~-~~~~p~l~~~f~g~----- 295 (359)
....+||||||++++||++++++|.+++.+....... .... ..+.++|+..... ...+|+|+|.|+|.
T Consensus 237 ---~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~--~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~ 311 (402)
T 3vf3_A 237 ---NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKF--PDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQS 311 (402)
T ss_dssp ---GSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCC--CTTGGGTCSCEEEETTCCCGGGSCCEEEEEECSSTTEE
T ss_pred ---CCCeEEEECCCCcccCCHHHHHHHHHHHhhhcccccc--CccccccccccccccccchHhhCCceEEEEecCCCCce
Confidence 1247999999999999999999999999988542210 1111 2246899976422 23699999999985
Q ss_pred -EEEEcCCceEEEEcCC---CeEEEE--EEcCCCceeecccceeeeEEEEECCCCEEEEeeCCCCCc
Q 045061 296 -DFKVEPTYMYFIFQNE---GYFCVA--ISFSDRNSVVGAWQQQDTRFVYDLNTGTIQFVPENCAND 356 (359)
Q Consensus 296 -~~~i~~~~y~~~~~~~---~~~C~~--~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~c~~~ 356 (359)
.++|+|++|+...... ...|++ +....+.||||.+|||++|+|||++++|||||+++|+..
T Consensus 312 ~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~ 378 (402)
T 3vf3_A 312 FRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVH 378 (402)
T ss_dssp EEEEECHHHHEEECCCGGGTTEEEEEECEEEESSCEEECHHHHTTEEEEEEGGGTEEEEEEETTCCB
T ss_pred EEEEECHHHheehhccCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEEECCCCEEEEEecccCcc
Confidence 4999999999976532 258986 334447899999999999999999999999999999853
No 31
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=8e-53 Score=389.89 Aligned_cols=294 Identities=18% Similarity=0.200 Sum_probs=240.6
Q ss_pred cceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCCceEEE
Q 045061 4 NYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCVNCFNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQCVHRI 83 (359)
Q Consensus 4 ~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~~~~~~ 83 (359)
+..|+++|.||||||++.|+|||||+++||+|. +.|+|++|+++.. |.|.+
T Consensus 11 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~----------~~y~~s~Ss~~~~-------------------~~~~i 61 (340)
T 1wkr_A 11 LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD----------KSYVKTSTSSATS-------------------DKVSV 61 (340)
T ss_dssp SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS----------SCCCCCTTCEEEE-------------------EEEEE
T ss_pred CcEEEEEEEECCCCcEEEEEEeCCChhheecCC----------CccCCcCCccccC-------------------ceEEE
Confidence 568999999999999999999999999999752 4799998886544 78999
Q ss_pred EeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeCCCCCCCCCCcceEEecCCCCCc--------------hHHhhh
Q 045061 84 NYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSNDNRDFSFDGNIAGILGFSVSPFS--------------LLGQLK 149 (359)
Q Consensus 84 ~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~GilGLg~~~~s--------------~~~ql~ 149 (359)
.|++|+ +.|.+++|+|+|+ ++.++++.||+++...+ +...+||||||++..+ ++.+|.
T Consensus 62 ~Yg~Gs-~~G~~~~Dtv~~g----~~~v~~~~fg~~~~~~~---~~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~~~l~ 133 (340)
T 1wkr_A 62 TYGSGS-FSGTEYTDTVTLG----SLTIPKQSIGVASRDSG---FDGVDGILGVGPVDLTVGTLSPHTSTSIPTVTDNLF 133 (340)
T ss_dssp ECSSCE-EEEEEEEEEEEET----TEEEEEEEEEEEEEEES---CTTCSEEEECSCGGGGTTSEESCTTCCCCCHHHHHH
T ss_pred EECCcE-EEEEEEEEEEEEC----CEEEcceEEEEEEccCC---CcCCCcEEECCccccccccccccccccCCCHHHHHH
Confidence 999998 9999999999998 47899999999998654 3468999999997654 355554
Q ss_pred hc---CCCceEEeccccCCCCCcceeEEECCCCc-cCCCCceeeeeecCC--CCcEEEEEeEEEECC-EEeecCCCcccc
Q 045061 150 ST---AQGLFSYCLVYAYREMEATSILRFGKDAN-IQRKDMKTIRMFVDR--SSHYYLSLQDISVAD-HRIGFAPGTFAL 222 (359)
Q Consensus 150 ~~---~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~--~~~w~v~l~~i~v~~-~~~~~~~~~~~~ 222 (359)
+. .+++||+||.+........|.|+|||+|. ++.+++.|+|+...+ ..+|.|. ++|+|++ +.+...
T Consensus 134 ~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~l~~~------ 206 (340)
T 1wkr_A 134 SQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSSTSILSS------ 206 (340)
T ss_dssp HTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTTEEEEEE------
T ss_pred HcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCCeEccCC------
Confidence 32 47899999987533345689999999994 588999999998743 4689999 9999998 766421
Q ss_pred ccCCCCcEEEecCCcccccCchHHHHHHHHHHHHhhccCccccCCCccccccceecccCccccceEEEEEcCcEEEEcCC
Q 045061 223 RRNGTGGCMIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNASEDWEYCYRYDSRFRAYASMTFHFDRADFKVEPT 302 (359)
Q Consensus 223 ~~~~~~~~iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~l~~~f~g~~~~i~~~ 302 (359)
..+||||||++++||++++++|.+++.+... .....+.++|.... .+|+|+|.|+|+.++|+|+
T Consensus 207 -----~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~-------~~~g~~~~~C~~~~----~~p~i~f~f~g~~~~i~~~ 270 (340)
T 1wkr_A 207 -----TAGIVDTGTTLTLIASDAFAKYKKATGAVAD-------NNTGLLRLTTAQYA----NLQSLFFTIGGQTFELTAN 270 (340)
T ss_dssp -----EEEEECTTBCSEEECHHHHHHHHHHHTCEEC-------TTTSSEEECHHHHH----TCCCEEEEETTEEEEECTG
T ss_pred -----CeEEEeCCcccccCCHHHHHHHHHhhCCEEc-------CCCCeEEeeccccc----cCCcEEEEECCEEEEEcHH
Confidence 3699999999999999999999888765422 12345678998755 8999999999999999999
Q ss_pred ceEEEEcC------CCeEEE-EEEc--C----CCceeecccceeeeEEEEECCCCEEEEeeCCCCCcc
Q 045061 303 YMYFIFQN------EGYFCV-AISF--S----DRNSVVGAWQQQDTRFVYDLNTGTIQFVPENCANDH 357 (359)
Q Consensus 303 ~y~~~~~~------~~~~C~-~~~~--~----~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~c~~~~ 357 (359)
+|+++... ....|+ .+.. . +..||||.+|||++|+|||++++|||||+++|++++
T Consensus 271 ~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~ 338 (340)
T 1wkr_A 271 AQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTTAT 338 (340)
T ss_dssp GGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTTCC
T ss_pred HhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCCCCC
Confidence 99986431 124564 4543 1 136899999999999999999999999999998763
No 32
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=2.6e-52 Score=400.58 Aligned_cols=320 Identities=16% Similarity=0.200 Sum_probs=253.4
Q ss_pred CcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCCceEE
Q 045061 3 KNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCVNCFNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQCVHR 82 (359)
Q Consensus 3 ~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~~~~~ 82 (359)
.+..|+++|.||||||+++|+|||||+++||++..| | ..++.|+|++|+||+... |.|.
T Consensus 72 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c--~~~~~y~~~~SsT~~~~~-----------------~~~~ 130 (455)
T 3lpj_A 72 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--P--FLHRYYQRQLSSTYRDLR-----------------KGVY 130 (455)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--T--TCSCCCCGGGCTTCEEEE-----------------EEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--c--ccCCcccCCCCCCcccCC-----------------ccEE
Confidence 345899999999999999999999999999999887 4 468899999999999988 7999
Q ss_pred EEeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeCCCCCCCC--CCcceEEecCCCCC--------chHHhhhhc-
Q 045061 83 INYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSNDNRDFSFD--GNIAGILGFSVSPF--------SLLGQLKST- 151 (359)
Q Consensus 83 ~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~GilGLg~~~~--------s~~~ql~~~- 151 (359)
+.|++|+ +.|.+++|+|+|++.. .+.+ .+.|+++..... .+. ...+||||||++.. +++.+|.+.
T Consensus 131 i~Yg~Gs-~~G~~~~Dtv~ig~~~-~~~~-~~~~~~~~~~~~-~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~ 206 (455)
T 3lpj_A 131 VPYTQGK-WEGELGTDLVSIPHGP-NVTV-RANIAAITESDK-FFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQT 206 (455)
T ss_dssp EECSSCE-EEEEEEEEEEECTTSC-SCEE-EEEEEEEEEEES-CSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHS
T ss_pred EEeCCeE-EEEEEEEEEEEECCCc-ceee-EEEEEEEEccCc-ccccCCCcceEEEeCccccccccCCCCcHHHHHHHcc
Confidence 9999998 7999999999998421 1222 356787776554 332 47899999998754 355566543
Q ss_pred -CCCceEEeccccCCC-------CCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCcccc
Q 045061 152 -AQGLFSYCLVYAYRE-------MEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFAL 222 (359)
Q Consensus 152 -~~~~fs~~l~~~~~~-------~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~ 222 (359)
..++||+||.+.... ....|.|+|||+|. ++.+++.|+|+.. ..+|.|.+++|.|+++.+.++...+
T Consensus 207 ~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~w~v~l~~i~v~g~~~~~~~~~~-- 282 (455)
T 3lpj_A 207 HVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR--EWYYEVIIVRVEINGQDLKMDCKEY-- 282 (455)
T ss_dssp CCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCS--BTTBBCCEEEEEETTEECCCCGGGG--
T ss_pred CCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCC--CceeEEEEeEEEECCEEcccccccc--
Confidence 347999999864211 24579999999994 5889999999998 7899999999999999876543321
Q ss_pred ccCCCCcEEEecCCcccccCchHHHHHHHHHHHHhhccCccccCCC-ccccccceecccC-ccccceEEEEEcCc-----
Q 045061 223 RRNGTGGCMIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQRMHNA-SEDWEYCYRYDSR-FRAYASMTFHFDRA----- 295 (359)
Q Consensus 223 ~~~~~~~~iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~C~~~~~~-~~~~p~l~~~f~g~----- 295 (359)
....+||||||++++||++++++|.+++.+....... .... ..+.++|+..... ...+|+|+|.|+|.
T Consensus 283 ---~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~--~~~~~~g~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~ 357 (455)
T 3lpj_A 283 ---NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKF--PDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQS 357 (455)
T ss_dssp ---GSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCC--CHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEE
T ss_pred ---CCCeEEEECCCcceeCCHHHHHHHHHHhhhhcccccc--CcccccCcceecccccCCchhcCCcEEEEEcCCCcCce
Confidence 1247999999999999999999999999988542210 0000 2246899986521 23599999999986
Q ss_pred -EEEEcCCceEEEEcCC---CeEEEEE--EcCCCceeecccceeeeEEEEECCCCEEEEeeCCCCCc
Q 045061 296 -DFKVEPTYMYFIFQNE---GYFCVAI--SFSDRNSVVGAWQQQDTRFVYDLNTGTIQFVPENCAND 356 (359)
Q Consensus 296 -~~~i~~~~y~~~~~~~---~~~C~~~--~~~~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~c~~~ 356 (359)
.++|+|++|++..... ...|+++ ....+.||||.+|||++|+|||++++|||||+++|...
T Consensus 358 ~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~ 424 (455)
T 3lpj_A 358 FRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVH 424 (455)
T ss_dssp EEEEECHHHHEEEECCTTCCSCEEEEECEEEESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCC
T ss_pred EEEEECHHHheEeccCCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEEECCCCEEEEEecccccc
Confidence 4999999999987632 2589863 33447899999999999999999999999999999764
No 33
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=2.9e-51 Score=384.81 Aligned_cols=320 Identities=22% Similarity=0.352 Sum_probs=243.7
Q ss_pred CCcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCceeecCCCCCCCC----CCCCCC--
Q 045061 2 EKNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCVNCFNQSAPIFNPNASSTYKRIPCDDLICRR----PPFRCE-- 75 (359)
Q Consensus 2 ~~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~----~~~~c~-- 75 (359)
..+++|+++|.|||| |+|||||+++||+|..|. +++...|.+..|.. ....|.
T Consensus 11 ~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~----------------~~~~~~C~s~~C~~~~~~~~~sc~~~ 69 (381)
T 1t6e_X 11 PATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQ----------------PPAEIPCSSPTCLLANAYPAPGCPAP 69 (381)
T ss_dssp TTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTC----------------CCCCCBTTSHHHHHHHSSCCTTCCCC
T ss_pred CCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCC----------------CCCccCCCCchhccccCCCCCCCCCc
Confidence 467899999999998 999999999999986552 13333444444432 011222
Q ss_pred -------CCCc-eEEEEeCCCCeEEEEEEEEEEEEecCCceeecCce----EEEceeCCCCCCCCCCcceEEecCCCCCc
Q 045061 76 -------NGQC-VHRINYAGGASASGLVSTETFTFHLKNKLVCVPGV----IFGCSNDNRDFSFDGNIAGILGFSVSPFS 143 (359)
Q Consensus 76 -------~~~~-~~~~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~----~fg~~~~~~~~~~~~~~~GilGLg~~~~s 143 (359)
...| .|.+.|++|+.+.|.+++|+|+|+..++.+.++++ .|||++......+....+||||||++..+
T Consensus 70 ~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~~~~~dGIlGLg~~~~s 149 (381)
T 1t6e_X 70 SCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASLPRGSTGVAGLANSGLA 149 (381)
T ss_dssp CC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTSCTTEEEEEECSSSTTS
T ss_pred cCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCCCCCCceEEEeCCCcch
Confidence 2346 59999999997799999999999853222445554 67999876320224689999999999999
Q ss_pred hHHhhhhc--CCCceEEeccccCCCCCcceeEEECCCCcc---CCCCceeeeeecCC-CCcEEEEEeEEEECCEEeecCC
Q 045061 144 LLGQLKST--AQGLFSYCLVYAYREMEATSILRFGKDANI---QRKDMKTIRMFVDR-SSHYYLSLQDISVADHRIGFAP 217 (359)
Q Consensus 144 ~~~ql~~~--~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~~---~~~~i~~~~~~~~~-~~~w~v~l~~i~v~~~~~~~~~ 217 (359)
++.||... .+++||+||.+. ..|.|+|||.|.. +.+++.|+|++..+ ..+|.|.+++|+|+++.+.++.
T Consensus 150 ~~~ql~~~~~~~~~FS~~L~~~-----~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~ 224 (381)
T 1t6e_X 150 LPAQVASAQKVANRFLLCLPTG-----GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPE 224 (381)
T ss_dssp HHHHHHHHHTCCSEEEEECCSS-----SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCT
T ss_pred hHHHHhhhcccCceEEEEeCCC-----CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecCCH
Confidence 99998753 579999999873 5799999998753 67999999999743 2467799999999999887655
Q ss_pred CccccccCCCCcEEEecCCcccccCchHHHHHHHHHHHHhhcc-----CccccCCCccccccceecccCc-----cccce
Q 045061 218 GTFALRRNGTGGCMIDTGAIATFIQRGPYEVVMRHFDEHFTSF-----GRQRMHNASEDWEYCYRYDSRF-----RAYAS 287 (359)
Q Consensus 218 ~~~~~~~~~~~~~iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~C~~~~~~~-----~~~p~ 287 (359)
+.++ .+.+||||||++++||+++|++|.+++.+....+ .+.........+..|+..+... ..+|+
T Consensus 225 ~~~~-----~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~ 299 (381)
T 1t6e_X 225 GALA-----TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVPN 299 (381)
T ss_dssp TCSC-----TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETTEECCCC
T ss_pred HHcc-----CCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCcccccCCcCCe
Confidence 4332 2479999999999999999999999998876421 0101101223458999765321 37899
Q ss_pred EEEEEcC-cEEEEcCCceEEEEcCCCeEEEEEEcCC---------CceeecccceeeeEEEEECCCCEEEEeeCCC
Q 045061 288 MTFHFDR-ADFKVEPTYMYFIFQNEGYFCVAISFSD---------RNSVVGAWQQQDTRFVYDLNTGTIQFVPENC 353 (359)
Q Consensus 288 l~~~f~g-~~~~i~~~~y~~~~~~~~~~C~~~~~~~---------~~~iLG~~fl~~~y~vfD~~~~~igfa~~~c 353 (359)
|+|.|+| +.++|++++|++... ++..|++|...+ +.||||+.|||++|+|||++++|||||+++.
T Consensus 300 i~f~f~gg~~~~l~~~~y~~~~~-~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~~~~ 374 (381)
T 1t6e_X 300 VQLGLDGGSDWTMTGKNSMVDVK-QGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPH 374 (381)
T ss_dssp EEEEETTSCEEEECHHHHEEEEE-TTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECCT
T ss_pred EEEEECCCcEEEeCCCeEEEEcC-CCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEecccC
Confidence 9999985 999999999999865 567999887643 4799999999999999999999999999653
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=1.5e-41 Score=298.33 Aligned_cols=220 Identities=22% Similarity=0.321 Sum_probs=183.9
Q ss_pred CcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCCCC-CCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCCceE
Q 045061 3 KNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCVNC-FNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQCVH 81 (359)
Q Consensus 3 ~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~~c-~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~~~~ 81 (359)
.+++|+++|.||||||++.|+|||||+++||+|..|..+ .|..++.|+|++|+||+..+ |.+
T Consensus 11 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~-----------------~~~ 73 (239)
T 1b5f_A 11 RDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAHSMYESSDSSTYKENG-----------------TFG 73 (239)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTSCCBCGGGCTTCEEEE-----------------EEE
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCCCCCCCccCCCeeeCC-----------------cEE
Confidence 468999999999999999999999999999999999622 12457899999999999987 789
Q ss_pred EEEeCCCCeEEEEEEEEEEEEecCCceeecCceEEEceeCCCCCCC-CCCcceEEecCCCCCc--hHHhhhh---cCCCc
Q 045061 82 RINYAGGASASGLVSTETFTFHLKNKLVCVPGVIFGCSNDNRDFSF-DGNIAGILGFSVSPFS--LLGQLKS---TAQGL 155 (359)
Q Consensus 82 ~~~y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~fg~~~~~~~~~~-~~~~~GilGLg~~~~s--~~~ql~~---~~~~~ 155 (359)
.+.|++|+ +.|.+++|+|+|+ .+.++++.||++.......+ ....+||||||++..+ ++.+|.+ +.+++
T Consensus 74 ~i~Yg~Gs-~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p~~~~l~~qg~i~~~~ 148 (239)
T 1b5f_A 74 AIIYGTGS-ITGFFSQDSVTIG----DLVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVWYNMLNQGLVKERR 148 (239)
T ss_dssp EEECSSCE-EEEEEEEEEEEET----TEEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCCHHHHHHHTTCCSSSE
T ss_pred EEEECCCc-EEEEEEEEEEEEC----CcEEccEEEEEEEeccCccccccCcceEEecCccccccHHHHHHHHCCCCCCCE
Confidence 99999998 8999999999998 47889999999987653112 2478999999999876 3344433 24789
Q ss_pred eEEeccccCCCCCcceeEEECCCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCccccccCCCCcEEEec
Q 045061 156 FSYCLVYAYREMEATSILRFGKDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFALRRNGTGGCMIDT 234 (359)
Q Consensus 156 fs~~l~~~~~~~~~~g~l~~Gg~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDt 234 (359)
||+||.+.. +....|.|+|||+|. ++.+++.|+|+.. ..+|.|.+++|+|+++.+.+... ...+||||
T Consensus 149 FS~~l~~~~-~~~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~~~v~l~~i~v~~~~~~~~~~--------~~~aiiDT 217 (239)
T 1b5f_A 149 FSFWLNRNV-DEEEGGELVFGGLDPNHFRGDHTYVPVTY--QYYWQFGIGDVLIGDKSTGFCAP--------GCQAFADS 217 (239)
T ss_dssp EEEEECCSC-SSSCCEEEEETSCCGGGEEEEEEEEEEEE--ETTEEEEECCEEETTEECCTTTT--------CEEEEECT
T ss_pred EEEEEeCCC-CCCCCeEEEECCcChhhccCceEEEEccc--CCeEEEEeeEEEECCEEecccCC--------CCEEEEec
Confidence 999998742 124689999999994 5788999999998 68999999999999987754332 24799999
Q ss_pred CCcccccCchHHHHHHHHHHH
Q 045061 235 GAIATFIQRGPYEVVMRHFDE 255 (359)
Q Consensus 235 Gt~~~~lp~~~~~~l~~~~~~ 255 (359)
||++++||++++++|.+++++
T Consensus 218 GTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 218 GTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp TCSSEEECHHHHHHHHHHTTC
T ss_pred CcchhhCCHHHHHHHHHHhCC
Confidence 999999999999999998753
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=1.6e-37 Score=273.53 Aligned_cols=220 Identities=15% Similarity=0.181 Sum_probs=179.0
Q ss_pred eeecCceEEEceeCCCCCCCC--CCcceEEecCCCCCc------hHHhhhhc---CCCceEEeccccCCCCCcceeEEEC
Q 045061 108 LVCVPGVIFGCSNDNRDFSFD--GNIAGILGFSVSPFS------LLGQLKST---AQGLFSYCLVYAYREMEATSILRFG 176 (359)
Q Consensus 108 ~~~~~~~~fg~~~~~~~~~~~--~~~~GilGLg~~~~s------~~~ql~~~---~~~~fs~~l~~~~~~~~~~g~l~~G 176 (359)
+++++++.||+++...+ ..+ ...+||||||++..+ ++.+|.+. .+++||+||.+... ....|.|+||
T Consensus 2 g~~v~~~~Fg~~~~~~~-~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~-~~~~G~l~fG 79 (241)
T 1lya_B 2 GVKVERQVFGEATKQPG-ITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPD-AQPGGELMLG 79 (241)
T ss_dssp CEEEEEEEEEEEEECCS-STTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTT-CSSCEEEEET
T ss_pred CeEECCeEEEEEEEccC-CccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCC-CCCCcEEEEC
Confidence 57889999999998865 323 378999999998654 45666543 57999999988531 1237999999
Q ss_pred CCCc-cCCCCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCccccccCCCCcEEEecCCcccccCchHHHHHHHHHHH
Q 045061 177 KDAN-IQRKDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFALRRNGTGGCMIDTGAIATFIQRGPYEVVMRHFDE 255 (359)
Q Consensus 177 g~d~-~~~~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDtGt~~~~lp~~~~~~l~~~~~~ 255 (359)
|+|. ++.+++.|+|+.. ..+|.|.+++|+|+++.+... ....+|+||||+++++|++++++|.+++.+
T Consensus 80 g~d~~~~~g~l~~~p~~~--~~~~~v~l~~i~v~~~~~~~~---------~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~ 148 (241)
T 1lya_B 80 GTDSKYYKGSLSYLNVTR--KAYWQVHLDQVEVASGLTLCK---------EGCEAIVDTGTSLMVGPVDEVRELQKAIGA 148 (241)
T ss_dssp SCCGGGEEEEEEEEECSS--BTTBEEEEEEEEETTSCEEST---------TCEEEEECTTCSSEEECHHHHHHHHHHHTC
T ss_pred CcCHHHcCCceEEEECcc--ccEEEEEEeEEEECCeeEecc---------CCCEEEEECCCccccCCHHHHHHHHHHhCC
Confidence 9995 5889999999997 789999999999998764211 124799999999999999999999999854
Q ss_pred HhhccCccccCCCccccccceecccCccccceEEEEEcCcEEEEcCCceEEEEcCC-CeEEEE-EEcC------CCceee
Q 045061 256 HFTSFGRQRMHNASEDWEYCYRYDSRFRAYASMTFHFDRADFKVEPTYMYFIFQNE-GYFCVA-ISFS------DRNSVV 327 (359)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~l~~~f~g~~~~i~~~~y~~~~~~~-~~~C~~-~~~~------~~~~iL 327 (359)
... ....+.++|+... .+|+|+|.|+|+.++|+|++|++..... +..|+. +... .+.|||
T Consensus 149 ~~~--------~~g~~~~~C~~~~----~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~il 216 (241)
T 1lya_B 149 VPL--------IQGEYMIPCEKVS----TLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWIL 216 (241)
T ss_dssp EEE--------ETTEEEEEGGGGG----GSCCEEEEETTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEE
T ss_pred eec--------cCCcEEEECCCCc----cCCeEEEEECCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEe
Confidence 321 1245678999765 8999999999999999999999987532 468985 6643 368999
Q ss_pred cccceeeeEEEEECCCCEEEEeeCC
Q 045061 328 GAWQQQDTRFVYDLNTGTIQFVPEN 352 (359)
Q Consensus 328 G~~fl~~~y~vfD~~~~~igfa~~~ 352 (359)
|.+|||++|+|||++++|||||+++
T Consensus 217 G~~fl~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 217 GDVFIGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp CHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred chHHhcceEEEEECCCCEEEEEEcC
Confidence 9999999999999999999999874
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.87 E-value=2.7e-22 Score=149.41 Aligned_cols=82 Identities=29% Similarity=0.506 Sum_probs=75.9
Q ss_pred CcceEEEEEEeCCCCcEEEEEEEcCCCceeEeCCCCC----CCCCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCC
Q 045061 3 KNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCLPCV----NCFNQSAPIFNPNASSTYKRIPCDDLICRRPPFRCENGQ 78 (359)
Q Consensus 3 ~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c~----~c~~~~~~~y~~~~Sst~~~~~~~~~~c~~~~~~c~~~~ 78 (359)
.++.|+++|.||||||++.|+|||||+++||++..|. .| ..++.|+|++|+|++..+
T Consensus 11 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C--~~~~~y~p~~SsT~~~~~----------------- 71 (97)
T 1lya_A 11 MDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIAC--WIHHKYNSDKSSTYVKNG----------------- 71 (97)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHH--HTSCCBCGGGCTTCEEEE-----------------
T ss_pred CCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCccccc--CCCCCCCchhCCCceeCC-----------------
Confidence 5789999999999999999999999999999999996 45 357899999999999988
Q ss_pred ceEEEEeCCCCeEEEEEEEEEEEEec
Q 045061 79 CVHRINYAGGASASGLVSTETFTFHL 104 (359)
Q Consensus 79 ~~~~~~y~~g~~~~G~~~~D~v~i~~ 104 (359)
|.|.+.|++|+ +.|.++.|+|+|++
T Consensus 72 ~~~~i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 72 TSFDIHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp EEEEEECSSCE-EEEEEEEEEEEESC
T ss_pred CcEEEEECCcE-EEEEEEEEEEEECC
Confidence 79999999999 99999999999984
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.72 E-value=6.5e-18 Score=123.54 Aligned_cols=79 Identities=13% Similarity=0.207 Sum_probs=67.4
Q ss_pred cccccceecccCccccceEEEEEcCcEEEEcCCceEEEEcCC-CeEEEE-EEcC-----CCceeecccceeeeEEEEECC
Q 045061 270 EDWEYCYRYDSRFRAYASMTFHFDRADFKVEPTYMYFIFQNE-GYFCVA-ISFS-----DRNSVVGAWQQQDTRFVYDLN 342 (359)
Q Consensus 270 ~~~~~C~~~~~~~~~~p~l~~~f~g~~~~i~~~~y~~~~~~~-~~~C~~-~~~~-----~~~~iLG~~fl~~~y~vfD~~ 342 (359)
.|.++|...+ ++|+|+|.|+|+.++|+|++|+...... ...|++ +... .+.||||+.|||++|+|||.+
T Consensus 2 ~y~v~C~~~~----~~P~i~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~ 77 (87)
T 1b5f_B 2 ELQVDCNTLS----SMPNVSFTIGGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYG 77 (87)
T ss_dssp CCEECGGGGG----GCCCEEEEETTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETT
T ss_pred cEEEECCCCC----cCCcEEEEECCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECC
Confidence 4678998765 8999999999999999999999986532 468985 6542 257999999999999999999
Q ss_pred CCEEEEeeCC
Q 045061 343 TGTIQFVPEN 352 (359)
Q Consensus 343 ~~~igfa~~~ 352 (359)
++|||||+++
T Consensus 78 ~~riGfA~~~ 87 (87)
T 1b5f_B 78 NLLVGFAEAA 87 (87)
T ss_dssp TTEEEEEEEC
T ss_pred CCEEEEEEcC
Confidence 9999999864
No 38
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=96.38 E-value=0.006 Score=48.17 Aligned_cols=103 Identities=12% Similarity=0.101 Sum_probs=59.0
Q ss_pred cEEEecCCcccccCchHHHHHHHHHHHHhhccCcc-ccCCCccccccceecccCccccceEEEEEcCcEEEEcCCceEEE
Q 045061 229 GCMIDTGAIATFIQRGPYEVVMRHFDEHFTSFGRQ-RMHNASEDWEYCYRYDSRFRAYASMTFHFDRADFKVEPTYMYFI 307 (359)
Q Consensus 229 ~~iiDtGt~~~~lp~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~C~~~~~~~~~~p~l~~~f~g~~~~i~~~~y~~~ 307 (359)
.+++|||++.+.++++..+++- +....... .. ... ......+.. ..+...+++++..+.
T Consensus 37 ~~LVDTGAs~s~Is~~~A~rlG--L~~~~~~~-~~~~a~--g~G~~~~~g------~v~~~~I~Ig~~~~~--------- 96 (148)
T 3s8i_A 37 KAFVDSGAQMTIMSQACAERCN--IMRLVDRR-WAGVAK--GVGTQRIIG------RVHLAQIQIEGDFLQ--------- 96 (148)
T ss_dssp EEEECTTCSSCEEEHHHHHHTT--CGGGEEGG-GCEECC--C---CEEEE------EEEEEEEEETTEEEE---------
T ss_pred EEEEeCCCCcEeeCHHHHHHcC--CccccCcc-eeEEEE--cCCccEEEE------EEEEEEEEECCEEEE---------
Confidence 5999999999999998887751 11000000 00 000 001111111 234445555554321
Q ss_pred EcCCCeEE-EEEEcCC-CceeecccceeeeEEEEECCCCEEEEeeCCCCCccCC
Q 045061 308 FQNEGYFC-VAISFSD-RNSVVGAWQQQDTRFVYDLNTGTIQFVPENCANDHFL 359 (359)
Q Consensus 308 ~~~~~~~C-~~~~~~~-~~~iLG~~fl~~~y~vfD~~~~~igfa~~~c~~~~~~ 359 (359)
| +.+.+.. -..|||..||+.+-.+.|++++++-|.... ...+||
T Consensus 97 -------~~~~Vle~~~~d~LLGmD~L~~~~~~ID~~~~~L~l~~~~-~~~pfl 142 (148)
T 3s8i_A 97 -------CSFSILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVIGTTG-TQTYFL 142 (148)
T ss_dssp -------EEEEEETTCSSSEEECHHHHHHTTCEEETTTTEEECTTTC-CEEECC
T ss_pred -------EEEEEeCCCCcCeeccHHHHHhCCEEEEcCCCEEEEccCC-eEEeec
Confidence 2 1222322 357999999999999999999999997654 444443
No 39
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=95.17 E-value=0.046 Score=42.99 Aligned_cols=27 Identities=11% Similarity=0.171 Sum_probs=24.8
Q ss_pred ceeecccceeeeEEEEECCCCEEEEee
Q 045061 324 NSVVGAWQQQDTRFVYDLNTGTIQFVP 350 (359)
Q Consensus 324 ~~iLG~~fl~~~y~vfD~~~~~igfa~ 350 (359)
..|||..||+++-+++|+.+++|-|..
T Consensus 109 d~iLG~d~L~~~~~~ID~~~~~l~l~~ 135 (148)
T 2i1a_A 109 DVLIGLDMLKRHLACVDLKENVLRIAE 135 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEEETT
T ss_pred CeEecHHHHhhCCEEEECCCCEEEEcc
Confidence 579999999999999999999999864
No 40
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=86.55 E-value=0.98 Score=32.58 Aligned_cols=27 Identities=22% Similarity=0.239 Sum_probs=23.8
Q ss_pred EEEEEeCCCCcEEEEEEEcCCCceeEeCC
Q 045061 8 TVDVLFGTPSKSEFLLFDTGSYLIWTQCL 36 (359)
Q Consensus 8 ~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~ 36 (359)
++.+.|| .|.+.+++|||..+|.+...
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~ 36 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEM 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCC
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEecc
Confidence 5678999 89999999999999999654
No 41
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=85.87 E-value=0.7 Score=36.00 Aligned_cols=30 Identities=10% Similarity=0.057 Sum_probs=26.2
Q ss_pred cceEEEEEEeCCCCcEEEEEEEcCCCceeEeC
Q 045061 4 NYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQC 35 (359)
Q Consensus 4 ~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~ 35 (359)
.+.+++++.|+ .+++++++|||++.+.+..
T Consensus 24 ~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 24 VPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred cceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 46688999998 7899999999999998854
No 42
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=85.36 E-value=0.91 Score=33.10 Aligned_cols=25 Identities=28% Similarity=0.209 Sum_probs=23.0
Q ss_pred EEEEEeCCCCcEEEEEEEcCCCceeEe
Q 045061 8 TVDVLFGTPSKSEFLLFDTGSYLIWTQ 34 (359)
Q Consensus 8 ~~~i~iGtp~Q~~~l~~DTgS~~~wv~ 34 (359)
++.+.|| .|.+.+++|||...|.+.
T Consensus 10 ~v~v~I~--Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 10 TTIVLIN--DTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEc
Confidence 5789999 899999999999999996
No 43
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=84.24 E-value=1.4 Score=31.70 Aligned_cols=28 Identities=18% Similarity=0.152 Sum_probs=24.1
Q ss_pred EEEEEeCCCCcEEEEEEEcCCCceeEeCCC
Q 045061 8 TVDVLFGTPSKSEFLLFDTGSYLIWTQCLP 37 (359)
Q Consensus 8 ~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~ 37 (359)
++.+.|| .|.+.+++|||..+|.+....
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~~ 37 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGIE 37 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSCC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCcc
Confidence 5678999 899999999999999996433
No 44
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=81.91 E-value=1.2 Score=32.85 Aligned_cols=31 Identities=16% Similarity=0.126 Sum_probs=25.6
Q ss_pred EEEEEeC---CCCcEEEEEEEcCCCceeEeCCCC
Q 045061 8 TVDVLFG---TPSKSEFLLFDTGSYLIWTQCLPC 38 (359)
Q Consensus 8 ~~~i~iG---tp~Q~~~l~~DTgS~~~wv~~~~c 38 (359)
.+.|.|| +|+|.+..++|||..+|.+....+
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 4556666 889999999999999999986554
No 45
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=77.92 E-value=1.9 Score=33.61 Aligned_cols=31 Identities=6% Similarity=0.046 Sum_probs=26.6
Q ss_pred cceEEEEEEeCCCCcEEEEEEEcCCCceeEeCC
Q 045061 4 NYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQCL 36 (359)
Q Consensus 4 ~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~ 36 (359)
...|++++.|. .+++++++|||++.+.+...
T Consensus 22 ~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 22 VTMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred cCEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 34688899998 89999999999999999653
No 46
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=77.15 E-value=2.4 Score=31.50 Aligned_cols=25 Identities=16% Similarity=0.220 Sum_probs=22.2
Q ss_pred EEEEEeCCCCcEEEEEEEcCCCceeEeC
Q 045061 8 TVDVLFGTPSKSEFLLFDTGSYLIWTQC 35 (359)
Q Consensus 8 ~~~i~iGtp~Q~~~l~~DTgS~~~wv~~ 35 (359)
++ |.|| .|.+.+++|||..+|.+..
T Consensus 16 ~v-ikI~--Gq~~eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 16 IL-IFVN--GYPIKFLLDTGADITVLNR 40 (116)
T ss_dssp EE-EEET--TEEEEEEECTTCSSCEEEG
T ss_pred EE-EEEC--CEEEEEEecCCCCcEEEcc
Confidence 45 8899 8999999999999999964
No 47
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=73.37 E-value=3.9 Score=30.18 Aligned_cols=29 Identities=14% Similarity=0.085 Sum_probs=24.7
Q ss_pred EEEEEeCCCCcEEEEEEEcCCCceeEeCCCC
Q 045061 8 TVDVLFGTPSKSEFLLFDTGSYLIWTQCLPC 38 (359)
Q Consensus 8 ~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~~c 38 (359)
.+.+.|| .|.+.+++|||..+|.+.....
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~~l 39 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLEDW 39 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGGGS
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEecccC
Confidence 5678999 8999999999999999975443
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=71.38 E-value=5.4 Score=30.32 Aligned_cols=29 Identities=17% Similarity=0.080 Sum_probs=24.5
Q ss_pred eEEEEEEeCCCCcEEEEEEEcCCCceeEeCC
Q 045061 6 FYTVDVLFGTPSKSEFLLFDTGSYLIWTQCL 36 (359)
Q Consensus 6 ~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~~ 36 (359)
.-++.+.|+ .|.+.+++|||.+.+.+...
T Consensus 22 RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 22 EPRITLKVG--GQPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp SSEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CCEEEEEEC--CEEEEEEEeCCCCeEEEccc
Confidence 346778999 79999999999999999643
No 49
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=60.68 E-value=9.3 Score=28.63 Aligned_cols=24 Identities=17% Similarity=-0.018 Sum_probs=19.7
Q ss_pred eCCCCcEEEEEEEcCCCceeEeCCCC
Q 045061 13 FGTPSKSEFLLFDTGSYLIWTQCLPC 38 (359)
Q Consensus 13 iGtp~Q~~~l~~DTgS~~~wv~~~~c 38 (359)
+| .|.+.+++|||..++.+.....
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~l 50 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEEDW 50 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTTS
T ss_pred CC--CEEEEEEecCCCCcEEEecccC
Confidence 55 6778999999999999976443
No 50
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=60.19 E-value=8.2 Score=31.63 Aligned_cols=27 Identities=22% Similarity=0.155 Sum_probs=23.7
Q ss_pred EEEEEEeCCCCcEEEEEEEcCCCceeEeC
Q 045061 7 YTVDVLFGTPSKSEFLLFDTGSYLIWTQC 35 (359)
Q Consensus 7 y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~ 35 (359)
-.+.+.|| .|.+.+++|||.++|.+..
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIEE 35 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEec
Confidence 35789999 8999999999999999953
No 51
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=59.68 E-value=7.9 Score=27.53 Aligned_cols=18 Identities=17% Similarity=0.246 Sum_probs=15.6
Q ss_pred cEEEecCCcccccCchHH
Q 045061 229 GCMIDTGAIATFIQRGPY 246 (359)
Q Consensus 229 ~~iiDtGt~~~~lp~~~~ 246 (359)
.++||||++.+++|....
T Consensus 29 ~v~~DTGSs~lWv~~~~C 46 (97)
T 1lya_A 29 TVVFDTGSSNLWVPSIHC 46 (97)
T ss_dssp EEEEETTCCCEEEEBTTC
T ss_pred EEEEeCCCCceEEeEcCc
Confidence 599999999999997643
No 52
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=39.45 E-value=36 Score=27.79 Aligned_cols=26 Identities=23% Similarity=0.201 Sum_probs=22.9
Q ss_pred EEEEEeCCCCcEEEEEEEcCCCceeEeC
Q 045061 8 TVDVLFGTPSKSEFLLFDTGSYLIWTQC 35 (359)
Q Consensus 8 ~~~i~iGtp~Q~~~l~~DTgS~~~wv~~ 35 (359)
.+.+.+| .|.+.+++|||..++.+..
T Consensus 114 ~~~iki~--Gq~~e~LlDTGAD~TVl~~ 139 (203)
T 3ka2_A 114 LVTIRIG--GQLKEALLDTGADDTVIEE 139 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred cEEEEEC--CEEEeeeecccCCceeeec
Confidence 5678888 7999999999999999954
No 53
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=34.46 E-value=33 Score=30.00 Aligned_cols=18 Identities=17% Similarity=0.215 Sum_probs=15.6
Q ss_pred cEEEecCCcccccCchHH
Q 045061 229 GCMIDTGAIATFIQRGPY 246 (359)
Q Consensus 229 ~~iiDtGt~~~~lp~~~~ 246 (359)
.+++|||++.+++|....
T Consensus 30 ~v~~DTGSs~~Wv~~~~C 47 (323)
T 3cms_A 30 TVLFDTGSSDFWVPSIYC 47 (323)
T ss_dssp EEEEETTCCCEEEEBTTC
T ss_pred EEEEeCCccceEEcCCCC
Confidence 599999999999997644
No 54
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=32.53 E-value=42 Score=29.86 Aligned_cols=46 Identities=15% Similarity=0.192 Sum_probs=29.5
Q ss_pred CCceeeeeecCCCCcEEEEEeEEEECCEEeecCCCccccccCCCCcEEEecCCcccccCchH
Q 045061 184 KDMKTIRMFVDRSSHYYLSLQDISVADHRIGFAPGTFALRRNGTGGCMIDTGAIATFIQRGP 245 (359)
Q Consensus 184 ~~i~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDtGt~~~~lp~~~ 245 (359)
+.+...|+.......|.+ .|.||. |++. ..++||||++.+++|...
T Consensus 5 g~~~~~~l~~~~~~~Y~~---~i~iGt-----P~q~--------~~v~~DTGSs~~Wv~~~~ 50 (361)
T 1mpp_A 5 GSVDTPGLYDFDLEEYAI---PVSIGT-----PGQD--------FYLLFDTGSSDTWVPHKG 50 (361)
T ss_dssp CCEEEEEEEETTTTEEEE---EEEETT-----TTEE--------EEEEEETTCCCCEEEBTT
T ss_pred CccceEEeecCCCCEEEE---EEEECC-----CCcE--------EEEEEcCCCCCeEECCCC
Confidence 455566776532445655 456662 2322 259999999999999763
No 55
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=30.70 E-value=40 Score=29.57 Aligned_cols=33 Identities=21% Similarity=0.142 Sum_probs=24.7
Q ss_pred cceEEEE---EEeCC---CCcEEEEEEEcCCCceeEeCC
Q 045061 4 NYFYTVD---VLFGT---PSKSEFLLFDTGSYLIWTQCL 36 (359)
Q Consensus 4 ~~~y~~~---i~iGt---p~Q~~~l~~DTgS~~~wv~~~ 36 (359)
.++|.+. |.||. +.....+++|||+++++++..
T Consensus 192 ~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~ 230 (329)
T 3c9x_A 192 QGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDDN 230 (329)
T ss_dssp TSSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECHH
T ss_pred CceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCHH
Confidence 3456555 56775 346789999999999999764
No 56
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=28.98 E-value=57 Score=29.78 Aligned_cols=45 Identities=11% Similarity=0.095 Sum_probs=28.6
Q ss_pred CCceeeeeecCC-CCcEEEEEeEEEECCEEeecCCCccccccCCCCcEEEecCCcccccCch
Q 045061 184 KDMKTIRMFVDR-SSHYYLSLQDISVADHRIGFAPGTFALRRNGTGGCMIDTGAIATFIQRG 244 (359)
Q Consensus 184 ~~i~~~~~~~~~-~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDtGt~~~~lp~~ 244 (359)
..-..+|+..+. ...|.+ .|.|| .|+..+ .+++|||+.++|+|-.
T Consensus 6 ~~~~~~pv~~d~~~~~Y~~---~i~iG-----TPpq~~--------~v~~DTGS~~lWv~c~ 51 (413)
T 3vla_A 6 PSALVVPVKKDASTLQYVT---TINQR-----TPLVSE--------NLVVDLGGRFLWVDCD 51 (413)
T ss_dssp CSEEEEEEEECTTTCCEEE---EEEET-----TTTEEE--------EEEEETTCSSEEEECS
T ss_pred CccEEEEeeecCCCCeEEE---EEEcC-----CCCcce--------EEEEeCCChhhhcccC
Confidence 344557777754 334444 44555 334332 5999999999999964
No 57
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=28.35 E-value=39 Score=28.16 Aligned_cols=18 Identities=17% Similarity=0.370 Sum_probs=15.4
Q ss_pred cEEEecCCcccccCchHH
Q 045061 229 GCMIDTGAIATFIQRGPY 246 (359)
Q Consensus 229 ~~iiDtGt~~~~lp~~~~ 246 (359)
.++||||++.+++|....
T Consensus 29 ~v~~DTGSs~lWv~~~~C 46 (239)
T 1b5f_A 29 TVIFDTGSSVLWVPSSKC 46 (239)
T ss_dssp EEEEETTCCCEEEEBTTC
T ss_pred EEEEeCCCcceEEEcCCC
Confidence 599999999999987543
No 58
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=27.62 E-value=53 Score=28.71 Aligned_cols=19 Identities=16% Similarity=0.212 Sum_probs=16.4
Q ss_pred cEEEecCCcccccCchHHH
Q 045061 229 GCMIDTGAIATFIQRGPYE 247 (359)
Q Consensus 229 ~~iiDtGt~~~~lp~~~~~ 247 (359)
.++||||++.+++|.....
T Consensus 29 ~v~~DTGSs~lWv~~~~C~ 47 (323)
T 1bxo_A 29 NLNFDTGSADLWVFSTELP 47 (323)
T ss_dssp EEEEETTCCCEEECBTTSC
T ss_pred EEEEeCCCcceEEecCCCC
Confidence 5999999999999987553
No 59
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=27.61 E-value=54 Score=27.13 Aligned_cols=27 Identities=19% Similarity=0.132 Sum_probs=20.7
Q ss_pred EEEeCCC----CcEEEEEEEcCCCceeEeCC
Q 045061 10 DVLFGTP----SKSEFLLFDTGSYLIWTQCL 36 (359)
Q Consensus 10 ~i~iGtp----~Q~~~l~~DTgS~~~wv~~~ 36 (359)
.|.||.- .....+++|||++.++++..
T Consensus 107 ~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 107 QVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp EEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred EEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 4668752 35578999999999999763
No 60
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=26.52 E-value=57 Score=28.52 Aligned_cols=19 Identities=21% Similarity=0.305 Sum_probs=16.4
Q ss_pred cEEEecCCcccccCchHHH
Q 045061 229 GCMIDTGAIATFIQRGPYE 247 (359)
Q Consensus 229 ~~iiDtGt~~~~lp~~~~~ 247 (359)
.++||||++.+++|.....
T Consensus 29 ~v~~DTGSs~lWv~~~~C~ 47 (323)
T 1izd_A 29 GLDFDTGSADLWVFSSQTP 47 (323)
T ss_dssp EEEEETTCCCEEECBTTSC
T ss_pred EEEEcCCCcceEEecCCCC
Confidence 5999999999999987553
No 61
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=25.33 E-value=52 Score=28.79 Aligned_cols=19 Identities=16% Similarity=0.188 Sum_probs=16.3
Q ss_pred cEEEecCCcccccCchHHH
Q 045061 229 GCMIDTGAIATFIQRGPYE 247 (359)
Q Consensus 229 ~~iiDtGt~~~~lp~~~~~ 247 (359)
.+++|||++.+++|.....
T Consensus 28 ~v~~DTGSs~lWv~~~~C~ 46 (325)
T 1ibq_A 28 HLDFDTGSADLWVFSDELP 46 (325)
T ss_dssp EEEEETTCCCEEEECTTSC
T ss_pred EEEEeCCCccceEeeCCCC
Confidence 5999999999999986553
No 62
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=23.93 E-value=79 Score=20.69 Aligned_cols=32 Identities=22% Similarity=0.396 Sum_probs=24.5
Q ss_pred CCcceEEEEEEeCCCCcEEEEEEEcCCCceeEeC
Q 045061 2 EKNYFYTVDVLFGTPSKSEFLLFDTGSYLIWTQC 35 (359)
Q Consensus 2 ~~~~~y~~~i~iGtp~Q~~~l~~DTgS~~~wv~~ 35 (359)
.+..+|+++| |..-.|..-|.|+--|. .||.-
T Consensus 27 ~DG~fYLGtI-Vd~~~~~ClV~FeD~S~-~Wv~~ 58 (69)
T 2xk0_A 27 NDGRFYLGTI-IDQTSDQYLIRFDDQSE-QWCEP 58 (69)
T ss_dssp TTSCEEEEEE-EEECSSCEEEEETTCCE-EEECT
T ss_pred cCCCEEEEEE-EecCCceEEEEecCCcc-eeeeH
Confidence 4556778888 77778888899887776 68854
No 63
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=23.59 E-value=61 Score=28.26 Aligned_cols=18 Identities=17% Similarity=0.361 Sum_probs=15.7
Q ss_pred cEEEecCCcccccCchHH
Q 045061 229 GCMIDTGAIATFIQRGPY 246 (359)
Q Consensus 229 ~~iiDtGt~~~~lp~~~~ 246 (359)
.+++|||++.+++|....
T Consensus 28 ~v~~DTGSs~~Wv~~~~C 45 (324)
T 1am5_A 28 KVIFDTGSSNLWVSSSHC 45 (324)
T ss_dssp EEEEETTCCCEEECBTTC
T ss_pred EEEEeCCCcceEEecCCC
Confidence 599999999999998644
No 64
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=22.91 E-value=58 Score=28.57 Aligned_cols=17 Identities=6% Similarity=0.077 Sum_probs=15.0
Q ss_pred cEEEecCCcccccCchH
Q 045061 229 GCMIDTGAIATFIQRGP 245 (359)
Q Consensus 229 ~~iiDtGt~~~~lp~~~ 245 (359)
.++||||++.+++|...
T Consensus 31 ~v~~DTGSs~lWv~~~~ 47 (330)
T 1yg9_A 31 LTVFDSTSCNVVVASQE 47 (330)
T ss_dssp EEEEETTCCCEEEECTT
T ss_pred EEEEeCCCcceEEecCC
Confidence 59999999999999753
No 65
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=22.06 E-value=76 Score=27.76 Aligned_cols=18 Identities=17% Similarity=0.370 Sum_probs=15.5
Q ss_pred cEEEecCCcccccCchHH
Q 045061 229 GCMIDTGAIATFIQRGPY 246 (359)
Q Consensus 229 ~~iiDtGt~~~~lp~~~~ 246 (359)
.+++|||++.+++|....
T Consensus 34 ~v~~DTGSs~~Wv~~~~C 51 (341)
T 3k1w_A 34 KVVFDTGSSNVWVPSSKC 51 (341)
T ss_dssp EEEEETTCCCEEEEBTTS
T ss_pred EEEEeCCCcceEEccCCC
Confidence 599999999999997643
No 66
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=21.95 E-value=62 Score=28.36 Aligned_cols=16 Identities=25% Similarity=0.414 Sum_probs=14.3
Q ss_pred cEEEecCCcccccCch
Q 045061 229 GCMIDTGAIATFIQRG 244 (359)
Q Consensus 229 ~~iiDtGt~~~~lp~~ 244 (359)
.++||||++.+++|..
T Consensus 28 ~v~~DTGSs~~Wv~~~ 43 (334)
T 1j71_A 28 TVVIDTGSSDLWVVDT 43 (334)
T ss_dssp EEEEETTCCCEEEEEE
T ss_pred EEEEcCCCCCEEEecC
Confidence 5999999999999854
No 67
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=21.71 E-value=63 Score=28.32 Aligned_cols=16 Identities=25% Similarity=0.445 Sum_probs=14.3
Q ss_pred cEEEecCCcccccCch
Q 045061 229 GCMIDTGAIATFIQRG 244 (359)
Q Consensus 229 ~~iiDtGt~~~~lp~~ 244 (359)
.+++|||++.+++|..
T Consensus 28 ~v~~DTGSs~~Wv~~~ 43 (339)
T 3fv3_A 28 TVIIDTGSSDFWVVDS 43 (339)
T ss_dssp EEEEETTCCCEEEEEE
T ss_pred EEEEeCCCCceEEecC
Confidence 5999999999999854
No 68
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=21.01 E-value=73 Score=27.78 Aligned_cols=17 Identities=24% Similarity=0.241 Sum_probs=15.1
Q ss_pred cEEEecCCcccccCchH
Q 045061 229 GCMIDTGAIATFIQRGP 245 (359)
Q Consensus 229 ~~iiDtGt~~~~lp~~~ 245 (359)
.+++|||++.+++|...
T Consensus 31 ~v~~DTGSs~lWv~~~~ 47 (325)
T 2apr_A 31 NLDFDTGSSDLWIASTL 47 (325)
T ss_dssp EEEEETTCCCCEEEBTT
T ss_pred EEEEcCCCCCEEEccCC
Confidence 59999999999999764
Done!